LOCUS       DAXFZM010000001        53711 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.001, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000001 DAXFZM010000000
VERSION     DAXFZM010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 53711)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 53711)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..53711
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.001"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..2302)
                     /gene="rnr"
                     /locus_tag="ACFJAG_000001"
     CDS             complement(<1..2302)
                     /gene="rnr"
                     /locus_tag="ACFJAG_000001"
                     /EC_number="3.1.13.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HFC3979428.1"
                     /translation="MNKNIKSLNLREKDPFLSREKQRYEHPLPSREWIIELLERKGVP
                     SKIESLARELSITEDEYVFFERRLKAMARDGQVLINRRGAVCAADKLDLVKCRVEAHK
                     DGFGFAVPLMPMDEGDFVLYERQMRGVMHGDTVTVRPAGIDRRGRREGTVLDIVERAQ
                     SKVVGRFYMDRGVAILEPEDKRLNQSIVLEPDGVARFKPEFGQVIVGKIEVYPEQNRP
                     AVAKIIEVLGDYADSGMEIEIAVRKHHLPHRFSEACAKSAKKIPDHVRKSDLKGRVDL
                     CDLPLVTIDGETARDFDDAVFAEKVGRNYRLVVAIADVSHYVRPDDAIDADAQERSTS
                     VYFPRRMIPMLPENLSNGICSLNPDVERLCMVCDMVVTYAGNIKEYRFYPAVMRSHAR
                     LTYNQVWKWLSDGIGNPHKAQIDTLYKLFKILQKKRLARGAVEFESVETQMIFDDNGK
                     IEKIVPVVRNDAHKLIEECMLAANVCAADFLLKNKHTALFRNHLGPTPEKLATLREQL
                     GLLGLQLGGGDNPSPKDYAALAEQFKGRPDAELLQVMMLRSMQQAVYEPHCEGHFGLA
                     YEAYAHFTSPIRRYPDLTVHRAIKAVLNRKTYTPNKSWQALGVHTSFCERRADDAGRD
                     VENWLKTYYMRDKVGEIFEGKISGVANFGIFVTLDDIHIDGLVHISDLGEDYFNFRPE
                     IMAIEGERSGIRFNMGDRVAVRVARADLDDGKIDFVLIAGGSGRRRKVKLSASAKPAG
                     AAGKGKSKTTAEKKTARCGKVRGRGVP"
     gene            2391..2477
                     /locus_tag="ACFJAG_000002"
     tRNA            2391..2477
                     /locus_tag="ACFJAG_000002"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2425..2427,aa:Leu,seq:cag)
     gene            2516..2606
                     /locus_tag="ACFJAG_000003"
     tRNA            2516..2606
                     /locus_tag="ACFJAG_000003"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2550..2552,aa:Ser,seq:gga)
     gene            complement(3003..4814)
                     /gene="typA"
                     /locus_tag="ACFJAG_000004"
     CDS             complement(3003..4814)
                     /gene="typA"
                     /locus_tag="ACFJAG_000004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HFC3979429.1"
                     /translation="MKQIRNIAIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDS
                     NDLEKERGITILAKNTAIDYEGCHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQE
                     GPMPQTRFVTKKALALGLKPIVVINKIDKPSARPSWVIDQTFELFDNLGATDEQLDFP
                     IVYASGLSGFAKLEETDESSDMRPLFDTILKYTPAPSGSADEPLQLQISQLDYDNYTG
                     RLGIGRILNGRIKPGQTVAVMNHEQQIAQGRINQLLGFKGLERVPLEEAEAGDIVIIS
                     GIEDIGIGVTITDKDNPKGLPMLSVDEPTLTMDFMVNTSPLAGTEGKFVTSRQIRDRL
                     QKELLTNVALRVEDTADADVFRVSGRGELHLTILLENMRREGYELAVGKPRVVYRDID
                     GQKCEPYENLTVDVPDDNQGAVMEELGRRRGELTNMESDGNGRTRLEYHIPARGLIGF
                     QGEFMTLTRGVGLMSHVFDDYAPVKPDMPGRHNGVLVSQEQGEAVAYALWNLEDRGRM
                     FVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKKLTNIRASGTDEAVRLTTPIKLTLEGA
                     VEFIDDDELVEITPQSIRLRKRYLSELERRRHFKKLD"
     gene            complement(4931..5821)
                     /locus_tag="ACFJAG_000005"
     CDS             complement(4931..5821)
                     /locus_tag="ACFJAG_000005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HFC3979430.1"
                     /translation="MFPVFHLSGESRRRMLQTALRFPHVFKARAEDSHKGTFGTLAVV
                     GGSAGMSGAPVLAASAAMYLGCGKVRAGFNQDTLPFAVIAGFPEIMLDTADGLTKRQG
                     INAWTAGCGLGTDAAAVETVAAVLARNRDEAVVLDADALNILSTDAETRNLARGCKNL
                     ILTPHPAEAARLLGTTVAQVQADRTAAVRKIGAILGATVVLKGHKTLVAASDTEIYVN
                     ESGNAGLATAGSGDVLGGIIGSLLAQGVPVFEAACAGAWLHGAAADVIKESAGIAAGL
                     SAGEIAPAARWLRNWITESM"
     gene            5886..6542
                     /locus_tag="ACFJAG_000006"
     CDS             5886..6542
                     /locus_tag="ACFJAG_000006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HFC3979431.1"
                     /translation="MKNKTKVWDFPTRLFHWLLAASLPFMWYSAKAGGDMLQWHTRVG
                     LLVLFLLVFRLCWGIWGSDTARFSRFVRGWAGIRGYLKNGIPEHIQPGHNPLGALMVV
                     ALLAAVSFQVGTGLFAADENTFSTNGYLNHLVSEHTGSLIRKIHLNFFKLLAVFSAVH
                     IAAVAAYRIFKKKNLVRPMITGFKYIEGKTSIRFAGKAALAAALSVAALAAAAILLLS
                     "
     gene            6971..8053
                     /locus_tag="ACFJAG_000007"
     CDS             6971..8053
                     /locus_tag="ACFJAG_000007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HFC3979432.1"
                     /translation="MNYFPIFANLAGRPVLVVGGGAVAARKISLLLKAGAEVGVAAKH
                     LNAELSALAAENKILWLAKEFRAEHIRTVFLIIAASSDQALNRRVFHLAESCQKPVNV
                     VGDRDHCSFIFPSVIDRDPVQIAVSSSGSAPVLARLLRERLEALLPPSLGDMAEISGR
                     WRDAGFYFPVQLVVRQDADKADGFRGYQGRIERGSVTVGQTVRIEPNGLTAEVSEIIA
                     PKGEVAQAFAGEAATIRLDRDIDVSRGDLFVDKNFPLAPQKHPEATLCWFDERPLNTA
                     RKYLLKHGTQTVPAKVGEIESVLDVRTLEQEAGAESLKMNDIAKVRINLQKPVTATPY
                     AENTAAGSFILIDEATYGTVAAGMIL"
     gene            8050..9843
                     /locus_tag="ACFJAG_000008"
                     /pseudo
     CDS             8050..9843
                     /locus_tag="ACFJAG_000008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232452.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0009337 - sulfite reductase complex
                     (NADPH) [Evidence IEA];
                     GO_function: GO:0004783 - sulfite reductase (NADPH)
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA];
                     GO_process: GO:0019344 - cysteine biosynthetic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="assimilatory sulfite reductase (NADPH)
                     flavoprotein subunit"
     gene            9870..11635
                     /gene="cysI"
                     /locus_tag="ACFJAG_000009"
                     /pseudo
     CDS             9870..11635
                     /gene="cysI"
                     /locus_tag="ACFJAG_000009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251317.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0009337 - sulfite reductase complex
                     (NADPH) [Evidence IEA];
                     GO_function: GO:0004783 - sulfite reductase (NADPH)
                     activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0000103 - sulfate assimilation [Evidence
                     IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="assimilatory sulfite reductase (NADPH)
                     hemoprotein subunit"
     gene            11808..13667
                     /gene="ilvD"
                     /locus_tag="ACFJAG_000010"
     CDS             11808..13667
                     /gene="ilvD"
                     /locus_tag="ACFJAG_000010"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004160 - dihydroxy-acid dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HFC3979433.1"
                     /translation="MPEYRSKTSTHGRNMAGARALWRATGVMETDFGKPIIAVANSFT
                     QFVPGHVHLHNMGQLVAREIEKAGAIAKEFNTIAIDDGIAMGHSGMLYSLPSRDLIAD
                     SIEYMVNAHCADALVCISNCDKITPGMLIAAMRLNIPTIFVSGGPMEAGKVIGVANIQ
                     PERRLDLIDAMIESADDNVSNRQVEEVEQNACPTCGSCSGMFTANSMNCLTEALGLSL
                     PGNGSYLATHAGRKELFLEAGRMIVEITKRYYEQDDETVLPRSIATKKAFENAMTMDI
                     AMGGSTNTILHLLAVANEAGVDFKMADIDRLSRVVPCICKTAPNNHDYYMEDVHRAGG
                     IFAILKELDKAGKLHTDVYTIHAPTLKDAIEKWDVTNPENTRAIERFKAAPGGVRTTQ
                     AFSQNRIWKTLDLDREKGCIRDVAHAYSQDGGLAVLFGNIAERGCVVKTAGVDESILK
                     FTGRARVFESQEAAVEGILGNQIVAGNIVIIRYEGPKGGPGMQEMLYPTSYLKSKGLG
                     KACALLTDGRFSGGTSGLSIGHASPEAAEGGAIGLVHEGDTIEIDIPKRSIRLVISDE
                     ELAARRAEMEARGSKAWKPENRDRYVSAALRAYGAMATSADKGAVRDVSQIER"
     gene            complement(13927..14163)
                     /locus_tag="ACFJAG_000011"
     CDS             complement(13927..14163)
                     /locus_tag="ACFJAG_000011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979434.1"
                     /translation="MVCTFFRRTAFVKQRTFKVADGNVRIFQDGFDVFQDIGIGRVID
                     RIIAAEHNAADPDDGNGICCLSVRRILSVRIAGV"
     gene            14153..14926
                     /locus_tag="ACFJAG_000012"
     CDS             14153..14926
                     /locus_tag="ACFJAG_000012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017147059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HFC3979435.1"
                     /translation="MQTTKICYAFRTPSAYGQYLADAGFDYLSLANNHSNGFGAQGIT
                     ATAGNLDELNIKYSGIENRFETAILKKNGVRYGFVSFAPNLAAVKLNDYAKFKKLIRK
                     TKQKTDIVIVMFHGGAEGKQAEHLPFDTEIFYGENRGNVVEFARLAVDSGADVVFGQG
                     AHVTRAVELYHDRFISYSGGNFATYGISGIAPIFKIITDKQGRFVSGNIIPITQVGDK
                     IPKIDPEKTVIERIIYLNHSDFPNGNGLDVSPGGDITRR"
     gene            complement(15004..16056)
                     /gene="bioB"
                     /locus_tag="ACFJAG_000013"
     CDS             complement(15004..16056)
                     /gene="bioB"
                     /locus_tag="ACFJAG_000013"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004076 - biotin synthase activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase BioB"
                     /protein_id="HFC3979436.1"
                     /translation="MTVSPVALRRKTECKPHPTARYWKKCDVEALFGLPFLELVYQAA
                     EVHRQNFNPREIQLSTLLSIKTGGCPEDCAYCPQSAHHNTNLGKEQMMDVDEIVEKAK
                     IAKSRGASRFCMGAAWRGPKPKDVETVSAIIKAVKGLGMETCGTFGMLEEGMAEDLKE
                     AGLDYYNHNLDTDPDRYNDIIHTRRHEDRMDTLGKVRNAGLKVCCGGIVGMNETRAER
                     AGLIASLANLDPQPESVPINRLVKVEGTPLADAEDLDWTEFVRTVSVARITMPQSYVR
                     LSAGRSNMPEAMQAMCFMAGANSIFYGDKLLTTGNPDEDGDRILMEKLNLYPLQFEPE
                     GEVAEVEKASGIKADY"
     gene            complement(16263..17639)
                     /gene="mpl"
                     /locus_tag="ACFJAG_000014"
     CDS             complement(16263..17639)
                     /gene="mpl"
                     /locus_tag="ACFJAG_000014"
                     /EC_number="6.3.2.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-
                     meso-diaminopimelate ligase"
                     /protein_id="HFC3979437.1"
                     /translation="MKHIHIIGIGGTFMGGIAAIAKEAGFKVSGCDAKMYPPMSTQLE
                     ALGIGVHEGFDAAQLEEFQADIYVIGNVARRGMDVVEAILNRGLPYISGPQWLAENVL
                     HHHWVLGVAGTHGKTTTASMLAWVLEYAGLAPGFLIGGVPENFGVSARLPQTPRQDPN
                     SKSPFFVIEADEYDTAFFDKRSKFVHYRPRTAVLNNLEFDHADIFADLGAIQTQFHHL
                     VRTVPSEGLIVCNGQQQSLQDTLDKGCWTPVEKFGTGHGWQIGEVNADGSFDVLLDGK
                     KAGHVAWDLMGGHNRMNALAVIAAARHAGVDVQTACEALGAFKNVKRRMEIKGTANGI
                     TVYDDFAHHPTAIETTIQGLRQRVGGARILAVLEPRSNTMKLGTMKSALPASLKEADQ
                     VFCYAGGADWDVAEALAPLGCRLRVGKDFDTFVAEIVKNARTGDHILVMSNGGFGGIH
                     TKLLDALR"
     gene            complement(17701..18006)
                     /locus_tag="ACFJAG_000015"
     CDS             complement(17701..18006)
                     /locus_tag="ACFJAG_000015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4124 domain-containing protein"
                     /protein_id="HFC3979438.1"
                     /translation="MRVSKMIGSILLVAAVQTVFSANVYECRHNGKTSYSQTPGKDCT
                     NAGLGRDRVYSSVRPAVKDRAEDAGVGDYSDTVRDEAVQNPKGNAQKDGSDAGIRPH"
     gene            complement(18018..18371)
                     /locus_tag="ACFJAG_000016"
     CDS             complement(18018..18371)
                     /locus_tag="ACFJAG_000016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979439.1"
                     /translation="MKNCEFFYDPTRAIYDSSADYLTREKHRLVVIANSAWGLLLNLP
                     CYYDEVLEKRKIPFGKQEIDDDMDKVSALKRKFKDISEIKVGDGWEYPFNYEQGMKEL
                     DEVLLKYIPFFEEEQ"
     gene            complement(18633..18830)
                     /locus_tag="ACFJAG_000017"
     CDS             complement(18633..18830)
                     /locus_tag="ACFJAG_000017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979440.1"
                     /translation="MPSEKIYYGVLIFLCIASMLLSPFFYAGALKPKKAALRKDGQWK
                     LILSSNAVAAAVLFWIWWKWF"
     gene            complement(18840..19625)
                     /locus_tag="ACFJAG_000018"
     CDS             complement(18840..19625)
                     /locus_tag="ACFJAG_000018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0001510 - RNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrmH family RNA methyltransferase"
                     /protein_id="HFC3979441.1"
                     /translation="MKHISSTNNEHIRHLHRLLSQGKFRRQYAQTVLEGVHLLQVFLQ
                     SGRKPVGVYIPEAKMPSEEVLKLTAVLPEDGIFSVSDGILKKISSLSCADEILTLIDI
                     PLGGTLPDKGDCAVLDGVQDPGNVGTVLRSAAAAGVGTVVLGRGCADAWSPKVLRAGM
                     GAHFLLDIYSQADLEIWLAHYEDRVFATALREEKQAVLYGEDLCEPTAWVFGNEGAGV
                     GKAVLDRADKCVRIPMHDATESLNVAMAATICLFEQMRQRAAY"
     gene            complement(19699..21009)
                     /gene="tilS"
                     /locus_tag="ACFJAG_000019"
     CDS             complement(19699..21009)
                     /gene="tilS"
                     /locus_tag="ACFJAG_000019"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016879 - ligase activity, forming
                     carbon-nitrogen bonds [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HFC3979442.1"
                     /translation="MLTLDAFEQCLKDCFPQGLNGKKTAVALSGGLDSVVLLHLLVCA
                     GKRAGFVPEALHIHHGLSPRADDWADFCRNYCDMLGVGLETVKVCVEKNGLGIEAAAR
                     QKRYAEFAEKGFDVLALAHHRDDQIETFMLAVARGGGLRALAAMPAVRPLGENGIIWR
                     PLLPFSRQDIWDYARKHGLPNIEDESNTDTAYLRNRFRHRILPELSAQIPHFGRHVLN
                     NVRALQEDLALLEEVVVQDCRWVCGAGYFDTARWLTFSPRRKTHILRNFLKENGIPVP
                     NQNALADIARVLTEAKTGRWNLQGFELHHYAGRLFVFASEQLAKPAFLKDGTISGNLK
                     KILTEHRFVLKRHPFGLPEAMLEQDGILRTVAASDTLAVGGIHKNVKKILQGKRVLPF
                     LRPIWPLVADSGNRPLALANCCADFQISVSDGILPVHPDFPILF"
     gene            complement(21077..22036)
                     /locus_tag="ACFJAG_000020"
     CDS             complement(21077..22036)
                     /locus_tag="ACFJAG_000020"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit alpha"
                     /protein_id="HFC3979443.1"
                     /translation="MKPVFLDFEQPIAELTNKIDELRFVQDESAVDISDEIHRLQKKS
                     NDLTKSIFSKLTPAQISQVSRHPQRPYTLDYIDALFTDFEELHGDRHFADDHAIVGGL
                     ARFNGQSVVVVGHQKGRDTKEKIRRNFGMLRPEGYRKALRLMKTAEKFGLPVMTFIDT
                     PGAYPGIGAEERGQSEAIGKNLYELTRLRVPVLCTVIGEGGSGGALAVAVGDYVNMLQ
                     YSTYSVISPEGCASILWKTAEKAADAAQALGITADRLQKLDLVDTVIKEPLGGAHRDF
                     GQTMKNVKAVLEKQLHEAQSIPLADLLSRRFDRIMAYGKFSEQ"
     gene            22248..22649
                     /locus_tag="ACFJAG_000021"
     CDS             22248..22649
                     /locus_tag="ACFJAG_000021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HFC3979444.1"
                     /translation="MKDKHDSSAMRLDKWLWAARFFKTRSLAQKHIELGRVQVNGSKV
                     KNSKTIDIGDIIDLTLNSLPHKIKVKGLNHQRRPAPEARLLYEEDAKTAALREECKQL
                     DQFSRITSAHPDGRPTKRDRRQLDRLKKGDW"
     gene            complement(22717..22914)
                     /gene="iscX"
                     /locus_tag="ACFJAG_000022"
     CDS             complement(22717..22914)
                     /gene="iscX"
                     /locus_tag="ACFJAG_000022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein IscX"
                     /protein_id="HFC3979445.1"
                     /translation="MKWTDTRRIAEELYDLHGEAIDPKTVRFTQLRDLIMALPEFDDD
                     PARCGERILEAVQQAWIDEAE"
     gene            23127..23667
                     /locus_tag="ACFJAG_000023"
                     /pseudo
     CDS             23127..23667
                     /locus_tag="ACFJAG_000023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628869.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
     gene            complement(23727..24068)
                     /gene="fdx"
                     /locus_tag="ACFJAG_000024"
     CDS             complement(23727..24068)
                     /gene="fdx"
                     /locus_tag="ACFJAG_000024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009425374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISC system 2Fe-2S type ferredoxin"
                     /protein_id="HFC3979446.1"
                     /translation="MPKITVLPHATLCPEGAVIDNAPEGKTVLDVLLDHDIEVDHACE
                     KSCACTTCHVIIRKGFDSLEEPAELEEDLLDQAWGLEADSRLSCQAVVAGEDLIVEIP
                     KYTINHAREEH"
     gene            complement(24124..24876)
                     /locus_tag="ACFJAG_000025"
     CDS             complement(24124..24876)
                     /locus_tag="ACFJAG_000025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2314 domain-containing protein"
                     /protein_id="HFC3979447.1"
                     /translation="MMGDSVIYYVEQADEPVNRAGERARKTFKYFWRELFWERRRIIS
                     ALDFAMVKVPFFQDGEICEHMWIDDIYFDGLYIYGVLNNEPGGLTNVEQGESVCVPVG
                     DISDWMFVCNGIPYGGFTVQAMRGQMTEEERTEHDTAWGIDFGDPGQVLPVYEEKEHP
                     ENLEEHPMCRNCIDDFRQQLSQNPDFLHEQDEDGYTPLHHEAMAGNALMVQAMLEYGA
                     NPASKTSEGYTALDFARLTGWQNVADLLEPRH"
     gene            complement(24912..25560)
                     /locus_tag="ACFJAG_000026"
                     /pseudo
     CDS             complement(24912..25560)
                     /locus_tag="ACFJAG_000026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213572.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
     gene            complement(25746..27608)
                     /gene="hscA"
                     /locus_tag="ACFJAG_000027"
     CDS             complement(25746..27608)
                     /gene="hscA"
                     /locus_tag="ACFJAG_000027"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly chaperone HscA"
                     /protein_id="HFC3979448.1"
                     /translation="MALLQISEPGMSAAPHRHRLAAGIDLGTTNSLVATVRSGSAACL
                     PDADGRVTLPSVVRYLENGGIEVGKTALSAQKTDPLNTVSSAKRLIGRTLADLHQNTH
                     YLPYRFGDNQRFIELHTRQGVKTPVEVSAEILKTLKLRAEETLGGDLVGVVITVPAYF
                     DDAQRQATKDAARLAGLNVLRLLNEPTAAAIAYGLDNASEGTFVVYDLGGGTFDVSVL
                     QLTKGLFEVKATGGNSALGGDDFDHRLFCYLLEQNRLSQLNEQDSQLLLSLVRAAKEQ
                     LTTQTEARIQATLSDGMAIDTSISRAEFHNLTQHLVMKTLEPVKQALKDAGVGKNEVK
                     GVVMVGGSTRMPHVQQAVATFFGQTPLNNLNPDEVVALGAAIQANVLAGNKADGEWLL
                     LDVTPLSLGLETYGGLAEKIIPRNSTIPTARAQDFTTFKDGQTAMTIHVVQGERELVS
                     DCRSLAKFTLRGIPPMAAGAARIRVTFQIDADGLLSVSAQEQSTGVQAQIEVKPSYGL
                     DDDTITQMLKDSMGNAAEDMAARARAEAVVEAESLTDAVNAALELDSDLLDAEEFAQI
                     QRDIADLQGRLKDGKAEDIRAAVAKLSRSTDNFAAKRMNRNIQRALTGQSVDNI"
     gene            27779..28651
                     /gene="hpnD"
                     /locus_tag="ACFJAG_000028"
     CDS             27779..28651
                     /gene="hpnD"
                     /locus_tag="ACFJAG_000028"
                     /EC_number="2.5.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016767 - geranylgeranyl-diphosphate
                     geranylgeranyltransferase activity [Evidence IEA];
                     GO_process: GO:0016117 - carotenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="presqualene diphosphate synthase HpnD"
                     /protein_id="HFC3979449.1"
                     /translation="MKGLDYCRQKAEESRSSFLSGFRFLTQEKQDAVTVLYAFCRELD
                     DVVDECSNPDVAQATLNWWRGDLDNAFGGAMPEHPVNQALRQVKETFKLPKYELEALI
                     DGMQMDLVQARYGSFEELKLYCRRVAGVVGCLIARILGFSDGKTLEYADKMGLALQLT
                     NIIRDVGEDARRGRIYLPMEEMQRFDVPASVILQCSPTGNFAELMAFQIKRARETYRE
                     AVSLLPDADKKAQKVGLVMAAVYYALLNEIDRDGAQNVLKYKIALPSPRKKRIALKTW
                     LFGFKPRPGTPERA"
     gene            28726..30039
                     /gene="hpnE"
                     /locus_tag="ACFJAG_000029"
     CDS             28726..30039
                     /gene="hpnE"
                     /locus_tag="ACFJAG_000029"
                     /EC_number="1.17.8.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxysqualene dehydroxylase HpnE"
                     /protein_id="HFC3979450.1"
                     /translation="MMNTPHPRPKIAVIGAGWAGLSAAVTLARHADVTLFEAGRQAGG
                     RARTLAGNTDGFGFLDNGQHILLGAYRGVLRLMKTIGSDPRAAFLRVPLHWHMHGGLQ
                     FRALPLPAPLHILGGVLLARRVPSAFKAKLLADMSDLQKSARLGQPDTTVAQWLKQRN
                     VPRAAVMQFWQPLVWGALNTPLETASLRVLCNVLSDGVLTKKSGSDYLLPKQDLGAIV
                     AEPALAELQRLGADIRLETRVCRLNTLPDGKVLVNGEAFDAAILATAPYHAAALLPEG
                     TPEHVQTAYQNLRYHAITTVYLRYAEPVRLPAPLTGIADGTAQWLLCRGRLGLPENEI
                     SAVISVSDRVGAFANRAWADKAHADLRRILPHLGEPEAVRVITEKRATTATDAPPPDL
                     SWLHRHRIFPAGDYLHPHYPATLEAAVQSGFASAEACLQSLNDAV"
     gene            30121..30840
                     /locus_tag="ACFJAG_000030"
     CDS             30121..30840
                     /locus_tag="ACFJAG_000030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HFC3979451.1"
                     /translation="MPTLTDKTILVTGASQGLGEQVAKAYAAEGATVILVARHQKKLE
                     KAYDAIVEAGHPEPFAIRFDLMSAEEKEFERFAATIAEATQGKLDGIVHCAGYFYALS
                     PLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGF
                     GASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPGEAGSERKSYGDVL
                     PAFVWWASAESKGRSGEIVYL"
     gene            31006..31677
                     /locus_tag="ACFJAG_000031"
     CDS             31006..31677
                     /locus_tag="ACFJAG_000031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsgG/HfaB family protein"
                     /protein_id="HFC3979452.1"
                     /translation="MKTVSAAIAFAAAAVSLTGCATESSRSLEVAKVASCNTQYHGVR
                     TPISVGTFDNRSSFQKGIFSDSEDRLGSQAKTILVTHLQQTNRFNVLNRTNLSALKQE
                     SGISGKAQNLKGADYVVTGDVTEFGRRDVGDHQLFGILGRGKSQTAYAKVALNIVNVN
                     TSEIVYSTQGAGEYALSNREIIGFGGTSGYDATLNGKVLDLAIREAVDNLVQAVDNGA
                     WQSNR"
     gene            31687..32054
                     /locus_tag="ACFJAG_000032"
                     /pseudo
     CDS             31687..32054
                     /locus_tag="ACFJAG_000032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234874.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4810 domain-containing protein"
     gene            32051..32698
                     /locus_tag="ACFJAG_000033"
     CDS             32051..32698
                     /locus_tag="ACFJAG_000033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF799 domain-containing protein"
                     /protein_id="HFC3979453.1"
                     /translation="MKPLILGLAAVLALSACQVRKAPDLDYTSFKESKPASILVVPPL
                     NESPDVNGTWGMLASTAAPISEAGYYVFPAAVVEETFKENGLTNAADIHAVRPEKLHQ
                     IFGNDAVLYITVTEYGTSYQILDSVTTVSAKARLVDSRNGKELWSGSASIREGSNNSN
                     SGLLGALVGAVVNQIANSLTDRGYQVSKTAAYNLLSPYSRNGILKGPRFVEEQPK"
     gene            33091..34857
                     /locus_tag="ACFJAG_000034"
                     /pseudo
     CDS             33091..34857
                     /locus_tag="ACFJAG_000034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707572.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
     gene            34961..35629
                     /gene="hda"
                     /locus_tag="ACFJAG_000035"
     CDS             34961..35629
                     /gene="hda"
                     /locus_tag="ACFJAG_000035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA regulatory inactivator Hda"
                     /protein_id="HFC3979454.1"
                     /translation="MNQLIFDFAAHDYPSFDKFLGTENAELVYVLQHKHDPFIYVWGE
                     EGAGKSHLLQAWVAQALEAGKNAAYIDAASMPLTDAAFEAEYLAVDQVEKLGNEEQAL
                     LFSIFNRFRNSGKGFLLLGSEYTPQQLVIREDLRTRMAYCLVYEVKPLTDQEKIDALA
                     NMAAARQVTVDSEIFEYLLKHWRRDMDSLMMMLDTLDNYAVTMGKRITLPLLRQLLKQ
                     QETQ"
     gene            35626..36294
                     /locus_tag="ACFJAG_000036"
     CDS             35626..36294
                     /locus_tag="ACFJAG_000036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HFC3979455.1"
                     /translation="MKNLAIFDLDNTLINTDSDHAWPQYLIKKGLVDAAETEAQNEKF
                     YRDYQNGCLDIDAFLKLHLAPLARYSKEELAEFHREFMAEYIIPHISPMQRMLVQSHQ
                     MAGDETLVISSTNEFIITPVCRLFGIANMIGTQLETGPDGRYTGNYIGTPSLKEGKIT
                     RLNQWLAERGETLESYGKTYFYSDSKNDLPLLRLVSEPVAVNPDAELEKEAKEKGWPV
                     LNFK"
     gene            36299..36586
                     /locus_tag="ACFJAG_000037"
     CDS             36299..36586
                     /locus_tag="ACFJAG_000037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquitin-activating enzyme"
                     /protein_id="HFC3979456.1"
                     /translation="MPSEARFGVQTALRLKSQKPKATGIHPEKQKTQEFIGKNNNLST
                     VIPTKVGILIRPHGNLYFVIPPIPHHLYRFKSAQKSTSRHSHESGNLGRKI"
     gene            complement(36885..37781)
                     /gene="argB"
                     /locus_tag="ACFJAG_000038"
     CDS             complement(36885..37781)
                     /gene="argB"
                     /locus_tag="ACFJAG_000038"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003991 - acetylglutamate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HFC3979457.1"
                     /translation="MEFENIISAADKARILAEALPYIRRFSGSVAVIKYGGNAMTEPA
                     LKEGFARDVVLLKLVGIHPVIVHGGGPQINAMLEKVGKKGEFVQGMRVTDKETMDIVE
                     MVLGGHVNKEIVSMINTYGGHAVGVSGRDDHFIKAKKLLVDTPEQNSVDIGQVGTVES
                     IDTGLVKGLIERGCIPVVAPVGVGEKGEAFNINADLVAGKLAEELNAEKLLMMTNIAG
                     VMDKTGNLLTKLTPKRIDGLIADGTLYGGMLPKIASAVEAAANGVKATHIIDGRVPNA
                     LLLEIFTDAGIGSMILGRGEDA"
     gene            37951..39081
                     /locus_tag="ACFJAG_000039"
     CDS             37951..39081
                     /locus_tag="ACFJAG_000039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M14-type cytosolic carboxypeptidase"
                     /protein_id="HFC3979458.1"
                     /translation="MIKISTRFDAGSVVVKDLTDPSNIRLALRPDNASDFAQWFYFRL
                     QGAAYQNCIMHFENAAEAAYPKGWEGYQACASYDRRNWFRVPTSYENGVLTVNHTPLS
                     NSVYYAYFEPYSEEQHLNLLGDAQGSGLCRIDDLGSTVQGRDINLLTIGNQVESDMKI
                     WITARQHPGETMAEWFVEGLLGRLLDSQDPTARTLLDRATFYIVPNMNPDGSALGNLR
                     TNAAGANLNREWENPTLEKSPEVFFVRGKMLETGVDLFLDIHGDEGLPFVFVAGTEGV
                     PNYNPRISALEAQFKTALLNASPDFQDEYGYEKDAPGKANMTLATNWVGNRFNCLAYT
                     LEMPFKDNANLPDDDFGWNGQRSLRLGEAVLSAILNVAGDLR"
     gene            39155..40006
                     /gene="lgt"
                     /locus_tag="ACFJAG_000040"
     CDS             39155..40006
                     /gene="lgt"
                     /locus_tag="ACFJAG_000040"
                     /EC_number="2.5.1.145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HFC3979459.1"
                     /translation="MIIHHQFDPVLISIGPLAVRWYALSYILGFILFTFLGRRRIAQG
                     LSVFTKESLDDFLTWGILGVILGGRLGYVLFYKFSDYLAHPLDIFKVWEGGMSFHGGF
                     LGVVIAIWLFSRKHGIGFLKLMDTVAPLVPLGLASGRIGNFINGELWGRITDINAFWA
                     MGFPQAHYEDAEAAAHNPLWAEWLQQYGMLPRHPSQLYQFALEGICLFAVVWLFSKKP
                     RPTGQTAALFLGGYGVFRFIAEFARQPDDYLGLLTLGLSMGQWLSVPMIVLGIVGFVR
                     FGMKKQH"
     gene            complement(40091..40753)
                     /locus_tag="ACFJAG_000041"
     CDS             complement(40091..40753)
                     /locus_tag="ACFJAG_000041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0149 family protein"
                     /protein_id="HFC3979460.1"
                     /translation="MDSRKFTEASKRRLGELLDAKSEQGNTMRCDEVQGFMTALLSGP
                     DKLAPLDWLPEVLGDESQFTAAERSEIERLVLAMAMETTAAMSDKKLPDLWLYDDGEG
                     GSDFYTWCNAYLYGLDIVPTDWFEAADDEAFEELFYPVMALGGIYDEEENGAIRLQFT
                     EGELAELASELPYALADIYRYWQAVINKPQTVRREGEKTGRNDPCPCGSGRKYKACCG
                     KN"
     gene            40787..40893
                     /locus_tag="ACFJAG_000042"
                     /pseudo
     CDS             40787..40893
                     /locus_tag="ACFJAG_000042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(40952..42745)
                     /locus_tag="ACFJAG_000043"
     CDS             complement(40952..42745)
                     /locus_tag="ACFJAG_000043"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003852 - 2-isopropylmalate synthase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HFC3979461.1"
                     /translation="MQLDIDRLVAYFGGVNALAEALKRHDPENAATTAAIYKWRTRGS
                     LPLAQLQKLTALAESQGRPLDLNAFLQKNESLERTEMTQANRVIIFDTTLRDGEQSPG
                     AAMTKEEKIRVARQLEKLGADIIEAGFAAASPGDFEAVNAIAKTITKSTVCSLSRAIE
                     RDIRQAGKAVAPAPKKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDV
                     EFSCEDALRSQIDFLAEICGAVIEAGATTINIPDTVGYSIPYKTEEFFRELIAKTPNG
                     GKVVWSAHCHNDLGLAVANSLAALKGGARQVECTVNGLGERAGNASVEEIVMALKVRH
                     DLFGLETGIDTTQIVPSSKLVSTITGYPVQPNKAIVGANAFSHESGIHQDGVLKHRET
                     YEIMSAESVGWSANRLSLGKLSGRNAFKTKLADLGIELESEEALNAAFARFKELADKK
                     REIFDEDLHALVSDEMGNMNAESYKFISQKISTETGEEPRADIVFGIKGEEKRASATG
                     SGPVDAIFKAIESVAQSGATLQIYSVNAVTQGTESQGETSVRLARGNRVANGQGADTD
                     ILAATAKAYLSALSKLEFSAAKPKAQGSGTI"
     gene            42991..44100
                     /gene="proB"
                     /locus_tag="ACFJAG_000044"
     CDS             42991..44100
                     /gene="proB"
                     /locus_tag="ACFJAG_000044"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004349 - glutamate 5-kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HFC3979462.1"
                     /translation="MKYKRIVFKVGTSSITRSDGSLSRGKIQTITRQLAALHHAGHEL
                     VLVSSGAVAAGFGALGFKKRPVKIADKQASAAVGQGLLMEEYTANLSSDGIVSAQILL
                     SRADFADKRRYQNAGGALSVLLQRRAIPIINENDTVSVEELKIGDNDTLSAQVAAMIQ
                     ADLLVLLTDIDGLYTGNPNSNPDAVRLDKIEHINHEIIEMAGGSGSANGTGGMLTKIK
                     AATIAAESGVPVYICSSLKPDSLAEAAEHQADGSFFVPRAKGLRTQKQWLAFYSESRG
                     GVYVDEGAEHALSEQGKSLLMSGIAGIEGHFSRMDTVTVYSKATKQPLGKGRVLFGSA
                     AAEDLLKSRKAKGVFIHRDDWISITPEIRLLLTEF"
     gene            44113..45375
                     /locus_tag="ACFJAG_000045"
     CDS             44113..45375
                     /locus_tag="ACFJAG_000045"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004350 - glutamate-5-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HFC3979463.1"
                     /translation="MSNTQKQLALAKAAKKSVNTADAEEKNRALLAMADSLEAAAEDI
                     LAANRLDLKAAAGKIPDSMTDRLLLDGKRICAMADGIRAVAALPDPVGEILETSTLPN
                     GLEIVKKRVAMGVIGIIYESRPNVTSDAAALALKSGSAVVLRSGKDAFQSARAIVAAL
                     KTGLAQTRIDPEAVQLIEDTGREGSYEMMRAKDYLDLLIPRGGAGLIRAVVENAVVPV
                     IETGTGIVHIYIDKDADWDKALRIVYNAKTGRPSVCNSMEVLLVHEGIAADFLPKLER
                     LLVRGRIEAGLPPVRFRLDPQAARYIGGEAAGADDFDTEFLDYILAVKTVASVEEAVG
                     HIEARGTHHSDGIVTENRHAADYFTTHIDSAAVYINASTRFTDGGEFGLGCEMGISTQ
                     KLHARGPIGLKELTSYKYIVQGTGQVRE"
     gene            complement(45551..48595)
                     /locus_tag="ACFJAG_000046"
     CDS             complement(45551..48595)
                     /locus_tag="ACFJAG_000046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015616 - DNA translocase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HFC3979464.1"
                     /translation="MFWIVLIVILLLALAGLFFVRAQSEREWMREVSAWQEKKGEKQA
                     ELPEIKDGMPDFPEFSLMLFHAVKTAVYWLFVGVVRFCRNYLAHESEPDRPVPPASAN
                     RADVPTASDGYSDSGNGTEEAETEAAEAAEEEAADTEDIATAVIDNRRIPFDRSIAEG
                     LMQSESKTSPVRPVFKEITLEEATRALSSAALRETKKRYIDAFEKNGTAVPKVRVSDT
                     PMEGLQIIGLDDPVLQRTYSRMFDADKEAFSESADYGFEPYFEKQHPSAFSAVKAENA
                     RNAPFRRHAGQEKGQAEAKSPDVSQGQSVSDGTAVRDARRRVSVNLKEPNKATVSAEA
                     RISRLIPESRTVVGKRDVEMPSETENVFTETVSSVGYGGPVYDEAADIHIEEPAAPDA
                     WVVEPPEVPEVAVPEIDILPPPPVSEIYNRTYEPPAGFEQAQRSRIAETDHLAADVLN
                     GGWQEETAAIADDGSEGAAERSSGQYLSETEAFGHDSQAVCPFEDVPSERPSCRVSDT
                     EADEGAFQSEETGAVSEHLPTTDLLLPPLFNPEATQTEEELLENSITIEEKLAEFKVK
                     VKVVDSYSGPVITRYEIEPDVGVRGNSVLNLEKDLARSLGVASIRVVETIPGKTCMGL
                     ELPNPKRQMIRLSEIFNSPEFAESKSKLTLALGQDITGQPVVTDLGKAPHLLVAGTTG
                     SGKSVGVNAMILSMLFKAAPEDVRMIMIDPKMLELSIYEGITHLLAPVVTDMKLAANA
                     LNWCVNEMEKRYRLMSFMGVRNLAGFNQKTAEAAARGEKIGNPFSLTPDDPEPLEKLP
                     FIVVVVDEFADLMMTAGKKIEELIARLAQKARAAGIHLILATQRPSVDVITGLIKANI
                     PTRIAFQVSSKIDSRTILDQMGAENLLGQGDMLFLPPGTAYPQRVHGAFASDEEVHRV
                     VEYLKQFGEPDYVDDILSGGGSEELPGIGRSGDGETDPMYDEAVSVVLKTRKASISGV
                     QRALRIGYNRAARLIDQMEAEGIVSAPEHNGNRTILVPLDNA"
     gene            48760..49440
                     /locus_tag="ACFJAG_000047"
     CDS             48760..49440
                     /locus_tag="ACFJAG_000047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979465.1"
                     /translation="MIFQTVWFSDVVLSVSWIVLILILAASAPSAFRSLARYRSALPL
                     CTVIFSAAWCLNASVGGGQLAQMNYHLLAVNLVTLMVDTSAALWLAALLMLPYCLLFA
                     GSAGAYPPNALVLILPALVVNRLSRMLVNRLPPNIFIFIFVNGFLASAAGILLTGLVL
                     IGILDAANAFPSEILWTAALPVFILLAWAEAFLSGISTAIFVALKPHWINTFDDNRYL
                     KSERGIWL"
     gene            49469..49828
                     /locus_tag="ACFJAG_000048"
     CDS             49469..49828
                     /locus_tag="ACFJAG_000048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CrcB family protein"
                     /protein_id="HFC3979466.1"
                     /translation="MLSNILPLSIGAIFGTTARWLLNLAVPASLSPATGNLFANWTGA
                     LLIGIFAETVSHPQWKLLLITGFFGSLTTLSGFSLETVTLLQSNRPASALANIFLHTA
                     GSLLLTWLGLKIGTAVK"
     gene            49906..50012
                     /locus_tag="ACFJAG_000049"
                     /pseudo
     CDS             49906..50012
                     /locus_tag="ACFJAG_000049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(50433..50969)
                     /locus_tag="ACFJAG_000050"
     CDS             complement(50433..50969)
                     /locus_tag="ACFJAG_000050"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HFC3979467.1"
                     /translation="MDLREVKLGGETIYEGGFVSISRDKVRLPNGNEGQRIVIRHPGA
                     ACVLAVTDDEKVVLVRQWRYAANQATLELPAGKLDVAGEDMAACALRELAEETPYVAD
                     SVRLLYSFYTAVGFCNEKMYLFEAEGVRLGSTLSNDEDEITETVLMSKDEVRQALAND
                     EIKDGKTLIGLQYWLMKD"
     gene            complement(51003..51359)
                     /gene="folB"
                     /locus_tag="ACFJAG_000051"
     CDS             complement(51003..51359)
                     /gene="folB"
                     /locus_tag="ACFJAG_000051"
                     /EC_number="4.1.2.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004150 - dihydroneopterin aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006760 - folic acid-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HFC3979468.1"
                     /translation="MDKIFLHGMKADTLIGVYGWERERLQTLIVDLDIGVPEKAGSDD
                     DIANTVHYAEVCETLRRHLKEQDFLLLEALAEYIADLVLGYFGAVWVHVKIVKPGILE
                     GVREVGVEIERGKRED"
     gene            51415..52017
                     /gene="plsY"
                     /locus_tag="ACFJAG_000052"
     CDS             51415..52017
                     /gene="plsY"
                     /locus_tag="ACFJAG_000052"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008374 - O-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006654 - phosphatidic acid biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HFC3979469.1"
                     /translation="MFNIPAVAVSYLIGSLSFAVIVSKYYGMDDPRTYGSGNPGATNV
                     LRSGKKKAAALTLLGDAAKGLVAVLLARVLQEPLGLSDSAIAAVALAALVGHMWPVFF
                     GFKGGKGVATALGVLLALSPATALVCALIWLVMAFGFKVSSLAALVATTAAPLAALFF
                     MPHTSWIFATLAIAILVLLRHKSNILNLIKGKESKIGEKR"
     gene            52109..52954
                     /locus_tag="ACFJAG_000053"
     CDS             52109..52954
                     /locus_tag="ACFJAG_000053"
                     /EC_number="2.1.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008988 - rRNA
                     (adenine-N6-)-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0070475 - rRNA base methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2030)-N(6))-methyltransferase
                     RlmJ"
                     /protein_id="HFC3979470.1"
                     /translation="MLSYRHAFHAGNHADMLKHFTLFLVLQYFNRKDKPYWYIDTHGG
                     AGLYNLEGSEAQKVGEYRQGIALLRQAQNLPAELSDFAAHIQKILPSPELYCGSPWLA
                     QSLIRIGDKLRLFELHPADFVHLQNNMGEAGLGKRGQVLREDGYKGLISLLPPPPRRA
                     VILIDPPYEEKQDYRRVTETLKAALKRFESGCYLIWYPCLSREESRKLPEELKKLLPD
                     NYLYAELHVHAPKTDGFGMHGSGMFVINPPYLLAEQLAANLPALTRLLAQDEGARYLL
                     DSKIR"
     gene            complement(53062..53394)
                     /locus_tag="ACFJAG_000054"
     CDS             complement(53062..53394)
                     /locus_tag="ACFJAG_000054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NGK_0946 family protein"
                     /protein_id="HFC3979471.1"
                     /translation="MKNLKNISVVAVCAVLLAACASENSVANYAIGDDSAVIKAGRNR
                     AEARISRAELAQHRRQRKNVSEELALEREKRANKHDAIRQGMGTAAGGLMLLNGVVGT
                     VGVMKSVF"
     gene            complement(53444..53692)
                     /locus_tag="ACFJAG_000055"
     CDS             complement(53444..53692)
                     /locus_tag="ACFJAG_000055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979472.1"
                     /translation="MKMKKLILLSVAAMLVTACTYADRRFVTQESAAEIQAKSRAIQI
                     SERAERAEYRKERREEMMDAARAIKKANENSPNIYFIR"
BASE COUNT        12256 a        15546 c        13713 g        12196 t
ORIGIN      
        1 caggcacgcc ccttcccctt actttgccgc atcgggctgt ttttttctcg gcggtggttt
       61 tcgatttccc tttccccgcc gcccctgccg gtttggcaga tgcggataat ttgaccttcc
      121 gccgcctgcc gcttcctccg gcaattagga caaagtcgat ttttccatca tccaaatcgg
      181 cacgcgcgac ccggacggca accctgtccc ccatattgaa acggatgccg ctgcgttcgc
      241 cttcgattgc catgatttcg gggcggaagt tgaaataatc ttcgcccaaa tcgctgatat
      301 gtaccagacc gtcgatatgg atatcgtcca aagtgacaaa tattccaaaa tttgccaccc
      361 cggagatttt gccttcaaat atttcaccga ccttatcgcg catataataa gttttcagcc
      421 agttttccac atcgcggcca gcatcgtcgg cacggcgttc gcaaaacgaa gtatgcacgc
      481 ccaaagcctg ccagcttttg tttggcgtgt aggttttccg gttcaatacg gctttgatgg
      541 cacggtggac ggtcaggtcg ggatagcggc ggatgggcga ggtaaagtgg gcgtatgctt
      601 cataagccaa accgaaatgc ccttcgcaat gcggttcgta aaccgcctgc tgcatggagc
      661 gcaacatcat gacttgcagc aattcggcat ccggcctgcc tttgaattgt tcggcaagcg
      721 cggcatagtc tttcggcgac gggttgtcgc cgccgccaag ttgaagcccc aacagaccga
      781 gctgctcgcg cagggtggcg agtttttcgg gcgtggggcc caaatggttg cggaacaaag
      841 ccgtatgttt gtttttcaac agaaaatccg ccgcgcaaac attcgccgcc agcatacatt
      901 cttcaatcag cttgtgggca tcgttgcgga cgacggggac aattttttcg attttgccgt
      961 tgtcgtcgaa aatcatctgg gtttcgacgc tttcaaactc caccgccccg cgcgccagac
     1021 gttttttctg caaaatttta aacagcttgt aaagcgtgtc gatttgggct ttgtgcggat
     1081 tcccgatgcc gtctgaaagc catttccaaa cttggttgta ggtcaggcgg gcatgagagc
     1141 gcatcacggc gggatagaag cggtattctt tgatattgcc cgcataggta acgaccatat
     1201 cgcacaccat acacaaacgc tcgacatcgg gattgagcga gcagatgccg ttggacaggt
     1261 tttccggcag catcggaatc atacggcgcg ggaaatacac gctggtactg cgttcttgag
     1321 catctgcatc aatcgcatcg tcagggcgga cataatggct gacatccgca atcgccacga
     1381 ccagacggta attgcgtccg actttttcgg caaacaccgc gtcgtcgaaa tcgcgcgccg
     1441 tttcgccgtc tatcgttacc aaaggaaggt cgcacaaatc gacgcggcct ttcaaatcgc
     1501 ttttgcgtac atggtcggga atttttttcg cggatttggc acacgcttca ctgaatcggt
     1561 gcggcaaatg atgcttgcgc acggcaattt cgatttccat cccgctgtcg gcataatcgc
     1621 ccaaaacttc aatgattttt gccactgcag gccggttttg ctcgggataa acctcaattt
     1681 tgccgacgat aacctgaccg aattcgggtt tgaaacgcgc cacgccgtcc ggttccaaca
     1741 cgatgctttg gttcagacgc ttgtcttccg gctccaaaat cgccacgccc ctatccatat
     1801 agaaacggcc gacaactttg ctttgcgcgc gttcgacaat atccagaacc gtcccttcgc
     1861 ggcggcccct gcggtcgata cccgcaggac ggacggtaac ggtgtcgccg tgcatgacac
     1921 cacgcatctg gcgttcgtat aaaacgaaat ccccttcgtc catcggcatg agcggcacgg
     1981 cgaagccgaa accgtcctta tgcgcctcga cgcggcattt gaccaaatcc agcttgtccg
     2041 ccgcgcaaac tgcgcctcgg cggttgatta aaacctgacc gtcccgcgcc atcgccttca
     2101 gacggcgttc aaaaaagaca tactcgtctt ccgtaatcga cagctcgcgt gcaagcgatt
     2161 cgatttttga aggcacacct ttgcgctcca acaattcgat tatccattcc cgactgggca
     2221 aaggatgttc ataacgctgt ttttcacgac ttaaaaacgg gtctttttcc cgtaaattta
     2281 aagatttaat atttttattc attttgactg ttgacattct ctttatgaac tatataatag
     2341 cgacttcttt gcggcaggac actgtaccgc aaaacagcaa ataaagcaaa gcccgggtgg
     2401 cggaattggt agacgcgcca gcttcaggtg ctggtatcct cacgggtgtg gaagttcgag
     2461 tcttctcccg ggcaccaaat aacaaattat cccgattagg ataatttccg ccattagaga
     2521 ggtggatgag tggtttaagt cgcacgcctg gaaagcgtgt atacgtgaat agcgtatcga
     2581 gggttcgaat cccttcctct ctgccaagta caaatcccaa acttttacag tttgggattt
     2641 tttgttactt acgtattgat tttattgcgt aaaatcagct acaacctatt accctacgtt
     2701 accattgatt actatccgtt accgtttttt tatggtatgt tttgcggtat gttttatcct
     2761 cttcctaagc ctgtaaggac tcaaaaggcg tatcccttca aacgatattg ttcgacatgc
     2821 tgccgggaaa ccgaacccga taccgaaacg cgacggggcg atatgccgct ggaaaaatgg
     2881 cggcagtttc ttgattggat aggaaaaacg ccgtctgaaa cagcttcaag aagccgcaaa
     2941 gcccgtccga ataaaaaata ccgtctgaaa tttttcagac ggtatcgcgt atcatttaaa
     3001 cattaatcca gctttttaaa atgacggcgg cgttccaatt cgctcaggta acgcttgcgc
     3061 aggcggatgg attgcggcgt gatttccacc agctcgtcat cgtcgataaa ctcgaccgcg
     3121 ccttccagcg tcagtttgat cggcgtggtc aggcgcaccg cttcgtcggt accgctggca
     3181 cggatattgg tgagtttttt gcctttgagc gggttgacca ccaaatcgtt gtcgcggctg
     3241 tggatgccga taatcatacc ttcgtagatt ttgtcgttgg gcgatacgaa catacggccg
     3301 cggtcttcaa gattccacaa ggcgtaagca accgcctcgc cctgctcttg ggacaccagt
     3361 acgccgttgt ggcggccggg catatcgggt ttgacgggcg cgtagtcgtc gaacacgtgg
     3421 ctcatcagcc cgacgccgcg cgtcagggtc atgaattcgc cttggaaacc gatcaagccg
     3481 cgcgctggaa tatggtattc gaggcgggtg cgtccgttgc cgtcgctttc catattggtc
     3541 agttcgccac ggcggcggcc gagttcttcc attaccgcgc cttggttgtc gtcgggtacg
     3601 tccacagtca ggttttcata aggttcgcat ttttgaccgt cgatgtctcg gtacacgacg
     3661 cgcggcttgc cgacggcgag ttcgtagcct tcgcggcgca tattttccag caaaatcgtc
     3721 aggtgcagtt cgccgcgccc ggatacgcgg aacacgtcgg catcggcggt gtcttccacg
     3781 cgcagggcaa cgttggtcag caattctttt tgcaggcggt cgcggatttg gcggctggtc
     3841 acgaatttgc cttctgtacc tgcgagcggg ctggtgttta ccataaagtc catcgtcagc
     3901 gtcggttcgt ccacgctcaa catcggcagg cctttggggt tgtctttgtc ggtgatggtt
     3961 acgccgatgc cgatgtcttc gataccggaa ataatcacga tgtcgccggc ttcggcttct
     4021 tcaagcggca cgcgttccaa gcctttgaaa cccaaaagct ggttgatgcg gccttgggcg
     4081 atttgctgct cgtggttcat cacggcaacg gtttggccgg gtttgatgcg tccgttcaag
     4141 atacgaccga taccgaggcg gccggtgtag ttgtcgtagt cgagttggga aatttgcagt
     4201 tgcagcggct cgtccgcgct gccactcggt gcaggcgtgt attttaggat ggtgtcgaac
     4261 agcgggcgca tatcgctgct ctcgtcggtt tcttccagct tggcaaagcc gctcaaacct
     4321 gaagcgtaaa caatcgggaa atccaactgc tcgtcggtcg cacccaagtt gtcgaacaac
     4381 tcgaaagtct ggtcgataac ccagctcgga cgggcggacg gtttgtcgat tttgttgatg
     4441 acgacaatcg gtttcagccc caaagccaag gcttttttgg tcacgaaacg ggtttgcggc
     4501 atcggacctt cctgtgcgtc caccaacaag acgacgcaat ccaccatccc caaaacgcgc
     4561 tccacttcgc cgccgaagtc ggcgtgtccc ggcgtgtcga cgatattgat gtggcagcct
     4621 tcgtaatcga tggcggtgtt tttggcgagg atggtgatgc cgcgttcttt ttcaaggtcg
     4681 ttgctgtcca tcacgcgctc gtcaacctgc tggttggcgc ggaatgtgcc ggattggcgc
     4741 agcagttggt cgaccaatgt ggttttgccg tggtcgacgt gtgcgatgat ggcgatgttg
     4801 cggatttgtt tcataattaa tgtttttcaa aaactgtaag agataactgc gtattatacc
     4861 acgatttacc ggacagtatt tggaaaatga agatgccgtc tgaagccctt gcctttcaga
     4921 cggcatcttc ttacatactt tcagttatcc agttgcgcag ccaccttgcc gccggggcga
     4981 tttcccctgc cgacagccca gccgcaatgc ctgccgattc ctttataaca tccgccgccg
     5041 cgccgtgcag ccacgcgccc gcgcaggcgg cttcaaaaac cggcacgccc tgtgcgagca
     5101 gactgccgat gatgccgccc aatacgtcgc cactgcccgc cgttgccaat cccgcattgc
     5161 cgctttcgtt gacatagatt tccgtatcgg acgcggcaac caatgttttg tgccccttta
     5221 aaaccacggt tgcaccgaga attgccccta tcttccttac tgccgccgtc cgatccgcct
     5281 gaacctgtgc aactgtcgtt ccaagcaggc gcgcggcttc ggcggggtgc ggcgttaaaa
     5341 tcaggttttt acacccgcgc gccagatttc gggtttcggc atcggttgat aatatgttca
     5401 gcgcgtccgc atccaaaacg acggcttcgt ctcgattccg cgccagcact gccgccaccg
     5461 tttccactgc cgccgcatct gtacccaagc cgcaacccgc cgtccaagcg tttatgcctt
     5521 gacgcttggt caaaccgtct gccgtatcca acataatctc gggaaaaccg gcaatgacgg
     5581 caaaaggcag cgtatcctga ttgaaacctg cccgcacctt accgcagccg agatacattg
     5641 ccgccgatgc cgccaatacg ggcgcgccgc tcatccctgc cgatccgccg actacggcga
     5701 gcgtgccgaa agtccctttg tgcgaatctt ccgcacgggc tttgaaaaca tggggaaaac
     5761 gcaatgccgt ctgaagcatc cggcggcggc tttcgcctga aagatggaaa acgggaaaca
     5821 tttcccctcc aatcggttaa aattaaggct cgaaaacaaa ccgattctac cgccggaaac
     5881 cgattatgaa aaacaaaacc aaagtctggg acttccccac ccgccttttc cactggctgc
     5941 ttgccgcatc cctgcccttt atgtggtata gcgcaaaagc cggcggcgat atgctgcaat
     6001 ggcacacgcg cgtcgggctg ctcgtccttt tcctgctcgt attccgcctc tgctggggca
     6061 tttggggcag cgataccgcc cgtttctccc gtttcgtccg aggttgggca ggtatacgcg
     6121 gctatctgaa aaacggcatt cccgaacata tccagcccgg acacaacccc ttgggcgcac
     6181 tgatggtcgt tgcgcttttg gccgccgtct catttcaagt cggcacgggg ctttttgccg
     6241 ccgatgaaaa caccttcagc accaacggct acctcaacca tttggtttcc gaacatacgg
     6301 gcagccttat acggaaaatc cacctcaact ttttcaagct gctcgccgtt ttttccgcag
     6361 tccacatcgc cgccgtcgcc gcataccgca tattcaaaaa gaaaaacctc gtccgcccga
     6421 tgataaccgg cttcaaatac atcgaaggca aaacctcaat ccgctttgcc ggcaaagccg
     6481 cgcttgccgc cgcattatcg gttgccgcgc ttgccgcagc cgccatcctg ctcctgtcct
     6541 gaaacccgac atcatgccgt ctgaagccct tttctgcctt tctgacggca ttttccccac
     6601 cgcacaaacg gtctgaatgc ccgaaacggc ttcaggccgt ttttccgtcc aaaaccgtta
     6661 tatagcggat taacaaaaat caggacaagg cggcgggccg caggcagtac aaatggtacg
     6721 gaaccggttc gcccggtgct tgggcgcctt agggaaccgt tccctttggg ccggggcggg
     6781 acaacgccgt accggttttt gttcatccgc tataaaacgg aaaaccgccg catccgcagc
     6841 cgccccccat atagctttca gcttctaaca aatgcctttt tattatttaa aatgacccgc
     6901 attccgacaa aaatgccgcg acgcaccgta tcggaaacaa ggtgcgggca aacagcaaag
     6961 gagtcagcca gtgaattatt ttcccatttt cgccaacctc gccggccgcc ccgtattggt
     7021 cgtaggcggc ggcgcggtcg ccgcacgcaa aatcagcctg ctgctgaagg ccggcgcaga
     7081 ggtcggggtt gccgcaaaac acctgaatgc cgaactctcc gcgttggcgg cggaaaacaa
     7141 aatcctgtgg cttgccaaag aatttcgtgc cgaacacatc cgcacggttt tcctcatcat
     7201 tgcggcaagc agcgaccaag ccctcaaccg gcgcgttttc catcttgccg aaagctgcca
     7261 aaagccggtc aacgtggtgg gcgaccgtga ccattgcagc ttcatcttcc cgtcggttat
     7321 cgaccgcgac cctgttcaga ttgccgtttc cagctccggc agcgcgcccg tcctcgcccg
     7381 cctgctgcgt gaaaggctgg aagccttgct gccgccgtct ttgggcgata tggcggaaat
     7441 ttcaggaagg tggcgcgatg ccggttttta tttccccgtc caactggtcg tccgccaaga
     7501 tgccgacaag gccgacggtt tccgaggcta tcaggggcgc atcgaacgcg gttcggtcac
     7561 cgtcgggcaa accgtccgca tcgaaccgaa cgggctgacc gccgaagtgt ccgaaatcat
     7621 cgcgccgaaa ggggaagtgg cgcaggcttt tgccggcgag gcggcaacca tccggctgga
     7681 ccgcgacatc gatgtttcgc gcggcgatct ttttgtcgat aaaaatttcc cgctcgcccc
     7741 gcaaaaacat ccggaagcca cgctttgctg gtttgacgaa cgcccgctca acaccgcgcg
     7801 caaatacctg ctcaagcacg gcacgcaaac cgtgccggca aaagtcgggg aaattgaaag
     7861 cgttttggat gtccgcacgc tggaacaaga ggccggcgcg gaatccttaa agatgaacga
     7921 catcgccaaa gtccgcatca accttcaaaa acccgttacg gcaacgcctt atgcggaaaa
     7981 caccgccgcc ggttcgttta tcctgataga cgaagcgaca tacggtactg ttgcggcagg
     8041 tatgatttta tgagtgaaca cgatatgcag aacacaaatc cgccattacc gcctatgccg
     8101 cccgaaatca cgcagctcct gtgtcggggc tgtccggcta cgcttgggca aaagcaggaa
     8161 acggggcatc cgcagggctg cccgcgcttc agacggcatt gccggcggca gaaccttttt
     8221 ccgtaaccgt cctttccgcc tcgcaaaccg gcaatgcgaa atccgttgcc gacaaagcgg
     8281 cggacagcct gaaagccgcc ggcatccaag tcaggcgcgc cgaactgaaa ggctacaagg
     8341 cgaaaaacat cgccggcgaa cgccgcctgc tgctggttac gtccacccag ggcgaaggcg
     8401 aaccgccgga agaagccgtc gtgctgcaca aactgctgaa ctgcaaaaaa gccccgaaat
     8461 tggacaaact ccaatttgcc gtactgggtt tgggcgacag ctcctatccg aatttctgcc
     8521 gggcgggcaa agatttcgac aaacgttttg aagaattggg cgcaaaacgc ctgctcgaac
     8581 gcgttgatgc ggatttggac tttgccgccg ccgcagacgg atggacaggc cgcattgtcg
     8641 cgcgcttaaa agaagaagcc gcaaaaaacc gggcaacgcc cgcgccgcag gcaacgtccc
     8701 cccgccggcc ttcagacggc atcggagggc aggtactgca aggcagaccc ctttcccgcc
     8761 gccctgctgg ccaatcagaa aatcaccgcc cgccaatccg ataaagacgt gcgccacatc
     8821 gaaatcgatt tgagcggttc ggatttgcac tacctcccgg gcgacgcgct cggcgtttgg
     8881 tttgacaacg atccggcact ggtcggggaa atcctagacc tgctcggcat caatccggca
     8941 acggaaatac aggcgggcgg aaaaaccctg ccggttgcct ccgcactgtt atcccatttc
     9001 gaactcacgc aaaacacccc cgcctttgtc aaaggctatg ccacgttcgc cgatgatgac
     9061 gaactcgacc gtattgctgc cgacaacgcc gttttgcaag gctttgtgca aagcacgccg
     9121 attgccggtg tgctgcaccg cttcccggca aaactgacgg cggaacaatt cgccggcctg
     9181 ctgcgcccgc ttgcgccgcg cctgtattcg atttcctcgt cgcaggcgga agcgggggac
     9241 gaagtgcacc tgaccgtcgg cgcagtgcgt ttcgaacacg aaaggcgcgc caggtcgggc
     9301 ggcgcatcgg gtttctttgc cgaccggctg gaagaggacg gcacggtgcg cgtgtttgtg
     9361 gaacgcaacg acggcttcag gctgcccgaa gacagccgca agccgattgt gatgatcggc
     9421 tccggtaccg gcgtcgcacc gttccgcgcc ttcgtccaac aacgtgccgc agaaaatgcg
     9481 gaaggcagaa actggctgat tttcggcaat ccgcattttg ccgccgactt cctctatcag
     9541 accgaatggc agcagtttgc caaagacggc ttcctgcaca gatatgactt cgcctggtcg
     9601 cgcgatcagg aagaaaaaat ctatgtgcag gacaaaatcc gcgaacaggc ggaaggactt
     9661 tggcaatggc tgcaggaagg cgcgcatatc tatgtgtgcg gcgatgcggc aaaaatggca
     9721 aaagaagtgg aagccgcctt gctggatgtg attatcgggg cagggcattc ggacgaagac
     9781 ggcgcagaag gatatttgga tatgctgcgc gaagaaaaac gctatcagcg tgatgtttat
     9841 tgattaaata taatcgggag gaacacaaaa tgaccgtaca ggccaagaca aaaggtttgg
     9901 cgtggcaaga aaagccgcta tccgacaacg aacgtctgaa aaccgaaagc aattttttac
     9961 gcggcacgat tttggacgat ttgaaagacc cgctcacggg cggcttcaaa ggcgacaact
    10021 tccaactcat ccgcttccac agtatgtatg agcaggatgg ccgcgacatc cgcaccgagg
    10081 caaaactcga gcccttgaaa tttatgcttt tgcgctgccg gctgccggcg ggatcatcaa
    10141 accgtcccag tggatagaac tggacaaatt cgcccgggaa aagagtcatt accgctccat
    10201 ccggctaacc aaccggcaaa ccttccaatt tcacggcgtg ccgaaaacca agttgcagac
    10261 gatgccccgc ctcttgcaca gcctgggttt ggattccatc gctacggcgg cggatatgaa
    10321 ccgcaatgtg ctttgcacct ccaacccgat cgagtccgag ctgcaccggc aggcttacga
    10381 atacgcgaaa aagatttccg aacacctgct gccgcgcacg cgcggttatc tggatatgtg
    10441 ggtggacggc aaaaaagttc aaagttccga cgacttcctt caagaaggcg agccgatttt
    10501 gggcaaaacc tatctgccgc gaaaattcaa aaccgcagtc gtcatcccgc ccttgaacga
    10561 tgtggactgc tacggtaacg atttggattt cgtcgccgtt tcagacggca acggacagct
    10621 tgccggcttc aatgttttgg cgggcggcgg gctttcgacg gaacacggca acggcaacac
    10681 caaaacctat ccgaacattt cactggaact gggtttcgtg cctccggaac acgcactgaa
    10741 ggccgccgaa gcggtggtaa ccacgcagcg caacttcggc aaccgcagcc accgcaaaaa
    10801 cgaccgcacc cgctacacca ttcaaaatat gggcttggac aacttccgca cggaagtcga
    10861 acgccgtatg ggtatgccgt tcaaacccat acggccgttc aagtttaccg ggcgcggcga
    10921 ccgcatcggc cgggtgaaag gcatagacgg caactggcat ttgacccttt tcatcgaaag
    10981 cgggcgtttg gttgacgaag gcgggaaaca gcttctgacc ggcgtgttgg aaatcgccaa
    11041 aatccacaaa ggcggcttcc gcatcaccgc caaccaaaac ctcatcgtgg caaatgtgcc
    11101 cgaaggaggc aaagcccgga tcgaacagct cgcccgctca tacgggctga tacgcgacgg
    11161 tgtcagcaag ctgcgcgaaa atgcgatgtc gtgcgtttcc ttcccgacct gcccgctggc
    11221 aatggcggaa gccgaacgcg tgttgccgga cttcatcggc gagctggata agattatggc
    11281 ggaacacggc gcgtcggacg actacatcgt tacccgcatt accggctgcc cgaacggctg
    11341 cggacgggcg atgttggcgg aaatcggact ggtcggcaaa gccgtgggac gctacaacct
    11401 ccacatcggc ggcgaccgcg aaggcgtacg catcccccgc ctctacaaag aaaacatcac
    11461 cctgccggaa atcctttccg aattggaaga cctgatcggc aaatgggcgg cgggacgcga
    11521 taccgacgaa ggtttcggcg atttcgccat acggacgggc atcgtcaaac ccgtgttgga
    11581 tgcgcccgtc gatttttggg acgcatccaa agccgtcccg attgcgcgcg cctgaacccg
    11641 tcccccgcat tcctgcgggg atgttctttt ttgccgcaca cgtttccatt ccgcaaaatt
    11701 ccgatacttg gtataaaata cccccttttc ccactctaaa aaaccgtacc cgatgccgtc
    11761 tgaaacagcc ctgcctttca gacggtatag gcacaaggaa acacactatg ccagaatacc
    11821 gctccaaaac ctccacccac ggccgcaata tggcgggcgc gcgcgcattg tggcgcgcca
    11881 ccggcgtgat ggaaaccgac ttcggcaagc ccatcatcgc cgttgccaac tccttcaccc
    11941 aattcgtgcc cggccatgtc cacctgcaca atatgggcca gctggttgcc cgcgagattg
    12001 aaaaagcagg tgcaattgcc aaagaattca acaccatcgc catcgacgac ggcatcgcca
    12061 tggggcacag cggtatgttg tactccctgc ccagccgcga tttgattgcc gactccatcg
    12121 aatatatggt caacgcccac tgcgccgacg cgctggtgtg catttccaac tgcgacaaaa
    12181 tcaccccggg aatgctgatt gccgccatgc gcctgaacat ccccaccatc ttcgtctccg
    12241 gcggcccgat ggaagcgggc aaggtcatcg gcgtggcaaa catccaaccc gaacgccgtt
    12301 tggacttgat tgacgccatg atcgaatcgg cggacgacaa tgtcagcaac cggcaagtcg
    12361 aagaagtcga acaaaacgcc tgcccgacct gcggctcgtg ttcgggtatg tttacggcaa
    12421 actcgatgaa ctgcctgacc gaagcgctcg gtctgtccct gcccggcaac ggttcgtatt
    12481 tggcgaccca cgcaggccgc aaagaattgt tcctcgaagc agggcgtatg attgtcgaaa
    12541 tcaccaaacg ctattacgag caagacgacg aaaccgtgct gccgcgcagc attgccacca
    12601 aaaaagcgtt tgaaaacgcc atgacgatgg atattgcgat gggaggcagc accaatacca
    12661 tcctgcactt gctcgccgtc gccaacgaag cgggcgtgga tttcaaaatg gcagacatcg
    12721 accgcttaag ccgcgtcgtg ccctgcatct gcaaaaccgc gcccaacaac cacgactact
    12781 atatggaaga cgtgcaccgc gccggcggca tcttcgccat tctgaaagaa cttgacaaag
    12841 cgggcaaact gcacaccgac gtgtacacga tccacgcgcc gacactgaaa gacgcgattg
    12901 aaaaatggga cgtcaccaat cccgaaaaca cccgcgccat cgaacgtttc aaagcggctc
    12961 ccggcggcgt gcgcaccact caggcgttct cgcaaaaccg tatttggaaa accctcgacc
    13021 ttgaccgcga aaaaggctgt atccgcgacg tggcacacgc ctactcgcaa gacggcggtt
    13081 tggcggtctt attcggcaac atcgccgagc gcggctgcgt ggtaaaaacc gcaggcgtgg
    13141 acgagagcat cctcaaattc accggccgcg cgcgcgtgtt tgaaagccag gaagccgccg
    13201 tcgaaggtat tttgggcaac caaatcgtcg ccggcaacat cgtcatcatc cgctacgaag
    13261 gcccgaaagg cggcccgggt atgcaggaaa tgctataccc gacctcctac ctgaaatcca
    13321 aaggcttggg caaagcctgc gccctcttaa ccgacggacg cttctccggc ggcacatcag
    13381 gtttgtccat cggacacgcc tcgcccgaag cggcggaagg cggcgcaatc ggtttggtac
    13441 acgaaggcga tacgattgaa atcgacatcc ccaaacgcag catccgcctt gtcatttccg
    13501 atgaagagct tgccgcacgc cgtgccgaaa tggaagctcg cggcagcaaa gcgtggaaac
    13561 cggaaaaccg cgaccgctac gtctccgccg cattaagggc ttacggcgcg atggcgactt
    13621 ccgccgacaa aggcgcggtg cgcgacgtat cgcaaatcga gagataagcc ccaaaacgtg
    13681 cggcaaatgc cgtctgaaca gtaaaggtat gattattaac aaatttacct gggcgatggc
    13741 ggtattttcc gcaattttgg ccctcgttat cggcagcggc tttaccgcgc tcgagtatgt
    13801 aaaagagccg cctgccgccc cttatgctgt ttccgcgccg aaaaccgccg gggtcaagcc
    13861 tcggcgcatc ctgccggaac ggaatccccc gtgctgccga ttgacggttc aaaccccgcg
    13921 cccgtttcaa acaccggcga tgcggacgga caggatacgc ctgacggaaa ggcagcagat
    13981 accgtttcca tcatcggggt cggcggcatt atgctcggca gcaattatcc ggtcgattac
    14041 ccgcccgata ccaatatcct gaaacacgtc gaatccgtct tggaagatgc ggacattacc
    14101 gtcggcaacc ttgaaggtac gctgtttgac gaaggcggta cgccgaaaaa atgtgcaaac
    14161 caccaaaata tgctatgcat tccgaacgcc ctccgcatac gggcaatacc ttgccgacgc
    14221 gggattcgac tacctcagcc tcgcaaacaa ccacagcaac ggcttcggcg cgcaaggcat
    14281 cacggcaacg gcaggcaacc ttgacgaatt gaacatcaaa tattcgggca tcgaaaacag
    14341 gtttgaaacc gccatcctga agaaaaacgg cgtgagatac ggcttcgtct ccttcgcccc
    14401 caaccttgcc gccgtcaaac tgaacgatta cgccaaattc aaaaaactga ttcggaaaac
    14461 caaacaaaaa accgacatcg tcattgtgat gttccacggc ggcgcggaag ggaaacaggc
    14521 tgaacacctg ccgttcgata ccgaaatctt ctatggggaa aacaggggca acgtcgtcga
    14581 gtttgcgcgg ctcgccgtcg attccggcgc ggatgtcgta ttcgggcagg gggcgcacgt
    14641 tactcgcgcc gtcgaacttt accacgaccg cttcatctct tacagcggcg gcaactttgc
    14701 cacctacggc atcagcggca ttgcgccgat tttcaaaatt atcaccgaca aacaggggcg
    14761 gttcgtttcc ggcaacatta tccccatcac tcaagtcggc gataaaatcc ccaaaatcga
    14821 ccctgaaaaa actgttattg agcggattat ttatctgaac catagcgact tccccaacgg
    14881 gaacggactg gatgtctcgc ccggcggcga catcacgcgc cggtaaaaag atattggaaa
    14941 ttccgtccga acaaatgccg tctgaaagcc ttttttcagg tttcagacgg catttttcaa
    15001 tcgtcaataa tccgctttaa tcccggaggc tttttccact tcggcgacct cgccttccgg
    15061 ctcaaactgc aagggataca ggttaagctt ttccatcagg attctatcgc cgtcctcatc
    15121 aggattgcct gtggtcaaca gcttgtcgcc gtaaaaaatc gagttcgcac ccgccatgaa
    15181 gcacatcgcc tgcatcgctt caggcatatt gctgcgccct gccgagaggc ggacataact
    15241 ttgcggcatc gtaatccgcg ctacggaaac cgtacggaca aattcggtcc aatccaaatc
    15301 ttcggcatcg gcaagcggcg tgccttccac tttgaccaac cggttaatcg gcacgctttc
    15361 gggctgcggg tcgaggttgg cgaggctggc aatcagcccg gcgcgttcgg cgcgggtttc
    15421 gttcatcccg acgatgccgc cgcagcagac tttcaaaccg gcgttgcgga ctttgcccaa
    15481 ggtatccata cggtcttcgt gccggcgtgt gtggatgatg tcgttgtagc ggtcggggtc
    15541 ggtgtcgagg ttgtggttgt aataatccaa gcccgcctct ttcaagtctt ccgccatacc
    15601 ttcttcgagc ataccgaacg tgccgcaggt ttccatacct aagcccttga cggctttgat
    15661 gattgcggaa accgtctcca cgtctttggg tttggggccg cgccatgccg cgcccataca
    15721 aaaccggctt gcgccgcgcg atttggcgat tttggctttt tcgacgattt catccacatc
    15781 catcatctgc tctttgccca aattggtgtt gtggtgcgct gattgcggac agtaggcgca
    15841 atcttcggga caaccgccgg ttttgatgga caacagcgtg gaaagctgga tttcgcgcgg
    15901 gttgaaattt tggcggtgga cttctgccgc ctgatagaca agttctaaaa acggcagtcc
    15961 gaaaagtgcc tcgacatcgc attttttcca atagcgcgcg gtgggatgag gcttgcactc
    16021 ggtcttacgg cgcaaggcga cgggggatac ggtcataatg tgttctttcg tatttacagc
    16081 ggcgcaatga cgctgacagg caaaccgccg gcgcaatgac ggcggttgcg ggtaatcaaa
    16141 tggctgaaaa cagcggcggc aagtgtaacg cgtttgaaaa tacggggcaa acggtttttc
    16201 cgcctttgtg ccgcgcagcc gggcaatgcc gtctaaaggg ctttcagacg gcattgcccg
    16261 ggctatctca aagcgtccag cagtttggtg tgtattccgc cgaaaccgcc gttgctcatc
    16321 accaaaatat ggtcgccggt tcgggcgttt ttcacaattt cggcaacgaa ggtatcgaaa
    16381 tctttaccga cgcgcagcct gcagcccaaa ggcgcgaggg cttcggcaac gtcccagtcc
    16441 gcgccgccgg cgtagcagaa cacttggtcg gcttctttga ggcttgcggg cagggcggac
    16501 ttcatcgtgc cgagtttcat ggtgttggaa cgcggctcga ggacggcgag gatgcgcgcg
    16561 ccgccgacac gttggcgcaa accttgaatc gtggtttcga tggcggtcgg gtggtgggcg
    16621 aaatcgtcgt aaacggtgat gccgtttgcc gtgcctttga tttccatgcg gcgtttgacg
    16681 tttttaaacg cacccaaggc ttcgcaggcc gtctgaacat cgactccggc atggcgtgcg
    16741 gcagcgatga cggcgagcgc gttcatgcgg ttgtgtccgc ccatcaaatc ccatgcgacg
    16801 tgtccggctt ttttgccgtc aagcaatacg tcgaacgagc cgtcggcatt gacttcacca
    16861 atctgccagc cgtgtccggt gccgaatttt tccaccggcg tccagcagcc tttgtccaaa
    16921 gtatcttgca ggctttgctg ctgtccgttg cagacgatga ggccttcgga tggtacggtg
    16981 cgcacgaggt ggtggaactg ggtctgtatc gcgcccaagt cggcgaagat gtcggcgtgg
    17041 tcgaattcca gattgttcaa cacggcggta cgcgggcgat aatgcacgaa tttggagcgt
    17101 ttgtcgaaaa aggcggtgtc gtattcgtcg gcttcgatga cgaaaaacgg cgatttgctg
    17161 ttcgggtctt gacgcggcgt ttgcggtagg cgggcggaaa cgccgaaatt ttccggtaca
    17221 ccgccgatga ggaagcccgg cgcgagtccg gcatattcca agacccaggc gagcatggac
    17281 gcggtggtcg ttttgccgtg cgtccctgcc acgccgagta cccaatgatg gtgcagcacg
    17341 ttttcagcca gccattgcgg gccggaaata taaggcagcc cacggttcaa aatcgcctcg
    17401 accacatcca tcccgcgcct ggcgacattg ccgatgacgt aaatatcggc ttgaaattct
    17461 tccaactgcg cggcatcgaa gccttcgtgt acgcctatgc ccaaggcttc gagctgggtg
    17521 ctcatcggcg gatacatctt cgcgtcgcaa ccgctgactt tgaacccggc ttctttggca
    17581 atggcggcaa tcccgcccat aaacgtgccg ccgataccga taatgtggat gtgtttcatc
    17641 agagttccct aatcgttcaa attctattgt tcaacaccgt aatggttgat tcggtttcaa
    17701 tcaatgcggt ctgatgccgg catccgaacc gtctttctgt gcattccctt tcggattttg
    17761 gacggcttcg tccctcaccg tgtccgaata atcgccaact cctgcgtctt ccgccctgtc
    17821 tttcacggca ggcctgaccg aactgtacac ccgatcccgc cccaaacccg cgttggtaca
    17881 atcttttccc ggagtttggc tgtaactggt tttaccatta tggcggcact cgtaaacatt
    17941 tgccgaaaat acggtctgaa ccgctgcaac aagcaatata cttccaatca ttttagatac
    18001 gcgcatatta aactccttta ttgttcctct tcaaaaaaag gaatgtattt caatagaact
    18061 tcatctaatt ctttcattcc ttgctcataa ttgaacgggt attcccaacc atcccctact
    18121 ttgatttcag aaatgtcttt aaacttccgc ttaagggcgg acactttgtc catatcgtca
    18181 tcaatttcct gtttgccgaa cggtattttc cgcttttcca aaacctcgtc ataataacaa
    18241 ggtaaattca gcaatagccc ccaagcgcta tttgcgatta cgactaatct atgtttttcc
    18301 ctagttaagt aatctgcact gctatcatag attgcccttg tcggatcata aaaaaattcg
    18361 caatttttca tagcgtcccc acactttaac cgattcgcaa ttttatatcc gcgattttgc
    18421 aagctgccca taaaaaccga ttgcctgcca agccgacact acttgttaaa gatgcccgat
    18481 aatgccgcaa ctcttccgta tttaccgaca aacgccctat ttgcttagag ctgttttgtt
    18541 ttccacaaaa ctttaatccg ttgatttaac aaatttttta ccaaattctt tatttgttcg
    18601 gattccatta gcacgatttt gagcaatatc tgtcaaaacc atttccacca tatccaaaac
    18661 aaaaccgccg ccgccacggc attggacgat aagatgagtt tccactgccc gtccttccgc
    18721 aatgccgcct tcttgggctt caaagcaccc gcataaaaaa acggtgacag cagcatagaa
    18781 gcgatacata agaaaatcaa tacgccgtaa tagatttttt cagacggcat ttctcttcct
    18841 caatacgccg cccgttggcg catctgttca aacaggcaga ttgtcgccgc catcgcgaca
    18901 tttaaagact cggttgcatc gtgcatcggt atcctgacac acttgtccgc cctgtctaaa
    18961 actgctttac cgacacccgc accttcgttg ccgaacaccc aagctgtcgg ttcgcacaaa
    19021 tcttcgccgt acaaaaccgc ctgcttttcc tcgcgcaacg cggtggcaaa cacacggtct
    19081 tcatagtgcg ccaaccatat ttccaaatcc gcctgcgaat aaatgtccaa caagaaatgc
    19141 gcgcccatac ccgcgcgtaa taccttgggc gaccacgcgt ccgcacaacc cctgcccaaa
    19201 acgaccgtac ctacccctgc cgccgccgca ctccgtaaga cggtgccgac attgcccgga
    19261 tcttgcacgc cgtccaaaac cgcacagtcg cctttgtccg gcaaggttcc gcccaatggg
    19321 atatcaatca gtgtaagtat ctcgtctgca caactcaagc tgctgatttt tttcaatatg
    19381 ccgtctgaaa cggaaaaaat cccgtcttcc ggcaaaaccg ctgtcaattt aaggacttct
    19441 tcagacggca ttttagcttc gggaatatat accccgaccg gctttctgcc ggattgcagg
    19501 aaaacctgaa gcaggtgcac gccctccaaa acggtttggg catactgccg tctgaacttt
    19561 ccttgcgaca acaggcggtg caggtgtctg atatgttcat tattggtcga actgatgtgt
    19621 ttcacttcac aagcctttta gaaatatgca accggacaat acccgactga acgccgccga
    19681 aatctgtttg cgatattatc aaaataaaat gggaaagtca ggatgtacgg gcaaaatgcc
    19741 gtctgaaacc gagatttgaa aatccgcaca acagtttgcc aacgccaatg gacggtttcc
    19801 gctgtcggca acgagcggcc aaattgggcg caggaaaggc agaacccgtt tcccctgaag
    19861 gatttttttc acatttttat ggatgccgcc gacagccaac gtatccgatg ccgctaccgt
    19921 cctcaaaatc ccgtcctgtt ccaacatggc ctcaggaagt ccgaacggat gccgcttcaa
    19981 cacaaatcta tgttctgtca gtattttttt gagatttccg cttatcgtcc catctttcag
    20041 aaaagccggt tttgccaact gttccgacgc aaacacaaac agcctgcctg cataatgatg
    20101 caattcaaag ccttgcaagt tccaacgtcc ggtttttgcc tccgtcaaaa cgcgggcaat
    20161 gtcggcaagt gcgttctgat tcggcacggg gatgccgttt tcctttagaa aattccgcaa
    20221 aatatgggtt ttccggcgcg gggaaaacgt cagccaccgc gccgtatcga aataaccggc
    20281 cccgcaaacc caacggcagt cttgaacgac gacctcttcc aacaaagcca aatcttcctg
    20341 caaagcgcgg acattgttca gcacatgccg cccgaaatgg ggaatctgcg ccgaaagttc
    20401 gggcaaaata cggtgccgga agcggtttcg caaataagcc gtatcggtat tgctttcatc
    20461 ctcgatattc ggcaaaccgt gttttcgggc ataatcccat atgtcttggc gcgaaaaagg
    20521 cagcaaaggc cgccagataa tgccgttttc ccccaaaggg cggacggcgg gcatagccgc
    20581 caaagcgcgc aaacctccgc cgcgcgcgac tgccagcata aaggtttcga tttgatcgtc
    20641 cctgtggtgc gccaacgcca aaacgtcaaa gcctttttcg gcaaactcgg cataacgctt
    20701 ttgccttgcc gccgcctcga tgcccaaacc gtttttttcc acgcagacct taaccgtttc
    20761 cagccccacc cctagcatat cgcaataatt ccggcagaaa tccgcccaat cgtcggctcg
    20821 gggactcaag ccgtgatgga tgtgcaatgc ctccggcaca aatcctgccc gcttcccggc
    20881 acaaaccagc agatgcagca aaacgacgga atccaagccg ccgcttaatg ccactgctgt
    20941 tttttttcca ttcagacctt gaggaaaaca atccttcaag cattgctcaa acgcatctaa
    21001 agtcagcacg gcttcatccc gataaagaaa aagcaagcag tttcagacaa actgcttgct
    21061 gcttgttcta cccgaattat tgttccgaaa atttgccgta agccataatg cggtcgaaac
    21121 ggcgcgaaag caaatcggca agcgggatgc tttgcgcttc gtgcagttgt ttttccaaaa
    21181 cggcttttac gtttttcatg gtttgcccga aatccctatg cgcaccaccc aaaggctctt
    21241 taatgacggt atcgaccaag tccagctttt gcaggcggtc ggcagtaata cccaaagcct
    21301 gtgccgcatc agccgccttt tcggcggttt tccacaaaat cgaagcacag ccttcggggg
    21361 aaataacgga ataggtcgaa tattgcagca tattgacgta atcgcctacg gcgaccgcca
    21421 acgcaccgcc cgaaccgcct tcgccgatga cggtacacaa aacgggaacg cgcagtcggg
    21481 tcagttcgta caggtttttg ccgatggctt ccgactgccc gcgttcttcc gcgccgatgc
    21541 cgggatacgc gcccggcgta tcgataaagg tcatgacggg caagccgaat ttttccgccg
    21601 ttttcatcag gcgcagggct ttgcggtagc cttcaggacg gagcataccg aagttgcggc
    21661 ggattttttc tttggtgtcg cgccctttct gatgcccgac gaccacaacg ctttgtccgt
    21721 tgaaacgcgc caatccgccg acaatcgcat gatcgtcggc aaagtggcgg tcgccgtgca
    21781 gctcttcaaa atcggtaaac agcgcgtcaa tgtaatccaa agtataggga cgctgcggat
    21841 gccgggaaac ctgtgaaatt tgagcgggtg tgagtttgct gaaaatcgat ttggtcaaat
    21901 cgttgctttt tttctgcaaa cggtgtattt cgtccgaaat atcgacggca gactcgtctt
    21961 ggacgaaacg cagctcatcg attttgttgg tcagttcggc tatgggttgt tcaaaatcca
    22021 aaaaaacagg tttcataaaa tgaagctctc atcaacagat tctgccgcta tcatacgcta
    22081 tttgtgcata ttccgcagtt aatttattgt ccaaaacggc ttttccacac cctctttttg
    22141 tgttcggaca gcatggaaaa cagcggatta gtgcatatat actagttata aggcgatgta
    22201 tcttatgcta aactcgaaac aaattcaatt atttcaaaca aaatcgtatg aaagacaagc
    22261 acgattcttc cgccatgcgg ctggacaaat ggctttgggc ggcacgtttt ttcaagaccc
    22321 gttcccttgc gcaaaagcat atcgaactgg gtagggttca agtaaacggc tcgaaagtca
    22381 aaaacagtaa aaccatagac atcggcgata ttatcgacct gacgctcaat tcccttcccc
    22441 ataaaatcaa ggttaaaggt ttgaaccacc aacgccgccc ggcacccgag gcgcggcttc
    22501 tgtatgaaga agacgcgaaa acggcagcat tgagggaaga gtgcaaacag ctcgaccaat
    22561 tcagccgcat cacttccgcc catcccgacg gcagaccgac caagcgcgac cgccgccaac
    22621 tggacaggct gaaaaaagga gactggtaaa accattcccg ctgcaaacag aagcacgaac
    22681 cgcgtaccgc cgcatttcag acggcattcc tgaaacttat tccgcctcgt ctatccatgc
    22741 ctgctgcacg gcttcaagga tgcgttcgcc gcaacgggcg ggatcgtcgt caaattcggg
    22801 caatgccata atcaggtcgc gcagttgggt aaagcgcacg gttttgggat cgatggcttc
    22861 gccgtgcagg tcgtagagtt cttcggcgat gcgccgggta tcggtccatt tcatataaat
    22921 ttccttttat cgtccggcat tgaagccgtg tagaatatgt ttcggcaaaa ctgccgcccc
    22981 ttgaggatgg ctgaatgttt caactcgccg gacggcacat caagcaccac cttatgtgtc
    23041 gtcctgatcc gggaggagtt acccctccca aacaaatctg attctaccgc cctgaagagc
    23101 ggggtttcaa ccgataagga agattgatga acaatatgtt tgccgcaaaa ttgtccgaac
    23161 tggtttatac cgcttccgac catcccgact ccctgtcgga gatggaggag tttgaccgcc
    23221 tgattctgct gatacgcaaa ctgtatcaaa tattggacgg gcaacatacc ctctacagag
    23281 taacggtttg ccttaactac cggagcaggc gcggtctgat tgctttggat aaagcggctg
    23341 tcggttgcga tgcggcaatg ttgcgcgccc ggcgttggcg catctgcatg cagattgcgg
    23401 aacgcctttc cgagtcggtc gggcggcttc acggttgcgg cagaaagcgt gtccgccgcc
    23461 tgccccgagc ttgaaggacg ctatctcgac cttgtccgcc gcgccgccgt ctctttcggt
    23521 ttcgcgcaag gacaggcaaa tccggcaggc gggcaggaag aaacgcaagc cgcctcagat
    23581 gccgtatcgg gtcgttccgt caaaaaaccg ataaaaatca atatagaatc gaaagttccg
    23641 tcttcacaaa cgtctgtttt tcggtaattg cgccttatcc gcgcaacaat gccgtctgaa
    23701 gcgtgtcggc ttcagacgac ctgttttcag tgttcttcgc gcgcgtggtt gatggtgtat
    23761 ttggggattt ccacaatcaa atcctcgccg gcaacaaccg cctgacaact caggcgcgaa
    23821 tcggcttcca aaccccaagc ctgatcgagc aggtcttctt ccaattcggc cggctcttcc
    23881 aaactgtcga aacctttgcg gataatcacg tggcaggtgg tgcaggcgca ggatttttca
    23941 caggcgtgat cgacttcgat gtcgtggtcg agcagcacgt cgaggacggt tttgccttcg
    24001 ggcgcgttat cgatgactgc accctcgggg cataatgttg cgtgtggaag tacggtgatt
    24061 ttgggcattt ttattgtctt tctgtaaaaa gtatttgtgt ccgtttttag gaaaactgtc
    24121 tgcctaatgt cgcggttcga gcaggtcggc aacattttgc cagcccgtca ggcgggcaaa
    24181 atcgagggcg gtatagcctt ccgatgtctt tgaggcagga tttgcgccgt attcaagcat
    24241 ggcttgaacc ataagtgcat ttcctgccat ggcttcatga tgaagcggcg tatagccgtc
    24301 ttcgtcctgc tcatgcagaa aatccggatt ttgggacaac tgttgccgaa aatcgtcaat
    24361 acagttccgg cacatcggat gctcttccaa attttcggga tgttcttttt cttcatacac
    24421 cggcaatacc tgcccgggat cgccgaaatc gattccccag gcggtatcgt gttcggtacg
    24481 ctcctcttcc gtcatctgtc cgcgcattgc ctgtacggta aagccgccgt aggggatgcc
    24541 gttgcacacg aacatccagt cgctgatgtc gccaaccgga acgcaaacgc tttcgccttg
    24601 ttcgacattg gtcagtccgc cgggttcatt gttcagcaca ccgtaaatgt aaagaccgtc
    24661 aaaataaata tcgtcgatcc acatatgttc gcaaatttcg ccgtcttgga aaaaagggac
    24721 tttgaccatg gcaaaatcca aggcggaaat aatgcggcgg cgttcccaaa aaagctcgcg
    24781 ccaaaagtat ttgaatgttt tacgggcgcg ttcgccggca cggtttaccg gttcgtctgc
    24841 ctgttctaca taataaatga cggaatcgcc catcatactg ctcctcaacg tgtacggtat
    24901 ctgtttgcac cttaccgcgg ttttctgcct ccggcatccg attcggattt gaaaagttcc
    24961 aaatattcgg aataggcttt ttctaagttt acccgcgaaa accaggtgta aatatggatg
    25021 ccgtctgcaa tttcgtcggt cagcctcctg ccgcttttgc gggaatatgc ttctttaaaa
    25081 aggcggattt tcgatttttt cggcttgtag gatgccgcgt ccgccaaaag ccggggcagc
    25141 gcgtaagggt attcccggtg tccgcgccgt accaaatcaa gcagttgttt gcggccggac
    25201 ccggcattcc cttcctgccg gcgttcgtgg acgctttttt caaattccga ttccgccgtt
    25261 tcgtttttcg ggaacacgat ttcgccgcga agcgataaaa acaaacgttt cacaaggttt
    25321 tcgtccacgg cgaacaattc ggtatcgcct atcctgcttt tgctgaaaat ttcatggagc
    25381 aggttttttt tctttgtaat tgtcggtttt gacggcgagg aggcgttcca acccggcaac
    25441 gttcgcatag ccgttgtttt ccaaatggcg cattctgcct tcaaaattgc ttacgtccga
    25501 aatgccgatt ttatatagtg aattaacaaa aatcaggaca aggcggcgag ccgcagacag
    25561 tacaaatagt acggcaaggc gagccaacgc cgtaccggtt taaatttaat tcactataca
    25621 cgcccttgat gacggttttc atcgaataga caatgcctga cttttccata tcgatgtttt
    25681 tcaagtgttt tcgatccttc agacggcatc aggttatatc tatgccgtct gaaaccgttt
    25741 aagtatcaaa tattatcgac actctgacct gtcagcgcac gttggatgtt gcggttcatg
    25801 cgcttggcgg cgaaattgtc ggtgctgcgg ctgagtttgg cgacagctgc acggatgtct
    25861 tcagctttac cgtctttcag acggccttgc aaatcggcga tgtctcgctg gatttgtgca
    25921 aactcttcgg catccagcaa atcgctgtcc aactcgaggg cggcgttgac ggcatcggtc
    25981 aggctttcgg cttcgaccac ggcttcggcg cgggcgcggg ccgccatatc ttcggcggcg
    26041 ttgcccatgc tgtctttgag catttgggtg atggtgtcat cgtccaaacc gtaggagggt
    26101 ttgacttcga tttgcgcctg tacgccggtg ctttgttctt gggcggaaac ggacagcaaa
    26161 ccgtcggcat cgatttggaa ggtaacgcgg atacgcgccg cacccgccgc cataggcgga
    26221 atgccgcgca gggtaaattt ggcaaggctg cggcagtcgg aaacgagctc gcgctcgcct
    26281 tgcacgacgt gtatcgtcat cgcggtctga ccgtctttga aggtggtaaa gtcctgcgcg
    26341 cgcgcggtgg ggatggtgga attgcgcggg atgatttttt ccgccaagcc gccgtaggtt
    26401 tccaaaccga gcgacaaggg cgtaacgtcc agcagcagcc attcgccgtc ggctttgttg
    26461 cctgcgagga cgtttgcctg tatggctgcg ccgagcgcga cgacttcgtc gggattgagg
    26521 ttgttcagcg gggtttgtcc gaaaaaggtg gcgactgcct gttggacgtg cggcatacgg
    26581 gtcgaaccgc cgaccataac cacgcctttg acttcgtttt taccgacacc ggcatctttc
    26641 aacgcctgtt tgaccggctc gagcgttttc atcaccaaat gctgcgtcag gttgtggaac
    26701 tcggcgcgac tgatgcttgt gtcgattgcc ataccgtctg aaagcgtcgc ctgaatgcgc
    26761 gcttcggttt gcgtggtcaa ttgttctttg gcggcgcgga cgagcgagag caggagttgg
    26821 ctgtcttgtt cgttgagttg ggagagtctg ttttgttcga gcaggtagca gaacaaacga
    26881 tggtcgaagt catcgccgcc caacgcgctg ttgccgccgg tggctttgac ttcaaacagt
    26941 cctttggtca gttgcaacac ggatacgtcg aatgtgccgc cgcccaaatc gtacacgaca
    27001 aacgtgcctt ccgaggcgtt gtccagcccg taggcgattg cggcggcggt aggttcgttg
    27061 agcaggcgca atacgttcaa accggccaga cgcgcggcat ctttggtggc ctggcgttgc
    27121 gcgtcgtcga aataggcggg gacggtaatc accacgccga ccaaatcgcc gcccaaggtt
    27181 tcttcggcac gcaatttgag ggttttgagg atttccgccg acacttcgac aggcgttttc
    27241 accccctgcc gcgtatgcag ttcgataaag cgttgattgt cgccgaaacg gtaaggcagg
    27301 taatgcgtat tttgatgcag atcggcaaga gtccgcccga taaggcgttt ggcggagctg
    27361 acggtgttca gcgggtcggt tttttgggcg gacagggcgg ttttgccgac ttcaatgccg
    27421 ccgttttcca gatagcggac gacggaaggc agggtaacgc gcccgtcggc atcgggcagg
    27481 caggcggcac tgccgctgcg gacggtggcg accaagctgt tggtcgtacc caaatcgatg
    27541 cctgccgcca aacggtgccg gtgcggggcg gcggacatac ccggttctga aatctgcaaa
    27601 agagccataa attctgcctg tcggtgcggt gtgtaaagga aggaaggcgg cattttaaca
    27661 gaatttgcgc cgatagttga gcaaaccgct aaggattggg ccgtgccgcc gaaattgccc
    27721 tctaccgcca aataccgata aaatccgcct ttcccgccca tcattaggaa tataaatcgt
    27781 gaaaggactc gactattgcc gccaaaaagc agaggaaagc cgctccagtt ttttgtcggg
    27841 cttccgtttc ctgactcagg aaaaacagga tgcggtaacg gttctgtatg ccttttgccg
    27901 cgaattggac gatgtggttg acgaatgttc caaccccgat gttgcacagg caacattgaa
    27961 ctggtggcgc ggcgatttgg acaatgcgtt cggcggcgcg atgccggaac accccgtcaa
    28021 tcaggccttg cggcaggtta aggaaacctt caagctgccg aaatatgaac tggaagcctt
    28081 aatcgacggg atgcagatgg atttggttca ggcgcgttac ggcagttttg aggaattgaa
    28141 actgtattgc cgccgcgtcg cgggcgtggt cggctgcctg attgcgcgga ttttggggtt
    28201 ttcagacggc aaaacgctgg aatacgcgga taaaatgggt cttgcgctgc aactgaccaa
    28261 catcatccgc gatgtcggcg aagatgcgcg caggggacgg atttacctgc cgatggagga
    28321 aatgcagcgg tttgacgtac ccgcaagcgt gattttgcaa tgcagcccga cgggcaattt
    28381 tgccgaattg atggcgttcc aaatcaaacg cgcccgtgaa acctaccgcg aagccgtatc
    28441 gctgctgcct gatgccgata aaaaagccca aaaagtcgga ctggttatgg cggcggttta
    28501 ttacgcgctg ttgaacgaaa tcgaccgaga cggcgcgcaa aacgtcctca aatacaaaat
    28561 cgccctccct tcgccgcgca aaaaacgcat tgccctgaaa acctggttat tcggattcaa
    28621 accgcgcccc ggcacgccgg aacgggcata aggcgcatac tgcccttcag gaaaacccaa
    28681 cccccgccgc cccgaaaaac ggggtttcaa ccattggagg aataaatgat gaacacgccg
    28741 catccgcgcc cgaaaatcgc cgtcatcggc gcaggctggg ccggcttgtc cgccgccgtc
    28801 accttggcgc ggcacgccga cgttaccctg tttgaagccg gccggcaggc gggcggaagg
    28861 gcgcgcacac tggccggaaa taccgacggt ttcggttttt tggacaacgg gcagcacatt
    28921 ttgctcggcg cataccgggg cgtgttgcgc ctgatgaaaa ccatcggttc agacccccgt
    28981 gccgcctttt tgcgcgtacc gctgcactgg catatgcacg gcggtttgca gttccgcgcc
    29041 ctccccctgc ccgcgccgct gcatattttg ggcggcgtgc tgcttgcccg gcgcgtaccg
    29101 tccgcattca aagccaaact gcttgccgat atgtccgatt tgcagaagtc cgcacgcctc
    29161 ggacagcccg acacgacagt tgcacaatgg ctgaaacagc ggaacgtgcc gcgtgccgcc
    29221 gtaatgcagt tttggcagcc cttggtctgg ggcgcgctca acacgccttt ggaaaccgca
    29281 agcctgcgcg tgttgtgcaa cgttttgtcc gacggcgtgc tgacgaaaaa atccggcagc
    29341 gactatctcc tacccaaaca ggatttgggc gcaatcgtcg ccgaacccgc cttggcggag
    29401 cttcaacggc tcggcgcgga catccgcctc gaaacgcgcg tatgccgtct gaacaccctc
    29461 ccggacggaa aagtcctcgt caacggcgaa gccttcgatg ccgccatact tgccaccgcg
    29521 ccctaccacg ccgccgcgct cctgcccgaa ggcacgcccg aacacgttca gacggcatat
    29581 caaaaccttc gctaccacgc catcaccacc gtctatctgc gctacgccga acccgtccgc
    29641 ctgcccgccc cgctgaccgg cattgccgac ggcacggcac aatggctgct ttgccggggc
    29701 aggctcggac tgcccgaaaa cgaaatctcc gccgtcatta gcgtttccga ccgcgtcggc
    29761 gcgtttgcaa accgggcgtg ggcggacaaa gcccacgccg acctcagacg catccttccg
    29821 catttgggcg aacccgaagc cgtgcgcgtc atcaccgaaa aacgcgccac aaccgcaacc
    29881 gatgccccgc cgccggattt gtcgtggctg caccggcacc gtatcttccc cgccggcgac
    29941 tacctccacc cgcactaccc cgccacgctc gaagccgccg tacaatcagg tttcgcgtcg
    30001 gcggaagcct gcctgcaaag cctgaacgat gccgtctgaa aacgccggcc ggcatcggga
    30061 cgctttacaa ggtgcggcaa aacgctaaaa tacattaacc gtcaaaccca aaggacaacc
    30121 atgccgacac tgaccgacaa aaccatctta gttaccggcg catcgcaagg cttgggcgaa
    30181 caggtcgcca aagcctacgc cgccgaaggg gcgaccgtaa ttctggtggc acgccatcag
    30241 aaaaaactgg aaaaagccta tgacgcgatt gtcgaagccg gacaccccga acccttcgcc
    30301 atccgtttcg acctgatgag tgcggaagaa aaagaattcg aacggtttgc cgccaccatt
    30361 gccgaagcca cgcaaggcaa actggacggc atcgtccact gcgccggcta tttttacgcc
    30421 ctctcgccgc tggatttcca aaccgtcgcc gaatgggtca accaataccg catcaacacc
    30481 gtcgccccga tggggctgac ccgcgccctg ttcccgctgc tgaagcagtc gcccgacgcg
    30541 tccgtcatct tcgtcggcga aagccacggc gaaacaccca aagcctactg gggcggcttc
    30601 ggcgcgtcca aagccgcgtt gaactacctg tgcaaagtcg ccgccgacga atgggaacgc
    30661 ttcggcaacc tgcgcgccaa cgtcctcgtc cccggcccca tcaattcccc gcaacggatc
    30721 aaatcccatc cgggcgaagc cggaagcgaa cgcaaaagct acggggacgt actgcccgca
    30781 tttgtctggt gggcaagtgc cgaaagcaaa gggcggagcg gcgaaatcgt ttacctctaa
    30841 atccggaaaa ggcaggcatc ccgcccgcgc cgcgcttccg ttttgaaaaa tatccgtacc
    30901 ttccgcgcgc atccgtcccg cacagacaaa caccttgact taaatttaca taaggacaat
    30961 aatgataacc cgttatttcc ctaactggac cttagggtaa attttatgaa aaccgtttcc
    31021 gccgccatcg cttttgccgc cgctgccgtt tcactgaccg gctgtgcgac cgagtcctca
    31081 cgcagcctcg aggttgcaaa agtcgcctcc tgcaatacgc aatatcacgg tgttcgcacc
    31141 ccgatttccg tcggaacatt cgacaaccgc tccagcttcc aaaaaggcat tttctccgac
    31201 agtgaagacc gtctgggcag ccaggcaaaa accatcctgg taacacacct gcaacaaacc
    31261 aaccgcttca acgtactgaa ccgcaccaac cttagcgcat tgaaacagga atccggcatt
    31321 tccggcaaag cgcagaacct gaaaggcgca gattatgtcg ttaccggcga tgtaaccgaa
    31381 ttcggacgca gagatgtcgg cgatcatcag ctcttcggca ttttgggtcg cggcaaatcg
    31441 caaaccgcct atgcaaaagt ggctctgaat atcgtcaacg tcaatacttc cgaaatcgtc
    31501 tattccacac agggcgcggg cgaatacgca ctttccaacc gcgaaatcat cggtttcggc
    31561 ggcacttccg gctacgatgc gactttgaac ggcaaagttt tagacttggc aatccgcgaa
    31621 gccgtcgaca acttggttca ggctgtcgac aacggcgcat ggcaatccaa ccgttaagga
    31681 gaaatgatga atccgaaaac cttgggccgt ttgtcgctgt gtgcggcggt cttggctctg
    31741 accgcctgcc ggcggcgggc ataaaaacct gtattattac ggcggttatc ccgataccgt
    31801 ctatgaaggt ttgaaaaacg acgacacttc gttgggcaag cagaccgaaa agatggaaaa
    31861 atactttgcg gaagccgcca acaaaaaaaa tgaatgccgc cccgggtgcg cacgcccatt
    31921 tgggactgct gctttcccgt tcgggagaca aagagggcgc gttccgccaa tttgaagaag
    31981 agaaaaggct gtttcccgaa tcgggcgtat ttatggactt cctgatgaaa accggtaaag
    32041 gaggcaagcg atgaaacctt tgattttagg gcttgccgcc gtgttggctc tgtctgcctg
    32101 ccaagttcga aaagctcccg acctcgacta cacgtcattc aaagaaagca aaccggcttc
    32161 aattttggtg gttccgccgc tgaacgagtc gcctgatgtc aacggcactt gggggatgct
    32221 ggcttcgacc gccgcgccga tttccgaagc cggctattac gtctttcccg ccgcagtcgt
    32281 ggaggaaacc ttcaaagaaa acggcttgac caatgccgcc gatattcacg ccgtccggcc
    32341 ggaaaaactg catcaaattt tcggcaatga tgcggttttg tacattacgg ttaccgaata
    32401 cggcacttca tatcaaattt tagacagcgt gacgaccgta tccgccaaag cacggctggt
    32461 cgattcccgc aacgggaaag agttgtggtc gggttcggcc agcatccgcg aaggcagcaa
    32521 caacagcaac agcggcctgt tgggggcttt ggtcggcgca gtggtcaatc agattgccaa
    32581 cagcctgacc gaccgcggtt atcaggtttc caaaaccgcc gcatacaacc tgctgtcgcc
    32641 ctattcccgc aacggtatct tgaaaggtcc gagattcgtc gaagagcagc ccaaataagc
    32701 atatgccgtc tgaacctctc cgagcttcag acggcatatg cgaatcttga tacttgcaag
    32761 ccgcaccgcc caaaatcagg cgaccggttt caatatccga acaaggttcg ggttctgtat
    32821 tttgcagaac ccgaaccttt tattcaaatt taaacttaat tccggcgtgg ttgtatggta
    32881 aattatagtg gattaaattt aaaccggtac ggcgttgcct cgccttgccg tactatctgt
    32941 actgtctgcg gcttcgtcgc cttgtcctga tttttgttaa tccactataa caagcaatat
    33001 gccctgaccg gcaaaacttc cccaaacttc atcaaaaaat caactgtacc cgtctttttc
    33061 agacggcatt gataccgtaa gagatttccc atgcaaaacc ggcaaaccga gctttattcc
    33121 acgccgtctt ggctgttgca gaccttattg atgattaccg ccgcctcggc ggtgattctg
    33181 tttttcgcgc gcaacacgcg cttggggcgg gagtttgcct atatcctgcg cctttgcctg
    33241 acaccgaaaa gcacggtcaa agtattgctg ctgattacgg caatggttac gctgctgtta
    33301 accgaagtgc ggttgaatgt gttgagtacc ttcatgtcca aaggacttta cgattcgatg
    33361 caggatttga atgcttcggc attttggatg tttgcagcga tgaacgccgg cgtggtactg
    33421 atacgggcgt ttaacaacgt cgttaacgac tttctcgatt aaggcttggc gattaaatgg
    33481 tcggaacggc tcaatgaagt tttgacttcg cgctggcttg ccgacaaaaa ctactaccgc
    33541 ctgcaaatgc gccgccacgc gccggacaac atcgaccagc gtatccaaca ggatgcgcag
    33601 gaattcatcg cttcgaccat cgaatttgtg cgcggcatgg tcaattcggt cgttacttct
    33661 ctggaatttg ccgttgtttt gtggggcttg gcaggcatcc tgaccgtgtt cggcttcgac
    33721 attccgcacg gcattgtttg gtttgtcttt attttcatga ttttggcgat ctttatcgcc
    33781 atgtggatag gcaacccttt gattcgttac aattatgaaa acaaaaaact caacggcgac
    33841 taccgttatt ccctcatcct cgtacgcgac cacgccgaaa gcgtggcgtt ttacagcggc
    33901 gaacaacacg aacacggccg gctttccgac cgctttaaag ccattatccg caaccgttgg
    33961 cgcatcgcgc ggcaaagcgt ctgcttaagc ggctttaacg atatgttcac caacggcatc
    34021 aaactcttcc tgattatttt gcaagctccg cgcctgtttg ccggacaaat caaaatcggc
    34081 gacatccagc agaccgtcca agccttcgcg cgactgcaaa acgcgctgtc tttcttccga
    34141 atgttctaca acaaattcac cgcctgccac gcccgactgg agcgtctgta cgtctttttg
    34201 ctgagtaccg aagaacaaca cggcgcgcag caacccgaga ttagcgaagt ttcagacggc
    34261 attgcactgg aaaacgtcgc cctgttccgc cacaacggcg aagttttatt ggacggcatc
    34321 aacatcaaac tcaaaagcgg cgattccctg ctgatacgcg gcccgagcgg tttaggcaaa
    34381 acctcgctgc tgcgcgcgct ggcggggctt tggccgttcg gcagcagcgg caaagtcagc
    34441 cgtccgccgc atcaaggcat cctcttcctg ccgcaacgcc cgtacacggc acaaggcagc
    34501 ctgcgcgacg cggtttgtta ccccgatatc gacaaacagc atcccgagtt agccgaagcc
    34561 atgaacacct gccgcttggg ttatctgatt gacaaattgg ataaaacaga cggctggcag
    34621 cacaaactct cccccggcga actgcaacgc gtcgccttcg tccgcgccct gctctccaag
    34681 cccaaaatcg tcctgctcga cgaagccgcc gccgccttgg acgaaccggc cgaagcctag
    34741 ctctaccgcg ccttaaagca aaaactgccc gacagcatca tcagtatcgg acaccgaagt
    34801 acgctcaacg cgttccgcaa tatgcacctc gatgtcggca acgctgcctg cggctgaacg
    34861 atgccgtctg aagccgtttt cagacggcat cgttcaaatt ggaaagacac gcgaaaacaa
    34921 cgtacaataa acccgattcc aacccatccg gtatgccttt gtgaaccagc ttattttcga
    34981 ctttgccgca cacgactatc cgagtttcga caaattcctc ggcacggaaa atgccgaact
    35041 ggtctatgtg ttacagcata aacacgaccc gtttatctac gtctggggcg aagaaggcgc
    35101 gggcaaaagc catctgttgc aggcgtgggt cgcacaggcg ctcgaagccg gcaaaaacgc
    35161 cgcctatatc gatgccgcct ccatgccgct gaccgatgcc gcgtttgagg cagaatacct
    35221 cgccgtcgat caagtcgaaa aactgggcaa cgaagaacaa gccctgcttt tttccatctt
    35281 caaccgcttc cgcaacagcg gcaaaggctt tttgctgctc ggttcggaat acacgcccca
    35341 gcagctcgtc atccgcgaag atttgcggac gcgtatggca tactgcctcg tttacgaagt
    35401 caagccacta accgaccaag aaaaaatcga cgcgctcgcc aatatggcgg cggcacgcca
    35461 agtaaccgtc gattccgaaa ttttcgaata cctgctcaaa cactggcggc gcgatatgga
    35521 cagcctgatg atgatgctcg acacgctgga caactacgcc gtaaccatgg gcaaacgcat
    35581 caccctgccg ctgcttcgcc agcttttgaa acaacaggaa acccaatgaa aaacctcgcc
    35641 atcttcgacc tcgacaacac cctcatcaac accgattccg accacgcctg gccgcaatac
    35701 ctcatcaaaa aagggttggt tgacgctgcc gaaaccgaag cgcaaaacga aaaattctac
    35761 cgcgactacc aaaacggctg cctcgacatc gacgcattcc tcaaactcca cctcgccccg
    35821 ctcgcccgtt acagcaaaga agagctggcg gagtttcacc gcgaatttat ggcggaatac
    35881 atcatccccc acatctcgcc tatgcagcgt atgctggtgc agagccacca aatggcaggc
    35941 gacgaaaccc tcgtgatttc ctcaaccaac gagttcatca tcacccccgt ctgccgcctt
    36001 ttcggcatcg ccaacatgat cggcacacaa ctcgaaaccg gtcccgacgg ccgctacacc
    36061 ggcaattaca tcggcacgcc cagcctcaaa gaaggcaaaa tcacccgtct gaaccaatgg
    36121 ctcgccgaac gcggcgaaac gctcgaaagc tacggcaaaa cctattttta cagcgactcc
    36181 aaaaacgacc tgccgctgct gcgcctcgtc agcgaacccg tcgccgtcaa ccccgatgcc
    36241 gaactggaaa aagaagccaa agaaaaaggc tggccggttt tgaatttcaa atgacgcaat
    36301 gccgtctgaa gcccgattcg gcgttcagac ggcattgagg ctgaaatccc aaaaacccaa
    36361 agccacagga attcatccgg aaaaacaaaa aacacaggaa ttcatcggga aaaacaacaa
    36421 tctttccacc gtcattccca cgaaagtggg aatcttgatc cgtccgcacg gaaacttata
    36481 tttcgtcatt ccaccaatcc cacaccacct ttaccggttc aaatccgcac aaaaatccac
    36541 atcccgtcat tcccacgaaa gtgggaatct aggacgtaaa atctaaagaa accttttttt
    36601 cccgataagt ttccgtgccg acaggtctgg attcccgcct gcgcgggaat gacgaaattt
    36661 caaagttatg gcgttatcgg aaaaacagaa aatcaaagcc ggagaattta tccaaaacaa
    36721 ccggatttca aaaaaaccaa attcccggcg ggaatgacgg attttaggtt tctgttgtgg
    36781 tttctgtttt ctcgggaata acaacttaga aattgcccga aaccccaaaa acagaaaccg
    36841 gacaaacagg ttttccgcca aagccggcat tttccgactt tgcttcaggc atcttcccct
    36901 ctgcctaaaa tcatcgaccc gataccggca tcggtaaaga tttccagcaa aagcgcgttg
    36961 ggcaccctgc cgtcgatgat gtgcgtggct ttcacaccgt tggcggcggc ttcgaccgca
    37021 gaagcgattt tcggcagcat accgccatac agcgtgccgt cggcaatcag cccatcaatc
    37081 cgtttcggcg tgagtttggt cagcagattg cccgttttgt ccatcacacc ggcgatattc
    37141 gtcatcatca agagtttttc ggcgttcaat tcttccgcca atttccctgc caccaaatcg
    37201 gcgttgatgt tgaacgcttc gcctttttca cctacgccga cgggggcgac gacgggaatg
    37261 cagccgcgtt ctatcagccc tttaaccaaa ccggtatcga tgctttccac cgtaccgacc
    37321 tgtccgatgt ccacgctatt ctgttcgggc gtatcgacca aaagtttctt cgccttaatg
    37381 aaatggtcgt cgcgcccgct cacgccgacc gcgtgccctc catatgtgtt aatcatcgac
    37441 acgatttcct tgttgacgtg cccgcccaat accatttcga caatatccat cgtctctttg
    37501 tcggtaacgc gcattccttg gacaaattcg ccctttttgc cgactttttc aagcatcgca
    37561 ttgatctgcg gcccgccgcc gtgaacgatg acgggatgaa tgccgaccag cttcagcagc
    37621 acgacatcgc gggcaaaccc ttctttcaag gcaggttcgg tcatcgcgtt gccgccatac
    37681 ttgatgacgg cgaccgaacc ggaaaaccgg cggatgtaag gcagtgcttc ggcaaggata
    37741 cgcgccttgt cggcggcgga aataatgttt tcaaactcca taacggctcc atattgttga
    37801 caatttcggc ttatgttaac gccaaacgcc gtctgaaaca atcttcagac ggcgtttggc
    37861 acaccttcgg gcaggttgaa gccttgcgat acgggcggta aaatcgcggt ttatccggtt
    37921 cgagaaaccg gcgacagcaa ggactttccc atgattaaaa tcagcacccg cttcgatgcc
    37981 ggctcggtcg tcgtcaaaga cctgaccgac ccttccaaca tccgcctcgc cctgcgtccc
    38041 gacaacgcct ccgatttcgc acaatggttc tacttccggc tgcaaggcgc ggcctatcaa
    38101 aactgcatca tgcattttga aaacgcggca gaagccgcct acccgaaagg ctgggaaggc
    38161 tatcaggcgt gtgcctcata cgaccgccgc aactggttcc gcgtaccgac ttcctacgaa
    38221 aacggcgtac tgaccgtcaa tcatacgccg ctgtccaaca gcgtgtatta cgcctatttc
    38281 gaaccctatt ccgaagagca gcacctcaac ctcctcggcg acgcacaagg cagcggcctg
    38341 tgccgcatcg acgacttggg cagcaccgtg caaggtcgcg acatcaatct gctgaccata
    38401 ggcaaccaag tcgaaagcga catgaaaatc tggattaccg cccgccagca cccgggagaa
    38461 accatggcgg aatggtttgt cgaagggctg ctcggcaggc tgctcgattc gcaagacccg
    38521 acagcacgca ccctgctcga ccgcgccacg ttctacatcg tccccaatat gaatcccgac
    38581 ggttcggcac tgggcaacct tcgtaccaac gccgccggtg cgaacctcaa ccgcgaatgg
    38641 gaaaacccga ctttggaaaa aagccccgaa gtgttcttcg tgcgcggaaa aatgctggaa
    38701 accggcgtgg atttgttttt ggacatccac ggcgatgaag gtctgccctt tgtctttgtt
    38761 gcaggaacgg aaggtgtgcc gaactacaat ccgcgcattt ccgcgttgga agcgcagttc
    38821 aaaaccgccc ttttgaacgc cagccccgat ttccaagacg aatacggtta cgaaaaagac
    38881 gcgccgggca aagcgaatat gaccttggcg accaactggg tcggcaaccg tttcaactgc
    38941 cttgcctaca cgctggaaat gccgttcaaa gacaacgcca acctgcccga cgacgacttc
    39001 ggctggaacg gccagcgttc tttgcggctt ggggaagcgg tgctttccgc cattttgaac
    39061 gtcgccggcg atttgcgctg acactcccca ctgaaaatgc cgtctgcaag cccttttgcg
    39121 tctttcagac ggcatttgaa aacgaaagcc cgttatgatt atccatcacc aattcgatcc
    39181 cgtcctcatc agtatcggcc cgcttgccgt ccgctggtat gccttaagct acatcctcgg
    39241 atttattctt tttacctttc tcggcagaag gcgcatcgcg caaggcttgt ccgtttttac
    39301 caaagaatcg ctcgacgact tcctgacatg gggcattttg ggcgtgattt tgggcggacg
    39361 cttgggctat gtcctgtttt acaaattctc cgactacctc gcccatccgc ttgatatttt
    39421 caaggtatgg gaaggcggaa tgtcgttcca cggcggcttt ttgggtgtag ttattgccat
    39481 atggttgttc agccgcaagc acggcatcgg cttcctcaaa ctgatggaca cggtcgcgcc
    39541 gctcgttccg ctgggtctcg cttcgggacg tatcggcaac tttatcaacg gcgaactttg
    39601 gggacgcatt accgacatta acgcattttg ggcaatgggc ttcccgcaag cgcattacga
    39661 agatgccgaa gccgccgcgc acaatccgct ttgggcagaa tggctgcaac aatacggtat
    39721 gctgccgcgt catccctcgc agctttatca gtttgccctt gaaggcatct gcctgttcgc
    39781 cgtcgtttgg ctgttttcca aaaaaccgcg cccgaccggg cagactgccg cgctttttct
    39841 cggcggctac ggcgtgttcc gctttattgc cgaatttgcg cgccaacccg acgactatct
    39901 cgggctgctg accttggggc tgtcgatggg gcaatggttg agcgtcccga tgattgtttt
    39961 gggtatcgtc ggctttgtcc ggttcggcat gaaaaaacag cactgaccgc ctgtgaaaaa
    40021 taccgtctga aacatggaaa tccggtttca gacggcattt ttacgtttgg ttcagatgaa
    40081 aacaaacgct tcaattctta ccgcaacacg ccttgtattt cctgccgctg ccgcacggac
    40141 agggatcgtt cctgccggtt ttttcccctt ccctgcggac ggtttgcggt ttgttgatga
    40201 ccgcctgcca gtagcggtag atgtctgcca gcgcgtaagg cagttcggac gcaagttccg
    40261 ccagctcgcc ttcggtgaat tgcaggcgga tagcgccgtt ttcctcttcg tcgtaaatgc
    40321 cgcccaatgc catcacgggg taaaacagct cttcaaacgc ttcatcatcg gcggcttcaa
    40381 accaatcggt cggcacaatg tccaaaccgt aaagataggc gttgcaccaa gtgtaaaaat
    40441 cgctgccgcc ctcgccgtcg tcgtagagcc acaaatcggg cagcttttta tccgacatcg
    40501 cggcggttgt ttccatcgcc attgccaaaa ccagccgttc gatttcggaa cgttcggcgg
    40561 cggtaaattg cgattcgtcg cccaacactt cgggcagcca gtcgagcggt gccaatttgt
    40621 ccggcccgct caacagcgcc gtcataaaac cttgaacctc gtcgcaacgc atcgtgttgc
    40681 cttgttcgct tttggcatcc aacaattcgc ccaaccgccg tttggatgct tcggtaaatt
    40741 ttcgggaatc catcattttc cttttcaaat gggttttgcg ccctattata gtggattaaa
    40801 tttaaatcag gacaaggcgg cgagccgcag acagtacaaa tagtacggca aggcgaggca
    40861 acgccgtacc ggtttaaatt taatccacta tatcgccgca atgccgtctg aagccttttt
    40921 atgcttcaga cggcatcgtc tgttttcacg ctcaaatcgt accgctgccc tgcgccttcg
    40981 gtttggcggc actaaattcc agcttgctca aagcggaaag gtaagctttg gcggtcgccg
    41041 ccaaaatgtc ggtatccgcg ccctgaccgt tggcgacgcg gttgccgcgc gccaaacgga
    41101 cgctggtttc gccttggctt tccgtacctt gcgtgacggc gttgacggaa taaatctgca
    41161 aagtcgcgcc gctttgcgcc acgctctcaa tcgctttgaa aattgcatca acagggccgg
    41221 agccggttgc ggaagcgcgt ttttcttcgc ctttgatgcc gaacacgatg tcggcgcgcg
    41281 gctcttcgcc ggtttcggtg ctgatttttt gagaaatgaa tttatagctt tcggcattca
    41341 tattgcccat ttcgtccgac accagcgcgt gcaggtcttc atcgaagatt tcgcgttttt
    41401 tgtcggcgag ttctttgaag cgtgcaaatg ccgcgttcag tgcctcttcg ctttccaact
    41461 cgatgcccaa atccgccagc ttggttttga aggcgttgcg gccggacaat ttgcccaagc
    41521 tcaatcggtt tgccgaccaa ccgaccgatt cggcagacat aatctcgtaa gtttcgcggt
    41581 gtttcagcac cccgtcctga tggatgcccg attcgtgcga aaaggcattc gcgccgacaa
    41641 tggctttatt gggctgcacg ggatagcccg taatggtgga caccagtttg gacgaaggca
    41701 cgatttgcgt ggtatcgatg ccggtttcca agccgaacaa gtcgtggcgc accttcaacg
    41761 ccatcacgat ttcttcaacc gaagcattcc ccgcgcgttc gcccaaaccg ttaacggtac
    41821 attccacctg acgcgcgccg ccttttaatg cggcaagcga attggcaacc gccaagccca
    41881 aatcgttgtg gcagtgtgcc gaccagacga ctttgccgcc gttgggcgtt ttggcaatca
    41941 gttcgcggaa aaattcttcg gttttgtacg ggatggaata gccgacggta tcgggaatat
    42001 tgatggtggt cgcgcccgct tcaatcaccg cgccgcagat ttcggcaagg aaatcgattt
    42061 gcgaacgcaa cgcgtcttcg caggaaaatt ccacatcgtc ggtgtattca cgagcgattt
    42121 ttactgcttt gaccgccgcc tcaatcacct gcttcggctt catcttcagc ttgtactcca
    42181 tatggatggg gctggtggcg atgaaggtgt ggatgcgttt tttcggcgcg ggcgcaacgg
    42241 ccttacccgc ctgacggatg tcccgctcga tggcgcggga caatgaacag accgttgatt
    42301 tggtaatggt tttcgcaatc gcattgaccg cctcgaaatc gcccgggctg gcggcggcaa
    42361 aacccgcttc gatgatgtcc gcgcccaatt tttccaactg gcgggcgacg cggatttttt
    42421 cctctttggt catagcggcg ccgggcgatt gttcgccgtc gcgcagggtg gtgtcgaaaa
    42481 taataacgcg gttggcctgt gtcatttctg ttctctccag agattcgttt ttttgtaaaa
    42541 aagcattcaa atccagcggt cttccttgcg attcggcaag cgcggtcaat ttttgcagtt
    42601 gcgccaaagg cagcgagccg cgtgtgcgcc atttgtagat ggcggcggtc gtcgcggcat
    42661 tttcaggatc gtgccgtttc aacgcttcgg caagcgcgtt cacgccgccg aaataggcga
    42721 ccagacggtc tatatctaat tgcatggtag tccttgtcta aaataaatca gcccgcagca
    42781 gaaatatgga caggattata cgcattttgg acaaaacggc aatattaatt tgaaaaaatc
    42841 tcaataagtt gctataaatt ttattaattt tatacatttt gtctatttta ttgcagatgc
    42901 ggcgtgattg ttgacaattg cgacagaaca gggcaaattc ggcggtacaa ggcggcaacg
    42961 agacaggaca aaccaacaag gacggaaaca atgaaataca aaagaatcgt atttaaagtc
    43021 ggcacatctt cgattacccg ttcggacggc agcctctcgc gcggcaaaat ccaaaccatc
    43081 acccgccagc ttgccgcatt gcatcatgcg ggacacgagc tggtcttggt gtcttccggc
    43141 gcggttgctg cagggttcgg cgcgctgggt ttcaaaaaac gtccggtcaa aatcgccgac
    43201 aaacaggctt ccgccgccgt cgggcagggg ctgctgatgg aagaatatac ggcaaacctg
    43261 tcttcagacg gcatcgtgtc cgcacaaatc ctgctcagcc gtgccgactt tgccgacaaa
    43321 cgccgctacc aaaatgccgg cggcgcactt tccgtgctgc tgcaacgccg cgcgattccc
    43381 atcatcaatg aaaacgacac ggtttcggtt gaggagttga aaatcggcga caacgacaca
    43441 ttgagtgcgc aagtggcggc gatgatacag gcagacctct tggtgctgct gaccgacata
    43501 gacggtcttt acaccggcaa cccgaacagc aatcccgatg ccgtacggct ggacaaaatc
    43561 gaacacatca accatgaaat catcgaaatg gcgggcggct cgggttcggc aaacggcacg
    43621 ggcggtatgc tgaccaaaat caaagcggca accatcgccg ccgaatccgg cgtaccggtg
    43681 tatatctgtt cctcactcaa acccgattca ttggccgaag ccgccgaaca tcaggcggac
    43741 ggctcgtttt tcgtcccccg tgccaaaggt ttgcggacac agaagcaatg gctggcgttc
    43801 tattccgaaa gccggggcgg cgtttatgtg gacgaaggtg cggaacacgc tttgtccgaa
    43861 caagggaaaa gcctgctgat gtcgggcatt gccggaatcg aagggcattt ttcccgtatg
    43921 gacaccgtaa ccgtgtacag caaggcaacc aaacagcccc tgggcaaagg gcgcgtcctt
    43981 ttcggctccg ccgccgccga agacctgctc aaatcgcgta aggcgaaagg cgtgttcatc
    44041 catcgggacg attggatttc catcacgccc gaaatacgcc tgcttctgac cgaattttag
    44101 aaaaggaaac ccatgtcaaa cacacaaaaa cagcttgccc ttgccaaagc ggcaaaaaaa
    44161 tccgtcaaca cggcggatgc ggaagaaaaa aaccgcgcgc tgcttgctat ggcggacagt
    44221 ctggaagcgg cggcggaaga tattttggcg gcaaaccgtt tggatttgaa agcggcggca
    44281 ggcaaaattc ccgacagcat gaccgaccgc cttttgttgg acggcaaacg catttgcgcg
    44341 atggcggacg gcatcagggc ggttgccgcg ctgcccgacc ccgtgggcga aatactggaa
    44401 acctcgactc tgcccaacgg cttggaaatc gtcaaaaagc gcgtggcgat gggcgttatc
    44461 ggcattattt acgaaagccg cccgaacgtt acttccgatg cggcggcttt ggcactgaaa
    44521 agcggcagcg cggtcgtact ccgcagcggc aaagatgcat ttcaatccgc acgcgccatc
    44581 gttgccgccc tgaaaacggg gttggcacaa acccgcatcg accccgaagc cgtacagctc
    44641 atcgaagaca cagggcgtga gggcagttac gaaatgatga gggcgaaaga ttatctagac
    44701 ctgctgattc cgcgcggcgg ggcagggctg atacgggcgg tggttgaaaa tgccgtcgtg
    44761 ccggtcattg aaacggggac gggcatcgtc cacatttata tcgacaagga cgcggattgg
    44821 gacaaggcac tccgtatcgt gtacaacgcc aaaaccggcc gcccgtccgt gtgcaactcg
    44881 atggaagtgc tgctggtgca tgaaggcatt gctgccgact tcctgcccaa gctcgaacgg
    44941 ctgttggttc gcggccgtat agaagccgga ctgccgcccg tccgcttccg tttggatccg
    45001 caggcggcgc ggtatatcgg cggcgaagcg gcgggtgcag acgatttcga taccgagttt
    45061 ttagactaca tcctcgccgt gaaaaccgtc gcttcggttg aagaggcggt cgggcacatc
    45121 gaagcccgcg gcacgcacca ttcagacggc atcgttaccg aaaaccgcca cgctgcggac
    45181 tatttcacga cccatatcga ttctgccgcc gtgtatatca acgcgtccac gcgcttcacc
    45241 gacggcggcg aattcggctt gggttgcgaa atgggcatct ccacgcaaaa actccacgcc
    45301 cggggcccga taggtttgaa agagctgacg agttacaaat acatcgtaca aggcacggga
    45361 caggttaggg aataatccga attcaaacgt ctgatatagt ggattaaatt taaaccggta
    45421 cggcgttgcc tcgccttgcc gtactatctg tactgtctgc ggcttcgccg ccttatcctg
    45481 atttttgtta atccactata aaaatgccgt ctgaaacagt cttcagacgg catttttatt
    45541 tgcaaaaaaa tcaagcattg tccaagggga cgagaatcgt acggttgccg ttgtgttccg
    45601 gtgcggacac aatgccttcc gcttccattt ggtcaatcag acgcgcggcg cggttgtagc
    45661 cgatacgcaa ggcgcgctgt acgcccgaaa tgctggcttt gcgcgttttc aggacaacgg
    45721 atacggcctc gtcgtacatc ggatcggttt cgccgtcgcc gctgcgcccg ataccgggca
    45781 gctcttcgct gccgccgccg ctcaaaatat cgtcaacata gtccggctcg ccaaactgct
    45841 tcagatattc gaccacgcgg tgcacctctt catccgaggc aaacgcgccg tgaacgcgct
    45901 gcggataggc agtacccggc ggcaggaaca gcatatcgcc ctgaccgagc aggttttccg
    45961 cgcccatttg gtcgagaatc gtgcggctgt cgattttgct ggacacttgg aacgcgatac
    46021 gcgtcgggat gttcgcctta atcagacccg tgatgacatc gacgctgggg cgttgtgtgg
    46081 caaggataag gtggatgcct gccgcgcggg ctttttgggc gaggcgcgca atcagttctt
    46141 cgattttctt gcctgccgtc atcatcaaat cggcaaactc atcgaccacg accacgataa
    46201 acggcagttt ttccaaaggt tcgggatcgt cgggcgtgag gctgaacgga ttgccgattt
    46261 tttctcccct tgctgcggct tcggcggttt tttggttgaa gcccgcaaga ttgcgcacgc
    46321 ccataaagct catcaggcgg tagcgttttt ccatttcgtt aacacaccag ttcagcgcgt
    46381 ttgccgccag cttcatatca gtaacgacag gggcgagcag gtgcgtgatg ccttcgtaaa
    46441 tgctcaattc cagcattttc ggatcgatca taatcatacg cacgtcttcc ggcgcggctt
    46501 tgaaaagcat agacagaatc atcgcgttga cacccaccga tttgcccgaa ccggtcgtgc
    46561 cggcaaccag caaatgcggt gctttgccca agtcggttac gacgggctgt ccggtaatgt
    46621 cctgaccgag cgcgagcgtc agcttggatt tggattcggc aaactcgggc gaattgaaaa
    46681 tttcgctcag gcgtatcatt tggcgtttcg ggttcggaag ttccaaaccc atgcaggttt
    46741 tgccggggat ggtttcgaca acgcggatgg aagccacgcc gagcgaacgc gccaagtctt
    46801 tttccaaatt cagaacggaa ttgccgcgca cgccgacatc gggttcgatt tcataacgcg
    46861 taatcacggg gccggaataa gaatcgacaa ccttgacctt gactttgaac tccgccaatt
    46921 tttcttcgat ggtgatgctg ttttccaaca gttcttcttc ggtttgcgtc gcctcgggat
    46981 tgaacagcgg aggcagaagc aggtcggttg tcggcaggtg ttcggatacc gcaccggtct
    47041 cttccgattg gaacgcccct tcatccgctt ccgtatccga tacccggcag gacgggcgtt
    47101 cagacggcac atcttcaaac ggacaaaccg cctgactgtc atgcccgaac gcttcggttt
    47161 ccgacagata ttgcccgctt gaccgctctg ccgcaccctc actgccgtca tctgcaatag
    47221 cggcggtttc ctcctgccaa cctccattca aaacatcagc ggcaagatgg tcggtttcgg
    47281 caatgcggct gcgttgcgcc tgctcgaatc ctgccggcgg ctcataggta cggttgtaga
    47341 tttccgatac gggaggcggc ggcagaatat cgatttcggg tacggctacc tccggcactt
    47401 cgggtggttc gaccacccaa gcatcgggcg cggcaggctc ttcaatatgg atatcggcag
    47461 cttcatcata aaccggaccg ccgtatccca cagacgaaac ggtttccgtg aaaacatttt
    47521 cggtttcaga cggcatttcg acatcccgtt tcccgacaac cgtccgactt tccggaatca
    47581 ggcgcgaaat ccgcgcctcc gcagaaaccg ttgccttgtt cggttctttc aaattgacgg
    47641 aaacgcggcg gcgggcatcg cggacggctg tgccgtctga aacggactgc ccttgggaaa
    47701 catccgggga ttttgcctcc gcctgccctt tctcctgccc tgcatgacgg cggaacggcg
    47761 cattccgtgc attttcggct ttgactgcag aaaaggcaga cggatgctgc ttctcaaaat
    47821 acggctcaaa tccgtaatcc gcagactcgg aaaacgcttc tttgtccgca tcaaacatac
    47881 gggaatacgt gcgttgaagc acagggtcgt ccaaaccgat aatctgcagc ccttccatcg
    47941 gggtatcgga cacgcgtact ttggggacgg ctgttccgtt tttctcaaat gcatcgatat
    48001 agcgtttttt cgtttccctt aaagccgcgc tgcttaaagc acgcgttgct tcttccaaag
    48061 tgatttcctt aaaaaccgga cggacgggcg aagttttgct ttcagactgc atcaaccctt
    48121 cagcaatact ccggtcgaat gggatgcggc ggttgtcgat tacggcagtt gcaatgtctt
    48181 ccgtatcggc agcctcttcc tccgcagctt ctgctgcttc cgtttccgct tcttccgtcc
    48241 cgtttccact gtctgaatac ccgtcggatg cggtcggaac atccgcacgg tttgcagaag
    48301 caggcggaac gggcctgtcc ggttcggatt cgtgcgccag atagtttcgg cagaaacgga
    48361 cgacaccgac aaacagccaa tacactgccg ttttgacggc atggaaaagc atcagggaaa
    48421 actcgggaaa atcgggcata ccgtctttga tttcaggcag ctccgcctgt ttttcccctt
    48481 tcttttcctg ccacgcagaa acctcgcgca tccactcgcg ttcggattgt gcgcggacaa
    48541 aaaacaggcc ggcaagcgca agcaacaaaa taacgatcaa aactatccaa aacatatgcc
    48601 gtttcccgca agacaaacga ttaaccgagt ttattttaac gtgtttccag cccaaaaaaa
    48661 acaaccggcc ggcaattctg ccgaaaccga ttcggctttc ggtttgcccc cgccgacagt
    48721 ataatagccg ccccttccct taatctttgc ggcattacca tgattttcca aacagtctgg
    48781 ttttcagatg tggtactgtc ggtttcgtgg attgtcctta tcctgatact ggcagcttcc
    48841 gcgccgtcgg cattccgttc gcttgcccgc taccgttccg cccttcccct gtgtaccgta
    48901 attttttccg cagcatggtg tctgaacgcc tctgtcggcg gcggacagct tgcccagatg
    48961 aactaccacc tgcttgccgt caatctggtt acactgatgg tggatacctc cgccgccctt
    49021 tggcttgccg cgctgctgat gctgccctac tgcctgctgt ttgccggttc tgccggcgca
    49081 tatccgccga acgctttggt gctgatactg cccgcgcttg tcgtcaaccg cctgtcgcgt
    49141 atgctggtca accgtctgcc gcccaatatt ttcatcttta ttttcgtcaa cggctttctc
    49201 gcttccgccg ccggcattct gctgaccggg ctggtgctga tcggtatttt ggatgccgca
    49261 aacgcttttc cgtccgaaat attgtggacg gccgccctgc ccgtctttat tctgctggcg
    49321 tgggcggaag ccttcctcag cggcatttca actgccattt tcgtggcact gaagccccat
    49381 tggatcaaca ctttcgacga caaccgctat ctgaagtccg agcgcggcat atggctgtag
    49441 ccttcagacg gcataggcag acaaaaccat gctttccaac atcctccccc tttccatcgg
    49501 tgcaatattc ggcacaacgg cgcgttggct gctcaacctc gccgtccccg catcgttgtc
    49561 tcccgccaca ggcaacctgt ttgccaactg gacgggcgcg ctgctcatcg gcatctttgc
    49621 cgaaaccgtc agccatccgc aatggaagct gctgctgatt accggttttt tcggcagcct
    49681 gaccacgctt tccggatttt cactggaaac cgtaaccctg ctccaatcga accgtcccgc
    49741 ttcggcactt gccaatattt tcctacacac ggcaggttcg ctgctgctga cttggctcgg
    49801 gctgaagata gggactgcag tcaaataacc gcaaaaaatt gcttcctttg gttttgacat
    49861 aatctataaa ttggcttcgc ttgtttaaat actgcctgtg ccaattatag tggattaaat
    49921 ttaaatcagg acaaggcggc gagccgcaga cagtacagat agtacggcaa ggcgaggcaa
    49981 cgccgtaccg gtttaaattt aatccactat accgttctca aattcaaatt gggcttttag
    50041 gtctataaca aagaaaaagc cttgggagga taaacctacc aaggcttttt cttaaaaaac
    50101 gctctatcac tgtgcctaaa aatgcaaaaa agtaaccgtc ataatccttt tgccaaaatc
    50161 aatatcatca tccgatgaat gaacggacgg tatataagaa agcgttaata aactcataaa
    50221 ccagtaagaa aaatcagtaa cgaagatatt cattattacc cattcttaaa aattatcacg
    50281 ttcgtttggg taattatcat acccttttcc ctcttattac taaagcacga attactttaa
    50341 agtacgcacc cagagacaag ccgaaaaggc atatccgatc cgccaaacaa aatgcccgcc
    50401 gacttactcc ggcgggcggt tccaacatcc tgtcaatcct tcatcagcca gtattgcaaa
    50461 ccgattaatg ttttaccgtc tttaatttca tcgtttgcca atgcctgacg gacttcatct
    50521 ttcgacatca gcacggtttc cgttatttca tcttcatcat tagaaagcgt actgcccaag
    50581 cgcacgcctt ccgcctcgaa cagatacatt ttttcattgc aaaaaccgac cgccgtataa
    50641 aaactgtaca gcaggcgcac gctgtcggca acataaggcg tttcctccgc caattctcgc
    50701 agcgcacacg ctgccatatc ctcgcccgcc acatccagct tgcccgcagg aagttccaat
    50761 gtcgcctgat ttgccgcata acgccactgc cgcaccaaaa cgaccttttc gtcatccgtt
    50821 accgccaaca cgcacgccgc gcccggatgc cggatgacga tgcgctgccc ttcattgccg
    50881 ttgggcagcc tgaccttatc cctgctgata ctgacgaaac cgccctcgta aatggtttcg
    50941 ccgcctaatt ttacttccct caaatccact tcatatctcc tttccgtttc ctattctgcc
    51001 gttcaatctt cacgcttgcc gcgctcgatt tccactccaa cctcgcgcac gccttccaaa
    51061 atacccggct tgacgatttt cacgtgcacc cacaccgcgc cgaaatatcc caaaaccaaa
    51121 tcggcaatat attccgccaa cgcttccaaa agcaggaaat cctgttcttt cagatgtcgg
    51181 cgcagcgttt cgcatacctc ggcataatgc accgtattgg caatatcgtc gtccgaaccc
    51241 gctttctcgg gaacgccgat gtccaaatcg acaatcaggg tctgcaaccg ttcgcgttcc
    51301 cagccgtaca cgccgataag cgtatccgcc ttcatgccgt gcaaaaagat tttatccata
    51361 atccgccccg ttttttgcta aaataaccgc accattctaa gtaaagtacc gcaaatgttc
    51421 aacataccgg ccgtcgccgt ttcctattta atcggttcac tttctttcgc cgtcatcgtt
    51481 tccaagtatt acgggatgga cgacccgcgc acctacggat cgggcaatcc cggcgcgacc
    51541 aatgttttac gcagcggcaa aaaaaaggcg gccgcgctga cgctcttggg cgatgccgcc
    51601 aaaggtttgg ttgccgtttt gcttgcacgc gtgcttcaag aaccgctcgg tttatccgac
    51661 agcgcaatcg ccgccgtcgc actcgccgcg ctggtcgggc atatgtggcc ggtgtttttc
    51721 ggatttaagg gcggcaaagg cgtggcaacg gcattgggcg tgcttctggc actctctcct
    51781 gcaactgcct tggtctgcgc gttgatttgg cttgtgatgg cattcggctt caaagtatcc
    51841 tcccttgccg cgctggtcgc cacaaccgcc gccccccttg ccgcactgtt ttttatgccg
    51901 catacttctt ggattttcgc aaccctcgca atcgccatat tggtgttgct ccgccataag
    51961 agcaacatcc tcaacctgat taaaggcaaa gaaagcaaaa tcggcgaaaa acgctgattc
    52021 ggcatttgtt ttccattacg tcatgccgtc tgaaaccatg ttcccgcgtt cagacggcat
    52081 ttccgcacaa acggctttca tacataccat gctcagttac agacacgcat tccacgccgg
    52141 caaccacgcc gatatgctca aacacttcac cttgttttta gtgctgcaat atttcaaccg
    52201 caaagacaag ccctactggt acatcgacac gcacggcggc gcgggtttgt acaatctcga
    52261 aggcagcgag gcgcagaaag tcggcgaata ccggcaaggc atcgccctgc tccgacaggc
    52321 gcaaaacctg cctgccgaac tctctgactt tgccgcgcac atacaaaaaa tcctaccctc
    52381 gcccgaactt tactgcggct ctccgtggct ggcgcaatcg ctgatccgca tcggcgacaa
    52441 attgcgcctg tttgagctgc accctgccga ctttgtccat ctgcaaaaca atatgggcga
    52501 agcgggattg ggcaaacgcg gacaagtgtt gcgcgaagac ggttacaaag ggctgatttc
    52561 cctgctgccg cccccgccgc gacgcgctgt tattctcatc gacccgccct atgaggaaaa
    52621 acaggactac cggcgtgtaa cggaaacgct gaaagccgct ttaaaacggt ttgagtccgg
    52681 ctgttatctc atttggtatc cctgcctcag ccgcgaagaa agccgcaagc tgccggaaga
    52741 attgaaaaaa ctcctgcccg acaactacct ttacgccgaa ctgcacgtcc acgcgccgaa
    52801 aaccgacggt ttcggtatgc acggcagcgg aatgttcgtc atcaatccgc cctatttgtt
    52861 ggcggaacaa ttggcggcaa acctccccgc cctgacacgg ctgcttgcac aagacgaagg
    52921 cgcgcgctac cttttggaca gcaaaatccg ctgaccccga tgccgtctga acccttcaga
    52981 cggcatcttc cgtcaaacaa acaaaaccgg gcgatacaca ctccatatcg tccggttctg
    53041 cataaaacca gtattcaaaa atcagaacac gcttttcatt acacccacgg taccaaccac
    53101 accgttcagc agcatcagac caccggcagc cgtacccata ccttgacgga ttgcgtcatg
    53161 cttattggca cgtttttcac gttccaaagc caactcctca gaaacatttt tacgttgacg
    53221 gcggtgttgc gccagttccg cacggctaat tcgcgcttcg gcacggttac gaccagcctt
    53281 gattacggcc gaatcgtcgc cgatagcata gttggctaca gaattttcag aagcgcaggc
    53341 agcaagcaaa acggcacaca cagcaacaac ggaaatattt ttcaagtttt tcatacctgt
    53401 cctattatct caaaatgaag aaaaaactaa tccaactgga gttttatcgg ataaaataaa
    53461 tattgggtga attttcgttt gcctttttga tggcgcgtgc cgcatccatc atttcttccc
    53521 ggcgttcttt acggtattcg gcacgctcgg cacgctcgct tatctgaatg gcacgacttt
    53581 tcgcctgtat ttccgctgca gattcttgag ttacaaaacg gcggtctgcg taagtacatg
    53641 ccgtcaccaa catcgcagcc accgacaaca aaatcagttt cttcattttc atctacctat
    53701 ataagtttat t
//
LOCUS       DAXFZM010000002        51705 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.002, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000002 DAXFZM010000000
VERSION     DAXFZM010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 51705)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 51705)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..51705
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.002"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            155..448
                     /locus_tag="ACFJAG_000056"
     CDS             155..448
                     /locus_tag="ACFJAG_000056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979473.1"
                     /translation="MKTLVLLLLSFSTTTAFAAYGLGLGQAPKYPAGFRAYGYVYSGR
                     QGWVLKTEADAIKLDTLFKRFVYRPSAANQNPVGQAVGQRSDGIPANHTKEKP"
     gene            445..1488
                     /gene="argC"
                     /locus_tag="ACFJAG_000057"
     CDS             445..1488
                     /gene="argC"
                     /locus_tag="ACFJAG_000057"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003942 -
                     N-acetyl-gamma-glutamyl-phosphate reductase activity
                     [Evidence IEA];
                     GO_function: GO:0070401 - NADP+ binding [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HFC3979474.1"
                     /translation="MSKKIKAGIVGATGYTGVELLRLLAAHPDVEVAAVTSRSEAGTA
                     VADYFPSLRGVYGLAFQTPDEAGLEQCDIVFFATPNGIAMKDAPRLIEQGVRVIDLSA
                     DFRIRDIPTWEHWYGMTHAAPGLVSQAVYGLSELNREAVAQARLVANPGCYPTCVSLP
                     LVPLLRQCRLKPGMPLIADCKSGVSGAGRKGNVGSLLCEAGDNFKAYGTAGHRHLPEI
                     RQTIAGLQDGIAEGFVFTPHLAPMIRGMHATVYLHLSDGSDPETVLRDYYRDSPFMDI
                     LPAGSTPETRSVRGANLCRISIRQAAQSDVWVVLSVIDNLVKGAAGQAVQNMNIMFGL
                     EETHGLGGIPLLP"
     gene            complement(2082..4124)
                     /gene="recG"
                     /locus_tag="ACFJAG_000058"
     CDS             complement(2082..4124)
                     /gene="recG"
                     /locus_tag="ACFJAG_000058"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HFC3979475.1"
                     /translation="MMSPETQKQLKITDVSAKKLDKLNLHTAWDLVLHLPLRYEDETH
                     IMPIKDAPIGVPCQVEGEVIHQEVTFKPRKQLIVQIADGSGSVLFLRFIHFYASHQKQ
                     TAVGKRIRAVGEIKHGFYGDEMIHPKIRDAEGGGLAESLTPVYPTVNGLNQPTLRRII
                     QTALDVTPLHDTLPDALLGRLKLPRLAESLRLLHSPPPSFTIHQLSDGTLPAWQRLKF
                     DELLAQQLSMRLARQKRVSGTAAALRGDGTLTQALRQALPFALTDAQEKVVSEICRDM
                     AQTHPMHRLLQGDVGSGKTIVAALSALTAIESGAQVAVMAPTEILAEQHFIKFKQWLE
                     PLGIEVVCLFGSLRKKAKDEAKAKLADGSVKIAVGTHALFSDGVAFHNLGLSIVDEQH
                     RFGVAQRLALKNKGREVHQLMMSATPIPRTLAMSFFADLDVSVIDELPPGRTPIKTRL
                     VNNVRRAEVEGFVLGTCRKGRQAYWVCPLIEESETLQLQTAAETLARLQTALPEPNIG
                     LVHGRMKAAEKAEVMAEFAAGRLNVLVATTVIEVGVDVPNAALMVIEHAERMGLAQLH
                     QLRGRVGRGAGESVCVLLFAEPLGELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLG
                     ARQSGVPMLRFAKLEEDLHLLEQARETAPMLIEQNPEIVEAHLARWLSGREGYLGV"
     gene            complement(4210..4653)
                     /gene="secB"
                     /locus_tag="ACFJAG_000059"
     CDS             complement(4210..4653)
                     /gene="secB"
                     /locus_tag="ACFJAG_000059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-export chaperone SecB"
                     /protein_id="HFC3979476.1"
                     /translation="MSEELQPVFSIERLYVKDLSLEVPHAPQIFLEQGDPEVDMRVST
                     GSQKLEDGYYDVDVTVTVTAKLDNERTMFLNEVTQSGIFRLENIPEEDVQLLLGVACP
                     NILFPYAREAVSGTVTRAGFPPVLLAPINFEAIYQQQQEAEAAGA"
     gene            complement(4674..4931)
                     /gene="grxC"
                     /locus_tag="ACFJAG_000060"
     CDS             complement(4674..4931)
                     /gene="grxC"
                     /locus_tag="ACFJAG_000060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 3"
                     /protein_id="HFC3979477.1"
                     /translation="MQTVTMYTGPFCPYCAMAKRLLHAAGVGHIDEIRVDASPEAFAE
                     MQRLSGQRSVPQIFIGETHVGGFTDLYRLQQEGGLDGLLNP"
     gene            5150..6643
                     /gene="rng"
                     /locus_tag="ACFJAG_000061"
     CDS             5150..6643
                     /gene="rng"
                     /locus_tag="ACFJAG_000061"
                     /EC_number="3.1.26.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease G"
                     /protein_id="HFC3979478.1"
                     /translation="MLSGLPIPKDIARPPETILVNITPQETRVAVLEENNICELHIER
                     NSGHSLVGNIYLGVVRRVLPGMQSAFIDIGLERAAFLHIVDVLEQRRNPEETQRIEHM
                     LFEGQSVLVQVIKDPINTKGARLSTQISLAGRFLVHLPQEDHIGVSQRIEDDAERSSL
                     RERLDKLLPENACRGYIIRTNAENATDEQLQSDIDYLTKVWEHIQEQAKIRPPETLLY
                     QDLPLSLRVLRDMVGCDTQKILVDSTVNHGRMTRFAEQYVHGALGRIELFKGERPLFE
                     THNIEQEISRALQPRVNLNFGSYLIIESTEAMTTIDVNTGGFVGARNFDETIFRTNLE
                     ACHTIARELRLRNLGGIIIIDFIDMAQESHREAVLQELAKALAFDRTRVTLHGFTSLG
                     LVELTRKRSRENLNQVLCEPCPSCQGRGRLKTPQTVCYEIQREIVREARRYDAESFRI
                     LAAPNVIDLFLDEESQSLAMLIDFIGKPISLAVETAYTQEQYDIVLM"
     gene            complement(6678..7928)
                     /locus_tag="ACFJAG_000062"
     CDS             complement(6678..7928)
                     /locus_tag="ACFJAG_000062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HFC3979479.1"
                     /translation="MFVPLAMLAGMFSYYETFHETEALQDDLLRQAALYVGPDSRPET
                     LPEGDGDTRIFVQMPRQEDPVVSLPAHLADGLHTLRADGDDDYYRAYIRTTEQGRIAV
                     MQENEYREDLAADAARQSVLPLLAALPLMILLTVWITHKAMRPVRKLSQSLEQRRING
                     LSALSVYNIPSKIRGFVTGINLLLKRVDEDIRRRQRFVADAAHELRTPMTALSLQAER
                     LNNMPLPPDAGRQSAVLQQSIRRNKHLLEQLLALARSQSDETPLTKTTFGLQSRFRQV
                     LQELMPLALEKRQDIGVAVGGDVEVSADETEIYTLVKTFADNAVCYTPPEGRIDLGFT
                     DEGKYLAVWVEDNGNGIPESECARVLDPFYRILGTEQQGAGLGLSIADTLAKKYGGYL
                     ELTDSRRFGHGLLIRALLDKETLK"
     gene            complement(8010..8687)
                     /locus_tag="ACFJAG_000063"
     CDS             complement(8010..8687)
                     /locus_tag="ACFJAG_000063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HFC3979480.1"
                     /translation="MRVLLVEDDAMIAEAVSASLKDGGYAVDWVKNGAQVAAAAAAQP
                     YDLMLLLDLGLPGRDGLDVLSEIRAAGCTVPVLIVTARDDLYSRLNGLDGGADDYIVK
                     PFDMAEFKARMRAVLRRGSGQAQACLSNGALSLNPATYQVEIIAEGRQVALSNQEFSV
                     LQALLARPGVILSRSDSEDKVYGWGGEVESNAVDFLIHGLCKKLGKESIQNVRGVGWL
                     MPRQDAV"
     gene            complement(8910..10223)
                     /locus_tag="ACFJAG_000064"
     CDS             complement(8910..10223)
                     /locus_tag="ACFJAG_000064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CitMHS family transporter"
                     /protein_id="HFC3979481.1"
                     /translation="MLTFIGLLIIGVIVWLLLTEKVSPIIALILVPLIGALLAGFDVS
                     QLKEFYSGGTKSVTQIVIMFMFSILFFGIMNDVGLFRPMIGGLIKLTRGNIVAVSVGT
                     VLVSVVAQLDGAGATTFLSVVPALLPLYKRLHMNPYLLFLLLTSSAGLINLLPRGGPI
                     GRVASVLGADVGELYKPLLTVQIIGVVFILVLSLFLGVREKRRIVRELGALPAVADLI
                     KPAPLSEEEQKLARPKLFWWNVLLFLAAMSLLFSGIFPPGYVFMLAATAALLLNYRSP
                     QEQMERIYAHAGGAVMMASIILAAGTFLGILKGAGMLDAISKDLVHILPDALLPYLHI
                     AIGVLGIPLELVLSTDAYYFGLFPIVEQITSQAGVAPEAAGYAMLIGSIVGTFVTPLS
                     PALWMGLGLAKLSMGKHIRYSFFWAWGLSLAILISSIAAGIVPLP"
     gene            complement(10601..11173)
                     /locus_tag="ACFJAG_000065"
     CDS             complement(10601..11173)
                     /locus_tag="ACFJAG_000065"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008752 - FMN reductase (NAD(P)H) activity
                     [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0052873 - FMN reductase (NADPH) activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent FMN reductase"
                     /protein_id="HFC3979482.1"
                     /translation="MIVAKKISILVGSLRRASFARKVALNAAEMFPEGWQAEIVEIGH
                     LPLYNFDYDDPAVEDVPLPESYTAFRETIKASDGILFVTSENNRTIPACLKNAVDIGS
                     KPNADVAWKNKPAGIISHSVGKMGGYSSQKNLRLALSYFDMPVTGQPEVFLGNSPTLF
                     DENGKLIDSARDFVQSYINQFVGLIERNAK"
     gene            11332..12741
                     /gene="dacB"
                     /locus_tag="ACFJAG_000066"
     CDS             11332..12741
                     /gene="dacB"
                     /locus_tag="ACFJAG_000066"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004175 - endopeptidase activity [Evidence
                     IEA];
                     GO_function: GO:0009002 - serine-type D-Ala-D-Ala
                     carboxypeptidase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine
                     carboxypeptidase/D-alanyl-D-alanine-endopeptidase"
                     /protein_id="HFC3979483.1"
                     /translation="MNFPKTAASLLLLLASLAAHALDTGRIPQNEIAVYVQELDSGKV
                     IIDHRAGIPVNPASTMKLVTAFAAFKTFGSNYRWATEFKSNGTVNDGTLDGNLYWAGS
                     GDPVFNQENLLAVQRQLRDKGIRNITGRLMLDHSLWGEVGSPDHFEADSGSPFMTPPN
                     PTMLSAGMVMVRAERNAAGSTDILTDPPLPHIFAQNNLKITASQAACPSVKKLMRASF
                     SGNTLKLRGNIPESCLGKPVGVRMFALDELIRQSFTNRWLLGGGRISDGIGIADTPEG
                     AQTLAVAHAKPMKEILTDMNKRSDNLIARSVFLKLGGDGKLPAVSEQAASAVRRELAV
                     SGIDVADLVLENGSGLSRKERVTARMMAQMLETAYFSPFAQDFIDTLPIAGTDGTLRN
                     RFKQSGGLLRLKTGTLNNVRALAGYWLGDKPMAVVVIINSGRAVSLLPDLDNFVAKNI
                     ISGGDGWLDAKLMCKERRA"
     gene            complement(12806..13975)
                     /gene="metK"
                     /locus_tag="ACFJAG_000067"
     CDS             complement(12806..13975)
                     /gene="metK"
                     /locus_tag="ACFJAG_000067"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004478 - methionine adenosyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006556 - S-adenosylmethionine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HFC3979484.1"
                     /translation="MSEYLFTSESVSEGHPDKVADQVSDAILDAILAQDPKARVAAET
                     LVNTGLCVLAGEITTTAQVDYIKVARETIKRIGYNSSELGFDANGCAVGVYYDQQSPD
                     IAQGVNEGEGIDLNQGAGDQGLMFGYACDETPTLMPFAIYYSHRLMQRQSELRKDGRL
                     PWLRPDAKAQLTVVYDSETGKVKRIDTVVLSTQHDPAISHEELSKAVIEQIIKPVLPP
                     ELLTDETKYLINPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVD
                     RSAAYACRYVAKNIVAAGLATQCQIQVSYAIGVAEPTSISIDTFGTGKISEEKLIALV
                     CEHFDLRPKGIVQMLDLLRPIYGKSAAYGHFGREEPEFTWERTDKAASLKAAAGL"
     regulatory      complement(14158..14268)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01725"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="SAM-I-IV-variant riboswitch; SAM riboswitches
                     modulate the expression of downstream genes in response to
                     levels of S-adenosylmethionine; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF01725"
     gene            14321..15214
                     /locus_tag="ACFJAG_000068"
     CDS             14321..15214
                     /locus_tag="ACFJAG_000068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HFC3979485.1"
                     /translation="MFRLQFRLFPPLRTAMHILLTALLKCLSLLSLSCLHTLGNRLGH
                     LAFYLLKEDRARIVANMRQAGLNPDTQTVKAVFAETAKCGLELAPAFFKKPEDIETMF
                     KAVHGWEHVQQALDKGEGLLFITPHIGSYDLGGRYISQQLPFHLTAMYKPPKIKAIDK
                     IMQAGRVRGKGKTAPTGIQGVKQIIKALRAGEATIILPDHVPSPQEGGGVWADFFGKP
                     AYTMTLAAKLAHVKGVKTLFFCCERLPDGQGFVLHIRPVQGELNGNKAHDAAVFNRNT
                     EYWIRRFPTQYLFMYNRYKTP"
     gene            complement(15259..16323)
                     /gene="tsaD"
                     /locus_tag="ACFJAG_000069"
     CDS             complement(15259..16323)
                     /gene="tsaD"
                     /locus_tag="ACFJAG_000069"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0002949 - tRNA threonylcarbamoyladenosine
                     modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HFC3979486.1"
                     /translation="MLVLGIESSCDETGVALYDTERGLRSHCLHTQMAMHAEYGGVVP
                     ELASRDHIRRLVPLTEGCLAQAGASYGDIDAVAFTQGPGLGGALLAGSSYANALALAL
                     DKPVIPVHHLEGHLLSPLLAEEKPDFPFVALLVSGGHTQIMAVRGIGDYELLGESVDD
                     AAGEAFDKTAKLLGLPYPGGAKLSELAESGRPEAFVFPRPMIHSDDLQMSFSGLKTAV
                     LTAVEKVREANGSETIPEQTRNNICRAFQDAVVEVLEAKVKKALLQTGFRTVVVAGGV
                     GANRKLRETFGNMTVQIPTPKGKPKHPSEKVSVFFPPMAYCTDNGAMIAFAGAMHLGK
                     GREVGAFNVRPRWSLSEIVK"
     gene            complement(16439..17626)
                     /gene="ccsB"
                     /locus_tag="ACFJAG_000070"
     CDS             complement(16439..17626)
                     /gene="ccsB"
                     /locus_tag="ACFJAG_000070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome biogenesis protein CcsB"
                     /protein_id="HFC3979487.1"
                     /translation="MTEHYKTLPEHELLIQKSLIRNLNLWDWVFAVLVFAATVFVQTR
                     SGMHMDIYETVMLWASAGIAVFLGWFFKPMRWFVPLSVLLAYAAVGLYGGNIKSAEIF
                     LLRYFLSSQSAIMWQCAFVFFALFAYISGAVLASVKNVPTNTLLNMGTAFAWVSAVAG
                     FTGLLVRWHESYLLRPDAGHIPVSNLYEVFILFLVITALMYLYYEGKFAVQKLGGFVF
                     GFMAVVVGFVLWYSVSREAHTIQPLIPALQSWWMKIHVPANFIGYGAFCISAMLGIAE
                     LVSLRAEEKGGKLWLPPSALIDEVMYKAIAVGFLFFTIATVLGALWAADAWGRYWSWD
                     PKETWAFIVWLNYAVWLHLRLVAGWRGKVLAWWAIIGLFVTAFAFIGVNMFLSGLHSY
                     GTL"
     gene            complement(17619..19571)
                     /locus_tag="ACFJAG_000071"
     CDS             complement(17619..19571)
                     /locus_tag="ACFJAG_000071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein ResB"
                     /protein_id="HFC3979488.1"
                     /translation="MRFAVALLSLLGIASVIGTVLQQNQPQTDYLVKFGPFWTRIFDF
                     LGLYDVYASAWFVVIMMFLVVSTSLCLIRNVPPFWREMKSFREKVKEKSLAAMRHSSL
                     LDVKIAPEVAKRYLEVRGFQGKTVSREDGSVLIAAKKGTMNKWGYIFAHVALIVICLG
                     GLIDSNLLLKLGMLAGRIVPDNQAVYAKDFKPESILGASNLSFRGNVNISEGQSADVV
                     FLNADNGMLVQDLPFEVKLKKFHIDFYNTGMPRDFASDIEVTDKGTGEKLERTIRVNH
                     PLTLHGITIYQASFADGGSDLTFKAWNLRDASREPVVLKATSIHQFPLEIGKHKYRLE
                     FDQFTSMNVEDMSEGAEREKSLKSTLNDVRAVTQEGKKYTNIGPSIVYRIRDAAGQAV
                     EYKNYMLPILQDKDYFWLTGTRSGLQQQYRWLRIPLDKQLKADTFMALREFLKDGEGR
                     KRLVADATKDAPAEIREQFMLAAENTLNIFAQKGYLGLDEFITSNIPKGQQDKMQGYF
                     YEMLYGVMNAALDETIRRYGLPEWRQDEARNRFLLHSMDAYTGLTEYPAPMLLQLDGF
                     SEVRSSGLQMTRSPGALLVYLGSVLLVLGTVFMFYVREKRAWVLFSDGKIRFAMSSAR
                     SERDLQKEFPKHVESLQRLGKDLNHD"
     gene            complement(19849..20472)
                     /locus_tag="ACFJAG_000072"
     CDS             complement(19849..20472)
                     /locus_tag="ACFJAG_000072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HFC3979489.1"
                     /translation="MRRLTLLAFVLAAGAVSASPKADVEKGKQVAATVCAACHAADGN
                     SGIAMYPRLAAQHTAYIYHQTIGIRDGKRTHGSAAVMKPVVMNLSDQDILNVSAFYAK
                     QQPKSGEANPKENPELGAKIYRGGLSDKKVPACMSCHGPSGAGMPGGGSEIQAYPRLG
                     GQHQAYIVEQMNAYKSGQRKNTIMEDIANRMSEEDLKAVANFIQGLR"
     gene            20679..21308
                     /gene="yihA"
                     /locus_tag="ACFJAG_000073"
     CDS             20679..21308
                     /gene="yihA"
                     /locus_tag="ACFJAG_000073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTP-binding protein
                     YihA/YsxC"
                     /protein_id="HFC3979490.1"
                     /translation="MNLFQNAKFFTTVNHLKDLPDTPLEIAFVGRSNAGKSSAINTLT
                     NHVRLAYVSKTPGRTQHINFFELQNGNFMVDLPGYGYAQVPEAVRAHWVNLLGDYLRH
                     RKQLIGLVLIMDARHPLKELDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLSQVK
                     KLLKPYSDRQNISVQLFSSLKKQGIDEANRTVGSWFDAADAAASSPEEN"
     gene            complement(21428..23824)
                     /locus_tag="ACFJAG_000074"
     CDS             complement(21428..23824)
                     /locus_tag="ACFJAG_000074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1A"
                     /protein_id="HFC3979491.1"
                     /translation="MIKKILTTCFGLFFGFCVFGVGLVAIAILVTYPKLPSLDSLQHY
                     QPKMPLTIYSADGEVIGMYGEQRREFTKIGDFPEVLRNAVIAAEDKRFYRHWGVDVWG
                     VARAAVGNVVSGSVQSGASTITQQVAKNFYLSSEKTFTRKFNEVLLAYKIEQSLSKDK
                     ILELYFNQIYLGQRAYGFASAAQIYFNKNVRDLTLAEAAMLAGLPKAPSAYNPIVNPE
                     RAKLRQKYILNNMLEEKMITVQQRDQALNEELHYERFVRKIDQSALYVAEMVRRELYE
                     KYGEDAYTQGFKVYTTVRTDHQKAATEALRKALRNFDRGSSYRGAENYIDLSKSEDVE
                     ETVSQYLSGLYTVDKMVPAVVLDVTKKKNVVIQLPGGRRVALDRRALGFAARAVDNEK
                     MGEDRIRRGAVIRVKNNGGRWAVVQEPLPQGALVSLDAKTGAVRALVGGYDFHSKTFN
                     RAVQAMRQPGSTFKPFVYSAALSKGMTASTVVNDAPISLPGKGPNGSVWTPKNSDGRY
                     SGYITLRQALTASKNMVSIRILMSIGVGYAQQYIRRFGFRPSELPASLSMALGTGETT
                     PLKVAEAYSVFANGGYRVSSHVIDKIYDRDGRLRAQMQPLVAGQNAPQAIDPRNAYIM
                     YKIMQDVVRVGTARGAAALGRTDIAGKTGTTNDNKDAWFVGFNPDVVTAVYIGFDKPK
                     SMGRAGYGGTIAVPVWVDYMRFALKGKQGKGMKMPEGVVSSNGEYYMKERMVTDPGLM
                     LDNSGIAPQPSRRAKEDDEAAVENEQQGRSDETRQDVQETPVLPSNTDSKQQQLDSLF
                     "
     gene            23976..25091
                     /gene="pilM"
                     /locus_tag="ACFJAG_000075"
     CDS             23976..25091
                     /gene="pilM"
                     /locus_tag="ACFJAG_000075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0043683 - type IV pilus assembly [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus biogenesis protein PilM"
                     /protein_id="HFC3979492.1"
                     /translation="MRLFKSLKNPKKTDAKLPKKSSGLNNRAAIGIDIDQHSIKMVQL
                     SGRSLNQIQLEKYVIAKLPKNIIQGNKVQNYDQLVTYLQQAYAKLGTSCKNIVASVPQ
                     NLATIEQLTYTAKDAELDLQGFVESSISEASSISLEEANYDYQVLSQSAVGEAVLSVA
                     SRKDEIEPLIDAFNAAGMKLSALDVDIFGQYNAYALWINHFAPELADEKVAIFGVYAA
                     QTYALVIQDGKILYKQETSVSEEQLNQLIQRTYQVTAEKAEEIINSPQKPSDYQESVA
                     NYFNQQITQEIQRVLQFYYTTQTADDMTDIKHILLTGEAVRQKGIAQTVASQTNADVQ
                     CVHPARYFANDLKTDEQQFELDAPTLTKAFGLAVRGL"
     gene            25094..25693
                     /locus_tag="ACFJAG_000076"
     CDS             25094..25693
                     /locus_tag="ACFJAG_000076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilN domain-containing protein"
                     /protein_id="HFC3979493.1"
                     /translation="MNNLIKINLLPYREEMNKRKQQQFKTLMYGAVLTGVAAVAATYL
                     FIDNMINKQSEKNTLLEISIAHLDTELSEIQKLKQEKDAFLIKKNKIGELQIKRLQAA
                     KILDSLNEAVPGSTYLTSLDAVTADSYRLSGRTSSDNRVAAMMRAMPNTGIFKQPELL
                     SIKKNNSHQEFTLQATLQPIVKAAESKENPASGNAQEAN"
     gene            25694..26341
                     /locus_tag="ACFJAG_000077"
     CDS             25694..26341
                     /locus_tag="ACFJAG_000077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 4a pilus biogenesis protein PilO"
                     /protein_id="HFC3979494.1"
                     /translation="MASKSSKTNLDLNNLHLLNLPARLFIALLVVAAVLGLGYAGLFK
                     SQMESLEEYEAKETELKNTYKQKSIDAASLNNLRDELASIRSAFDIMLKQLPTDAEIP
                     NLVQELHQAGSSNGLRLDSVMPQPPVDDGPIKKLPYSISITGNYEQISQFTRDVGSLS
                     RIITLESLKIAQSSENGGNPDGKSSILNLSAIATTYQAKSVEELAAEAAQNAEQK"
     gene            26359..26904
                     /locus_tag="ACFJAG_000078"
     CDS             26359..26904
                     /locus_tag="ACFJAG_000078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilP"
                     /protein_id="HFC3979495.1"
                     /translation="MKHYALLISFLALSACSQNSEDLNEWMAQTRREAKAEIIPFQAP
                     TLPVAPVYSPPQLTGPNAFDFRRMETAKKGENAPDTKRIKETLEKFSLENMRYVGILK
                     SGQKVSGFIEAEGYVYTVGVGNYLGQNYGRIESITDDSIILNELIEDSTGNWVSRKAE
                     LLLNSSDKNTEQAAAPAAEQN"
     gene            26923..29118
                     /gene="pilQ"
                     /locus_tag="ACFJAG_000079"
     CDS             26923..29118
                     /gene="pilQ"
                     /locus_tag="ACFJAG_000079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009297 - pilus assembly [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus secretin PilQ"
                     /protein_id="HFC3979496.1"
                     /translation="MNTKLTKIISGLFVATAAFQTASAGNITDIKVSSLPNKQKIVKV
                     SFDKEIVNPTGFVTSSPARIALDFEQTGISMDQQVLEYADPLLSKISAAQNSSRARLV
                     LNLNKPGQYNTEVRGNKVWIFINESDDTVSAPARPAVKAAPAAPAKQQAAAPFTESVV
                     SVSAPFSPAKQQAAASAKQQAATPAKQTNIDFRKDGKNAGIIELAALGFAGQPDISQQ
                     HDHIIVTLKNHTLPTALQRSLDVADFKTPVQKVTLKRLNNDTQLIITTTGNWELVNKS
                     AAPGYFTFQVLPKKQNLESGGVNNAPKTFTGRKISLDFQDVEIRTILQILAKESGMNI
                     VASDSVSGKMTLSLKDVPWDQALDLVMQARNLDMRQQGNIVNIAPRDELLAKDKAFLQ
                     AEKDIADLGALYSQNFQLKYKNVEEFRSILRLDNADTTGNRNTLVSGRGSVLIDPATN
                     TLIVTDTRSVIEKFRKLIDELDVPAQQVMIEARIVEAADGFSRDLGVKFGATGRKKLK
                     NETSAFGWGVNSGFGGGDKWEAQTKINLPVAAAANSISLVRAISSGALNLELSASESL
                     SKTKTLANPRVLTQNRKEAKIESGYEIPFTVTTASGGGNSTNTELKKAVLGLTVTPNI
                     TPDGQIIMTVKINKDSPAQCASGNNTILCISTKSLNTQAMVENGGTLIVGGIYEENNG
                     NTLTKVPLLGDIPVIGNLFKTRGKKTDRRELLIFITPRIIDTAGNSLRY"
     gene            30387..30899
                     /locus_tag="ACFJAG_000080"
     CDS             30387..30899
                     /locus_tag="ACFJAG_000080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HFC3979497.1"
                     /translation="MKNFNGKLILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIAAAA
                     GVPIPTIFEMEGEQGFRSRETAILKKLIVLPHIVLSTGGGAVLKEENRALIRKSGTVV
                     YLHAPPETLLERTRCDNSRPLLQVADPLAKLRELYAARDPVYRQTADFTVESANCRET
                     VQTLLKRLSR"
     gene            30979..32058
                     /gene="aroB"
                     /locus_tag="ACFJAG_000081"
     CDS             30979..32058
                     /gene="aroB"
                     /locus_tag="ACFJAG_000081"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003856 - 3-dehydroquinate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HFC3979498.1"
                     /translation="MKTLTVHTPSHSYPIFIGNGLLPQAGSLLKPHLGKRAAIITNET
                     VAPLYLGTLQTALDAAGVSHFSIIPPDGEAHKNWQTLNLIFDGLMQNRAERKTTLIAL
                     GGGVIGDMVGFAAATYQRGAPFIQIPTTLLSQVDSSVGGKTAINHPLGKNMIGAFYQP
                     QAVLADLDTLHTLPARELSAGMAEVIKYGALGDIGFFEWLEQHMPELMALERAPLTQA
                     VYRCCQMKADIVAQDETEQGIRAWLNLGHTFGHAVEAEMGYGVWLHGEAVAAGCVLAA
                     RLSEQLGKTSAADTARLAALLEAAGLPSAPPVFAFEKWLAHMSHDKKISGGIMRFIGL
                     NRLGEAVITEITDTDILRRTLQPYL"
     gene            32797..33639
                     /locus_tag="ACFJAG_000082"
     CDS             32797..33639
                     /locus_tag="ACFJAG_000082"
                     /EC_number="2.4.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0006541 - glutamine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II glutamine amidotransferase"
                     /protein_id="HFC3979499.1"
                     /translation="MCQLLGMNCNTPTDIMFSFEGFRRRGGITDHHADGFGIGFFEGK
                     GVRLFHDDKPSANSPVADLVRAYQIKSENVVAHIRKASQGQTSLANTHPFMREMWGGY
                     WLFAHNGHLVDFFPEQGEFFHPVGTTDSERAFCHILNRLRTRFAARPDDDTLFDAIAG
                     LTHEIRKFGLFNFMLSDGISLFAHASTLLHYIVRQAPFGKARLLDDDVMVDFAEVTTP
                     DDRVAVISTLPLTRDESWSQLAVNELVMFREGNIVRHDRPENPVYMSAEEGLEIARAA
                     GVSV"
     gene            33668..34132
                     /locus_tag="ACFJAG_000083"
     CDS             33668..34132
                     /locus_tag="ACFJAG_000083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0140110 - transcription regulator activity
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NrdR"
                     /protein_id="HFC3979500.1"
                     /translation="MKCPFCSHPDTRVADSRLMEERNTVRRRRHCPGCGKRFGTLETV
                     ELKMPAVIGPDKKRSPFNAQRLRNDLTAAARKSALTPEQIDETVRLTEHRLYTSGQRD
                     ISSSELVEIVLEELFGQNTEAAVRFAALHKRFDSPEHFASWLAQAVKTGGKT"
     gene            34164..35273
                     /gene="ribD"
                     /locus_tag="ACFJAG_000084"
     CDS             34164..35273
                     /gene="ribD"
                     /locus_tag="ACFJAG_000084"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA];
                     GO_function: GO:0008835 -
                     diaminohydroxyphosphoribosylaminopyrimidine deaminase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HFC3979501.1"
                     /translation="MFSDTNISMMENALRLAALGRFSTSPNPRVGCVIAHGRQIVGQG
                     FHVKAGEPHAEVHALRQAGEMAKGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAA
                     MRDPNPPVAGKGLVLLKAAGIKTECGLLENKARELNRGFLSRIERRRPFVRLKCAVSL
                     DGKTALSDGSSFWITGEEARADVQVLRAESCAVLTGIGTVLADNPRLNVRAFPTLRQP
                     ARIVLDSRLRLPPNSHLVTDGQSPTLIATLERNEDRLRPYRKHAHVRILMPSETAGGK
                     IDLHRLMRLLAGEGYGEVMVEAGSELTSAFLAENLADEIVLYRSPKILGGGKDLFSLP
                     ENRAALSAPPLWTPVSSEILGHDIKTVFRKNGNAF"
     gene            35468..36889
                     /locus_tag="ACFJAG_000085"
     CDS             35468..36889
                     /locus_tag="ACFJAG_000085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide biosynthesis protein"
                     /protein_id="HFC3979502.1"
                     /translation="MDTKEILGYAAGSIGSAVLAVIILPLLSWYFPADDIGRIVLMQT
                     AAGLTVSVLCLGLDQAYVREYYAAADKDTLFKTLFLPPLLFSAAIAALLLSRPSLPSE
                     ILFSLDDAAAGIGLVLFELSFLPIRFLLLVLRMEGRALAFSSAQLVPKLAILLLLPLT
                     VGLLHFPANTAVLTTVYALANLAAAAFLLFQNRCRLKAVRRAPFSPAVLHRGLRYGIP
                     LALSSLAYWGLASADRLFLKKYAGLEQLGVYSMGISFGGAALLLQSIFSTVWTPYIFR
                     AIEENATPARLSATAESAAALLASALCLTGIFSPLASLLLPENYAAVRFTVVSCMLPP
                     LFYTLTEISGIGLNVVRKTRPIALATLGALAANLLLLGLAVPSGGTRGAAVACAASFW
                     LFFVFKTESSCRLWQPLKRLPLYMHTLFCLASSAAYTCFGTPANYPLFAGVWAAYLAG
                     CILRHRKNLHKLFHYLKKQGFPL"
     gene            37057..38298
                     /locus_tag="ACFJAG_000086"
     CDS             37057..38298
                     /locus_tag="ACFJAG_000086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NeuD/PglB/VioB family sugar acetyltransferase"
                     /protein_id="HFC3979503.1"
                     /translation="MSKAVKRLFDIIASASGLIVLSPVFLVLIYLIRKNLGSPVFFIR
                     ERPGKDGKPFKMVKFRSMRDALDSDGIPLPDSERLTPFGKKLRTASLDELPELWNVLK
                     GEMSLVGPRPLLMQYLPLYNKFQNRRHEMKPGITGWAQVNGRNALSWDEKFSCDVWYT
                     DNFSFWLDMKILFLTVKKVLIKEGISAQGEATMPPFAGNRKLAVIGAGGHGKVVAELA
                     AALGTYGEIVFLDDRTQGSVNGFPVIGTTLLLENSLSPEQFDITVAVGNNRIRRQITE
                     KAAALGFKLPVLIHPDATVSPSAIIGQGSVVMAKAVVQAGSVLKDGVIVNTAATVDHD
                     CLLDAFVHISPGAHLSGNTRIGEESRIGTGACSRQQTTVGSGVTAGAGAVIVCDIPDG
                     MTVAGNPAKPLTGKNPKTGTA"
     gene            38429..39604
                     /locus_tag="ACFJAG_000087"
     CDS             38429..39604
                     /locus_tag="ACFJAG_000087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HFC3979504.1"
                     /translation="MLNTALSPWPSFTQEEADAVSKVLLSNKVNYWTGSECREFEKEF
                     AAFAGTRYAVALSNGTLALDAALKAIGIGAGDDVIVTSRTFLASASCIVNAGANPVFA
                     DVDLNSQNISAETVKAVLTPNTKAVIVVHLAGMPAEMDGIMALAKEHDLWVIEDCAQA
                     HGATYKGKSVGSIGHVGAWSFCQDKIITTGGEGGMVTTNDKTLWEKMWAYKDHGKSYD
                     AVYHREHAPGFRWLHESFGTNWRMMEMQAVIGRIQLKHLPEWTARRQENAAKLAESLR
                     KFKSIRLIEVAGYIGHAQYKFYAFVKPEHLKDDWTRDRIVSELNARNVPCYQGGCSEV
                     YLEKAFDNTPWRPKERLKNAVELGGTALTFLVHPTLTDDEIAFCKKHIEAVLTEAAR"
     gene            39652..41562
                     /locus_tag="ACFJAG_000088"
     CDS             39652..41562
                     /locus_tag="ACFJAG_000088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis protein"
                     /protein_id="HFC3979505.1"
                     /translation="MNLETLIALPRNIKKICFLIHDFLMIFTAFWFTQSLKADYSDEW
                     FDFANWQSFLLTALLTITLFIRMGLYRAVTRFVSFHVLTTAFAGSLASAVLFFLNTLI
                     FEERLRLALPIVYFLLLFVSVTGSRMVLRGLLSDHQKKTHDPVIIYGAGRSGRQLLEA
                     VKQMREYSAAAFVDDNPKLWHTVIYDLAVYQPDAIAFLIERYGVEKILLAIPSATQEQ
                     RRRIISKLKAYPCEVLTIPGMKDLMDGKISIGTLKKISVSDLLGRDSVAPDDRLMNAD
                     TEGKTVMVTGAGGSIGSELCRQIIRRRPERLLLFELSEFALYTVEKELCEYCARNGIA
                     AEILPFLGSVQNRTLLTHIMTAFSVATVYHAAAYKHVPMVEFNTVEGIRNNIFGTLEC
                     ALAATASGVETFVLISTDKAVRPANTMGAGKRMAELCLQALAAEPGQKTRFSMVRFGN
                     VLGSSGSVVPLFEKQIAEGGPITLTHPDITRYFMTIPEAAQLVIQAGAMGRGGDVFVL
                     DMGESVRITDLARQMITLSGLKPKTPEQPDGDIEILITGLRPGEKLYEELLIGDNVRK
                     TGHPRIMTADETMLPWHELSALLDRIRTACDRYDQQAIRDLLVNAPTGFTPTGGICDL
                     LWVCETHRKNAV"
     gene            41618..42910
                     /locus_tag="ACFJAG_000089"
     CDS             41618..42910
                     /locus_tag="ACFJAG_000089"
                     /EC_number="2.6.1.66"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--pyruvate transaminase"
                     /protein_id="HFC3979506.1"
                     /translation="MQFSAFGEKFTQHSGILQLMDDLGDALKSDKPVNMLGGGNPARI
                     PEIDRAFADIFSKLAAEHAVENIGNYSNPQGDAALIDALTAFPNREYGWNLTVGNIAL
                     TNGSQNAFFYLFNLFGGKFKLSDDLSVEKAILLPLAPEYIGYADVHVEGRHFVSVKPK
                     IGNVEHEGEAGFFKYRVDFDALENLPELKAGKIGAICCSRPTNPTGNVLTDGEMARLD
                     ALAREHGIPPIIDNAYGMPFPNIIDSGVTLNWHENIILCFSLSKVGLPGVRTGIIVAA
                     PEAVKAVSSLNAIVNLAPTRFGAAIAAPLLESGEMKRLADQVIRPFYRNQAQTAVSLL
                     KRELGAYPMKIHKPEGAIFLWLWFENLPVSSQTLYEMLKAEGTLIIPGEHFFVGIDTQ
                     DYPHAGECIRMSIAQDAQTLEKGIAAIGKTVRKPYDNV"
     gene            complement(42962..43798)
                     /locus_tag="ACFJAG_000090"
     CDS             complement(42962..43798)
                     /locus_tag="ACFJAG_000090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HFC3979507.1"
                     /translation="MIDLHCHSTVSDGMLPPAEVVRLAHQNGCTLLALTDHDHTGGIS
                     EARAEADRLGLRLINGVEISVTWRGRTIHVVGLDFDEQDENLQNLLADVRKGRLKRLE
                     AIAAKLEKKGIGGAYDGALALAANKEMVSRTHVAEFLIKNGHVKNKRQAFTKYLGDGK
                     SCAVRHEWATLADCVSAVNGAGGMAVIAHPMRYDLSATAKRNLFEEFKNLGGAGIEVH
                     SGNCCKNDRLNYALLADRFGLLASAGSDFHRLDDFSGGILGACPDLPENCKPVRAHFS
                     RH"
     gene            complement(44093..44296)
                     /locus_tag="ACFJAG_000091"
     CDS             complement(44093..44296)
                     /locus_tag="ACFJAG_000091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979508.1"
                     /translation="MDTTLKHKAEALLGEPLLDEPVRPESWECCGSDCGEACIQTIYW
                     ADKACYDAQRKKLKEAGWPDDAV"
     gene            complement(44274..44507)
                     /locus_tag="ACFJAG_000092"
     CDS             complement(44274..44507)
                     /locus_tag="ACFJAG_000092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003681544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HFC3979509.1"
                     /translation="MEATVYLEDNEYIALCDLLKLAGLAESGGQAKAFIAEGLVLRNG
                     GTEIRKTAKIRGGEVIEFDGARLEIADGYDPEA"
     gene            complement(44519..44755)
                     /locus_tag="ACFJAG_000093"
     CDS             complement(44519..44755)
                     /locus_tag="ACFJAG_000093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979510.1"
                     /translation="MPIAGVSGSPRLRMCISVNADSSGNRICSLPLGRISLDGWRHTG
                     FQTAFLRNRQCGHIAGFAAILGAAAAGATITPSF"
     gene            45040..48474
                     /gene="dnaE"
                     /locus_tag="ACFJAG_000094"
     CDS             45040..48474
                     /gene="dnaE"
                     /locus_tag="ACFJAG_000094"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HFC3979511.1"
                     /translation="MTEPTYIPLRLHTEFSITDGMVRIKKLIAKAQEYGLPALGISDL
                     MNEFGLVKFYKACRGAGIKPVGAADVWIGNPNAPDKPFRAMLVIRNDAGYLRLSELLT
                     EAYVGQDRNIHHAELNPEWLENGDNSGLICLSGAHYGEVGVNLLNGNEDAARAAALKY
                     AAWFPDTFYLELQRLPERPEWEACVSGSVKLAEELGLPVVATHPTQFMNRDDFNAHEA
                     RVCIAGGWVLTDKKRPRDFTPSQFFIPPETMLERFADLPEALENTVEIAKRCNLHITL
                     GKNFLPLFPTPDGLSLDDCLIKLSNEGLQERMVQLYPDEAERAAKMPEYQERLDFELN
                     IIIQMKFPGYFLIVQDFINWAKTHGCPVGPGRGSGAGSLVAYSLKITDLDPLKYALLF
                     ERFLNPERVSMPDFDVDFCQANRGRVIEYVREKYGAQAVSQIVTFGTMSSKAVIRDVG
                     RVLELPFMLCDKLSKLIPLEANKPLSLDDAMKAQPQIQELLEAEEADELITLAKKLED
                     LTRGLGMHAGGVLIAPGKISDYSPVYQADESASPVSMYDKGDVEDVGLVKFDFLGLRN
                     LTIIEMAQNNIKNTAGDIVDVGKIPLDDQTAYQIFRDANTTAVFQFESTGMKKMLKTA
                     HTTKFEELIAFVSLYRPGPMDNIPDFVARMKGQEFQYIHPLLEGILAPTYGIMVYQEQ
                     VMQAAQIIGGYSLGGADLLRRAMGKKKPEEMVKHREIFAEGAAKQGISREKSDEIFNY
                     MEKFAGYGFNKSHAAAYALISYQTAWLKAHYPAEFMAATMSSELDNTDQLKHFYDDCR
                     ANGIEFLPPDINESDYRFTPYPNMKIRYALGAIKGTGEAAVESIIAARQSGGKFTGLL
                     DFCERVGKEHMNRRTLEALIRGGAFDSIEPNRAMLLANIDLAMDNADQKAANANQGGL
                     FDMMEDAIEPVRLIDAPMWSESEKLAEEKTVIGFYLSGHPFGPYAQEVRQIAPTKLGR
                     LKPQDSVRLAGFVTAVRTMMGKRGKIAFVSLEDSSGQAEIMVGGQTLENCADCLKADQ
                     VLIIESKVSRDDYGGGDGLRIMANQVMTLQTARERYARSLSLALAPHHDIGGLVRLLA
                     AHQLPDTPRIPLQLSYANEKASGRLQVPPKWTVTPSSALFGELETLLGSRSVRVNW"
     gene            48516..48770
                     /locus_tag="ACFJAG_000095"
                     /pseudo
     CDS             48516..48770
                     /locus_tag="ACFJAG_000095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742773.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(49126..50056)
                     /locus_tag="ACFJAG_000096"
                     /pseudo
     CDS             complement(49126..50056)
                     /locus_tag="ACFJAG_000096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225663.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
     gene            complement(50126..50669)
                     /locus_tag="ACFJAG_000097"
                     /pseudo
     CDS             complement(50126..50669)
                     /locus_tag="ACFJAG_000097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467916.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
     gene            complement(50615..50830)
                     /locus_tag="ACFJAG_000098"
     CDS             complement(50615..50830)
                     /locus_tag="ACFJAG_000098"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979512.1"
                     /translation="MSVFRINMTAATVLAALSSPVFAAQTADLETVHIKGQRSYNAIA
                     TEKNGDYSSLKAAIWMTASIPASPPAA"
     gene            50990..51649
                     /locus_tag="ACFJAG_000099"
     CDS             50990..51649
                     /locus_tag="ACFJAG_000099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HFC3979513.1"
                     /translation="MTPPKLIIFDWDGTLADTTQPIIDTMRRSFAECGFPPPEAERVR
                     SLIGYSLPEIIRALLEMPSEAAVADIARTYSAHYLNPNNRNMTLFPDAPPCLDKLKAQ
                     GFRLAVATGKGRAGLDNAISQTATGGYWLATACAGEYPSKPSPEMVFGLCGELGLDPK
                     EALVVGDTAHDLHMAANAGAAAVGVATGAHSREQLLGAPHLAVLDGLSELPGFLARHY
                     A"
BASE COUNT        12405 a        15371 c        12961 g        10968 t
ORIGIN      
        1 ttttagttaa aaatttgtct ccaaacggaa aaaagcggtt tgttttttgt tgttaacatt
       61 tttattgtaa ttaaataaaa ggtcgtctga aaacggtttt cagacgacct tttgctataa
      121 tcgggcttca tcgccccgtt cggtttggaa ccttatgaaa accctcgtcc tcctcctgct
      181 ttccttctcc acgaccaccg ctttcgccgc atacggtttg ggtttggggc aggcaccgaa
      241 atatcctgcc ggctttcgcg cctacggtta tgtttattcc ggacggcagg gctgggtttt
      301 aaaaacagag gcggatgcca ttaaattaga cacgcttttc aaacgctttg tgtaccgtcc
      361 ttccgccgcc aatcaaaacc ccgtcggaca agccgtcgga cagcgttcgg acggcatacc
      421 cgccaaccac acaaaggaaa aaccatgagc aaaaaaatca aagccggcat tgtcggcgcg
      481 acgggctaca cgggcgtgga actgctgcgc ctgcttgccg cccatccaga tgtcgaagtc
      541 gccgccgtaa ccagccgcag cgaagcggga accgcagttg ccgattactt tccaagtctg
      601 cgcggcgtgt acggcctcgc cttccaaacg cccgacgagg caggtttgga acaatgcgac
      661 atcgtcttct tcgccacgcc caacggcatc gccatgaaag acgcaccgcg cctgattgaa
      721 cagggcgtgc gcgtcatcga cctttccgcc gacttccgca tacgggacat tccgacctgg
      781 gaacactggt acggcatgac ccacgccgcc cccggcctcg tttcccaagc cgtgtacgga
      841 ttgagcgaac tcaaccgcga agccgtcgca caggcgcgcc tcgtcgccaa ccccggctgc
      901 tacccgacct gcgtatccct gccgctcgtg ccgctgttgc ggcaatgccg tctgaagccc
      961 ggtatgccgc tgattgccga ctgcaaatcc ggcgtgtccg gcgcgggcag gaaaggcaat
     1021 gtcggttcgc tgttgtgcga agccggcgac aacttcaaag cctacggcac agccggacac
     1081 cgccacctgc ccgaaatcag gcagaccatc gccgggcttc aggacggcat cgccgaagga
     1141 ttcgtgttca cgccgcacct cgcgccgatg atacgcggta tgcacgccac cgtttacctc
     1201 cacctttcag acggcagcga ccccgaaacc gtcctgcgcg actactaccg cgacagcccg
     1261 ttcatggaca tcctgcccgc cggttcgaca cccgaaaccc gcagcgtgcg cggcgcaaac
     1321 ctctgccgca tcagcatccg tcaggcggcg caatccgatg tgtgggtcgt cctttccgtc
     1381 atcgacaacc tcgtcaaagg cgcggcggga caggcggtgc aaaatatgaa cattatgttc
     1441 ggactggagg aaacacacgg cttgggcggc atccccctgc tcccctgaag cgcaaacggc
     1501 aaaccgcagg catcgtgcct gcggtttttt gatgccgtct gaaagcggcg gtttttttgg
     1561 gttcggacgg cttttggctc atcattccgc gaaaacaaaa atctaaaata ccgtcattcc
     1621 cgcaaaagcg ggaatctagt ttatccggct tcagcaattt ccgacacatt tccacacgct
     1681 tcgattccgt catttctccg gtttcaatcg tttccgataa caccgtggtt tttcatttct
     1741 agattcccgc ctgcgcggga atgacggcgg ggggcttgcc gttttcccga taagcctctg
     1801 cggattctca ttgccggatt tccgcccact tgggaataac gggatttaaa atcatgaaaa
     1861 tgtgtcaaaa ataatatagt ggattaacaa aaaccggtac ggcgttgccc cgccttagct
     1921 caaagagaac gattctctaa ggtgctgaag caccaagtga atcggctccg tactatttgt
     1981 actgcctgcg gcttcgccgc cttgtcctga tttttgttaa tccactataa aaaatcagat
     2041 ttccgttaca cttttttcta atatttcaga cggcattttg ctcacacacc caaataacct
     2101 tccctgccgg aaagccacct tgccaaatgc gcttcgacga tttcagggtt ttgttcaatc
     2161 agcatcgggg cggtttcgcg cgcttgttcc aaaaggtgta agtcttcttc gagcttggcg
     2221 aagcgcagca taggcacgcc gctttggcgc gcgccgagaa attcgccggg gccgcggatg
     2281 ttgaggtctt ggcgggcgat ttcgaagccg tcggtgtgtt cgtagatgac tttcagccgc
     2341 gctttggcga gttcgcccaa gggttcggca aacaggagga cgcacacgct ttcccccgcg
     2401 ccgcgcccta cccgtccgcg taattggtga agctgcgcca agcccatgcg ctcggcgtgt
     2461 tcgatcacca tcagggcggc gttgggcaca tctacgccga cttcgatgac ggtggtggca
     2521 accaagacgt tcagacggcc tgcggcaaat tccgccatga cttcggcctt ttcggcggcc
     2581 ttcatgcgcc cgtgtaccag tccgatattg ggttcgggca atgccgtctg aagccgggcg
     2641 agggtttcgg cggcggtttg cagttgcagg gtttcgcttt cttcaatcaa tgggcagacc
     2701 caatatgcct gccgcccttt tcggcaagtg ccgaggacga agccttcgac ttcggcgcgg
     2761 cggacgttgt tgacgaggcg cgttttaatc ggcgtgcgcc cgggcggcaa ttcgtcgatg
     2821 acggatacgt ccaagtcagc gaagaagctc atggcgagcg tgcgcgggat gggtgtggcg
     2881 gacatcatca gctgatggac ttcgcgccct ttgtttttga gtgcgaggcg ttgtgcaacg
     2941 ccgaaacggt gctgttcgtc cacaatgctc aagcccaaat tgtgaaacgc cacgccgtct
     3001 gaaaacaggg cgtgcgtgcc gacggcgatt ttgacgctgc cgtcggcgag tttggctttg
     3061 gcttcgtctt tggctttttt gcgcaaactg ccaaaaaggc agacaacttc aatgcccaaa
     3121 ggttcgagcc attgtttgaa cttgatgaag tgctgttcgg caaggatttc agtgggcgcc
     3181 attacagcca cttgcgcgcc tgattcgatg gcggtcagcg cggataaggc ggcgacgatg
     3241 gttttgccgc tgccgacatc gccttgcagc aggcggtgca tggggtgggt ttgcgccata
     3301 tcgcggcaga tttcggaaac aactttttct tgtgcatcgg tcagggcaaa cggcagggct
     3361 tggcgcaggg cttgggtcaa tgtgccgtcg ccgcgcaatg ccgccgccgt gccgctgacg
     3421 cgcttctgcc gcgccaaacg catggacaac tgttgcgcca aaagttcgtc gaatttgagc
     3481 cgctgccacg ccggcagcgt gccgtctgaa agttgatgaa tagtgaaact cggcggcggc
     3541 gaatgcaaaa ggcgcaggct ttcggcaagg cgcggcagct tcagacggcc taataaagca
     3601 tcaggcaagg tgtcgtgcag cggcgtaacg tccaacgccg tctgaatgat gcggcgcaaa
     3661 gtgggctggt tcaaaccgtt tacggtcggg taaaccggcg tgaggctttc cgccaaaccg
     3721 ccgccctcgg catcgcggat tttgggatga atcatctcgt cgccgtaaaa tccgtgtttg
     3781 atttcgccca cggcgcggat gcgtttgccg accgccgtct gcttctgatg gctggcgtaa
     3841 aagtggatga agcgcagaaa aaggacgctg ccggaaccgt cggcaatttg gacaatcagc
     3901 tgcttgcgcg gtttgaacgt tacttcctga tggataacct cgccctcgac ctggcacggc
     3961 acgccgatcg gcgcgtcctt aatcggcata atgtgcgtct cgtcctcgta acgcagcggc
     4021 aggtgcaaca ccaaatccca cgcggtatgg aggttgagtt tgtcgagctt cttggcggaa
     4081 acatcggtga ttttgagctg tttctgggtt tcgggcgaca tcataggcag attcctttgg
     4141 acgcgcctat tttatccgaa aacaaaaatg ccgtctgaaa cggattcaga cggcatcgac
     4201 aggcaggaat caagccccgg cggcttcggc ttcctgctgt tgttggtaaa tcgcttcaaa
     4261 attaatcggc gcaagcagga cgggcgggaa gccggcgcgc gttaccgtac cggaaacagc
     4321 ttcgcgcgcg taagggaaga ggatgttcgg acacgccacg cccaacagca gctgcacatc
     4381 ttcttcgggg atgttttcca gacggaaaat accgctttgg gttacttcgt tcaaaaacat
     4441 cgtgcgctcg ttatccaatt tggcggtaac ggttacggta acgtccacgt cgtagtagcc
     4501 gtcttccagc ttttggctgc cggtggaaac gcgcatatcc acttcgggat cgccctgttc
     4561 caaaaagatt tgcggcgcgt gcggcacttc caaagacaag tctttgacat acagtcgctc
     4621 gatgctgaat acgggttgca gttcttcgct cattttgttt tcctagttgt gggttaaggg
     4681 ttcagcagtc cgtccagccc gccttcctgc tgaaggcggt agaggtcggt aaatcctccg
     4741 acgtgcgttt cgccgatgaa aatctgcggc acgctgcgct gtcccgaaag ccgctgcatt
     4801 tcggcaaagg cttcggggct tgcatcgaca cggatttcgt cgatatgtcc gacacctgcc
     4861 gcgtgcagca gccttttcgc catcgcgcag taggggcaaa acggacctgt gtacatggta
     4921 acggtctgca tattgggttt ccgaaagttt tgcaatgata atcaatatag gggcaatcgc
     4981 tccgtttggc aagtgcggaa cagatgcacg ttcagacggc atgtgcggag tgtgtcaaag
     5041 tttctttttt aaagtatgat aggcattgtg aaaaatattt ttgcacccgc tctgcgcggc
     5101 ggggcggaac ggatgcaaaa atatttttat tacattttca ggaaaaacca tgttgtcagg
     5161 actccccatc cccaaagaca tcgcgcgccc gcccgaaacg atattggtca acatcacgcc
     5221 gcaggaaacg cgcgtggcgg tgttggagga aaacaatatc tgcgagctgc acatcgagcg
     5281 caacagcggg cacagcctgg tcggcaatat ctatctgggc gtggtgcgcc gcgtgctgcc
     5341 cgggatgcag agcgcgttta tcgacatcgg cttggaacgc gcggcgtttt tacacatcgt
     5401 cgatgtcctc gaacaacgcc gcaaccccga agaaacccag cgcatcgaac atatgctgtt
     5461 tgaagggcag tcggttttgg tgcaggtcat caaagacccg atcaacacca aaggcgcgcg
     5521 gctttccacc caaatctcgc tggcggggcg tttcctcgtc caccttccgc aagaagacca
     5581 catcggcgtg tcccaacgca tcgaagacga tgccgaacgc agcagcctgc gcgaacgcct
     5641 cgacaagctc ctgccggaaa atgcctgccg gggctacatc atccgcacca acgccgaaaa
     5701 cgccaccgac gaacagctcc agtccgacat cgactacctg accaaagtgt gggaacacat
     5761 ccaagaacag gcgaaaatcc ggccgccgga aaccctgctt tatcaggatt tgcctttaag
     5821 cctgcgcgtg ttgcgcgata tggtcggctg cgacacgcag aaaatcctcg tcgattccac
     5881 cgtaaaccac gggcgcatga cgcgttttgc cgaacaatac gtccacggcg cattgggcag
     5941 gatagaattg ttcaaaggcg aacgcccgct gtttgaaacc cacaacatcg aacaggaaat
     6001 cagccgcgcc ctgcaaccgc gcgtcaacct caacttcggc agctacctga ttatcgagtc
     6061 caccgaagcc atgaccacca tcgatgtcaa caccggcggc ttcgtcggcg cgcgcaattt
     6121 cgacgaaacc atcttccgca ccaacctcga agcctgccac accatcgccc gcgaattaag
     6181 gctgcgcaac cttggcggca tcatcatcat cgacttcatc gatatggcgc aggaaagcca
     6241 ccgcgaagcc gtgttgcagg agcttgccaa agccctcgcc ttcgaccgta cccgcgttac
     6301 cctgcacggt tttaccagcc tggggctggt cgagctgacg cgcaaacgct cgcgcgaaaa
     6361 cttaaaccaa gtcctctgcg aaccctgccc ttcctgccaa ggcaggggcc gcctgaaaac
     6421 gccgcaaacc gtgtgctacg aaatccagcg cgaaatcgtc cgcgaagcgc gccgttacga
     6481 tgccgaaagt ttccgcatcc tcgccgcccc caacgtcatc gatttgtttt tggacgaaga
     6541 atcgcaatcc ttggcaatgc tgatagattt catcggcaaa ccgatttctt tggcggtcga
     6601 aaccgcttac acgcaggaac agtacgatat tgtgctgatg taaaaaatgc cgtctgaagc
     6661 cttcagacgg catctgtcta tttcagggtt tccttgtcca acagcgcgcg tatcaacagc
     6721 ccgtgtccga aacgtcggct gtcggtcagt tccaaatatc cgccgtattt tttggccagc
     6781 gtgtcggcaa tcgacagccc cagccccgcc ccctgctgct ccgttcccaa aatacggtaa
     6841 aacggatcga ggacgcgggc gcattcggat tcgggaatgc cgttcccgtt atcctccacc
     6901 cacacggcga gatatttccc ttcgtccgtg aaacccaaat ctatcctgcc ctcgggcggc
     6961 gtgtaacata ccgcgttgtc ggcaaaggtt ttaaccagcg tatagatttc cgtttcgtcg
     7021 gcagacactt cgacatcgcc tccgaccgcc acaccgatgt cctgacgttt ttccaaagcc
     7081 agcggcatca gttcctgcaa cacttggcgg aaacggcttt gcagcccgaa tgtcgttttc
     7141 gtcaaagggg tttcgtccga ctgcgaacgc gccagtgcca aaagctgttc gagcaggtgt
     7201 ttgttgcgcc tgatgctctg ctgcaaaacg gcggactgcc gccccgcatc gggtgggagc
     7261 ggcatattgt tgagccgttc cgcctgaagg gaaagggcag tcatcggcgt acgcaattcg
     7321 tgtgccgcgt cggcgacaaa ccgctgacgg cggcgtatat cttcatcaac acgtttcaaa
     7381 agcagattga tgccggttac gaaccctctg attttactgg gaatattgta cacactcaaa
     7441 gcagacaggc cgttgattcg gcgttgttcg agactttgcg acaatttgcg gacggggcgc
     7501 atggctttgt gcgtaatcca cacagtcagc agtatcatca gcggcagtgc cgccaacagg
     7561 ggcaacacgc tttgccgtgc cgcatccgcc gccaaatctt cacggtattc gttttcctgc
     7621 atgacggcaa tccgtccctg ttcggtcgtg cggatatagg cgcggtaata atcgtcgtcc
     7681 ccgtccgccc gaagcgtgtg cagaccgtcc gccagatgcg cgggcaggct gacaacaggg
     7741 tcttcctgcc gcggcatctg cacgaaaatg cgcgtatcgc cgtcgccctc gggcaaagtt
     7801 tcgggcctgg aatcggggcc gacatacaat gccgcctgac ggagcaggtc gtcctgcaac
     7861 gcttccgttt cgtggaaggt ttcgtagtag gaaaacatac ctgcaagcat tgccagcgga
     7921 acaaacatcc aaatcagggc aaggctgatt ctgacctgaa gcgaatgttt taaaatttta
     7981 aaaaaacggt ccggcatctt cgttcctgtt cagacggcat cttgacgcgg catcagccag
     8041 ccgacaccgc gcacattttg tatgctttcc ttacccaatt tcttgcacag cccgtgaatc
     8101 agaaaatcca ccgcattgct ttcgacttcc ccgccccaac cgtaaacctt gtcctccgaa
     8161 tccgagcgcg acaaaatcac acccggcctc gccagcaaag cctgcaatac cgaaaactcc
     8221 tggttgctca atgccacctg cctcccctcg gcaataattt ctacctgata cgttgcagga
     8281 ttgagggata acgcaccatt tgacagacac gcctgcgcct gtccgctccc gcgccgcaac
     8341 accgcccgca tccgcgcctt aaactccgcc atatcgaacg gcttgacgat atagtcatcc
     8401 gcaccgccgt ccaaaccgtt cagccggctg tacaaatcat cccgcgccgt aacgatcagc
     8461 acggggacgg tacagcctgc cgcgcgtatt tccgacaaaa catccaaacc gtcccgccca
     8521 ggcaaaccca aatccagcag cagcatcaag tcataaggct gggcagcggc agccgccgca
     8581 acctgcgcgc cgtttttgac ccaatccacc gcatagccgc cgtctttcaa acttgccgac
     8641 accgcttccg caatcatcgc atcgtcttcc accagcaaaa cacgcatcaa ctttcccttc
     8701 aaaataaacc gtgcctattc taacacccca aaattagccg caatttagcg gcctttacgc
     8761 ttgccggtat ttttcaaaac tgcggcacaa aaaaaccgcg ccggcaactg ccttcagacg
     8821 gcattggggc gcgattgcaa catacggaca ggcaggcaaa gcctgcgaca gatcacagga
     8881 acgattcggg cttcaggcgg cttcgccgtt tacggcagag gcacgattcc tgccgctatc
     8941 gaactgatca atatcgccag cgacaaaccc cacgcccaga aaaacgaata acggatgtgt
     9001 ttgcccatcg acaatttcgc caaacccaaa cccatccaca aagccggcga aagcggcgta
     9061 acaaaagtac cgacgatact gccgatcaac atcgcatagc ctgccgcttc gggtgcaacg
     9121 cccgcctgcg aggtaatctg ttccacaatc ggaaacagtc cgaaataata agcgtccgta
     9181 ctcaaaacca actcaagcgg aatacccaac acaccgatgg caatatgcag ataaggcagc
     9241 agcgcgtccg gcaggatatg cacaaggtct ttggaaatcg cgtccaacat ccccgcgccc
     9301 ttcaaaatcc ccaaaaacgt acctgccgcc aaaataatgg acgccatcat caccgcgccg
     9361 ccggcgtggg cataaatccg ctccatctgt tcctgcgggc tgcggtaatt caaaagcaac
     9421 gccgccgttg cagccagcat aaatacataa cccggcggga agatgcccga aaaaagcagg
     9481 ctcatcgccg ccaaaaacag caggacattc caccaaaaca gtttcggacg cgccaatttt
     9541 tgttcttctt ccgacaaagg cgccggcttt atcaaatccg ccacggcggg caacgcgccc
     9601 aactcccgga caatccgcct tttttcacgc acacccaaaa acagggacag cacaaggata
     9661 aacaccacac cgataatttg caccgtcaac aaaggtttat acaattcgcc cacatctgcg
     9721 cccaacacgc ttgcaacccg cccgatcggc ccgccccgcg gcaaaaggtt gattagcccc
     9781 gcgctggaag tcagcagcaa aaacagcagg taaggattca tatgcagacg cttgtaaagc
     9841 ggcaaaaggg cggggacgac cgataaaaac gtcgtcgcgc ccgccccgtc caactgtgcc
     9901 accaccgaca ccaagaccgt ccccacactc actgccacga tattaccccg agtcagctta
     9961 atcaaaccgc ctatcatcgg acggaacagc cccacatcgt tcatgattcc aaaaaacaaa
    10021 atggaaaaca taaacataat cacaatctgc gtcaccgatt tcgtgccgcc cgaataaaat
    10081 tcttttaatt gggatacatc aaaccccgcc agcaacgccc caatcagcgg caccaagatt
    10141 aatgcgatga tgggcgacac tttttccgtc agcaacagcc atacgatgac cccgataatc
    10201 agcaatccga taaacgtcag cattatttct cctttatttt attttgaaca taaaaccgcc
    10261 cgtgcaggca aaaccgccaa catatgcggg ataagccttg cattccattc acgcctgccg
    10321 acatttctgc atccgtccgt catttcacgg cggcaaccga tacggaacaa ccggcaaacc
    10381 ggtatcggga cggcgcgggg gcatccgtcc cggtgcaccg attcaaacga aactgccccc
    10441 tatcattgcg gagcgcgggg cgtgccgtac acgcgggatt ttaaacacgc cgatcatttg
    10501 ccgcgcatta tccggcaaac ggcaaacctt gacgctgccc ggcccatata aaaaagccgc
    10561 aaaacccgaa ccggttttgc ggcttttcga tttggtttgt ttatttggca tttctttcaa
    10621 tcaaaccgac aaactgattg atatatgact gaacaaaatc ccttgccgag tcaatcaact
    10681 taccgttttc atcaaacagc gtcggcgaat tgcccaaaaa tacttccggc tgtccggtta
    10741 cgggcatatc aaaatacgac agggcaaggc gcaggttttt ttgggaactg taaccgccca
    10801 tcttgccgac ggaatggctg atgatgccgg ccggtttgtt tttccaagcc acgtcggcat
    10861 tcggtttcga gccgatgtcc accgcatttt tcaaacaggc gggaatggtg cggttgtttt
    10921 cggacgtaac gaacaaaatg ccgtccgaag ccttaatcgt ttcgcggaaa gccgtgtagc
    10981 tttcgggcag cggcacatct tccaccgcag ggtcgtcata atcgaaattg taaagcggca
    11041 gatgtccgat ttcgacgatt tccgcctgcc agccttcggg gaacatctcc gccgcattca
    11101 atgccacttt gcgcgcaaac gaagcacggc gcaggctgcc caccaaaata ctgattttct
    11161 tagccacaat cattcctcct gaatattaag tttgtgcgtt tcaatcattt cataatggta
    11221 acgattatta tatatgtgat ttcccctgca aacaagccgg tccgccgccc cggcgttccc
    11281 acttatccgg ctttgcctta taattgcttt ttttatgtaa cagattcacc tatgaatttc
    11341 cccaaaacag cggcctccct gctgctgctt ctcgcctccc tcgccgcaca cgcgctcgat
    11401 accggccgca ttccgcaaaa cgaaatcgct gtatatgtcc aagagcttga cagcggaaaa
    11461 gtcatcattg accaccgtgc cggcataccc gtcaatcccg cgtccacgat gaagctcgtt
    11521 accgcgtttg ccgccttcaa aaccttcggc agcaattacc gctgggcgac cgagtttaaa
    11581 agcaacggta cggtaaacga cggcacgctt gacggaaacc tgtattgggc gggcagcggc
    11641 gaccccgttt tcaatcagga aaacctgctt gccgtccaac gccagttgcg cgacaaaggc
    11701 atccgcaata tcacggggcg cctgatgctc gaccacagcc tgtggggcga agtcggcagt
    11761 cccgaccatt ttgaagccga cagcggttcg ccgtttatga cgcccccaaa tccgactatg
    11821 ctgtctgccg gtatggttat ggtgcgcgcc gaacgcaatg ccgccggcag taccgacatc
    11881 ctcaccgatc cgcctttgcc gcatattttt gcccaaaaca acttgaaaat taccgcctcc
    11941 caagctgcct gcccttcggt caaaaaactg atgcgcgcat ctttttcggg caatacgctg
    12001 aaattgcgcg gcaatattcc cgaaagctgt ttgggcaagc ctgtcggtgt ccggatgttc
    12061 gcgcttgacg aactgatccg ccaaagtttt accaaccgct ggctgctcgg cggcggacgg
    12121 atttcagacg gcatcggcat agccgacaca ccggaaggcg cgcagacgct tgccgttgca
    12181 cacgccaaac cgatgaagga aattttgacg gacatgaaca agcgttcgga caatctgatt
    12241 gcgcgttccg tcttcctcaa actcggcggc gacggcaaac tgcccgccgt ttccgaacag
    12301 gcggcgtctg ccgtccggcg agaacttgcc gtatcgggca tcgatgttgc ggatttggtt
    12361 ttggaaaacg gttcgggtct gtccagaaaa gaaagggtaa cggcgagaat gatggcgcaa
    12421 atgttggaaa cggcttattt cagcccgttt gcacaagatt tcatcgacac gctgcccatc
    12481 gccggcacag acgggacttt acgcaaccgc ttcaaacaaa gcggcgggct gttgcgctta
    12541 aaaaccggca cgctcaacaa tgtccgcgcc cttgcaggtt attggctggg cgacaaaccg
    12601 atggcggtgg tcgtcatcat caacagcggc cgcgccgttt ccctgctgcc cgacttggac
    12661 aacttcgttg ccaaaaacat catctccggc ggcgacggct ggctggatgc gaaactgatg
    12721 tgcaaagaac gccgcgcctg aatcgggaaa atataaaaat gccgtctgaa ctgttcggac
    12781 ggcatttttg attttcaaac cggaattaca gccccgctgc cgctttcaat gaggccgctt
    12841 tgtcggtgcg ctcccaagta aactcgggtt cttcgcggcc gaaatgtccg taggcggcag
    12901 attttccgta aatcgggcgc aagaggtcga gcatttggac gatgcctttg ggacgcaggt
    12961 cgaaatgttc gcaaaccagc gcaatcagtt tttcctcgct gattttaccc gtaccgaaag
    13021 tatcgatgga aatcgaagtc ggttcggcaa cgccgatggc gtaggaaact tggatttggc
    13081 attgggttgc caagcctgcg gcgacgatgt ttttcgccac ataacggcag gcgtaagcgg
    13141 cggaacggtc cactttggac gggtctttgc cggagaatgc gccgccgccg tgcggagccg
    13201 cgccgccgta ggtatcgaca atgattttgc ggccggtcaa accgcagtcg ccttgcgggc
    13261 cgccgatgac gaagcggccg gtcgggttga tcaggtattt tgtttcgtcg gtcagcagtt
    13321 cgggcggcaa aacgggcttg ataatctgct caatcacggc tttactcagt tcttcatggc
    13381 tgatggcagg atcgtgctgg gtggacagga cgacggtatc aatgcgtttc accttgccgg
    13441 tttcgctgtc gtaaaccacg gtcagttggg cttttgcgtc agggcgcagc caaggcaggc
    13501 ggccgtcttt gcgcaattcg ctttgacgct gcatcaggcg gtggctgtaa tagatggcaa
    13561 acggcatcag ggtcggggtt tcgtcgcagg cgtagccgaa catcaagcct tggtcgcccg
    13621 cgccttggtt caggtcgatg ccttcgcctt cgttcacgcc ttgggcgatg tcgggggatt
    13681 gttggtcgta gtacacgccg accgcgcagc cgttggcgtc aaagcccagc tcggaggagt
    13741 tgtagccgat gcgtttgatg gtttcgcgtg cgactttgat gtagtccact tgggcggtgg
    13801 tggtgatttc gcccgccaat acgcacaagc ctgtgttgac caaagtttcc gccgcgacac
    13861 gcgctttggg gtcttgcgcc aagatggcat ccaaaatcgc atcggatact tggtcggcta
    13921 ctttgtccgg atggccttcg gaaaccgatt cggaagtaaa cagatattcg ctcattgaaa
    13981 ttttccttga aaaacaaacc atcttcttca gacagcatgt tgtatgaaca taatgtcgac
    14041 agcgggaaat atagcaaaat ttccctattc gtgccattca gttgagaaat attcctattt
    14101 aaacggcgct ttggaatctc tgtccgtacg tttcgtacag gcaaaaaaat tcccgcatca
    14161 agcgggtttg gattgctccg gcgagccaca tcggtttttc aaccgtccac cttacctttc
    14221 cgtttgaaaa gcaggttggc atggaattcc caactcttaa tgcagcgcgc atcgtagcag
    14281 aaaaggcata ttgccgcaat acttcccttt ttcagacggc atgtttcgtt tacaattcag
    14341 gctgtttccc cctttgcgaa ccgccatgca catcctgttg accgccctgc tcaaatgcct
    14401 ctccctgctg tcgctttcct gtctgcacac gctgggaaac cggctcggac atctggcgtt
    14461 ttacctttta aaggaagacc gcgcgcgcat cgtcgccaat atgcggcagg cgggtttgaa
    14521 ccccgacacg cagacggtca aagccgtttt tgcggaaacg gcaaaatgcg gtttggaact
    14581 tgcccccgcg tttttcaaaa aaccggaaga catcgaaaca atgttcaaag cggtacacgg
    14641 ctgggaacac gtgcagcagg ctttggacaa gggcgaaggg ctgctgttca tcacgccgca
    14701 catcggcagc tacgatttgg gcggacgcta catcagccag cagcttccgt tccacctgac
    14761 cgccatgtac aagccgccga aaatcaaagc gatagacaaa atcatgcagg cgggcagggt
    14821 gcgcggcaaa ggcaaaaccg cgcccaccgg catacaaggg gtcaaacaaa tcatcaaggc
    14881 cctgcgcgcg ggcgaggcaa ccatcatcct gcccgaccac gtcccttctc cgcaggaagg
    14941 cggcggcgtg tgggcggatt ttttcggcaa acctgcatac accatgacac tggcggcaaa
    15001 attggcacac gtcaaaggcg tgaaaaccct gtttttctgc tgcgaacgcc tgcccgacgg
    15061 acaaggcttc gtgttgcaca tccgccccgt ccaaggggaa ttgaacggca acaaagccca
    15121 cgatgccgcc gtgttcaacc gcaataccga atattggata cgccgttttc cgacgcagta
    15181 tctgtttatg tacaaccgct ataaaacgcc gtaacgaaaa taaaaatgcc gtctgaacag
    15241 gtttcagacg gcatcttgtc atttgacgat ttcggacaac gaccaacgcg gacggacgtt
    15301 gaacgcaccg acctccctgc ccttgcccag gtgcatcgca ccggcaaagg caatcatggc
    15361 accgttgtcc gtgcagtatg ccatcggcgg gaaaaacacg ctgacttttt cggacggatg
    15421 tttcggcttg cctttggggg tcgggatttg taccgtcatg ttgccgaaag tttcacggag
    15481 tttgcggttt gcaccgaccc cgccggcgac cactacggtt ctgaaccctg tctgcaacag
    15541 ggcttttttc acttttgcct ccaacacttc tactaccgca tcttgaaacg cacggcaaat
    15601 attgttgcgg gtttgctcgg gtatggtttc cgaaccgttt gcctcacgca ctttttcaac
    15661 ggcagtcaaa acagcggttt tcaatcccga aaaactcatc tgcaaatcgt cggaatgaat
    15721 catcgggcgc ggaaaaacaa acgcttcggg cctgcccgat tccgcaagtt ccgacagttt
    15781 cgcaccgccc ggatacggca aacccagcag tttcgccgtt ttgtcgaatg cctcgcccgc
    15841 cgcatcatcg acgctctcgc ccaaaagctc gtaatcgcct atgcccctga ccgccataat
    15901 ctgcgtatgc ccgcccgaaa ccaacagcgc gacaaaagga aagtcgggtt tttcctccgc
    15961 caacagcggc gacagcagat gtccttccaa atgatggacg gggatgacgg gcttatccaa
    16021 cgctaaagcc agcgcgttgg cgtagctcga acccgccagc agcgcaccgc ccaaaccggg
    16081 cccctgcgta aaggcaaccg cgtcaatatc gccatacgat gcgcctgcct gcgccaaaca
    16141 gccttcagtc aacggaacaa ggcggcggat atggtcgcgg ctcgccaatt ccggcacgac
    16201 cccgccgtat tccgcgtgca ttgccatttg agtgtgcagg cagtgcgacc gcaatcctcg
    16261 ttcggtgtcg tacagcgcaa cgccggtttc gtcgcaagaa gattcgattc ctaataccaa
    16321 catggtctga tgccgttaaa aactgaaaaa cgtattctag cgaatttcgg cacgactgcc
    16381 gtatccccaa aacggaacat gccgtctgaa gcccttcaga cggcatcgtc gcaccgtatc
    16441 aaagcgttcc gtaagaatgc agcccgctca aaaacatatt cacgccgata aaggcgaatg
    16501 cggttacgaa caaaccgata atcgcccacc acgccagcac tttgccgcgc cagcccgcca
    16561 ccagccgcaa atgcagccac acggcgtaat tcaaccaaac gatgaacgcc caagtctctt
    16621 tcggatccca gctccaatag cgtccccaag cgtccgccgc ccacaacgcg cccaaaacgg
    16681 tggcaatggt aaagaacaaa aagccgacgg caatcgcctt atacatcacc tcgtcgatca
    16741 atgccgacgg cggcagccac agttttccgc ctttttcttc cgcacgcagg gaaaccagtt
    16801 cggcaatacc gagcatcgcg gaaatgcaga acgcgccgta accgataaag tttgccggaa
    16861 cgtggatttt catccaccag gactggagcg cgggaatcag cggctggatg gtatgcgcct
    16921 cacgcgacac gctgtaccac aacacaaagc cgaccacgac cgccataaag ccgaacacga
    16981 agccgcccaa tttctgcacg gcaaatttac cctcgtaata caaatacatc agcgcggtaa
    17041 tgaccaaaaa cagaatgaac acttcataaa ggttggacac ggggatatgc cctgcatcgg
    17101 gacggagcag atagctttcg tgccaacgta ccagcagacc ggtaaagcct gctacggcag
    17161 acacccatgc aaaggcggta cccatattca aaagcgtgtt ggtcggcaca tttttcacgc
    17221 ttgccaaaac cgcgcccgaa atataggcga acagggcgaa gaagacaaaa gcacactgcc
    17281 acatgatcgc cgattggctg ctgaggaaat accgcaacag gaaaatctct gccgatttaa
    17341 tgttgccgcc atacagaccg acggcggcat aggcaagcaa tacgcttaaa ggaacaaacc
    17401 agcgcatcgg tttgaaaaac caacccaaaa acacggcaat accggcactc gcccacaaca
    17461 tgaccgtttc gtaaatgtcc atatgcatac cggaacgggt ctgcacgaaa accgtagccg
    17521 caaaaaccag cacggcaaat acccaatccc aaagattcag attgcggatc aaagatttct
    17581 gaatcagcag ctcgtgttcc ggaagggttt tatagtgttc agtcatgatt caagtccttg
    17641 ccgagccgtt gcaggctctc gacgtgtttt ggaaattcct tctgcaaatc ccgttcgctg
    17701 cgggccgaag acatagcaaa acggattttg ccgtctgaaa acaataccca cgcccgtttt
    17761 tcgcgcacat aaaacataaa taccgtaccc aaaaccaaca ataccgagcc gagatagacc
    17821 aaaagcgcac ccggcgaacg ggtcatctgc aaacctgagg aacgcacctc ggaaaacccg
    17881 tcaagctgga gcagcatagg cgcgggatat tccgtcagcc ccgtataggc atccatactg
    17941 tgcagcagga aacggttccg cgcttcatcc tgccgccatt cgggcaagcc gtaccggcgt
    18001 atggtttcat ccaaagcagc gttcatcacg ccgtaaagca tttcgtagaa atagccctgc
    18061 atcttatcct gctgcccttt cgggatattg gacgtaataa attcgtccaa tcccaaatag
    18121 cctttttgcg caaagatgtt cagcgtgttt tccgcagcca gcatgaattg ttcgcggatt
    18181 tcggcaggtg cgtctttggt tgcgtcggca accagacgtt tgcgcccttc cccatctttc
    18241 aaaaactcac gcaatgccat aaaggtgtcc gctttcaact gcttgtccaa ggggatacgc
    18301 agccagcggt attgctgctg caagccgctg cgcgtgccgg tcagccaaaa ataatctttg
    18361 tcctgcaaaa tcggcagcat atagttttta tattcgaccg cctgccctgc cgcatcacgg
    18421 atgcggtaca cgatggaagg gccgatattg gtgtattttt taccttcctg agtaacggcg
    18481 cggacatcgt tcagagtgga tttcaggctt ttttcccgtt ccgcaccctc gctcatgtcc
    18541 tccacattca tagaagtgaa ctgatcgaac tcaagacgat atttgtgttt gccgatttcc
    18601 aacggaaact ggtgtatgga ggttgccttc aacacgacag gttcgcgcga agcatccctc
    18661 aaattccacg ccttgaatgt caaatccgaa ccgccgtcgg caaaactcgc ctgataaatc
    18721 gtgatgccgt gcaaggtcaa aggatggttc acgcggatgg tgcgctcgag tttctcaccg
    18781 gttcccttgt ccgttacttc aatatcgctg gcaaaatcgc gcggcatacc cgtattgtaa
    18841 aaatcgatat ggaatttttt cagtttgact tcaaaaggca agtcctgaac caacatcccg
    18901 ttgtcggcat tcaggaaaac cacatccgca ctttgcccct cggaaatatt gacgttgccc
    18961 ctaaatgaga gattggacgc acccaaaata ctttcgggct tgaaatcctt ggcataaacc
    19021 gcctgattgt ccggaacaat ccgaccggcc agcataccca gcttcagcag caggttactg
    19081 tctatcaacc cgcccaggca aatgacaatc aaagcaacat gggcaaagat atagccccat
    19141 ttgttcatcg tgcctttttt ggcggcaatc agaaccgacc cgtcctcacg gctgacggtt
    19201 tttccctgaa aaccccgcac ctccagataa cgtttggcaa cttcgggggc aatttttaca
    19261 tccaacagcg aagaatggcg catcgccgcc agagattttt ctttaacctt ttcccggaaa
    19321 gacttcattt cgcgccaaaa cggcggaacg ttacggatta aacacaaact ggtagaaacc
    19381 accagaaaca tcatgataac gacaaaccat gccgaagcat agacatcgta caaacccaaa
    19441 aaatcaaaaa tccgagtcca aaacggtccg aatttgacca aataatccgt ctgcggctgg
    19501 ttttgctgta acaccgtgcc gataaccgat gcaataccca gcagactgag caaagcgacc
    19561 gcaaagcgca tggagctgaa aaaagcgaac cacggacggg aaagaagtgt gggggatata
    19621 cgggatttac tcattgtgtg tttattccgc catcaggaat atgggaaagc agaattgggc
    19681 agacagaaaa caacgtcccg attctactgt cttgatgctt tttatttcaa gacaatgaag
    19741 acagcctgca tcgattccaa cggttgcgat tgaaaaaact tatcgcaaaa ttttcagaag
    19801 ccgtctgaaa accttttcag acggcttctg aagcagaccc ttggatgatt aacgcaaacc
    19861 ctggataaag ttagcaactg cttttaaatc ttcttcggac atacggtttg caatatcttc
    19921 catgatggta tttttacgct gaccggactt gtaggcattc atctgttcaa caatatatgc
    19981 ctggtgctgg ccgcccaaac gcggataagc ctgaatttcg cttccgcctc ccggcatacc
    20041 cgcaccgctc ggaccgtggc aggacataca cgccggcact tttttatcgc tcaaaccgcc
    20101 gcgatagatt ttcgcgccca attcgggatt ttccttagga ttggcttcgc cggatttggg
    20161 ctgctgtttg gcatagaatg cggatacgtt caaaatatcc tgatcgctca aattcattac
    20221 caccggtttc atcacagctg ccgaaccgtg ggtgcgtttg ccgtcgcgga tgccgatagt
    20281 ttgatgatag atgtaagcag tatgctgtgc cgccaaacgc ggatacatcg caatgccgct
    20341 gttaccgtct gctgcatggc aagccgcaca aaccgttgcg gcaacctgtt tgcctttttc
    20401 cacgtctgct ttgggagatg cggaaaccgc accggcagcc aaaacaaagg ccaataaagt
    20461 caatcgtctc atggagtgct cctgattaca gcattggata acgcaacaat gctctttttt
    20521 atattcaaat atgggatttt tgacccgatt aaaaccgatg attctgtaaa cgtgttattc
    20581 tatactaaat ttacattaaa ttaccactgt gtttcacata aaaccaaccg catatttttg
    20641 ctgtcggaca aacggcggcg gaaaacaagg atatgcccat gaaccttttt caaaacgcca
    20701 aattcttcac gacggtaaac catctcaaag acctgccgga cacaccgctc gaaattgcct
    20761 ttgtcggcag gagcaatgcc ggaaaatcca gtgccatcaa taccctgacc aaccatgtcc
    20821 gtcttgccta cgtttcaaaa acaccgggac ggacacagca tatcaacttc ttcgagctgc
    20881 agaacggcaa ttttatggtc gatttgcccg gctacggtta tgcccaagtc cccgaagcgg
    20941 tacgcgcaca ttgggtcaat ctgctcggcg actacctccg ccatcggaaa cagcttatcg
    21001 ggctggtttt gattatggat gcccgccatc ctttaaaaga actcgacatc cgtatgctgg
    21061 actttttcca cacgaccggc agaccggttc acatcctgct gtcaaaagcc gacaaattat
    21121 ccaaaaacga acagataaaa accctgtccc aagtcaaaaa actgctcaaa ccttattccg
    21181 acaggcaaaa catcagcgta cagctgtttt ccagcctgaa aaaacaaggt attgacgagg
    21241 ccaaccgaac tgtcggaagc tggtttgacg cagcagatgc cgccgcttcc tctccagagg
    21301 aaaactgacc tcaattatac ggaaaccgta tccccccact tgaccggccg caaacattta
    21361 aaaaattgcc actgccaaat ctaaaatgcc gtctgaaaga cttttcagac ggcattttgc
    21421 ggagtcttta aaacagggaa tccaactgct gctgtttgga atccgtattg ctcggaagca
    21481 ccggcgtttc ctgtacgtcc tgacgcgttt cgtcagacct tccctgctgt tcgttttcta
    21541 ctgccgcttc atcatcttct tttgcccgtc gggaaggttg cggcgcaata ccgctgttgt
    21601 ccagcatcaa gcccggatcg gttaccatac gttccttcat atagtattcg ccattgctgc
    21661 tgaccacacc ttcaggcatt ttcatccctt tgccctgctt tcctttcaac gcaaaacgca
    21721 tatagtccac ccaaaccggc accgcaatcg taccgccgta gccggcacgc cccatactct
    21781 taggtttgtc gaagccgata tatacggcag taaccacatc agggttaaaa ccgacaaacc
    21841 acgcatcttt attgtcgttg gtcgtacccg ttttaccggc aatatccgtt cttcccaacg
    21901 cagctgcccc ccttgccgta ccgacacgga ccacatcctg cataatctta tacataatat
    21961 aggcattgcg cggatcgatt gcctgaggcg cattttgccc tgccaccaaa ggttgcattt
    22021 gggcgcgcaa cctgccgtct ctgtcataaa tcttatcgat cacgtgcgaa gaaaccctat
    22081 atccgccgtt cgcaaataca ctatatgcct ccgccacttt caacggcgtc gtctcgcccg
    22141 tacctaaagc catagacagg cttgccggca gctcggacgg cctgaagccg aaacgccgga
    22201 tatactgttg cgcgtaaccg acaccgatag acatcaaaat acggatggaa accatattct
    22261 tggaagccgt cagagcctgt ctcaaagtaa tgtagccgga atatctgccg tctgaatttt
    22321 taggtgtcca aaccgaaccg ttcggccctt tccccggcag ggaaatcggc gcatcgttaa
    22381 ccactgtgga cgcggtcatc cccttagata atgccgccga atagacaaac ggcttaaagg
    22441 tcgaacccgg ctgccgcatt gcctgaacgg cacgattgaa tgttttgctg tgaaaatcat
    22501 aaccgccgac cagcgcgcgc acagctccgg tttttgcatc cagcgaaacc aaagccccct
    22561 gcggcaacgg ctcttgaacc accgcccaac gcccgccgtt gtttttgaca cggatgaccg
    22621 cgcccctgcg gatacggtcc tcccccattt tctcattatc gaccgctcgg gccgcaaaac
    22681 ccaaggcgcg cctgtcaagc gcaacccgcc tgccgccggg cagctgtatg acgacatttt
    22741 tctttttagt aacatccaac acaacggcgg gaaccatttt atcgacggta tagagtcccg
    22801 acagatactg gctgacagtc tcctcgacat cttcactctt actcaaatcg atatagtttt
    22861 ccgcaccgcg gtagctgctg ccgcgatcga aattccgtag agccttgcgc aatgcctcgg
    22921 ttgccgcctt ctgatgatcg gtgcggaccg tggtataaac cttaaaaccc tgcgtatagg
    22981 catcttcacc atatttctca tacagttccc gacgcaccat ttccgccaca tataaagcac
    23041 tctgatcgat tttccgaaca aaccgctcat aatgcagttc ctcattcaat gcctgatcgc
    23101 gctgttgcac ggtaatcatc ttctcctcga gcatattgtt caaaatatac ttctggcgca
    23161 acttggcacg ctccggatta acaatcggat tataggcaga cggagccttg ggcagtcccg
    23221 caagcatggc ggcttccgcc aaagtcaaat ctcggacatt cttattgaaa tagatttgcg
    23281 cggcagatgc aaaaccatag gcgcgctgac cgaggtaaat ctgattgaaa tacaactcaa
    23341 ggattttgtc tttgcttaaa gactgctcga ttttataggc aagcaacacc tcattgaatt
    23401 tgcgtgtgaa cgttttttca ctgctcaaat aaaaattttt cgccacctgc tgtgtaatcg
    23461 tactcgcacc cgactgcacg ctgccggaca cgacattgcc gacggcagcg cgggcaacac
    23521 cccaaacatc caccccccaa tgccggtaaa agcgtttatc ctcggcggca ataaccgcat
    23581 tccgcaacac ctcggggaaa tcgccgattt ttgtaaattc gcgccgctgc tccccataca
    23641 taccgatgac ttctccatcc gccgaataaa tagtcaacgg cattttaggc tggtaatgct
    23701 gcaaagaatc caaagacggc agtttcggat acgttaccaa aatagcaatg gcaaccagac
    23761 ccactccaaa tacacaaaaa ccaaaaaaca aaccaaaaca agtagttaaa atctttttaa
    23821 tcatagctga ataataattt accattattg gtattaaata aagtaaaata gcaaccgatt
    23881 tctacaaagc acggtttcaa tgtgcaaaga acaaggaatc cattacggat accgaaacgg
    23941 ttactcactg tacaaataaa gcaggaactt tcatcatgcg cttgtttaaa agcttgaaaa
    24001 accctaaaaa aacagatgcc aagctcccta aaaaatcttc gggactcaat aaccgcgcgg
    24061 caatcggcat cgatatcgac cagcattcca tcaaaatggt acaattgtca ggacgtagtt
    24121 taaaccaaat tcaattggaa aaatacgtca ttgccaaatt accaaagaat atcattcaag
    24181 gcaataaagt ccaaaattac gatcaacttg ttacatattt gcaacaagcc tatgccaaac
    24241 tgggtacttc gtgcaaaaac atcgtcgcgt ccgtcccgca aaatctggca accatcgaac
    24301 aattgaccta cacggccaaa gatgcagaat tggacctgca ggggttcgtg gagtcctcca
    24361 tctccgaagc cagctcgata tcgctcgaag aagccaatta cgactatcag gtcttgtccc
    24421 aatcggccgt cggcgaagct gttttgtccg tcgcatcgag aaaggatgaa atcgaacccc
    24481 tgattgacgc attcaacgca gccggtatga aattatccgc gcttgatgtg gacattttcg
    24541 gacaatacaa cgcctacgcg ctgtggataa accattttgc ccccgagctt gcggacgaaa
    24601 aagtggccat tttcggcgta tatgccgcac agacctacgc cctggtcatc caagacggaa
    24661 aaatcctata caaacaggaa acctccgtca gcgaagaaca gctcaaccaa ctcatccagc
    24721 gcacctatca ggtaacagca gaaaaagcgg aagagatcat caactccccg caaaaacctt
    24781 ccgattacca agaaagcgtg gcaaactatt tcaaccagca gattacccaa gaaatacaaa
    24841 gggtcttgca gttttattac accacgcaga ccgcagacga tatgaccgac atcaagcata
    24901 tcctgctgac gggggaagcg gtgcgccaga aaggcatcgc ccaaaccgtc gcctcgcaaa
    24961 ccaatgcgga tgtacaatgc gtccatcccg cgcgttattt tgcgaacgac ctcaaaacag
    25021 acgaacaaca attcgaactt gatgcgccga cactgaccaa ggcgttcggt ttggcggtac
    25081 ggggattata attatgaaca atttaatcaa aatcaacctc ctcccctaca gggaagagat
    25141 gaacaaacgc aaacagcagc agtttaaaac gctgatgtac ggcgccgtgc tgacgggcgt
    25201 tgccgccgtt gcggcaacct acctgtttat cgacaatatg atcaataaac agtcggaaaa
    25261 aaacacgctg ctggaaatct ccatcgcaca cttggatacc gagctgtcgg aaatacaaaa
    25321 gctcaaacag gaaaaagatg ccttcctgat taagaaaaac aaaatcgggg agctccagat
    25381 caaacgcctc caagccgcaa aaatcctcga cagcctgaat gaggccgtcc ccggaagcac
    25441 ctacctaacc tcgctggatg ccgttaccgc cgactcttat cggctcagcg gcaggacatc
    25501 cagcgacaac cgcgttgccg ccatgatgag ggcgatgccc aataccggca tattcaagca
    25561 acccgaattg ttaagcatca agaaaaacaa ttcgcatcaa gaatttaccc ttcaggcaac
    25621 attacaacct atcgtaaagg cggccgaatc caaagagaat ccggcttcgg gaaacgcaca
    25681 ggaggcaaac tgaatggctt ctaaatcatc taaaaccaac ttggatctca acaaccttca
    25741 cctgctcaac cttcctgcca ggctttttat cgccctgctg gtcgttgccg ccgtgctggg
    25801 gctcggttat gccggattgt tcaaaagcca gatggaatcc cttgaggaat atgaagcaaa
    25861 agaaaccgaa ctgaaaaaca cctacaaaca gaaaagtatc gacgcggcca gcctgaacaa
    25921 ccttagggac gaacttgcct caatccgctc tgccttcgat atcatgttga aacagctgcc
    25981 gacagatgca gaaattccca atttggttca agagcttcat caggcgggtt cgagcaacgg
    26041 tctgcgcttg gacagcgtta tgccccaacc tcccgtagat gacggtccca tcaaaaaatt
    26101 accctattcc atttccatta ccggaaatta cgaacagatc agccaattta cccgcgatgt
    26161 cggcagtctc tcccgaatca ttacccttga gtcgctgaaa atcgcccaat cttcggaaaa
    26221 cggcggcaat cctgacggca agagcagtat cctgaacctc agcgccattg ccaccaccta
    26281 ccaagcaaaa tccgtagaag agcttgccgc agaagcggca caaaatgccg agcaaaaata
    26341 acttacgtta gggaaaccat gaaacactat gccttactca tcagctttct ggctctctcc
    26401 gcgtgttccc aaaattctga agacctaaac gaatggatgg cacaaacgcg acgcgaagcc
    26461 aaagcagaaa tcataccttt ccaagcacct accctgccgg ttgcgccggt atacagcccg
    26521 ccgcagctta cagggccgaa cgcattcgac ttccgccgca tggaaaccgc caaaaaaggg
    26581 gaaaatgccc ccgacaccaa gcgtattaaa gaaacgctgg aaaaattcag tttggaaaat
    26641 atgcgttatg tcggcatttt gaagtccgga cagaaagtct ccggcttcat cgaggctgaa
    26701 ggttatgtct acactgtcgg tgtcggcaac tatttgggac aaaactacgg tagaatcgaa
    26761 agcattaccg acgacagcat catcctgaac gagctgatag aagacagcac gggcaactgg
    26821 gtttcccgta aagcagaact gctgttgaat tcttccgaca aaaacaccga acaagcggca
    26881 gcacctgccg cagaacaaaa ttaagaagag gattactcca ttatgaatac caaactgaca
    26941 aaaatcattt ccggtctctt tgtcgcaacc gccgcctttc agacggcatc ggcaggaaac
    27001 attacagaca tcaaagtttc ctccctgccc aacaaacaga aaatcgtcaa agtcagcttt
    27061 gacaaagaga ttgtcaaccc gaccggcttc gtaacctcct caccggcccg catcgccttg
    27121 gactttgaac aaaccggcat ttccatggat caacaggtac tcgaatatgc cgatcctctg
    27181 ttgagcaaaa tcagtgccgc acaaaacagc agccgtgcgc gtctggttct gaatttgaac
    27241 aaaccgggcc aatacaatac cgaagtacgc gggaacaaag tttggatatt cattaacgaa
    27301 tcggacgata ccgtgtccgc ccccgcccgc ccagccgtaa aagccgcgcc tgccgcaccg
    27361 gcaaaacaac aggctgccgc accgtttacc gagtccgtag tatccgtatc cgcaccgttc
    27421 agcccggcaa aacaacaggc agcggcatcg gcaaaacaac aggcggcgac accggcaaaa
    27481 caaaccaata tcgatttccg caaagacggc aaaaatgccg gcattatcga attggcggca
    27541 ttgggctttg ccgggcagcc cgacatcagc caacagcacg accacatcat cgttacgctg
    27601 aaaaaccata ccctgccgac cgcgctccaa cgcagtttgg atgtggcaga cttcaaaaca
    27661 ccggttcaaa aggttacgct gaaacgcctc aataacgaca cccagctgat tatcacaaca
    27721 accggcaact gggaactcgt caacaaatcc gccgcgcccg gatactttac cttccaagtc
    27781 ctgccgaaaa aacaaaacct cgagtcaggc ggcgtgaaca atgcgcccaa aaccttcaca
    27841 ggccggaaaa tttcccttga cttccaagat gtcgaaatcc gcaccatcct gcagattttg
    27901 gcaaaagaat ccgggatgaa cattgttgcc agcgactccg tcagcggcaa aatgaccctc
    27961 tccctcaaag acgtaccttg ggatcaggct ttggatttgg ttatgcaggc gcgcaacctc
    28021 gatatgcgcc agcaagggaa catcgtcaac atcgcgcccc gcgacgagct gcttgccaaa
    28081 gacaaagcct tcttacaagc ggaaaaagac attgccgatc tgggcgcgct gtattcccaa
    28141 aacttccaat tgaaatacaa aaatgtggaa gaattccgca gcatcctgcg tttggacaat
    28201 gccgacacga ccggaaaccg caacacgctt gtcagcggca ggggcagcgt gctgatcgat
    28261 cccgccacca acaccctgat tgttaccgat acccgcagcg tcatcgaaaa attccgcaaa
    28321 ctgattgacg aattggacgt acccgcgcaa caagtgatga ttgaggcgcg tatcgtcgaa
    28381 gcggcagacg gcttctcgcg cgatttgggc gttaagttcg gcgcgacagg caggaaaaaa
    28441 ctgaaaaatg agacgagcgc attcggctgg ggcgtgaact ccggcttcgg gggcggcgat
    28501 aaatgggagg cccaaaccaa aatcaacctg ccggttgccg ctgccgcaaa cagcatttcg
    28561 ctggtgcgcg cgatttcctc cggcgcgttg aatttggaat tgtccgcatc cgagtcgctt
    28621 tcaaaaacca aaacgcttgc caatccgcgc gtgctgaccc aaaaccgcaa agaggccaaa
    28681 atcgaatccg gttacgaaat tccttttacc gtaactacag cctcgggcgg cggcaactct
    28741 accaacacgg aactcaaaaa agccgtcttg gggctgaccg ttacgccgaa catcacgccc
    28801 gacggacaaa tcatcatgac cgtcaaaatc aacaaagact cgcctgcaca atgtgcttca
    28861 ggcaacaaca caatcctatg tatttcgacc aaaagcctga atacgcaggc tatggttgaa
    28921 aacggcggca ctttgattgt cggcggtatt tatgaagaaa acaacggcaa tacgctgacc
    28981 aaagtccccc tgttgggcga catccccgtt atcggcaacc tctttaaaac acgcgggaaa
    29041 aaaaccgacc gccgcgaact gctgattttc attaccccga ggattataga tacggccggc
    29101 aacagcctgc gctattgatg cgtcaaaata agggcatatg ttttacagca tatgcccttt
    29161 ctttatgctt tttgccgcga ccgaaatgcc gtcattcccg cgcaggcggg aatccaactt
    29221 gtccggtttc ggttgttttt cgtctcgtaa cttttgagcc gtcattcccg cgaaatcgga
    29281 aatccagtcc gttcagtttc ggtcatttcc gataaattcc tgttgctttt catttctaga
    29341 ttcccacttt tgtgggaatg acggcggaag ggataaatcc tcgcaatcca aagcctcgtc
    29401 atttccacaa aaaacagcaa cccgaaacac cccgtcattc ccgagcaggc gggaatctag
    29461 gtctttaaac ttcggttttt ttccgataaa ttcttgcctc attgaaattc tagattcccg
    29521 ctttcgcggg aatgacggga tatgggtttc cgtgcggacg tgttcggatt tccgcctgcg
    29581 cgggaatgac gattcgggta ttactgacga ttcatcgggc cgtagggtgg gcttcagccc
    29641 actaatttca ccgcatcaag ggttttgggg aataggcgta actcggcggt ttcggttttt
    29701 ggcgaagttg gttggaatcg gcgggctgaa gcacacccta cagtccaccc tacaacccat
    29761 cttacgcatc cgccttacgc atttatcctt cgcctgccga tatgccgtca ttcccgcaca
    29821 ggcgggaatc tagaaccgca acgcggcagg aatctgtcgg atacggctga aaccgaacgg
    29881 actggattcc cgcctgcgcg ggaatgacgg ctgcagatgc ccgacggtct ttatagcgga
    29941 ttaacaaaaa tcaggacaag gcggcgaagc cgcagacagt acggatagta cggaaccgat
    30001 tcgcttggtg cttcatcacc ttagggaatc gttccctttg agctaaggcg gggcaacgcc
    30061 gtaccggttt ttgttcatcc gctatagtat tgataaacat attatcttca atatattcaa
    30121 ttggataatt gtttacctaa gcaaagataa ttgccttttc ctgacaaatt aagtgaaatc
    30181 aacggattgt caaaacacag cctgaaataa aaaacctccc tgatttcttt tatttttcct
    30241 taaaatcaga aaagttcggg atggtcgggt tatttttcca aacgtaccgc cgccctgccg
    30301 atttcgtata aaatcccgcc gtaacccgac aagcccgaac cctgccgccc cgaaaggcgg
    30361 ggggggtcaa acattaagga accgtgatga aaaactttaa cggcaaactc atcctcatcg
    30421 gactgatggg cgcgggcaaa actacgctgg gccggcaaat ggcgcagcgg ctggattacc
    30481 gtttttacga cagcgatcac gaaatcgccg cagcggcggg cgttcccatc cccaccatat
    30541 ttgaaatgga aggcgaacag ggattccgtt cgcgcgaaac cgccatactc aaaaaactga
    30601 ttgtcctgcc gcatatcgtc ctgtccaccg gcggcggcgc ggtgttaaaa gaagaaaacc
    30661 gcgcccttat ccgcaaaagc ggcacggtcg tttatctgca cgccccgccc gaaaccctgc
    30721 tcgaacgcac gcgctgcgac aacagccgcc ctttgctgca agttgccgat cctttggcga
    30781 aattgcgcga actctacgcc gcacgcgacc ccgtttaccg ccaaaccgcc gactttaccg
    30841 tagaatcggc aaactgccgg gaaaccgtgc aaaccctgct caaacgctta tcccgataaa
    30901 ccggcatatg cgccgctccc cgaaaaccaa accgcacccc gcccggcggg ccggcggttc
    30961 aaactttaag gaacaacaat gaaaacactg accgtacaca cgccttcgca cagctacccc
    31021 atctttatcg gcaacgggct gctgccgcag gcgggaagcc tgctcaaacc gcatttgggc
    31081 aaacgcgccg ccatcatcac caacgaaacc gtcgccccgc tctacctcgg cacgcttcag
    31141 acggcattgg atgcggcagg cgtatcccat ttcagcatca tcccgcccga cggcgaggcg
    31201 cacaaaaact ggcagacgct caacctcatc tttgacgggc tgatgcaaaa ccgcgccgaa
    31261 cgtaaaacca cgctgattgc gctgggcggc ggcgtgatcg gcgacatggt cggctttgcc
    31321 gccgccacct accagcgcgg cgcgccgttc atccaaatac cgaccacgct gttgagtcag
    31381 gtcgactcat cggtgggcgg aaaaaccgcc atcaaccacc cgctcggcaa aaatatgatc
    31441 ggcgcgtttt accagccgca ggcggtgctt gcagatttgg acacgctgca caccctgccc
    31501 gcccgcgaac tgtccgccgg tatggcggaa gtcatcaaat acggcgcgct cggcgacatc
    31561 ggcttttttg aatggctgga acagcatatg cccgaactga tggcactcga acgcgcgccc
    31621 ctcacccaag ccgtgtaccg ctgctgccaa atgaaggcag acatcgtcgc ccaagacgaa
    31681 accgaacagg gcatacgcgc atggctcaac ctcggacaca ccttcggaca cgccgtcgaa
    31741 gcggaaatgg gttacggcgt atggctgcac ggcgaggccg ttgccgccgg ctgcgtgttg
    31801 gcggcgcgtt tgtccgaaca actgggcaaa acctccgccg cagataccgc gcggctcgcc
    31861 gccctgctcg aagccgccgg actgccgtcc gcaccgcccg tgtttgcctt tgaaaaatgg
    31921 ctggcacata tgagccacga caaaaaaatc agcggcggca tcatgcgctt tatcggtctg
    31981 aaccggctgg gcgaagccgt catcaccgaa attaccgaca cggacatcct ccggcgcacc
    32041 ctgcaaccgt atctctgatt tcctctgccg atgtgttgcc gcgcgggttt gacgcacgat
    32101 gatgactttc catcatcatt ctccgcaaaa gcgggcatcc ggttattcca tattgcaggg
    32161 atttatccgg aataacgaca acctgtccgc cgtcatttcc gcgcagatgg aaatttggaa
    32221 attcaaaatc acaggaattt atccggaata tagcggatta acaaaaatca ggacaaggcg
    32281 gcgaagccgc aggcagtaca aatggtacgg aaccggttcg cccggtgctt gggcgcctta
    32341 gggaatcgtt ccctttgagc cggggcgggg caacgccgta ccggtttttg ttaatccgca
    32401 acagcaaccc tgtcgccgtc attaccgcga aagcgggaat ccagtccgtt cagtttcggt
    32461 catttccgat aaattcctgt tgcttttcat ttctagattc ccactttcgt gggaatgacg
    32521 gcggaagggt tttggttttt tccgataaat tcttgaggca ttgaaattcc agattcccgc
    32581 ctgcgcggga atgacggctc aaaagttacg gaacgaaaaa caaccgaaac cggacaagtc
    32641 ggattcccgc ctgcgcggga atgacggaat cttaagtttc cgtctttgtt ttctgttttc
    32701 gcgggaataa tggggaacaa gccgtatttc agacggcatt ttcagttcgg ggtataatcc
    32761 gaatacttgc gaccatctga atcatttgga caaactatgt gtcaactgct gggcatgaac
    32821 tgcaatacgc cgaccgatat tatgttttcc tttgaaggct tccgccgcag gggcggcatt
    32881 accgaccatc acgccgacgg tttcggcatc ggctttttcg aaggcaaagg cgtgcgcctg
    32941 ttccatgacg acaagccgag tgcaaattcc cccgtcgccg acctcgtgcg cgcctaccag
    33001 attaaatcgg aaaacgtcgt cgcccacatc cgcaaagcct cgcaaggtca aacctcgctg
    33061 gcgaacaccc atccctttat gcgcgaaatg tggggcggct actggctgtt tgcccacaac
    33121 gggcatttgg tcgatttttt ccccgaacag ggagaatttt tccaccccgt cggcacaacc
    33181 gattccgaac gcgcgttctg ccacatcctc aaccgcctgc gcacccgctt tgccgcccgt
    33241 cccgacgacg acacgctgtt tgacgcgatt gcggggctga cgcacgaaat ccgcaagttc
    33301 gggctgttta acttcatgct ttcagacggc atttccctgt ttgcccacgc cagcacgctg
    33361 ctgcactaca tcgtccgcca agccccgttc ggcaaagcgc gcctgctcga cgacgatgta
    33421 atggtcgatt ttgccgaagt aaccacgccg gacgaccgcg tcgccgttat ctccaccctg
    33481 ccgctgactc gcgatgaatc gtggtcccaa cttgccgtga acgaactggt catgttccgc
    33541 gaaggcaaca tcgtccggca cgaccgtccc gaaaatcccg tctatatgag tgccgaagaa
    33601 ggcctggaaa tcgcccgcgc cgccggcgta tcggtttgac gttcagacgg catcaggaag
    33661 aaacaccatg aaatgcccgt tttgcagcca cccagacacc cgagttgccg attcccgcct
    33721 gatggaagag cgcaataccg tccgccgccg ccgccactgc cccggctgcg gcaaacgctt
    33781 cggcacgctc gaaaccgtcg aactcaaaat gcccgccgtc atcggtccgg acaagaaacg
    33841 ttcgcccttc aatgcacaac gcctccgcaa cgacctgacc gccgccgccc gaaaatccgc
    33901 cctgacaccc gaacagattg acgaaaccgt ccgcctgacg gaacacaggc tctacacttc
    33961 gggtcagcgc gacatatcct catccgaact tgtcgaaatc gtgctggaag agctgttcgg
    34021 gcaaaacacg gaagccgccg tccgtttcgc cgccctgcac aaacgcttcg acagcccgga
    34081 acatttcgcc tcgtggctgg cgcaagccgt caaaacaggc ggcaaaacct gattccccca
    34141 acccatactg atacggtatc cctatgtttt cggacacaaa tatatccatg atggaaaacg
    34201 ccctccgact tgccgctttg gggcgttttt ccacttcacc caacccgcgc gtcggctgcg
    34261 ttatcgcaca cggcagacaa attgtcggac agggcttcca cgtcaaagcg ggcgaacccc
    34321 atgccgaagt ccacgccctg cgtcaggcgg gggaaatggc aaaaggcgcg accgcctttg
    34381 ttaccctcga accgtgcagc cattacggac gcacaccgcc ctgcgccgaa gccctgctcc
    34441 gttccggcgt aacacgcgtc gtcgccgcca tgcgcgaccc caacccgccg gttgcaggca
    34501 aagggcttgt cctgctcaaa gcagcgggca tcaagacgga atgcggacta cttgaaaaca
    34561 aagcacgcga actcaaccgg ggatttttat cgcgcatcga acgccgccgc ccctttgtcc
    34621 gcctcaaatg cgccgtttcg ctggacggca aaaccgccct ttcagacggc agcagctttt
    34681 ggattaccgg cgaggaagcg cgtgccgacg tacaggtttt gcgtgccgaa agctgcgcgg
    34741 tgctgaccgg catcggcacg gtgttggcgg acaatccccg gctcaacgtc cgcgcttttc
    34801 caactttgcg ccaacccgcg cgcatcgttt tagacagccg cctgcgcctg cccccgaaca
    34861 gccatttggt taccgacgga caatctccga ccctcattgc cacactcgag cgcaacgaag
    34921 acaggcttcg cccctatcgc aaacacgccc acgtccgcat cctgatgccg tctgaaacgg
    34981 caggcggcaa aatcgacctg caccgcctga tgcgcctcct tgccggcgaa ggatacggtg
    35041 aagtgatggt cgaagcaggc tccgaactca catccgcatt tttggcggaa aatttggcgg
    35101 acgaaatcgt gctgtaccgt tcgcccaaaa tcctcggcgg cggcaaagac ctgttttccc
    35161 tgcccgaaaa ccgtgccgcc ctttccgcac cgcccttgtg gacacccgtt tcaagcgaaa
    35221 tcctcggaca cgacatcaaa accgtgttcc ggaaaaacgg caacgccttt taaagggttt
    35281 gccgccgttt tgctatataa taacgccgat aaaaaacggc ccgttcagac cgccgcccgc
    35341 ccggaaaagc gcaacccgga ctgccgcacc ccgccggcag ccgcgacggc ctgaaagccg
    35401 tcaaattccg atcaagaaag gtttcagaca gcacaggcag catcacgccg ccgcccggac
    35461 atcaaaaatg gacacaaaag aaatcctcgg ctacgcggca ggctcgatcg gcagcgcggt
    35521 tttagccgtc atcatcctgc cgctgctgtc gtggtatttc cccgccgacg acatcgggcg
    35581 catcgtgctg atgcagacgg cggcgggact gacggtgtcg gtattgtgcc tcgggctgga
    35641 tcaggcatac gtccgcgaat actatgccgc cgccgacaaa gacactttgt tcaaaaccct
    35701 gttcctgccg ccgctgctgt tttccgccgc gatagccgcc ctgctgcttt cccgcccgtc
    35761 cctgccgtct gaaatcctgt tttcgctcga cgatgccgcc gccggcatcg ggctggtgct
    35821 gtttgaactg agcttcctgc ccatccgctt tctcttactg gttttgcgta tggaagggcg
    35881 cgcccttgcc ttttcgtccg cgcaactcgt gcccaaactc gccattctgc tgctgttgcc
    35941 gctgacggtc gggctgctgc actttccggc gaacaccgcc gtcctgacca ccgtttacgc
    36001 gctggcaaac cttgccgccg ccgccttttt gctgtttcaa aaccgatgcc gtctgaaggc
    36061 cgtccggcgc gcgccgtttt cgcccgccgt cctgcaccgg gggctgcgct acggcatacc
    36121 gctcgcactg agcagccttg cctattgggg gctggcatcc gccgaccgtt tgttcctgaa
    36181 aaaatatgcg ggcctggaac agctcggcgt ttattcgatg ggtatttcgt tcggcggggc
    36241 ggcattattg ctccaaagca tcttttcaac ggtctggaca ccgtatattt tccgtgcaat
    36301 cgaagaaaac gccacgcccg cccgcctctc ggcaacggca gaatccgccg ccgccctgct
    36361 tgcctccgcc ctctgcctga ccggaatttt ctcgcccctc gcctccctcc tactgccgga
    36421 aaactacgcc gccgtccggt ttaccgtcgt atcgtgcatg ttgccgccgc tgttttacac
    36481 gctgaccgaa atcagcggca tcggtttgaa cgtcgtccgc aaaacgcgtc cgatcgcgct
    36541 tgccaccttg ggcgcgctgg cggcaaacct gctgctgctg gggcttgccg taccgtccgg
    36601 cggcacgcgc ggcgcggcgg ttgcctgtgc cgcctcattc tggttgtttt ttgttttcaa
    36661 gacagaaagc tcctgccgcc tgtggcagcc gctcaaacgc ctgccgcttt atatgcacac
    36721 attgttctgc ctggcctcct cggcggccta cacctgcttc ggcacaccgg caaactaccc
    36781 cctgtttgcc ggcgtatggg cggcatatct ggcaggctgc atcctgcgcc accggaaaaa
    36841 tttgcacaaa ctgtttcatt atttgaaaaa acaaggtttc ccattatgaa aatcatcctg
    36901 actacttcta tgtcggttct gggaggcacg ggcacgacat catcgattgc caaatgtcgt
    36961 gcaaaaccga ccccgttcag tccgacgaaa tcgtccgccg cttcaggcgc gacatttcct
    37021 atcggaaaat cgtcaacctg attgaaagat tggcaaatga gtaaagccgt caaacgcctg
    37081 ttcgacatca tcgcatccgc atcggggctg attgtcctgt cgcccgtgtt tctggttttg
    37141 atatacctca tccgcaagaa tctgggttcg cccgtcttct tcattcggga acgccccgga
    37201 aaggacggaa aaccttttaa aatggtcaaa ttccgttcca tgcgcgacgc gcttgattca
    37261 gacggcattc cgctgcccga cagcgagcgg ctcacgccct tcggcaaaaa actgcgcacc
    37321 gccagtttgg acgaactgcc tgaactgtgg aacgtcctca aaggcgagat gagcctggtc
    37381 ggcccccgcc cgcttttgat gcagtatctg ccgctttaca acaaatttca aaaccgccgc
    37441 cacgaaatga aaccgggcat taccggctgg gcgcaggtca acgggcgcaa cgcgctttcg
    37501 tgggacgaaa agttctcctg cgatgtttgg tacaccgaca atttcagctt ttggctggat
    37561 atgaaaatcc tgtttctgac agtcaaaaaa gtcttgatta aagaaggcat ttcggcgcaa
    37621 ggggaagcca ccatgccccc tttcgcgggg aatcgcaaac tcgccgttat cggcgcgggc
    37681 ggacacggca aagtcgttgc cgagcttgcc gccgcactcg gcacatacgg cgaaatcgtt
    37741 tttctggacg accgcaccca aggcagcgtc aacggcttcc ccgtcatcgg cacgacgctg
    37801 ctgcttgaaa acagtttatc gcccgaacaa ttcgacatca ccgtcgccgt cggcaacaac
    37861 cgcatccgcc gccaaatcac cgaaaaagcc gccgcgctcg gcttcaaact gcccgttctg
    37921 attcatcccg acgcgaccgt ctcgccttct gcaataatcg gacaaggcag cgtcgtaatg
    37981 gcgaaagccg tcgtacaggc cggcagcgta ttgaaagacg gcgtgattgt gaacactgcc
    38041 gccaccgtcg atcacgactg cctgcttgac gctttcgtcc acatcagccc gggcgcgcac
    38101 ctgtcaggca acacgcgtat cggcgaagaa agccggatag gcacgggcgc gtgcagccgc
    38161 cagcagacaa ccgtcggcag cggggttacc gccggtgcag gggcggttat cgtatgcgac
    38221 atcccggacg gcatgaccgt cgcgggcaac ccggcaaagc cccttacggg caaaaacccc
    38281 aagaccggga cggcataagc gattaaaata aacttccgta caaaccgatt ttgacaacac
    38341 ctgcggcgcg cgcccgattc ttcggaacac gcccccttca gacggcatag ggtcggaaat
    38401 gccgtccgaa cccgacggac caaacaccat gctgaacacc gccctttccc catggccgag
    38461 cttcacccaa gaagaagccg atgccgtttc caaagtcctg ctgtccaaca aagtcaacta
    38521 ctggacgggc agcgaatgcc gcgaatttga aaaagaattt gccgcctttg ccggcacgcg
    38581 gtacgccgtc gccctttcca acggcacgct tgcgctcgat gccgcactca aagcaatcgg
    38641 cataggcgcg ggcgacgatg tgattgttac ctcgcgcacc ttcctcgcct ccgcctcctg
    38701 cattgtgaac gcgggcgcaa accccgtgtt tgccgacgtg gatttgaaca gccaaaacat
    38761 cagcgcggaa accgtcaaag ccgtgctgac cccgaatacc aaagccgtca ttgtcgtcca
    38821 ccttgccggt atgcctgccg aaatggacgg catcatggct ttggcaaaag aacatgattt
    38881 gtgggtgatt gaagactgcg cccaagcgca cggcgcgacc tacaaaggca aatccgtcgg
    38941 ctctatcggg cacgtcggcg cgtggtcgtt ctgtcaagac aaaatcatca ccaccggcgg
    39001 cgagggcggt atggttacga ccaacgacaa aaccctgtgg gaaaaaatgt gggcgtacaa
    39061 agaccacggc aaaagctacg atgccgtgta ccaccgcgaa cacgcgcccg gtttccgctg
    39121 gctgcacgaa agtttcggca ccaactggcg catgatggaa atgcaggctg tcatcggccg
    39181 catccagctc aaacacctgc ccgaatggac ggcgcgccgc caagaaaacg ccgccaagct
    39241 ggcagaaagt ttgcgcaaat tcaaaagcat ccgcctgatt gaagtcgccg gctacatcgg
    39301 acacgcgcaa tacaagttct acgccttcgt caaacccgaa cacctgaaag acgactggac
    39361 gcgcgaccgc atcgtcagcg aactgaacgc gcgcaacgtc ccctgctatc aaggcggctg
    39421 ctccgaagtg tatttggaaa aagccttcga caacacgccg tggcggccca aagagcggct
    39481 gaaaaacgcc gtcgaactgg gcggcaccgc cctgacgttc ttggtgcacc cgacgctgac
    39541 cgacgacgaa atcgcgttct gcaaaaaaca catcgaagcc gtcctgaccg aagccgcacg
    39601 ataacccttc agacggcata tgccgcctga aagcacatac cgccccacga tatgaatctg
    39661 gaaaccctga tcgccctgcc gcgcaacatc aagaaaatct gtttcctcat acacgatttt
    39721 ctgatgattt tcaccgcctt ttggttcacc caaagcctga aggccgacta ctcggacgaa
    39781 tggttcgatt ttgccaactg gcagtctttt ttgctgactg ccttgctgac catcacatta
    39841 tttatccgaa tggggcttta ccgcgccgtt acacgctttg tcagtttcca cgtcctgacc
    39901 accgcctttg ccggcagcct cgcctccgcc gtattgttct tcctcaacac attgattttt
    39961 gaagaaaggc tgcgcctcgc cctgccgatt gtctatttct tactgctgtt tgtttccgtg
    40021 accggctcgc gtatggtttt gcgcggactc ctgtccgacc accagaaaaa aacacatgac
    40081 cccgtcatca tttacggcgc ggggcgttcg ggtcggcagc tccttgaagc cgtcaaacag
    40141 atgcgcgaat attccgccgc cgcctttgtg gacgacaacc ccaagctttg gcacaccgtc
    40201 atctacgacc ttgccgttta ccagcccgat gccatcgcct tcctcatcga acgctacggc
    40261 gtggaaaaaa tcctgctcgc cattcccagc gcgactcagg aacaacgccg ccgaatcatc
    40321 agcaaactga aagcctatcc gtgcgaagtg ttgaccattc ccggaatgaa agacctgatg
    40381 gacgggaaaa tcagcatcgg cacgctcaaa aaaatctctg tgtccgacct gctcgggcgc
    40441 gattccgtcg cacccgacga ccgcctcatg aatgccgaca ccgaaggcaa aaccgtcatg
    40501 gtaaccggcg cgggcggctc catcggttcg gaactctgcc gccagattat ccgccgccgc
    40561 cccgaaaggc tgctgctgtt cgagctgtcc gaattcgccc tgtacaccgt tgaaaaagaa
    40621 ttgtgcgaat actgcgcccg aaacggcatc gccgccgaaa tccttccctt tttgggttcg
    40681 gtgcaaaacc gcacgctgct cacgcacatt atgaccgcct tttccgttgc gaccgtctat
    40741 cacgccgccg cctacaaaca cgtccctatg gtcgagttca acaccgtcga gggcatacgc
    40801 aacaacatct tcggcacact cgaatgcgcg cttgccgcca cggcttcggg cgtggaaacc
    40861 ttcgtcctca tctccaccga caaagccgtc cgccccgcca acacgatggg tgcgggcaaa
    40921 cgcatggcgg aactctgcct tcaggcactc gccgccgaac ccggacaaaa aacccgcttc
    40981 agcatggtac gtttcggcaa tgttttaggc tcgtccggct ccgtcgtccc gctgtttgaa
    41041 aaacagattg ccgaaggcgg ccccatcacc ctgacccacc ccgacatcac gcgctatttc
    41101 atgaccatac ccgaagcggc gcaactggtt atccaagccg gcgcgatggg cagaggcggc
    41161 gacgtgttcg tcctcgatat gggcgaatcc gtcagaatca ccgaccttgc ccgccaaatg
    41221 attaccttaa gcggactcaa acccaaaacg cccgaacagc ccgacggcga catcgaaatc
    41281 ctcattaccg ggctgcgccc cggcgaaaaa ctctacgaag agttgctcat cggcgacaac
    41341 gtccgcaaaa ccggccatcc gcgcatcatg accgccgacg agaccatgct gccgtggcac
    41401 gaactctccg ccctgctcga ccgcatccgc accgcctgcg accgttacga ccagcaggca
    41461 atccgcgacc tgctcgtcaa cgccccgacc ggctttaccc cgaccggcgg catctgcgac
    41521 ctgctttggg tatgcgaaac acacagaaaa aatgccgtct gaaccttcag acggcatacc
    41581 gtacaaacca atctgcctta cacacactga gtttgacatg cagttctcgg cattcggcga
    41641 aaaattcacg caacacagcg gcatcctgca actgatggac gacctcggcg acgcgctcaa
    41701 aagcgacaag cccgtcaata tgctcggcgg cggcaacccg gcgcgcattc ccgaaatcga
    41761 tcgggcgttc gccgacatat tttccaagct ggcggcggaa cacgccgtcg agaacatcgg
    41821 caactactcc aatccccaag gcgatgccgc gctgattgac gcgctgaccg ccttccccaa
    41881 ccgcgaatac ggctggaacc tgaccgtcgg caatatcgcg ctaaccaacg gttcgcaaaa
    41941 cgcgtttttc tatttattca acctcttcgg cggcaaattc aagctttcag acgacctttc
    42001 cgtagagaaa gccatcctgc tgccgctcgc gcccgaatac atcggctatg ccgacgtgca
    42061 tgtcgaaggg cggcacttcg tttccgtcaa acccaaaatc ggaaacgtcg aacacgaagg
    42121 cgaagcaggc ttcttcaaat accgcgtgga ctttgacgca ctggaaaacc tgcccgaact
    42181 caaagcgggc aaaatcggcg cgatttgctg ttcgcgcccg accaacccga ccggcaacgt
    42241 gttgaccgac ggcgaaatgg cgcgtttgga cgctttggcg cgtgaacacg gcattccgcc
    42301 gattatcgac aacgcctacg gaatgccgtt ccccaacatt attgacagcg gcgtaacgct
    42361 gaattggcac gaaaacatca tcctctgctt cagcctttcc aaagtcggcc tgccgggcgt
    42421 tcgcaccggc atcatcgtcg ccgcgcccga agccgtcaaa gccgtcagca gcctgaacgc
    42481 gattgtgaac cttgccccca cgcgcttcgg cgcggccatc gccgccccgc tgctggaaag
    42541 cggcgagatg aaacggcttg ccgaccaagt catccggccg ttttaccgca atcaggcgca
    42601 aaccgccgtt tcgctgctca agcgcgagct gggcgcgtac ccgatgaaaa tccacaaacc
    42661 cgaaggcgcg attttcctgt ggctctggtt tgaaaacctg cccgtttcgt cgcaaaccct
    42721 gtacgaaatg ctcaaagccg aaggtacgct gattattccg ggcgaacatt tcttcgtcgg
    42781 catcgacacg caagactacc cgcacgcggg cgagtgcatc cgtatgagta tcgcacagga
    42841 cgctcaaacg ctggaaaaag gcatcgccgc catcggcaaa accgtccgaa aaccgtacga
    42901 caacgtttaa aacgcaaaaa atgccgtctg aagacctttc agacggcatt ttcatccgca
    42961 ttcaatgtcg ggaaaaatgc gcccgcaccg gtttgcagtt ttccggaaga tcgggacacg
    43021 cgccgaggat gccgccgctg aagtcgtcta aacggtggaa gtcgctgccc gcgcttgcca
    43081 acaatccgaa gcggtctgcc aaaagcgcgt agttgaggcg gtcgtttttg cagcagttgc
    43141 cgctgtggac ttcgatgccc gcgccgccga ggtttttaaa ttcttcaaac aggttgcgct
    43201 tggcggttgc cgacaaatca taacgcatcg gatgggcaat caccgccatg ccgcccgcgc
    43261 cgttgacggc ggagacgcag tctgccagcg tcgcccattc gtggcgtacc gcgcaggatt
    43321 tgccgtcgcc caagtatttg gtgaacgcct gccgcttgtt tttgacgtgt ccgtttttga
    43381 tgaggaactc ggcgacgtgg gtgcggctga ccatttcttt gtttgccgcc agcgccagcg
    43441 cgccgtcgta tgcgccgccg atgcctttct tttcgagctt ggcggcgatg gcttcaagac
    43501 gtttcagacg gcctttgcgg acatctgcca acaggttttg caggttttcg tcctgctcgt
    43561 cgaaatccaa accgacaacg tgtatggtac gcccgcgcca cgttaccgaa atttccacgc
    43621 cgttaatcag gcgcaaaccg agcctgtcgg cttcggcacg cgcttcggag atgccgcccg
    43681 tgtggtcgtg gtcggtcaac gccagcagcg tgcagccgtt ttgatgtgcg aggcggacga
    43741 cttcggcggg ggggagcata ccgtcggaaa cggtggaatg gcagtgcagg tctatcatgg
    43801 ggtgttatgt ggtggtgaat gaaggacggg atgtttcaat gttgtcggac agtgtggcgg
    43861 cggcggtcat tttaaaaaac aggtgtatgg caaatgcaaa ggaaaagccg ctatgccgtc
    43921 attcccgcgc aggcgagaat ccagactttg atttattgga aatgtttaag gttaaccgct
    43981 atttcaaact tccggattcc tgctttcgag ggaatggcga tatgaacgtt ttcaatttta
    44041 atctactata aaagaccgtc tgaaaacgtg gttttatcaa gtccaaccgt tttcagacgg
    44101 catcgtccgg ccaacccgct tccttcagtt ttttccgttg cgcatcgtag catgccttgt
    44161 ccgcccagta aatcgtctga atgcacgcct cgccgcagtc gctgccgcag cattcccacg
    44221 actcggggcg gacgggttcg tccaaaagcg gctcgcccaa aagggcttcg gctttatgct
    44281 tcagggtcgt atccatcggc gatttccaag cgcgcgccgt caaactcgat gacttctccg
    44341 ccgcgtattt tggccgtttt gcggatttcg gttccgccgt tgcgcaacac cagcccttcg
    44401 gcgataaatg cttttgcctg tccgccgctt tcggcaagtc cggccaattt caagaggtcg
    44461 cacaaggcga tgtattcgtt gtcttcgaga tagacggtgg cttccataat gtcccctttt
    44521 agaaagaggg cgttattgta gcacctgccg ccgccgcacc caaaattgcc gcaaaaccgg
    44581 cgatgtgtcc gcactgcctg ttccgtaaaa atgccgtctg aaaccccgta tgccgccatc
    44641 cgtccaaaga aatcctgccc aacggcaggc tgcaaatcct gttccccgac gaatccgcat
    44701 tgacgctgat gcacatcctc aaacgcggac tgcccgatac accggcaatc ggcatcaaaa
    44761 cgaaatcaaa aacctgtttg aacgtaaaat ctatttaact gcttgccgtc cgtccgaata
    44821 aggtatatag ttccttataa ctagtttgat agtcctttat atctatcaat actccttggg
    44881 aagcctccgc cacacggcag gaggcatttt tttgccgtcg taaaagctca aaaaacattt
    44941 acaggtcatg ccgtctgaat ccgaaacggc attacctgca ccgccatcta aagacaaccc
    45001 tgctacaata cgccttttat tgtccacgcc gattttgcca tgaccgagcc gacctacatc
    45061 cccctgcgcc tgcataccga attctccatt accgacggta tggtgcggat taaaaaactg
    45121 attgccaaag cgcaagaata cggtttgcct gctttgggca tcagcgattt gatgaacgaa
    45181 ttcggtttgg tgaaattcta taaagcctgc cgcggcgcag ggattaagcc cgtcggcgcg
    45241 gcggacgtgt ggataggcaa tccgaatgcg cccgacaagc cgttccgcgc catgctggtt
    45301 atccgcaacg atgcgggtta tctgcgcttg agcgagcttt tgacggaggc ttatgtcggc
    45361 caagaccgca atatccatca tgcggaactc aatcccgaat ggctggaaaa cggcgacaac
    45421 agcggcttga tttgtttgag cggcgcgcat tacggcgaag tgggcgtgaa tctgttgaac
    45481 ggcaatgaag acgcggcgcg tgcggcggcg ttgaaatatg cggcatggtt tcccgatacg
    45541 ttttatttag agctgcaacg cctgcccgaa cgccccgaat gggaggcttg cgtttccggc
    45601 agcgtgaagc tggcggagga actgggtttg ccggtggtag caacgcatcc gacacagttt
    45661 atgaaccgcg acgatttcaa cgcgcacgag gcgcgggtgt gcatcgcggg cggctgggtg
    45721 ctgacggaca agaaacgtcc gcgcgatttc acgccgagcc agtttttcat tccgccggaa
    45781 acgatgctgg agcgtttcgc cgacttgccc gaagccttgg aaaacacggt ggaaatcgcc
    45841 aaacgctgca acttgcacat cacattgggc aaaaacttcc tacccctttt ccccacgccc
    45901 gacggtttat cactcgatga ctgtctcatc aaactctcca acgagggttt gcaggaacgc
    45961 atggttcagc tttatcccga cgaggcggaa cgggcggcaa aaatgccgga atatcaggag
    46021 cggctggact ttgagctgaa catcatcatc caaatgaaat tccccggcta tttccttatc
    46081 gtacaagact ttatcaactg ggcgaaaacg cacggctgtc cggtcgggcc gggacgcggt
    46141 tcgggcgcgg gttcgctggt ggcgtattcg ctgaagatta ccgacctcga cccgctgaaa
    46201 tacgcgctgc tgttcgagcg tttcctaaac cccgaacgcg tttccatgcc cgactttgac
    46261 gtggacttct gtcaggcaaa ccgcggccgc gtgattgaat acgtgcgcga aaaatacggc
    46321 gctcaggcgg tcagccagat tgtgactttc ggcacgatgt cgtccaaagc ggtcatccgc
    46381 gacgtggggc gtgtgctgga actgccgttt atgctgtgcg acaaactgtc caagctgatt
    46441 ccgttggaag ccaacaaacc cctgagtttg gacgacgcga tgaaggcgca gccgcagatt
    46501 caggaattgc ttgaagcgga agaagcggac gaactgatta cgctggcgaa aaaactggaa
    46561 gacctgacgc gcggtttggg tatgcacgca ggcggcgtgt tgattgcgcc gggcaagatt
    46621 tccgattaca gccccgtgta tcaggcggac gaatccgcct cgcccgtatc catgtacgac
    46681 aagggcgacg tggaagacgt gggtttggtg aagttcgact ttttgggcct gcgcaacctg
    46741 accattatcg aaatggcgca gaacaacatc aaaaacaccg ccggcgatat cgtcgatgtc
    46801 ggcaagattc cgcttgacga ccagactgcc taccaaatct tccgcgatgc gaacaccacc
    46861 gccgtcttcc agttcgagtc gaccggcatg aaaaaaatgc tgaaaacggc gcatacgacc
    46921 aagtttgaag aactcatcgc cttcgtatcg ctctaccgac ccggcccgat ggacaacatt
    46981 cccgacttcg tcgcacgcat gaagggacag gaattccaat acatccaccc gctgctggaa
    47041 ggcatcctcg cgccgaccta cggcattatg gtgtatcagg aacaagtgat gcaggcggcg
    47101 cagattatcg gcggctactc gctcggcggc gcggacctgc tgcgccgcgc catgggtaag
    47161 aaaaagcccg aagagatggt gaaacaccgc gaaatcttcg ccgaaggtgc ggcaaaacaa
    47221 ggcatttcgc gcgaaaaatc cgacgaaatc ttcaactaca tggaaaaatt cgccggctac
    47281 ggtttcaaca aatcccacgc cgccgcctac gccctgattt cctaccagac cgcatggctc
    47341 aaagcccact atcccgccga atttatggcg gcgacgatgt cgtccgaatt ggacaacacc
    47401 gaccagctca aacatttcta cgacgactgc cgcgccaacg gcatcgagtt cctgccgccc
    47461 gacattaacg aatccgacta ccgcttcacg ccgtatccga acatgaaaat ccgctacgca
    47521 ctcggcgcga ttaaaggcac gggcgaagcc gccgtcgaat ccatcatcgc cgcgcggcaa
    47581 agcggcggca aatttaccgg cctgttggac ttctgcgagc gcgtcggcaa agaacacatg
    47641 aaccgccgca ccctcgaagc cctgatacgc ggcggcgcgt tcgacagcat cgaacccaac
    47701 cgcgccatgc tcttggcgaa catcgacctt gccatggaca acgccgacca aaaagccgcc
    47761 aacgccaatc agggcgggct gtttgacatg atggaagacg ccatcgaacc ggtgcggctc
    47821 atcgacgcac ccatgtggag cgaatcggaa aaactcgccg aagaaaaaac cgtcatcggc
    47881 ttttacctgt ccggccaccc gttcggcccg tatgcccaag aagtccgcca aatcgccccg
    47941 accaaattag gccgtctgaa accgcaagac agcgtgcgcc tcgccggatt cgttaccgcc
    48001 gtgcgcacca tgatgggcaa acgcggcaaa atcgccttcg tcagcctcga agattcgagc
    48061 gggcaggctg aaatcatggt cggcggacaa acgctggaaa actgcgccga ctgcctcaaa
    48121 gccgaccaag tgctgattat cgaatccaaa gtcagccgcg acgattacgg cggcggcgac
    48181 gggctgcgca tcatggcaaa ccaagtcatg accctgcaaa cggcgcgcga acgctacgcc
    48241 cgcagcctca gcctcgccct tgccccgcat cacgacatcg gcggactggt acggctgctc
    48301 gccgcccacc aactgcccga cacgccgcgc atcccgcttc aattgtcgta tgccaacgaa
    48361 aaagcgtcgg gcaggcttca agtgcctccg aaatggacgg ttacaccgag ttccgcattg
    48421 ttcggcgaac tggaaacatt gctcggcagc cggtcggtgc gcgtgaattg gtaaccaaaa
    48481 atacaaatgc cgtctgaagc ccaaaaccgg tttcattcgt actttattcg aatgattgaa
    48541 taaaagtaac tgccaagaaa aacgtatttt ttggttattt cgccagccta aataaatcaa
    48601 ccggggcgat tgatatccgt gtacatgaca cagacagcgc caaagggaaa aacggcattt
    48661 tcaaaagtat cggtgtcaaa accgcccttt cattccaaaa ataccaaatc gacgaaccgg
    48721 gcaaagaaat cagaccgtgc cgcctgaaaa aacgcccgcc cgtccgttaa attaatctat
    48781 ccctgtttca ggcggcctga aacagggatt tttatatcaa gataaaatga gaacgggagc
    48841 gacaaccacg ggcaaagtcg gcgcgaacta tcaaaaattg tagcactgcg aaatgagaac
    48901 gggagcaata acccttaggt agctcttgtt atagcggatt aacgaaaatc aggacaaggc
    48961 gacgaagccg cagacagtac aaatagtacg gaaccgattc acttggtgct tcagcacctt
    49021 agagaatcgt tctctttgag ctaaggcggg gcaacgccgt accggttttt gttaatccgc
    49081 tatattttcc gatgcaaaac aaagcagtca tatatttgat tccccctacc gttgccacgc
    49141 ttccctcaaa tattcgacgc agtcggtcag cgagtaaaac gggacattgc cgtggtcggc
    49201 attcggatat tcccggaaaa atacggcggt cccgcgcctg tccaactctg ccgccatttg
    49261 ttcggcctgc cctgccatgt cgcgttcttc cctgcgtttg caaccgctgc tccgctcgag
    49321 tgcgccgatg ttgaggcagg catcgatgcc gtccagccgg ttttcagacg gcataaagtc
    49381 gagtatccgc ctgttgtgcc accaaatcga ggggatacga gccaatgccg tctgaaacag
    49441 cggtgggaaa gcagggaata cagtccgaac agtgcgccga acgagtgtcc gaatacggcg
    49501 gtttcattac ggttaagggt gtagcggctt tctaaaaagg cggtcagttc gctgtcgata
    49561 aagtcggcga agcggtctgc ctgtccgaac tgccgccgtt cgtctgctgt ggcgttgtct
    49621 ccaagcggcg gcgtgtagtc ggcggcacgc tgcgccaggt cgcgcacact gcctgtcgtg
    49681 tagccgatac cgacaatcag gcagggggcg ttgcttcggg taacggggtt gttcatcagc
    49741 aactgcatga tgttgtacag cgcgggaaaa aggcttcgcc gtcgaggaca aagaggacgg
    49801 gatagccttc agactgcatt tcgccgagtg ttgccgtctg aatccgatag attcgccccg
    49861 tgcaggtgga tttgatttcg gtttcaaagg cttggggcag tatggcaggt tggaatgtgt
    49921 cggtcggtat gggtttcatg atgttcggct tgtgggtcag actggcggca agcggtaaaa
    49981 ccgaaccggc aaagcggtct gcctgccggt tcggtctgtt ttccttcgca atgccatact
    50041 ccggttgtga gcgcataggg tatgccgcgc agcttgttgt ggtttgatta tgctgcggct
    50101 gccgtttcag acggcatatt ggtctttaaa aactgtaacg caggtttgcc gtcaggctgc
    50161 gctccgaacc gggaatgtta aaggtgttcg tgccgccgac gcgggcgtag taatggcggt
    50221 tgaagatgtt gtcggcattg atttgcagct tcagcttggg cgtgaagcgg tatgccgcca
    50281 tcgcatcgaa cgtggcataa ccgcctgcat gcatccctgc agatgaagta atgccgctca
    50341 tcgcgttcac gccgccgccg acggtcagcc cgggcgtaac ttggtaagtc gtccacaggt
    50401 ttgcgctgtg tttgggcacc agcaggaaga tgccgtcgtc gcgtggattg gcggcggttt
    50461 tgatttggct gtgcagatag ctgtaacctg catggatttg ccatttcggt gtaatcgcac
    50521 cgctgatttc ggtctcaacg ccttccatca cgcgtttgcc caatgcggcg taacgggtgt
    50581 tgcggttgtt cgggttcggc ggcgtttttg tctttcaggc ggcaggggga gacgcgggta
    50641 ttgaggcggt catccatata gctgccttta acgagctgta atcgccgttt ttctcggtgg
    50701 caatcgcgtt gtacgaacgc tgccctttga tatggacggt ttccaaatcc gccgtttgtg
    50761 cggcaaaaac cggagacgag agtgctgcca aaaccgtggc ggcggtcata ttgatgcgga
    50821 aaactgacat aaactgtccc atctgtataa atgataatgg ttctatttta ataaagcaca
    50881 acgcggcttg ttcggaaaaa catatcgctc agccgacaaa ttttgtcgaa aatgcgacac
    50941 gtctgcgttt tccgcataaa atctgctttt ttactgcaac caacctgcca tgaccccgcc
    51001 caaactcatc atcttcgact gggacggcac gcttgccgat acgacccaac ccatcatcga
    51061 caccatgcgc cgcagcttcg ccgaatgcgg ttttccgccg cccgaagcgg agcgcgtccg
    51121 cagcctgatc ggatacagcc tgcccgaaat catccgcgcc ctgctcgaaa tgccttctga
    51181 agctgccgtt gccgacatcg cgcgcactta ttccgcgcat tacctcaatc ccaacaaccg
    51241 caatatgaca ctctttcccg atgccccgcc ctgtctggac aagctcaaag cgcaaggctt
    51301 ccggcttgcc gtcgccacgg gcaaagggcg ggcgggtttg gacaacgcca tcagccaaac
    51361 cgccaccggc ggctattggc tcgccaccgc ctgcgcgggg gaatacccct ccaaaccctc
    51421 gcccgaaatg gtattcggac tctgcggcga actgggactc gacccgaaag aggcattggt
    51481 tgtcggcgat acggcgcacg acctgcatat ggcggcaaac gcaggcgcgg cggcagtcgg
    51541 cgttgccacc ggcgcacatt cgcgcgaaca gctccttggc gcaccgcatc tcgccgtatt
    51601 ggacggtttg tccgaactgc ccggttttct tgcacgacat tacgcctgat tggtttccgc
    51661 atccggcacg cggcaaaaat gccgtctgaa gcctgttcag acggc
//
LOCUS       DAXFZM010000003        46882 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.003, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000003 DAXFZM010000000
VERSION     DAXFZM010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 46882)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 46882)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..46882
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.003"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            308..2569
                     /gene="nuoG"
                     /locus_tag="ACFJAG_000100"
     CDS             308..2569
                     /gene="nuoG"
                     /locus_tag="ACFJAG_000100"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003776117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050136 - NADH:ubiquinone reductase
                     (non-electrogenic) activity [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006120 - mitochondrial electron transport,
                     NADH to ubiquinone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoG"
                     /protein_id="HFC3979514.1"
                     /translation="MLQIEIDGKQVSVEQGATVIEAAHKLGTYIPHFCYHKKLSIAAN
                     CRMCLVDVEKAPKPLPACATPVTDGMIVRTHSAKAREAQEGVMEFLLINHPLDCPTCD
                     QGGECQLQDLAVGYGKTTSRYTEEKRSVVGKDMGPLVSAEEMSRCIHCTRCVRFTEEI
                     AGLQEITMVNRGEHSEIMPFIGKAVETELSGNVIDLCPVGALTSKPFRFNARTWELNR
                     RKSVSAHDALGSNLIVQTKDHTVRRVLPLENEAINECWLSDRDRFAYEGLYHESRLKN
                     PKIKQGGEWMDVDWKTALEYVRSAIECIAKDGNQNQVGVWANPMNTVEELYLAKKFAD
                     GLGVKNFATRLRQQDKRLSDGLKGAQWLGQSIESLADNDAVLVVGANLRKEQPLLTAR
                     LRRAAKDRMALSVLAGSKEELFMPLLSQEAAHPDEWAGRLKNLSADAEHAVTASLKNA
                     EKAAVILGAEVQNHPDYAAIYAAAQELADATGAVLGILPQAANSVGADVLGVNSGESV
                     AEMANTPKQAVLLLNVEPEIDTVDGAKAVAALKQAKSVMAFTPFVSETLLDVCDVLLP
                     IAPFTETSGSFINMEGRLQSFHGVVQGFGDSRPMWKVLRVLGNLFDLKGFEYHDTAAI
                     LKDALDAESLPSKLDNRSTWAGEGVQTASNRLVRVGGVGIYHTDSIVRRSAPLQETSH
                     AAVPAARVNPNTLARLGLQDGQTAVAKQNGASVSVAVKADAGLPENVVHLPLHTENAA
                     LGALMGIIELAGA"
     gene            2572..3648
                     /gene="nuoH"
                     /locus_tag="ACFJAG_000101"
     CDS             2572..3648
                     /gene="nuoH"
                     /locus_tag="ACFJAG_000101"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HFC3979515.1"
                     /translation="MQEWFQNLFAATLGLGDLGITVGLVVSVIVKIVIILIPLILTVA
                     YLTYFERKVIGFMQLRVGPNVTGPRGLIQPFADVFKLLFKEVTRPKLSNKALFYIGPI
                     MSLAPSFAAWAVIPFNEEWVLTNINIGLLYILMITSLSVYGVIIAGWASNSKYSFLGA
                     MRASAQSISYEIAMSAALVCVVMVSGSMNFSDIVAAQAKGIAGGSVFSWNWLPLFPIF
                     IVYLISAVAETNRAPFDVAEGESEIVAGHHVEYSGFAFALFFLAEYIFMILIAALTSL
                     MFLGGWLSPFPQSWGIVGTPSAFWMFVKMAAVLYWYLWIRATFPRYRYDQIMRLGWKV
                     LIPIGFAYIVVLGVWMISPLNLWK"
     gene            3729..4208
                     /gene="nuoI"
                     /locus_tag="ACFJAG_000102"
     CDS             3729..4208
                     /gene="nuoI"
                     /locus_tag="ACFJAG_000102"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HFC3979516.1"
                     /translation="MANLVKTFLLGELVKGMGVTLKNFFARKDTIYFPEEKTPQSVRF
                     RGLHAQRRYPNGEERCIACKLCEAVCPAMAINIESEEREDGTRRTKRYDIDLTKCIFC
                     GFCEEACPTDAIVETHIFEYHGEKKGDLHMTKPILLAIGDKYEAEIAKRKAADAPYR"
     gene            4220..4891
                     /locus_tag="ACFJAG_000103"
     CDS             4220..4891
                     /locus_tag="ACFJAG_000103"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HFC3979517.1"
                     /translation="MTFSVILFYILAAIVLYGAVRTVTAKNPVHAALHLVLTFCVSAM
                     IWMLMQAEFLGVTLVVVYVGAVMVLFLFVVMMLNIDIEEMRAGFWRHAPVAGVVGTLL
                     AVALILILVNPKTDLAAFGLMKDIPADYNNIRDLGSRIYTDYLLPFELAAVLLLLGMV
                     AAIALVHRKTTNPKRMDPADQVKVRADQGRMRLVKMEAVKPQVESAEESEVSDGLKTE
                     GEGKA"
     gene            4888..5193
                     /gene="nuoK"
                     /locus_tag="ACFJAG_000104"
     CDS             4888..5193
                     /gene="nuoK"
                     /locus_tag="ACFJAG_000104"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HFC3979518.1"
                     /translation="MITLTHYLVLGALLFGISAMGIFMNRKNVLVLLMSIELMLLAVN
                     FNFIAFSQHLGDTAGQIFVFFVLTVAAAESAIGLAIMVLVYRNRQTINVADLDELKG"
     gene            5196..7220
                     /gene="nuoL"
                     /locus_tag="ACFJAG_000105"
     CDS             5196..7220
                     /gene="nuoL"
                     /locus_tag="ACFJAG_000105"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HFC3979519.1"
                     /translation="MNDMTLYLIIALVPLAGSLIAGLFGNKIGRAGAHTVTILGVAVS
                     AVLSAYVLWGFLNGSRAKFDENVYTWLTMGGLDFSVGFLVDTMTAMMMVVVTGVSLMV
                     HIYTIGYMHDEKVGYQRFFSYISLFTFSMLMLIMSNNFIQLFFGWEAVGLVSYLLIGF
                     YFKRPGATFANLKAFLINRVGDFGFLLGIGLVLAYFGGSLRYQDVFAYLPNVQNATIQ
                     LFPGVEWSLITVTCLLLFVGAMGKSAQFPLHVWLPDSMEGPTPISALIHAATMVTAGL
                     FMVSRMSPIYEMSSTALSVIMVIGAITALFMGFLGVIQNDIKRVVAYSTLSQLGYMTV
                     ALGASAYSVAMFHVMTHAFFKALLFLAAGSAIIGMHHDQDMRHMGNLKKYMPITWLTM
                     LIGNLSLIGTPFFSGFYSKDSIIEAVKYSTLPGSGVAYFAVLASVFVTAFYAFRQYFM
                     VFHGEEKWRSLPEHHSDGHGEEHHGLGKNDNPHESPLVVTLPLILLAIPSVIIGYIAI
                     EPMLYGDFFKDVIFVNADAHPTMHIMKEEFHGALAMVSHSLHSPVLYLATAGVLSAWL
                     LYVKLPHLPAKIAQAFRPVYVLFENKYYLDALYFNVFAKGTRALGNFFWKVGDTAIID
                     NGIVNGSAKLVGAIAAQVRKVQTGFIYTYAAAMVFGVLVLLGMTFWGLFR"
     gene            7404..8567
                     /locus_tag="ACFJAG_000106"
     CDS             7404..8567
                     /locus_tag="ACFJAG_000106"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease PLD domain-containing
                     protein"
                     /protein_id="HFC3979520.1"
                     /translation="MTQLFLHSDTPNEKELISIYEKAVSEAVELYIFSAYLTHWDVKN
                     KLNSKLQEFKFIFGQDFGLSKKEAIRKVLKWLPSHLKFTLMVAQGIQGFHPKAVFWKN
                     DKNEYYALIGSSNLTHAAFNSNYEANILTKISEQDFIKVKSWADEIAMKSIPVSEDWL
                     EEYQEAEINYKKSTVRQSVMDKLFMEMPNYNQELIAARRKQMRNHQTVCNQLKNLIKQ
                     CAAGKIDNNDFYGEFNKLWSWKSENKGEGVGNRFQDKTWKRTGKSSDFRKLCIAIQSV
                     FDAPLTERDNVVAKQIDWLKECGVSTRGSVFSEMLCQEYPDRYPVLNAPIKKFLEENK
                     FKSAKGASEGSKYIDLSMKLRALLAMQSEIKDLAELDVLVQAEYRNRTDIDWE"
     gene            8681..10177
                     /locus_tag="ACFJAG_000107"
     CDS             8681..10177
                     /locus_tag="ACFJAG_000107"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HFC3979521.1"
                     /translation="MFSNYLLSLAIWIPIAAGVLVLATGKDSRAPLARVLAFMGALAG
                     FLVTLPLFTGFDRLSGGYQFTEFHEWIPLLKINYALGVDGISVLFIILNAFITLLVVL
                     AGWEVIQKRPAQYMAAFLMMSGLINGAFAAQDAILFYVFFEGMLIPLYLIIGVWGGPR
                     RVYASVKLFLYTLTGSLLMLVAMVYLYYQTGSFSIVDFQNIKQIPLGVQQLLFVAFFL
                     SFAVKVPMFPVHTWLPDAHVEAPTGGSMVLAAITLKLGAYGFLRFILPIMPDAARYFA
                     PVIIVLSLIAVIYIGMVALVQTDMKKLVAYSSISHMGFVTLGMFLFVDGQLDDWALKG
                     AVIQMISHGFVSAAMFMCIGVMYDRLHTRNIADYGGVVNVMPKFAAFMMLFGMANAGL
                     PATSGFVGEFMVVMGAVKVNFWVGALAAMTLIYGASYTLWMYKRVIFGAIHNPHVAEM
                     KDINCREFAILAVLAVAVLGMGLYPNAFIEVVHQAANDLIAHVAQSKI"
     gene            10187..11632
                     /gene="nuoN"
                     /locus_tag="ACFJAG_000108"
     CDS             10187..11632
                     /gene="nuoN"
                     /locus_tag="ACFJAG_000108"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoN"
                     /protein_id="HFC3979522.1"
                     /translation="MNWSDLNLMPALPEVALLSLLVLLLPADLWASDDKCRWTHYGAL
                     ATVAVTAAVQLAVWEQGSTSSFNGMYIADGMSRLAKMVLYALTFVLFVYAKPYNQVRG
                     IFKGEFYTLSLFALLGMSVMVSAGHFLTAYIGLELLSLALYALIALRRDSGFAAEAAL
                     KYFVLGALASGLLLYGISMVYGATGSLEFAGVLASSFNEEANEWLLKLGLVFIVVAVA
                     FKLGAVPFHMWMPDVYHGAPTSVTALVGTAPKIAAVVFAFRILVTGLGTVHHDWSLMF
                     ALLAAASLLVGNLAAIMQTNIKRMLAYSTVSHMGFILLAFMAGAVGFAAGLYYAITYA
                     LMAAAGFGVLMVLSDGDNECENISDLAGLNQHRVWLAFLMLLVMFSMAGIPPLMGFYA
                     KFGVIMALLKQGYVWLSVFAVVMSLVGAFYYLRVVKVMYFDESGRARPAAGGNNAAKS
                     LLSVNALLLVLWGIMPQTVIDWCAKALENTL"
     gene            11744..12043
                     /locus_tag="ACFJAG_000109"
     CDS             11744..12043
                     /locus_tag="ACFJAG_000109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2818 family protein"
                     /protein_id="HFC3979523.1"
                     /translation="MTASMYILLVLALIFANAPFLTTRLFGVAALKRKHFGHHLIELA
                     AGFALTASLAYILESRAGAVHNQGWEFYATVVCLYLIFAFPCFVRRYFWHTRNRE"
     gene            complement(12160..13056)
                     /locus_tag="ACFJAG_000110"
     CDS             complement(12160..13056)
                     /locus_tag="ACFJAG_000110"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004659 - prenyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HFC3979524.1"
                     /translation="MNPTNDLKAWQQRAQAQTELLLERFLPSGNEIPHTLHEAMRYAA
                     LDGGKRLRPMLVLAASELGGAVADAVGQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGK
                     PTCHIKYGEATALLTGDALQTQAFDVLSRPTELPAARQLAMLSVLAKAGGSAGMAGGQ
                     AIDLANVGKQMVQADLERMHSLKTGALIRAAVLLGATACPDLSDAELAVLDAYAAKLG
                     LAFQVIDDVLDCEADTATLGKTAGKDADNDKPTYVKLMGLEAARSYAHKLVAEAVALL
                     EPFGDKALRLRQLAEFAVARKY"
     gene            complement(13040..13264)
                     /locus_tag="ACFJAG_000111"
     CDS             complement(13040..13264)
                     /locus_tag="ACFJAG_000111"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HFC3979525.1"
                     /translation="MKKNTPKSFEEALSRLESLTQSMQGEMPLEDALAAYQEGNELVR
                     YCQTKLVQVEQKLQVLDADGTKELNLESDE"
     gene            complement(13377..14300)
                     /gene="rsgA"
                     /locus_tag="ACFJAG_000112"
     CDS             complement(13377..14300)
                     /gene="rsgA"
                     /locus_tag="ACFJAG_000112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome small subunit-dependent GTPase A"
                     /protein_id="HFC3979526.1"
                     /translation="MPSEHPFSDGISTPNPKETMNDTAQITAGYGRRYIVRTPDGTTY
                     EASTRKKRVDFACGDRVRISPVNAEQVVIEDFLPRQSLLYRQDAWKTKLIAANVTQLL
                     IVTAAVPSPSVRLLQRALLAAEAAGIRAVIVLNKADLPETALWLEKLKFYETLGYPVI
                     ETRVLENADSLRPVLQGHSNILLGQSGMGKSTLTNALLGSQTARTGDISAALDSGKHT
                     TTHARLYDLNGETQLIDSPGLQEFGLHHLQAADLPHYFPDFRHLVGQCRFHNCTHRAE
                     PGCAFKAAAETGAASPERLAFLQGITDELLG"
     gene            complement(14305..16161)
                     /locus_tag="ACFJAG_000113"
     CDS             complement(14305..16161)
                     /locus_tag="ACFJAG_000113"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HFC3979527.1"
                     /translation="MLNKIFSWFESRIDPYPEAAPKTPEKGLCRFVWSSMDGVRKWIA
                     ALAALTAGIGIMEALIFQFMGKIVEWLGKYAPAELFAEKGWELAAMAAMMVFSVVWAF
                     AASNVRLQTLQGVFPMRLRWNFHRLMLNQSLGFYQDEFAGRVSAKVMQTALALRDAVM
                     TVADMVVYVSVYFITSGVILASLDSWLLLPFIGWIIGFASVMRLLIPRLGQTAARQAN
                     ARSLMTGRITDAYSNIATVKLFFHGAREAVYAKQSMEEFMVTVRAQMRLATLLHSCSF
                     IVNTSLTLSAAALGIWLWHNGQVGVGAVATATAMALRVNGLSQYIMWESARLFENIGI
                     VNDGMATLSKPHTILDKPQALPLNVPQGAIKFEHVDFCYEAGKPLLNGFNLNIKPGEK
                     VGLIGRSGAGKSTIVNLLLRFYEPQSGTVSIDGQDISGVTQESLRAQIGLVTQDTSLL
                     HRSVRDNIIYGRPDATDAEMVSAAERAEAAGFIPDLSDAKGRSGYDAHVGERGVKLSG
                     GQRQRIAIARVMLKDAPILLLDEATSALDSEVEAAIQESLDKMMEGKTVIAIAHRLST
                     IAAMDRLVVLDKGRIIEEGTHAELLEKRGLYAKLWAHQSGGFLSEHVEWQHD"
     gene            complement(16187..16324)
                     /locus_tag="ACFJAG_000114"
     CDS             complement(16187..16324)
                     /locus_tag="ACFJAG_000114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979528.1"
                     /translation="MPSEGGAAFALTKPCVSAPRCLPDGFSRKMALLSLLSDGIVFDA
                     V"
     gene            complement(16324..16908)
                     /gene="ruvA"
                     /locus_tag="ACFJAG_000115"
     CDS             complement(16324..16908)
                     /gene="ruvA"
                     /locus_tag="ACFJAG_000115"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009379 - Holliday junction helicase
                     complex [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HFC3979529.1"
                     /translation="MISRLTGKLVEKNPPQIVIDVNGVGYEADVSMQTFYNLPPVGES
                     VQLFTQLIIREDAHLLFGFATAEERKTFRQLIKVGGIGAKTALGILSAMTADELARAV
                     AEEDVKRLSSAPGIGKKTAERMVLELRGKLVAHTVTDRLFAASPAADETEDIVSTLLA
                     LGYNEREAKAAVKGVPKGTDVGEGVRLALKNLLK"
     gene            complement(16990..17316)
                     /locus_tag="ACFJAG_000116"
     CDS             complement(16990..17316)
                     /locus_tag="ACFJAG_000116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HFC3979530.1"
                     /translation="MNIKHLLLTAAATALLGISAPALAHHDGHGDDDHGHAAHQHGKQ
                     DKIISRAQAEKAAWARVGGKITDIDLEHDDGRPHYDVEIVKNGQEYKVVVDARTGRVI
                     SSRRDD"
     gene            complement(17377..18063)
                     /locus_tag="ACFJAG_000117"
     CDS             complement(17377..18063)
                     /locus_tag="ACFJAG_000117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HFC3979531.1"
                     /translation="MTLTRKTLFLLTAAFGTHSLQTASADAVVKAEKLHASANRSYKV
                     AEFTQTGNASWYGGRFHGRKTSGGDRYDMNAFTAAHKTLPIPSHVRVTNTKNGKSVIV
                     RVNDRGPFHGNRIIDVSKAAAQKLGFVSQGTAHVKIEQIVPGQSAPVAENKDIFIDLK
                     SFGTEHEAQAYLNQAAQNFAASSSSPNLSVEKRRYEYVVKMGPFASQERAAEAEAQAR
                     GMVRAVLTSG"
     gene            complement(18191..18655)
                     /gene="trmL"
                     /locus_tag="ACFJAG_000118"
     CDS             complement(18191..18655)
                     /gene="trmL"
                     /locus_tag="ACFJAG_000118"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008175 - tRNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (uridine(34)/cytosine(34)/5-
                     carboxymethylaminomethyluridine(34)-2'-O)-
                     methyltransferase TrmL"
                     /protein_id="HFC3979532.1"
                     /translation="MLTIVLYQPEIPPNTGNIIRLCANTGADLHLVKPLGFPLDSAKM
                     KRAGLDYHEFASLTVHENFDDCLKSLAGRRIFALTTKGTARPDETAFQKGDVLLFGPE
                     TRGLPADILDSLPAAQKIRLPMRPGSRSMNLSNTVSVILFEAWRQHGYAGGV"
     gene            complement(18720..19445)
                     /locus_tag="ACFJAG_000119"
     CDS             complement(18720..19445)
                     /locus_tag="ACFJAG_000119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HFC3979533.1"
                     /translation="MNFLSCWRRIADAPTIRRCVLCHGSSGVSDGICAGCNTDLAAYR
                     TDAANSCPLCFRHVQGGAVCGGCQKKPPAFDRMWASLHYEPPVSNMIRALKHLADLGM
                     AQPLADLTMQNPPDRLSDECFDFVLPVPLSRERLLQRGFNQSESIVGLLAQRYGWQIL
                     PRHTVFRHHRPPQSTLKGGERRRNIKNAFEIRTPIPENCNILLIDDVFTTGATLDELA
                     KTLKKSGANRICCWTLARTPMKK"
     gene            19444..20193
                     /gene="bioH"
                     /locus_tag="ACFJAG_000120"
     CDS             19444..20193
                     /gene="bioH"
                     /locus_tag="ACFJAG_000120"
                     /EC_number="3.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052689 - carboxylic ester hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pimeloyl-ACP methyl ester esterase BioH"
                     /protein_id="HFC3979534.1"
                     /translation="MPDAAKKVYLIHGWGANRHAFDDLMPRLPATWPVSAVDLPGHGD
                     APFAQPFDIEAAADGIAAQIDTSADILGWSLGGLVALYLAARHPDKVRSLCLTASFAR
                     LTAAEDYPEGLAAPALGKMVGAFRTDYAKHIKQFLQLQLLHTPDAAEIIGRILPDLAR
                     CGTPQALQEALDAAERADVRHLLDKIDVPVLLVFGGKDAITPPRMGEYLHRHLKGSRL
                     VVMEKAAHAPFLSHAEVFAALYRDFVEGGLT"
     gene            20190..20978
                     /locus_tag="ACFJAG_000121"
     CDS             20190..20978
                     /locus_tag="ACFJAG_000121"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HFC3979535.1"
                     /translation="MNPQDKCWQVHRHLAEHTDQRLTLVRNAPGHILLAGADADISRS
                     LLAKRYPPAVFEEYDSRADFLAAAAAARKGGFWQKLTGRGVVQHCQSPTVPLPEACAD
                     MLWSNLGLLAAEQILPVLHNWARALKTDGLLFFTCFGRDTLAELKSRLKENGIESRSV
                     MFPDMHDLADMLAENGFYDPVTDTAKLVLDYKKAETFWADMDTLGVWRAVAWDDENAA
                     RSCVGAIFEREGGLGITLETVYGHAVKKLMLPQGENVVRFFPKR"
     gene            complement(21059..21166)
                     /locus_tag="ACFJAG_000122"
                     /pseudo
     CDS             complement(21059..21166)
                     /locus_tag="ACFJAG_000122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            21288..22661
                     /locus_tag="ACFJAG_000123"
     CDS             21288..22661
                     /locus_tag="ACFJAG_000123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gliding motility protein"
                     /protein_id="HFC3979536.1"
                     /translation="MDWRGNKPLGAAELADLKPLYKDFMYWERGLHMYKASAVVPTGY
                     VRVGNTAPLCGEDTQRYASFWGDGYDVYRQLRWRQIPEKQRKAFKKAAKSKNTVMFAG
                     REYGISKQNLSDVWDDFEDAMELKAFPCLSSLFLTKWHKNLYEYLEEYPFITRLCLEN
                     HGQTVLDFSNTRITDLSVDMTGVESLYLNEGLDSLNLKGEIKENCKVCTAGKGAGLIL
                     EVGKSVPKVRGLENLTAVNVMGIADFDMQNLSETYPKLKTIRLWGKPGNIANFSAVSG
                     FEDLEVFTAVDLFGFGADDIPHPDRLPKLHRLWMSSLPEEAAKAVKKLYKKRKEDGLD
                     LWIEKARKPEWLAQNFDNPFRDWDGAEHIPKSHAKKAAELYRKTRAGVVKLLGNPPEN
                     IGEGLAEAVKAYTGGFNKMDKKHFIDTVEREDIAEALETILDLIPDGSCADKEKLFEI
                     FDKNRNF"
     gene            complement(22698..25001)
                     /gene="recQ"
                     /locus_tag="ACFJAG_000124"
     CDS             complement(22698..25001)
                     /gene="recQ"
                     /locus_tag="ACFJAG_000124"
                     /EC_number="5.6.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase RecQ"
                     /protein_id="HFC3979537.1"
                     /translation="MTHRPTARQILHEVFGYPEFRGRQEDVINTLAGGGSLTVLMPTG
                     GGKSLCYQIPALMREGVAVVVSPLIALMNDQVASLHVAGIEAAAVNSGTSADEAREIA
                     DKLAQGRLKLLYVAPERLVTDRFLRFLDQQTVSLFAIDEAHCVSRWGHDFRPEYQQLG
                     MLAERYPNIPRIALTATADAATRADIKHYLHLDDASEFVSSFDRTNIYYQVIEKNNGK
                     KQLLDFIRKEMTGQSGIVYCLSRKKVEDAAQFLRENGLNAIPYHAGLSMDVREENQRR
                     FTHEDNIIVVATVAFGMGIDKPDVRFVAHLDMPQSVEHFYQESGRAGRDGLPAVSWLC
                     YGLNDWVLLRERIAEGNSDEVQKQIEMQKLDAMLSVCETAACRRVLLLKHFGEASEPC
                     GHCDNCLHPPVRFDGTVLVQKLLSCVYRAGQRFAAGYITNLLRGKSDDWIRGNRHEQL
                     STFGIGAELSDKEWRSVIRQCISLGYLTVNIARYQALQLTEAAKKILKGETEVMLRPL
                     KRDKPATRTLKDNWLRTEREERLWQALRVWRMKQAEAEGIPAYMIFGDKTLRDLVEKM
                     PQNLNGLHDIYGLGEAKTERFGHGILKVCQNAADFSHDAVIRPQTEREQQLRQKLEAW
                     RYEQARAENCALHTVLSDESLADMLAATPETETDLEAVHGLGSVRAAKYGRDILAVCR
                     PFSDGIDETAKHKRCLMRALIQWCNETAKHEQSEPYRILSKAALRAIAAKQPEGLAEL
                     AAVYGVGEEKAARYGAAVLAVLERDAV"
     gene            complement(25064..25846)
                     /gene="trpC"
                     /locus_tag="ACFJAG_000125"
     CDS             complement(25064..25846)
                     /gene="trpC"
                     /locus_tag="ACFJAG_000125"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004425 - indole-3-glycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006568 - tryptophan metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HFC3979538.1"
                     /translation="MTDILNKILATKAQEVAAQKAAVNAEHIRALAAEAAPVRSFIDS
                     IRGKHRLNLPAVIAEIKKASPSKGLIRPDFRPAEIARAYENAGAACLSVLTDEPYFQG
                     SPEYLKQAREAVLLPVLRKDFIIDEYQVYQARAWGADAVLLIAAALEQGQLERFEALA
                     HELGMTVLLELHDETELEKCRNLTTPLRGVNNRNLRTFEVSLDQTLSLLPALEGKTVV
                     TESGITGKADVEFMRARGVHTFLIGETFMRADDIGAEVGKLF"
     gene            complement(25897..26853)
                     /locus_tag="ACFJAG_000126"
     CDS             complement(25897..26853)
                     /locus_tag="ACFJAG_000126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HFC3979539.1"
                     /translation="MILTPPDTPFFLRNGNADTIAAKFLQHPAPAYRREMLPDSTGKT
                     KTAYDFSGGISPDAPLVVLFHGLEGSSRSHYAAELMLAVRNRGWHGAVVHFRSCGGVA
                     NTAPVFYHLGDTAEIAFALDTLTARYREIYAVGVSLGGNAPAKYLGEQGKKALPHASA
                     AVSAPVDAEAAGSRFDSGITRLLYTRYFLRTLIPKARSLQGFQTAFAAGCKTLGEFDD
                     RFTAPLHGFADRHDYYRQTSCKPLLKHVAKPLLLLNAANDPFLPPEALPRADEVSEAV
                     TLFQPAHGGHAGFVSSTGGRLHLQWLPQTVLSYFDSFRTNRR"
     gene            complement(26986..28524)
                     /gene="murJ"
                     /locus_tag="ACFJAG_000127"
     CDS             complement(26986..28524)
                     /gene="murJ"
                     /locus_tag="ACFJAG_000127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0034204 - lipid translocation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HFC3979540.1"
                     /translation="MNMLGALAKVGSLTMVSRVLGFVRDTVIARAFGAGMATDAFFVA
                     FKLPNLLRRVFAEGAFAQAFVPILAEYKETRSKEATEAFIRHVAGMLSFVLIVVTALG
                     ILAAPWVIYVSAPGFTKDADKFQLSISLLRITFPYILLISLSSFVGSILNSYHKFGIP
                     AFTPTFLNISFIVFALFFVPYFDPPVTALAWAVFVGGILQLGFQLPWLAKLGFLKLPK
                     LNFKDAAVNRVMKQMAPAILGVSVAQISLVINTIFASYLQSGSVSWMYYADRMMELPG
                     GVLGAALGTILLPTLSKHSANQDTEQFSALLDWGLRLCMLLTLPAAAGLAVLSFPLVA
                     TLFMYREFTLFDAQMTQHALIAYSFGLIGLIMIKVLASGFYARQNIKTPVKIAIFTLI
                     CTQLMNLAFIGPLKHAGLSLAIGLGACINAGLLFFLLRKHGIYRPGRGWAAFLAKMLL
                     ALAVMCGGLWAAQACLPFEWAHAGGMRKAGQLCILIAVGGGLYFASLAALGFRPRHFK
                     RVES"
     gene            28962..29660
                     /locus_tag="ACFJAG_000128"
     CDS             28962..29660
                     /locus_tag="ACFJAG_000128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HFC3979541.1"
                     /translation="MKSRHLALGVAALFALAACDSKVQTSVPADSAPAASAAAAPAGL
                     VEGQNYTVLANPIPQQQAGKVEVLEFFGYFCPHCARLEPVLSKHAKSFKDDMYLRTEH
                     VVWQKEMLPLARLAAAVDMAAAESKDVANSHIFDAMVNQKIKLQEPEVLKKWLGEQTA
                     FDGKKVLAAYESPESQARAGKMQELTETFQIDGTPTVIVGGKYKVEFADWESGMNTID
                     LLADKVREEQKAAQ"
     gene            complement(29717..30721)
                     /gene="amgK"
                     /locus_tag="ACFJAG_000129"
     CDS             complement(29717..30721)
                     /gene="amgK"
                     /locus_tag="ACFJAG_000129"
                     /EC_number="2.7.1.221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramate/N-acetylglucosamine kinase
                     AmgK"
                     /protein_id="HFC3979542.1"
                     /translation="MQRQTELKNWLQTVYPERDFDLSFAAADADFRRYFRAAFSDGGS
                     VVCMDAPPDKMSVAPYLKVQKLFDMVNVPQVLHADTDLGFVVLNDLGNTTFLTAMLQE
                     QGEAAHKALLLEAIGELVGLQKASREGVLPEYDRETMLREINLFPEWFVAKELGRELT
                     FKQRQLWQQTADTLLPPLLAQPKVYVHRDFIVRNLMLTRGRPGVLDFQDALYGPISYD
                     LVSLLRDAFIEWEEEFVLDLVIRYWEKARAAGLPVPAEFDEFYRRFEWMGVQRHLKVA
                     GIFARLYYRDGKDKYRPEIPRFLNYLRRVSRRYAELAPLYALLVELVGDEELETGFTF
                     "
     gene            30791..33196
                     /locus_tag="ACFJAG_000130"
     CDS             30791..33196
                     /locus_tag="ACFJAG_000130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS-assembly protein LptD"
                     /protein_id="HFC3979543.1"
                     /translation="MARLFSLKPLVLALGFCFGTHCAADTVAAEEADGRVAEGGAQGA
                     SESAQASDLTLGSTCLFCSNESGSPERTEAAVQGSGEASVPEDYTRIVADRMEGQSQV
                     KVRAEGSVIIERDGAVLNTDWADYDQSGDTVTVGDRFALQQDGTLIRGETLTYNLDQQ
                     TGEAHNVRMETEQGGRRLQSVSRTAEMLGEGRYKLTETQFNTCSAGDAGWYVKAASVE
                     ADRGKGIGVAKHAAFVFGGVPLFYTPWADFPLDGNRKSGLLVPSVSAGSDGVSLSVPY
                     YFNLAPNFDATFAPGIIGERGATFDGQIRYLRPDYSGQTDLTWLPHDKKSGRNNRYQA
                     KWQHRHDISDTLQAGVDFNQVSDSGYYRDFYGGEEIAGNVNLNRRVWLDYGGRAAGGS
                     LNAGLSVQKYQTLANQSGYKDEPYAIMPRLSADWHKNAGRAQIGVSAQFTRFSHDGRQ
                     DGSRLVVYPGIKWDFSNSWGYVRPKLGLHATYYSLDSFGGKASRSVGRVLPVVNIDGG
                     TTFERNTRLFGGGVVQTIEPRLFYNYIPAKSQNDLPNFDSSESSFGYGQLFRENLYYG
                     NDRINAANSLSTAVQSRILDGATGEERFRAGIGQKFYFKDDAVMLDGSVGKNPRSRSD
                     WVAFASGGIGGRFTLDSSIHYNQNDKRAEHYAVGAGYRPAPGKVLNARYKYGRNEKIY
                     LQADGSYFYDKLSQLDLSAQWPLTRNLSAVVRYNYGFEAKKPIEMLAGAEYKSSCGCW
                     GAGVYAQRYVTGENTYKNAVFFSLQLKDLSSVGRNPAGRMDVAVPGYIPAHSLSAGRN
                     KRP"
     gene            33298..34299
                     /locus_tag="ACFJAG_000131"
     CDS             33298..34299
                     /locus_tag="ACFJAG_000131"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HFC3979544.1"
                     /translation="MMKIKALMIAAALLAAADVHAAPQKAKTAPAKAVKAAATAQKEA
                     APAQQQGGIRFSDGIAAVADNEVITNRRLAEAVAEAKATLPEDAQISESELSRQVLMQ
                     LVNQSLIVQAGKRRNIQASEAEIDAVVAQNPALKNLSPTQRRELADNIIAEKVRQQAV
                     MQNSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAESTIRK
                     IYDQARNGTDFAGLARRYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPV
                     RTQFGWHIIKLNEVRDAGTPEERIRNSVRQYIFQQKAGQATVNLLRDLHSGAYVDIR"
     gene            complement(34777..36657)
                     /locus_tag="ACFJAG_000132"
     CDS             complement(34777..36657)
                     /locus_tag="ACFJAG_000132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNB domain-containing ribonuclease"
                     /protein_id="HFC3979545.1"
                     /translation="MNIFYEESGQFKVAVVVQKNDATYQVDTQHGKRTKVKANNVFAE
                     FDGDMAAFLENAQAQAADIDTDLLWEVCGEEEFTAEAIAEEYYGHAPTKTELAATLIA
                     LYAAPVYFYKKAKGVFKAAPEETLKQALAAIERKKQQDAQIDAWAEALKRGEMPSEIA
                     ADLRTILHAPDKQSLTYKAFTKAADALKTSAYELAKKTGGITSIPQYLQEGFEIKYFP
                     KGTGFPDLSLPEMPDLPKADVTAFSIDDESTTEVDDALSLTDLGNGTKRVGIHIAAPS
                     LAVRQGGGMEQIIMQRLSTVYFPGGKITMLPENWITAFSLDAGAYRPAVSIYFDVDGE
                     FNVGEPTCKIEAVNIAANLRIQAIEPHFNAETGLDQAGEMMFAHHQDLIWFYQFATAL
                     QKARGKYEPDRAPQYDYSIELDEEGNVSVVRRERGSPIDTLVSEMMILANSTWAQMLD
                     ENGLPGLFRVQPAGKVRMSTQSEPHIGMGVQHYGWFTSPLRRAADYINQKQLISLIDD
                     TAEPLYQKSDAALFAALRDFDTAYAAYADFQRQMEAYWSLVYLQQQGISELTATILKE
                     DLVRIEGLPLTTRATGIPFDALPKSQALFKITELDAEKQFVSLNYIKAAAPGGKTAGN
                     AV"
     gene            36813..37445
                     /locus_tag="ACFJAG_000133"
     CDS             36813..37445
                     /locus_tag="ACFJAG_000133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0009691 - cytokinin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HFC3979546.1"
                     /translation="MENVNRVPEQARYDAERRQADEALADVFPAVSIFGSARTPQDHA
                     DYAFACRLARRLSDSGIAVISGGGPGIMEAANKGAFAGKSVSVGLNIALPHEQKPNPY
                     QDIALRFSRFAERKAVFFRYSQAYVVMPGGFGTLDELFEILTLVQTGKVPPRPVVLVG
                     KAFWSGLAEWINAQLLARGMISEGAASLFSISDDEDEIIAYLSEHGLQTA"
     gene            37517..38887
                     /gene="purB"
                     /locus_tag="ACFJAG_000134"
     CDS             37517..38887
                     /gene="purB"
                     /locus_tag="ACFJAG_000134"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004018 - N6-(1,2-dicarboxyethyl)AMP
                     AMP-lyase (fumarate-forming) activity [Evidence IEA];
                     GO_process: GO:0006188 - IMP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HFC3979547.1"
                     /translation="MINPIASLSPLDGRYAQSVEALRPIFSEYGLMKARVKVELNWLK
                     ALAAEPKIAEVPPFSAETLAEIDKVIENFSLEDAAAVKAIEATTNHDVKAIEYWLKKR
                     FAEVPEVAAVSEFIHFACTSEDINNLSHALMLQQARETVILPKLAEIIGKLTDMAHEL
                     AAVPMMSRTHGQPATPTTLGKETANVVYRLQRQFKILQAQEFLGKINGAVGNYNAHMA
                     AYPDVDWETHCRNFVEISLGLTFNPYTIQIEPHDYMAEFFQTLSRVNTILIDFSRDVW
                     GYISLGYFKQKVKAGEVGSSTMPHKVNPIDFENSEGNLGMANAVLGFLAEKLPVSRWQ
                     RDLTDSTVLRNMGVGVGYAVLGFAAHLRGLNKLEPNPAALAADLDVTWELLAEPIQTV
                     MRRYGVANPYEKLKDLTHGKDGITPEVLKLFIESLEIPAEAKAKLLELTPALYVGKAE
                     ALAKRI"
     gene            38967..40835
                     /locus_tag="ACFJAG_000135"
     CDS             38967..40835
                     /locus_tag="ACFJAG_000135"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HFC3979548.1"
                     /translation="MQAVRYRPEIDGLRAVAVLSVIIFHLNNRWLPGGFLGVDIFFVI
                     SGFLITGIILSEIQNGSFSFRDFYTRRIKRIYPAFIAAVSLASVIASQIFLYEDFNQM
                     RKTIELSTVFLSNIYLGFRLGYFDLSADENPVLHIWSLAVEEQYYLLYPLLLIFCCKK
                     TKSLRALRHISIILFLILTATSFLPAAFYTDILNQPNTYYLSTLRFPELLVGSLLAVY
                     GQTQNGRRQTENGKRQLLSLLCFGALLVCLFVIDKHDPFIPGITLLLPCLLTALLIRS
                     MQYGTLPTRILSASPIVFVGKISYSLYLYHWIFISFAHYITGDKQLGLPAVSAVAALT
                     AGFSLLSYYLIEQPLRKRKMTFKKAFFCLYLAPSLMLVGYNLYSRGILKQEHLRPLPG
                     TPVAAENNFPETVLTLGDSHAGHLRGFLDYVGGREGWKAKILSLDSECLVWVDEKLAD
                     NPLCRKYRDEVEKAEAVFIAQFYDLRMGGQPVPRFEAQSFLIPGFQARFRETVKRIAA
                     VKPVYVFANNTSISRSPLREEKLKRFAINQYLRPIQAMGDIGKSNQAVFDLVKDIPNV
                     HWVDAQKYLPENTVEIHGRYLYGDQDHLTYFGSYYMVREFHKHESLLKHSRGGALQ"
     gene            complement(40971..41585)
                     /locus_tag="ACFJAG_000136"
     CDS             complement(40971..41585)
                     /locus_tag="ACFJAG_000136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003700499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite resistance TerB family protein"
                     /protein_id="HFC3979549.1"
                     /translation="MNFTRLLNQVLSTVQKKGSTFSGSPLNSFGGGALVAGVASMLLN
                     GKNRKTITKIGSTAALGYLAYRGYQMWQQNKGRATVTQSDFQPAGKTEETYSRTVLRT
                     MIAAAASDGMIDEAERRTIEQESGTDPETAAWLAAEYRLPASIGDIAAAVGNDEALAA
                     ETYLAARLVCADLSRKETVFLARLSQALKLDDNLVESLERQLGI"
     gene            complement(41621..43771)
                     /gene="dinG"
                     /locus_tag="ACFJAG_000137"
     CDS             complement(41621..43771)
                     /gene="dinG"
                     /locus_tag="ACFJAG_000137"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase DinG"
                     /protein_id="HFC3979550.1"
                     /translation="MLTDLEKNAIRDHYQNIGKNLPGFRPRASQREMIAAVANAFSRT
                     LTREEGGEPPKREGESIAVIEGPTGVGKSLAYLLAGGIMAQTRGKRLIVSSATVALQE
                     QLVDRDLPFLVEKSGLELTFALAKGRGRYLCPYKLYQLTQSNAQQNLLGFEAPAVLWD
                     SKPKPEELKLLRDIADEFSARRFNGDRDAWPEKIDDAIWLKVTNDRHGCLKAACPNRP
                     ECPFYLARDMLETVDVVVANHDLLLADISMGGGVILPAPENSFYCIDEAHHLPKKALS
                     RFAAEHSWNIAVWTLEKLPQLTGKIAALTDKAELANLADEAAASLLDSLHEWQFHLAE
                     EPSLSMGLSENDRRTNSEPTWLWEDGKIPEGLETTVSNTAIAARSLLKHVVGLNDALS
                     AARREKEQDGALIDRLTGEFGLFIARIEQISAVWDLLSTVSIEGEEPLAKWIARRADD
                     KNDYIFNASPISSASHLANSLWRRAAGAVLTSATLQSLGSFNLILRQTGLLWLPETTT
                     LALKSPFDFEKQGELYIPSIYASPKDPEAHTAAVIEWLPKLISPTEAIGTLVLFSSRK
                     QMQDVALHLPGDYLPLLLVQGELPKAVLLQKHHQAIEEGKASIIFGLDSFAEGLDLPG
                     TACVQVIIAKLPFAMPDNPIEKTQNRWIEQRGGNPFIEITVPEAGIKLIQAVGRLIRT
                     EQDYGRVTILDNRIKTQRYGQQLLAGLPPFKRIG"
     gene            complement(43952..45250)
                     /locus_tag="ACFJAG_000138"
     CDS             complement(43952..45250)
                     /locus_tag="ACFJAG_000138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding domain-containing protein"
                     /protein_id="HFC3979551.1"
                     /translation="MPSETALPLYADTRAAHTLVWFRQNLRIRDNAALCAAVAEGSPV
                     IGICIDDAETDNPRRAAFYRQSAAELAQGLARRGIPLYTAASPAGLVRLAVRLNIRAV
                     IADESHTFADKLADNALWHELDKHGIALTFVNDRSVFGKTDLTPDNGTAHTDFNRYRE
                     VWLDRFSKQPPAGSDLFAAYRQPFPENLPAPPPAALSDGIFLSQNGGETAAWRQWRRF
                     LEQAASYSVLKDFPSRKNTSLMGAYLSVGCISPRLLARESLERRLNAWADNIIRRDFF
                     LQLALQHADDDPSDGNPEHTLRLTLWQQGRTGIPIIDAAMRCLHKTGSLHPALRRLSA
                     DFFCHVLNLPRREGEIWFARQLTDFDAAINQGNWRLAASRHTCPDIAAASYRTDPDGT
                     FIKRHIPELAHLSADTVHTPWRFACSVDTHGYPARPVAGV"
     gene            complement(45240..46151)
                     /locus_tag="ACFJAG_000139"
     CDS             complement(45240..46151)
                     /locus_tag="ACFJAG_000139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001216 - DNA-binding transcription
                     activator activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HFC3979552.1"
                     /translation="MDTLFSLKVFRQVVQSGGFTRAADALGISTAMASKHVSHLENTV
                     QAKLLHHNSRNLSLTEAGEEYYRQCSYALDTLDDAAQKAAGGTEKPQGLLRVTMPLWF
                     AGSQICNWLAEYRERYPEVALELILDNRHVDLIAEGVDLALRVSQTLSPSLIARPLAE
                     IEFALLASPDFLRRNGVPETPEEVAGLPAVLPTYTNQQKLDLTRKSDGKKYRLELTPV
                     IRTDNTLMMREMIKAGACIGYQPLWAAEHDLRCGPLVRLLPGYAVPTDRLNAVYADRA
                     FLSAKVRSFIDFLNEKIASRKGCRNAV"
     gene            46259..46657
                     /locus_tag="ACFJAG_000140"
     CDS             46259..46657
                     /locus_tag="ACFJAG_000140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HFC3979553.1"
                     /translation="MSDCCNRIQPVLLSVLRIVTAYLFLLHGTSKIFAFPIEMGSGSP
                     GGLLLLAGILEIVGGILLVLGLFARPAAFVLSGQMAVAYFMAHASGNALFPIANGGES
                     AVLFCFVFLYIAAAGGGAWSLDRLFFKRKA"
     gene            46706..>46882
                     /locus_tag="ACFJAG_000141"
     CDS             46706..>46882
                     /locus_tag="ACFJAG_000141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HFC3979554.1"
                     /translation="MSRQSLQQAAESRRSVYSLNKNLPVGKDEIVQIVEHAVLHTPFS
                     FNSQSARVVVLFGEE"
BASE COUNT         9993 a        12356 c        13598 g        10935 t
ORIGIN      
        1 ataataaatg agttatagtt ttagttggtt ttatattggt taaaagcaaa atgctaaaaa
       61 tttaactttg ccgtcattcc cgcacaggcg ggaatccata gtggaattta cagaacccga
      121 tatttgaaaa gcagttgccg aaattcaaaa aatggattcc cgcctgtgcg ggaatgacgg
      181 caaggtggca gtaaacgttt taaacagtat tgattgtcaa tgaaactcaa aaggccgtct
      241 gaagcccatt tttcagacga tctccataaa aaattattta tcaaataccc gtaactagga
      301 acgaaccatg ttacaaatcg aaatcgacgg caaacaggta tctgtggagc agggcgcgac
      361 ggtaattgaa gccgcgcaca agctcggtac ttatattccg catttctgtt accacaaaaa
      421 gctctctatt gccgccaact gccgtatgtg tctggtggat gtggaaaaag cccccaaacc
      481 gctgcctgcc tgtgccacgc cggtaacgga cggcatgatt gtgcgtacgc attcggcaaa
      541 agcccgagag gcgcaagaag gcgtgatgga gttcctgctc atcaaccatc cgcttgattg
      601 tccgacctgc gaccagggcg gcgaatgcca gttgcaggat ttggcggtgg gctacggcaa
      661 aaccaccagc cgttataccg aagaaaaacg ttccgtcgtc ggcaaggaca tgggtccttt
      721 ggtttccgcc gaggaaatga gccgctgtat ccactgtacc cgctgcgtac gtttcaccga
      781 agaaatcgcc ggtttgcagg aaattacgat ggtgaatcgt ggtgaacact ccgaaatcat
      841 gccctttatc ggcaaagcgg tggaaaccga gctgtcgggc aacgtcatcg atttgtgtcc
      901 cgtcggcgca ttgaccagca aaccgttccg cttcaacgcg cgtacttggg aattgaaccg
      961 ccgcaaatcc gtttccgcac acgacgcttt gggcagcaac ctgattgtac aaaccaaaga
     1021 ccataccgtc cgccgcgtgt tgccgttgga aaacgaagcc atcaacgaat gctggctgtc
     1081 cgaccgcgac cgttttgcct acgaaggcct gtatcacgaa agccgtctga aaaatccgaa
     1141 aatcaaacag ggcggcgagt ggatggacgt ggattggaaa accgcgttgg aatatgtccg
     1201 cagcgcgatt gaatgtatcg ccaaagacgg caaccaaaac caagtcggcg tttgggctaa
     1261 tccgatgaat acggttgaag agctgtatct ggccaaaaaa tttgccgacg gcttgggtgt
     1321 taaaaacttt gcaacccgtt tgcgccaaca agacaaacgt ctttcagacg gccttaaagg
     1381 tgcgcaatgg ttgggacaaa gtattgaatc tttggctgac aacgatgccg tattggtagt
     1441 cggtgcgaac ttgcgcaaag aacagccgct cctgaccgcc cgcctgcgcc gcgccgccaa
     1501 agaccgtatg gccttgagcg tattggccgg cagtaaagaa gaattgttta tgccgcttct
     1561 gtctcaagaa gccgcacatc ccgacgagtg ggcaggccgt ctgaaaaacc tgtctgccga
     1621 tgcggaacat gccgttaccg ccagcctgaa aaacgctgaa aaagcagcgg tgattttggg
     1681 tgcggaagtg caaaaccatc ctgattacgc cgccatttat gccgccgcgc aagagctggc
     1741 ggacgcgacc ggcgcagtgc tgggcatttt gccgcaagcc gccaacagcg tcggtgcgga
     1801 cgtattgggt gtgaactcgg gcgagagcgt tgccgaaatg gcaaacacgc cgaaacaggc
     1861 agtcttgctg ctcaacgtcg agcctgaaat cgatacggtt gacggtgcaa aagccgtagc
     1921 cgcgttgaaa caggcgaaaa gcgtgatggc gtttacgccg tttgtcagcg aaacgctgct
     1981 ggacgtgtgc gacgtattgt tgccgattgc gccgtttacc gaaacatcag gcagctttat
     2041 caatatggaa ggccgtctgc aatctttcca cggcgtggta caaggcttcg gcgattcgcg
     2101 tccgatgtgg aaagtgttgc gcgtattggg caacctgttt gacctgaaag gttttgaata
     2161 ccacgatacc gctgcgattc tgaaagacgc gctggatgcg gaaagcctgc cgtccaaact
     2221 ggacaaccgc agcacatggg caggggaggg cgttcagacg gcctcaaacc gcctcgtccg
     2281 tgtcggcggc gtcggtattt atcatactga ttctatcgtg cgccgttccg caccgttgca
     2341 agaaaccagc catgccgccg tgcctgccgc gcgtgtgaat ccgaacacat tggcacgctt
     2401 gggcctgcaa gacggacaaa ccgctgtcgc caaacaaaac ggtgcaagcg tatcggttgc
     2461 cgtcaaagcc gatgccggtt tgcctgaaaa cgtggtgcat ctgccgctgc ataccgaaaa
     2521 tgccgcgctg ggtgcgttga tgggcattat tgaactggcg ggagcttgat tatgcaggaa
     2581 tggttccaaa acctctttgc cgcaacgctc ggtctgggcg atttgggcat caccgtaggc
     2641 ttggtggtat ccgtcatcgt caaaatcgtg attatcctga ttccgctgat tctgaccgtt
     2701 gcctacctga cgtatttcga acgtaaagtc atcggcttta tgcagcttcg cgtcggcccg
     2761 aacgtaaccg gcccgcgggg tctgattcag ccgtttgccg acgtgttcaa actcttgttt
     2821 aaagaggtaa cccgtccgaa gctgtcaaac aaagccttat tctacatcgg cccgattatg
     2881 tcgctcgccc cgtctttcgc ggcgtgggcg gtgattccgt ttaacgaaga atgggtgctg
     2941 accaatatca atatcggcct tttgtacatc ctgatgatta cctcgctgtc ggtttacggc
     3001 gtgattatcg cgggctgggc ttccaactcc aaatattcgt tcttgggtgc aatgcgtgct
     3061 tccgcgcaaa gcatttccta cgagattgcc atgagtgccg cgctggtgtg cgttgtgatg
     3121 gtatcgggca gcatgaactt ctccgacatc gttgccgcgc aggcaaaagg catcgcgggc
     3181 ggttctgtgt tctcgtggaa ctggctgccg ctgttcccaa tcttcatcgt ctatctgatt
     3241 tccgccgttg ccgaaaccaa ccgcgcaccg tttgacgtgg cagagggcga gtctgaaatc
     3301 gttgccggac accacgtcga atactccggc tttgcattcg cgctgttctt ccttgccgaa
     3361 tacattttca tgattctgat tgccgcgctg acatcgctga tgttcctcgg cggctggttg
     3421 tctccgttcc cgcaaagctg gggcattgtc ggtacgcctt ccgcattctg gatgttcgtg
     3481 aaaatggcgg cggtgctgta ctggtatctg tggattcgtg caaccttccc acgctaccgc
     3541 tacgaccaaa tcatgcgttt gggctggaaa gtgctgattc cgatcggctt cgcctacatc
     3601 gtggttttgg gcgtgtggat gatttcaccg ctgaatttgt ggaaataagt ttcagacggc
     3661 atcttgaggc cgtctgaaca aagcgatttt gaatacctaa cgaaatccct gttttgaggg
     3721 aacataatat ggctaactta gtaaaaacct ttctgcttgg cgaactggtc aaaggcatgg
     3781 gcgtaacgct caaaaacttt tttgcccgca aagacacaat ttattttccc gaagagaaaa
     3841 cgccgcaatc cgtgcgtttc cgcggtctgc acgcgcaacg ccgttatccg aacggagagg
     3901 aacgctgcat cgcgtgtaaa ttgtgcgagg cggtgtgtcc ggcaatggcg atcaacatcg
     3961 aatcggaaga acgcgaagac ggcacccgcc gcaccaagcg ttacgacatc gacctgacca
     4021 agtgcatctt ctgcggtttc tgcgaagagg cctgcccgac cgatgcgatt gtggaaaccc
     4081 atatttttga ataccacggc gagaaaaaag gcgacttgca tatgaccaag cccatcctct
     4141 tggcaatcgg cgacaaatac gaagccgaaa tcgccaaacg caaagccgct gacgcgccgt
     4201 accgctaagg agcagacgaa tgactttttc cgtgattctg ttctatatcc ttgccgccat
     4261 cgttttgtac ggtgcggttc gtaccgttac cgccaaaaac cctgtccatg ccgctttgca
     4321 tctggtgctg accttctgcg tgagcgcgat gatttggatg ctgatgcagg cggagttttt
     4381 gggcgtgacg ctggtggtgg tttacgtcgg cgccgtaatg gtgttgttcc tgttcgtcgt
     4441 gatgatgctg aatatcgaca tcgaggaaat gcgcgccggt ttctggcggc acgcgcctgt
     4501 tgccggtgtg gtcggtacgt tgttggcggt tgccctgatc ctgattctgg tcaacccgaa
     4561 aaccgacctg gccgcatttg gtctgatgaa agacattccg gccgattaca acaatatccg
     4621 cgatttgggc agccgtattt ataccgacta cctgttgccg tttgaattgg cggcggtatt
     4681 gctgctgttg ggcatggtgg ccgcgattgc attggttcac cgcaaaacca ccaatccgaa
     4741 acgtatggat ccagccgacc aagttaaagt acgcgccgat caaggccgta tgcgtctggt
     4801 gaaaatggaa gcggtcaaac cgcaagtcga atctgccgaa gaaagcgaag tttcagacgg
     4861 cctcaagacg gaaggggagg gcaaagcatg attactttga cgcattatct ggtattgggc
     4921 gctctcctgt tcggtatcag cgcgatgggc atctttatga accgcaaaaa cgtgctggta
     4981 ttgctgatgt ccatcgagct gatgcttttg gcggtgaact tcaactttat cgccttctcg
     5041 caacatttgg gcgatactgc cggacaaatt ttcgtattct tcgtattgac cgttgccgct
     5101 gccgaatccg ccatcggttt ggcgattatg gtgctggtgt accgcaaccg acaaacgatt
     5161 aatgttgccg atttggacga gttgaaaggg taattatgaa cgatatgact ttatatttga
     5221 taattgccct tgttccgttg gcaggctcgt tgattgcggg tttgttcggc aacaaaatcg
     5281 ggcgtgccgg cgcgcatacg gttacgatac tcggtgtcgc tgtatctgcc gtgctgtcgg
     5341 cttatgtgct gtggggattc ctcaatggca gccgtgccaa gtttgatgaa aacgtctata
     5401 cctggctgac aatgggcggt ttggatttct ccgtcggctt cttggtcgat acgatgacgg
     5461 cgatgatgat ggtcgtggta acgggcgtgt cgttgatggt gcatatctat accatcggtt
     5521 atatgcacga tgaaaaagtc ggctaccaac gcttcttcag ctatatttct ttgtttactt
     5581 tcagcatgtt gatgctgatt atgagcaaca acttcatcca gctcttcttc ggttgggaag
     5641 cggtgggctt ggtgtcgtat ctcttgatcg gtttctattt caaacgcccg ggcgcgacat
     5701 ttgccaacct gaaagccttt ttgatcaacc gtgtcggcga cttcggcttt ttgctcggta
     5761 tcggcttggt gcttgcctat ttcggcggca gcctgcgtta tcaggacgta ttcgcctatc
     5821 tgcccaacgt acaaaatgcc actatccagc ttttccccgg cgtggaatgg tctttgatta
     5881 ccgtaacctg tttgctcctg tttgtcggtg cgatgggtaa atcggcacaa ttcccgctgc
     5941 acgtctggct gcctgattcg atggaaggcc cgactccgat ttctgcattg attcacgccg
     6001 cgacgatggt taccgccggt ttgtttatgg tgtcgcgtat gtcgccgatt tatgagatga
     6061 gcagcaccgc gctgtcggtc attatggtaa tcggcgcgat taccgccctg tttatgggct
     6121 tcttgggtgt gattcaaaac gacatcaaac gtgtggttgc gtattctacc ctgtcgcaac
     6181 tgggctacat gaccgtggct ctgggcgcgt ccgcctattc tgtggcgatg ttccacgtca
     6241 tgacccacgc cttctttaaa gccttgctgt tcttggcggc gggcagtgcg attatcggta
     6301 tgcaccacga tcaagatatg cgccatatgg gcaacctgaa aaaatacatg ccgattactt
     6361 ggctgactat gctgatcggc aatttgtctc tgatcggtac gccgttcttc tccggcttct
     6421 actccaaaga ttcgattatc gaagcagtga aatacagcac cctgccgggc agcggcgttg
     6481 cctattttgc cgtcctcgcc agcgtgttcg ttaccgcgtt ttacgcgttc cgccaatact
     6541 ttatggtgtt ccacggcgaa gaaaaatggc gcagtctgcc cgaacaccat tcagacggcc
     6601 atggtgaaga acatcacggc ttgggcaaaa acgacaatcc gcacgaaagc ccgctggtcg
     6661 ttaccctgcc gctgattctg cttgcgattc cgtccgtcat catcggctac atcgccatcg
     6721 aacccatgct ctacggcgat ttcttcaaag acgtgatttt cgtcaacgcc gacgcgcatc
     6781 cgaccatgca catcatgaaa gaagagttcc acggcgcatt ggcgatggtg tcgcacagtc
     6841 tgcattcgcc cgtcctctat ctcgctaccg caggcgtatt gagcgcatgg cttttgtacg
     6901 tcaaactgcc gcacctgccc gctaaaatcg cgcaggcgtt ccgtccggtt tacgttttgt
     6961 ttgaaaacaa atactacctc gacgccttgt atttcaacgt cttcgccaaa ggcacgcgcg
     7021 cattgggaaa cttcttctgg aaagtcggcg ataccgccat tatcgacaac ggcatcgtca
     7081 acggctccgc caaactggtc ggcgcaattg ccgcgcaagt gcgtaaagtc caaaccggct
     7141 ttatctacac ctacgccgcc gctatggtgt tcggcgtatt ggtattgctc ggcatgacct
     7201 tctggggctt gttcagataa aggcggagtt tcagacgacc tgttcatagt tttgtagagg
     7261 tcgtctgaaa agtttgagaa gtgggcatta agtcaaaggg tggaacaaaa tggtacccaa
     7321 caggcgtgaa atagccaaca tgcaaattat ctgtttccta aattttttag gcaatctcaa
     7381 caaatataga ggagtcaaaa gggatgacac agttattttt acattcagat acaccaaatg
     7441 agaaggaact gatttcaata tatgagaaag ctgtttcaga ggcagtagag ctgtatattt
     7501 tctctgcgta tctcactcat tgggatgtaa aaaataagct caatagcaaa ttgcaagagt
     7561 ttaaatttat ttttggacaa gatttcggat tgtctaaaaa agaggctatt cggaaagtgt
     7621 tgaaatggct tccgtcccat ttgaaattca cactgatggt agctcaaggc attcagggtt
     7681 ttcatcctaa agctgtattt tggaagaatg ataagaatga atattatgct ttaatcggtt
     7741 cttcaaattt gactcatgct gcgtttaata gcaattatga agcaaatatt ttgactaaaa
     7801 tttccgagca ggattttata aaagtcaaat cttgggctga tgaaattgcg atgaaatcta
     7861 tcccggtatc ggaagattgg cttgaggagt atcaggaagc tgaaattaac tataagaaat
     7921 caactgttag acaatcagtg atggataagt tatttatgga gatgccaaat tataatcaag
     7981 aactgattgc ggcacggaga aagcagatga gaaaccatca aactgtgtgt aatcaattaa
     8041 aaaatcttat taagcaatgt gcagcaggaa aaatagacaa taatgatttt tatggggaat
     8101 ttaataaatt atggtcttgg aaaagcgaaa ataaaggaga aggggtaggc aatcgttttc
     8161 aagataaaac gtggaaaagg acgggtaagt cttcagattt tagaaaatta tgcattgcca
     8221 tccaatcagt ttttgatgct ccacttactg agagagataa tgtggttgcc aagcaaattg
     8281 attggctaaa agaatgtggg gtttccactc gtggttcagt tttttctgaa atgctttgtc
     8341 aagaatatcc agatagatat cctgttttaa atgctcccat taaaaaattt ttagaagaaa
     8401 ataaatttaa gtctgcaaaa ggagcaagcg aaggctccaa atatattgat ttaagtatga
     8461 agttaagagc tttactagct atgcagtcag aaataaaaga tttggctgaa ttagatgttt
     8521 tagtacaggc agaatatcgc aatcgtacag atattgattg ggaataagta aagaaggggg
     8581 gagagtattc attccttctt tcagacgact tcctaaaacg ctgtctgtaa agaccaaccc
     8641 atacaactat attttttatt ttaaccacag gttaaccact atgttttcca actacctact
     8701 cagcttggca atatggatac ccatcgccgc aggcgtgctg gttttggcga ccggtaaaga
     8761 cagccgtgcg ccgctggcgc gtgtgcttgc cttcatggga gcgcttgccg gtttcttggt
     8821 aacgctgccc ctgtttaccg gtttcgaccg tttgagcggc ggctatcaat ttaccgagtt
     8881 ccacgagtgg attccgcttc tgaaaatcaa ctacgcattg ggcgtggacg gtatttcagt
     8941 gctctttatc atcttgaatg cgtttattac gctgctggtg gtattggccg gttgggaagt
     9001 cattcagaaa cgtccggcgc agtatatggc ggcattcctg atgatgtcgg gtttgattaa
     9061 cggcgcgttt gccgcgcagg atgcgattct gttttatgtg ttcttcgagg gtatgctgat
     9121 tccgctgtac ctgattatcg gtgtatgggg cggcccgcgc cgcgtctatg cgtcggtcaa
     9181 gctgttcctc tatacgctga cgggttcgct cttgatgttg gttgccatgg tttacctgta
     9241 ctatcagaca ggcagcttct ctattgtcga tttccaaaac atcaaacaga ttccgttggg
     9301 cgtacaacag cttttgtttg tagcgttctt cctgtcattt gccgtaaaag tgccgatgtt
     9361 ccccgtacac acttggctgc cggatgccca cgttgaagcg ccgaccggcg gttcgatggt
     9421 gttggcggca attacgctga aactgggtgc gtatggtttc ttgcgcttta tcctgccgat
     9481 tatgccggac gcggctcgct attttgcccc cgtaatcatc gtattgagcc tgattgccgt
     9541 aatttatatc ggtatggtgg ccctggtgca aaccgatatg aagaaactgg tggcgtattc
     9601 gtccatcagc catatgggtt ttgtaacgct tgggatgttt ttgtttgttg acgggcagtt
     9661 ggacgactgg gcgttgaaag gcgcggtcat tcagatgatt tcgcacggct tcgtgtcggc
     9721 ggcgatgttt atgtgcatcg gtgtgatgta cgaccgcctg cacacgcgca atattgccga
     9781 ttacggcggc gtggtcaatg tgatgcccaa gtttgcggcg tttatgatgt tgttcggtat
     9841 ggcgaacgcc ggcctgcctg cgacttccgg cttcgtgggc gagtttatgg tggttatggg
     9901 cgcggtcaaa gtgaatttct gggtgggcgc gctggcggct atgacgttga tttacggcgc
     9961 gtcttatacc ctgtggatgt acaagcgcgt gattttcggc gcgattcaca atccgcacgt
    10021 tgccgaaatg aaagacatca attgccgcga gtttgcgatt ctggcggttt tggcggttgc
    10081 tgttttgggg atgggcctgt atccgaacgc atttatcgaa gtggtgcatc aggcggcaaa
    10141 cgatttgatt gcccatgtgg cgcaaagcaa gatttgaggt gtgtaaatga attggtcaga
    10201 tttgaattta atgcccgcac tgcccgaagt cgcgctgctg tcgctgctgg tgttattgtt
    10261 gccggcggac ttgtgggcca gtgatgacaa atgccgttgg acgcattacg gcgcgttggc
    10321 aacggtggcg gttacggcgg cggtgcagct tgccgtgtgg gaacagggca gcacgtcttc
    10381 gttcaacggg atgtatattg cggacggtat gtcgcgtttg gcaaaaatgg ttttatatgc
    10441 cttgacgttt gtcctgtttg tctatgccaa gccctacaac caagtgcgcg gtattttcaa
    10501 aggcgagttt tacaccctgt cgctgtttgc cctcttgggc atgagcgtga tggtgagcgc
    10561 ggggcatttt ttaactgcct atatcggttt ggaactcttg tcgctcgccc tttacgccct
    10621 gattgccctg cgccgcgatt ccggttttgc cgccgaagcc gccttgaaat attttgttct
    10681 gggcgcgctg gcatccggcc tgctgctcta cggtatttct atggtttacg gcgcaaccgg
    10741 ttcgctggaa tttgccggcg tgctcgcctc ttccttcaat gaagaagcta acgaatggct
    10801 gttgaaactg ggtctggtgt ttatcgtcgt cgccgttgcg ttcaaactcg gcgcggtacc
    10861 gttccatatg tggatgcccg acgtgtatca cggcgcgccc acttctgtta ccgccttggt
    10921 cggcactgcc ccgaaaatcg ccgccgtcgt tttcgctttc cgcatcctcg ttaccgggct
    10981 gggaaccgtg catcatgact ggtctctgat gtttgccctg cttgccgccg cctcgctgct
    11041 ggtcggcaac cttgccgcca tcatgcagac caatatcaaa cgtatgctcg cctattccac
    11101 cgtatcgcat atgggtttca tcctgttggc gtttatggcg ggcgcggtcg gctttgcggc
    11161 gggcctctat tacgccatta cctacgcgct gatggcggcg gcagggttcg gcgtgttgat
    11221 ggtgttgtcg gacggggaca acgagtgcga aaacatcagc gatttggcag ggttgaacca
    11281 acaccgcgta tggcttgcct ttttgatgct gctggttatg ttctctatgg cgggcattcc
    11341 gccgctgatg ggtttttacg ccaaattcgg cgttattatg gcacttttga aacaaggcta
    11401 tgtatggttg tcggtgtttg ccgtcgtgat gtcgctggtt ggcgcgttct actacctgcg
    11461 cgtggtcaaa gtcatgtatt ttgacgaatc cggccgcgcc cgtcccgccg ccggcggcaa
    11521 caatgccgca aaatccctct taagcgtcaa cgcgctgctg ttggtgctgt ggggcattat
    11581 gccgcaaacc gttatcgact ggtgcgccaa ggcgttggag aacacgctgt gagccgccgc
    11641 aacggcagcc gtgtcagagg ctgccgtttt tgttaagata tgccgttccg caatgcagtt
    11701 cagacggcat cgccgccgac aatgcccaaa cagaaagccc atcatgaccg catccatgta
    11761 catccttttg gtcttggcac tcatctttgc caacgccccc ttcctcacga ccagactgtt
    11821 cggcgtggcc gcgctcaagc gcaaacattt cggacaccac ctgatcgagc tggcggcagg
    11881 tttcgcgctg accgcctctc ttgcctacat cctcgaatcc cgtgcgggag cggtacacaa
    11941 tcagggttgg gagttttacg ccaccgtcgt ctgcctgtac ctcattttcg ccttcccgtg
    12001 tttcgtgcgg cggtattttt ggcacacgcg caacagggaa taaacaagca aacaagcata
    12061 ggaatgccgt ctgaaaccct ttcagacggc atttgtttca ttcaagtgca ggccggcatc
    12121 gctgtgccgg cacgtttcag tcggcgatat acgccggttt taatatttgc gtgcgactgc
    12181 aaattctgcc aactgccgca ggcgcagggc tttgtcgccg aagggttcga gcagcgcgac
    12241 tgcttcggca accagtttgt gtgcgtatga gcgcgccgct tccaagccca tcagtttcac
    12301 ataagtcggc ttgtcgttgt cggcatcttt gcccgccgtc ttgcccaaag tcgccgtgtc
    12361 cgcttcacaa tccaacacat cgtcgatgac ttggaacgcc aaacccagtt ttgccgcgta
    12421 agcgtccaat acggcaagtt ccgcgtcgga cagatcggga cacgccgtcg cccccaataa
    12481 aaccgccgca cggatcaacg cccccgtttt caggctgtgc atccgttcca aatcggcttg
    12541 aaccatttgt ttgccgacat ttgccaaatc gattgcctgt ccgcccgcca tacccgcgct
    12601 gccgcccgct tttgccaaca ccgacaacat tgccaactgg cgtgcggcgg gcagttctgt
    12661 cggacggctc aacacgtcga aggcttgggt ttgtaaagcg tcgccggtca gaagggcggt
    12721 ggcttcgcca tatttgatgt ggcaggtcgg tttgccgcgc cgcaggctgt cgttgtccat
    12781 cgccggcata tcgtcgtgaa ccaaagaata gacgtggatc atttcgattg ccgccattgc
    12841 ctgtccgacc gcatccgcca cggccccgcc caattccgaa gccgccagca ccagcatcgg
    12901 gcgcagacgc ttgccgccgt ccaaagccgc atagcgcatc gcttcgtgca gcgtgtgcgg
    12961 gatttcgttt ccagacggca aaaagcgttc cagcagcagc tctgtctgcg cctgcgccct
    13021 ctgttgccac gctttcaaat cattcgtcgg attcaaggtt caactccttc gtcccgtccg
    13081 catccaaaac ctgtaatttt tgttcgactt ggaccagctt ggtttggcag tacctgacca
    13141 gctcgttgcc ttcctgatag gcggcaagcg cgtcttccaa gggcatttcg ccctgcatgg
    13201 actgcgtcag cgattcaagg cgcgacaagg cctcttcaaa cgatttcggg gtgtttttct
    13261 tcatagtttc gggtgttccg gtaaaaagcg gattgtagca tttttgcaaa acggatgccg
    13321 tctgaaaccc gaatccggct tcagacggca ttttttccgc cccggtcggc aaggcgttac
    13381 ccgagcagtt cgtcggtgat gccctgcaaa aaggcgaggc gttcggggct tgccgccccg
    13441 gtttcggcag cggctttgaa ggcgcagccg ggttcggcgc ggtgggtgca gttgtggaag
    13501 cggcattgcc cgacaaggtg gcggaaatcg gggaaatagt gcggcaaatc ggcggcttgg
    13561 aggtggtgta aaccaaattc ttgcaaaccc ggggagtcga tgagttgggt ttcgccgttc
    13621 aaatcataaa gccgggcgtg ggtggtggtg tgttttcccg agtcgagtgc ggcggaaatg
    13681 tcgccggtgc gggcggtttg gctgcctaaa agggcgttgg tcagggtgga tttgcccata
    13741 ccgctttgtc cgagcaggat gttgctgtgc ccttgcagga cggggcgcag gctgtcggcg
    13801 ttttccagca cgcgggtttc gatgacgggg taacccagcg tttcgtagaa tttgagtttt
    13861 tcgagccaga gggcggtttc gggcaggtcg gctttgttca ggacgatgac ggcgcggatg
    13921 ccggcggctt cggcggcaag cagggcgcgc tgtagcagcc gcacgctcgg actcgggacg
    13981 gcggcggtta cgatgaggag ttgggtaacg ttggcggcga tgagtttggt tttccacgcg
    14041 tcttggcggt agagcaggct ttggcgcggt aaaaaatctt caatcacaac ttgttcggcg
    14101 ttgacggggc tgatgcggac gcggtcgccg caggcgaaat cgacgcgttt tttgcgggtg
    14161 ctggcttcgt aggttgtgcc gtcgggcgtg cggacgatgt agcggcggcc gtagccggcg
    14221 gtaatttggg cggtgtcgtt catggtttct ttggggttgg gtgtggaaat gccgtctgaa
    14281 aaggggtgtt cggacggcat cggttcagtc gtgctgccac tcgacgtgtt cgctgaggaa
    14341 gccgccgctc tggtgcgccc agagtttggc gtaaagcccg cgtttttcga ggagttcggc
    14401 gtgtgtgcct tcttcgatga tgcggccttt gtcgaggacg acgagcctgt ccatcgcggc
    14461 aatggtggag aggcggtggg cgatggcgat gacggttttg ccttccatca ttttgtcgag
    14521 gctttcttgg atggcggctt caacttcgga atcgagcgcg ctggtggctt cgtcaagcag
    14581 caggatgggt gcgtctttga gcatcacgcg ggcgatggcg atgcgctggc gttgtccgcc
    14641 ggagagtttc acgccgcgtt cgccgacgtg cgcgtcgtag ccgctccgcc ctttggcatc
    14701 ggaaaggtcg gggatgaagc cggcggcttc ggcgcgttcg gcggcggaaa ccatttcggc
    14761 atcggtcgcg tcggggcggc cgtaaataat gttgtcgcgc acggaacggt gcagcagcga
    14821 ggtatcttgt gtgaccaaac cgatttgggc gcgtaaagat tcttgggtaa cgccgcttat
    14881 gtcctgcccg tcgatcgaaa ccgtgccgct ttgcggttcg tagaaacgca aaagcaggtt
    14941 gacgatggtg gatttgcccg cgccgctgcg tccgatcaag ccgacttttt cgccgggttt
    15001 gatattcagg ttaaagccgt tgagcagcgg tttgccggct tcgtagcaaa aatcgacgtg
    15061 ttcgaacttg attgcgcctt gcggcacgtt cagcggcagg gcttggggct tgtcgaggat
    15121 ggtgtgcggt ttggacaggg tcgccatgcc gtcgttgacg atgccgatgt tttcaaacag
    15181 ccgcgcggat tcccacataa tgtattgcga cagcccgttg acgcgcaacg ccatcgcggt
    15241 ggcggtggcg accgcaccca cgccgacctg tccgttgtgc caaagccaga tgcccagtgc
    15301 ggcggcggag agggtcagcg aagtgttgac gatgaagctg cacgaatgca gcagagtcgc
    15361 cagccgcatt tgggcgcgca ccgtaaccat aaattcttcc atcgactgct tggcatagac
    15421 ggcttcgcgc gcgccgtgga aaaagagttt gacggtggcg atattggaat aggcatcggt
    15481 aatgcggccg gtcatcagcg agcgggcatt cgcctgccgt gcggcggttt gccccaatct
    15541 gggaatcagc aggcgcatta ccgaagcgaa accgattatc cagccgataa agggcagcag
    15601 cagccatgag tcgagcgagg cgagaatcac gcccgaagtg atgaaataca ccgacacata
    15661 aacgaccata tcggcaaccg tcatcaccgc gtcgcgcaac gccagcgcgg tctgcatgac
    15721 tttggcggac acgcggccgg caaattcgtc ctgataaaaa ccgaggctct ggttcagcat
    15781 caggcggtgg aagttccagc gcaggcgcat agggaacacg ccctgaaggg tttgcaggcg
    15841 cacgttggac gcggcaaacg cccacacgac cgaaaacacc atcatcgccg ccattgccgc
    15901 cagttcccaa cctttttcgg caaacagttc ggcgggcgcg tatttgccga gccactctac
    15961 gattttgccc ataaattgaa aaatcagggc ttccataatg ccgatgccgg cggtcagcgc
    16021 agctagggcg gctatccatt tccgcacccc gtccatactg ctccagacaa accggcacaa
    16081 gcctttttcg ggcgttttcg gcgcggcttc ggggtagggg tcgattcggg actcgaacca
    16141 ggaaaatatt ttgttcaaca ttgttttcga tttcggtaaa acagtttcag acggcatcaa
    16201 acacaatgcc gtccgaaagg agggacaata acgccatttt acgggaaaag ccgtcgggaa
    16261 gacagcgcgg ggcggaaacg cagggtttcg tcagggcaaa cgccgcgccg ccttcggacg
    16321 gcattatttc agcaggtttt tcagggcaag gcgcacgcct tcgcccacgt ccgtcccctt
    16381 cggaacgcct ttgaccgccg cttttgcctc gcgttcgttg taacccagcg caagcagcgt
    16441 gctgacgatg tcttccgttt cgtcggcggc gggtgaggcg gcaaacagcc tgtccgttac
    16501 cgtatgcgcg accagcttgc cgcgcagttc caagaccata cgttcggcgg tttttttgcc
    16561 gattcccgga gcggaggaga ggcgtttgac atcttcttct gcaaccgccc gcgccagctc
    16621 gtctgccgtc atcgccgaca aaatgcccaa agccgttttc gcgccgatgc cgccgacctt
    16681 aatcagttgg cggaaggtct tgcgttcttc cgcagtggca aaaccaaata aaagatgtgc
    16741 gtcttcccga atgataagct gggtaaacag ttgtacgctt tcacccacag gcggcaggtt
    16801 gtagaaggtc tgcatcgata cgtcggcttc ataaccgaca ccgttgacat cgatgacgat
    16861 ttgcggaggg tttttttcaa ccagtttgcc ggtcagtctg ctgatcatgt gtgccgaatc
    16921 ctgaagtgtc gggtgcaaaa tgccgtctga aaccggttcg ggctccagac ggcacggatt
    16981 gtatcaaatt cagtcgtcgc ggcgggagga aatcacgcgg ccggtacggg catcgacaac
    17041 gactttgtat tcctgtccgt ttttgacgat ttcgacatca tagtgcggac ggccgtcgtc
    17101 gtgttcgaga tcgatgtcgg tgattttgcc gccgacacgc gcccaagccg ctttttcggc
    17161 ttgggcgcgg ctgatgattt tgtcttgttt gccgtgttgg tgtgcggcgt gtccgtggtc
    17221 gtcatcgccg tgtccgtcgt ggtgggcgag tgcgggggcg gaaatgccca acagtgcggt
    17281 tgcggcggcg gtcaagagaa ggtgtttgat gttcatattt gcccttgtaa atcaggggtt
    17341 gaaaaatggg gatattaata aggtatcgaa taaccgtcaa ccggaggtca gtaccgcccg
    17401 aaccataccg cgtgcctgcg cttcggcttc ggcggcgcgt tcctgcgagg caaacgggcc
    17461 cattttgaca acgtattcgt aacggcgttt ttcaaccgag aggttcgggc ttgatgacga
    17521 agcggcgaaa ttttgggcgg cttggttcag ataggcttgt gcttcgtgtt ccgtaccgaa
    17581 agatttcaag tcgataaaga tgtctttgtt ttcggcaacc ggtgcggatt ggcccgggac
    17641 gatttgttcg attttgacgt gtgccgtccc ttggctgaca aagcccaatt tttgcgcggc
    17701 ggctttggat acgtcgatga tgcggttgcc gtggaagggg ccgcggtcgt tgacgcggac
    17761 gatgacgctt ttgccgtttt tggtgttggt tacgcgcaca tggctgggga tgggcagggt
    17821 tttgtgggcg gcggtaaagg cgttcatatc gtagcggtct ccgccggaag ttttgcgccc
    17881 gtgaaacctg ccgccgtacc acgaggcgtt gccggtttgc gtgaattcgg cgactttgta
    17941 gctgcggttg gcggaggcgt gcagtttttc cgccttgacc actgcgtcgg cggatgccgt
    18001 ctgaagggag tgtgtgccga acgcggcggt gaggaggaaa agggtttttc gggttaaagt
    18061 caaaatgtgt tccgttcttg agttgaagac gaatgggcat tatgccctac ggacgcgttc
    18121 cgaaccgccg cacgctgcgg cagcggttcg gaatgtgtcc gaacggtttt cagacggcat
    18181 gaacctgcgt tcaaacgccg cctgcgtaac cgtgttgccg ccacgcttca aagagaatca
    18241 cggagacggt gttggaaagg ttcatactcc ggctgccggg ccgcatcggc aggcggattt
    18301 tttgcgcggc gggcaggctg tcgaggatgt cggcaggcag cccgcgcgtt tccggcccga
    18361 acagtaaaac gtcgcctttt tgaaacgcgg tttcatcggg gcgcgccgtg cctttggtgg
    18421 tcagggcgaa aatacgtcgg cctgccagcg acttgaggca gtcgtcgaag ttttcgtgca
    18481 ccgtcaggct ggcgaattcg tggtagtcga gcccggcgcg tttcattttg gcggaatcca
    18541 atgggaagcc gagcggtttg acaaggtgca aatccgcgcc ggtattggcg cacaggcgga
    18601 tgatgttgcc cgtgttcggg gggatttccg gctgatataa aacgatggta agcataaata
    18661 tcaatcactt ataggcgcgt aaccttgcca taaggcggat ggggtgtcaa aaaatttagt
    18721 tattttttca ttggcgtgcg tgccagcgtc cagcagcaga ttcggtttgc gcccgatttt
    18781 ttcagcgtct ttgccaattc gtccagcgtc gcgccggtgg taaagacatc gtcgattaac
    18841 aaaatattac agttttccgg tatcggtgtg cggatttcaa aggcgttttt gatgtttcgc
    18901 cgccgttcgc cgcctttgag cgtgctttgc ggcgggcggt ggtgtcggaa tacggtgtgt
    18961 cggggcagta tctgccagcc gtagcgttgc gccaacaacc cgacgatgct ctcgctttgg
    19021 ttgaacccgc gttgcagcag ccgctccctg cttagcggaa cgggtaggac gaaatcgaaa
    19081 cattcgtctg aaagccggtc gggcggattc tgcatcgtca ggtctgccag cggctgcgcc
    19141 atgcccaaat cagccaagtg cttcagcgcg cgtatcatat tgctgacggg cggttcgtaa
    19201 tgcagcgatg cccacatccg gtcgaatgcg ggcggttttt tctgacatcc gccgcacacc
    19261 gcgccgcctt gaacgtgcct gaaacacagg gggcagctgt ttgccgcgtc ggtgcggtat
    19321 gccgccaaat cggtattgca gccggcgcag atgccgtctg aaacgccgga cgaaccgtgg
    19381 cataatacgc aacgcctgat agtgggcgcg tctgcgatgc gccgccaaca agagagaaaa
    19441 ttcatgcctg atgctgccaa aaaagtttac ctgatacacg gttggggggc gaaccgccac
    19501 gcgttcgacg atttgatgcc gcgcctgccc gcaacgtggc cggtgtccgc cgtcgatttg
    19561 cccggacacg gggacgcgcc cttcgcgcaa cccttcgata ttgaggcagc tgccgacggc
    19621 attgccgctc aaatcgatac gtcggccgac attctcggct ggtcactcgg cggattggtc
    19681 gcgctgtatc tggcggcgcg ccatcccgac aaagtccgtt cgctctgcct gacggcgagt
    19741 ttcgcacggc tgacggctgc cgaagactat cccgaagggc ttgccgcgcc tgcactgggc
    19801 aaaatggtcg gcgcgttccg aacggattat gccaaacata tcaaacagtt tctacaactc
    19861 cagcttctgc acacgcctga tgccgccgaa atcatcggca gaatcctgcc cgatttggcg
    19921 cgctgcggca cgcctcaagc cttacaggaa gctttggacg cggcggaaag ggcggatgtg
    19981 cggcatttgt tggacaagat agatgttccg gtactgctgg tgttcggcgg caaagacgcg
    20041 attacaccgc cgcgtatggg cgagtatctg catcggcatt tgaaaggaag caggctggtt
    20101 gtgatggaaa aggcggcaca cgcgccgttt ttgagccatg cggaagtgtt tgccgcgctg
    20161 taccgcgact ttgtcgaagg gggtttgaca tgaatccgca ggacaaatgc tggcaggttc
    20221 accgccatct tgccgaacat accgaccaac gcctgacact cgtccgcaac gcgcccgggc
    20281 atatcctgct tgccggtgcg gatgcggaca tcagccgcag cctgttggcg aagcgctatc
    20341 cgccggcggt atttgaagaa tacgattccc gtgcggattt tttggcggct gccgcagccg
    20401 cgcgcaaggg cggtttctgg caaaaactga cgggcagggg cgtggtgcag cactgccaat
    20461 ccccgaccgt gccgctgccc gaagcgtgtg ccgatatgtt gtggtcgaac ctcggactgt
    20521 tggcggcgga acaaatcctt cccgtgctgc acaactgggc gcgcgcgctg aagacggacg
    20581 ggctgctgtt tttcacctgc ttcgggcgcg ataccttggc ggaactgaaa tcccgtctga
    20641 aagaaaacgg cattgaaagc cgcagcgtga tgtttcccga tatgcacgac ttggccgata
    20701 tgctcgccga aaacggcttt tacgatccag ttaccgatac ggcgaagctg gtgttggact
    20761 acaaaaaggc ggaaacgttt tgggcggata tggacacgct gggcgtttgg cgggcggtgg
    20821 cgtgggacga cgaaaacgcc gcgcgttcgt gtgtcggggc gatatttgaa cgggaaggcg
    20881 gtttgggcat tacgctggaa acggtgtacg gacacgccgt gaaaaaactg atgctgccgc
    20941 agggggagaa cgtggtgcgt ttttttccga agagatgatg tgcagatgac gtctgaagcc
    21001 gtttccaagt ttcagacggc atttgtctgt gaaaaccgac agaaataaag gaaatgccga
    21061 tgtatagtga attaaattta aaccggtacg gcgttggctc gccttgccgt actatctgta
    21121 ctgtccgcgg cttcgccgcc ttgtcctgat ttaaatttaa tccactatgt gccgatgccg
    21181 gagacgtata ttgcgtctat aacatcagac tgaagcagta cactgcctgc caggttaccc
    21241 gagttgaaga acacggtggc aaaaaaacac atgcgaccct gctggctttg gactggcggg
    21301 gcaacaaacc gcttggggcg gcggagctgg cggatttgaa accgctttac aaagacttta
    21361 tgtattggga acgcggtctg cacatgtata aggcaagtgc cgtcgtgccg acgggatatg
    21421 tacgggttgg gaataccgcg ccgctgtgcg gcgaagacac gcagcggtat gcctcttttt
    21481 ggggcgacgg ctacgacgtg taccgtcagt tgagatggcg gcagataccc gaaaaacaga
    21541 gaaaggcatt caaaaaagcc gccaaaagca aaaataccgt gatgtttgcc ggacgggaat
    21601 acggcatatc caaacagaat ttgagcgatg tttgggatga ttttgaagac gcgatggaac
    21661 tgaaggcgtt tccctgcctg tcttcgctgt ttctgaccaa gtggcataaa aatctatatg
    21721 aatatctgga ggaatatccg tttatcaccc gattgtgtct ggaaaaccac ggtcagaccg
    21781 tgctggattt cagcaatacg cgcataaccg acctttctgt cgatatgacc ggcgtggaat
    21841 cgctttattt gaacgaaggc ttggacagcc tgaacctgaa aggcgaaatc aaggaaaact
    21901 gcaaggtctg taccgccgga aagggcgcgg gtctgatttt ggaagtgggc aaaagcgttc
    21961 ccaaagtgcg gggtttggaa aacctgaccg ccgtcaacgt catgggcatt gccgatttcg
    22021 atatgcaaaa cctgtcggaa acgtatccca agctcaaaac catacggctg tggggcaaac
    22081 cgggcaatat cgccaatttt tccgccgtat cgggatttga ggatttggaa gtgttcactg
    22141 ccgtagattt gttcggtttc ggcgcggacg acatccctca tcccgaccgg ctgccgaagc
    22201 tgcacaggct gtggatgagc agcctgcccg aagaggcggc gaaggcagtg aagaaacttt
    22261 ataagaaacg gaaggaagac gggctggacc tgtggataga aaaagcccga aaacccgaat
    22321 ggctggcgca aaatttcgac aaccccttcc gcgattggga cggcgcggag catatcccga
    22381 aaagccatgc aaaaaaagcg gcggagctgt accggaaaac ccgtgccggc gtggtcaaac
    22441 tgctcggcaa tccgcctgaa aacatagggg aggggctggc agaggcggtc aaagcctata
    22501 ccggaggttt caacaaaatg gacaaaaaac actttatcga cacggtagag cgggaagata
    22561 ttgccgaggc gttggaaacg atattggacc tgataccgga tgggtcttgt gccgacaagg
    22621 aaaaactgtt tgaaatattt gataaaaaca ggaattttta aacagaggca atgccgtctg
    22681 aaacttggta acgggcttca gacggcatcc cgttccaaca ccgccaacac cgccgcaccg
    22741 taacgtgcgg ctttttcttc gcctacgccg tatacggcgg caagctccgc caaaccttcc
    22801 ggctgtttgg cggcaatggc gcgcagggcg gctttgctga gaatgcggta gggttcggat
    22861 tgttcgtgtt ttgcggtttc gttgcaccat tgaatcaggg cgcgcatcag gcagcgtttg
    22921 tgtttggcgg tttcatcgat gccgtctgaa aacggacggc agacggcgag gatgtcccgt
    22981 ccgtatttgg cggcgcgtac gctgcccaag ccgtgtacgg cttcgaggtc ggtttcggtt
    23041 tcgggcgtgg cggcaagcat atcggcaagg ctttcgtcgg agaggacggt atgcagggcg
    23101 cagttttccg cccttgcctg ttcataccgc caggcttcga gtttttgacg cagttgttgt
    23161 tcgcgttcgg tttgcggacg gatgacggca tcgtggctaa agtcggcagc gttttggcag
    23221 actttgagta tgccgtgtcc gaaacgttcg gttttggctt cgcccaagcc gtagatgtcg
    23281 tgcagcccgt tgaggttttg cggcattttt tcgacaaggt cgcgcagggt tttgtcgccg
    23341 aaaatcatat aggcggggat gccttcggct tcagcctgtt tcatgcgcca aacgcgcaat
    23401 gcctgccaca ggcgttcttc gcgttcggta cgcagccagt tgtctttgag ggtgcgggtg
    23461 gcgggcttgt cgcgcttgag cgggcgcagc atcacttcgg tttcgccttt gaggattttt
    23521 ttggcggctt cggtcagttg caatgcctga tatcgggcaa tgttgacggt gaggtagccg
    23581 aggctgatgc actggcggat gacgctgcgc cattctttgt cggacaattc cgcgccgatg
    23641 ccgaatgtgg acagttgctc gtgccggttg ccgcgtatcc aatcgtcgct tttgccgcgc
    23701 aaaaggttgg tgatgtaacc ggcggcaaag cgttgtccgg cgcggtacac gcagctgagt
    23761 aatttttgca ccaacaccgt gccgtcaaac cgtacgggcg gatgcaggca gttgtcgcaa
    23821 tgtccgcagg gttcggatgc ttcgccgaaa tgtttgagca acagtacgcg gcggcaggcg
    23881 gcggtttcgc agacggaaag catggcatcg agtttttgca tttcgatttg cttttgcacc
    23941 tcgtcgctgt tgccttcggc aatccgttcg cgcagcaaca cccaatcgtt caagccgtaa
    24001 cacagccaac tcacggcagg cagcccgtcc cggccggcgc gccctgattc ttgatagaaa
    24061 tgttcgacac tctggggcat atcgagatgg gcgacaaagc gcacgtcggg tttgtctatg
    24121 cccatgccga acgccacggt cgccaccacg ataatattgt cttcatgcgt aaagcggcgt
    24181 tggttttcct cgcgcacgtc catgctcaaa ccggcatgat acggaatcgc gtttaatccg
    24241 ttttcacgca aaaactgcgc cgcatcttca acctttttgc ggcttaggca atacacaatg
    24301 ccgctttgcc ccgtcatttc tttgcggatg aaatccagca gttgtttttt gccgttgttt
    24361 ttttcgataa cctgataata aatattcgtg cggtcaaagc tggagacaaa ttcggacgcg
    24421 tcgtccaagt gcagataatg cttgatgtcg gcgcgcgtgg cggcatcggc ggtggcggtc
    24481 agggcgatgc gcgggatgtt cggatagcgt tcggcaagca taccgagctg ttgatattcg
    24541 gggcggaaat cgtgtcccca ccggctgacg cagtgcgctt cgtcaatggc gaacaggctg
    24601 acggtttgtt ggtcgagaaa acgtaaaaag cggtcggtaa ccaagcgttc cggcgcgaca
    24661 taaagcagct tcagacggcc ttgggcaagc ttgtcggcaa tctcgcgcgc ctcgtctgcc
    24721 gatgtgccgc tgttgactgc cgccgcttca atcccggcca catgcaggct ggccacttgg
    24781 tcgttcatca gcgcaatcag cggcgatacg acaaccgcca cgccttcgcg catcagcgcc
    24841 ggaatctggt aacacaaaga cttgcccccg cccgtcggca tcagcaccgt caaactgccg
    24901 ccgcctgcca aagtattgat gacatcctcc tgcctgccgc gaaattcggg atagccgaat
    24961 acttcgtgca aaatctgtct ggcggtgggt cggtgcgtca ttgttccgtg tccggtaagg
    25021 gtgttggtcg gtcggcggca atatgccgtc tgaaatcggg attttagaag agtttgccca
    25081 cttccgcccc aatatcgtcg gcacgcataa acgtttcgcc gatcaggaag gtatgcacgc
    25141 cgcgcgcccg cataaattcc acatccgcct tgcctgtaat gccgctttcg gtaacgacgg
    25201 ttttgccttc cagcgcgggc agcagcgaca gggtttggtc gagggagact tcaaaagtcc
    25261 gcaggttgcg gttgtttacg ccccgcaacg gcgtggtcag gttgcggcat ttttccaatt
    25321 cggtttcgtc gtgcagctcg agcaggacgg tcatgcccaa ttcgtgcgcc agcgcctcaa
    25381 agcgttccaa ttgtccctgt tccagtgcgg cggcaatcag caggacggca tccgcccccc
    25441 atgcgcgcgc ctgataaacc tggtattcgt cgatgatgaa gtctttgcgc agcacgggca
    25501 gcaatacggc ttcgcgcgcc tgtttgaggt attcgggcga accttggaaa tagggttcgt
    25561 cggtcagtac cgacaaacac gccgccccgg cgttttcata ggcgcgggca atctcggcag
    25621 ggcggaagtc ggggcggatt aaccctttgc tcgggcttgc ctttttgatt tcggcaatga
    25681 cggcgggcag gtttaggcgg tgtttgccgc gtatcgaatc gatgaagctg cggacgggcg
    25741 cggcttctgc ggcaagtgcg cggatgtgtt cggcgttgac ggcggctttt tgggcggcaa
    25801 cttcctgtgc cttggtggca aggattttat tgaggatgtc ggtcatgtcg tgttccgtat
    25861 ttgtccgggg aaagggggaa tattagcatc aaaccgttaa cgcctgtttg tgcggaagct
    25921 gtcaaaatag gacaggacgg tctgcggcag ccattgcagg tgcagcctgc cgccggtgct
    25981 gctgacaaag ccggcgtgcc cgccgtgtgc aggttggaac agggtaacgg cttcggacac
    26041 ttcgtccgca cggggcaggg cttcgggcgg caggaagggg tcgttggcgg cattgagcag
    26101 gagcagcggt ttggcaacgt gtttgagcag cggtttgcag gaagtttggc ggtagtagtc
    26161 gtgccggtcg gcaaagccgt gcagcggtgc ggtgaaacgg tcgtcaaact cgcccagtgt
    26221 tttgcaccct gcggcaaatg ccgtctgaaa accttggagc gaacgtgctt tgggtatcag
    26281 tgtgcggagg aagtagcgcg tgtagagcag ccgcgtgatg ccgctgtcga agcggctgcc
    26341 tgccgcctct gcatcaacgg gggcggatac ggcggccgag gcgtgcggca atgccttttt
    26401 gccctgttcg cccaaatatt ttgccggcgc gttgccgccc agcgatacgc cgacggcgta
    26461 tatttcacgg taacgcgcgg tgagcgtgtc caaagcaaag gcgatttcgg cggtatcacc
    26521 caagtggtag aacaccgggg cggtgttcgc tacgccgccg cagctgcgga aatggacgac
    26581 tgcgccgtgc caaccccgat tgcgtaccgc gagcatcagt tcggccgcgt aatggctgcg
    26641 gctgcttcct tccaaaccgt gaaacagcac gaccagcggc gcatcgggcg aaatgccgcc
    26701 tgaaaagtcg taggcggttt tggttttacc cgtgctgtcg ggaagcatct cgcggcggta
    26761 tgcgggtgcg gggtgttgca ggaatttggc ggcaatcgtg tcggcattgc cgttgcggag
    26821 gaaaaagggc gtgtccggcg gtgtcaaaat cataaggtat cggtttttct gttttcagac
    26881 ggcattggtg atgcggcagc ccgtccggcc ggtgcggacg cgggcgatgc gcgcccggat
    26941 ataggcgcgg aaaaagcgtt ttccgaaaaa ggatatcggc atcggtcagc tttccacgcg
    27001 tttgaaatgg cgcggacgga agcccaaagc cgccagagat gcgaaataca gtccgccgcc
    27061 gacggcaatc aggatgcaga gctgccccgc tttccgcatt ccgccggcgt gcgcccattc
    27121 gaacggcagg caagcctgcg ccgcccacag tccgccgcac atcacggcga gcgcgagcag
    27181 cattttcgcc aagaacgccg cccaacccct gccgggccgg taaataccgt gtttgcgcaa
    27241 caggaagaac aacaatccgg cgttgatgca cgcgcccagg ccgatggcga gcgaaagccc
    27301 ggcgtgtttc aacggaccga taaaggcgag gttcatcaac tgcgtgcaga tgagcgtgaa
    27361 gatggcgatt ttgacgggcg ttttgatgtt ttgccgcgca taaaagccgg atgccaacac
    27421 tttgatcata attaaaccga ttaaaccgaa agaataggca atcagcgcgt gttgcgtcat
    27481 ttgtgcgtca aacagcgtga attctcggta cataaacagc gtcgccacca gcgggaacga
    27541 caataccgcc agtccggccg ccgccggcag cgtcagcagc atgcacaggc gcaaacccca
    27601 gtcgagcagg gcggaaaact gttccgtatc ttggtttgcc gagtgtttgg acaaagtcgg
    27661 cagcaaaatt gtaccgagtg cagcccccag cacgccgccg ggcagctcca tcatgcggtc
    27721 ggcgtaatac atccatgaaa cgctgcccga ttgcagataa gacgcgaaaa tcgtgttgat
    27781 aaccaaagaa atttgcgcca cgctcacgcc caaaatcgca ggcgccatct gtttcatgac
    27841 gcggttgacc gccgcatctt tgaaattcag tttgggcagt ttcaaaaagc ccagtttcgc
    27901 cagccacggc agttggaaac cgagctgcaa aataccgccg acaaaaaccg cccacgccag
    27961 cgcggtaacg ggcggatcga aatacggcac gaaaaacagt gcgaatacga taaaagagat
    28021 gtttaaaaac gtgggcgtaa acgcgggaat gccgaactta tggtaggaat tgagtatcga
    28081 gccgacaaaa gaagacaaag aaatcaataa tatataagga aacgtaatcc gcagcaggct
    28141 gatggaaagt tggaacttgt ccgcgtcttt ggtaaagccg ggcgcggaaa cataaatcac
    28201 ccaaggcgcg gcaagtatgc ccagcgcggt aacgacgatc agcacaaacg acagcattcc
    28261 cgcaacgtgg cggataaaag cctccgtcgc ctctttagaa cgcgtttcct tatattccgc
    28321 caaaatcggc acaaacgctt gggcaaacgc cccctccgca aacacgcggc gaagcaggtt
    28381 gggcagtttg aacgcgacaa aaaacgcatc cgtcgccata cccgcgccga atgcccgcgc
    28441 aatgaccgta tcgcgcacaa atcccaaaac gcgcgacacc atcgtcaggc tgccgacttt
    28501 tgccaaagct ccaagcatat tcatcgtgtt tccttttcgg ttgaaacccc gccctttagg
    28561 gcggcaggat cagactttat agtggattaa caaaaatcag gacaaggcgg cgaagccgca
    28621 gacagtacaa atagtacggc aaggcgaggc aacgccgtac cggtttttgt taatccacta
    28681 tatttgaaag gggtgtaacc cttccaaatc agggcaacgc atagggcggt gctttatgtg
    28741 ccgtcctgtg tgttgaaaca tcattgttcc ccaacagccg tatccgtccg gggcggcgcg
    28801 tattgtacga cagaaaccgc ttcggatggc atcgggtttg atgccgtctg aagcggtttc
    28861 ccgaaacgaa aacgtccttt ttcggcggca aactgtatca acacgcgaaa atacaataaa
    28921 ataccaatat ccgatttatt tccaacatca cggagagccg tatgaaatcc agacacctcg
    28981 ccctcggcgt tgccgccctg ttcgcccttg ccgcgtgcga cagcaaagtc caaaccagcg
    29041 tccccgccga cagcgcgcct gccgcttcgg cagccgccgc cccggcagga ctggtcgaag
    29101 ggcaaaacta caccgtcctt gccaacccga ttccccaaca gcaggcaggc aaggttgaag
    29161 tgcttgagtt tttcggctat ttttgtccgc actgcgcccg cctcgaacct gttttgagca
    29221 aacacgccaa gtcttttaaa gacgatatgt acctgcgtac cgaacacgtc gtctggcaga
    29281 aagaaatgct gccgctggca cgcctcgccg ccgccgtcga tatggctgcc gccgaaagca
    29341 aagatgtggc gaacagccat attttcgatg cgatggtcaa ccaaaaaatc aagctgcaag
    29401 agccggaagt cctcaaaaaa tggctgggcg aacaaaccgc ctttgacggc aaaaaagtcc
    29461 ttgccgccta cgaatccccc gaaagtcagg cgcgcgccgg caaaatgcag gagctgaccg
    29521 aaaccttcca aatcgacggt acgcccacgg ttatcgtcgg cggcaaatat aaagtcgaat
    29581 ttgccgactg ggagtccggt atgaacacca tcgacctttt ggcggacaaa gtacgtgaag
    29641 aacaaaaagc cgcgcagtag gcccgtttga aaaatgccgt ctgaaacttg gttttcagac
    29701 ggcattttga ttgggtttag aacgtaaagc ccgtttccag ttcttcatcg ccgaccagtt
    29761 cgaccaagag cgcgtagagc ggggcgagtt cggcataacg gcgcgatacg cggcgcagat
    29821 agtttaagaa acgcgggatt tccggacggt atttgtcttt gccgtcgcgg tagtacaggc
    29881 gtgcgaagat gcccgcgacc ttcaagtgcc gctgcacgcc catccattcg aaccggcggt
    29941 aaaactcgtc aaactcggca gggacaggca agccggcagc ccgcgccttt tcccagtagc
    30001 ggataaccaa atccaaaaca aactcttctt cccactcgat aaaggcatcg cgcaacagcg
    30061 acaccaaatc gtaggaaatc gggccgtaaa gcgcgtcttg gaagtctaaa acgcccggcc
    30121 tgccgcgcgt cagcatcagg ttgcggacga taaagtcgcg gtgcacgtag actttgggct
    30181 gcgccaacaa gggcggcagc agcgtatcgg cggtttgctg ccaaagttgg cgttgtttga
    30241 atgttaattc gcgccccaat tcttttgcga caaaccattc cgggaacagg ttgatttcgc
    30301 gcagcatcgt ttcacggtca tattcgggca aaaccccttc acggcttgcc ttctgcaatc
    30361 cgaccagctc gccgatggcc tccagcaaca gggctttgtg tgccgcttcg ccctgctcct
    30421 gaagcatcgc ggtcaaaaac gtcgtattgc ccaagtcgtt caataccaca aaccccaaat
    30481 ccgtgtccgc gtgcaatacc tgcggcacat tgaccatgtc aaacagcttc tgcaccttca
    30541 aataaggcgc gacactcatc ttgtcgggcg gcgcatccat acagacgacg ctgccgccgt
    30601 ctgaaaacgc cgcacggaaa tagcggcgga aatcagcatc cgccgccgcg aaggacagat
    30661 cgaagtcccg ttcgggataa acggtctgaa gccaattttt cagttcggtt tgccgttgca
    30721 taacagtatc cgggcatttc gggttacaat aaacactatt ctaaccggta aaccgacttg
    30781 aggggcgatt ttggctcgtt tattttcact caaaccactg gtgctggcat tgggcttctg
    30841 tttcggcacg cattgcgccg ccgataccgt tgcggcggaa gaggcggacg ggcgtgtcgc
    30901 agaaggcggt gcgcagggcg cgtccgaatc cgcacaagct tccgatttga ccctcggttc
    30961 gacctgcctg ttttgcagta acgaaagcgg cagccccgag agaaccgaag ccgccgtcca
    31021 aggcagcggc gaagcatccg tccccgaaga ctatacgcgc attgttgccg acaggatgga
    31081 aggacagtcg caggttaagg tgcgcgcgga aggaagcgtt atcatcgaac gggacggcgc
    31141 agtcctcaat accgattggg cggattacga ccagtcgggc gacaccgtta ccgtaggcga
    31201 ccggttcgcc ctccaacagg acggtacgct gattcggggc gaaaccctga cctacaatct
    31261 cgatcagcag accggcgaag cgcacaacgt ccgtatggaa accgaacaag gcggacggcg
    31321 gctgcaaagc gtcagccgca ccgccgaaat gttgggcgaa gggcgttaca aactgacgga
    31381 aacccaattc aacacctgtt ccgccggaga tgccggctgg tatgtcaagg ccgcctctgt
    31441 cgaagccgat cggggaaaag gcataggcgt tgccaaacac gccgccttcg tgttcggcgg
    31501 cgttcccctt ttctatacgc cttgggcgga cttcccgctt gacggcaacc gcaaaagcgg
    31561 actgctcgtc ccgtccgtat ctgccggttc ggacggcgtt tccctttccg tcccctatta
    31621 tttcaacctt gcccccaact tcgatgccac tttcgccccc ggcattatcg gcgaacgcgg
    31681 cgcgacgttt gacggacaaa tccgttacct gcgtcccgat tacagcggac agaccgacct
    31741 gacctggttg ccgcacgata agaaaagcgg caggaacaac cgctatcagg caaaatggca
    31801 gcaccggcac gacatttccg acacgcttca ggcgggtgtc gatttcaacc aagtctccga
    31861 cagcggctac taccgcgact tttacggcgg cgaagaaatc gccggcaacg tcaacctcaa
    31921 ccgccgcgta tggctggatt atggcggcag ggcggcggga ggcagcctga atgccggcct
    31981 ttcggttcag aaataccaga cgctggcaaa ccaaagcggc tacaaagacg aaccttacgc
    32041 catcatgccc cgcctttctg ccgattggca taaaaacgca ggcagggcgc aaatcggcgt
    32101 gtccgcacaa tttacccgct tcagccacga cggccgccaa gacggcagcc gactggtcgt
    32161 gtatcccggt atcaaatggg atttcagcaa cagctggggc tacgtccgcc ccaaactggg
    32221 gctgcacgcc acttattaca gcctcgacag tttcggcggc aaagcatccc gcagcgtcgg
    32281 gcgcgttttg cccgttgtca atatcgacgg cggcacaacc ttcgaacgca atacgcgcct
    32341 gttcggcggc ggagtcgtgc aaaccatcga gccgcgcctg ttctacaact atattcctgc
    32401 caaatctcaa aacgacctgc ccaatttcga ttcgtcggaa agcagcttcg gctacgggca
    32461 gcttttccgc gaaaacctct attacggcaa cgaccgcatc aacgccgcca acagcctttc
    32521 caccgccgtg cagagccgta ttttggacgg cgcgacgggg gaggagcgtt tccgcgccgg
    32581 tatcggtcag aaattctatt tcaaggatga tgcggtgatg cttgacggca gcgtcggcaa
    32641 aaatccgcgc agccgttccg actgggtggc attcgcctcc ggcggcatag gcgggcgttt
    32701 caccctcgac agcagcatcc actacaacca aaacgacaaa cgcgccgaac attacgccgt
    32761 cggcgcaggc taccgccccg cccccggaaa agtgttgaac gcccgctaca aatacgggcg
    32821 caacgaaaaa atctacctgc aggcggacgg ttcctatttt tacgacaaac tcagccagct
    32881 cgacctgtcc gcacaatggc cgctgacgcg caacctgtct gccgtcgtcc gctacaacta
    32941 cggttttgaa gccaaaaaac cgatagaaat gcttgccggt gcagaataca aaagcagttg
    33001 cggctgctgg ggcgcgggcg tgtacgccca acgctacgtt accggcgaaa acacctacaa
    33061 aaacgccgtc tttttttcac ttcagttgaa agacctcagc agcgtcggca gaaaccccgc
    33121 aggcaggatg gatgtcgccg ttcccggcta catccccgcc cactctcttt ccgccggacg
    33181 caacaaacgg ccctgaccgt cggaaacccg gcaggagcac cgttcctgca caagatagca
    33241 ttccaccgac aaccccaaac ccgccatcaa aggcaggatt caaacgataa ggaaagaatg
    33301 atgaaaatca aagccctgat gattgccgcc gcattgctgg cagcagccga tgtccacgcc
    33361 gcaccgcaaa aggcaaaaac cgcgcccgcc aaagcggtca aagctgccgc cacggcgcaa
    33421 aaagaagccg cacccgcaca acagcagggc ggtatccgct tttcagacgg cattgccgcc
    33481 gttgccgaca acgaagtcat caccaaccgc cggcttgccg aagccgttgc cgaagccaaa
    33541 gccaccctgc ccgaagacgc gcagataagt gaatccgagc tgtcccgaca ggtgctgatg
    33601 cagcttgtca accaatccct gattgtacag gcgggcaaac gccgcaacat tcaggcaagt
    33661 gaagcggaaa tcgatgccgt cgtcgcacaa aatcccgccc tcaaaaacct cagccccacc
    33721 caacgccgcg agcttgccga caacatcatt gccgaaaaag tccgccagca ggcagtgatg
    33781 caaaacagcc gcgtgagcga agctgaaatt gatgccttcc tcgagcaggc gcaaaaacaa
    33841 ggcatcaccc tgcccgaagg cgcaccgttg cgccaatacc gcgcccaaca catcctgatt
    33901 aaagccgaca gcgaaaacgc cgccgtcggc gcggaaagta ccatccgcaa aatctacgac
    33961 caggcgcgca acggcacgga tttcgcaggt ttggcacgcc gatattccca agacgcaagc
    34021 gcgggcaatg gcggcgactt gggctggttt gccgacggcg taatggttcc cgcctttgaa
    34081 gaagccgtcc acgcgctcaa acccggacag gtcggcgcgc ctgtccgcac ccaattcggc
    34141 tggcacatca tcaaattgaa cgaagtgcgc gatgccggca cgccggagga acgtatccgc
    34201 aattccgtgc ggcaatacat cttccaacaa aaagccggac aggcaaccgt caacctgttg
    34261 cgcgacctgc attccggcgc gtatgtcgac atccgctaag gcggtttgaa tccaaaagtc
    34321 ataccgatcg ggcaaaagtc cgggcggtat ggcttttttg aatttcgagt tacttttaca
    34381 ccgccattcg tcattcccgc gcaggcggga atctagcaac gaaaagtaac aggaatttat
    34441 cgggaatggc cggagtttaa aggtctggat tcccgccttc gcgggaatga cgattcagaa
    34501 gttacacgaa actcaaaaaa aaacgaaacc gaacgaaccg gattcccgct tttacgggaa
    34561 tgacggcata tcggtttccg tgaggacaaa cctagattcc cgcctgcgcg ggaatgacgg
    34621 gattttagat tgcgggtatt tatcgggaat ggcgatttaa aaattaccta aaactaaact
    34681 taaaagcaac tgaaacttaa aaaactaaaa tttcgcctgc gtgggaagga tgggatttca
    34741 gatttctgtt tttgtgggaa tttgccgtat cgggcttcag acggcattgc ctgccgtttt
    34801 gcccccgggt gcggctgcct tgatgtagtt gagcgagaca aactgcttct cggcatccaa
    34861 ttcggtgatt ttaaacaatg cctgcgattt gggcagcgcg tcaaacggaa taccggtcgc
    34921 gcgcgttgtc agtggcagac cttcgatgcg gacgaggtct tctttcagaa tcgtcgcggt
    34981 cagttcgctg atgccttgtt gttgcaggta cacgaggctc cagtaggctt ccatctgccg
    35041 ttggaagtcg gcgtaggcgg cgtaggcggt gtcgaaatcg cgcagggcgg cgaagagcgc
    35101 ggcatcgctt ttttgataca gcggctcggc agtgtcgtcg atcaggctga tcagctgctt
    35161 ttggttgatg tagtcggcgg cgcggcgcag cggcgaggta aaccagccgt aatgctgcac
    35221 gcccatgccg atgtgcggct cggattgggt gctcatgcgc actttgcctg ccggttggac
    35281 gcggaaaagg ccgggcagcc cgttttcgtc tagcatttgc gcccaagtgc tgttggcaag
    35341 aatcatcatc tcgctgacca gcgtatcgat gggcgaaccg cgttcgcggc ggacgacgga
    35401 gacgttgcct tcttcatcca attcgatgct gtaatcgtat tgcggcgcgc ggtcgggttc
    35461 gtatttgccg cgcgcttttt gcagggcggt ggcgaattga tagaaccaaa tcaggtcttg
    35521 atggtgggcg aacatcattt cgcctgcttg gtccaagccg gtttctgcgt tgaaatgcgg
    35581 ctcgatggct tggatacgca ggtttgcggc gatgttgacg gcttcgattt tgcaggtcgg
    35641 ctcgccgacg ttgaactcgc cgtccacatc gaaataaatg ctgacggcag ggcggtatgc
    35701 gcctgcatcg aggctgaacg cggtaatcca gttttcgggc agcatcgtga ttttgccgcc
    35761 ggggaaataa accgtactca accgctgcat aatgatttgt tccattccgc cgccttgtcg
    35821 gacggcaagc gacggcgcgg cgatgtggat gccgacgcgc ttcgtgccgt tgcccaaatc
    35881 ggtcaggctc aaggcatcgt ccacttcggt ggtcgattcg tcgtcaatgg aaaaggcggt
    35941 aacgtcggcc ttgggcaggt cgggcatttc gggaagggag aggtcgggga aacctgttcc
    36001 tttggggaag tatttgattt caaagccttc ttgcaggtat tgcggaatgg acgtaatgcc
    36061 gcccgttttt ttcgccagtt cgtaggcgga ggttttcagt gcgtcggcgg ctttggtaaa
    36121 ggctttgtag gtcagcgact gtttgtcggg cgcgtgtaag atggttctca aatccgccgc
    36181 gatttcagac ggcatctcgc cgcgtttcaa ggcttccgcc caagcgtcga tttgcgcgtc
    36241 ttgctgtttt ttgcgttcga tggcggcaag cgcttgtttc aaagtttctt cgggcgcggc
    36301 tttgaacacg cctttggctt ttttgtagaa atacaccggc gcggcgtaca gcgcaatcaa
    36361 agtcgccgcc agctcggttt tggtcggcgc atggccgtaa tattcttcgg cgatggcttc
    36421 ggcggtaaac tcctcttcgc cgcatacttc ccacaataaa tcggtgtcga tgtccgccgc
    36481 ctgcgcctgc gcgttttcca aaaacgccgc catatcgccg tcaaactcgg caaagacatt
    36541 gtttgccttc actttggtgc gtttgccgtg ttgggtatcg acttggtagg tagcgtcgtt
    36601 tttttggacg acgacggcaa ctttgaactg gccggactct tcgtaaaaaa tattcatttt
    36661 tcggattttt ctgtggaaac tcaagcgggc gattttagca gattaccgaa aatgccgtct
    36721 gaaaaaaggt tgggggaagg cgggtgcggc tttgcggtgc ttgcgttgcg tttttgacgg
    36781 ggtacaatcg ccgtttttga acggaggacg gaatggagaa tgtaaaccgc gtgccggagc
    36841 aggcacgtta tgatgccgaa cgcaggcagg cagacgaagc attggcggac gtgtttccgg
    36901 cagtcagtat tttcggcagc gcgcgcacgc cgcaggatca tgcggattat gcgtttgcct
    36961 gccgtctggc gcggcggctg tcggattcgg gtattgccgt catttcgggc ggcgggccgg
    37021 ggattatgga ggcggcaaac aagggcgcgt ttgccgggaa gtcggtttcg gtagggctga
    37081 acattgccct gccgcacgag cagaaaccga atccgtatca ggacatcgcc ttgcggtttt
    37141 cccgttttgc cgaacgcaag gcagtgtttt tccgctattc ccaagcatat gtcgtgatgc
    37201 cgggcggctt cgggacgctg gacgaattgt ttgaaatcct gaccttggtg cagacgggca
    37261 aagtgccgcc gcgtccggtc gttttggttg gaaaggcgtt ttggtcgggc ttggcggagt
    37321 ggataaacgc gcagcttttg gcgcgcggta tgatttccga aggggccgct tctttgttct
    37381 ccatatcgga cgacgaagac gaaatcattg cgtatctgtc ggaacacggg cttcagacgg
    37441 catagcgtcc tgagagtgat gtataattgc aaacaatttg tcaatttttg atgtcttttc
    37501 cgaacaggat gccgatatga tcaaccccat cgcctcgctt tcccccctag acggccgtta
    37561 tgcccaatcc gttgaagcat tgcgcccgat tttttcagag tacggactga tgaaggcgcg
    37621 cgtcaaagtc gaattaaact ggctcaaagc cctggccgcc gagccgaaga ttgccgaagt
    37681 gccgcccttc agtgccgaaa cgcttgccga aatcgacaaa gtcatcgaaa acttttcatt
    37741 agaagacgcg gccgccgtca aagccatcga agccacgacc aatcatgatg tcaaagccat
    37801 cgaatattgg ctgaaaaaac gttttgccga agtgccggaa gtcgccgccg tgagcgagtt
    37861 catccacttc gcctgcacca gcgaagacat caacaacctg tcccacgccc tgatgttgca
    37921 gcaagcgcgc gaaaccgtca tcctgcccaa actggcagaa atcatcggaa agctcaccga
    37981 tatggcgcac gagcttgccg ccgtcccgat gatgagccgc acccacggcc agcccgccac
    38041 gccgaccact ttgggcaaag aaaccgccaa tgtcgtgtac cgcctgcaac gccagttcaa
    38101 aatccttcag gcgcaagaat ttctcggcaa aatcaacggc gcggtcggca actacaacgc
    38161 ccacatggcc gcctatcccg atgtggattg ggaaacacac tgccgcaact tcgtcgaaat
    38221 cagcctcggc ctgaccttca acccctacac catccaaatc gagccgcacg actatatggc
    38281 ggagtttttc caaaccctca gccgtgtcaa cacgattctc atcgacttca gccgcgacgt
    38341 ttggggttat atttcattgg gttatttcaa acaaaaagtc aaagcgggcg aagtcggctc
    38401 ttccaccatg ccgcacaaag tcaaccccat cgactttgaa aactccgagg gcaacctcgg
    38461 catggcaaac gccgtattgg gctttttggc ggaaaaactg cccgtctcac gctggcagcg
    38521 cgatttgacc gacagcaccg tattgcgcaa tatgggcgtg ggcgtgggct atgccgtgtt
    38581 gggtttcgcc gcccacctgc gcggtctgaa caagctcgaa cccaaccctg ccgcgcttgc
    38641 cgccgatttg gatgtcactt gggagctgct cgccgagccg attcaaaccg taatgcgccg
    38701 ttacggtgtc gccaatcctt acgagaagct gaaagacctg acgcacggta aagacggcat
    38761 tacgcccgaa gtgttgaaac tctttatcga atcgttggaa attccggcag aagccaaagc
    38821 caaattgctt gagctgaccc ctgcgttgta tgtgggcaag gctgaagcgt tggcgaaacg
    38881 gatttgagtg cttattgaaa ccgatgccgt ccgaacgcgc gttcagacgg catttttaag
    38941 ataacgggac atacggggcg atatttatgc aagctgtccg atacaggcct gaaattgacg
    39001 gattgcgggc cgtcgccgtg ctatccgtca ttattttcca cctgaataac cgctggctgc
    39061 ccggaggatt cctgggggtg gacattttct ttgtcatctc gggattcctc attaccggca
    39121 tcattctttc tgaaatacag aacggttctt tttctttccg ggatttttat acccgcagga
    39181 ttaagcggat ttatcctgcc tttattgcgg ccgtgtccct ggcttcggtg attgcctctc
    39241 aaatcttcct ttacgaagat ttcaaccaaa tgaggaaaac catagagctt tctacggttt
    39301 ttttgtccaa tatttatttg gggttccgat tggggtattt cgatttgagt gccgacgaga
    39361 accccgtact gcatatctgg tctttggcag tagaggaaca gtattacctc ctgtatcctc
    39421 ttttgctgat attctgctgc aaaaagacaa aatcgctacg ggcgttgcgc cacatcagca
    39481 tcatcctgtt cctgattttg actgccacat cgtttttgcc ggccgcgttt tataccgaca
    39541 tcctcaacca acccaatact tattaccttt cgacactgag gtttcccgag ctgttggtgg
    39601 gttcgctgtt ggcggtttac gggcaaacgc aaaacggcag acggcaaaca gaaaatggaa
    39661 aacggcagtt gctttcatta ctctgtttcg gcgcattgct tgtctgcctg ttcgtgatcg
    39721 acaaacacga tccgtttatc ccgggaataa ccctgctcct tccctgcctg ctgacggcgc
    39781 tgcttatccg gagtatgcaa tacgggacac ttccgacccg catcctgtcg gcaagcccca
    39841 tcgtatttgt cggcaaaatc tcttattccc tatacctgta ccattggatt tttatttcct
    39901 tcgcccatta cattacaggc gacaaacagc tcggattgcc tgccgtatcg gcggttgccg
    39961 cgttgacggc cggattttcc ctgttgagct attatttgat tgaacagccg cttagaaaac
    40021 ggaagatgac cttcaaaaag gcatttttct gcctttatct cgccccgtcc ctgatgcttg
    40081 tcggttacaa cctgtattca agagggatat tgaaacagga acacctccgc ccgctgcccg
    40141 gcacgcccgt tgctgcggaa aataattttc cggaaaccgt cttgaccctc ggcgactcgc
    40201 acgccggaca cctgcggggt tttctggatt atgtcggcgg cagggaaggg tggaaagcta
    40261 aaatcctgtc cctcgattcg gagtgtttgg tttgggtgga tgagaagctg gcagacaacc
    40321 cgttgtgccg aaaataccgg gatgaagttg aaaaagccga agccgttttc attgcccaat
    40381 tctatgattt gaggatgggc ggccagcccg tgccgagatt tgaagcgcaa tccttcctga
    40441 tacccggatt ccaagcccga ttcagggaaa ccgtcaaaag gatagccgcc gtcaaacccg
    40501 tctatgtttt tgcaaacaac acatcaatca gccgttcgcc cctgagggag gaaaaattga
    40561 aaagatttgc tataaaccaa tatctgcgcc ccattcaggc tatgggcgac atcggcaaga
    40621 gcaatcaggc ggtctttgat ttggttaaag atattcccaa tgtgcattgg gtggacgcac
    40681 aaaaatacct gcctgaaaac acggtcgaaa tacacggacg ctatctttac ggcgaccaag
    40741 accacctgac ctatttcggt tcttattata tggtgcggga attccacaaa cacgaaagcc
    40801 tgctcaagca ttcccgaggc ggcgcattgc agtagcctgc cttcttgccg gatattgcct
    40861 ttggcagcct atgccgctgt ttgccctttg aggcggcttt tattttgccg ttttgaggcc
    40921 ggggtcggga ataaccgttt tttgatgatt ttccctcccc ggctgtgtca tcaaatccct
    40981 agttgccttt ccaaactctc caccagattg tcatccagtt tcaaagcctg cgacaggcgg
    41041 gcgaggaaga cggtttcttt ccgcgacaaa tcggcacaga ccaaccttgc cgccagatag
    41101 gtctccgccg ccaacgcctc atcgttgccg acggcggcgg cgatgtcccc gatgcttgcg
    41161 ggcaggcggt attcggcggc gagccatgcg gcagtttcgg ggtctgtgcc gctttcctgt
    41221 tcgatagtcc ggcgttcggc ttcgtctatc atgccgtctg aagcggcggc ggctatcatg
    41281 gtacgcaata cggtgcggct gtatgtttct tcggtttttc cggcaggttg gaaatcgctt
    41341 tgtgttacgg ttgcccgccc tttgttttgc tgccacatct gatagccccg gtaggcgagg
    41401 tagcccaaag cggcggtcga accgattttg gtgatggttt tgcggttttt accgttcagc
    41461 agcatggagg cgacaccggc aaccagcgcg cctccgccga atgaattgag cgggctgccg
    41521 gagaatgtgc tgcctttttt ttgaaccgtg cttaagactt ggttgagcaa ccgggtgaag
    41581 ttcatgattt ttcctttctg ttgcgggaag ggcggtatgt ttaccctatc cttttaaacg
    41641 gtggcaggcc ggccaataat tgttggccgt accgctgcgt tttgatgcgg ttgtcgagga
    41701 tggttacgcg gccgtagtct tgttcggtgc ggatgaggcg gccgacggcc tggatgagtt
    41761 tgatgccggc ttcggggacg gtgatttcga tgaaggggtt gccgccgcgt tgttctatcc
    41821 aacggttttg ggttttttcg atggggttgt cgggcatggc gaaggggagt ttggcgatga
    41881 tgacttgcac gcaggcggtg ccgggcaggt cgagcccttc ggcgaagctg tcgagtccga
    41941 agatgatgct ggctttgcct tcttctatgg cttggtggtg tttttgcagg aggacggctt
    42001 tgggtaattc gccttgtacg agcaagagcg gcaggtagtc tccgggcagg tgcagggcga
    42061 catcctgcat ttgtttgcgc gaggaaaaca ggacgagtgt gccgatggct tcggtgggcg
    42121 aaatcagctt gggcagccat tcgatgacgg cggcggtgtg ggcttcgggg tctttggggc
    42181 tggcgtatat ggaggggatg tagagttcgc cctgtttttc aaagtcaaag gggcttttga
    42241 gggcgagggt ggtggtttcg ggcagccaca gcaggccggt ttggcgcaaa atcaagttga
    42301 agctgccgag cgattgcagg gtggccgaag tcagcaccgc gcctgccgcg cgccgccaca
    42361 ggctgttggc aaggtgggac gcgctgctga tggggctggc attgaaaata tagtcgtttt
    42421 tgtcgtcggc acggcgggct atccatttcg ccaacggctc ctcgccctca atggaaacag
    42481 tggagagcaa atcccaaacc gcgctgattt gttcgatacg ggcgataaaa aggccgaact
    42541 cgccggtcag gcggtcgatg agcgcaccgt cctgttcttt ttcgcggcgt gcggcggaaa
    42601 gcgcatcgtt cagcccgaca acgtgtttga gcaggctgcg tgcagcaatg gccgtattgg
    42661 aaacggtggt ttcgaggcct tcggggattt tgccgtcttc ccacagccaa gtcggttcgc
    42721 tgttggttcg tctgtcgttt tcagacagcc ccatacttaa agacggctct tccgccaaat
    42781 ggaattgcca ttcgtgcagg ctgtcgagca aggatgcggc ggcttcgtcg gcaaggttgg
    42841 caagttcggc tttatcggta agcgcggcaa ttttgccggt aagctgcggc agtttttcca
    42901 gcgtccaaac ggcaatattc catgaatgtt cggcggcaaa acggctgagg gcttttttgg
    42961 gcaggtggtg cgcttcgtct atgcaataga aactgttttc gggcgcaggc agaatcacgc
    43021 cgccgcccat gctgatgtcg gcaagcagaa gatcgtggtt ggcaacaacg acatcgacgg
    43081 tttccaacat atcgcgtgcc aggtaaaaag ggcattccgg acggttggga caggcggctt
    43141 tcaggcagcc gtggcggtcg ttggtcactt tgagccaaat cgcgtcatcg attttttccg
    43201 gccaagcgtc gcggtcgccg ttgaaccgtc gggcggaaaa ttcgtcggcg atgtcgcgca
    43261 gcagcttcaa ttcttccggc ttgggtttgc tgtcccacaa gacggcgggg gcttcaaagc
    43321 cgagcaggtt ttgctgggcg ttgctttgcg tcagttgata gagtttgtag gggcagagat
    43381 agcggccgcg ccctttggca agtgcgaagg tcagttccaa accgcttttt tcgaccagaa
    43441 acggcaggtc gcggtctacc aactgctcct gcaaggcaac cgtcgcgctg ctcacaatca
    43501 gccgcttgcc gcgtgtttgc gccatgatgc cgcccgcaag caggtaggca agcgatttgc
    43561 ccacgccggt cggcccttcg attacggcaa tgctttcgcc ctcgcgcttg ggcggctcgc
    43621 cgccttcttc gcgcgtcaac gtccgcgaaa aagcgttggc aaccgccgca atcatttccc
    43681 gctgcgaagc acgcggacgg aaaccgggca ggtttttgcc gatattttgg taatggtcgc
    43741 ggatggcgtt tttttctaaa tcggtgagca tagtatcggt gggcggatga tttggggtca
    43801 ttttaacatt gcgcggatgc ggtacggtat cgttgtcgga cggtggttcg ggcatatctg
    43861 attattgaaa gtaaaaaaac ggaagatatt gggtcatccg tacaaaatgc cgtctgaagc
    43921 gggaaacggg cttcagacgg cattgccgcg cttatacgcc ggcgacgggg cgggcgggat
    43981 agccgtgggt atcgaccgaa caggcaaacc gccaaggcgt gtggacggtg tcggcggaca
    44041 ggtgggcgag ttcgggaatg tgccgtttga taaaagtacc gtccgggtcg gtacggtatg
    44101 aggcggcggc aatgtcgggg caggtgtgcc gtgaggcggc aagccgccag ttgccttggt
    44161 tgattgccgc atcgaaatcg gtcagctgcc gggcaaacca tatctcgcct tcgcggcggg
    44221 ggaggtttaa aacgtggcag aaaaaatccg cgctcaagcg tctcagggcg gggtggaggc
    44281 tgccggtttt gtgcaaacag cgcatcgcgg catcgataat cggaatgccg gtccggccct
    44341 gctgccaaag cgtcaggcgc agggtgtgtt ccggattgcc gtctgaaggg tcgtcatccg
    44401 cgtgctgcaa ggcaagttga aggaaaaaat cgcggcggat gatgttgtcc gcccacgcgt
    44461 tcagacggcg ttcgaggctt tcccgcgcga gcaggcgcgg cgagatgcag ccgacactca
    44521 aatacgcgcc catcagcgaa gtgtttttgc gcgaagggaa atcctttaaa acggagtagg
    44581 aagccgcctg ttcgagaaac cgccgccact gccgccaagc cgccgtttcg ccgccgtttt
    44641 gcgacaggaa gatgccgtct gaaagcgcgg caggcggcgg ggcgggcagg ttttcgggga
    44701 agggttggcg gtatgccgcg aataggtccg aaccggcggg gggctgcttg gaaaagcggt
    44761 cgagccatac ttcgcggtag cggttgaaat cggtgtgtgc cgtaccgttg tctggtgtca
    44821 ggtcggtttt gccgaaaacg gaacggtcgt tgacgaaggt taacgcgatg ccgtgtttgt
    44881 ccaattcgtg ccaaagggcg ttgtcggcga gtttgtcggc aaaagtatgg gattcgtcgg
    44941 cgatgacggc gcggatattg aggcggacgg cgagccggac aagcccggca ggcgatgccg
    45001 ccgtgtagag cgggatgccg cgccttgcca gcccttgggc gagttcggcg gcggattggc
    45061 ggtagaacgc ggcgcggcgc gggttgtctg tttcggcatc gtcaatgcaa atgccgataa
    45121 cgggcgaacc ttcggcaacg gcggcgcata aggcggcgtt gtcgcggatg cggaggtttt
    45181 ggcggaacca gacgagcgtg tgcgcggcgc gcgtgtccgc ataaaggggg agggcggttt
    45241 cagacggcat ttcggcagcc tttcctgctg gcgatttttt cgttcagaaa atcgatgaaa
    45301 ctgcggactt tcgcactcaa aaatgccctg tccgcataaa cggcgttcag ccggtcggtc
    45361 gggacggcgt atccgggcag cagcctcacc agcgggccgc agcgcaaatc gtgttccgcc
    45421 gcccaaagcg gctgataacc gatgcacgcg cccgccttaa tcatttcgcg catcatcagc
    45481 gtgttgtcgg tacggatgac gggggtcagt tcaagccggt atttcttgcc gtccgatttg
    45541 cgggtgaggt cgagtttctg ctggttggtg taggtcggca ggacggcagg cagccccgcc
    45601 acttcttccg gtgtttccgg cacgccgttg cgcctcagga agtcgggcga ggcaagcagg
    45661 gcaaattcga tttccgccag cgggcgcgca atcagcgaag gggaaagggt ttgggaaacg
    45721 cgcaacgcca aatccacgcc ttcggcaatc aaatcgacgt ggcggttgtc caaaatcagt
    45781 tccaacgcca cttcgggata acgttcgcgg tattccgcca gccagttgca tatctggctg
    45841 ccggcaaacc acagcggcat cgttacgcgc agcagcccct gcggtttttc cgtccccccg
    45901 gcggcttttt gcgcggcatc gtcgagcgtg tcgagcgcgt aactgcattg ccggtagtat
    45961 tcttccccgg cttcggtcag gctgaggttg cggctgttgt ggtgcaggag tttggcttgg
    46021 acggtgtttt ccaagtgact gacgtgtttg cttgccattg cggtggagat gccgagcgcg
    46081 tcggcggcgc gggtgaagcc gccgctttgg acgacttggc ggaaaacttt gaggctgaac
    46141 agggtgtcca tattttcttg tgtggaaaag ttgtatcaat aaaagcagta tatatttgaa
    46201 aaagggaaac atctatactc tgccgcctga aatgaagaca aatatcaaag gagcttttat
    46261 gtccgattgc tgcaaccgta tccaaccggt tttgctttct gttttgcgta tcgtaaccgc
    46321 ctacctgttt ttgttgcacg gtacgtcgaa aatcttcgcc ttccccattg aaatgggcag
    46381 cggttcgccc ggcgggctgt tgctgcttgc cggtatttta gaaattgtcg gcggcatttt
    46441 gctggtgttg ggcctgtttg cgcgccctgc cgcgtttgtt ttgtccggcc agatggcggt
    46501 tgcctatttt atggcgcacg cttccggaaa tgctttgttc ccgattgcca acggcggcga
    46561 gtccgcagtg ctgttctgct tcgtatttct ctatatcgcg gcagcgggcg gcggagcatg
    46621 gtcgctggac aggctgtttt tcaagcgtaa agcctgaacc ggactgccta aagtgtattt
    46681 tgttgaatgt ttttgaggaa aagaaatgag ccgtcaatcc ctgcaacagg ctgccgaaag
    46741 ccgccgttcc gtttattcgt taaataaaaa cctgcccgtt ggcaaagatg aaatcgtcca
    46801 aatcgtcgaa cacgccgttt tgcacacacc tttttcgttc aattcccaat ctgcccgcgt
    46861 ggtcgtgctg tttggcgaag ag
//
LOCUS       DAXFZM010000004        46170 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.004, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000004 DAXFZM010000000
VERSION     DAXFZM010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 46170)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 46170)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..46170
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.004"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(143..862)
                     /gene="pyrH"
                     /locus_tag="ACFJAG_000142"
     CDS             complement(143..862)
                     /gene="pyrH"
                     /locus_tag="ACFJAG_000142"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0033862 - UMP kinase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HFC3979555.1"
                     /translation="MTQQIKYKRVLLKLSGESLMGSDPFGINHDTIVQTVGEIAEIVK
                     MGVQVGIVVGGGNIFRGVSAQAGSMDRATADYMGMMATVMNALALKDAFETLGIKARV
                     QSALSMQQIAETYARPKAIQYLEEGKVVIFAAGTGNPFFTTDTAAALRGAEMNCDVML
                     KATNVDGVYTADPKKDPSATRYETITFDEALNKNLKVMDATAFALCRERKLNIVVFGI
                     AKQGSLKRVITGEDEGTLVHC"
     gene            complement(1079..1933)
                     /gene="tsf"
                     /locus_tag="ACFJAG_000143"
     CDS             complement(1079..1933)
                     /gene="tsf"
                     /locus_tag="ACFJAG_000143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003795802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor Ts"
                     /protein_id="HFC3979556.1"
                     /translation="MAEITAKMVADLRAATGLGMMECKKALVEAEGNFDKAEEILRIK
                     SGAKAGKLAGRTAAEGVLAYAINGNVGALVEVNCETDFVAKDAGFVEFANFVAKTAAE
                     KKPASVEELSELVESERKAIIAKLGENMSVRRFQVIDTANQLVAYIHGALATEGVLVE
                     YKGSEDVARKIGMHIVAAKPQCVSEAEVDAETVEKERHIYTEQAIASGKPADIAAKMI
                     EGRIRKFLAEITLNGQAFVMNPDQTVAQFAKENDTEVVSFIRYKVGDGIEKAVVDYAA
                     EVAAAAKV"
     gene            complement(2062..2790)
                     /gene="rpsB"
                     /locus_tag="ACFJAG_000144"
     CDS             complement(2062..2790)
                     /gene="rpsB"
                     /locus_tag="ACFJAG_000144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HFC3979557.1"
                     /translation="MSQITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLE
                     KTLPMFQEAQEAVRRLVANKGTVLFVGTKRQARDIIREEATRAGMPFVDHRWLGGMLT
                     NYKTVKQSIKRLEEKTAALENAAESGFSKKEILEMQRDVEKLERSLGGIKNMKGLPDA
                     IFVIDTGYQKGTLVEAEKLGIPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIA
                     DAVLEGKNQALQETVAAAQETAAE"
     gene            complement(2963..3196)
                     /locus_tag="ACFJAG_000145"
     CDS             complement(2963..3196)
                     /locus_tag="ACFJAG_000145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979558.1"
                     /translation="MWHIVAIGYLFVAVMYSAAQPSIARALIYLVFWVVLPTVFTVFA
                     VTVRRRNRLMGQQEQAESEQQRAQRQKDSGTKP"
     gene            3274..3855
                     /locus_tag="ACFJAG_000146"
     CDS             3274..3855
                     /locus_tag="ACFJAG_000146"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030272 - 5-formyltetrahydrofolate
                     cyclo-ligase activity [Evidence IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HFC3979559.1"
                     /translation="MRNEEKRALRRELRGRRSQMGRDVRAAAAVKINRLLKRYIKKGR
                     KIGVYWPMGNELRLDGFVRAAQKRGAKLYLPYIEPHTRRMWFTPYPERGMERERKRGG
                     AKLHVPQFAGRKIRVHGLSVLLVPLVGIDREGYRLGQAGGYYDATLSAMKYRLQAKTV
                     GVGFACQLVDRLPREAHDLPLDGFVSEAGILCF"
     gene            3916..4506
                     /locus_tag="ACFJAG_000147"
     CDS             3916..4506
                     /locus_tag="ACFJAG_000147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HFC3979560.1"
                     /translation="MSERIILPVLSLGGVRFEPLDVHHETGLREAVCDGEVWKLGVTS
                     APHPDRVADYIGTALATRLAFAVVDEEADRVVGTTAYYHFEPQIPRLDIGFTWYAASA
                     RRKRINTCCKIMLLDYAFDVLACCCAGWRTDILNLASQRAIERLGAEKDGVLRMHMLR
                     KDGSVRDTVVYSMLREDWCKNREILTGRLAGYGVQV"
     gene            4890..6356
                     /locus_tag="ACFJAG_000148"
     CDS             4890..6356
                     /locus_tag="ACFJAG_000148"
                     /EC_number="1.1.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate:quinone oxidoreductase"
                     /protein_id="HFC3979561.1"
                     /translation="MAEATDVVLVGGGIMSATLGVLLKELEPSWEITLIERLEDVALE
                     SSNAWNNAGTGHSALCELNYAPLGADGVINPARALNIAEQFHVSRQFWATLVAEGKLE
                     DNSFINAVPHMSLVMNEDHCRYLQKRYDVFKTQKLFENMEFSTDRNKISDWAPLIMRG
                     RDENQPVAANYSAEGTDVDFGRLTRQMVKYLQGKGVKTEFNRHVEDIKRESDGAWVLK
                     TADTRNPDWQLTLRTRFLFLGAGGGALTLLQKSGIPEGKGYGGLPVSGLFFRNSNPET
                     AEQHNAKVYGQASVGAPPMSVPHLDTRNVDGKRHLMFGPYAGFRSNFLKQGSFMDLPL
                     SIHMDNLYPMLRAGWANMPLTKYLLGELRKTKEERFASLLEYYPEANPDDWELITAGQ
                     RVQIIKKDSEKGGVLQFGTEIVAHADGSLAALLGASPGASTAVPLMIRLMHQCFPERA
                     PSWEGRLKELVPGYGIKLNENPERADEIIAYTAKVLDI"
     gene            complement(6543..6914)
                     /locus_tag="ACFJAG_000149"
     CDS             complement(6543..6914)
                     /locus_tag="ACFJAG_000149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HFC3979562.1"
                     /translation="MKLLTTAILSSAIALSSMAAAGTDNPTVAKKTVSYVCQQGKKVK
                     VTYGFNKQGLTTYASAVINGKRVQMPINLDKSDNMDTFYGKEGGYVLSTGAMDSKSYR
                     KQPIMITAPDNQIVFKDCSPR"
     gene            complement(7152..7451)
                     /locus_tag="ACFJAG_000150"
     CDS             complement(7152..7451)
                     /locus_tag="ACFJAG_000150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HFC3979563.1"
                     /translation="MKIFENIEDVKAIRKKTGMNQIDFWGKVGVTQSGGSRYETGRKM
                     PKPVRELLRLVHIECLDLAKVNKKDMEIAALLKKHHPDLYAELSKQTKAERKKQG"
     gene            complement(7550..8329)
                     /gene="map"
                     /locus_tag="ACFJAG_000151"
     CDS             complement(7550..8329)
                     /gene="map"
                     /locus_tag="ACFJAG_000151"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HFC3979564.1"
                     /translation="MNGIIIKTPEEIEKMRELGKLVAEALDYIGQFVKPGITTDEIDK
                     LVYDYHVNVQGGYPAPLHYGNPPYPKSCCTSVNHVICHGIPDDKPLKEGDIINIDLTI
                     KKDGFHGDSSRMFTVGKVSPIAQRLIDVTHASMMAGIEAVKPGATLGGVGYACQQVAE
                     NAGYSVVQEFCGHGIGRGFHEAPQVLHYGKKGQGPVLKPGMIFTVEPMINQGKRHLRI
                     LNDGWTVVTKDRSLSAQWEHEVLVTETGYEILTVSPATGKP"
     gene            complement(8369..9019)
                     /locus_tag="ACFJAG_000152"
     CDS             complement(8369..9019)
                     /locus_tag="ACFJAG_000152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979565.1"
                     /translation="MPSEPPSDGIARHPKSTIKMAKKPNKPFRLTPKLLIRAVLLICI
                     TAIGALAVGIVSTFNPNGDKTLQTEPQHTDSPRETEFWLPNGAVGQDAAQPEHHHAAS
                     SEPAQPDGTEESGSGLPPPAAPKKNRVKPRPSDAARAADSLTGTGTQAENTLKETPVL
                     PTNAPHPEPRKETPEKQAQPKETPKEKETPKENHTKPDTPKNTPAKPHKEILDNLF"
     gene            complement(9027..9635)
                     /locus_tag="ACFJAG_000153"
     CDS             complement(9027..9635)
                     /locus_tag="ACFJAG_000153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HFC3979566.1"
                     /translation="MKPKPHTVRTLIAAVLSLALGGCFSAVVGGAAVGAKSVIDRRTT
                     GAQTDDNVMALRIETTARSYLRQNNQTKGYTPQISVVGYNRHLLLLGQVATEGEKQFV
                     GQIARSEQAAEGVYNYITVASLPRTAGDIAGDTWNTSKVRATLLGISPATQARVKIIT
                     YGNVTYVMGILTPEEQAQITQKVSTTVGVQKVITLYQNYVQR"
     gene            complement(9699..10292)
                     /locus_tag="ACFJAG_000154"
     CDS             complement(9699..10292)
                     /locus_tag="ACFJAG_000154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008968 - D-sedoheptulose 7-phosphate
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA];
                     GO_process: GO:1901135 - carbohydrate derivative metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoheptose isomerase"
                     /protein_id="HFC3979567.1"
                     /translation="MTTLQERVAAHFAESIRAKQEAEKILVEPTVQAAELMLQCLMND
                     GKILACGNGGSAADAQHFAAEMTGRFEKERMELAAVALTTDTSALTAIGNDYGFDHVF
                     SKQVRALGRAGDVLVGISTSGNSANVIEAVKAAHERDMHVIALTGRDGGKIAAMLKDT
                     DVLLNVPHPRTARIQENHILLIHAICDCIDSVLLEGM"
     gene            complement(10297..10644)
                     /locus_tag="ACFJAG_000155"
     CDS             complement(10297..10644)
                     /locus_tag="ACFJAG_000155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HFC3979568.1"
                     /translation="MRLNHKQGTAGEDAALAFLQSQGCTLLARNWHCAYGEIDLIVKN
                     GGMILFVEVKYRKNQRFGGAAYSISPSKLLKLQRSVEYYLQQNRLTNVPCRLDAVLIE
                     GNRPPEWIKNITG"
     gene            10691..11566
                     /gene="rsmI"
                     /locus_tag="ACFJAG_000156"
     CDS             10691..11566
                     /gene="rsmI"
                     /locus_tag="ACFJAG_000156"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0000451 - rRNA 2'-O-methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HFC3979569.1"
                     /translation="MFQKHLQKASDSVVGGTLYVVATPIGNLADITLRALAVLQKADI
                     ICAEDTRVTAQLLSAYGIQGRLVSVREHNERQMADKVIGFLSDGLVVAQVSDAGTPAV
                     CDPGAKLARRVREAGFKVVPVVGASAVMAALSVAGVAESDFYFNGFVPPKSGERRKLF
                     AKWVRAAFPVVMFETPHRIGATLADMAELFPERRLMLAREITKTFETFLSGTVGEIQT
                     ALAADGNQSRGEMVLVLYPAQDEKHEGLSESAQNAMKILAAELPTKQAAELAAKITGE
                     GKKALYDLALSWKNK"
     gene            complement(11601..12131)
                     /locus_tag="ACFJAG_000157"
     CDS             complement(11601..12131)
                     /locus_tag="ACFJAG_000157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0022904 - respiratory electron transport
                     chain [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b"
                     /protein_id="HFC3979570.1"
                     /translation="MNTNQPAVYDPLTRALHWLTVAGFIGILTTIVLWTIYEEAEWAG
                     SLFGLHKSFGFLMLTVIALRIVWAVANRAKRPQSDSKAAAAGHGILYLLMLAVPVIGM
                     IRQYGGGRGPLKVFGVEVMQGSPEKIEWMANLGNTFHGNLGWLLFAAVVGHVAMVVVH
                     RVQGKDVLYRMTGRVR"
     gene            12410..13564
                     /gene="obgE"
                     /locus_tag="ACFJAG_000158"
     CDS             12410..13564
                     /gene="obgE"
                     /locus_tag="ACFJAG_000158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HFC3979571.1"
                     /translation="MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGS
                     VWAEADENTNTLVEYRFVKRYQAKNGEKGHGSDRYGAGADDIVLKMPVGTLIRDLDTD
                     EIVADLTYHGQRVCLAKGGKGGLGNIHFKSSVNRAPKQSTPGEEGETRSLQLELKVLA
                     DVGLLGMPNAGKSTLITAVSAARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLI
                     EGAAEGAGLGHRFLKHLSRTGLLLHVVDLAPFDETVNPAEEALAIINELRKYDEELYG
                     KPRWLVLNKLDMLDEEEARARTAAFLEAVGWDYPEPDDRFQFDMETPRLFQISALTHQ
                     GTQELVHQINQYLAEKKRIEAEKAEAEKAAANVEIIEQQPKTDTGVFKPE"
     gene            13618..14565
                     /locus_tag="ACFJAG_000159"
     CDS             13618..14565
                     /locus_tag="ACFJAG_000159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HFC3979572.1"
                     /translation="MYKTIDLFSGIGGIRLGFEKYGCTNVFSSEWDKYARQVYEANFG
                     EKPFGDINGIDPSDIPDHDILLAGFPCQPFSIAGKGLGFEDTRGTLFFNIAEILKTKQ
                     PKAFLLENVKRLTTHDSGRTFRIVLETLKQLGYTVYFKVLNTLDFGLPQKRERIYIVG
                     FSDNIPFYFPEPINQYRPLGELLENDRDVEPSYFLSDTLKQKRLAALKKAPPTPSIWH
                     ENIGGNVSALPYSCALRAGGSYNYLVVNGVRRLTGREMLRLQGFPDDFEINIPYSQVR
                     KVAGNSVSVPVIEAIAENMLASLSGKVEQKGQLDLLEAG"
     gene            14562..15614
                     /locus_tag="ACFJAG_000160"
     CDS             14562..15614
                     /locus_tag="ACFJAG_000160"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HaeII family restriction endonuclease"
                     /protein_id="HFC3979573.1"
                     /translation="MTLEEQQAKEALDGIIKKSRVHLYKPIQIAEILYHDRCIKQLDF
                     LNLDTYRNQSKRWRDEICRRFLGRISTSSAKFQDNLFEKNAIPPEKLAVLGTLNRQSD
                     GGVESYIYKQFFNRFSQMSEALAYVGNTDRYSFQLSEFLNLFWLEPGLKRSIDKIYEI
                     VVYALFDALVSELGITVSIDFPKENLFLWEEYQDFAEKIITMPKNEHLKLPAKIHRVG
                     VTNAADRGLDMWSNFGLAIQVKHLSLDEELAEDIVSSISADRIVIVCKKAEQSVIVSL
                     LTQIGWKSRIQNIVTEDDLISWYEKALRGQYPIAEALLENIKTEIMREFPAVNEANEF
                     LDFAQNRGYDITVTHF"
     gene            15630..17051
                     /gene="cysS"
                     /locus_tag="ACFJAG_000161"
     CDS             15630..17051
                     /gene="cysS"
                     /locus_tag="ACFJAG_000161"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004817 - cysteine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006423 - cysteinyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HFC3979574.1"
                     /translation="MTAIYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVM
                     VVFDMIARWLRECGYPLTYVRNITDIDDKIIARAAENGETIGELNARFIQAMHEDADA
                     LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSL
                     DDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFG
                     DTFDIHGGGADLQFPHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFI
                     RVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTR
                     LYTTLKNTPAAEFDLSENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHL
                     AGCLKALGGIIGLLQRNPIEFLQGGAVSDGLSNEEIEDLIARRKQARADKNWAESDRI
                     RDLLNEHKIILEDSAGGTTWRRG"
     gene            17222..18001
                     /locus_tag="ACFJAG_000162"
     CDS             17222..18001
                     /locus_tag="ACFJAG_000162"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HFC3979575.1"
                     /translation="MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADL
                     SADMKNPHGMHGHWHCAEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFGR
                     LGVISLYLPSGSSAEERQQVKYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLK
                     NWKGNQKNSGFLPEEREWIGKVIHTLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGW
                     RIDYQMVTPELAAKAVSAHVYKDEKFSDHAPLVVEYDYAAE"
     gene            17988..18332
                     /locus_tag="ACFJAG_000163"
     CDS             17988..18332
                     /locus_tag="ACFJAG_000163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979576.1"
                     /translation="MLPNKVLGKYDWNVDGKTGIGAAWVVAAFILPILVWAVFMLSRM
                     QGWLAPTKANPIWALVWLLICLPCLLIAAKCLGWKGWRRVVNIFVCLTVCAILSVPAS
                     LLIAFTLRDLLK"
     gene            18342..18872
                     /locus_tag="ACFJAG_000164"
     CDS             18342..18872
                     /locus_tag="ACFJAG_000164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HFC3979577.1"
                     /translation="MESFELEDLTLWLIRDADEAEMWIDRWAVSYPVVQMSEASANGS
                     TEAWQSALQTVFERIQGRHIAVVAHGAGAAAFLAWLYRADILTQKKLAGIILVSPRPD
                     IFPDDAEHTFQRVRCPCRAALVVSEHGGVPHGWAQKQADLWNARLLVSPHSGSLNGML
                     GGWQWGMKLMQEMLLA"
     gene            complement(18965..20080)
                     /gene="asd"
                     /locus_tag="ACFJAG_000165"
     CDS             complement(18965..20080)
                     /gene="asd"
                     /locus_tag="ACFJAG_000165"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004073 - aspartate-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HFC3979578.1"
                     /translation="MKVGFVGWRGMVGSVLMQRMKEENDFAHIPEAFFFTSSNVGGAA
                     PDFGQAAKTLLDANDVAELAKMDIIVTCQGGDYTKSVFQALRDSGWNGYWIDAASSLR
                     MKDDAIIALDPVNRNVIDNGLKNGVKNYIGGNCTVSLMLMALGGLFQNDLVEWATSMT
                     YQAASGAGAKNMRELISGMGAIHAQVADELADPSSAILDIDRKVSDFLRSEDYPKANF
                     GVPLAGSLIPWIDVDLGNGQSKEEWKGGVETNKILGRSGNPTVIDGLCVRIGAMRCHS
                     QAITLKLKKDLPVSEIEAILAGANDWVKVVPNEKEAGIRELTPAKVTGTLSVPVGRIR
                     KLGMGGEYISAFTVGDQLLWGAAEPMRRVLRIVLGSL"
     gene            20255..20836
                     /locus_tag="ACFJAG_000166"
     CDS             20255..20836
                     /locus_tag="ACFJAG_000166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HFC3979579.1"
                     /translation="MEEKNDYTDAVSDNRNGQEIEVGIAGAGDRILAALLNQLFTFLI
                     LLVPFVGLIAFAVKNEGRIGGREEIFGLLLGMTSFWVGLAGILAYTVIQIYYMSRDGQ
                     SLGKKIMRIRVLKTDGRNPGFVGTVLVREIAWSVLVAIIAAVIGLAVGENGENAINLL
                     AFLANFVLLFMVKRDRRTLYDILADTVVVKLPK"
     gene            complement(20898..21752)
                     /gene="folD"
                     /locus_tag="ACFJAG_000167"
     CDS             complement(20898..21752)
                     /gene="folD"
                     /locus_tag="ACFJAG_000167"
                     /EC_number="1.5.1.5"
                     /EC_number="3.5.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004488 - methylenetetrahydrofolate
                     dehydrogenase (NADP+) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HFC3979580.1"
                     /translation="MSAQLINGKEVSQKHLQAIAEAVAQRQQDNLHTPCLAVVLVGGD
                     PAGAVYVRNKKTACQKCGIKSLSYELPESTSQEELLALVDRLNADSEVDGILVQLPLP
                     KHLDSQAILERISPDKDVDGFHPYNVGRLAVKMPLMRPCTPKGVMTLLEAYGIDPKGK
                     KAVVVGASNIVGRPQALELLLARATVTVCHSATENLADEVAAADILVVGVGIPNFVKG
                     GWIKPGAVVIDVGINRLDDGSLCGDVEFETAKERAAMITPVPGGVGPMTIATLMENTL
                     HAASLHDA"
     gene            21975..22052
                     /locus_tag="ACFJAG_000168"
     tRNA            21975..22052
                     /locus_tag="ACFJAG_000168"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:22010..22012,aa:Pro,seq:tgg)
     gene            22077..22153
                     /locus_tag="ACFJAG_000169"
     tRNA            22077..22153
                     /locus_tag="ACFJAG_000169"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:22111..22113,aa:Arg,seq:tct)
     gene            22181..22256
                     /locus_tag="ACFJAG_000170"
     tRNA            22181..22256
                     /locus_tag="ACFJAG_000170"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:22214..22216,aa:His,seq:gtg)
     gene            22392..22898
                     /gene="rfaE2"
                     /locus_tag="ACFJAG_000171"
     CDS             22392..22898
                     /gene="rfaE2"
                     /locus_tag="ACFJAG_000171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1-phosphate
                     adenylyltransferase"
                     /protein_id="HFC3979581.1"
                     /translation="MVDAWSVPDFESKICPPEALAARLALLPRPLVFTNGCFDILHRG
                     HVTYLAQARSAGAALVLALNTDASVRRLGKGGDRPVNPLENRAAVAAALESVDLVTWF
                     DEDTPAALIEAVKPEVLVKGGDWVVDKIVGAAETLARGGQVFSIPFLHQTSTTKTLAK
                     IRAAEGGK"
     gene            22895..24673
                     /locus_tag="ACFJAG_000172"
     CDS             22895..24673
                     /locus_tag="ACFJAG_000172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional biotin--[acetyl-CoA-carboxylase]
                     ligase/type III pantothenate kinase"
                     /protein_id="HFC3979582.1"
                     /translation="MTVLKPSHWRVLAELADGLPQHVSQLARMADMKPQQLNGFWQQM
                     PAHIRGLLRQHDGYWRLVRPLAVFDAEGLRELGERSGFQTALKHECASSNDEILELAR
                     IAPDKAHKTICVTHLQSKGRGRQGRKWSHRLGECLMFSFGWAFDRPQYELGSLSPVAA
                     LACRRALGCLGLETQIKWPNDLVVGRDKLGGILIETVRAGGKTVAVVGIGINFVLPKE
                     VENAASVQSLFQTASRRGNADAAVLLETLLAELGAVLEQYAEEGFAPFLNEYETANRD
                     HGKAVLLLRDGETVCEGTVKGVDGRGVLHLETAEGEQTVVSGEISLRPDDRPVSVPKR
                     RDSERFLLLDGGNSRLKWAWVENGTFATVGSAPYRDLSPLGAEWAEKADGNVRIVGCA
                     VCGESKKAQVKEQLARKIEWLPSSAQALGIRNHYRHPEEHGSDRWFNALGSRRFSRNA
                     CVVVSCGTAVTVDALTDDGHYLGGTIMPGFHLMKESLAVRTANLNRPAGKRYPFPTTT
                     GNAVASGMMDAVCGSVMMMHGRLKEKTGAGKPVDVIITGGGAAKVAEALPPAFLAENT
                     VRVADNLVIHGLLNLIAAEGGESEHA"
     gene            24786..25610
                     /locus_tag="ACFJAG_000173"
     CDS             24786..25610
                     /locus_tag="ACFJAG_000173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HFC3979583.1"
                     /translation="MKWLFTLLAVLNIAVFGGTVGYKLAVKAAGGVPENRAVENTPPA
                     TPAAGNAAASVEDTAALLKPGDILSEEQAEQLRLKKEAEQKKLREKKQREEKARREKL
                     AAEKAQAERENGAADALCAAQASLTMDEDDYHRIKGLLGKWSHVASRSVEKRTAKAKP
                     ADKTYRVVLPVSADAENQAAELSAKGFNPIPFDGALSLGVGNSRENAQALQNRLADAG
                     FGGAHIVEHFAEADRQDDSLSVSRMTVLFTGVNAADADEIRKITSLYGKLNLKSCK"
     gene            complement(26116..26328)
                     /locus_tag="ACFJAG_000174"
     CDS             complement(26116..26328)
                     /locus_tag="ACFJAG_000174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol phosphate phosphatase"
                     /protein_id="HFC3979584.1"
                     /translation="MPSEGFRRHRGPKRANRHSPASRLCREEQGNRPENLAARPDTAT
                     NETPGLPGAQAAAQALSTAIEGCFVV"
     gene            complement(26343..27131)
                     /locus_tag="ACFJAG_000175"
     CDS             complement(26343..27131)
                     /locus_tag="ACFJAG_000175"
                     /EC_number="2.8.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1990107 - thiazole synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HFC3979585.1"
                     /translation="MLTLYGETFPSRLLLGTAAYPTPEILKQSVRTARPAMITVSLRR
                     TGCSGEAHGQGFWSLLQETGVPVLPNTAGCQSVQEAVTTAQMAREVFETDWIKLELIG
                     DDDTLQPDVFQLVEAAEILIKDGFKVLPYCTEDLIACRRLLDAGCQALMPWAAPIGTG
                     LGAVHAYALKILRERLPDTPLIIDAGLGLPSQAAQVMEWGFDGVLLNTAVSRSGDPVN
                     MARAFALAVESGRLAFEAGPVEARTKAQASTPTVGQPFWHSAEY"
     gene            complement(27210..27404)
                     /gene="thiS"
                     /locus_tag="ACFJAG_000176"
     CDS             complement(27210..27404)
                     /gene="thiS"
                     /locus_tag="ACFJAG_000176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur carrier protein ThiS"
                     /protein_id="HFC3979586.1"
                     /translation="MNIILNGGPAELHGTSVADLIAQTAPQKPFAVAVNTVFIPKGAY
                     AETVLHENDKIDIVRPVVGG"
     gene            complement(27826..28443)
                     /gene="thiE"
                     /locus_tag="ACFJAG_000177"
     CDS             complement(27826..28443)
                     /gene="thiE"
                     /locus_tag="ACFJAG_000177"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004789 - thiamine-phosphate
                     diphosphorylase activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HFC3979587.1"
                     /translation="MTFPPLKSLLKFYAVVPTADWVGRMVKAGADTVQLRCKTLHGNE
                     LKREIARCVAACQGSRTQLFINDHWREAIEAGAYGVHLGQEDMDTADLAAIAAAGLRL
                     GLSTHSVAELDRALSVHPGYIASGAIFQTTTKQMPTAPQGLDKLREYVEQARGTPVVA
                     IGGIDLNNARAVLATGVSSLAAVRAVTEAANPEAVVKAFQALWDG"
     gene            complement(28465..29565)
                     /locus_tag="ACFJAG_000178"
     CDS             complement(28465..29565)
                     /locus_tag="ACFJAG_000178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HFC3979588.1"
                     /translation="MTRIAVLGGGLSGRLTALQLAEQGYQIELFDKGTRQGEHAAAYV
                     AAAMLAPAAEAVEATPEVIRLGRQSIPLWRGIRCRLNTLTMMQENGSLIVWHGQDKPL
                     SSEFVRHLKRGGVADDEIVRWRADEIAEREPQLGGRFSDGIYLPTEGQLDGRQILSAL
                     ADALDELNVPCHWEHECAPQDLQAQYDWVIDCRGYGAKTAWNQSPEHTSTLRGIRGEV
                     ARVYTPEITLNRPVRLLHPRYPLYIAPKENHVFVIGATQIESESQAPASVRSGLELLS
                     ALYAVHPAFGEADILEIAAGLRPTLNHHNPEIRYSRERRLIEINGLFRHGFMISPAVT
                     AAAVRLAVALFDGKDAPERDEESGLAYIGRQD"
     gene            complement(29562..30788)
                     /gene="cytX"
                     /locus_tag="ACFJAG_000179"
     CDS             complement(29562..30788)
                     /gene="cytX"
                     /locus_tag="ACFJAG_000179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003519479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative hydroxymethylpyrimidine transporter
                     CytX"
                     /protein_id="HFC3979589.1"
                     /translation="MSGNASSPSSSAAIGLIWFGAAVSIAEISTGTLLAPLGWQRGLA
                     ALLLGHAVGGALFFAAAYIGALTGRSSMESVRLSFGKCGSVLFSVANMLQLAGWTAVM
                     IYVGATVSSALGKVLWDGESFVWWALANGALIVLWLVFGARRTGGLKTVSMLLMLLAV
                     LWLSVEVFASSGTNAAPAVSDGMTFGTAVKLSAVMPLSWLPLAADYTRQARRPFAATL
                     TATLAYTLTGCWMYALGLAAALFTGETDVAKILLGAGLGITGILAVVLSTVTTTFLDT
                     YSAGASANNISARFAEIPVAVGVTLIGTVLAVMLPVTEYKNFLLLIGSVFAPMAAVLI
                     ADFFVLKRREEIEGFDFAGLVLWLAGFILYRFLLSSGWESSIGLTAPVMSAVAIATVS
                     VRLFFKKAQSLQRNPS"
     regulatory      complement(30854..30958)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            31033..32517
                     /gene="tldD"
                     /locus_tag="ACFJAG_000180"
     CDS             31033..32517
                     /gene="tldD"
                     /locus_tag="ACFJAG_000180"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease TldD"
                     /protein_id="HFC3979590.1"
                     /translation="MPYNQAPDFLCADTMHPTYSAVQARLLEANRLCPELLAKSLCII
                     GAHHVDYADIYCQRTAYESWHLEEGIVKSGSFQIDQGVGVRAVSGDKTAFAYADSLCI
                     DSINRSARAVRAIGAAGGKVSAKMPSETRGKPVCSASDPIAGLDSAAKVALLNKVEAI
                     AKAADPRIVQVMAGLTCEYDMVYLARLDGKHAADIRPMVRLNVTVIAKQGERREQGGA
                     GGGGRYDLAYFDETLVRQFVDAAVKQALTNLESRPAPAGEMTVVLGNGWPGVLLHEAV
                     GHGLEGDFNRKGTSVFSGRIGERVAAKGVTVVDQGDIAGRRGSLNIDDEGNETRRTVL
                     IEDGILVGYMQDETNARLTGTQSTGNGRRQSYASVPMPRMTNTFMENGSYEPEEIIAS
                     IDKGIYAVNFGGGQVDITSGKFVFGASEAWWVEGGRLQYPVKGATIIGNGPEVLKHVS
                     MIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAGLTVGGSAI"
     gene            32661..33320
                     /locus_tag="ACFJAG_000181"
     CDS             32661..33320
                     /locus_tag="ACFJAG_000181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HFC3979591.1"
                     /translation="MNWPYLIDAVPKFADAAKLTLELSVYGVVLSLLFGLPVAVVTAY
                     RIRPFYALARAYIELSRNTPLLIQLFFLYYGLPKMGIKWDGFTCGVIALVFLGASYMA
                     EAVRAGILAVPKGQVGAGKAIGLSRFQVFRYVELPQVWAVAVPAIGANILFLMKETSV
                     VSTVGIAELLFVTKDVIGMDYKTNEALFLLFAAYLIILLPVSLLARRIENRVRSAKYG
                     V"
     gene            33310..33978
                     /locus_tag="ACFJAG_000182"
     CDS             33310..33978
                     /locus_tag="ACFJAG_000182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HFC3979592.1"
                     /translation="MAFEWLFEGKNAARLGEGLLLTAQISLISVAASCVLGTLFGLVL
                     RSRNRLVRFVGRFYLETIRIVPILVWLFGLYFGLSVWTGIHIGGFWVCVWVFSLWGVA
                     EMGDLVRGALESIEKHQVESGLAPGLSRGQVFRCIELPQSIRRVLPGAVNLFTRMIKT
                     SSLAWLIGVIEVVKVGQQIIENSLLTQPNASFWVYGLIFMLYFFCCWPLSLLAAKLEQ
                     KWEH"
     gene            33980..34711
                     /locus_tag="ACFJAG_000183"
     CDS             33980..34711
                     /locus_tag="ACFJAG_000183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HFC3979593.1"
                     /translation="MALLSIRKLHKQYGSVTAIQFLDLDLEKGEVIVLLGPSGCGKST
                     LLRCVNGLEPHQGGSIVMDGVGEFGKDVSWQTARQKVGMVFQSYELFAHMTVIENILL
                     GPVKVQNRDRAEAEAQAGKLLERVGLLDRKNAYPRELSGGQKQRIAIVRALCLNPEVI
                     LLDEITAALDPEMVREVLEVVLELAREGMSMLIVTHEMGFARKVADRIVFMDKGGIVE
                     SSDPETFFSAPKSERARQFLAGMDY"
     gene            34824..35678
                     /locus_tag="ACFJAG_000184"
     CDS             34824..35678
                     /locus_tag="ACFJAG_000184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HFC3979594.1"
                     /translation="MKLNAKLKALLASAAIAVGLTACGGGSGDAQSSQSSGAATVAAI
                     KEKGVIRIGVFGDKPPFGYVDANGKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANR
                     VEYVRSGKVDLILANFTQTPERAEAVDFADPYMKVALGVVSPKNKPITDMAQLKDQTL
                     LVNKGTAADAFFTKSHPEVKLLKFDQNTETFDALKDGRGVALAHDNALLWAWAKENPN
                     FEVAIGNLGPAEFIAPAVQKGNADLLNWVNGEIAAMKKDGRLKAAYEKTLLPVYGEKV
                     KPEALLAE"
     gene            36094..36915
                     /gene="prmC"
                     /locus_tag="ACFJAG_000185"
     CDS             36094..36915
                     /gene="prmC"
                     /locus_tag="ACFJAG_000185"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HFC3979595.1"
                     /translation="MTFDEWLGLSKLPKIEARMLLQYVSEYTRVQLLTRGGEEMPDEI
                     RQRADRLAQRRLNGEPVAYILGVREFYGRRFTVNPNVLIPRPETEHLVEAVLARLPEN
                     GRVWDLGTGSGAVAVTVALERPDAFVRASDISTPALETARKNAADLGARVEFAHGSWF
                     DTDMPSERQWDIIVSNPPYIENGDKHLSQGDLRFEPQIALTDFSDGLSCIRTLAQGAP
                     DRLAEGGFLLLEHGFDQGAAVRGVLAENGFSGVEILPDLAGLDRVTLGKYMKHLK"
     gene            37001..38389
                     /locus_tag="ACFJAG_000186"
     CDS             37001..38389
                     /locus_tag="ACFJAG_000186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter family protein"
                     /protein_id="HFC3979596.1"
                     /translation="MNAVVVAVIVMLVLSLSRVHVVLSLTVGAFVGGAVAGMPLQNIA
                     DAAGQVSQAGIIPVFNKGLEGGAKIALSYAMLGAFAMAITHSGLPQQLAGAVVRKLNR
                     GGMPDSVRSGEGAVKWLLLSIILVMGIMSQNVIPIHIAFIPMIVPPLLLVFNRLKIDR
                     RLIACVITFGLVTTYMFLPYGFGAIFLNEILLGNIHSAAPQLDVKNINVMAAMAIPAL
                     GMLAGLLLAFVHYRKPRLYQSNNADTAGNADAANRPQPSAYRSLVAAAAIAVCFAIQL
                     MYEDSLVLGAMLGFAVFMMLGVINRDKANDVFGEGIKMMAMVGFIMIAAQGFAAVMNA
                     TGHIQPLVESSMAIFGNSKGMAALAMLVVGLLVTMGIGSSFSTLPIIAAIYVPLCTGL
                     GFSPLATAAIVGTAGALGDAGSPASDSTLGPTMGLNADGRHDHIRDSVIPTFIHYNIP
                     LLIAGWIAAMVL"
     gene            38390..38614
                     /locus_tag="ACFJAG_000187"
     CDS             38390..38614
                     /locus_tag="ACFJAG_000187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SlyX family protein"
                     /protein_id="HFC3979597.1"
                     /translation="MDAVQELERRIVELEIQTALQEDVISGLNAMVAELRQTLDLQQA
                     QLRLLYQKMQDRNPDAQEPYSLRDEIPPHY"
     gene            complement(39014..39907)
                     /locus_tag="ACFJAG_000188"
     CDS             complement(39014..39907)
                     /locus_tag="ACFJAG_000188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ThiF family adenylyltransferase"
                     /protein_id="HFC3979598.1"
                     /translation="MPHPCQTVHTLTTHVPKCRLKLNAARRRRYNRPQLFFPNIIMTA
                     TEHDNDDALLLRYSRHILLDEIGIEGQQKLSAAHILVVGCGGLGAAALPYLAASGVGT
                     LTIADSDTVELHNLQRQVAFDEGDVGKPKAETLAGRLKRINHTVDVRAVNEKLDGCRL
                     TGLVQTADIVLDCCDNYATRQAVNRACVQTKTPLVSGAAVRFEGQLAAYRPDLPDSPC
                     YACLFDGGSASDGICSLFGVLSPLVGIVGCTQAAEALKILLEAGEPSHGRLAVYRALE
                     GGWQYFDLPRNPECPVCGAAR"
     gene            39950..42652
                     /gene="ppc"
                     /locus_tag="ACFJAG_000189"
     CDS             39950..42652
                     /gene="ppc"
                     /locus_tag="ACFJAG_000189"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008964 - phosphoenolpyruvate carboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA];
                     GO_process: GO:0015977 - carbon fixation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HFC3979599.1"
                     /translation="MQLHILNNPKDAALAADAEFLKQSLFNLLHEEASPLVVETVKLL
                     STSDDSAALIEKVLPQLDERQTYDLTLACGLFAQILNIAEDVHHERRRQIHEDAGHNA
                     AEGSLTETVRRLKAGKADGKSVQRQLDNTSVTAVLTAHPTEVQRQTVLNFNRRIRALL
                     PQRERCTNADALARLRREIDTVLLGLWQTSETRRHKLSVNDEINNGVSIFPMSFFEAL
                     PKLYRKMEHDFQTAYPDVRVPNILKIGGWIGGDRDGNPFVSGETLRFAFRRHADAVFR
                     FYRSELDKLYRELPLSIRRVKVNDDVMALAALSPDEEIARTEEPYRRAIAYIMARAMG
                     KARSLGLGMGCKFGFLEPYASAQKFLDDLKKLQRSLIDNGSRLLAEGRLADLIRSVSV
                     FGFHMMPLDLRQHAGKHADVVAELFQHAGLEDYNSLNEEQKQAALLRELSHQRPLYSP
                     FITYSDHTRRELAIFNEARKIKDEFGEDALTQSIISNCEQPGDLLALALLLKESGLLA
                     VENGKPHSRINIVPLFETIEALENACPVMETMFRLDWYDALLESRGNIQEIMLGYSDS
                     NKDGGYVTSSWCLHQAELGLVELFKKYDVRMRLFHGRGGSVGRGGGPSYQAILAQPAG
                     SVAGQIRITEQGEVITAKYADPGNAQRNLETLVAATLEASILPDKKDPDAKLMQALSD
                     VSFKYYRELITHPDFIDYFLQTSPIQEIATLNLGSRPASRKTLARIQDLRAIPWVFSW
                     MQNRLMLPAWYGFGSAVETLCEGSPETLAALRGHAQNNPFFQAMLSNMEQVMAKTDIT
                     LAENYAGLSESPEKAKVIFGMIKEEYRRSRKALLDLLQTEELLRDNRSLARSLALRIP
                     YLNALNGLQVAMLKRLRKEPDNPHALLMVHLTINGVAQGLRNTG"
     gene            42775..43764
                     /locus_tag="ACFJAG_000190"
     CDS             42775..43764
                     /locus_tag="ACFJAG_000190"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009331 - glycerol-3-phosphate
                     dehydrogenase (FAD) complex [Evidence IEA];
                     GO_function: GO:0047952 - glycerol-3-phosphate
                     dehydrogenase [NAD(P)+] activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0046167 - glycerol-3-phosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HFC3979600.1"
                     /translation="MKITVIGAGSWGTALALHFSQHGNRVSLWTRNADQVRQMQEARE
                     NKRGLPGFSFPETLEVCADLAEALKDSGLVLIVTSVAGLRSSAELLKQYGAGHLPVLA
                     ACKGFEQDTGLLTFQVLKEVLPDNKKIGVLSGPSFAQELAKQLPCAVVLASENQEWIE
                     ELVPQLNTTVMRLYGSTDVIGVAVGGSVKNVMAIATGLSDGLEYGLNARAALVTRGLA
                     EITRLASAMGAQPKTMMGLAGIGDLILTCTGALSRNRRVGLGLAEGKELHQVLVEIGH
                     VSEGVSTIEEVFNTACKYQIDMPITQTLLQLIRKEMTPQQVVERLMERSARFE"
     gene            43818..44147
                     /locus_tag="ACFJAG_000191"
     CDS             43818..44147
                     /locus_tag="ACFJAG_000191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979601.1"
                     /translation="MKQNIEKLESSVYTLVQKFETLVSENRRLKETVAELERAHERQK
                     LEHETAVDELSEALLVQVGKLKEDLQNKIDSLTEENARYRALLEQSREKISALAARLP
                     QRQETQQ"
     gene            44158..44463
                     /locus_tag="ACFJAG_000192"
     CDS             44158..44463
                     /locus_tag="ACFJAG_000192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HFC3979602.1"
                     /translation="MNIEQVYIEVMHARLTVNTPAEEKDTLLQAVGMLNGKAEAIREG
                     GRVADSEKIVIMAALNVVHDLLKTSLNGGDLAIGDFARKITDMDNACQKALSRLGQE"
     gene            44469..44648
                     /gene="ssrS"
                     /locus_tag="ACFJAG_000193"
     ncRNA           44469..44648
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="ACFJAG_000193"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            44826..45257
                     /gene="rplM"
                     /locus_tag="ACFJAG_000194"
     CDS             44826..45257
                     /gene="rplM"
                     /locus_tag="ACFJAG_000194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007343693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HFC3979603.1"
                     /translation="MKTFSAKPHEVKREWFVIDAQDKVLGRVATEVASRLRGKHKPEY
                     TPHVDTGDYIIVINADKLRVTGAKFEDKKYFRHSGFPGGIYERTFREMQDQFPGRALE
                     QAVKGMLPKGPLGYAMIKKLKVYAGAEHAHAAQQPKVLELK"
     gene            45270..45662
                     /gene="rpsI"
                     /locus_tag="ACFJAG_000195"
     CDS             45270..45662
                     /gene="rpsI"
                     /locus_tag="ACFJAG_000195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019958115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HFC3979604.1"
                     /translation="MNGKYYYGTGRRKSSVARVFLTKGTGQIIVNGRPVDEFFARETS
                     RMVVRQPLVLTENAESLDIKVNVVGGGETGQSGAIRHGITRALIDFDAALKPALSQAG
                     FVTRDAREVERKKPGLRKARRAKQFSKR"
BASE COUNT        10350 a        12119 c        13130 g        10571 t
ORIGIN      
        1 agtggattaa atttaaaccg gtacggcaag gcgaggcaac gccgtaccgg tttaaattta
       61 atccactata atctccatat aataaatggc tgtctgaagc ccatatgcga ctatatctgc
      121 cgaccctatg gtcaatcatc aatcagcagt ggaccagtgt gccttcgtct tcgccggtaa
      181 tgacgcgttt gagcgagcct tgtttggcga tgccgaagac gacgatattg agcttgcgtt
      241 cgcggcagag ggcaaaggcg gtcgcgtcca tgactttgag gtttttattc aaggcttcgt
      301 caaaagtaat ggtttcgtag cgtgtggcgg acgggtcttt tttcgggtct gcggtgtaca
      361 cgccgtcgac gttggtggct ttgagcatca cgtcgcagtt catttccgcg ccgcgcaatg
      421 cggcggcagt gtcggtcgtg aagaacggat taccggtacc ggcggcgaaa atcacgactt
      481 tgccttcttc caaatattga atggctttag gacgggcgta agtttcagcg atttgctgca
      541 tagacagtgc ggattgtacg cgcgctttga tgcccaaggt ttcaaatgcg tctttgagtg
      601 ccaaggcgtt catcacggtc gccatcatgc ccatgtagtc ggcagtggcg cggtccatgc
      661 tgcctgcttg tgcagatacg ccgcggaaaa tgttaccgcc gccgacaacg ataccgactt
      721 gcacacccat tttcacgatt tcggcaattt cgccgacagt ttgaacaatg gtatcgtgat
      781 tgatgccgaa cggatcggaa cccatcaggg attcgccgga gagtttcagt aatacgcgtt
      841 tgtatttgat ttgctgtgtc atgggatacc ttgctttctt gaatgtcgtc ggtcggagtt
      901 gggacgtctg aatttcaaat ggtcggatta caatgatatg gtgtgtcgtt ctattattgt
      961 tttgttttca gacggccttt atattcggtc gtcttaaaat aggtaccgta aacggttttc
     1021 tcaaaaaaaa gcaccctgat tcgtttggaa tccaggtgct ttctttttca taagtgcctt
     1081 acactttggc ggctgcggct acttcggctg cgtagtcgac aacggctttc tcgataccgt
     1141 cgcctacttt gtagcggatg aagctaacca cttcagtgtc gttttcttta gcgaattggg
     1201 caacagtttg gtcagggttc atcacgaatg cttggccgtt cagagtgatt tcagccaaga
     1261 atttgcggat acggccttca atcattttag cggcgatgtc agcaggtttg ccggaagcga
     1321 tggcttgctc ggtgtagatg tggcgttctt tttcaacggt ttcagcatct acttcggctt
     1381 cgcttacgca ttgcggtttg gcggcaacga tgtgcatacc gattttgcgt gctacatctt
     1441 cagagccttt gtactcgacc aaaacgcctt cggtcgccaa tgcgccgtgg atgtaggcaa
     1501 ccagttggtt ggcagtgtca atcacttgga agcggcggac agacatgttc tcgcccaatt
     1561 tagcgatgat ggctttgcgt tctgattcaa ccagttcgct cagttcttca acagaagccg
     1621 gttttttctc ggcagcagtt ttcgcaacga agttggcaaa ttctacgaag ccggcgtctt
     1681 tagcaacgaa gtcggtttcg cagtttactt cgaccaatgc gccgacatta ccgttgattg
     1741 cataagccaa tacgccttcg gcagcagtac ggccagccag tttgcccgct ttcgcaccgg
     1801 atttaatacg caggatttct tcggctttgt cgaagttgcc ttcagcttca accaaggctt
     1861 ttttgcattc catcataccc aggccggtag cggcgcgcag gtcggcaacc atttttgcag
     1921 taatttctgc cattttgaat ctcctagatt tttgggaaat acggaaagga ttttccacat
     1981 tcgggaatcg tgtgccgcga acgggcgttc agacggcata tttgagaaaa ggggcataac
     2041 gcccctcttc tgtgtaccga attactcggc agcggtttct tgggcagcgg ctacggtttc
     2101 ttgcagcgct tggtttttgc cttccaaaac tgcgtcggcg atgcctcggc agtacaggcg
     2161 gatggctttg gcggagtcgt cgttgccggg gatgacgtat ttcacgccgt ctgggctgtt
     2221 gttggtatcg actacggcga taacggggat gcccagtttt tcagcctcaa ccaaagtacc
     2281 tttttggtag ccggtatcga taacgaaaat cgcgtcgggc aggcctttca tgtttttgat
     2341 accgcccaaa gagcgttcca gtttttcaac gtcgcgttgc atttccagaa tttctttttt
     2401 gctgaaaccg ctttcggcag cattttccaa ggctgcggtt ttttcttcca ggcgtttgat
     2461 ggattgctta acggttttgt agttggtcag cataccgccc aaccagcggt ggtcgacgaa
     2521 aggcataccg gcgcgggtcg cttcttcgcg gatgatgtcg cgtgcctggc gtttggtacc
     2581 tacgaacaat accgtacctt tgttggcaac cagacgacgt acggcttctt gcgcctcttg
     2641 gaacatcggc agggtttttt ccaagtttac gatatggatt ttgttgcgcg cgccgaaaat
     2701 gtattgagcc attttcgggt tccagaaacg ggtttggtga ccgaagtgaa caccggcttc
     2761 aatcatctga cgcatagtaa tttgagacat gttatttcct tgaaagggtt aaagagcaca
     2821 cattcaatcg catagaactt gataggcggc gcctattgtc aagcaccctt cggcgaaagt
     2881 gggcataagt tttaaaaata gtgtgtttcc gaaatggaaa actgacggat tatagcggat
     2941 aagatgccgt ctgaaaaggg attcagggtt ttgtgccgct gtctttttgc cgttgtgcgc
     3001 gctgctgttc ggattctgcc tgttcctgct gccccatcag gcggttgcgg cggcggacgg
     3061 ttacggcgaa gaccgtgaac acggtgggca gaaccaccca aaaaaccaaa taaatcaaag
     3121 cgcgcgcaat actcggctgc gcggcggaat acataacggc aacaaaaaga tagccgatgg
     3181 cgacgatgtg ccacattgtg tgcgtcctgt ttgaatgtta acaaaatcgt tataatcgca
     3241 acattctacc gcaatcctga aaggccgtct gaaatgagga acgaggaaaa acgcgccctg
     3301 cgccgcgaat tgcgcgggcg gcgttcgcaa atggggcggg acgtgcgggc ggcggcggcg
     3361 gtaaaaatca accgcctgct caaacgttat atcaaaaagg ggcggaagat cggcgtgtat
     3421 tggccgatgg gcaacgagct gcgtttggac ggctttgtcc gcgcggcgca aaaacgcggc
     3481 gcaaaactct atctgcctta tatcgaaccg cacacgcggc ggatgtggtt tacgccgtat
     3541 cctgaacgcg gaatggaacg ggaacgcaag cgcggtgggg cgaagctgca tgtccctcag
     3601 tttgcagggc gcaaaatccg cgtgcacggt ttgtcggtat tgctcgtccc gcttgtcggc
     3661 atagaccgcg aaggctaccg tttggggcag gcaggcggct attacgatgc gacgctttcg
     3721 gcgatgaaat accgtttgca ggcgaaaacc gtgggcgtgg gctttgcctg ccagttggtg
     3781 gacaggctcc cacgcgaggc gcacgacctg ccgctggacg gttttgtatc ggaagcgggg
     3841 atattgtgtt tttagccgtt cagacggcat ttcgggcgga aatgccgtct gaaggcggaa
     3901 tattgggaga aaaggatgtc ggaaaggata atactgccgg ttttgtcatt gggcggcgta
     3961 cggttcgaac cgttggatgt gcatcatgaa acgggtttgc gcgaggcggt ttgcgatggg
     4021 gaggtttgga agctgggggt aacgtccgcg ccccatccgg atagggtggc agactatatc
     4081 gggacagcat tggcaacgcg tttggcgttt gcggttgtcg atgaagaggc ggacagggtg
     4141 gtcgggacaa cggcgtatta tcattttgaa ccgcagattc cgcgtttgga tatcggattc
     4201 acatggtatg cggcatcggc acggcggaaa cggataaaca cctgttgcaa aatcatgctg
     4261 ttggattacg catttgatgt tttagcttgc tgttgcgcgg gatggcgcac ggatattctg
     4321 aaccttgcct cgcaacgtgc catcgaacgg ctgggcgcgg aaaaagacgg cgtgctgcgt
     4381 atgcatatgc tccgtaaaga cggcagtgtg cgcgatacgg ttgtgtacag tatgctgagg
     4441 gaagattggt gcaaaaacag ggaaatcctg accggcaggt tggcagggta tggcgtgcag
     4501 gtgtgaggca gtattctcaa atttaaaaaa cttaacgcga tatgctgaca atcttttaaa
     4561 aattaatata taaacaattt tgattttttg tctattaaaa atttgatata tatagataaa
     4621 taactatttt tattttttgt ttcgcagttc cccggcttgg cgggcgacag aaaaactttg
     4681 catttcccag taaaatccac tacattcacg ataacatatt acaagcccct gaagcggtgt
     4741 cggaagccat acttgcaacg cattccaacc ccgaaacagc gtgctcggac acacaccatt
     4801 gccggtttcc cctgcttttg cgattcaggc gtttgtagta cggcaaataa ccataagggc
     4861 agaagatgcc tgttttttag gagtaaacca tggctgaagc gacagacgtt gtcttggtgg
     4921 gcggcggcat tatgagcgcg actttgggcg ttttgctcaa agaactcgaa ccgtcttggg
     4981 aaatcaccct gattgaacgc ttggaagatg tggcgttgga atcgtcaaac gcgtggaaca
     5041 acgccggcac ggggcattcc gcgctgtgcg aattgaacta tgcgccgctg ggtgcggacg
     5101 gcgtcatcaa tccggcgcgc gccctgaata ttgccgaaca gtttcatgtc agccgccagt
     5161 tttgggcgac gctggtcgcg gaaggcaagt tggaagacaa ttccttcatc aatgccgtgc
     5221 cgcatatgtc tttggtgatg aacgaagacc actgccgtta cctgcaaaaa cgctatgatg
     5281 tgtttaaaac gcagaaactt tttgaaaata tggaattttc caccgatcgg aacaaaattt
     5341 ccgattgggc tccgctgatt atgcgcggcc gggacgaaaa ccaacccgtc gccgccaact
     5401 attccgccga aggcacggat gtcgatttcg gacggctgac gcgccagatg gtgaaatatt
     5461 tgcagggcaa gggcgtaaaa accgagttca accgccacgt cgaagacatc aaacgcgaat
     5521 ccgacggcgc gtgggtgctc aaaaccgccg atacccgcaa cccagactgg cagcttaccc
     5581 tccgcacccg cttcctcttc ctcggcgcgg gcggcggcgc actgaccctg ctgcaaaaat
     5641 ccggcatccc cgaaggcaaa ggctacggcg gcttacccgt gtccggcctg ttcttccgca
     5701 acagcaaccc cgaaaccgcc gaacaacaca acgccaaagt gtacgggcag gcttccgtcg
     5761 gcgcgccgcc gatgtccgtc ccgcacctcg acacacgcaa cgtagacggc aaacgacacc
     5821 ttatgttcgg tccttacgca ggtttccgtt ccaacttcct caagcaaggc tcgtttatgg
     5881 atttgccgct gtccatccat atggacaacc tctatcctat gctgcgcgcc ggctgggcga
     5941 atatgccgct gaccaaatac ctgctgggcg aattgcgtaa aaccaaagaa gaacgctttg
     6001 cctccctgct ggaatactac cccgaggcaa accccgacga ctgggaactc atcaccgcag
     6061 ggcaacgcgt ccaaatcatt aaaaaagact ccgaaaaagg cggcgtgctg cagtttggta
     6121 cggagattgt cgcccacgcc gacggctcgc tcgccgcatt gctgggagcg tcgccgggcg
     6181 catcgaccgc tgtgccgctg atgatccggc tgatgcacca atgcttcccc gagcgcgccc
     6241 cgtcttggga aggtcgtctg aaagagctgg taccgggtta cggcatcaag ttgaacgaaa
     6301 accctgaaag ggcggatgaa attatcgcct ataccgcgaa agtgttggat atttaaaccg
     6361 aatctttcaa gaaaagccgt acccccatat ggtgttgaca ccgtccctgc cggttatgcc
     6421 cttcatccgg cagggcaggt tttgatacac ggggcaggta atcgtttttt cccttttgcg
     6481 aataatggaa cggtcaaaaa acagcgtttt cagaaatgaa aacgctgttt tttgttgcct
     6541 gattaacgtg gggaacagtc tttgaagacg atttggttgt caggtgcggt aatcataata
     6601 ggctgtttgc ggtaggattt gctgtccatt gcgccggtgc tcagcacata accgccttct
     6661 ttgccgtaga acgtgtccat attgtcggat ttatccaaat tgatgggcat ttgcacacgt
     6721 ttgccgttga tgacggcgga ggcgtatgtg gtcagaccct gtttgttgaa gccgtaggtt
     6781 actttgactt ttttaccttg ctggcagacg tagctgacgg tttttttggc aacggtgggg
     6841 ttgtccgtgc cggcggcggc catactgctg agcgcgattg cggaagacag gattgcagtg
     6901 gtcagaagtt tcatttttat tcctttggat agatgtggag tttgcccgtt tcggactgtt
     6961 tgacagtcta atgtcggcgt atcctgaaat aaacaggaaa ttggataaag tttgtaaaaa
     7021 ggcaggttcg ggcggttcgg cggtttgagg caggggcggc aggcgggata cggcggcctg
     7081 tccggtgttt cagacggcat tgtttgcatt tttcggaaat gaaaaacctc cgggcatccg
     7141 gaggttgcgg tttaaccttg tttttttctt tcggccttgg tctgtttgga caattcggca
     7201 tacaggtcgg gatggtgttt tttcaacagg gcggcgattt ccatatcttt tttgttgact
     7261 tttgccaaat cgaggcattc gatatggacg aggcggagca gttcgcgtac gggtttgggc
     7321 atcttgcggc cggtttcgta gcgtgaacct ccggattgag taacgccgac cttgccccag
     7381 aagtctatct ggttcatccc ggtcttttta cggatggctt taacatcttc tatattttca
     7441 aatattttca taaaacttcc tttaagtttt tctggttgcg gggcaaattc cgatttgctt
     7501 tgttttcgta atgtgccggg tcaagcctgt ttttatattg catacagctt cagggtttgc
     7561 cggtggcggg gctgacggtg aggatttcgt agccggtttc ggttaccaag acttcgtgtt
     7621 cccattgggc ggagagggag cggtctttgg taaccaccgt ccagccgtcg ttgaggatac
     7681 gcaggtggcg tttgccttgg ttgatcatcg gttcgacggt aaaaatcata cccggtttta
     7741 gaacgggacc ctgccctttt tttccgtagt gcaacacttg cggggcttcg tggaaaccgc
     7801 gcccgatgcc gtgtccgcag aattcttgta caaccgaata acctgcattt tcggcaacct
     7861 gttggcaggc gtaacctacg ccgcccagcg tcgcgccagg tttgacggct tctatgcccg
     7921 ccatcataga ggcgtgggtt acgtcgatca ggcgttgggc gatgggggag actttgccga
     7981 cggtaaacat acggctggag tcgccgtgga aaccgtcttt tttgatggtg aggtcgatgt
     8041 tgataatgtc accttctttg agcggcttgt cgtcgggaat gccgtggcag atgacgtggt
     8101 tgacggaggt gcagcaggat ttggggtagg gcgggttgcc gtagtggagg ggggcgggat
     8161 agccgccttg gacgttgacg tggtagtcgt aaacaagttt gtcgatttcg tcggtggtga
     8221 tgccgggttt gacgaattgt ccgatgtagt cgagggcttc ggcgacgagt ttgcccagct
     8281 cgcgcatttt ttcgatttct tcgggggttt tgatgatgat gccgttcata atgcttcctt
     8341 ggattgcggg tgtgcctgcc gtgccgggtc aaaagaggtt gtcgagaatc tctttatggg
     8401 gtttggccgg cgtgtttttc ggggtgtccg gtttggtatg gttttctttg ggcgtttctt
     8461 tttctttggg tgtttctttg ggctgcgcct gtttttcggg tgtttctttt cggggttcgg
     8521 gatggggggc gtttgtgggc agtacggggg tttctttgag tgtgttttca gcttgtgttc
     8581 cggtgccggt taacgaatcg gctgcccggg ccgcatccga agggcgcggt ttgacccggt
     8641 ttttcttggg tgcggcaggg ggcggcagtc cgctgccgct ttcttctgtg ccgtccggct
     8701 gtgcgggttc ggatgaggcg gcgtggtggt gttcgggttg ggcggcatct tgtccgacgg
     8761 cgccgtttgg cagccagaat tcggtttcgc gggggctgtc ggtgtgttgc ggttcggttt
     8821 ggagggtttt gtcgccgttc gggttgaatg tgctgacgat gcctactgcc aatgcgccga
     8881 tggcggtgat acagatgagc aatacggcgc gtatcaggag tttgggggtc agcctgaagg
     8941 gtttgttcgg tttttttgcc attttgattg tgcttttggg gtgtcgggca atgccgtctg
     9001 aaggcggttc agacggcatt gccgagtcag cgttggacgt agttttggta gagggtaatg
     9061 actttttgta cgccgacggt ggtgctgact ttttgggtaa tctgcgcctg ttcttcgggg
     9121 gtgaggatgc ccataacgta ggttacattg ccgtaggtaa tgattttgac gcgcgcctgt
     9181 gtagcggggc tgatgcccag cagcgtggcg cggactttgg acgtgttcca agtgtcgccg
     9241 gcgatgtcgc ccgcagtgcg cggcagggag gcgacggtaa tgtagttgta tacgccttcg
     9301 gcggcctgtt cggaacgtgc aatctgaccg acgaactgtt tttcgccttc ggtggcgact
     9361 tgtccgagca gcagcaggtg gcggttgtag ccgacgacgg agatttgggg cgtgtagcct
     9421 ttggtttggt tgttttggcg caggtaggaa cgggcggtgg tttcgatacg caacgccata
     9481 acgttgtcat cggtttgcgc gccggtggtt cggcggtcga tgacggattt cgcgccgacg
     9541 gcggccccgc cgacgactgc gctgaagcag ccgccgaggg caaggctgag gacggcggca
     9601 atcagggtgc ggacggtgtg tggtttgggt ttcatcgggg acttcctttc ttgggcgttt
     9661 cagacggcat tgctttgcgc catgccgtct gaaaagggtt acattccttc cagcagtacg
     9721 gagtcgatac agtcgcatat ggcgtgtatc agcaggatgt ggttttcctg aatgcgggcg
     9781 gtgcgcggat gggggacgtt gagcagaacg tcggtgtctt tgagcatggc ggcgattttg
     9841 ccgccgtcgc ggccggtcag ggcgatgacg tgcatatcgc gttcgtgcgc ggctttgacg
     9901 gcttcgatga cgttggcgga attgccggag gtggaaatgc cgacgaggac gtcgcctgca
     9961 cgtccgagcg cgcgcacttg tttgctgaat acgtggtcga aaccgtagtc gttgccgatg
    10021 gcggtcagcg cggaggtgtc tgtggtcagg gcgacggcgg cgagttccat gcgttctttc
    10081 tcaaaacgcc cggtcatttc ggcggcgaag tgttgcgcgt cggcagccga accgccgttg
    10141 ccgcaggcca ggattttgcc gtcgttcatc aggcattgca gcatcagctc ggcagcctgt
    10201 acggtcggct cgaccagtat tttttcggct tcctgtttgg cacggatgct ttcggcaaaa
    10261 tgtgcggcaa cgcgttcttg taatgtcgtc atatcgtcaa cctgtaatat tctttatcca
    10321 ctcgggcggg cggtttcctt cgataagtac cgcatcgagg cggcacggta cgtttgtcag
    10381 cctgttctgt tgcagataat actctacact tcgttgcagt ttcaataatt tggacggaga
    10441 aatgctgtat gccgcgccgc cgaaccgttg gtttttgcgg tattttactt caacaaacag
    10501 aatcatgccg ccgtttttga caatcaggtc gatttcgccg taggcgcagt gccagttgcg
    10561 ggcaagcagc gtgcagcctt gggattggag gaaggcaagt gcggcatctt cccctgccgt
    10621 accctgtttg tggtttaagc gcataatcgg tttaaccttt ataatgtctg tttttcagac
    10681 ggcatttttt atgtttcaga aacacttgca gaaagcctcc gacagcgtcg tcggagggac
    10741 attatacgtg gttgccacgc ccatcggcaa tttggcagac attaccctgc gcgctttggc
    10801 ggtattgcaa aaggcggaca tcatttgtgc cgaagacacg cgcgttactg cgcagctttt
    10861 gagcgcgtac ggcattcagg gcaggttggt cagtgtgcgc gaacacaacg agcggcagat
    10921 ggcggacaag gtaatcggtt tcctttcaga cggcctggtt gtggcgcagg tttccgatgc
    10981 gggtacgccg gccgtgtgcg acccgggcgc gaaactcgcc cgccgcgtgc gcgaagcagg
    11041 gttcaaagtc gttcccgtcg tgggcgcaag cgcggtaatg gcggcgttga gtgtggccgg
    11101 tgtggcggaa tccgattttt atttcaacgg ttttgtaccg ccgaaatcgg gcgaacgtag
    11161 gaaattgttt gccaaatggg tgcgggcggc atttcctgtc gtcatgtttg aaacgccgca
    11221 ccgaatcggg gcaacgcttg ccgatatggc ggaattgttc cccgaacgcc gtctgatgct
    11281 ggcgcgcgaa atcacgaaaa cgtttgaaac gttcttaagc ggcacggttg gggaaattca
    11341 gacggcattg gcggcggacg gcaaccaatc gcgcggcgag atggtgttgg tgctttatcc
    11401 ggcgcaggat gaaaaacacg aaggcttgtc cgagtctgcg caaaatgcga tgaaaatcct
    11461 tgcggccgag ctgccgacca agcaggcggc ggagcttgcc gccaagatta caggtgaggg
    11521 caaaaaggct ttgtacgatt tggcactgtc gtggaaaaac aaatgatgcc ggatggaccg
    11581 gcaccatagt gcgaacggaa tcaacggaca cgccccgtca tgcggtacag cacgtctttg
    11641 ccttgaacac ggtggacgac gaccatggcg acgtgtccga cgacggcggc aaacagcagc
    11701 cagcccaaat tgccgtggaa cgtgttgccc aagtttgcca tccactcgat tttttccggc
    11761 gaaccctgca ttacttcaac gccgaacact ttcaacgggc cgcgtccgcc accgtattgg
    11821 cggatcatgc cgataacggg aacggcaagc atgagcagat acagaatgcc gtgtcctgcc
    11881 gccgcagcct tgctgtcgct ttgcggacgc ttggcgcggt tggcaaccgc ccacacgatg
    11941 cgcaatgcaa tcaccgtcag catgaggaaa ccgaaagatt tgtgcaggcc gaacaggctg
    12001 cccgcccatt ccgcctcttc gtaaattgtc cacaggacaa tggtggtcag aatgccgatg
    12061 aagccggcaa cggtcagcca gtgcagcgcg cgtgtcaacg ggtcgtaaac ggcaggttgg
    12121 tttgtgttca taaaaaaatc cttatcatat gtaacggttt gaacggacat tccgtcgggt
    12181 cggaatgtca aaaaggcgcg attgtaccaa agaagttgga catattttgt ttgcaggctg
    12241 aagatttgct taaaaattca ttaagatggg cagaacaaat agtttctccg cggtatattg
    12301 aaataccgct tataccttat aatgtcggca gaaaatctgt tcagacggca tcaaaacata
    12361 tggcaatccg cctgaaaccc tatttaaaac caacaaacaa gagcatttaa tgaaattcat
    12421 cgacgaagca aaaatcgaag tcgccgcagg caaaggcggt aatggcgcaa ccagtttccg
    12481 ccgcgaaaaa ttcgtacccc gcggcggccc ggacggtggc gacggcggca aaggcggcag
    12541 cgtctgggca gaagccgacg aaaacaccaa caccctcgtc gaataccgct tcgtcaaacg
    12601 ctaccaagcc aaaaacggcg aaaaaggcca cggttccgac cgctacggcg caggtgcgga
    12661 cgacattgtc ctcaaaatgc ccgtcggcac ccttatccgc gacctcgaca ccgacgaaat
    12721 cgttgccgac ctcacctacc acggacagcg cgtctgcctc gccaaaggcg gcaaaggcgg
    12781 cttgggcaac atccacttca aatcctccgt caaccgcgcc ccaaaacaat ccacgcccgg
    12841 cgaagaaggc gaaacccgtt ccctgcaact cgaactcaaa gtcctcgccg atgtcggctt
    12901 gttaggcatg cccaacgccg gcaaatccac cctgattacc gccgtctccg ccgcacgccc
    12961 caaaatcgcc aactacccct tcaccaccct gcatccgaac ttgggcgtgg tacgcatcga
    13021 cgaaaaccac agcttcgtga tggccgacat ccccggcctg attgaaggcg cggcagaagg
    13081 cgcaggcctc ggccaccgct tcctcaaaca cctatcacgc accggtctgc tgttacacgt
    13141 tgtcgatttg gcacccttcg acgaaaccgt caatcccgcc gaagaagcac tcgccatcat
    13201 caacgaatta cgcaaatacg acgaagaact ttacggcaaa ccgcgctggc tggtgctgaa
    13261 caaactcgat atgctcgacg aagaagaagc ccgggcgcga acagccgcct tcctcgaagc
    13321 cgtcggctgg gactaccccg aacctgatga ccgtttccaa ttcgacatgg aaaccccgcg
    13381 cctcttccaa atcagcgcgc tgacacatca aggcacgcag gagttggtac accaaatcaa
    13441 ccaatacctg gccgagaaaa aacgtatcga ggctgaaaaa gccgaagcgg agaaagcagc
    13501 ggcaaatgtt gaaattatcg aacagcagcc taaaacggat actggcgtgt ttaagccgga
    13561 gtaaaaggac aatgccgtct gaaagttttc aggcggctca ttctgcagag atgtgctatg
    13621 tacaaaacaa tagatttatt ttcaggcatt ggcggaatac gcctaggctt tgaaaaatac
    13681 gggtgcacca atgtattctc atcggaatgg gacaaatatg cccgacaagt gtatgaagca
    13741 aactttggag aaaaaccttt tggcgacatt aacggcatcg atccttcaga tattcccgat
    13801 catgatattc tgcttgcggg atttccgtgc caacctttca gtatcgcagg taagggattg
    13861 ggatttgaag atacgcgcgg aacattgttt ttcaatattg ccgaaatcct gaaaaccaaa
    13921 cagccgaagg cttttcttct ggaaaacgtt aagcggctga ctacgcacga ttcgggcagg
    13981 actttccgta ttgttttaga aacccttaaa cagcttggtt atacggttta ttttaaggtt
    14041 ttaaatactt tggatttcgg attgccgcaa aaacgcgaga gaatttatat tgtgggtttt
    14101 tcagacaaca tcccttttta ctttcccgaa cccataaacc aatatcggcc attgggcgaa
    14161 ctgctggaaa acgatcgaga tgtcgaacca agctattttt tatcagatac cttgaaacaa
    14221 aaacgtttgg cagccttaaa aaaagctccg cccaccccat caatttggca tgaaaatatt
    14281 ggcgggaatg tttccgcact tccatattcc tgtgccttaa gggccggggg aagttacaat
    14341 tatttggtgg taaacggagt aagaaggcta acaggaaggg aaatgttaag attacaaggt
    14401 tttcccgatg attttgaaat caatatcccc tactcgcaag tcaggaaagt cgccggaaat
    14461 tctgtatccg tccctgtaat agaagccatc gcggaaaata tgctcgcttc tctttccggc
    14521 aaggtcgaac aaaaagggca attggattta ttggaggcag gatgacgctt gaagaacaac
    14581 aagccaaaga agcattggac ggcattatca aaaaatcccg tgtccacctt tataaaccca
    14641 ttcaaattgc agaaatttta tatcatgacc gttgtataaa acagttggat tttttaaatt
    14701 tagatactta ccgcaaccaa tctaaacgct ggagggatga aatctgccgt cggtttttag
    14761 ggcggatttc tacttcatct gcaaaattcc aagataatct gtttgaaaaa aatgcaatac
    14821 cgcctgaaaa actagcggta ttgggaacat taaacagaca gtcggacggc ggggtagaat
    14881 cgtacattta taaacagttt ttcaatcgtt tttcccaaat gagcgaagca ttggcttatg
    14941 tcggcaatac agacagatac tccttccaac tgtctgaatt tctaaattta ttttggctcg
    15001 agccgggatt gaaaagaagt atagacaaga tatatgaaat cgttgtttat gcgttgtttg
    15061 atgcattggt ttcagaatta ggcataacgg tttcaattga ttttcctaag gaaaacctgt
    15121 ttttatggga ggaatatcaa gattttgccg aaaaaatcat cactatgccg aaaaatgagc
    15181 atttaaaact tcctgcaaaa atccatcgtg taggcgtaac caatgctgcc gatagagggt
    15241 tggatatgtg gtctaacttc ggattggcca tacaggtcaa acatctctct ttagacgaag
    15301 agttggcaga agatattgta tcctccatta gcgcagatag aattgtcatt gtctgcaaaa
    15361 aggcagaaca atcggtgatt gtttcattac tgacgcaaat aggctggaaa agccgaattc
    15421 aaaacatcgt aactgaggat gatttgataa gttggtacga aaaagcattg agaggccaat
    15481 atccgattgc agaagcgttg ttggaaaata ttaaaactga aattatgcgt gaatttcctg
    15541 ccgttaatga agccaatgaa tttttagatt tcgcccaaaa tcgcggatat gacattactg
    15601 ttactcattt ctaaacttac ttgatgaata tgaccgccat ctacaacacc cttacccgtc
    15661 aaaaagaacc cttcgccccc atcgaccctg aaaacgtgcg tatgtacgtc tgcggcatga
    15721 ccgtttacga ctattgccac ttaggccatg cccgtgtgat ggtggtgttc gacatgattg
    15781 cccgctggtt gcgcgagtgc ggttatccgc tcacttatgt gcgcaacatc accgacatcg
    15841 acgacaaaat catcgcccgt gcggctgaaa acggcgaaac catcggcgaa ctgaacgcgc
    15901 gtttcattca ggcgatgcac gaagatgccg atgctttggg cgtgttgcgt cccgacatcg
    15961 agccgaaggc gacggaaaac atcccgcaaa tgattgccat gattgagacc ctgattcaaa
    16021 acggcaaggc atatcctgcc gcaaacggcg acgtttacta cgccgtgcgc gagtttgccg
    16081 cttacggaca attatcgggc aaatcgttgg acgacctgcg tgcgggcgaa cgcgtggaag
    16141 tggacggttt caaacgcgat ccgcttgatt ttgtattgtg gaaagcggcg aaagcaggcg
    16201 aaccggcgtg ggaaagcccg tggggcaacg gccgtccggg ttggcacatc gaatgttccg
    16261 cgatgagtga aaacctgttc ggcgatacgt tcgacattca cggcggcggc gcggatttgc
    16321 agttcccgca ccatgaaaat gaaatcgccc aaagcgtcgg tgccagcggt cacacctgcg
    16381 gtcatgacca cgcgcaaacc caccacggtc aaagtattgc cagccacgtc aaatactggc
    16441 tgcacaacgg cttcatccgt gtggacggcg aaaaaatgtc caaatcgctg ggcaacttct
    16501 ttactatccg cgaagtattg aaacaatacg accccgaagt cgtgcgtttc ttcatcctgc
    16561 gcgcccacta ccgcagcccg ttgaactact ccgacgcgca tttggacgac gcgaaaggcg
    16621 cgttgacccg tctgtacacc accttgaaaa acacaccggc ggctgagttt gatttgtctg
    16681 aaaacgccaa cggctacacc cgccgtttct acgccgccat gaacgacgat ttcggtacgg
    16741 tcgaagcggt tgccgtgttg tttgagctgg caggcgaagt gaacaaaacc aatgacgcac
    16801 acctcgccgg ctgcctgaaa gctttgggcg gcatcatcgg cctgctgcaa cgcaacccga
    16861 ttgagttcct ccaaggcggc gcagtttcag acggcctctc caacgaagaa atcgaagact
    16921 tgattgcccg acgcaaacag gctcgcgcgg ataaaaactg ggcggagtcc gaccgcatcc
    16981 gcgaccttct gaacgaacac aaaatcattt tggaagacag cgccggcggc acgacttggc
    17041 ggcgcggttg aactgtatcg gaaagggcaa aagtaccgcc ttttgccctt ttttcgtttt
    17101 cagacggcat ttcccgcttg aagccccgcc gttttcagca ggcaggaccg aatgggaaat
    17161 accgggcggc gcaccgggtg ccgctttgtg tatgggaaca ttgtgagaac ttatttttat
    17221 tatgcttaaa atcatttccg ccaacgtcaa cggcatccgc tccgcctaca aaaaaggttt
    17281 ttacgaatac atcgccgcat cgggcgcaga cattgtctgc gtgcaggaac tcaaagcgca
    17341 ggaggctgat ttgtctgccg atatgaaaaa tccgcacggg atgcacggcc attggcattg
    17401 cgccgagaag cgcggttaca gcggtgtggc ggtgtacagc aaacgcaaac ccgacaatgt
    17461 gcaaatcggc atgggcattg aggaattcga ccgcgaaggg cggtttgtgc gttgcgattt
    17521 cggcaggttg ggcgtcattt cgctttattt gcccagcggc agcagcgcgg aagaacgcca
    17581 gcaggtgaaa taccgtttcc tcgatgcgtt ttaccctatg ctcgaagcga tgaaaaacga
    17641 agggcgcgac atcgtcgtct gcggcgactg gaacatcgcc caccaaaaca tcgacctgaa
    17701 aaattggaaa ggcaatcaga aaaattcggg cttcctgccc gaagagcgcg agtggatagg
    17761 caaagtcatc catacgctgg gctggacgga catgtggcgc acgctctatc ccgatgtgcc
    17821 gggttataca tggtggagca accgcgggca ggcgtatgcg aaagatgtcg ggtggcgcat
    17881 cgattatcag atggttacgc ccgaacttgc cgccaaagcc gtgtccgcac acgtttataa
    17941 agatgaaaaa ttctcggatc acgccccttt agttgtggag tatgactatg ctgccgaata
    18001 aggttttggg taaatatgat tggaatgtgg acggaaaaac aggaataggc gcggcatggg
    18061 ttgtcgctgc gtttatcctg cccatattgg tgtgggcggt gtttatgttg tcgcggatgc
    18121 aaggctggct tgcgccgacc aaggcaaacc cgatatgggc gttggtgtgg ctgctgattt
    18181 gtctgccctg cctgctgatt gcggccaaat gtttgggttg gaaaggctgg cggcgggtgg
    18241 tgaatatttt tgtctgcctg accgtctgcg ccatattgag cgtacccgct tcgctgctca
    18301 tcgcctttac cctccgggat ctgctcaaat agtcgcggac aatggaaagt ttcgagcttg
    18361 aggatttgac gctgtggctg atacgcgatg cggatgaagc ggaaatgtgg atagaccgtt
    18421 gggcggtcag ttatcccgtt gtgcagatgt ccgaagcgtc cgcaaacggc agcacggaag
    18481 cgtggcaaag cgcgcttcag acggtattcg aacggataca gggcaggcat atcgccgttg
    18541 tcgcacacgg cgcgggcgcg gccgcattct tggcgtggct gtaccgcgcc gacatcctga
    18601 cgcagaagaa actcgccggt atcattctcg tatctccgcg tcccgatatt tttcccgacg
    18661 atgcggaaca cactttccaa cgcgtccgct gtccttgccg tgccgcattg gtggtgtccg
    18721 aacacggcgg cgtgccgcac ggttgggcgc aaaaacaggc ggatttgtgg aacgcccgcc
    18781 tgttggtttc cccgcattcg ggcagtttga acggtatgct cggcggctgg cagtggggta
    18841 tgaagctgat gcaggaaatg ttgctggcgt gaacggtcgc tttatcggaa tttcggttaa
    18901 ccggggttgc aaggaaaata ccgtctgaaa caggcttcag acggcatttc cattcaaaca
    18961 gggcttacag gctgcccaac acgatacgca acacgcggcg catcggttcg gctgcacccc
    19021 acaaaagttg gtcgccgacg gtgaacgcgc tgatgtattc gccgcccatg cccagtttgc
    19081 ggatgcgtcc gacagggacg gacagcgtgc cggtaacttt ggcgggcgtc agctcgcgga
    19141 tgccggcttc tttttcgttg gggacgactt tcacccagtc gttcgcgcct gccaaaatcg
    19201 cttcgatttc ggaaacaggc aggtcttttt tcaacttcag agtgatggct tggctgtggc
    19261 agcgcatcgc gccgatgcgg acgcacaggc cgtcgatgac ggtcggattg ccgctgcgtc
    19321 cgaggatttt gttggtttcc acgccgccct tccattcttc tttggactgg ccgttgccca
    19381 aatccacgtc aatccacgga atcaggctgc cggcgagcgg tacgccgaag ttggctttcg
    19441 gatagtcttc gctgcggagg aaatcggaca ctttgcggtc gatatcgaga atcgcgctgg
    19501 aaggatcggc aagctcgtcc gccacttggg cgtgaatcgc gcccatgccg ctgatgagtt
    19561 cgcgcatatt tttcgcgccc gcgccggaag cggcttggta ggtcatgctg gtcgcccatt
    19621 cgaccaaatc gttttggaac aggccgccca aagccatcag catcagggag acggtacagt
    19681 tgccgccgat gtagtttttc acgccgtttt tgagaccgtt gtcgatgacg ttgcggttga
    19741 cggggtcgag ggcgataatc gcgtcgtctt tcatgcgcag tgaggacgcc gcgtcaatcc
    19801 agtagccgtt ccagccgctg tcgcgcaggg cttggaagac ggatttggtg taatcgccgc
    19861 cttggcaggt gacgataatg tccattttcg ccagctcggc aacgtcgttc gcgtccaata
    19921 atgttttagc cgcctgaccg aaatcaggtg ccgcgccgcc gacgttggaa gaggtaaaga
    19981 aaaacgcttc gggaatgtgg gcgaagtcgt tttcttcttt catacgctgc atcaaaaccg
    20041 aaccgaccat accgcgccag ccgacgaaac ctactttcat gtattgctcc ttgaggaaaa
    20101 tcgttaataa aattatgtat ggcgtaaaga aagcgtttta acgccgtatt gggaaaatgt
    20161 aaagttcttt atcgaatttt ctttttggga ttggcgtttg cagcagtagg gcggtagaat
    20221 tccatctgtt taagaacaat tatcaggaac ggatatggaa gaaaaaaacg actacaccga
    20281 cgcggtatcc gacaaccgca acgggcagga aattgaagtc ggaattgccg gcgcaggcga
    20341 ccggatactt gccgcgctgc tgaaccaatt gtttaccttt ttgattttgt tggtgccgtt
    20401 tgtcggactg attgccttcg ccgtcaaaaa tgaaggcagg attggcggcc gtgaggaaat
    20461 attcgggctg cttttgggca tgacttcctt ttgggtcgga ctggcgggca ttttggcgta
    20521 caccgtcatc caaatctact atatgagcag ggacgggcag tcattgggta agaaaatcat
    20581 gagaatccgc gtgttgaaaa ccgacggccg caatccgggt tttgtcggca cggttttggt
    20641 acgcgaaatc gcgtggtcgg ttttggttgc cattattgcc gccgttatcg gtcttgcagt
    20701 aggtgaaaac ggggaaaacg ccatcaacct gctggcattc cttgccaact ttgtcctgct
    20761 ctttatggtc aaacgcgacc gccgcacgct ttacgacata ttggcggata cggttgtcgt
    20821 caagctgccc aaataaacgg acgcggcaaa atgccgtctg aaaggctttc agacggcatt
    20881 tttatcttca gaaccgctca agcatcgtgc agcgaagctg cgtgcaaagt gttttccatt
    20941 aatgtggcaa tcgtcatcgg acccacgccg ccgggaacgg gcgtaatcat cgccgcccgt
    21001 tcttttgccg tttcaaattc cacgtcgccg cacaggctgc cgtcgtccaa acggttgatg
    21061 cccacatcga taacgaccgc gccgggtttg atccacccgc ctttgacaaa gttcggaatg
    21121 cccacgccga ccaccaaaat atcggcggcg gcaacttcat cggcaagatt ttcggtcgca
    21181 ctgtggcaga ccgttaccgt tgcgcgcgcc agcagcaatt ccaacgcctg cgggcggccg
    21241 acaatattcg acgcgccgac cacgaccgct tttttcccct tcggatcaat gccgtaagcc
    21301 tccaaaagcg tcatcacgcc cttgggcgta cacgggcgca tcagcggcat tttgaccgcc
    21361 agcctgccga cattgtaagg atggaagccg tccacgtcct tatccggcga aatacgttcc
    21421 aagatcgctt ggctgtcgag gtgcttcggc agtggaagct gaaccagaat accgtccact
    21481 tcggaatcgg cattcagacg gtcgaccaat gccagcagtt cttcctgcga tgttgattcg
    21541 ggcagttcgt acgacagcga cttgatgccg catttttggc aggcggtttt cttgttgcgg
    21601 acataaactg cgccggcagg gtcgcctccg accaaaacca cggccaggca aggcgtgtgc
    21661 agattgtcct gttggcgttg cgccaccgct tcggcaatcg cctgcaggtg tttttgcgaa
    21721 acttctttac cgttgatcag ttgtgccgac atatccgtcc ttttgttaaa caggtagaaa
    21781 atgctgaaaa ttatcgcatt ttccgtttgt ttttacagca gaatgccgaa aataaatttg
    21841 ccccgaaata aaatacggct gtttggacgg attaaatatt ttttcaaatc aaaaaactat
    21901 atttttcatc ttggtgtttt gaaaataaat gttgacgcat ctttccctga actgtatatt
    21961 ccgcttcttc aagtcggggc gtagcgcagc ccggttagcg catctgcttt gggagcagag
    22021 ggtcgtgagt tcgaatccca ccgccccgac caatcaatca gcacgaatcg gcatgagcgc
    22081 ccgtagctca accggataga gcaccgacct tctaagtcgg gggttacagg ttcgattcct
    22141 gtcgggcgtg ccaagaattt gattgaaaac cgtttttatg gtggctgtag ctcagttggt
    22201 agagccccgg attgtgattc cggttgtcgt gggttcgagc cccatcagcc accccagata
    22261 aaggcccgta cttttcggta cgggtctttt cctgtttgcg cgtactgtcc gcgccgccgg
    22321 ctttgccttt cgcatatgct tctgtatcat gtgggttttt ctgtctttta tggtttttgt
    22381 cggaggcttt gatggttgac gcttggtctg tccctgattt tgaatcgaaa atctgtccgc
    22441 ccgaggcatt ggcggcgcgt ttggcgttgt tgccgcgccc gctggtgttt accaacggct
    22501 gtttcgacat cctccacagg gggcacgtta cttatctggc gcaggcgcgt tcggcagggg
    22561 cggcgttggt gctggcgttg aataccgatg cttcggtgcg gcgtttgggc aagggcggcg
    22621 accgcccggt taatcctttg gagaaccgtg ccgccgttgc cgccgcgttg gaaagtgtgg
    22681 atttggttac ttggtttgac gaggatacgc cggcggcgtt gattgaggcg gtcaagccgg
    22741 aggtgttggt caagggcggc gattgggtcg tggataagat tgtcggtgcg gcggaaacgt
    22801 tggcacgcgg cggtcaggtg ttttcaattc cgtttctgca ccagacttcg acaacgaaga
    22861 ctttggcaaa aatccgtgcg gcagagggcg gaaaatgacg gttttgaagc cttcgcactg
    22921 gcgggtgttg gcggagcttg ccgacggttt gccgcaacac gtctcgcaac tggcgcgtat
    22981 ggcggacatg aagccgcagc agctcaacgg tttttggcag cagatgccgg cgcatatacg
    23041 cgggctgttg cgccaacacg acggctattg gcggctggtg cgccccttgg cggttttcga
    23101 tgccgaaggt ttgcgcgagc tgggggaaag gtcgggtttt cagacggcat tgaagcacga
    23161 gtgcgcgtcc agcaacgacg agatactgga attggcgcgg attgcgccgg acaaggcgca
    23221 caaaaccata tgcgtgaccc acctgcaaag taagggcagg gggcggcagg ggcggaagtg
    23281 gtcgcaccgt ttgggcgagt gcctgatgtt cagtttcggc tgggcgtttg accggccgca
    23341 gtatgagttg ggttcgctgt cgcctgttgc ggcacttgcg tgccggcgcg ctttggggtg
    23401 tttgggtttg gaaacgcaaa tcaagtggcc aaacgatttg gtcgtcggac gcgacaaatt
    23461 gggcggcatt ctgattgaaa cagtcagggc gggcggtaaa acggttgccg tggtcggtat
    23521 cggcatcaat ttcgtgctgc ccaaggaagt ggaaaacgcc gcttccgtgc agtcgctgtt
    23581 tcagacggca tcgcggcggg gcaatgccga tgccgccgta ttgctggaaa cattgcttgc
    23641 ggaactgggc gcggtgttgg aacaatatgc ggaagaaggg ttcgcgccat ttttaaatga
    23701 gtatgaaacg gccaaccgcg accacggcaa ggcggtattg ctgttgcgcg acggcgaaac
    23761 cgtgtgcgaa ggcacggtta aaggcgtgga cggacgaggc gttctgcact tggaaacggc
    23821 agagggcgaa cagacggtcg tcagcggcga aatcagcctg cggcccgacg acagaccggt
    23881 ttccgtgccg aagcggcggg attcggaacg ttttttgctg ttggacggcg ggaacagccg
    23941 gctcaagtgg gcgtgggtgg aaaacggcac gttcgcaacc gtcggcagcg cgccgtaccg
    24001 cgatttgtcg cctttgggcg cggagtgggc ggaaaaggcg gatggaaatg tccgcatcgt
    24061 cggttgcgcc gtgtgcggag aatccaaaaa ggcacaagtg aaggaacagc tcgcccgaaa
    24121 aatcgagtgg ctgccgtctt ccgcacaggc tttgggcata cgcaaccact accgccaccc
    24181 cgaagaacac ggttccgacc gttggttcaa cgccttgggc agccgccgct tcagccgcaa
    24241 cgcctgcgtc gtcgtcagtt gcggcacggc ggtaacggtt gacgcgctca ccgatgacgg
    24301 acattatctc ggcggaacca tcatgcccgg cttccacctg atgaaagaat cgctcgccgt
    24361 ccgaaccgcc aacctcaacc gccccgccgg caaacgttac cctttcccga ccacaacggg
    24421 caacgccgtc gcaagcggca tgatggacgc ggtttgcggc tcggttatga tgatgcacgg
    24481 gcgtctgaaa gaaaaaaccg gggcgggcaa gcctgtcgat gtcatcatta ccggcggcgg
    24541 cgcggcgaaa gtcgccgaag ccctgccgcc tgcatttttg gcggaaaata ccgtgcgcgt
    24601 ggcggacaac ctcgtcatcc acgggctgct gaacctgatt gccgccgaag gcggggaatc
    24661 ggaacacgct taaaaaatat gccttttttc aacacggggc ggcatccgtc cgaatctgtc
    24721 cggattctgc cgcccgacag actgccgccc gggcgggcgg ggtttcaaac attgaggaaa
    24781 ttctaatgaa atggctcttc acccttttgg cggtactcaa tattgccgta ttcggcggca
    24841 cggtgggcta taaattggcc gttaaagcgg cgggcggcgt gccggaaaac cgggccgtcg
    24901 aaaacacgcc ccccgcaacg cccgccgccg gcaatgcggc ggcatccgtg gaggatacgg
    24961 cggcactgct caaaccgggc gacatcctga gcgaagaaca ggcggagcag ttgcgcttga
    25021 aaaaagaagc ggaacagaaa aaactgaggg agaaaaaaca gcgtgaagaa aaagcccgcc
    25081 gcgaaaaact cgccgccgaa aaggcgcagg cggaacgtga aaacggcgcg gcggatgcct
    25141 tatgcgccgc gcaggcaagc ctcacgatgg acgaagacga ctaccaccgc atcaaagggc
    25201 ttttgggcaa atggtcgcac gttgccagca ggagcgtcga aaaacgcacc gccaaagcca
    25261 aacctgccga caaaacctac cgcgtcgtcc tgcccgtttc cgccgatgcc gaaaatcagg
    25321 cggcggagct gtctgccaaa ggtttcaacc ccataccgtt tgacggcgca ttgagtttgg
    25381 gtgtcggcaa cagccgggaa aacgcccaag ccctgcaaaa ccggcttgcc gatgccggat
    25441 tcggcggggc gcatattgtc gaacactttg ccgaagccga caggcaggac gattctttga
    25501 gcgtgtcgcg tatgacggtt ttgtttacgg gcgtgaatgc cgccgatgcg gacgaaatcc
    25561 gtaaaatcac gtccctatac ggcaaactga acctcaagtc ttgcaaataa gtgcagacca
    25621 aaaacgccaa acccaccgct agggtgggtt tggcgtttcg gttttgagta tctgattaaa
    25681 aagggaatgt atgtctcgta tatgccgact ccaagtgtga aagtgaattg tgagggaata
    25741 cagtgtttaa tggttcggaa cggacggctt ccgagtggtt ttgattatac gctaataata
    25801 ataattatca ataaaaattt aaaaataaat gcggattttt tgtaatgcga tgaaaaataa
    25861 acaaattaac ctgtccgccg atgtttgtga tttgggtcgg caaactttca ttgcgccgga
    25921 caaatcgggg tcggcaggca tggacggggg cttcgtgcct gtcggaaaga agcctgccgt
    25981 gtttgaacaa ccgtccgatt tggtgcggac agggttgcca ttcgggggtg tttgagcgcg
    26041 gattcgggga tgcaaaagcg gtgaaaccgt tgcggatgaa ggcttacgga tgccccgagg
    26101 tatttttaaa tgtattcaaa cgacaaaaca cccttctatt gccgtactta gggcttgcgc
    26161 agcagcctgc gcgccgggga gtccgggtgt ttcgttggtt gcggtgtcgg ggcgggcggc
    26221 aaggttttcc ggccggtttc cctgttcctc acgacaaagc cgtgatgccg gggaatggcg
    26281 gtttgcccgt ttggggccgc gatgccgtct gaagccttca gacggcattt ttgccgcctt
    26341 tttcaatatt ccgccgaatg ccaaaacggt tgcccgactg tcggcgtgct ggcttgggct
    26401 ttggttcgcg cttcgaccgg cccggcttca aatgccagcc gtccggattc gacggcgagt
    26461 gcgaaggcgc gcgccatgtt gacggggtcg ccgctgcggg aaacggcggt gtttaacaat
    26521 acgccgtcaa aaccccattc catcacttgt gccgcttggg aaggcaaacc caagcccgcg
    26581 tcgataatca gcggcgtgtc gggcaggcgt tcgcgcagga ttttgagcgc ataggcgtga
    26641 accgccccca aacccgtgcc gatgggagcc gcccacggca tcaacgcctg acagcccgca
    26701 tcgagcaggc ggcggcaggc aatcaggtct tcggtgcaat aaggcaacac tttgaagccg
    26761 tctttaatca ggatttccgc cgcttcgacg agttggaaca cgtccggctg caaggtgtcg
    26821 tcgtcgccga tgagttccaa ttttatccaa tcggtttcaa acacttcgcg cgccatttgc
    26881 gccgtcgtta ccgcttcctg cacgctttgg cagcctgccg tgttcggcag gacgggaacg
    26941 ccggtttctt gaagcagcga ccaaaacccc tgaccgtgcg cctcgccgct gcatcccgtg
    27001 cggcgcagcg agacggtaat catcgcgggc cgggcggttc ggacggattg tttgaggatt
    27061 tcaggggtcg ggtaggcggc cgtgccgagc agcagccgcg aagggaaagt ttcgccgtac
    27121 agggtgagca tgatggattc tttggtatgg ttgtcggacg cgatgccgtc tgaaagccgg
    27181 cggcgtgcct ttggggtttc agacggcatt cagccgccga cgacggggcg gacgatgtcg
    27241 attttgtcgt tttcgtgtaa aacggtttcc gcatacgcgc ctttggggat gaaaacggtg
    27301 ttgaccgcca cggcaaaggg cttttgcggc gcggtttggg cgatgaggtc ggcaacgctt
    27361 gtgccgtgaa gttcggcggg tccgccgttt aagatgatgt tcatggtttc tcgatgtttc
    27421 tgtatttata gtggattaac aaaaaccggt acggcgttgc cccgccccgg ctcaaaggga
    27481 acgattccct aaggtgccca agcaccgggc gaaccggttc cgtactattt gtactgtctg
    27541 cggcttcgtc gccttgtcct gatttttgtt aatccactat atctagccga attactttat
    27601 tttttgatac gcaaccggcc ggttgccgtc attcccgcgc aggcgggaat ccatttttga
    27661 aattcggaaa ctgtttttca aatgatggtt tctcaagttt tacggcggat tcccgcctga
    27721 gcgggaatga cggaatttga tgatatgcca catttaaagt taagcatatt tgcgataacg
    27781 ggctaagttt tgcctacacg gcaattgaat tttcttcttt cggttttatc catcccacaa
    27841 agcctgaaac gctttaacca ccgcttcggg atttgccgct tcggttacgg cgcggacggc
    27901 ggcgagtgag gaaacgccgg tggccagcac ggctcgggcg ttgttcaaat cgatgccgcc
    27961 gatggcgacg acgggcgtgc cgcgagcctg ttccacatat tcgcgcaatt tgtccaagcc
    28021 ttgcggggcg gtgggcattt gtttggtcgt ggtctggaaa atcgcgccgc tggcgatgta
    28081 gccggggtgt acggacaggg cgcggtcgag ttcggcgacg gagtgcgtac tcaaacccaa
    28141 acgcaaaccg gcggcggcga tggcggcaag gtcggcggtg tccatgtctt cctgcccgag
    28201 atgtacgccg tatgcgcccg cttcgattgc ctcgcgccag tggtcgttga tgaaaagctg
    28261 tgtgcggctg ccttgacagg cggcgacgca gcgggcgatt tcgcgtttca attcgttgcc
    28321 gtgcaaggtt ttacagcgca gttgcaccgt gtcggcacct gctttgacca tgcgccccac
    28381 ccaatcggcg gtgggaacga cggcgtagaa tttaagtagg gattttaggg gcgggaaggt
    28441 catagggtgt cctttcgggc ggctttaatc ttgtcttccg atatacgcca aaccgctttc
    28501 ttcatcacgt tcgggcgcgt cttttccgtc aaacagtgcc actgccaatc tgacggcggc
    28561 ggcggttacg gcgggggaaa tcataaagcc gtgccggaaa aggccgttga tttcgatgag
    28621 gcggcgttcg cggctgtagc ggatttcggg gttgtggtgg ttgagcgtgg ggcgcaggcc
    28681 ggcggcgatt tcgaggatgt cggcttcgcc gaaggcgggg tggacggcat agagcgcgga
    28741 taagagttcc agcccggaac gtacgctggc gggggcttgg ctttcgcttt cgatttgggt
    28801 cgcgccgatg acgaagacgt ggttttcttt cggggcgatg tagagcggat agcgcgggtg
    28861 cagcaggcgc acggggcggt tgagcgtgat ttcgggcgtg taaacccgcg ccacttcgcc
    28921 gcgtatgccg cgcaaggtgc tggtgtgctc gggggattgg ttccacgcgg ttttcgcgcc
    28981 gtagccccgg cagtcgatta cccagtcgta ttgggcttgc aggtcttggg gggcgcattc
    29041 gtgttcccaa tggcaaggga cgttcagttc gtccaaagcg tcggcaagtg cagacaatat
    29101 ttgccgcccg tcgagctggc cttcggtcgg caggtagatg ccgtctgaaa aacgtccgcc
    29161 gagttgcggt tcgcgttcgg cgatttcatc ggcgcgccaa cggacgattt cgtcatccgc
    29221 tacgccgccg cgtttgagat ggcggacgaa ctcgctggat aatggcttgt cctgtccgtg
    29281 ccacacaatc aggctgccgt tttcctgcat catcgtgagc gtgttcagac ggcatcggat
    29341 gccgcgccaa agcggaatgc tctgcctgcc cagcctgatg acttcgggcg ttgcctcgac
    29401 cgcttccgcc gcaggcgcga gcatcgcggc ggcaacatag gcggcggcgt gttcgccttg
    29461 gcgggtgcct ttgtcgaaaa gttcaatctg ataaccttgt tctgcaagct gcaatgcggt
    29521 cagccttccg gaaaggccgc ctccgaggac ggcgatacgg gtcatgacgg gttcctttgt
    29581 aaagattggg cttttttaaa gaaaaggcgt accgatacgg tggcaatggc aacggcagac
    29641 attacggggg cggtcagacc gatgctgctt tcccaaccgg acgagagcag gaagcggtag
    29701 aggatgaagc ctgccagcca cagaaccagt ccggcaaagt caaagccttc aatctcctca
    29761 cgccgtttta agacgaaaaa gtcggcaatc aaaaccgccg ccatcggcgc aaataccgag
    29821 ccgataagca gcaggaagtt tttatattcg gtaacgggca gcatgacggc aagcaccgtg
    29881 ccgatcaggg taacgccgac agcgacgggt atttccgcaa aacgcgcgga aatgttgttc
    29941 gcactcgcgc cggcggaata ggtatcgaga aacgttgtgg taacggtgga gaggacgact
    30001 gccagaatgc ccgttatgcc caagcccgcg cccaacagga ttttcgccac gtcggtttct
    30061 ccggtaaaca gagccgccgc caaacccaag gcatacatcc agcagcccgt cagcgtatag
    30121 gcgagcgttg ccgtcagggt tgccgcaaac gggcggcgtg cttggcgcgt gtagtcggcg
    30181 gccagcggca gccaggaaag cggcatgacg gcggacagtt tgactgccgt tccgaaggtc
    30241 atgccgtctg aaacggcggg cgcggcgttt gtgccggacg aagcgaacac ttcgacgctc
    30301 aaccacaaca cggcaagcag catcagcagc atcgaaacgg ttttcagccc gcccgttctg
    30361 cgtgcgccga aaaccagcca cagcacgatc agtgcgccgt ttgccaatgc ccaccagaca
    30421 aaggattcgc cgtcccacaa cactttgccc aaagcggagc tgaccgttgc gccgacgtaa
    30481 atcatcaccg ccgtccagcc ggccagttgc agcatattcg ccacggaaaa cagcactgaa
    30541 ccgcatttgc cgaacgacag gcgcacactt tccatcgagc tgcgtccggt cagtgcgccg
    30601 atatacgctg ccgcaaaaaa cagcgcgccg ccgacggcat gacccaaaag cagggccgcc
    30661 agaccgcgct gccagcccaa gggggcgagc agcgtacccg tgctgatttc ggcaatcgat
    30721 accgccgcgc cgaaccaaat cagcccgatg gcggcggaag atgaaggaga ggaggcattg
    30781 cccgacatat gacgtccttt aaaaagaagg aaggtgggcg gggaagtgcg gaaaagggaa
    30841 cggaagcccg aaagggcggg gaggttttgt ttcctacgca ggcattaccc cgacaggttc
    30901 tacggatttt gctttcgcaa tctcagccgc ccggcgggcg gcactccgac aagaaggctt
    30961 taagtttaca caaagcaacg tgcgttggca aaattcttac attttcgacg gcacggcgca
    31021 tttccataac aaatgccgta taatcaagcc cctgattttt tatgcgccga cactatgcat
    31081 ccgacctatt ccgccgtaca ggcgcggctg ctcgaagcca accgcctttg ccccgaactg
    31141 ctcgccaaaa gcctgtgcat catcggcgcg caccacgtcg attatgccga tatctactgc
    31201 cagcgcaccg cttatgaaag ctggcatttg gaagagggca tcgtcaaatc gggcagcttc
    31261 caaatcgatc agggtgtggg cgtgcgcgcc gtttcgggcg acaaaaccgc ctttgcctac
    31321 gccgacagcc tgtgcatcga ttcgataaac cgttccgccc gcgccgtccg cgcgattggg
    31381 gcggcaggcg gcaaggtgtc cgccaaaatg ccgtctgaaa cgcgcggcaa gccggtttgt
    31441 tccgcatccg accccattgc cggcctcgat tccgccgcca aagtcgcgct gttgaacaaa
    31501 gtggaagcaa tcgccaaagc cgccgatccg cgcatcgtgc aagtgatggc cggtttgacc
    31561 tgcgaatacg atatggttta cctcgcccgt ctggacggca aacacgccgc cgacatccgc
    31621 ccgatggtgc gcctgaacgt taccgtcatc gccaaacagg gcgaacgccg cgaacagggc
    31681 ggcgcgggcg gcggaggacg ctacgacttg gcttatttcg atgaaacctt ggtgcggcag
    31741 tttgtcgatg ccgccgtcaa acaagccctg accaatctcg aatcccgtcc tgcgcctgcc
    31801 ggcgagatga ccgtcgtttt gggcaacggt tggccgggcg tgttgctgca cgaagcggtc
    31861 ggacacggtt tggaaggcga tttcaaccgc aaggggacca gcgtcttttc cggccggatc
    31921 ggcgaacgcg tcgccgccaa aggcgttacc gtcgtcgatc agggcgatat tgccggccgg
    31981 cgcggttcgc tcaacatcga cgacgaaggc aacgaaacac gccgcaccgt attgattgaa
    32041 gacggcatct tggtcggcta tatgcaggac gaaaccaacg cccgcctgac gggtacgcaa
    32101 tcgaccggca acggccgccg ccaaagctac gcctccgtcc cgatgccgcg tatgaccaac
    32161 acctttatgg aaaacggcag ctacgagccg gaagaaatca tcgcgtccat cgacaagggc
    32221 atttacgccg tcaacttcgg cggcggacag gtggacatca ccagcgggaa atttgtcttc
    32281 ggcgcgtccg aagcgtggtg ggtggaaggc ggcaggctgc aataccccgt caaaggcgcg
    32341 accattatcg gcaacggccc cgaagtgctg aaacacgttt cgatgatagg caacgatacc
    32401 gcgctcgaca gcggtgtcgg cgtgtgcggc aaagaagggc agagcgtccc cgtcggcgtg
    32461 gggcagccga ccctgcgtat cgatgccggg ctgaccgtcg gcggcagcgc aatctgacgc
    32521 ggaatccggc acgatgccgt ctgaaaggtt ttcagacggc atcgccttat tcttttttcc
    32581 gatgtttgat attcctaagc attctttaac attatcttac aagttcatta aaataccgcc
    32641 tttcgttaag ctgatttctg atgaactggc cttatttaat cgatgccgta cccaaattcg
    32701 ccgatgcggc aaagctgacg ctggaattgt ccgtttacgg cgttgttttg tcgttgctgt
    32761 tcggcctgcc cgtcgccgtg gtaacggcat accgcatccg ccccttctac gcattggcgc
    32821 gcgcctatat cgagctgtcg cgcaatacgc ccctgctgat ccaattgttt ttcctatatt
    32881 acggtctgcc gaaaatgggc atcaaatggg acggtttcac ctgcggcgta atcgcgctgg
    32941 ttttcttggg cgcaagctat atggcggaag ctgtccgcgc cggcatcctc gccgtcccca
    33001 aagggcaggt cggagcgggc aaggcaatcg gtttgagccg ctttcaagtg ttccgctatg
    33061 tcgaattgcc gcaggtttgg gcggtcgccg ttcccgccat cggcgcaaac atattgtttt
    33121 taatgaaaga aacatccgtc gtcagcacgg tcggcattgc ggaattgtta tttgttacca
    33181 aagacgtcat cggtatggac tacaaaacca atgaagcctt gttcctgctg tttgccgctt
    33241 atttgattat cctgctgcct gtttctttgt tggcgcggcg gattgaaaac cgcgtacgga
    33301 gtgcgaaata tggcgtttga atggctgttt gaaggaaaaa atgcggcacg gttgggcgaa
    33361 ggcctgctct taacggcaca aatttcttta atctctgttg cggcttcttg cgtattgggc
    33421 acgctgttcg gcttggtttt gcgttcgcgc aaccggcttg tccgctttgt cggacggttt
    33481 tatctcgaaa ccatccgaat cgtgccgatt ttggtgtggc tgttcggcct gtatttcggc
    33541 ctatccgtct ggacaggcat ccatatcggc ggattttggg tctgcgtctg ggtattttcc
    33601 ctgtggggcg ttgccgaaat gggcgacttg gtgcgcggcg cactggaatc gattgaaaaa
    33661 caccaggtcg aatcgggtct tgcgcccggc ttgagccggg ggcaggtatt ccgctgcatc
    33721 gagctgccgc aaagcatccg ccgcgtattg cccggcgcgg tcaacctgtt cacgcgcatg
    33781 atcaaaacca gctcgctcgc ctggcttatc ggcgtgatcg aagtcgtcaa agtcgggcag
    33841 caaattattg aaaactcgtt gctgacgcag cccaatgctt cattttgggt ttacggcctg
    33901 atttttatgc tgtatttctt ctgttgctgg ccgctatctc tactggcggc aaaacttgaa
    33961 caaaaatggg aacactgaca tggctttact gagcatccgc aagctgcaca aacaatacgg
    34021 cagcgtaacc gccatccaat tcttagactt ggacttggaa aaaggcgaag tcatcgtact
    34081 gctgggcccg tccggctgcg gcaaatccac cctcctgcgc tgcgtcaacg gtttggagcc
    34141 gcaccaaggc ggcagcatcg tgatggacgg tgtcggcgaa ttcggcaaag acgtttcctg
    34201 gcaaaccgcc cggcaaaaag tcggtatggt ctttcaaagc tacgaactgt ttgcccacat
    34261 gaccgtcatc gaaaacatcc tcttaggccc ggtaaaggta caaaaccgcg accgtgccga
    34321 agcagaggcg caagccggca aactgttgga acgcgtcgga ctgctagacc gcaaaaacgc
    34381 ctatccgcgc gaactttccg gcggtcagaa acagcgcatc gccattgtcc gcgccctgtg
    34441 cctgaatccg gaagtcatcc tgctggacga aatcaccgcc gcacttgacc ccgaaatggt
    34501 gcgcgaagtc ttggaagtgg ttttggaact cgcccgcgaa gggatgagta tgctcatcgt
    34561 aacccacgaa atggggttcg cacgcaaagt tgccgaccgc atcgtcttta tggacaaagg
    34621 cggcatcgtc gaatcgtccg accccgaaac ctttttttcc gcaccaaaaa gcgaacgcgc
    34681 ccgccaattt ctggcaggta tggactactg atttaccgca aaccgtccga acccttttca
    34741 gacggcattt catagggcag tgctttatgt gtcgtcctgt gtgttgaaac atcccaagca
    34801 aacattcaaa aaggagattt ccaatgaaat tgaacgccaa actcaaagcc cttttggctt
    34861 ccgccgccat cgccgtcggt ctgaccgcct gcgggggcgg ctccggcgat gcccaatctt
    34921 cacaaagcag cggtgcggca accgttgccg ccatcaaaga aaaaggcgtt atccgcatcg
    34981 gcgtattcgg cgacaaaccc ccgttcggct atgttgacgc aaacggcaaa aaccaaggct
    35041 ttgacgttga aatcgccaaa gacctggcca aagacctgct cggcagcccc gacaaagtcg
    35101 aattcgtcct gaccgaggcc gcaaaccgcg tcgaatacgt ccgttccggc aaagtcgacc
    35161 tcatcctcgc caactttacc caaacccccg aacgcgccga agccgtcgat ttcgccgatc
    35221 cttacatgaa agtggcgttg ggcgtggttt cccccaaaaa caaaccgatt accgacatgg
    35281 cgcaattgaa agaccaaacc ctgctggtca acaaaggcac cgccgccgac gctttcttca
    35341 ccaaaagcca tcccgaagtc aagctgttga aattcgacca aaacactgaa accttcgacg
    35401 cgctgaaaga cggtcgcggc gtagcactcg cgcacgacaa cgccctgctg tgggcgtggg
    35461 cgaaagaaaa cccgaacttt gaagtcgcca tcggcaatct cggtcctgcc gaatttatcg
    35521 cccccgccgt tcaaaaaggc aacgccgacc tcctgaactg ggtcaacggc gaaatcgccg
    35581 ccatgaaaaa agacggccgt ctgaaagccg cctatgaaaa aaccctcttg cccgtgtatg
    35641 gcgagaaagt caaaccggaa gcattgttgg ccgaataagt ttgtttgaca agaaaatccg
    35701 tatccgcatt tgaaggcggg tgcggatttt tttcagccgc cgaaaatatt gcaaattcaa
    35761 aggaaaaatc aactatctca tcgttttatt tattttatta ttcttgcgcg tgcggaaatc
    35821 aagttcgtcc ggttttgcct gtttttgaat ttcgggaaac ttccaaatcg tcattccaga
    35881 taaaacgctt cagccttatg tttccggatg accgttttcg cgggatgacg gcggagcgtt
    35941 tctgttattc ggataaattc ctacggtatt gaaacggcga taaggtgttt tcctttatta
    36001 tataatttca atgcaaaatg atattttttg aacaagcgtg ccgcaaagcc ggaaaaaatg
    36061 ttcaagccgc atcggcggca gacgggacga aaaatgacgt ttgacgaatg gttgggcttg
    36121 tcaaaactgc ctaaaattga agcaaggatg ctgctgcaat atgtttcgga atatacgcgc
    36181 gtgcagttgt tgacgcgggg cggggaagaa atgccggacg aaatccgaca gcgggcggac
    36241 aggctggcgc aacgccgtct gaacggcgag ccggttgcct atattttagg tgtgcgcgaa
    36301 ttttatggca gacgctttac agtcaacccg aacgtgctga ttccgcgccc cgaaaccgaa
    36361 cacttggtcg aagccgtatt ggcgcgcctg cccgaaaacg ggcgcgtgtg ggatttgggg
    36421 acgggcagcg gcgcagttgc cgtaaccgtc gcgctcgaac gccccgatgc gtttgtgcgc
    36481 gcatccgaca tcagcacgcc cgcccttgaa acggcgcgga aaaatgcggc ggatttgggc
    36541 gcgcgggtcg aatttgcaca cggttcgtgg ttcgacaccg atatgccgtc tgaaaggcaa
    36601 tgggacatca tcgtgtccaa cccgccctat atcgaaaacg gcgataaaca tttgtcgcaa
    36661 ggcgatttgc ggtttgagcc gcaaatcgcg ctgaccgact tttcagacgg cctaagctgc
    36721 atccgcacct tggcgcaagg cgcgcccgac cgtttggcgg aaggcggttt tttgttgttg
    36781 gaacacggtt tcgatcaggg cgcggcggtg cgcggcgtgt tggcggagaa tggtttttcg
    36841 ggagtggaaa tcctgccgga tttggccggt ttggacaggg ttacgctggg gaagtatatg
    36901 aagcatttga aataattgtt tgcaaaattg gcggattttc cgttattggg ttatgatgtg
    36961 ttttgatatg taaacattta taggtttgga gcgataaaca atgaatgcag tcgtagttgc
    37021 cgtaatcgtt atgctggtgc tgtcgctgtc gcgcgtgcac gtggtattga gcctgacggt
    37081 cggcgcgttt gtcggcggcg cggtggcggg tatgccgctg caaaacattg ccgatgcggc
    37141 gggacaggtc agtcaggcgg ggattatccc cgtgttcaac aaaggtttgg aaggcggtgc
    37201 gaagattgcg ctttcttatg cgatgcttgg tgcgtttgcg atggcgatta cccattccgg
    37261 cctgccgcag cagcttgccg gcgcggtcgt ccgcaagctg aaccggggcg gtatgcccga
    37321 cagcgtgcgt tcgggcgagg gcgcggtcaa atggctgctg ctttccatca tccttgtgat
    37381 gggcattatg agtcagaacg tcatacccat ccacatcgcc tttatcccga tgattgttcc
    37441 gccgctgctt ttggtgttta accgcctgaa aatcgaccgc cgcctgattg cgtgcgtcat
    37501 cactttcggg ctggttacga cttatatgtt cctgccttac ggcttcggcg cgattttttt
    37561 gaacgaaatc ctgttgggca acatccattc cgccgcgccg cagcttgatg tgaaaaacat
    37621 caacgtgatg gcggcaatgg cgattcccgc attgggaatg ctggccggac tcctgctggc
    37681 gtttgtccac taccgcaaac cgcgactgta ccaaagcaac aatgccgata cggcgggcaa
    37741 cgccgatgcg gcaaaccgtc cgcagccgtc cgcctaccgc agcctggttg ccgccgccgc
    37801 catcgccgta tgctttgcca tacagttgat gtatgaagat tcgctggtgt tgggcgcgat
    37861 gctcggtttc gccgtattta tgatgttggg ggtcattaac cgcgacaagg caaacgacgt
    37921 attcggcgaa ggcatcaaga tgatggcgat ggtcggcttc attatgattg ccgcgcaggg
    37981 ttttgccgcc gtgatgaatg cgaccgggca tattcagccg ctggtggaaa gcagtatggc
    38041 gatattcggc aacagcaaag gtatggcggc gttggcgatg ctggtggtgg ggcttttggt
    38101 aacgatgggc atcggttcgt ccttttccac tttgccgatt attgccgcga tttatgtgcc
    38161 gctgtgtacc ggtttgggct tttcgccgct tgccaccgcc gccattgtcg gcacggcggg
    38221 ggcgttgggc gatgccggtt cgcccgcgtc cgattccacg ctgggcccga cgatggggct
    38281 gaacgccgac gggcggcacg accatatccg cgattccgtc atcccgacct tcatccacta
    38341 caacatcccg cttctgattg ccggctggat tgccgcgatg gtgctgtaaa tggacgcggt
    38401 tcaagagttg gaacgccgta ttgtcgaact ggaaatccaa accgcgcttc aggaggacgt
    38461 aatctccggt ctgaacgcga tggtggcgga attgcggcag acgttggatt tgcagcaggc
    38521 tcagttgagg ctgctgtatc aaaaaatgca ggacaggaat cccgacgcgc aagagccgta
    38581 ttccctgcgc gacgagattc cgccgcatta ttgatgcgcc gccgtatccg gatttcctta
    38641 aataaaggct gtgtttgaat attccgccgg tgcaacccta agatgtaacc ttaatcagtc
    38701 ggacaaaatg ccttttatcc gatgaaaccg gttcttgtcc gaacggcgat gagcggcttc
    38761 ccccgctgca aacagataaa accaaccggg tattcaaaca cagccaaaaa aagccgtccg
    38821 aacccaaagg ggacagacgg ccaaacacat tacggggaaa acgtcttact caatgagtct
    38881 gcgaaacaga cattgctaaa acaactgcaa ttataaggta agtttatttt tttgcaaaga
    38941 aatgtaaatt tttaaatttt taaaaccgtt ccgccgcatc cgttcggatg ccgtctgaaa
    39001 cggcggcagg gttttaccgt gccgcgccgc aaaccgggca ttcggggttg cgcggcaggt
    39061 cgaaatattg ccagccccct tccaaggcac ggtaaaccgc cagcctgccg tgcgacggtt
    39121 cgcccgcttc cagcaggatt ttcagagcct ccgccgcctg tgtgcagccg acgatgccga
    39181 ccagcggcga gagcacgccg aagagggaac agatgccgtc tgaagccgat ccgccgtcga
    39241 acaggcaggc gtaacacggc gagtcgggca agtcgggacg gtatgcggca agctgtcctt
    39301 caaaacgtac cgccgcccct gaaaccagcg gtgttttcgt ttgcacgcag gcacggttga
    39361 ccgcctgccg cgtggcgtag ttgtcgcagc agtctaaaac gatgtcggcg gtttgaacca
    39421 aaccggtcag gcggcagccg tcgagttttt cgttgacggc gcggacatcg acagtatggt
    39481 tgatgcgttt caggcggcct gccaaggttt cggctttagg cttgccgaca tcgccctcgt
    39541 caaatgcgac ttggcgttgc aggttgtgca gctcgaccgt gtcggaatcg gctatggtca
    39601 gcgtgccgac gcccgaggcg gcgagatagg gcagggcggc ggcgcccaat ccgccgcagc
    39661 cgacgaccaa aatatgcgcg gcggaaagct tctgctgccc ttcgatgccg atttcgtcca
    39721 agaggatgtg gcggctgtac cgcagcagga gtgcgtcgtc gttgtcgtgt tcggtcgcgg
    39781 tcatgatgat gttcggaaaa aacagttgcg ggcgattgta acgccgccgt cgggcggcgt
    39841 tcaacttcag acggcatttc gggacatgag tggttaaagt gtgaacggtt tggcacggat
    39901 gcggcatttg aggtacattt acagtattta cggcaatgag aggaaaatca tgcaactgca
    39961 tatcctgaac aatccgaagg acgcggcttt ggcggcggac gcggaatttt tgaaacagtc
    40021 cctgttcaac ctcctgcacg aagaagcctc gccgttggtt gtcgaaacgg tcaaactctt
    40081 gtccacttcc gacgacagcg cggcattgat tgaaaaagta ttgccgcaat tggacgaacg
    40141 gcagacctac gatctgacgc ttgcctgcgg gctgttcgcc cagattctga atatcgccga
    40201 agacgtgcac cacgaacgcc gccgccaaat ccacgaagat gccggccaca acgcagcaga
    40261 aggcagcctg acggaaaccg tccgcaggct caaagcgggg aaagccgacg gcaaatcggt
    40321 gcagcggcag ttggacaata cgtccgttac cgccgttttg accgcgcacc cgaccgaagt
    40381 gcaacgccaa accgttttga atttcaaccg ccgcatccgc gcgctgctgc cgcaacgcga
    40441 acgctgcacc aatgccgacg cgctggcacg gctgcgccgc gaaatcgaca ccgtgcttct
    40501 gggcttgtgg cagaccagcg aaacgcgccg ccacaaactc agcgtcaacg acgaaatcaa
    40561 caacggcgtg tccatcttcc cgatgagctt ttttgaagcc ctgcccaaac tctaccgcaa
    40621 gatggaacac gactttcaga cggcctatcc cgatgtccgc gttccgaaca tccttaaaat
    40681 cggcggctgg atcggcggcg accgcgacgg caatccgttt gtttctggcg aaaccctgcg
    40741 ctttgccttc cgccgccacg ccgatgccgt gttccgtttt taccgcagcg aactcgacaa
    40801 actttaccgc gaactgccgc tttccatccg ccgcgtcaaa gtcaacgacg acgtaatggc
    40861 actggcagcc ctctcgcctg acgaagaaat cgcccgcacc gaagaacctt accgccgcgc
    40921 cattgcctac attatggcgc gcgctatggg caaagcgcgc tcgctcggtt tgggcatggg
    40981 ctgcaaattc ggctttctcg agccttatgc ttcggcccaa aaatttctcg atgatttgaa
    41041 aaaattgcaa cgttccctta tcgacaacgg cagccgcctg cttgccgaag gccgtttggc
    41101 agacctcatc cgttccgtgt ccgtgttcgg cttccacatg atgccgctcg acctgcgcca
    41161 acacgcaggc aaacacgccg atgtggttgc cgagcttttc caacacgcag gcttggaaga
    41221 ctacaacagc ctgaacgaag agcaaaaaca agccgccttg ttgcgcgaat tgagtcacca
    41281 acgtccgctg tacagcccgt tcatcacata cagcgaccat acccgccgcg aattggcgat
    41341 tttcaacgaa gcgcgcaaaa tcaaagacga attcggcgaa gatgccttaa cacaaagcat
    41401 tatttccaac tgcgaacaac ccggcgacct gctcgccttg gcattgctgc tgaaagaaag
    41461 cggcctgttg gcggtggaaa acggcaaacc gcacagccgc atcaacatcg tgcctctgtt
    41521 tgaaaccatc gaagcgctcg aaaatgcctg tccggtcatg gaaaccatgt tccgcctcga
    41581 ctggtatgat gccctgctcg aaagccgcgg caacatccaa gaaatcatgc tcggctattc
    41641 cgactccaac aaagacggcg gctacgttac cagctcatgg tgtctgcatc aggcggaatt
    41701 gggcttggtc gaactcttca aaaaatacga tgtccgtatg cgcctgttcc acggtcgagg
    41761 cggcagcgtc ggacgcggcg gcggcccgtc ttaccaagcc atcttggcgc aacccgcagg
    41821 cagcgttgcc ggacaaatcc gcattaccga gcaaggcgaa gtcatcaccg ccaaatacgc
    41881 cgaccccggc aacgcccaac gcaacttgga aaccttggtt gccgcgactt tggaagccag
    41941 catcctgccg gataaaaaag accctgatgc gaaactgatg caggcattgt cggacgtatc
    42001 gttcaaatac taccgcgaac tgattaccca ccccgacttc atcgactact tcctgcaaac
    42061 cagcccgatt caggaaatcg ccaccctcaa cctcggcagc cgtcccgcca gccgcaaaac
    42121 cctggcgcga attcaggatt tacgcgcgat tccgtgggta ttctcctgga tgcaaaaccg
    42181 cctcatgctg ccggcttggt acggtttcgg cagcgcggtg gaaaccttgt gcgaaggcag
    42241 ccccgaaacc ctcgccgccc tgcgcggaca cgcccaaaac aaccccttct tccaagcgat
    42301 gctctccaat atggaacaag tgatggcgaa aaccgacatc accttggcgg aaaactacgc
    42361 cggtttgagc gaatcacccg aaaaggcaaa agtcatcttc ggcatgatta aggaagaata
    42421 ccgacgcagc cgcaaagccc tgctcgacct gctgcaaacc gaagaacttt tgcgcgacaa
    42481 ccgcagcctc gcccgttcgc tcgctttgag gattccatac ctgaacgcgc tcaacggttt
    42541 gcaagtcgcc atgctcaaac gcctgcgcaa agaacccgac aatccgcacg ccctgctgat
    42601 ggtgcacctg accatcaacg gcgtggcgca aggtttgcgc aataccggct gatagtgccg
    42661 catcggggta aaatgccgtc tgaacgcctt tcagacggca tttacctgac cgcacttgca
    42721 gagaaacacc gattgtttta aagtgaacgg cagtgatatg ttgaaagacg accaatgaaa
    42781 attaccgtta tcggcgcagg ttcgtggggt acggcgctcg ccctgcattt ttcccaacac
    42841 ggcaaccgcg tatccctgtg gacgcgcaac gcagaccaag tccgccaaat gcaggaagcg
    42901 cgtgaaaaca aacgcggact gcccggcttt tcctttcccg aaaccttgga agtgtgtgcg
    42961 gatttggcag aggcgctcaa agacagcgga cttgtcctta tcgtaacctc cgttgccgga
    43021 ttgagaagca gcgcagagct gctcaaacag tacggcgcgg gacacctccc cgtcctcgcc
    43081 gcctgcaaag gcttcgagca ggatacaggg ctgctgacct tccaagtctt gaaagaagta
    43141 ttgcccgaca ataagaaaat cggcgtactt tccggtccga gttttgcaca ggaactcgcc
    43201 aaacaactgc cctgcgccgt cgtcctcgcc tccgaaaacc aagagtggat tgaagaactc
    43261 gtaccgcagc tcaacacgac cgtcatgagg ctttacggca gtaccgacgt tatcggcgtg
    43321 gcagtaggcg gttcagtcaa aaacgtcatg gcaatcgcta ccggactctc cgacggactc
    43381 gaatacggac tcaacgcccg tgccgcactg gttacgcgcg gactggccga aatcacccgc
    43441 cttgcctccg caatgggcgc gcagcccaaa accatgatgg ggcttgccgg catcggcgat
    43501 ctcatcttga cctgtaccgg tgcactttcg cgcaaccgcc gcgtcggctt gggtttggca
    43561 gaaggcaagg aactgcatca ggtgctggtc gaaatcgggc acgtttccga aggggtcagc
    43621 accatagaag aagtcttcaa taccgcctgc aaataccaaa tcgatatgcc gattacccaa
    43681 accctgctgc aactcatccg caaagaaatg acccctcagc aggtcgtcga aaggctgatg
    43741 gaacgcagcg cgcgtttcga ataaacaaca aacagatgcc gtctgaaccc ccagacggca
    43801 tacagacagg taaggtcatg aaacaaaata tcgaaaaact cgaaagcagc gtttatacgt
    43861 tggtacaaaa attcgaaacc ctcgtcagcg aaaaccgccg cctcaaagaa accgtcgccg
    43921 aactcgaacg ggcgcacgag cggcaaaaac tcgaacacga gaccgccgtc gacgaactca
    43981 gcgaagccct gctcgtccaa gtcggcaaac tcaaagaaga cctgcaaaac aaaatcgaca
    44041 gcctgacgga agaaaatgca cgataccgcg ccctgctcga acagagcagg gagaaaatca
    44101 gcgcactggc agcgcgcctc ccccaacggc aggaaacgca gcaataagga ttaaaggatg
    44161 aacatcgaac aagtctacat cgaagtcatg cacgcccggc tgaccgtcaa cacgccggca
    44221 gaagaaaaag acacactgtt gcaggcagtc ggaatgctca acggcaaagc cgaagccatc
    44281 cgcgaaggcg gccgcgtcgc ggacagcgaa aaaatcgtca ttatggccgc gctcaacgtc
    44341 gtccacgacc tattgaaaac ctccctgaac ggcggcgatt tggcaatcgg cgattttgcg
    44401 cgtaaaataa ccgatatgga caacgcctgc caaaaggcac tatcccgctt ggggcaggaa
    44461 taaccccttt ttccctgcgg tgtccgcgaa ggcatatatt cctttgaacc aataagttcg
    44521 cttaaggttg ccgggagcag tagtgggcgc gagcgtcctt ttgcggacgc acccgaaact
    44581 acccgaggca gccgccttgt cagcaaggtt caagcggatt cggccgaaac ggctctcgcg
    44641 gggattccca ttcaaaaccg catcgcaacg atgcggtttt tcacattggc cgccgccccg
    44701 cccgaaaaag cagtatgcag tctgccgaaa tccggaaaat ccttccgtaa cgcggtaatg
    44761 cgattgacaa aatcaaatcc tgtctttaaa atccataact ttctatatct atctggattt
    44821 ccactatgaa aaccttttca gcgaaacctc acgaggtgaa gcgcgaatgg ttcgtcatcg
    44881 atgcccaaga caaagtcttg ggtcgcgttg caaccgaagt cgccagccgt ctgcgtggca
    44941 aacacaaacc tgaatacacc ccccacgtcg ataccggcga ttacatcatc gtcatcaatg
    45001 cggacaaact gcgtgtaacc ggtgccaaat tcgaagataa aaaatacttc cgccattccg
    45061 gttttccagg cggcatctac gagcgcactt tccgcgaaat gcaagatcaa ttcccgggcc
    45121 gcgctttgga gcaggctgta aaaggtatgc tgcccaaagg tccgctgggt tacgccatga
    45181 ttaaaaaact gaaagtgtac gctggtgcgg agcatgccca tgctgcgcaa caacccaaag
    45241 ttttggaact gaaataataa ggacacgaca tgaacggtaa atactactac ggcacaggcc
    45301 gccgcaaaag ttcagtggct cgtgtattcc tgactaaagg tacgggtcaa atcatcgtaa
    45361 acggccgtcc cgttgacgaa ttcttcgcac gcgaaaccag ccgtatggtt gtccgccaac
    45421 ctctggttct gactgaaaac gccgaatctc tcgacatcaa agtaaatgtt gtcggcggcg
    45481 gcgaaaccgg ccagtccggc gcaatccgcc acggtattac ccgtgccctg attgattttg
    45541 acgctgcttt gaaacccgcc ttgtctcaag ccggtttcgt tacccgcgat gcgcgcgaag
    45601 tcgaacgtaa aaaaccgggt ctgcgcaaag cacgccgtgc aaaacaattc tccaaacgtt
    45661 gattttggaa attcaaaaaa ccctgcttat cgcagggttt tttatttgta acaggcggtt
    45721 tcccattggt aatctaaaga ttacggattg ggcaaaaatc aaaaacagca ccagtatcga
    45781 ctacacggac gaactgaccg tcagggatgg ctgttactgg agaggacatc gtatttctac
    45841 tttgtaaaat aacttttaat ttatttagag ttattgaaaa aatagaacgg ctatttcaac
    45901 tagcctataa aaatggcaat ctattagggt tagcataggt gtcaccgccg ccgttcaagc
    45961 cgatcagtaa aggaacagtt tcctagtttt tagctaacct gtattatata atggggagaa
    46021 tatcttaaat aaccaagcat ccttaatcat aatttagaga aattattttt tcagagtcta
    46081 acccttttaa tatgattaac ttattaactt tatctatttc ccagtctgat attatatcgg
    46141 tagatactga attctctctt attaaatttt
//
LOCUS       DAXFZM010000005        43122 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.005, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000005 DAXFZM010000000
VERSION     DAXFZM010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 43122)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 43122)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..43122
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.005"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(202..1041)
                     /locus_tag="ACFJAG_000196"
     CDS             complement(202..1041)
                     /locus_tag="ACFJAG_000196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HFC3979605.1"
                     /translation="MKQLRDNKAQGSALFTLVSGIVIVIAVLYFLIKLAGSGSFGDVD
                     ATTEAATQTRIQPVGQLTMGDGIPVGERQGEQIFGKICIQCHAADSNVPNAPKLEHNG
                     DWAPRIAQGFDTLFQHALNGFNAMPAKGGAADLTDQELKRAITYMANKSGGSFPNPDE
                     AAPADNAASGTASAPADSAAPAEAKAEDKGAAAPAVGVDGKKVFEATCQVCHGGSIPG
                     IPGIGKKDDWAPRIKKGKETLHKHALEGFNAMPAKGGNAGLSDDEVKAAVDYMANQSG
                     AKF"
     gene            1326..1401
                     /locus_tag="ACFJAG_000197"
     tRNA            1326..1401
                     /locus_tag="ACFJAG_000197"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1359..1361,aa:Arg,seq:ccg)
     gene            complement(1466..2659)
                     /locus_tag="ACFJAG_000198"
     CDS             complement(1466..2659)
                     /locus_tag="ACFJAG_000198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid transaminase"
                     /protein_id="HFC3979606.1"
                     /translation="MYRHIEYYPGDPILSLVETFKNDPRPEKVNLSIGIYFDDEGRMP
                     VLESVSRAETARTAVPAPSPYLPMEGLDVYRSAVQHLLFGKGNPALAQGRIVTVQTLG
                     GSGALKVGADFLHRWFPEARAYVSDPTWDNHRGIFEGAGFEVGTYPYYDPATVGVKFD
                     EMTAFFNTLPENSVLILHPCCHNPTGVDMSERQWDEVLQIIKTRKLIPFMDIAYQGFG
                     GDLDSDAYAVRKAVEMDLPLFVSNSFSKNLSLYGERVGGLSVVCPNKEEADLVFGQLK
                     FTVRRIYSSPPAHGAYIAADVMNSSELYALWQNEVYMMRDRIRAMRQKLYGVLTARIP
                     DRDFTYFIKQRGMFGYTGLSVGQVRRLRDEFAVYLLDSGRMCVAGLNTSNITYVADAL
                     AEVLK"
     gene            complement(2679..3767)
                     /gene="trmA"
                     /locus_tag="ACFJAG_000199"
     CDS             complement(2679..3767)
                     /gene="trmA"
                     /locus_tag="ACFJAG_000199"
                     /EC_number="2.1.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030697 - tRNA
                     (uracil(54)-C5)-methyltransferase activity, S-adenosyl
                     methionine-dependent [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (uridine(54)-C5)-methyltransferase TrmA"
                     /protein_id="HFC3979607.1"
                     /translation="MNDYTQQLQGKKDYLKTLFAGLDVPEWEVYESPDKHYRMRAEFR
                     IWHEGGEMFYAMFEKGQKASGASLIRCDRFDAASEAVNCLMPELIAVAAQSAELRNHW
                     YAVEFLSTLSGEMLVTMIYHKRLDDEWMKAAQALQQQLDISVIGRSRGQKIVLKQDYV
                     TETLRVGDRDFHYRQIEGSFTQPNAAVCRKMLEWACRAAEGLGGDLLELYCGNGNFTL
                     PLSRYFRQVLATEISKTSVSAAQWNIEANWIGNIKIPRLSAEEFTEAYTGKREFTRLK
                     ESGIVLTDYAFSTIFVDPPRAGIDEETLKLVSQFDNIIYISCNPETLRANLDTLTETH
                     TVGRAALFDQFPFTHHIESGVLLKKKIL"
     gene            3914..5014
                     /gene="aroC"
                     /locus_tag="ACFJAG_000200"
     CDS             3914..5014
                     /gene="aroC"
                     /locus_tag="ACFJAG_000200"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004107 - chorismate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HFC3979608.1"
                     /translation="MAGNTFGQIFTVTTFGESHGAGLGCIIDGCPPGLELSEADIQFD
                     LDRRKPGTSRHVTQRREADQVEILSGVFEGKTTGTPIALLIRNTDQRSKDYGNIATAF
                     RPGHADYTYWHKYGTRDYRGGGRSSARETAARVAAGAVAKKWLKEKFGTEITAYVTQV
                     GEKKIRFEGSEHISQNPFFAANQSQIAELEHYMDGVRKSLDSVGAKLHIEAANVPVGL
                     GEPVFDRLDAEIAYAMMGINAVKGVEIGAGFDSVTQRGSEHGDELTPQGFLSNHSGGI
                     LGGISTGQDICVNIAIKPTSSIATPRRSIDIHGNPVELATRGRHDPCVGLRAAPIAEA
                     MLALVLIDHALRHRAQNADVAADTPDISRSDK"
     gene            5105..5530
                     /locus_tag="ACFJAG_000201"
     CDS             5105..5530
                     /locus_tag="ACFJAG_000201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ProQ/FINO family protein"
                     /protein_id="HFC3979609.1"
                     /translation="MTQETALGAALKSAVQTMSKKKQTEMIADHIYGKYDVFKRFKPL
                     ALGIDQDLIAALPQYDSALIARVLANHCRRPRYLKALARGGKRFDLNNRFKGEVTPEE
                     QAIAQNHPFVQQALQQQSAQAAAETPSVEAEAAESSAAE"
     gene            complement(5604..7589)
                     /locus_tag="ACFJAG_000202"
     CDS             complement(5604..7589)
                     /locus_tag="ACFJAG_000202"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HFC3979610.1"
                     /translation="MAKNNQYSESSITVLKGLEPVKERPGMYTRTDSPTHICQEVIDN
                     AADEALGGFATEIDVQIHEDGSLSVRDNGRGIPVGLHPEEGVPVVELVFTRLHAGGKF
                     NKKDGGSAYAFSGGLHGVGVSVTNALSTRLEVSVKRDGKVHRIVFAGGDVVEPLAQVG
                     KCAVKDSGTEVRVWPDGKYFESPNYSIPELERLLRAKAVLLPGVRVSLTRPVKGEDEA
                     HTQTWHYPDGLKSYLTDLIADAQEAVPLFSCENYISDGHNGDFSIGEGAAFALTWLEE
                     GSCANESYVNLIPTSLGGTHEAGLKQAVFNAVNNFINLHNLLPRGVKVQSDDVFGKTA
                     FVLSARVLDPQFQGQTKDKLTNRDALKLVAAVSGDPLELWLNQNVDFGKKIAELAIRQ
                     AQARIRSVKKIEKKKGSGVAILPGKLTDCESEDIRENELFLVEGHSAGGSAKLARDKA
                     TQAILPLRGKVLNSFEVHPDQLFGNAEIHDISVAIGVDPHAINDHPDLSGLRYGKIAI
                     LSDADVDGSHIQVLLLTLFYRHFPKLVADGHIYVAQPPLFRVDVNAQGKSKPARKFYA
                     LDQNELDGILERLQKEGVKETAYSISRFKGLGEMNPDQLKDTTMHPDTRRLLQVQIPE
                     GADDETRDIFVKLMGKGEAAARRAWMEREGDTAQLDI"
     gene            complement(7656..8204)
                     /locus_tag="ACFJAG_000203"
     CDS             complement(7656..8204)
                     /locus_tag="ACFJAG_000203"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HFC3979611.1"
                     /translation="MNLTEGDTVLDREGYRPNVGIILINERNEVFWGKRVREHSWQFP
                     QGGIKPGESPETAMYRELYEEVGLLPQHVKIVGRTRDWLRYDVPNNWVRREWRGSYRG
                     QKQIWYLLRLTGRDCDVNLRATRHPEFDGWRWHQYWAPVDEVIDFKRDVYLGALKELS
                     SRFLRGMESYEDFAARQPSGNR"
     gene            8346..9641
                     /gene="serS"
                     /locus_tag="ACFJAG_000204"
     CDS             8346..9641
                     /gene="serS"
                     /locus_tag="ACFJAG_000204"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004828 - serine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006434 - seryl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HFC3979612.1"
                     /translation="MLDIQLLRSNTAAVAERLARRDYDFDTARFDALEERRKSVQVKT
                     EELQASRNSISKQIGALKGQGKHEEAQAAMDQVAQIKTDLEQAAADLDAVQKELDAWL
                     LSIPNLPHESVPPGKDETENVEVRKVGTPREFDFEIKDHVDLGEPLGLDFEGGAKLSG
                     ARFTVMRGQIARLHRALAQFMLDTHMLQHGYTEHYTPYIVDDTTLQGTGQLPKFAEDL
                     FHVTRGGDETKTTQYLIPTAEVTLTNTVAGSIIPSEQLPLKLTAHSPCFRSEAGSYGK
                     DTRGLIRQHQFDKVEMVQIVHPEKSYGALEEMVGHAENILKALELPYRVITLCTGDMG
                     FSAAKTYDLEVWVPAQNTYREISSCSNCEDFQARRMKARFKDENGKNRLVHTLNGSGL
                     AVGRTLVAVLENHQNADGSINIPAALQPYMGGVTKLEVK"
     gene            complement(9714..10712)
                     /locus_tag="ACFJAG_000205"
     CDS             complement(9714..10712)
                     /locus_tag="ACFJAG_000205"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008720 - D-lactate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0070404 - NADH binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacid dehydrogenase"
                     /protein_id="HFC3979613.1"
                     /translation="MKIAIYGTKSYDREHFTRANRHFGFELEFFDFMLDAKTAKMAEG
                     AEAACIFVNDDASRPVLEKLAQIGVKTVALRCAGFNNVDLKAAEELGLKVVRVPAYSP
                     ESVAEHTVGLMLTLNRRIHKAYQRTRDANFSLEGLTGFNMYGKTAGVIGTGKIGIATM
                     RILKGFGMNLLAYDPFCNPEVEKLGGRYVDLDELYARSDIITLHCPATPENHYMLNEA
                     AFDKMKDGVMIINTSRGGLIDSAAAIEALKCRKIGALGMDVYENERELFFEDKSNDVI
                     TDDVFRRLSSCHNVLFTGHQAFLTEEALGNISEVTLSNIREVGQTGDCGNAVRADG"
     gene            complement(10837..11913)
                     /gene="prfA"
                     /locus_tag="ACFJAG_000206"
     CDS             complement(10837..11913)
                     /gene="prfA"
                     /locus_tag="ACFJAG_000206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003790927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016149 - translation release factor
                     activity, codon specific [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HFC3979614.1"
                     /translation="MKPSILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAE
                     LTPVVEVFQNYRLAQSDLADAEEMLSDPEMKDFAAEEIEAAKAKIDELDTELQKLLLP
                     KDADDDKNIFIEIRAGTGGGEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYK
                     EVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELN
                     PADLRTDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAA
                     RLNDAQKREVQAKEAAERKSLIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMD
                     GDLAEITDALIAEHQAELLAAMGD"
     gene            complement(12003..12773)
                     /locus_tag="ACFJAG_000207"
     CDS             complement(12003..12773)
                     /locus_tag="ACFJAG_000207"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HFC3979615.1"
                     /translation="MRLTDTHCHLADSVLRGNLAQVLAEARQAGVWRFIVPATCPQDW
                     QDVAELSEMPSEHGQIRIALGIHPWFSDGIAEQDFSGLEAVLVRYPRAWVGEIGLDFY
                     DKTQTPPQRERQIQVFSRQLAIAQTLRRRVIIHNLKATADIAAAVKQTGFTQGGIVHA
                     FSGSAEEARVLTKLGFKIGIGSLLLNPNARKVRDTLKALNDGDFVLETDSPFMLENTV
                     NTPANILRIAEIAAEIRGTGAAEIAAITERNADSLLRP"
     gene            complement(12776..13768)
                     /locus_tag="ACFJAG_000208"
     CDS             complement(12776..13768)
                     /locus_tag="ACFJAG_000208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HFC3979616.1"
                     /translation="MKQKIFVLYTGGTIGMTQSSAGLRPDTALVGQALAPFSDGMDFD
                     WDVCEPLIDSSAVQLQNWCAWLDIIAAALPQYDGVLVLHGTDTLAYTANMFALALQGL
                     DKPIVLTGSQWPYNAEGSDAPRNLVTAVAAFPLGLKQTLIAFDGKLYPAVGSSKISTE
                     TAAGFGNAHFGALAEWDETRGWHNVRIPNQDAADVSDGLEIRYPDPQAKIAVRTLIPG
                     FAVQELADGLGQLPAQALILQSYGHGNTSAGEGFIRAVQDFTQQGKLLLNISQVPQGC
                     AAAVYAQGDALRRAGVVNGGKCNLETATALMTLAVSEGWGADGVKHELQRLGLV"
     gene            complement(13835..14518)
                     /locus_tag="ACFJAG_000209"
     CDS             complement(13835..14518)
                     /locus_tag="ACFJAG_000209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HFC3979617.1"
                     /translation="MFALLEAFFVEYGYAAVFFVLVICGFGVPIPEDLTLVTGGVISG
                     MGYTNPHIMFAVGMLGVLAGDGVMFAAGRIWGQKILKFKPIARIMTPKRYAQVQEKFD
                     KYGNWVLFVARFLPGLRTAVFVTAGISRKVSYLRFLIMDGLAALISVPVWIYLGEYGA
                     HNIDWLMAKMHSLQSGIFIALGVLAAALAWFWWRKRRHYQLYRAQLSEKRAKRKAEKA
                     AKKAAQKQQ"
     gene            complement(14707..16041)
                     /gene="glmM"
                     /locus_tag="ACFJAG_000210"
     CDS             complement(14707..16041)
                     /gene="glmM"
                     /locus_tag="ACFJAG_000210"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008966 - phosphoglucosamine mutase
                     activity [Evidence IEA];
                     GO_function: GO:0016868 - intramolecular
                     phosphotransferase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HFC3979618.1"
                     /translation="MAKKYFGTDGVRGEVGQFPITPDFVLKLGYAAGQVLVQHDTDQK
                     PTVLIGKDTRISGYMLEAALVAGFTAAGVNVVQTGPLPTPGVAYLTRALRLSAGVMIS
                     ASHNTYSDNGIKFFAEGGVKLSDEVELEIEAKIDEEMKTQPSARLGRARRISGADDRY
                     IEFCKSTFPGHSDLRGLKLVIDTANGAGYGVAPKVFHELGAQVVSIGNEPNGYNINEK
                     CGATHTKTLQAAVLQNEADYGIALDGDGDRLMMVDKNRQVYDGDSLIYVIAKARAREG
                     INIGGVVGTVMTNMAMEIALKEQGVDFCRAKVGDRYVLEQLNQRGWLIGGEASGHILC
                     MDKHNTGDGIISALQVLAALQILNQDLAAVCADWQPYPQTMINVRIQKGQKWQEASKD
                     VLAEVEKELEGKGRVVLRASGTEPVVRVMVEARQADWARDGAERIAAAIGGI"
     gene            complement(16171..17025)
                     /gene="folP"
                     /locus_tag="ACFJAG_000211"
     CDS             complement(16171..17025)
                     /gene="folP"
                     /locus_tag="ACFJAG_000211"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004156 - dihydropteroate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HFC3979619.1"
                     /translation="MARHVWRAGRFEIGLDKPKIMGIVNLTPDSFSDGGAYSQNAQTA
                     LAHAERLLKEGADILDIGGESTRPGADFVPPEEEEWARVEPVLAEAAGWGVPVSLDTR
                     RTVVMEKALALGGIDIINDVAALTDEGAVELLARQADTGICLMHMRGLPETMQDNPKY
                     QDVVGEVARYLKTRSETCVAAGIAPQRITLDPGFGFGKNLQHNIALMRHLPELMAETG
                     LPLLIGVSRKSMIGELTGEADAAARVHGSVAAALASVARGAQIVRVHDVKATADALKV
                     WEALGVNR"
     gene            complement(17165..18058)
                     /locus_tag="ACFJAG_000212"
     CDS             complement(17165..18058)
                     /locus_tag="ACFJAG_000212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HFC3979620.1"
                     /translation="MIIVMSRRAAEADIAGVVAFIRSRGLREHISHGDERTVIGAIGD
                     DRVLSVREVQTLPEVEKAVRILDTWKTVSRENRAEDSRVAAKGVAFGGGETVRIAAEP
                     SVWSNADAVFLDPFFTSANLYDTLSADEGRGRCRRLAEQAASAHGAGKPVLVRVRNVR
                     HVEAALNAGADILYLGGGLMSDLAVLNEAGSLNIPLVLCKDKHHSAEDWLNAAEYVVS
                     RGNRHLILGESGVLGHTKGHPYRLDVESIVKVRQISHLPVIANITGLWSRDMPQEILY
                     GLAKAAGACGIVGTCFEKAGG"
     gene            18149..20251
                     /locus_tag="ACFJAG_000213"
     CDS             18149..20251
                     /locus_tag="ACFJAG_000213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HFC3979621.1"
                     /translation="MDLLSVFHKYRLKYAVAVLTMLLLAAVGLHASVYRTFTPENIRS
                     RLQQSIAHTHRKISFDADIRRRLLPRPTVILKNLTITEPDGGRVAVSVKETKIGLSWK
                     NLWSDRIQVEKWVVSGADLALTRDRNGAWNIQDLFDGAKHSASVNRIIVENSTVRLNF
                     LQQQLILKEISLNLQSPDSSGQQFESSGILVWRKLSVPWKSRGLFLSDGIGTPEISPF
                     HFEASTSLDGHGITISTTGSPSVRFNAGGADAAGLGLRADTSFRNLHLTAQIPALALK
                     NNSIKTGTVNGTFTAGGEYARWDGSFKLDKANLHSGIANIGNAEISGSFKTPRLQTNF
                     SLGSPLVWSRDNGLDAPRLHISTLQDTVDRLPQPRFISRLDGSLSIPNLQNWNAELNG
                     TFDRQPVAAKFKYTREGAPRLEAAAALQKLNLAPYLDEFRQQNGKIFPDILGRLSGNV
                     EAHLKIGSIQLPGLQLDDMETYLHADKDHIALSRFKSGLYGGHTEGGISIANTRPATY
                     RLQQNASNIQIQPLLQDLFGFHSFSGNGDAVIDLTASGENRKQLIRSLQGSLSLNISN
                     GAWHGIDMDSILKNGLSGKISGSTPFYRFTLNSEISDGISRHIDTELFSDSLYVTSNG
                     YTNLDTQELSEDVLIRNAVHPKNKPIPLKITGTVDKPSITVDYGRLTGGINSRKEKQK
                     ILEDTLLEQWQWLKPKEP"
     gene            complement(20315..21793)
                     /gene="ubiD"
                     /locus_tag="ACFJAG_000214"
     CDS             complement(20315..21793)
                     /gene="ubiD"
                     /locus_tag="ACFJAG_000214"
                     /EC_number="4.1.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-polyprenylbenzoate decarboxylase"
                     /protein_id="HFC3979622.1"
                     /translation="MKYKDLRDFIAMLEQQGKLKRVAHPVSPHLEMTEIADRVLRAEG
                     PALLFENPVKPDGTRYDYPVLANLFGTPERVAMGMGADSVSKLREIGQTLAYLKEPEP
                     PKGIKDAFSKLPLLKDIWSMAPNVVKNAPCQEIVWEGEDVDLYQLPIQHCWPEDVAPL
                     VTWGLTVTRGPHKKRQNLGIYRQQLIGKNKLVMRWLPHRGGALDYQEFRKLNPDTPYP
                     VAVVLGCDPSTILGAVTPVPDTLSEYQFAGLLRGSRTELVKCIGSDLQVPARAEIVLE
                     GVIHPNETALEGPYGDHTGYYNEQGHFPVFTVERITMRENPIYHSTYTGKPPDEPAVL
                     GVALNEVFVPLLQKQFSEITDFYLPPEGCSYRMAVVSMKKQYAGHAKRVMTGCWSFLR
                     QFMYTKFIIVVDDDVNVRDWKEVIWAVTTRMDPVRDTVLVENTPIDYLDFASPVSGLG
                     GKMGLDATSKWPGETDREWGRVIKKDPAVTVKIDGIWGKLGL"
     gene            complement(21813..22328)
                     /locus_tag="ACFJAG_000215"
     CDS             complement(21813..22328)
                     /locus_tag="ACFJAG_000215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2199 domain-containing protein"
                     /protein_id="HFC3979623.1"
                     /translation="MHTCTSCGEKHEDMPATGFTAPYPYNQLSEEERIAYQAECDSDF
                     CIIRYSDQTDRFIRAALPIPIIGHQETLEYGVWVSVSEKSFNDYQSRFYDNPENAVYF
                     GMICNRLPPYETDTFGLHCNVVTQSDNQRPLLQLHQSGGHPPVRDFYHGMGYAEAQAR
                     IGAVSESDCSG"
     gene            complement(22335..22652)
                     /locus_tag="ACFJAG_000216"
     CDS             complement(22335..22652)
                     /locus_tag="ACFJAG_000216"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979624.1"
                     /translation="MYWYPVLVNLMMLAVFGSSLFAGQTVIEKLARLQQPDLPEKAVR
                     YTRRVTQVWCVFFIANGTLAALLARLGRYDWWAVYTGVIAYVLMGMLFAGEWLYRKLV
                     LKV"
     gene            complement(22719..22871)
                     /locus_tag="ACFJAG_000217"
     CDS             complement(22719..22871)
                     /locus_tag="ACFJAG_000217"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979625.1"
                     /translation="MKPGFFGHIFLTVLSIAYPALWYSGLNLNRYGVASPCRTICTVC
                     GFAALS"
     gene            complement(22947..23030)
                     /locus_tag="ACFJAG_000218"
                     /pseudo
     CDS             complement(22947..23030)
                     /locus_tag="ACFJAG_000218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222119.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
     gene            complement(23033..23775)
                     /locus_tag="ACFJAG_000219"
                     /pseudo
     CDS             complement(23033..23775)
                     /locus_tag="ACFJAG_000219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714696.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase chain length factor"
     gene            23976..24403
                     /locus_tag="ACFJAG_000220"
                     /pseudo
     CDS             23976..24403
                     /locus_tag="ACFJAG_000220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677797.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="thioester dehydrase"
     gene            24441..25170
                     /gene="fabG"
                     /locus_tag="ACFJAG_000221"
                     /pseudo
     CDS             24441..25170
                     /gene="fabG"
                     /locus_tag="ACFJAG_000221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448581.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
     gene            25164..26509
                     /locus_tag="ACFJAG_000222"
                     /pseudo
     CDS             25164..26509
                     /locus_tag="ACFJAG_000222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714702.1,RefSeq:WP_003762767.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-[acyl-carrier-protein] synthase"
     gene            26563..26638
                     /locus_tag="ACFJAG_000223"
     tRNA            26563..26638
                     /locus_tag="ACFJAG_000223"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:26596..26598,aa:Ile,seq:cat)
     gene            26713..27471
                     /locus_tag="ACFJAG_000224"
     CDS             26713..27471
                     /locus_tag="ACFJAG_000224"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HFC3979626.1"
                     /translation="MKKVSVLIVAKNEANHIRECIESCRFDKEVIVIDDHSADNTAEI
                     AEGLGAKVFRRHLNGDFGAQKTFAIEQAGGEWVFLIDADERCTPELSDEISKIVRTGD
                     YAAYFVERRNLFPNHPATHGAMRPDSVCRLMPKKGGSVQGKVHETVQTPYPERRLKHF
                     MYHYTYDNWEQYFNKFNKYTSISAEKYREQGKPVSFVRDIILRPIWGFFKIYILNKGF
                     LDGKMGWIMSVNHSYYTMIKYVKLYYLYKSGGKF"
     gene            27472..28536
                     /locus_tag="ACFJAG_000225"
     CDS             27472..28536
                     /locus_tag="ACFJAG_000225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HFC3979627.1"
                     /translation="MEKEFRILNIVSAKIWGGGEQYVYDVSKALGLRGCTMFTAVNKN
                     DELMRRRFSEVSSVFTTRLHTFNGLFSLYALTRFIRENHISHLMIHTGKIAALSVLLK
                     KLTGVRLIFVKHNVVANKTDFYHRLIQKNTDRFICVSRLVYDVQTADNPFKEKYRIVH
                     NGIDTGRFPPSQEKPDSRFFTVAYAGRISPEKGLENLIEACVILHRKYPQIRLKLAGH
                     GHPDYMCRLKRGVSASGAEPFVSFEGFTEKLASFYRQSDVVVLPSLVPEAFGLSLCEA
                     MYCRTAVISNTLGAQKEIIEHHQSGILLDRLTPESLADEIERLVLNPEAKNALATAGH
                     QCVAARFTINHTADKLLDAI"
     gene            28770..30107
                     /locus_tag="ACFJAG_000226"
     CDS             28770..30107
                     /locus_tag="ACFJAG_000226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HFC3979628.1"
                     /translation="MSNHTSWSSKIGFVLAAAGSAIGLGAIWKFPYTAGTNGGAVFFL
                     LFLIFTVLVALPVQLAEFYIGRTGGKNAVDSFRVLRPGTQWLWVGRMGVAACFILLSF
                     YSVVGGWVLNYVVHSFTGAIHAGADFEALFGTTISNPAGSLSYQALFMLITVWVVKGG
                     ISDGIEKANRYLMPGLFILFIALAVRSLTLPDAMEGVSFLLKPNWSYFKADTMITALG
                     QAFFALSIGVSAMITYASYLGKDQDMFRSGHTIMWMNLLVSLLAGLVIFPAVFAFGFE
                     PNQGPGLIFIVLPAVFMKMPFGTVLFAVFMLLVVFATLTSAFSMLETVIASTIRQDER
                     KRKKHTWLIGTAIFIVGIPSALSFGAWGEFKVFGKTIFDLWDYVISAVIMPIGALSVS
                     IFTAWIQDKQSVLKDAGAGSTVPRAVLLLWLNTLRYLAPIAIIIVFVNFLGIL"
     gene            complement(30282..31295)
                     /locus_tag="ACFJAG_000227"
     CDS             complement(30282..31295)
                     /locus_tag="ACFJAG_000227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0017013 - protein flavinylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HFC3979629.1"
                     /translation="MGRHFGRRRFLTAAAVAVAGAAVSFLPNPFAAGGEKRNMDKKRD
                     ENVFFWKGVALGSGAELRLFGVDDRQAADLVNKVLAEVARLEKMFSLYREDSLISRLN
                     RDGYLTSPPADFLELLSLCRDIHALTEGAFDPTVQALWKLYADYFAARPDAETPPENS
                     VKETLKRVGFGKVSFDDREIRFAEKGMGLSLNGIAQGYITDKVVALLKANGVPAALVD
                     MGEIRGFDTNGRRMWNVGIRNPDDEEGVLANITVKDKAFATSGGYGTVMDKAGRLTHL
                     FDPRTGVSTPRYKSMSVMADDAAVADALSTAFSVMDLPLIRSVAESRRLKVRLAMPDN
                     IVD"
     gene            complement(31304..32098)
                     /locus_tag="ACFJAG_000228"
     CDS             complement(31304..32098)
                     /locus_tag="ACFJAG_000228"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004799 - thymidylate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006231 - dTMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HFC3979630.1"
                     /translation="MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPL
                     LTTKKLHLRSIIHELLWFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWP
                     APDGRHIDQIANVVEQIKKNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLS
                     CQLYQRSADIFLGVPFNIASYALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAAL
                     QLEREPRALPVMKINPEVKDLFAFKFEDFELEGYDPHPHIKAVVSV"
     gene            32522..33856
                     /gene="gdhA"
                     /locus_tag="ACFJAG_000229"
     CDS             32522..33856
                     /gene="gdhA"
                     /locus_tag="ACFJAG_000229"
                     /EC_number="1.4.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016639 - oxidoreductase activity, acting
                     on the CH-NH2 group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-specific glutamate dehydrogenase"
                     /protein_id="HFC3979631.1"
                     /translation="MTDLNTLFANLKQRNPNQEPFHQAVEEVFMSLDPFLAKNPKYTQ
                     QSLLERIVEPERVVMFRVTWQDDKGQVQVNRGYRVQMSSAIGPYKGGLRFHPTVDLGV
                     LKFLAFEQVFKNALTTLPMGGGKGGSDFDPKGKSDAEVMRFCQAFMTELYRHIGADTD
                     VPAGDIGVGGREIGYLFGQYKKIRNEFTSVLTGKGLEWGGSLIRPEATGYGCVYFAQA
                     MLQTRNDSFEGKRVLISGSGNVAQYAAEKAIQLGAKVLTVSDSDGFVLFPDIGMTEAQ
                     LAALIELKEVRRERVATYAKEQGLQYFENQKPWGVAAEIALPCATQNELDEEAAKTLL
                     ANGCYVVAEGANMPSTLGAVEQFIKAGILYAPGKASNAGGVATSGLEMSQNAIRLSWT
                     REEVDSRLFGIMQSIHESCLKYGKVGDKVNYVNGANIAGFVKVADAMLAQGF"
     gene            33951..34057
                     /locus_tag="ACFJAG_000230"
                     /pseudo
     CDS             33951..34057
                     /locus_tag="ACFJAG_000230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(34095..34874)
                     /locus_tag="ACFJAG_000231"
     CDS             complement(34095..34874)
                     /locus_tag="ACFJAG_000231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FadR/GntR family transcriptional regulator"
                     /protein_id="HFC3979632.1"
                     /translation="MKLVRPQKISDQVLSVLEGRIVEGVYAEGGKIPPERVLAEEFGV
                     SRPSVRSALNILVARQILEARQGDGYYVSVKPQQDFLQSWQELLGKHSNWEQDVFDFS
                     CHIEGCMAALAAERRTDADLKRIRFWLEKFEEACGSGNLEHQGEADVSFHQTIADAAH
                     NLLFSHLSGGLLKMLYRQTRSSLIYLNQEEDPRPKLMAQHRVLYEAISNRRPGEASEA
                     AKAHLNYVASSILKDREYQSRNRHADTLAQNDLKRVQDWEV"
     gene            35224..35430
                     /locus_tag="ACFJAG_000232"
                     /pseudo
     CDS             35224..35430
                     /locus_tag="ACFJAG_000232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311098.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015129 - lactate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015727 - lactate transport [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
     gene            35436..35628
                     /locus_tag="ACFJAG_000233"
                     /pseudo
     CDS             35436..35628
                     /locus_tag="ACFJAG_000233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003757319.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(35829..37232)
                     /gene="mtrE"
                     /locus_tag="ACFJAG_000234"
     CDS             complement(35829..37232)
                     /gene="mtrE"
                     /locus_tag="ACFJAG_000234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter outer membrane
                     subunit MtrE"
                     /protein_id="HFC3979633.1"
                     /translation="MNTTLKTTLTSVAAAFALSACTMIPQYEQPKVEVAETFQNDTSV
                     SSIRAVDLGWHDYFADPRLQKLIDIALERNTSLRTAVLNSEIYRKQYMIERNNLLPTL
                     AANANGSRQGSLSGGNVSSSYNVGLGAASYELDLFGRVRSSSEAALQGYFASVANRDA
                     AHLSLIATVAKAYFNERYAEEAMSLAQRVLKTREETYKLSELRYKAGVISAVALRQQE
                     ALIESAKADYAHAARSREQARNALGTLINRPIPEDLPAGLPLDKQFFVEKLPAGLSSE
                     VLLDRPDIRAAEHALKQANANIGAARAAFFPSIRLTGSVGTGSVELGGLFKSGTGVWA
                     FAPSITLPIFTWGTNKANLDVAKLRQQAQIVAYESAVQSAFQDVANALAAREQLDKAY
                     DALSKQSRASKEALRLVGLRYKHGVSGALDLLDAERSSYSAEGAALSAQLTRAENLAD
                     LYKALGGGLKRDTQTGK"
     gene            complement(37285..40488)
                     /gene="mtrD"
                     /locus_tag="ACFJAG_000235"
     CDS             complement(37285..40488)
                     /gene="mtrD"
                     /locus_tag="ACFJAG_000235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit MtrD"
                     /protein_id="HFC3979634.1"
                     /translation="MAKFFIDRPIFAWVISIFIIAAGIFGIKSLPVSQYPSVAAPTIT
                     LHAIYPGASAQVMEGSVLSVIERNMNGVEGLDYMSTSADSSGSGSVSLTFTPDTDENL
                     AQVEVQNKLSEVLSTLPATVQQYGVTVSKARSNFLMIVMLSSDVQSTEEMNDYAQRNV
                     VPELQRIEGVGQVRLFGAQRAMRIWVDPKKLQNYNLSFADVGSALSAQNIQISAGSIG
                     SLPAVRGQTVTATVTAQGQLGTAEEFGNVILRANTDGSNIYLKDVAKVGLGMEDYSSS
                     TRLNGVNTTGMAVMLSNSGNAMATAKAVKERLAVLEKYFPQGMSWKTPYDTSKFVEIS
                     IEKVIHTLIEAMVLVFVVMYLFLQNIRYTLIPTIVVPISLLGGFAFISYMGMSINVLT
                     MFAMTLVIGIVVDDAIVVVENVERIMAGEGLPPKEATKKAMGQISGAVIGITAVLISV
                     FVPLAMFSGAAGNIYKQFALTMASSIAFSAFLALTLTPALCATMLKTIPKGHHEEKKG
                     FFGWFNKKFDSWTHGYEGRVAKVLRKTFRMMVVYIGLAVVGVFLFMRLPTSFLPTEDQ
                     GFVMVSVQLPAGATKERTDATLAQVTQLAKSIPEIENIITVSGFSFSGSGQNMAMGFA
                     ILKDWNERTASGSDAVAVAGKLTGMMMGTLKDGFGIAVVPPPILELGNGSGLSINLQD
                     RNNTGHTALLAKRNELIQKMRASGLFDPSTVRAGGLEDSPQLKIDINRAAAAAQGISF
                     ADIRTALASALSSSYVSDFPNQGRLQRVMVQADEDARMQPADILNLTVPNKSGVAVPL
                     STIATVSWENGTEQSVRFNGYPSMKLSASPATGVSTGQAMAAVQKMVDELGGGYSFEW
                     GGQSREEAKGGSQTLILYGLAVAAVFLVLAALYESWSIPLAVILVIPLGLIGAAAGVT
                     GRNLFEGLLGSVPSFANDIYFQVGFVTVMGLSAKNAILIIEFAKDLQAQGKSAVEAAL
                     EAARLRFRPIIMTSFAFILGVVPLYIAAGASSASQRAIGTTVFWGMLIGTLLSVFLVP
                     LFYVVVRKFFKETAHEHEMAVRHASKAGITGSDDKQY"
     gene            complement(40500..41738)
                     /gene="mtrC"
                     /locus_tag="ACFJAG_000236"
     CDS             complement(40500..41738)
                     /gene="mtrC"
                     /locus_tag="ACFJAG_000236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter periplasmic
                     adaptor subunit MtrC"
                     /protein_id="HFC3979635.1"
                     /translation="MAFYASKAMRAAALAAAVALALSSCGKGGDAAQGGQPAGREAPA
                     PVVGVVTVHPQTVALTVELPGRLESLRTADVRAQVGGIIQKRLFQEGSYVRAGQPLYQ
                     IDSSTYEAGLESARAQLATAQATLAKADADLARYKPLVSADAISKQEYDAAVTAKRSA
                     EAGVKAAQAAIKSAGINLNRSRITAPISGFIGQSKVSEGTLLNAGDTTVLATIRQTNP
                     MYVNVTQSASEVMKLRRQIAEGKLLAADGAIAVGIKFDDGTVYPEKGRLLFADPTVDE
                     STGQITLRAAVSNDQNILMPGLYVRVLMDQVAADNAFIVPQQAVTRGAKDTVMIVNAQ
                     GGMEPREVTVAQQQGTNWIVTSGLKDGDKVVVEGISIAGMTGAKKVTPKEWAPSENQA
                     AAPQAGVQTASEAKPASEAK"
     gene            41989..42621
                     /gene="mtrR"
                     /locus_tag="ACFJAG_000237"
     CDS             41989..42621
                     /gene="mtrR"
                     /locus_tag="ACFJAG_000237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux system transcriptional
                     repressor MtrR"
                     /protein_id="HFC3979636.1"
                     /translation="MRKTKTEALKTKEHLMLAALETFYRKGIARTSLNEIAQAAGVTR
                     GALYWHFKNKEDLFDALFQRICDDIENCIAQDAANAEGGSWAVFRHTLLHFFERLQSN
                     DIYYKFHNILFLKCEHTEQNAAVIAIARKHQAIWREKITAVLTEAVENQDLADDLDKE
                     TAVIFIKSTLDGLIWRWFSSGESFDLGKTAPRIIGIMMDNLENHPCLRRK"
     gene            complement(42714..42926)
                     /locus_tag="ACFJAG_000238"
     CDS             complement(42714..42926)
                     /locus_tag="ACFJAG_000238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979637.1"
                     /translation="MKNEIQKIMDKYDPWHEDDFESYEDIAKDVSLMTDKTFIEHYLL
                     EVYSEENGHFDQDNVHAMIGEIKNAI"
BASE COUNT         9999 a        12302 c        11112 g         9709 t
ORIGIN      
        1 aacaaatggg ttaaaccagt atccatacat cagctttttt atcatcctac tttttattca
       61 tccgatcggg cagacagatt tcaaagatga aaagcctatt ctattcacac ccatttgatg
      121 tcatttccac acggacgaac aaataaattc ccataaaaaa acggagcaga tacctgcccc
      181 gttttttaat ttaatccgaa tttagaattt tgcaccggat tggtttgcca tatagtcaac
      241 agccgctttg acttcgtcat cgctcaaacc tgcattgccg cctttggccg gcatcgcgtt
      301 aaagccttca agggcatgtt tgtgcaaggt ttctttgcct tttttgatac gcggtgccca
      361 atcgtctttt ttgcctatgc cgggaatacc gggaatcgaa ccgccgtggc acacctgaca
      421 ggttgcttcg aagacttttt taccgtcaac gccgaccgca ggggctgccg cacccttgtc
      481 ttctgccttc gcttctgccg gagctgcact atcggcagga gcagaagctg ttcctgaagc
      541 ggcattgtcg gcaggcgcag cctcatcagg attcgggaaa gaaccgccgc ttttattcgc
      601 catgtaggta atcgcccgtt tgagttcctg atcggtcagg tctgccgcac cgcctttggc
      661 aggcatggcg ttaaagccgt tcagcgcgtg ttggaacaag gtatcgaagc cttgcgcgat
      721 acgcggcgcc cagtcgccgt tgtgttccag tttcggagcg ttcggcacat tgctgtccgc
      781 cgcgtggcat tggatacaga ttttgccgaa aatctgttcg ccttggcgtt cgccgacggg
      841 gatgccgtca cccatcgtca attgtccgac aggctggatg cgggtctgcg ttgccgcttc
      901 cgtagtggca tcgacatcgc cgaacgatcc actgcccgcc agcttaatca ggaaataaag
      961 gactgcaata acaataacga taccgctcac aagggtaaac agtgcagagc cttgggcttt
     1021 gttgtcgcgg agttgtttca tttggtaggc ctcgccgtca ggttaggttg tgctgtagat
     1081 tatagtttgg cgtgttaaac acagttaaca atattttgct ggattatact gaattcacag
     1141 ggtctttcca atcgctatca ttgaaaatat gaaaaaattt gccaatggta tctgtacaaa
     1201 acaaataatc cgttgaaaat accggattat ctccaagaaa actccccttg tgccgccata
     1261 cgccgcctgc cggcgcaaga taacctttgc caatttgcag aatttacgtt aaccttacgt
     1321 tttccgcacc catagctcag ttggaagagt gtcagtttcc gaagctggag gtcacaggtt
     1381 cgatccctgt tgggtgcgcc aattataaag aggccgtctg aaagataaat atttttcaga
     1441 cggccttttg acttacttca aattcttatt tcaacacttc ggcaagcgca tcggcgacat
     1501 aagtgatatt tgatgtattc agcccggcga cgcacatcct gccggaatcc agcaggtaaa
     1561 cggcaaattc gtcgcgcaac ctgcggactt gccccacgct caaccccgtg tagccgaaca
     1621 ttccgcgctg tttgatgaaa taagtgaaat cgcggtcggg gattcgggcg gtcaatacgc
     1681 cgtaaagttt ctgccgcatc gcacggatgc ggtcgcgcat catataaact tcgttttgcc
     1741 acaaggcgta aagttcggag ctgttcatca cgtcggcggc gatatacgcg ccgtgcgcgg
     1801 gcgggctgga gtagatgcgg cggacggtga atttgagttg tccgaacacc aaatccgctt
     1861 cttctttatt ggggcaaacc acgcttaagc cgccgacgcg ttcgccgtag agcgacaggt
     1921 tttttgaaaa cgaattgctg acaaacagcg gcaaatccat ttccaccgct ttgcggacgg
     1981 cgtaggcatc gctgtccaaa tcgccgccga agccttggta ggcgatgtcc ataaacggaa
     2041 tcagtttgcg cgttttgatg atctgcaaca cttcgtccca ttgccgttcc gacatatcca
     2101 cgccggtcgg gttgtggcag cagggatgga ggatgaggac gctgttttcg ggcagggtgt
     2161 tgaaaaacgc ggtcatttcg tcgaatttca cgccgacagt ggcagggtcg taatatgggt
     2221 aagtgccgac ctcgaaacct gcgccttcaa aaatgccgcg atggttgtcc caagtcggat
     2281 cgctgacgta ggcgcgcgct tcgggaaacc agcggtgcag gaaatccgcc ccgactttga
     2341 gcgcgcccga gccgcccaga gtctgtacgg taacgatgcg tccctgcgcg agcgcggggt
     2401 tgcctttgcc gaacaacaaa tgctgcaccg cgctgcggta aacgtccaaa ccttccatcg
     2461 gcaggtaggg cgacggcgca ggcacagcgg tgcgggcggt ttcggcacgg cttacggatt
     2521 ccaatacggg cattctgcct tcgtcgtcga aataaatgcc tatgctcaaa ttgacttttt
     2581 cggggcgcgg gtcgtttttg aaggtttcga ccaaactcaa aatcgggtcg ccgggatagt
     2641 attcgatgtg tcggtacata gtccttacct tttgcttttc aaaggatttt ctttttcaac
     2701 agtacgccgc tttcgatatg gtgcgtaaac gggaattggt cgaacagggc ggcacgtccg
     2761 accgtatggg tttccgtcaa ggtgtccaaa ttggcgcgca gcgtttcggg attgcaggaa
     2821 atgtagatga tgttgtcgaa ctgcgacacc agcttcaaag tttcctcatc gatgccggca
     2881 cgcggcggat cgacgaaaat agtggaaaat gcgtaatccg tcaaaacaat accgctctcc
     2941 ttaaggcgtg taaactcacg ttttccggta taggcttcgg taaactcctc agcagacagg
     3001 cgggggattt tgatgttgcc tatccagttt gcctcaatat tccattgcgc cgcactgacg
     3061 gaggttttgg agatttcggt tgccaaaacc tgtcggaaat atcgggacag cggcagggtg
     3121 aaattgccgt tgccgcaata cagttcgagc aggtcgccgc ccaagccttc cgccgcgcgg
     3181 cacgcccatt cgagcatttt ccggcataca gcggcattcg gctgggtaaa gctgccttcg
     3241 atttggcggt agtggaaatc gcggtcgccg acgcgcaggg tttccgtcac atagtcctgt
     3301 tttaagacta ttttctgccc cctgctccgc ccgataacgg aaatatccaa ctgttgctgt
     3361 aacgcttgcg ccgccttcat ccactcatca tcaagccttt tgtggtaaat catggtaacc
     3421 agcatttccc cgctgagcgt ggacagaaat tcgacggcat accaatggtt tctcagttcg
     3481 gcagattggg cggcaacggc aatcaattcg ggcatcaggc agttgactgc ctctgaagca
     3541 gcatcgaaac ggtcgcaacg gatcaggctt gccccgctag ccttctgccc tttttcaaac
     3601 atggcgtaaa acatttcacc gccttcgtgc caaatgcgga attcggcgcg catgcggtag
     3661 tgtttgtccg gagattcgta cacttcccac tcaggaacat ccaaacctgc aaaaagggtt
     3721 ttaaggtagt cttttttacc ttgaagctgc tgcgtgtagt cattcatatc gctatcctga
     3781 aaaatcaggc cggattataa gccgattttc ctcgccgcac gcaaactctt tgactgccgc
     3841 cccttcaatg acggacgggc ttttgtgcta aaatccgcca tctttccaca ctataccgat
     3901 aaagggaaaa atcatggcag gcaacacttt cggacaaatc ttcaccgtga ccaccttcgg
     3961 cgaaagccac ggcgcgggtt tgggctgcat catcgacggc tgcccgcccg gcttggaatt
     4021 aagcgaagcg gatatccaat ttgacctcga ccggcgcaaa cccggcacca gccgccacgt
     4081 tacccaacgc cgcgaagccg accaagtcga aatcctctcc ggcgtattcg aaggcaaaac
     4141 caccggcaca cccatcgccc tcctaatccg caacaccgac cagcgcagca aagactacgg
     4201 caacatcgcc accgccttcc gccccggaca cgccgactat acctattggc acaaatacgg
     4261 tacgcgcgac taccggggcg gcggcaggag ttccgcccgc gaaaccgcag cccgcgttgc
     4321 cgccggagcc gttgccaaaa aatggctgaa agaaaaattc ggcacggaaa tcaccgccta
     4381 cgttacccaa gtcggcgaaa aaaaaatccg gtttgaaggc agcgaacaca tttcccaaaa
     4441 tccttttttt gccgccaacc aaagccaaat cgccgaactg gaacactata tggacggtgt
     4501 gcgcaaatcc ttggattccg tcggcgcgaa actgcatatc gaagccgcca acgtccccgt
     4561 cggtttgggc gaacccgttt tcgaccgcct cgatgccgaa atcgcctacg cgatgatggg
     4621 catcaacgcc gtcaaaggcg tggaaatcgg cgcaggtttt gacagcgtaa cgcaacgcgg
     4681 cagcgaacac ggcgacgaac tgaccccgca aggcttcctg tccaaccatt cgggcggcat
     4741 cctcggcggc atcagcaccg ggcaagacat ctgcgtcaat atcgccatca aacccaccag
     4801 ctccatcgcc acaccgcgcc gaagcatcga cattcacggc aaccccgtcg aactcgccac
     4861 ccgcggcagg cacgatccct gcgtcggctt gcgcgccgcg ccgattgccg aagctatgct
     4921 cgccttggtt ttaatcgacc acgccctgcg ccatcgtgcg caaaatgcgg atgttgccgc
     4981 ggatacgccc gatatttccc gctcggacaa gtaaaaagat ttagccaaaa cacgggcttt
     5041 atactaaaat accgaccatt gccgtgccgt ctgaacgcac gattcttaga ggaatacaac
     5101 cgaaatgaca caagaaaccg ctttgggcgc ggcactgaaa tccgccgtcc aaactatgag
     5161 caaaaagaaa cagaccgaaa tgatcgccga ccacatctac ggcaaatacg atgtattcaa
     5221 acgcttcaaa ccgttggcgc tcggcatcga tcaggatttg attgccgctt tgccgcaata
     5281 cgattccgca ctgattgcac gcgtcctcgc caaccactgc cgccgtccgc gctatctgaa
     5341 agccttggcg cgcggcggca aacgtttcga tttgaacaac cgtttcaaag gcgaagttac
     5401 ccccgaagaa caggcgattg cgcaaaacca tcctttcgtg cagcaggctt tgcaacagca
     5461 gtccgcccaa gctgccgccg aaacgccgtc tgttgaagcc gaagcagccg aatcttccgc
     5521 agcagaataa atccccaaac gaaatgccgt ctgaaaaccg atttggtttc agacggcatt
     5581 ttttcgtatg cggcaatcac ggctcaaata tcgagttgcg ccgtatcgcc ttcgcgttcc
     5641 atccaagcgc ggcgggcggc ggcttcgcct ttgcccatca gtttgacgaa gatgtcgcgc
     5701 gtctcgtcat ccgcgccttc ggggatttgc acctgcaaca ggcggcgggt gtcggggtgc
     5761 atggtggtgt ctttgagctg gtcggggttc atctcgccca agcctttgaa acggctgatg
     5821 gaataggcgg tttctttaac gccttctttt tgcagccgct ctaaaatgcc gtcaagttcg
     5881 ttttggtcga gggcgtagaa tttgcgggcg ggtttgcttt tgccttgtgc gttgacatcg
     5941 acgcggaaca gcggcggctg ggcgacgtag atgtgtccgt cggcgaccag tttggggaag
     6001 tggcggtaga acagggtcaa cagcaaaacc tgaatatgcg aaccgtccac gtcggcatcg
     6061 gacaagatgg ctattttgcc gtagcgcagg ccgcttaagt cgggatggtc gttgatggcg
     6121 tgcggatcga caccgatggc gacggaaatg tcgtggattt cggcgttgcc gaaaagctgg
     6181 tcggggtgga cttcaaagct attgagcact ttgccgcgca ggggcaggat ggcttgtgtg
     6241 gctttgtcgc gggcgagttt ggcggagccg ccggcggaat ggccttcgac gaggaagagt
     6301 tcgttttcgc ggatgtcttc gctttcacag tcggtcagct taccgggcag gatggcgacg
     6361 ccgctgcctt ttttcttttc gattttttta accgaacgta tccgtgcctg tgcctgacgg
     6421 atggcgagtt cggcgatttt tttgccgaag tccacgtttt ggttcagcca caattccaaa
     6481 ggatcgcccg atacggcggc gacaagtttc agcgcgtcgc ggttggtcag cttgtctttg
     6541 gtctgacctt ggaattgcgg gtcgaggacg cgggcggaga ggacgaaggc ggtttttccg
     6601 aacacgtcgt cgctttgcac tttaacgccg cgcggtaaga ggttgtgcag gttgatgaag
     6661 ttgttgacgg cgttgaacac ggcttgtttc aagcctgctt cgtgcgttcc gcccagcgag
     6721 gtcgggataa ggttgacgta gctttcgttg gcgcacgagc cttcttccag ccaagtcaaa
     6781 gcaaacgcgg caccttcgcc aatgctgaaa tcgccgttgt ggccgtctga aatgtagttt
     6841 tcgcaggaga acagcggcac ggcttcctgt gcgtcggcaa tcaggtcggt cagatagctt
     6901 ttcagaccgt cggggtaatg ccaggtttgg gtgtgcgctt cgtcttcgcc tttgaccgga
     6961 cgggtcaggg aaacgcgcac gcccggcagc agcacggctt tggcgcgcaa tagacgctcg
     7021 agttcgggaa tgctgtaatt cgggctttca aaatatttgc cgtccggcca cacgcgcact
     7081 tcggtgccgc tgtctttgac ggcgcatttg cccacttgtg ccaacggttc gaccacatcg
     7141 ccgccggcaa acacgatgcg gtggactttg ccgtctcgtt tgacactgac ttcaagtcgg
     7201 gtggaaagcg cgttggtaac ggatacgccc acaccgtgca ggccgcctga aaaggcatac
     7261 gcactgccgc cgtctttttt gttgaacttg ccgcccgcgt gcaggcgggt aaacacgagt
     7321 tcgactacgg gtacgccttc ttcagggtgc aggccgacgg gaatgccgcg cccgttgtcg
     7381 cgcacggaaa gcgaaccgtc ttcatgaatt tgcacgtcga tttcagtggc gaaaccgccc
     7441 aacgcctcgt ccgccgcgtt gtcgatgact tcttggcaga tatgtgtcgg gctgtcggtg
     7501 cgggtgtaca tgccgggacg ttctttgacc ggctccaagc ctttgaggac ggtgatgctg
     7561 gattcgctgt attggttgtt tttagccata ggaataatct gaaagtaaga aaaacaacgc
     7621 tttcagacgg cctgaaagcg ttgcgttccg ttgttttacc ggttgccgga aggttggcgg
     7681 gcggcaaagt cttcataact ttccataccg cgcaggaagc gggaagagag ttctttcaac
     7741 gcccccaaat aaacgtcgcg tttgaaatca atcacttcgt caacgggcgc ccaatattga
     7801 tgccaacgcc agccgtcaaa ttcggggtgg cgggtggcgc gcaggttgac atcgcaatcc
     7861 cggccggtca ggcgcaggag ataccaaatc tgcttctgcc cgcgataaga gccgcgccat
     7921 tcgcggcgca cccagttgtt cggcacgtcg taacgcagcc agtcgcgcgt ccgcccgacg
     7981 attttgacgt gttgcggcag aagtccgact tcttcgtaaa gttcgcggta catcgcggtt
     8041 tcggggcttt cgccgggctt gatgccgcct tgaggaaact gccatgaatg ttcgcgcacg
     8101 cgcttacccc aaaagacttc gttacgttcg ttaattagga taataccgac attggggcga
     8161 tagccttccc tgtccaacac ggtgtcgccc tccgttaaat tcaatcttgg gattttccca
     8221 caaatcggac ggttttgaca aatcggacgg tatggttcaa gcatgtcgaa acacggacgg
     8281 attcgggaaa atatcttaaa tttggtttac aataatacgt ttcaaattaa ttccggaatc
     8341 agactatgtt agatatccaa ttgctccgca gcaacaccgc cgccgttgcc gaacggcttg
     8401 cacggcgcga ttatgacttt gataccgcac gttttgacgc actggaagaa cgacgcaagt
     8461 ccgttcaggt gaaaaccgaa gaactacaag cctcgcgcaa cagcatttcc aaacaaatcg
     8521 gcgcactgaa aggtcagggc aaacatgaag aggcgcaggc ggccatggat caagtcgccc
     8581 aaatcaaaac cgatttggaa caggctgccg ccgatttgga tgccgttcaa aaagaattgg
     8641 acgcatggtt gttgagcata cctaacctgc cgcacgaaag cgtacctccc ggtaaagacg
     8701 aaaccgaaaa cgtcgaagtc cgcaaagtcg gtacgccgcg cgaatttgat tttgaaatca
     8761 aagatcatgt cgatttgggc gagcctttgg gcttggattt cgaaggcggc gcgaaacttt
     8821 ccggcgcacg atttaccgtg atgcgcggac aaatcgcccg tctgcaccgc gccttggcgc
     8881 aattcatgct cgatacgcac atgctgcaac acggctacac cgagcattac acgccttata
     8941 tcgttgacga tacgacgctg caaggcacag gtcagctgcc caaatttgca gaagatttgt
     9001 tccacgttac ccgcggcggc gatgaaacca aaaccacgca atatctgatt ccgacagccg
     9061 aagttaccct gaccaatacc gttgccggca gcattatccc gtccgaacaa ctgccgctga
     9121 agctgaccgc gcattcgccc tgtttccgca gtgaagcggg atcatacggc aaagacacgc
     9181 gcggcctaat ccgccagcac cagttcgaca aagtagaaat ggtacaaatc gttcatcccg
     9241 aaaaatcata cggcgcgctg gaagaaatgg tcggccatgc cgaaaacatc ctgaaggctt
     9301 tggaactgcc ctaccgcgtg attaccctgt gtaccggcga catgggtttc agcgcggcca
     9361 aaacgtatga cttggaagtt tgggttcccg cacaaaatac ctaccgcgaa atctcaagct
     9421 gctccaactg cgaagatttc caagcacgcc gcatgaaggc gcgtttcaaa gacgaaaacg
     9481 gcaaaaaccg cttggtacat accttaaacg gctccggttt ggcagtcggt cgcactttgg
     9541 tcgcggtttt ggaaaaccat caaaacgccg acggcagcat caatatcccc gccgcactgc
     9601 aaccgtatat gggcggtgtt accaagttgg aagtgaaata agccttaacc ctgaacataa
     9661 atgccgtctg aaacctgttt cagacggcat ttcctttaaa ctcttaaaac acatcaaccg
     9721 tcggcacgaa ccgcattgcc gcaatcgccg gtctgtccga cctcgcggat attggacagc
     9781 gtaacttccg aaatattacc caacgcctct tccgtcaaaa atgcctgatg tccggtaaac
     9841 agtacgttat gacaagacga caggcggcgg aacacgtcgt cggtaatcac atcgttggat
     9901 ttgtcttcaa aaaacagctc gcgctcgttc tcgtacacat ccatgcccaa tgcaccgatt
     9961 ttccggcatt tcaacgcctc gatggcggcg gcgctgtcaa tcagcccgcc ccggctggtg
    10021 ttgataatca tcacgccgtc tttcattttg tcgaacgccg cttcgttcag catatagtgg
    10081 ttttccggcg tggcgggaca atgcagcgtg atgatgtccg atcgggcata cagctcgtcc
    10141 aaatccacat acctgccgcc gagtttttcc acttcggggt tgcaaaacgg atcgtaagcc
    10201 agcaggttca taccgaaacc ctttaaaatc cgcatcgttg cgataccgat tttccccgtg
    10261 ccgataacgc ccgccgtttt gccgtacata ttgaagccgg tcagaccttc cagcgaaaaa
    10321 ttcgcatcgc gggtacgctg gtaggctttg tggatacggc ggttcaaagt cagcatcaga
    10381 ccgaccgtat gttccgcaac cgattcgggc gaataggcag gcacgcgcac gactttcaag
    10441 cccaactctt cagccgcctt caaatccaca ttattgaagc cggcacaacg caacgccaca
    10501 gttttcacgc caatttgcgc caatttttcc aacacgggcc ggctggcgtc gtcgtttaca
    10561 aaaatacagg ccgcttccgc gccttccgcc attttcgccg ttttcgcatc cagcatgaaa
    10621 tcaaaaaact ccagctcgaa gccgaaatgc cggttggcgc gggtaaaatg ttcgcggtca
    10681 tagcttttcg taccgtaaat cgcaatcttc atcaatatgt ccagttgtcg tctatggttg
    10741 agaaacggca taatacaccg aattcaaaca aatcagtaga atatggcgga ttaaaattga
    10801 tttcatgcac ggcatttcca tttcaaaaca caaaactcaa tcgcccatcg ccgccagaag
    10861 ctccgcctga tgttcggcaa tcagggcatc ggtgatttct gccaaatcgc cgtccatcac
    10921 aaaatccagc ttgtgcaggg tgaggttgat gcggtggtct gttaccctgc cttggggata
    10981 gttgtaggtg cggatgcgtt cgctgcggtc gccgctgccg atgagggatt tgcgttcggc
    11041 ggcttctttg gcttggactt cgcgtttttg cgcgtcgttc aggcgggcgg cgaggacttt
    11101 catcgcctgc gctttgttgg cgtgttggct gcggccgtct tggcattcga ccaccatgcc
    11161 tgtcggcaag tgggtaatgc ggacggcgga gtcggttttg ttaatgtgct gaccgcccgc
    11221 gccggatgcg cggaaggtat cggtgcgcag gtcggcgggg ttcagttcga tgtcttcgag
    11281 ctcgtccgct tcgggcatga cggcaacggt acaggcggag gtgtggatgc ggccttggct
    11341 ttcggtggcg gggacgcgct gcacgcggtg tccgcccgat tcaaatttca gacggctgta
    11401 cgcgccgagt ccgacaatac gggcgatgac ttctttatag ccgcccaatt cgctttcgtt
    11461 ggcggacacg atttcaacct gccagcggtt gcgttcggcg tagcggctgt acatacgcag
    11521 caaatcgccg gcaaacagcg cggcttcgcc gccgcccgtg ccggcgcgta tttcgataaa
    11581 gatgtttttg tcgtcgtcgg catctttggg cagcagcagt ttttgcaatt cggtatcgag
    11641 ttcgtcgatt ttggctttcg ccgcttcgat ttcttcggcg gcaaagtctt tcatttcggg
    11701 gtcggacaac atttcttcgg catccgccaa gtcgctttgg gcaagccgat agttttggaa
    11761 tacttcgacg acgggggtca gttcggcgtg ttcgcgcgtg agcttgcggt agttgtccat
    11821 atcggatgtg gcttcgggtt gccctaaaag gtgggtaact tcttccaacc ggtcgccgag
    11881 ttgttgcagt ttttctaaga tagacggctt cataattctt ccataacaaa cgccgcctga
    11941 atttcagacg gcatcaaaac gcggtcatta taatatattt tctgaatatt caaaaagata
    12001 atctagggac ggagcagact gtcggcattg cgttccgtta tcgcggcgat ttccgccgcg
    12061 ccggtaccgc gtatttccgc agcaatttcg gcaatccgaa gaatgttggc aggcgtattg
    12121 acggtgtttt ccaacatgaa cgggctatcc gtttccaata cgaaatcccc gtcgttcaag
    12181 gctttaagcg tatcgcgcac tttacgcgcg ttcggattga gcagcagcga accgatgccg
    12241 attttgaacc ccagttttgt caacacgcgc gcttcttccg cgctgcctga gaaagcgtga
    12301 acgatgccgc cttgagtaaa gcctgtctgt ttgacggcgg cggcgatgtc ggcggtggct
    12361 ttgagattat ggataatcac gcggcggcgc agggtttgcg cgatggcaag ctggcggcta
    12421 aaaacttgaa tttgccgttc acgctgcggc ggcgtttggg ttttgtcgta aaaatccaag
    12481 ccgatttcgc cgacccacgc tcgggggtaa cgcaccaata cggcttccaa accggaaaaa
    12541 tcctgttccg caatgccgtc tgaaaaccaa ggatggatgc ccagcgcaat acggatttga
    12601 ccgtgttcgg acggcatttc cgacagttcc gccacgtcct gccaatcctg cggacaggta
    12661 gcgggaacga taaaccgcca cacgcccgcc tgtcgcgctt cggcaagcac ctgcgccaga
    12721 ttgccgcgca aaacggaatc ggcaagatgg caatgtgtgt cggtcagcct catcttcaca
    12781 ccagccccaa ccgctgcaac tcgtgtttca ccccgtccgc gccccatcct tcggaaacgg
    12841 caagcgtcat caatgcggtt gcggtttcca aattgcattt gccgccgttg accacgcccg
    12901 cccgacgcag cgcgtcgccc tgtgcgtaaa cggcggcagc gcaaccctgc ggcacttggc
    12961 tgatgttaag caacaatttg ccttgctgcg taaagtcttg cacggcgcgg atgaagcctt
    13021 cgccggcgga ggtattgccg tgtccgtagc tttgcaggat aagggcttgg gcgggaagct
    13081 gtccgagccc gtcggcaagt tcttggacgg caaagccggg gataagcgtg cggacggcga
    13141 tttttgcctg cgggtcggga taacggattt cgaggccgtc tgaaacatct gccgcgtcct
    13201 gattcgggat gcggacattg tgccagcccc gggtttcgtc ccactcggca agtgcgccga
    13261 aatgggcatt gccgaaaccg gcggcggttt ccgtgctgat tttgctgctg ccgacggcgg
    13321 gatacagttt gccgtcaaag gcaataagcg tctgcttcaa tccgagtggg aatgcggcaa
    13381 cggcagtcac cagattgcgc ggcgcgtcgc tgccctctgc gttgtacggc cattgcgaac
    13441 cggtcaggac gatcggtttg tccaaacctt gcagggcgag ggcgaacata ttggcggtat
    13501 aggcgagtgt gtccgtgccg tgcagcacca aaacaccgtc gtactgcggc agcgcggcgg
    13561 caatgatgtc cagccaagcg caccagtttt gcagttggac ggcggaagaa tcaatcagcg
    13621 gctcacaaac gtcccaatcg aaatccatgc cgtctgaaaa cggcgcgagt gcctgcccga
    13681 ccagcgcggt atcggggcgc aagcccgcac tgctttgcgt catgccgatg gtgccgccgg
    13741 tataaaggac aaaaattttc tgtttcatgg ctcattctga aaatgcaaag accgcctgaa
    13801 acgcgaaatg cgtccggacg gtcgaaaatc cgacttactg ctgcttctgt gccgcttttt
    13861 tcgctgcctt ttccgccttg cgtttggcgc gtttttcgct caattgtgcg cggtaaagct
    13921 gataatgtcg gcgtttgcgc caccagaacc acgccagcgc cgccgccagc acgcccaatg
    13981 cgatgaagat gcccgattgc aggctgtgca ttttcgccat cagccaatcg atgttgtgcg
    14041 cgccgtactc gcccaagtaa atccaaacgg gcacggaaat cagcgcggcc agcccgtcca
    14101 taatcagaaa gcgcagatac gatactttgc ggctgatgcc ggcggtaacg aaaacggcag
    14161 tccgcaaacc cggcaggaaa cgggcgacaa acagaaccca gttgccgtat ttgtcgaatt
    14221 tttcctgaac ctgcgcgtaa cgtttcggcg tcatgatgcg cgcaatcggt ttgaacttga
    14281 ggattttctg cccccagatg cgtccggcgg caaacatcac gccgtcgccc gccaacacgc
    14341 cgagcatacc gaccgcaaac ataatgtgcg gattggtata acccataccc gaaatcacgc
    14401 cgcccgttac caaggtcaaa tcttcgggaa tcggcacgcc gaaaccgcag atgaccaaaa
    14461 cgaaaaacac ggccgcatag ccgtattcga caaaaaaggc ttccaaaagg gcaaacatag
    14521 cggatattcc attgtcggag ataaaaagtc agaacaagcc gaaacatttt ctgcgcgaaa
    14581 cggcattcta tcaaagatta tgccgtctga aagcggcagg gggggcagat tcgcgccccg
    14641 ccggacgttc agacggcatt taaacaggaa aaccgccgct gttgaaacgg ttttgcctga
    14701 ttttgcctaa atgccgccga tggcggcggc gatacgctcc gccccgtcgc gcgcccaatc
    14761 ggcctgacgc gcctcgacca tcacgcgcac gacgggttcg gttcccgaag cgcgcaacac
    14821 gacacgccct ttgccttcga gttctttttc cacttcggcc aacacgtctt tcgaagcctc
    14881 ctgccatttc tgaccctttt ggatgcgcac gttaatcatc gtttgcggat acggctgcca
    14941 gtcggcgcaa acggcggcga ggtcttggtt caggatttgc agcgccgcca agacttgcag
    15001 cgcggaaata atgccgtcgc cggtgttatg tttgtccatg cacaaaatat ggccgctggc
    15061 ttcgccgccg atgagccagc cgcgttggtt cagctgttcc aacacatagc ggtcgccgac
    15121 tttggcgcgg cagaaatcga cgccctgctc tttcagggcg atttccatcg ccatattggt
    15181 catgaccgtt ccgaccacgc cgccgatgtt gataccttct cgggcgcggg ctttggcgat
    15241 gacgtaaatc aggctgtcgc cgtcgtaaac ctgcctgttt ttatcgacca tcatcaggcg
    15301 gtcgccatcg ccgtccaagg caataccgta atcggcttcg ttttgcaaca cggcggcttg
    15361 gagggttttg gtatgggtcg cgccacattt ttcgttgatg ttgtagccgt tgggttcgtt
    15421 gccgatgctg acgacctgtg cgccgagttc gtggaacact ttgggtgcaa cgccgtatcc
    15481 tgcaccgttg gcggtatcga taaccaactt caaaccccga aggtcggaat ggccggggaa
    15541 ggtggatttg caaaactcga tatagcggtc gtccgcaccg ctgatgcggc gggcgcgtcc
    15601 gagacgtgcg gacggttggg ttttcatttc ttcatcgatt ttggcttcga tttccaactc
    15661 gacttcatcg gaaagtttca cgccgccttc ggcaaagaat ttgatgccgt tgtcggaata
    15721 ggtgttgtgc gacgcggaaa tcatcacgcc ggcggacagg cgcaatgcgc gggtcagata
    15781 agccacaccg ggcgtgggca acggcccggt ctgtaccaca ttcacacccg ccgccgtaaa
    15841 gcccgctacc agcgcggctt ccagcatata gcctgaaatg cgcgtgtctt tgccgatgag
    15901 gacggtcggt ttctgatcgg tatcgtgctg caccagcacc tgccccgccg catagccgag
    15961 tttcaataca aaatcgggcg taatcggaaa ctgaccgact tcgccgcgca cgccgtccgt
    16021 gccgaaatat ttttttgcca tcatttgctc cgtgaatgtg aaccgttgtc cgagattata
    16081 cagtcagttt gcgccctgct gcctgcaccg ttgatgccgt ctgaagccgt cccgcccttt
    16141 tcagacggca ttcggcgcaa aaaccgccgt ttaccggttc acgcccaacg cttcccacac
    16201 cttcaacgcg tccgccgtcg ccttcacatc gtgcacgcgc acgatttgcg ctccgcgtgc
    16261 cacggaagcc aaagccgctg ccacgctgcc gtgtacgcgc gccgccgcgt ccgcctcacc
    16321 ggtcagctca cctatcatgc ttttgcgcga cacaccgatc agcagcggca aaccggtttc
    16381 cgccatcaat tcgggcaaat gccgcatcag tgcgatattg tgttgcaggt tcttgccgaa
    16441 gccgaaaccc gggtcgagcg taatccgttg cggcgcgatg cctgccgcga cacaggtttc
    16501 tgaccgtgtt ttcagataac gtgccacttc gccgaccaca tcctgatatt tcggattgtc
    16561 ctgcatggtt tcgggcaagc cccgcatatg catcaggcaa atgcccgtgt ccgcctggcg
    16621 cgccagcaat tcgaccgcac cttcgtcggt caacgccgcc acatcattga taatatcgat
    16681 gccgccgagt gccaacgcct tttccataac caccgtgcgg cgcgtgtcca aactgacggg
    16741 aacgccccac cccgccgctt ccgccaatac aggctcaacc cgcgcccatt cttcttcttc
    16801 gggcggaacg aaatccgcac ccggccgcgt cgattcgccg ccgatgtcga gaatgtccgc
    16861 accctctttc aaaagccgtt cggcatgcgc caaagctgtt tgggcgtttt gcgaatacgc
    16921 gccgccgtcg gaaaaagaat cgggcgtgag attcacgatg cccatgattt tcggtttgtc
    16981 caaaccgatt tcaaaccgtc ctgcccgcca aacgtgtcgt gccatctgaa ctcctcccga
    17041 aataaaaaac agattatatg ccgtctgaaa ccgtcttgtg cgcttcggac ggcaccgcta
    17101 ttcgggcggc agacggcatg ttgtcccaat gtctgcgccg cctttgaatc tgccggcatg
    17161 cctgctatcc gcccgccttt tcaaaacagg ttccgacgat tccgcacgcg cctgccgcct
    17221 ttgccaagcc gtacaggatt tcctgcggca tatcgcggct ccataatccc gtaatattcg
    17281 caatcacggg cagatggctg atttggcgga ctttcacgat ggattcgaca tccaaacggt
    17341 agggatggcc tttggtatgg cccaacacgc ccgactcgcc cagaatcagg tggcggttgc
    17401 cgcgcgagac gacatattct gcggcattca accaatcttc ggcagaatgg tgcttgtctt
    17461 tacacagaac caagggaatg ttcaggcttc cggcttcatt caatacggca agatcggaca
    17521 tcagcccgcc gcccaaatac aggatgtccg ctcccgcatt caaagccgct tcgacatggc
    17581 ggacgttgcg aacgcgcacc aatacgggtt tccctgcgcc atgcgccgat gcggcctgtt
    17641 ccgccaaccg tctgcaccgt ccccgccctt catccgcact taaagtgtcg tataagtttg
    17701 ccgaagtgaa aaacggatcc agaaacactg catccgcatt gctccatact gacggttctg
    17761 cagcgatacg gacggtttcc ccgccgccga aagccacgcc tttggcggca acgcggctgt
    17821 cttccgcccg attttcccga ctgacggttt tccatgtgtc caaaatgcgg acggctttct
    17881 cgacctccgg cagcgtctgt acctccctga cgctcaaaac cctatcgtcg ccgattgcgc
    17941 cgatgacggt acgctcgtcg ccgtgagaaa tgtgttctcg cagacctctg ctgcggatga
    18001 aggcgacaac gccggcaatg tccgcttcgg cggcacgcct gctcatgaca ataatcatat
    18061 ttcctcctga cacaagagac ggcccgccca aaataggatt tttgcaagcc gtgttatact
    18121 gtggcgtgtt ttacagattg ttcgggctat ggatttatta tcggttttcc acaaataccg
    18181 tctgaaatat gcggtggcgg tgctgacgat gctgcttttg gcggcagtcg ggctgcacgc
    18241 ttccgtatat cgcaccttca cgcccgaaaa catccgcagc cgcctccaac aaagcattgc
    18301 ccatacccac cggaaaatct cgtttgatgc ggatatacgg cgcaggcttc tgccccgccc
    18361 gaccgtcatc ctgaaaaacc tgaccattac cgaacccgac ggcggccggg tcgccgtttc
    18421 cgtcaaagaa accaaaatcg gattgagctg gaaaaacctg tggtcggatc ggatacaggt
    18481 tgaaaaatgg gtggtttcgg gtgcggatct tgccctgacg cgcgacagaa acggcgcttg
    18541 gaacatccaa gacctgttcg acggcgcgaa acactccgcc tcagtcaacc gcattatcgt
    18601 cgaaaacagc accgtccgcc tcaatttcct gcagcaacag cttatcctga aggaaatcag
    18661 cctcaacctg caatcccccg attcgtcggg gcagcagttt gaaagttcgg gcatactggt
    18721 ttggagaaag ctgtccgtcc cgtggaaaag cagggggctg ttcctttcag acggcatcgg
    18781 cacgcccgaa atctcaccgt tccattttga agcttccact tcgctggacg gacacggcat
    18841 caccatttcc accaccggca gcccttctgt ccgcttcaac gccggcggag cggatgccgc
    18901 cggcctcggc ctgcgtgcag acacttcctt ccgcaacctc cacctgaccg cgcaaatccc
    18961 cgcactggca ctcaaaaaca acagcatcaa aaccggcacg gtcaacggca cgtttaccgc
    19021 cggcggcgaa tatgcccgat gggacggttc gttcaaactc gacaaagcca acctgcactc
    19081 cggcatcgcc aacatcggca acgccgaaat ctccggcagc ttcaaaacac cgcgccttca
    19141 aaccaatttc tccctcggct cgccgttggt ttggagtcgg gacaacgggc tggacgcccc
    19201 gcgcctgcac atatcgaccc ttcaggatac cgtcgaccgc ctgccgcaac cccgtttcat
    19261 cagccggctc gacggttcgc tgtccatacc gaatctgcaa aattggaatg ccgaattaaa
    19321 cggcacattc gaccgccaac ccgttgccgc aaaattcaaa tatacgcggg aaggcgcacc
    19381 gcgcctggaa gccgccgccg cgctgcaaaa attaaacctc gccccctatc ttgacgaatt
    19441 tcggcaacaa aacggcaaaa tattccccga catcctcggc aggctgtccg gcaacgtcga
    19501 ggcacacctc aaaatcggca gcatccaact ccccggcttg caactggacg atatggaaac
    19561 ctacctccac gccgacaaag accatatcgc gctcagccgt ttcaagtcag ggctttacgg
    19621 cggccatacc gaaggcggca tcagcatcgc caacacccgt cccgccactt accgcctgca
    19681 acagaatgca agcaacatcc aaatccaacc gctgctgcaa gacctgttcg gcttccacag
    19741 cttcagcggc aacggcgatg cggtcatcga cctgaccgca agcggcgaaa accgcaaaca
    19801 gcttatccgc tcgctgcaag gcagcctgtc gctgaatatt tccaacggag cgtggcacgg
    19861 catcgatatg gacagcattt taaaaaacgg cctttccgga aaaatctcgg gcagcacacc
    19921 cttctaccga ttcacgctca acagcgaaat ttcagacggc atcagccgcc acatcgatac
    19981 cgaactcttc tccgacagcc tctatgttac cagcaacggc tataccaatc tggatacgca
    20041 ggaattgtct gaagatgtcc ttatccgcaa cgccgtccat ccgaaaaaca aaccgattcc
    20101 cctgaaaatc accggtacgg tggacaagcc gtccattacc gtcgattacg gcaggctgac
    20161 cggcggcatc aattcgcgca aagagaaaca gaaaatcctc gaagacaccc tgctggaaca
    20221 atggcagtgg ctcaaaccta aagaaccgta aataccctgc gtacaaaaat gccgtctgaa
    20281 acacattaat cttcagacgg catgaccgta aaacctacaa ccccaatttc ccccaaatcc
    20341 catcaatttt aaccgtaacc gcagggtctt ttttgattac ccgtccccat tcgcggtcgg
    20401 tttctcccgg ccatttgctg gtcgcatcca aacccatttt gccgccgagt ccgctgacgg
    20461 ggctggcgaa gtcgaggtag tcgatgggcg tgttttccac caaaacggtg tcgcggacgg
    20521 ggtccatgcg cgtggttacc gcccagatga cttctttcca gtcgcgcacg tttacatcgt
    20581 catccaccac gatgatgaat ttggtgtaca taaactggcg caggaacgac cagcagcccg
    20641 tcatcacgcg cttggcgtgt ccggcgtact gttttttcat gctgaccacc gccatgcggt
    20701 aggaacagcc ttcgggcggc aggtagaaat cggtgatttc ggagaactgc ttttgcaaaa
    20761 gcggtacgaa cacttcgttc aacgccacgc ccaaaacggc aggttcgtcg ggcggtttgc
    20821 ctgtgtaggt agagtggtaa atcgggtttt cgcgcatggt gatgcgttcg accgtaaaca
    20881 cagggaaatg gccctgctcg ttgtaatagc ccgtgtggtc gccgtatggg ccttccaacg
    20941 cggtttcgtt tggatgaatc acgccttcca atacaatttc agcacgggca ggcacttgca
    21001 aatcgctgcc gatacatttc accagctccg tccgcgaacc gcgcagcagt ccggcaaact
    21061 ggtattcgct caaagtatcg ggaacgggcg ttaccgcgcc caaaatggtg gaggggtcgc
    21121 aaccgagtac gacggcgacg ggatacggcg tatcgggatt gagtttgcgg aattcctgat
    21181 aatccaacgc gccgccgcga tgcggcagcc agcgcataac cagcttgttt ttgccgatga
    21241 gttgttggcg gtaaatgccg agattttggc gttttttgtg cggcccgcgc gtgacggtca
    21301 agccccacgt taccagcggc gcaacgtctt ccggccagca atgttgaatc ggaagctgat
    21361 acaaatcaac gtcttctcct tcccacacga tttcctgaca cggcgcgttt ttcaccacgt
    21421 tcggcgccat gctccaaata tctttcaaca gcggcagttt ggaaaacgcg tctttgatgc
    21481 ctttgggcgg ttcgggttct ttcaaatacg ccagcgtctg cccgatttcg cgcagcttgg
    21541 acacgctgtc cgcgcccatg cccatcgcca cacgttcggg ggtgccgaac aggttcgcca
    21601 acacgggata atcatagcgc gtaccgtcgg gcttaaccgg gttttcaaac aacaacgccg
    21661 gcccttcggc gcgcaacacg cggtcggcaa tttcggtcat ttccaaatgc ggggaaacgg
    21721 ggtgggcgac gcgcttgagc ttgccctgct gctcgagcat agcgatgaag tcgcgcaggt
    21781 ctttgtattt catgtttatc ctttttgtcc ttttatcctg aacaatccga ttcggatacc
    21841 gcccctatcc ttgcctgcgc ttcggcatat cccatgccgt gataaaagtc gcgtaccggc
    21901 ggatgtccgc cgctttgatg aagttgcagc aaagggcgtt ggttgtcgga ctgggtaacg
    21961 acattgcagt gcagaccgaa ggtgtcggtt tcataagggg gcagccgatt gcaaatcata
    22021 ccgaaataaa cggcgttttc agggttgtcg taaaagcggc tttgatagtc gttaaaactc
    22081 ttttcgctga cggacaccca cacgccgtat tccaacgttt cctgatgccc gataatcgga
    22141 ataggcagcg ccgcgcggat aaagcggtcg gtttggtcgg aatagcggat gatgcagaaa
    22201 tcagaatcgc attccgcttg ataagcaatg cgttcttctt cactgagttg attataggga
    22261 tagggggcgg taaagccggt tgcgggcata tcttcatgtt tttcgccgca ggaagtgcaa
    22321 gtgtgcataa ggtttcagac tttcaacaca agtttgcggt aaagccattc gccggcaaac
    22381 agcatcccca tcaatacata ggcaatcacg cctgtataaa ccgcccacca atcatatcgc
    22441 cccaaccggg ccaacaaagc ggcaagcgtc ccgttggcaa taaagaatac gcaccaaacc
    22501 tgcgttaccc ggcgggtata gcgcacggct ttttcaggca ggtcgggctg ttgcagccgc
    22561 gcaagttttt caatcaccgt ctgcccggca aacaggctgc tgccgaacac cgccaacatc
    22621 atcaaattaa cgaggacagg ataccaatac attgaatcac gccgcccgaa caccaatact
    22681 gcggcaaaaa acagtgtaat atagtggatt aacaaaaatc aggacaaggc ggcgaagccg
    22741 cagacagtac aaatagtacg gcaaggcgag gcaacgccgt accggtttaa atttaatcca
    22801 ctataccaca aagcgggata ggcaatgctt aatacggtca aaaaaatatg tccgaaaaaa
    22861 ccgggtttca ttttgaatcc gcacaaacgt tttcagacgg catccgataa aaacatgccg
    22921 tctgaaaaat aattagaaat acccgattag ccggcctgaa tcttcaatac cgcctgtacc
    22981 acgtcgttga cggtgcggac attgcggaaa tcttcagcct gcagcttgcg ggctgccaca
    23041 accattcacg attgcgatat acccggcggc attcccgact gccgttcagc agaaaacgca
    23101 cccattccaa accgctccaa tatgcctcgg gcagcatacc ggcttcagac ggcatatcgt
    23161 ccgaagcaga caaagtcagg tgtaacgcgt ccctttggtc agaaccatcg ccaaagcata
    23221 agcaaacggc gcgcgcgttg ccgatacggc atatccttcc ggcagcggat cgtccgccgc
    23281 caaaaccaaa accgacccgc atccctcttc caacagggac gccgcttccg ccaatgccgt
    23341 ttccacaccg tcggcacaca cggccaatgc cgtctgctcg ctcatatccc gcctcaatat
    23401 cgaccattgc cccgccgtcg cattgtgcac cgacaaaccg aacgaagtcg gcgacacggt
    23461 atgcgatttc aacagttcca accacaaatc gaaactacgc gccatttccc cgtcgtgcga
    23521 ggcataaact accggactgc cgggatgggc ggaggcaatg tcccaagccg cgtcgcatac
    23581 caaacgcgcc gccttactca aacggcggcg ccgcatagcg ggcaggaacg gcaattcccg
    23641 cctgacatcg ggcaaaccgt cggcaaaatc cggacattcc gcccactgcc tccactgggc
    23701 catatcgcgc attttgctgc ccgaaacccg ccagtcggcg atgtcgaagt ggaaccggca
    23761 aataatcggc ggcatagttt ctttcaaaaa tttacactgt gccgcattct aaccaaagcc
    23821 catccccctg acaatgccga aattcaaacg catccacgcc attttttccg acaacgccgc
    23881 ccctcggcaa accgcccgaa ttagcctgaa tttacattta tcattgataa tgcccgatta
    23941 ccgacaccgc ctccctgctg ccgcacagcg ggcgtatggt tctgatagac cgcattaccc
    24001 gatacggcga tgattttgtc gaagcagggg cgcaggtaaa acccgaccac atcctgctgg
    24061 ccggcggcat actgccctat acggcattta tcgaactgat ggcgcaggct gtcggcgcat
    24121 atgccggcat ccaagcccga aaaaacgcac aaccggtccg gctcggcttc ctgcccggca
    24181 cgcgcaaact tgaaatcttc gcccaatccg tccctgtcgg aacacatttg ccggcaacgg
    24241 cgcatatgtc tatccaagat gccggggtat gggcgtgtcc gactgcgaac tgcgttggac
    24301 ggatgcgccg gaaacttcgt ccggaacact cccttcagac ggcattttgg cgcgcgcctc
    24361 actcaacgtg tacagccccg aacaccctgt cgaaacaact taatgccgtc tgaacagaca
    24421 cgcacatacg gagaacaacc atgactgaaa ccgtcctgat taccggctca aacagaggca
    24481 taggcaaagc cgccgcactc ggttttggcg gacgacggct ttgatatcgc cgtccactgc
    24541 cgcagccgcc gcgacgaagc cgaagccgtg gcggaagaaa tccgcgcttt gggcagaaat
    24601 gcgcgcgtgt tgcagtttga cgtgtccgac cgcgaagcct gccgcgagat tctgaccgcc
    24661 gacatcgaag caaacggcac gtattacggc gtggtgttga acgccggcct gacgcgcgac
    24721 aatgccttcc ccgcgttttc agacgacgat tgggatgtgg tgccgcggac taatttggac
    24781 ggtttttaca atgtactgca tccgctggtt atgccgatga tacgccgccg caaagccgga
    24841 cggattgtgt gtatggcatc ggtgtccggc ctgacgggca accgggggca ggtcaattac
    24901 agcgcgtcaa aagcgggcat tatcggcgcg gcaaaagcct tggcggtcga accggcgaaa
    24961 cgcaaaatca ccgtcaactg cgtggcgccg ggtttgatcg atacggagat tgtcgatgaa
    25021 aacgtacccg tcggagaaat tttgaaagcc gtccccgccg cgcgtatggg actgccggaa
    25081 gaagtggcgc acgcagtgca cttcctgatg gatgaaaaag cggcgtatat cacgcgccag
    25141 gtgattgcgg tgaacggagg tttgtgttga ataccagaag ggtcgcagta acgggcatag
    25201 gcggcattac cgccttcggc cgggattggc aaagcataca ggcagcattc aaagccgaaa
    25261 aaaacgccgt caaatatatg gattggcgcg aacgtttccc cgaattggaa gcgcaactgg
    25321 gtgcgccgat tgaggattac gcgccgccga aacattggac gcgcaagcgg ctcagaagta
    25381 tggggcgcgt gtcgtacctg tgcgtcgatg cggcggagca ggcgctggcg gatgccggtt
    25441 tgctcggaga cgaaagcatt accgacggac ggatgggcgt tgcctgcggc tcttccggcg
    25501 gcggcaccaa agacatcgga gatgtgggcg aattgttgct gaccggcacg tcgcgcaact
    25561 tcggcgccaa tacctatgtg cgtatgatgc cgcacaccgc cgacgccaat atcggcatct
    25621 ttttcggatt aacaaggacg catcatcccg acatcgagcg cgtgttcttc gggcagccaa
    25681 ggcataggtt atgcttacga gaccatcaaa tacggtctga ccgatatgat gctggcgggc
    25741 ggcggcgaag aattttgccc gtccgaagtg tatgttttcg actcgctcta tgccgccagc
    25801 cgccgcaacg gcgaaccgga agagaccccg cgtccatacg acgcgaaccg cgacgggctg
    25861 gtcatcggag aaaaggcgcg gggattttcg tattggaaga attggaacac gccaaacggc
    25921 gcggtgcgaa aatttacgcc gaactcgtcg gctacggcgc caacagcgac ggcatcaata
    25981 tcggcgaagg cgcagccgta ttcatcatga cgcgcgatgc ggatttttcc ggcggtatgc
    26041 agcttctggg ttacggcgca agcagcgatg cctaccatat ttccacgccc cgccccgacg
    26101 caaaggcgca atcctcgcct ttcagacggc attgcagcac gccggccttg cgcccgaaga
    26161 catcggccgg attaatctgc acggcaccgg gacgcaccac aacggcagta tggaaagccg
    26221 cgccgttgca gcggttttcg gcaacaatac gccctgcacg tccgccaagc cgcaaaccgg
    26281 acacacgctg ggcgcggcgg gcgcaatcga agccgcgttc gcgtggggca ttgccgaccg
    26341 gcaaagcaat cccgaaggga aacttccgcc ccggctttgg gacgggcaga acgaccccga
    26401 cctgcccgcc attaacctga ccggcggcgg ctgggaaacc gaaaaacgca ttgccgccag
    26461 ctcgtcgttt gccttcgggg gaagcaactg cgtcttaatc atcggatgaa ataagtttgt
    26521 caatcccacc gctatgctat acaatacgcg cctactcttg acgggtctgt agctcagggg
    26581 ttagagcagg ggactcataa tcccttggtc gtgggttcga accccaccgg acccaccaat
    26641 tcccaagccc ggacgtatgt ttgggctttt ttgccgccct gtgaaaccaa aatgctttga
    26701 gaaaccttga taatgaaaaa agtcagcgta ttgattgttg ccaaaaacga agcaaaccac
    26761 attcgggaat gtattgaaag ttgccgtttc gataaagaag ttatcgttat cgacgaccat
    26821 agcgccgaca acactgccga aattgccgag ggtttgggtg caaaagtctt cagacggcat
    26881 ttgaacgggg atttcggagc gcaaaaaaca tttgccatcg aacaggcagg cggagaatgg
    26941 gttttcctga ttgatgcaga cgaacgctgc acgccggaac tatctgatga aatctcaaaa
    27001 attgtccgaa ccggcgatta tgccgcctat tttgtcgaac gccgcaacct tttccccaac
    27061 catcccgcca cacacggcgc gatgcgtccc gacagcgtat gccgtctgat gccgaaaaaa
    27121 ggcggttcgg tgcaaggcaa agtacacgaa accgtacaga ccccctaccc cgaacgccgt
    27181 ctgaaacatt ttatgtacca ttacacgtac gacaactggg aacaatattt caacaagttc
    27241 aacaaatata cttccatctc ggccgagaaa taccgggagc agggaaagcc cgtgagtttc
    27301 gttagggaca ttatcctccg tccgatttgg ggttttttca aaatttatat cctgaacaaa
    27361 gggtttcttg atggaaaaat gggttggatt atgtccgtca accacagcta ttacacgatg
    27421 attaaatatg tcaaactata ttatctgtac aaatccggcg gaaaatttta aatggaaaaa
    27481 gaattcagga tattaaatat cgtatcggcc aagatttggg gtgggggcga acaatatgtc
    27541 tatgatgttt caaaagcatt gggacttcgg ggctgcacca tgtttaccgc cgtcaataaa
    27601 aatgatgaat tgatgcgcag acgcttttcc gaagtttctt ccgttttcac aacgcgcctt
    27661 cacacgttca acgggctgtt ttcgctctac gcgcttaccc gctttatccg ggaaaaccac
    27721 atttcccacc tgatgataca caccggcaaa attgccgcct tatccgtact tttgaaaaaa
    27781 ctgaccgggg tgcgcctgat atttgtcaaa cataatgtcg tcgccaacaa aaccgatttt
    27841 tatcaccgcc tgatacagaa aaacaccgac cgctttattt gcgtttcccg tctggtttac
    27901 gatgtgcaaa ccgccgacaa tccctttaaa gaaaaatacc ggattgttca taacggtatc
    27961 gataccggcc ggttcccccc gtctcaagaa aaacccgaca gccgtttttt taccgtcgcc
    28021 tacgccggca ggatcagtcc ggaaaaagga ttggaaaacc tgattgaagc ctgtgtgata
    28081 ctgcatcgga aatatcctca aatcaggctc aaattggcag ggcacggaca tccggattat
    28141 atgtgccgcc tgaagcgggg cgtatctgct tcgggagcag aaccatttgt ttcttttgaa
    28201 gggtttaccg aaaaacttgc ttcgttttac cgccaaagcg atgtcgtggt tttgcccagc
    28261 ctcgtcccgg aggcattcgg tttgtcatta tgcgaggcga tgtactgccg aacggcggtg
    28321 atttccaata ctttgggtgc gcaaaaggaa attatcgaac atcatcaatc ggggattctg
    28381 ctggacaggc ttacgcctga atctttggcg gacgaaatcg aacgcctcgt cttaaacccc
    28441 gaagcaaaaa acgcactggc aacggcagga catcaatgcg tcgccgcccg tttcaccatc
    28501 aaccataccg ccgacaaatt attggatgca atataagccg ctttcagacg gcctatgccg
    28561 tctgaaagcc tttgatgcaa caaaccgcca aattatattc gttcattgga aagaaacacc
    28621 ccgaattcat ccttcaaaat aagaaaatcc caatatcccc cgatatcgcg cagcctattg
    28681 gcaaagtttt gcagcgtctt ccccggcttg tgccgccgcg tcaagtgctt tgttacaatg
    28741 cactaccttc acatttctta ataaatttta tgagtaacca tacttcttgg tcgtccaaaa
    28801 tcggtttcgt acttgctgcg gcaggttcgg ccatcggttt gggcgcgatt tggaaatttc
    28861 cttatacggc gggcaccaac ggcggcgcgg tgtttttcct gctgtttttg atatttaccg
    28921 tcttggtcgc cctgcccgtc cagcttgccg aattttatat cgggcgcacg ggcggtaaaa
    28981 atgccgtcga ttccttcagg gttctgcgtc cgggtacgca atggctttgg gtcgggcgca
    29041 tgggcgttgc cgcctgcttt attttgctgt cgttttacag cgtggtcggc ggatgggtat
    29101 tgaattatgt cgtccacagt tttacagggg caatccatgc gggagcggac tttgaagccc
    29161 tgttcggcac aacgatttcc aatccggcag gttcgctgtc ctatcaggca ctgtttatgc
    29221 tgattacggt ttgggtggtc aaaggcggca tttcagacgg cattgaaaag gcaaaccgtt
    29281 atctgatgcc ggggctgttt atcctcttta ttgcgctggc tgtccgttcg ctgacgctgc
    29341 cggatgcaat ggagggcgtg tctttcctgc tcaaacccaa ttggtcgtac tttaaagccg
    29401 atacgatgat tacggctttg ggccaggcgt tttttgccct gagcatcggc gtttccgcca
    29461 tgattaccta tgcttcgtat ttgggaaaag atcaggatat gttccgttcc ggccatacga
    29521 ttatgtggat gaacctcttg gtttccctgc ttgccggcct ggtgattttc ccggcggtat
    29581 tcgccttcgg ttttgaaccg aaccaggggc cgggattgat ttttatcgta ttgcccgcag
    29641 tgttcatgaa aatgccgttc ggtacggttt tatttgcagt attcatgctt ctggtcgttt
    29701 tcgccacgct gacttcggca ttttcgatgt tggaaacggt cattgcctca accatccgcc
    29761 aagacgagcg caaacgcaaa aaacatactt ggcttatcgg cacggctatt ttcattgtcg
    29821 gcatcccgtc cgcgctgtct ttcggcgcat ggggtgagtt taaggttttc ggcaaaacca
    29881 tttttgattt gtgggactat gttatttccg ccgtcattat gccgattggt gctttgagtg
    29941 tttccatctt taccgcctgg attcaggaca agcagtctgt gttaaaagat gccggcgcgg
    30001 gcagcaccgt accacgggca gtgctgctgc tgtggctgaa taccttgcgc taccttgccc
    30061 cgattgccat tattattgtt ttcgtcaatt ttttaggcat cctttaaaca taccgcccga
    30121 cggcaaaatg ccgtctgaaa gcctttcaga cggcattttg cttcagattc aacctatttc
    30181 gttcaaagta tagtggatta aatttaaatc aggacaaggc gacgaagtcg cagacagtac
    30241 agatagtacg gcaaggcgag gcaacgccgt accggttttt gttaatccac tatattgtcc
    30301 ggcatggcca gcctaacttt aagccgcctg ctttcggcaa ccgaccgtat cagcggcaaa
    30361 tccatcacgg aaaacgccgt cgacaaggca tcggcaaccg ccgcatcatc cgccattacg
    30421 ctcatgcttt tataacgcgg cgtactcacg ccggttcgcg gatcgaacaa atgggtaagc
    30481 ctgcccgctt tgtccatcac cgtcccatag ccgcccgaag tggcaaacgc cttgtctttc
    30541 accgtgatat ttgccaacac gccttcttcg tcgtccggat tgcggatgcc gacattccac
    30601 atccgcctgc cgtttgtatc aaaccccctg atttcgccca tatcgaccag cgcggcaggc
    30661 actccgtttg ctttaagcag cgcaacaacc ttgtccgtga tatagccttg cgcgatgccg
    30721 ttcaaggaca aacccatacc cttttcggca aaacggattt cacggtcgtc aaacgagact
    30781 ttgccgaagc cgacccgttt cagggtttcc ttcacgctat tctccggcgg cgtttccgca
    30841 tcgggacggg cggcaaaata atcggcatac agtttccaca acgcctgaac cgtcggatcg
    30901 aacgcgcctt ccgtcagcgc gtgaatatcg cggcacaggc tcaacagttc caaaaaatcc
    30961 gccggaggcg aagtcagata accgtcgcgg ttcagacggc tgatcaggct gtcttcacgg
    31021 taaaggctga acattttttc caaacgcgcc acttccgcca aaaccttatt gaccaaatcc
    31081 gccgcctgtc tgtcgtccac gccgaacagg cgcagctccg cgccggaacc cagcgcgaca
    31141 cctttccaga aaaacacatt ttcatcgcgt tttttatcca tgttgcgttt ttcgccgccg
    31201 gcggcaaaag gattcggcaa aaaagaaacc gccgcaccgg ccacagcaac ggcggcagcc
    31261 gtcagaaaac gtctgcgccc gaaatgcctg cccataccgc ctcctaaacc gacactaccg
    31321 ccttgatgtg cggatgcgga tcgtagcctt ccaactcgaa atcttcaaac ttgaaggcaa
    31381 acaaatcctt gacttcagga ttgattttca tcacaggcaa ggcgcgcggt tcgcgttcca
    31441 actgcaatgc ggcctgttcg aaatggttac ggtacaaatg cgcgtcgcca aacgtatgga
    31501 caaactcgcc cgcctccagc ccgcacactt gcgccatcat catcgtcaac agcgcgtagc
    31561 tggcaatatt aaacggcaca ccaaggaaaa tatctgcact acgctggtaa agctggcagg
    31621 acagtttgcc gtcggcaacg taaaactgaa acagcgcgtg gcagggcggc aaggccatct
    31681 catcgaccaa agccggattc cacgccgaca caatcaggcg gcgcgagtcg gggtttttct
    31741 taatttgttc caccacattg gcgatttggt cgatatgcct gccgtcgggc gcgggccagc
    31801 tgcgccattg gtagccgtaa accgggccca agtcgccgtt ttcgtccgcc cactcgtccc
    31861 aaatggaaac attgttatcc ttcaggtatt tgatattggt atcgcctttg aggaaccaaa
    31921 gcagctcgtg gattatcgag cgcaaatgca gctttttggt cgtcagcagc ggaaaacctt
    31981 tgcccaagtc aaaacgcatc tgataaccga atacggagcg cgtacccgta ccggtgcggt
    32041 ctgatttgtc cgtaccgttg tcgaggacgt ggcgcatcaa gtccaaatag gccttcatca
    32101 tcatctttca tcaaattaaa cggcacatat tgtaacattt ccggccaaca cccgagtccg
    32161 gacaaacgcg caggccgccc cgccggacgc tcaaaacgcg gatgaaggca ggcaggattg
    32221 ttggcaattt cagccctttt tcacagcaaa agcaggcgtg aaaacaaaat tatcttgatt
    32281 ggaatcaaaa aatctagttt aactacttag aataaaattc caataatatt ttttatttga
    32341 gaaattaatt tatgattatt ggttgattat cggcaataaa catcatatat cgaaaatatg
    32401 ggaaaaataa tgtcaacaat ttgtgcaaaa ttaggcttgg catcagaaaa aaataggttt
    32461 atattgccaa ctacaaattt gttttcccat tagtacaata tcaaccaaaa ggagtatccg
    32521 aatgactgac ctgaacaccc tgtttgccaa cctcaaacaa cgcaacccca atcaggagcc
    32581 gttccatcag gcggttgaag aagtcttcat gagccttgat ccgtttttgg caaaaaatcc
    32641 gaaatacacc cagcaaagcc tgctggaacg catcgtcgaa cccgaacgcg tcgtgatgtt
    32701 ccgcgtaacc tggcaggacg acaaaggaca agtccaagtc aaccgcggct accgcgtgca
    32761 aatgagttcc gccatcggcc cttacaaagg cggcctgcgc ttccacccga ccgtcgattt
    32821 gggcgtgttg aaattcctcg cttttgaaca agtgttcaaa aacgccttga ccaccctgcc
    32881 tatgggcggc ggcaaaggcg gttccgactt cgaccccaaa ggcaaatccg atgccgaagt
    32941 aatgcgcttc tgccaagcct ttatgaccga actctaccgc cacatcggcg cggacaccga
    33001 tgttccggcc ggcgacatcg gcgtaggcgg acgcgaaatc ggctacctgt tcggacaata
    33061 caaaaaaatc cgcaatgaat tcacttccgt cctgaccggc aaaggtttgg aatggggtgg
    33121 cagcctcatc cgccccgagg cgaccggcta cggctgcgtc tatttcgccc aagcgatgct
    33181 gcaaacccgc aacgatagtt ttgaaggcaa acgcgttctg atttccggtt ccggcaacgt
    33241 ggcgcaatac gccgctgaaa aagccatcca actgggtgcg aaagtgctga ccgtctccga
    33301 ctccgacggc ttcgtcctct tccccgacat cggtatgacc gaagcgcaac tcgccgcctt
    33361 gatcgaattg aaagaagtcc gccgcgaacg cgttgccacc tacgccaaag agcaaggttt
    33421 gcaatacttt gaaaaccaaa aaccgtgggg cgttgccgcc gaaatcgccc tgccctgcgc
    33481 gacccagaac gaattggacg aagaagccgc caaaaccctg ttggcaaacg gctgctacgt
    33541 cgttgccgaa ggcgcgaata tgccgtcgac tttgggcgcg gtcgagcaat ttatcaaagc
    33601 cggcatcctc tacgctccgg gcaaagcctc caacgccggc ggcgtggcaa cttcgggctt
    33661 ggaaatgagc caaaacgcca tccgcctgtc ttggacgcgc gaagaagtgg acagccgact
    33721 gttcggcatc atgcaaagca tccacgagtc ctgcctgaaa tacggcaaag tcggcgacaa
    33781 agtgaactac gtcaacggtg cgaacatcgc cggcttcgtc aaagttgccg atgcgatgct
    33841 ggcgcaaggc ttctaagcaa acgcctccgc cccgcaaaca aaatgccgtc cgaaccgcaa
    33901 atgctgttca gacggcattt cattatccgc ccgttcgaat cgggtaatac tatagtgaat
    33961 taaatttaaa tcaggacaag gcggcgagcc gcagacagta caaatagtac ggcaaggcga
    34021 ggcaacgccg tactggttta aatttagttc actataccga tacatccgaa tatgccagac
    34081 cgtctgaacg gtattcatac ctcccaatcc tgcacgcgct tcaaatcgtt ttgcgccaaa
    34141 gtatccgcgt ggcggttacg gctctgatat tccctgtctt tcaatatgct gctcgccaca
    34201 taattcaaat gagcctttgc cgcctccgaa gcctcgcccg gccggcggtt cgatatcgcc
    34261 tcatacagca cgcggtgctg cgccatcagt ttcggacgcg gatcttcttc ctgattcaga
    34321 taaataaggc tgctgcgcgt ctgccggtac agcattttca acaaaccgcc cgacaaatgg
    34381 ctgaacaaca aattgtgcgc cgcatccgca atcgtctgat ggaagctgac atcggcttcg
    34441 ccctgatgtt ccagattgcc gcttccgcac gcttcctcaa acttttcaag ccaaaaccga
    34501 atccgcttca aatcggcatc cgtccggcgt tctgccgcca atgccgccat acagccctcg
    34561 atgtggcagc tgaaatcaaa aacatcctgt tcccaattgg aatgtttgcc caaaagctcc
    34621 tgccaacttt gcaaaaaatc ctgctgcggc ttgaccgaaa cataataacc atcgccctgc
    34681 ctcgcttcca aaatctgacg ggcaaccaaa atattcaatg ccgaccggac cgacggacgc
    34741 gaaacgccga actcttccgc caaaacgcgt tcgggcggaa tcttgccccc ttccgcgtaa
    34801 accccttcca cgatgcggcc ttccaatacc gacaatacct gatcgctgat tttctgaggc
    34861 cttaccagtt tcatcactcc tcctttataa agattccctg cagaaccctt ccgaaataca
    34921 tcaaacatca aattggactg gccaatcagg gcggattcta atgacacgcc gttcccgccg
    34981 tcaacggcac ttacctcgca ccgcccccga aacacaggaa aaaactacac caaactacaa
    35041 tttttgttca tgcaaatatt tgttttaacg ggatttaaat gaaagctccg attcaaatct
    35101 gccgaaccgc ccaaaaatat attgacctga atattaaagt ttcgtaaagt aatgcaacgt
    35161 tgctttaatt ggtttgacca ctattgccga cgattagaaa aatattttcg gagatgttca
    35221 attatggaaa cttgggttca aaactacacg gcaatcggcg gcagcctgta tctgactgcc
    35281 gccgccgcac tcttacccat cgtctttttc tttgccgcgc tgaccgtcct gaagctgaaa
    35341 ggctatcagg cggggcttta tacgctgctg attgcgcttg ccgttgccgt attcggcttc
    35401 gggatgccga cgggtatggc ggtttcttcc ctgtcgccgc agccggattg acccaacgcc
    35461 ccatacgcta cactggactt gaccgcgcat tacaaaatcg gcaaatccac ccgcatcggt
    35521 ttggactttg aaaacgtctt taacaaacgc tgccgcacga tgcccgacat tcacgtttac
    35581 ggcacgccgc gcagcctgac cgcaaccgtc aaacatatag tggattaaca aaaatcagga
    35641 caaggcggcg ggccgcagac agtacaaata gtacggaacc ggttcgcccg gtgcttggac
    35701 accttaggga atcgttctct ttgagctaag gcggggcaac gccgtactgg tttttgttaa
    35761 tccactataa agaaagaaat gccgtctgaa accttatcgt ttcagacggc atttgtttgc
    35821 ccgggcggtt atttgccggt ttgggtatcc cgtttcaatc cgccgccgag cgccttgtac
    35881 aaatcggcaa ggttttcggc gcgggtcagt tgtgccgaca aagccgcacc ttccgccgaa
    35941 tagctgctgc gttccgcatc gagcaaatcg agcgcgccgg atacgccgtg tttgtaacgc
    36001 agtccgacca agcgcaacgc ttctttagag gcgcggcttt gtttgcttaa agcgtcatag
    36061 gctttatcca gctgctcgcg cgccgccaat gcgtttgcca cgtcttgaaa ggcggattgg
    36121 acggcggatt cataggcaac aatttgtgcc tgttggcgca gttttgccac atcaaggttc
    36181 gccttgttcg ttccccaagt aaaaatcggc agggtaatag acggcgcgaa cgcccaaacg
    36241 cccgtgccgc ttttgaacag cccgcccaat tcgacagaac ccgtaccgac gcttccggtc
    36301 aggcggatgg acgggaaaaa ggcggcgcgc gccgcaccga tattggcgtt tgcctgtttg
    36361 agcgcgtgtt cggcggcgcg gatgtcggga cggtcgagca atacttcgga actcaaaccg
    36421 gcaggcagtt tttcaacaaa aaactgcttg tccaacggca aaccggcggg caggtcttcg
    36481 ggtatcggac ggttaatcaa ggttcccaag gcattgcgcg cctgttcgcg gctgcgcgcg
    36541 gcatgggcat aatcggcttt ggcagattca atcaaggctt cctgctggcg cagggcgacg
    36601 gcggaaatca cgcctgcctt gtaccgcaat tcggacagct tgtaggtttc ctcgcgcgtt
    36661 ttcaagacac gctgcgccaa agacatcgct tcttcggcat aacgctcgtt gaaataggct
    36721 ttggcaacgg tggcaatcag actcaaatgt gccgcatcgc ggttggcaac gctggcaaaa
    36781 tagccttgca gtgctgcttc gctgctgctg cgcacgcgcc cgaacagatc gagttcgtaa
    36841 gatgccgcac ccagtccgac attgtagctg ctgctgacat tgccgccgct caagctgcct
    36901 tggcgcgagc cgttcgcatt ggcggcaagc gtgggcagga ggttgttgcg ctcgatcatg
    36961 tattgtttgc ggtagatttc gctgttcaat acggctgtac gcaaactggt attgcgctcg
    37021 agtgcgatgt cgatcagctt ttgcaggcgc gggtcggcaa aatagtcatg ccaacccaaa
    37081 tcaaccgcgc ggatggaaga aaccgatgtg tcgttttgga aggtttccgc aacttcgact
    37141 ttgggctgct cgtattgagg aatcatggtg caggcagaca atgcaaaggc tgctgcaaca
    37201 gaggtcaagg tagttttcaa tgtagtattc ataaaaaagt cctgatgccg tctgaaaacc
    37261 ggcggttctc agacggtatt ttgcttaata ttgtttatcg tccgaaccgg ttatacccgc
    37321 ttttgatgca tgtctgaccg ccatttcatg ctcgtgtgca gtttctttga agaatttgcg
    37381 caccaccaca taaaaaagcg gaacaaggaa cacggacaag agcgtgccga tgagcatccc
    37441 ccagaatacg gtcgtgccga tggcgcgctg gctggcagaa ctcgcaccag cggcaatata
    37501 caggggaacc acgcccaaaa taaaggcaaa cgaggtcatg ataatcggac ggaaacgcag
    37561 gcgggctgcc tccaaagcgg cttcgaccgc gcttttccct tgcgcttgaa ggtctttggc
    37621 aaattcgata atcagaatcg cgtttttcgc actcaaaccc atcacagtaa cgaaaccgac
    37681 ttggaagtag atgtcgttgg caaacgaggg aacgctgccc aacagtcctt caaacaggtt
    37741 gcgcccggtt acgcccgcag ccgcaccgat caaacccaac ggaatcacaa ggatgaccgc
    37801 cagcggaatc gaccagcttt cataaagcgc ggcaagtacc aaaaatacgg ctgcaaccgc
    37861 caaaccgtac aaaatcaggg tttgcgagcc gccttttgcc tcttcgcgcg actgtccgcc
    37921 ccattcgaag ctgtaaccgc cgcccaattc gtcaaccatt ttttgaaccg ccgccatagc
    37981 ctgcccggtg gaaacgccgg ttgcaggcga agcggacagc ttcatcgagg gataaccgtt
    38041 gaagcgtacg ctctgttccg taccgttttc ccaagaaaca gtagcaatgg tggaaagcgg
    38101 tacggcgacg ccggatttgt tcggcacggt caggttcaaa atatcggcag gctgcatacg
    38161 ggcatcctcg tcggcctgca ccatcacgcg ttgcagacgg ccttggttcg ggaagtcgct
    38221 gacataagac gaactcagcg cgcttgccaa tgcggtgcgg atgtcggcaa acgaaatgcc
    38281 ttgcgccgcc gctgcggcac ggttgatgtc gattttcaac tgcggcgagt cttccaaacc
    38341 gccggcacgg acggtgctgg ggtcaaacaa accgctggca cgcattttct gaatcagctc
    38401 gttgcgcttc gccagcaatg cggtatggcc ggtattgttg cggtcttgca ggttgatgct
    38461 caggcccgaa ccgttgccca actccagaat cggaggcggg acgacggcga tgccgaaacc
    38521 gtctttaagc gtccccatca tcatacccgt cagcttgccg gcaaccgcaa cggcatcgct
    38581 gccggaggcg gtacgttcgt tccaatcttt caatatggca aaacccatcg ccatattctg
    38641 accgctgccc gaaaagctga agccggaaac ggtaatgatg ttttcaattt cgggaatgct
    38701 tttcgccagt tgggtaactt gtgctagcgt cgcatcggtg cgctctttgg tcgcacccgc
    38761 aggcagttgc acgctgacca taacgaagcc ttggtcttcg gtcggcagga acgaagtcgg
    38821 caggcgcata aacaggaaca cgcccacaac cgccaagccg atatagacaa ccatcatgcg
    38881 gaaagtctta cgcagcactt tggcaacccg gccttcgtag ccgtgcgtcc aactgtcgaa
    38941 tttcttgttg aaccagccga agaaaccttt tttctcttcg tgatgccctt tcgggattgt
    39001 cttcaacatt gtggcacaca aagcaggggt aagggtcagc gcaaggaagg cggagaatgc
    39061 gattgatgac gccatcgtca gggcaaactg tttgtaaata ttgccggccg ccccgctgaa
    39121 catcgccaga ggcacgaaca cggaaatcag aacggcggta ataccgatga ccgcgcccga
    39181 aatctgaccc atcgcttttt tggtcgcttc tttgggcggc aggccttcac ccgccataat
    39241 gcgctcgacg ttttcaacca ccacaatcgc gtcatcgacc acgatgccga tgaccaatgt
    39301 catcgcaaac atcgtcaata cgttaatcga catccccata taagagatga aggcgaaacc
    39361 gcccaacagg gaaatcggta cgacgatggt cggaatcagc gtataacgga tgttttgcag
    39421 gaagaggtac attacgacaa acaccagcac catcgcttcg attaaagtgt gaatcacttt
    39481 ttcaatcgaa atttcaacga atttggaagt atcgtaaggg gttttccaac tcataccctg
    39541 cggaaagtat ttttccagca ccgccaagcg ttcttttacc gcctttgccg tcgccatcgc
    39601 attgccgctg ttggacaaca ttaccgccat accggtggta tttaccccgt tcaggcgggt
    39661 tgaggaagaa tagtcttcca tacccaatcc gactttcgcc acatccttca ggtaaatatt
    39721 agaaccgtcg gtattggcgc ggaggatgac gttgccgaat tcttctgccg tacccaactg
    39781 cccttgcgcc gttacggtag ccgtaaccgt ctgtccgcgc acagcgggaa gcgaaccgat
    39841 ggaacctgcg gaaatttgga tattctgcgc cgacaacgcg ctgccgacat cggcaaacga
    39901 caaattgtag ttttgcagtt tcttaggatc gacccaaatc cgcatcgcgc gttgcgcgcc
    39961 gaacaggcgg acctgcccca cgccttcgat acgctgcaat tcgggaacga cgttgcgctg
    40021 cgcgtagtcg ttcatctctt cggttgactg cacatccgac gaaagcatca caatcatcag
    40081 gaaattggaa cgcgccttgg atacggttac gccgtattgc tggacggttg ccggcagcgt
    40141 gctcaatact tcggaaagct tgttctgcac ttccacctgc gccagattct cgtcggtatc
    40201 gggcgtaaag gtcaggctca cgctgccgct gccgctcgaa tcggcggaag tggacatata
    40261 gtccaaacct tccacgccgt tcatattccg ttcgatcacg gaaagtacgc tgccttccat
    40321 cacttgtgcg gacgcacccg gataaatggc gtgcaaagta atggtcgggg cggcaacgga
    40381 cggatattgc gaaaccggca ggcttttaat gccgaaaata cctgccgcaa taatgaaaat
    40441 cgaaataacc cacgcgaaaa tggggcggtc gataaagaat ttagccatcg atgccttcct
    40501 tatttcgctt cagaagcagg tttggcttca gatgccgtct gaacgccggc ttgaggggcg
    40561 gcagcttggt tttcagacgg cgcccattct ttaggcgtta cctttttcgc ccccgtcata
    40621 ccggcgatac tgatgccttc cacaaccacc ttgtccccgt ccttcagacc cgacgtaaca
    40681 atccaattcg taccctgctg ttgcgcgacc gttacctcgc ggggttccat accgccctgg
    40741 gcattcacaa tcatcacggt atctttcgca ccgcgcgtta ccgcctgctg tggaacgatg
    40801 aatgcattat ccgccgccac ctgatccatc agcacacgca catacaggcc gggcatcagg
    40861 atattctgat cgttcgatac ggcggcgcgc aaggtaatct gaccggtcga ttcgtcaacg
    40921 gtcggatcag caaacagcag gcggcctttt tcaggataaa ccgtaccgtc gtcaaatttg
    40981 atgccgaccg caatcgcacc atccgccgcc agcagcttgc cttcggctat ctgccggcgc
    41041 agtttcatca cttcggatgc agactgggta acgttcacat acatcggatt ggtttggcgg
    41101 atggtggcta aaacagttgt atcgcccgca ttcaacagcg taccttcgga aactttggac
    41161 tgaccgataa agcccgaaat cggcgcggta atgcgcgaac ggttcagatt gatgccggcg
    41221 gatttgatcg ccgcctgcgc cgctttaacg cccgcctcgg cagaacgttt cgccgttacc
    41281 gcagcatcgt actcttgttt actgatggca tcggcggaaa ccagcggttt gtaacgcgcc
    41341 aaatccgcat ccgctttggc aagcgttgcc tgtgccgttg ccagttgcgc gcgcgcgctt
    41401 tccagacctg cttcataagt ggaactgtcg atctgataca gcggctgccc ggcgcggaca
    41461 taactgcctt cttggaacag gcgtttttgg atgatgccgc cgacttgggc gcggacatcg
    41521 gcggtacgca gcgattccaa acgccccggc aactcgacgg tcaatgcgac ggtttgcgga
    41581 tggacggtta cgacgccgac gacgggcgcg ggggcttccc gacccgcagg ctgcccgccc
    41641 tgcgccgcgt ctccgccttt accgcaagac gacagtgcca atgcaacggc ggcagccaac
    41701 gcggccgcac gcatcgcctt agaagcataa aaagccatta tttatcctat ctgtctggtt
    41761 tgatgtaaag ggttttgcca atcaacaggc attcttattt caggatataa aaaccgcctg
    41821 ctttgatacc cgaatgttcg aacgggttgc aaagcaggtt atacctgttt tcaaagttga
    41881 gatgcagtct caattttatg ggtttcatta tacatacacg attgcacgga taaaaagtct
    41941 tttttataat ccgccctcgt caaaccgacc cgaaacgaaa acgccattat gagaaaaacc
    42001 aaaaccgaag ccttgaaaac caaagaacac ctgatgcttg ccgccttgga aaccttttac
    42061 cgcaaaggga ttgcccgcac ctcgctcaac gaaatcgccc aagccgccgg cgtaacgcgc
    42121 ggcgcgctct attggcattt caaaaataag gaagacttgt tcgacgcgct gttccaacgt
    42181 atctgcgacg acatcgaaaa ctgcatcgcg caagatgccg caaatgccga aggagggtct
    42241 tgggcggtat tccgccacac gctgctgcac tttttcgagc ggctgcaaag caacgacatc
    42301 tactacaaat tccacaacat cctgttttta aaatgcgaac acacggagca aaacgccgcc
    42361 gttatcgcca ttgcccgcaa gcatcaggca atctggcgcg agaaaattac cgccgttttg
    42421 accgaagcgg tggaaaatca ggatttggct gacgatttgg acaaggaaac ggcggtcatc
    42481 ttcatcaaat cgacgttgga cgggctgatt tggcgttggt tctcttccgg cgaaagtttc
    42541 gatttgggca aaaccgcccc gcgcatcatc gggataatga tggacaactt ggaaaaccat
    42601 ccctgcctgc gccggaaata atcaagcctt ggtaacaatg ccgtctgaaa caaacaaacc
    42661 ctttcaaacg gcatcaaaat gacacaaagc attcttctaa aaatacatat tcactaaatt
    42721 gcatttttaa tttcccctat catcgcatga acattgtctt ggtcaaaatg tccgttttct
    42781 tctgaataaa cttctaacaa ataatgttca atgaacgttt tatctgtcat caacgataca
    42841 tctttggcaa tgtcttcata cgactcaaaa tcatcttcat gccatggatc atatttatcc
    42901 atgatttttt gaatttcatt tttcatatca tttaccttcc aatatttatt tacaattaat
    42961 aacaatacca ttcgaatgta aactgcattt ttctccggca ttcttgcaaa caaaaaccga
    43021 aaatcccgtc attcccgcgc aggcgggaat tcgttttttt gagttccagt cattcctgat
    43081 aaggctttaa cgtcaagttt tcggattacc gcctttatga ga
//
LOCUS       DAXFZM010000006        41337 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.006, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000006 DAXFZM010000000
VERSION     DAXFZM010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 41337)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 41337)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..41337
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.006"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..302)
                     /locus_tag="ACFJAG_000239"
     CDS             complement(<1..302)
                     /locus_tag="ACFJAG_000239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HFC3979638.1"
                     /translation="MIYKNKIKEDGQDERLKEKAAQYRLFENNDTFQTALKPKFTFID
                     LFAGIGGFRIAMQNLGGEYVFSSEWDEKAKLTYEANFGEVPFGDITLEEIKQYIPK"
     gene            complement(304..717)
                     /locus_tag="ACFJAG_000240"
     CDS             complement(304..717)
                     /locus_tag="ACFJAG_000240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="very short patch repair endonuclease"
                     /protein_id="HFC3979639.1"
                     /translation="MDKLTPEQRKKCMQSNKSTGTKPELVLAKAMWALGLRYRKNSGS
                     IFGKPDFSFKKYKVAVFVDGEFWHGKDWEQKKAVIKGNREFWIAKIERNIQRDIEVTG
                     RLKAEGWTVLRFWSNDVVKNTTCCAEKVKEIIQTR"
     gene            complement(734..1723)
                     /gene="pheS"
                     /locus_tag="ACFJAG_000241"
     CDS             complement(734..1723)
                     /gene="pheS"
                     /locus_tag="ACFJAG_000241"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HFC3979640.1"
                     /translation="MENVNRIVAEGIAAVEAAQDFNALEQIKARYLGKTGELTGLLKT
                     LGQMSPEERKTIGAHINECKNRFQTAFNAKRDALNEAKLQARLAAEALDITLPGRAQE
                     GGSLHPVTLTLQRVVELFHGMGFEVADGPEIEDDFHNFQALNIPANHPARAMQDTFYV
                     ENGDVLRTHTSPIQIRYMLDKKEPPIRIIAPGRVYRVDSDATHSPMFHQAEGLWVEEG
                     VTFADLKAVFTDFIRRFFERDDLQVRFRPSFFPFTEPSAEIDIMGENGKWLEVGGCGM
                     VHPNVLKNVNIDPEKYTGFAFGIGLDRFAMLRYNVNDLRLFFDNDLNFLKQFE"
     gene            complement(1964..2323)
                     /gene="rplT"
                     /locus_tag="ACFJAG_000242"
     CDS             complement(1964..2323)
                     /gene="rplT"
                     /locus_tag="ACFJAG_000242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000124858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HFC3979641.1"
                     /translation="MPRVKRGVTARARHQKIFALAKGYRGRRKNVYRVAKQAVMKAGQ
                     YAYRDRRQRKRQFRQLWIVRINAGARENGLSYSKFMNGLKRASIEIDRKVLADLAVFD
                     KAAFAQLVEKAKAALAA"
     gene            complement(2336..2533)
                     /gene="rpmI"
                     /locus_tag="ACFJAG_000243"
     CDS             complement(2336..2533)
                     /gene="rpmI"
                     /locus_tag="ACFJAG_000243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006708231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HFC3979642.1"
                     /translation="MPKMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQL
                     RGTSMVNDRDLASVAKMLPYA"
     gene            complement(2680..3201)
                     /gene="infC"
                     /locus_tag="ACFJAG_000244"
     CDS             complement(2680..3201)
                     /gene="infC"
                     /locus_tag="ACFJAG_000244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HFC3979643.1"
                     /translation="MIAQEREARINGEITAKEVRLISESGEQLGVVSVREALAMAEGQ
                     DVDLVEISPTAKPPVCKLMDYGKYKYQQAKKRDEAKKNQKQVQIKEIKFRPGTDEGDY
                     QIKMRNINRFLADGDKVKVTLRFRGREMAHQQLGAQLLERVKEDLAEVAQIESFPKME
                     GRQMVMMIAPKKK"
     gene            complement(3219..5132)
                     /gene="thrS"
                     /locus_tag="ACFJAG_000245"
     CDS             complement(3219..5132)
                     /gene="thrS"
                     /locus_tag="ACFJAG_000245"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004829 - threonine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006435 - threonyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HFC3979644.1"
                     /translation="MLNITLPDCSVRQYESPVTVAQIAASIGAGLAKAAVAGKVNGKL
                     VDACDPIVEDSAVQIITPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGF
                     YYDIATEKPFTPEDVAAIEARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLI
                     DDMPEVEAMGMYHHQEYVDMCRGPHVPNTRFLKNFKLTKLAGAYWRGDSNNEMLQRIY
                     GTAWATKDELKDYIQRIEEAEKRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQTI
                     EQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWDNYKDNMFVTSSEKREYAVKPMNCP
                     GHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQI
                     VSEARAFNELLVRIYKQFGFHDVSVRLSLRPEKRAGSDDVWDKAEQGLREALTACGVE
                     WGELPGEGAFYGPKIEYHVKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVM
                     LHRAILGSLERFVGILIENHAGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGF
                     RAELDLRNEKIGYKIRDNSQYRFPYQIVIGDKEKQENKVAVRRKAEDLGSLDLDDFIA
                     QLQQEITDALVNH"
     gene            complement(5185..5261)
                     /locus_tag="ACFJAG_000246"
     tRNA            complement(5185..5261)
                     /locus_tag="ACFJAG_000246"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(5225..5227),aa:Val,seq:gac)
     gene            5440..6555
                     /gene="tgt"
                     /locus_tag="ACFJAG_000247"
     CDS             5440..6555
                     /gene="tgt"
                     /locus_tag="ACFJAG_000247"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008479 - tRNA-guanosine(34) queuine
                     transglycosylase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HFC3979645.1"
                     /translation="MLKFTLHKKDGLARRGTLELNHGKIETPVFMPVGTYGSVKAMNP
                     QNLHDIKAQIILGNTYHLWLRPGLEVVEQFGGLHGFIGWDKPILTDSGGFQVFSLSDM
                     RKLTEEGCTFKSPINGDKLFLSPEISMKIQTVLNSDIAMQLDECTPGETTREQARKSL
                     QMSLRWAERSKKAFEDLKNPNALFGIVQGAMYEDLREESLRGLEEFDFPGLAVGGLSV
                     GEPKPEMYRMLHAVGPMLPEHKPHYLMGVGTPEDLVYGVAHGIDMFDCVMPTRNARNG
                     WLFTRFGDLKIKNAKHKPDKRPIDESCTCYACQNFSRAYLHHLHRAGEILGAQLNTIH
                     NLHFYQVIMAEMRDAVEQGKFADWQAQFHENRARGVD"
     gene            6565..7647
                     /gene="hemH"
                     /locus_tag="ACFJAG_000248"
     CDS             6565..7647
                     /gene="hemH"
                     /locus_tag="ACFJAG_000248"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004325 - ferrochelatase activity
                     [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HFC3979646.1"
                     /translation="MPSEAASDSILPLYPACTIFQKPIMLPFLPEPSLSYTQQNRTAV
                     LLLNLGTPDAPTAQAVRPYLKSFLTDRRIVELPKWLWYPILHGLVLTFRPKKSAHAYE
                     KIWFKEGSPLEVYTARQAAALAERMPDLIVRHAMTYGNPSIADVLAELKSQGVGRLLA
                     IPLYPQYAASSSGAAVDKVCEQLLLQRNQMSVRTISRFYDDAGYIDAMKNHILRYWAE
                     HGRGKKLMLSFHGVPQKHYDLGDPYPDECRHTAKLLAEALELTEDEYTVSFQSQFGRA
                     KWVTPSTQDLFGKLPKQGVTELDVFCPGFLADCLETMEEIALMGREQFYEAGGKNYRY
                     IPCLNDNPDWIDALVALAEENLGGWR"
     gene            7838..8305
                     /locus_tag="ACFJAG_000249"
     CDS             7838..8305
                     /locus_tag="ACFJAG_000249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c2"
                     /protein_id="HFC3979647.1"
                     /translation="MNTTRLPTALVLHFLCAAASAADNSIMTKGQKVYESNCIACHGK
                     KGEGRGTAFPPLFRSDYIMNKPHVLLHSMVKGINGTIKVNGKTYNGFMPATAISDADI
                     AAVATYIMNAFDNGGGSVTEKDVKQAKGKKNQTDKMPSETGNPASDGIQTKPF"
     gene            complement(8302..10023)
                     /locus_tag="ACFJAG_000250"
     CDS             complement(8302..10023)
                     /locus_tag="ACFJAG_000250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium/proton antiporter"
                     /protein_id="HFC3979648.1"
                     /translation="MNSLFLLGGALLFLSVVSTTLSARLGMPLLLVFLAVGMLAGEEG
                     VGGIAFNNVVMANFISQLALAVILLDGGLRTQLSSFRIALKPASVLASWGVFATVLPL
                     GLFATFYLGLDWKFGVLMAAIVGSTDAGAVFSLLRNSGVRLNERVQATLEIESGANDP
                     MAVFLVTALITMIMQPAESGAAAFVRMLALQIGFGLLTGWAGGKILAKLVRRLNLAEG
                     LYALMIVSGGLLVFAFTNTIGGSGFLAVYLAGIIVGNQRNRATEHVLRVMDGLAWLAQ
                     ATLFVMLGLLVSPAGVLDRAAEALAIAAFLMLVARPLAVFGGLWKFNYSLREKAYISW
                     LGLRGAVPISLAMMPLVMGVPNSHLLFDVAFAVVVLSLLIQGTTIPVMARLLKVAMPN
                     KPEPKDTHDIWLAEKEIVRMSAFKVVAESEAEGHHPDMVEPISDSFDARCFALIRNGS
                     RIEMQSDTVLQAEDLAWYILPDGKVDKMAKYFTETGIGVRENFDFFGEFVVSPAARSG
                     DLALAYGLKLEAGEEGLSLAELFDKRSDSQEPVEGDRIDIGGFMLTAKEVDGDGNIGS
                     MGLKVPR"
     gene            10227..10967
                     /locus_tag="ACFJAG_000251"
                     /pseudo
     CDS             10227..10967
                     /locus_tag="ACFJAG_000251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688345.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF808 family protein"
     gene            11036..12574
                     /gene="lnt"
                     /locus_tag="ACFJAG_000252"
     CDS             11036..12574
                     /gene="lnt"
                     /locus_tag="ACFJAG_000252"
                     /EC_number="2.3.1.269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HFC3979649.1"
                     /translation="MFSKLDKYWQHPALYWPLLILFAAATPFAFAPYYHFWLMPLIFG
                     AFVRLIELRPRFAASSAYLFGLTAYTAQFYWIHTALHDVSGLPDLYAVPLTFLLPAYL
                     ALYPALCFWLWKKFTLPQGIKTGLVLPILWTLTEFARERFLTGFGWGAIGYSQITPDS
                     PLAGFAPLGGIHMVTLATAFLGVWLVLAIDNTARSGKRLLPAILIAALLAAGYTAQQT
                     DFTRPDGSRSTVALLQGNIAQTLKWREDQVIPTIQKYYEQVGKTTADIVILPETAIPI
                     MRQNLPENILAQFAEQAQNNGSALAVGISQYTSDGNGYENAVINLTGYQENNQDGIPY
                     YAKNHLVPFGEYKPLPLLTTPLYKMMDMPLSDFRKGGGKQSAMMMKNQKIAFNICYED
                     GFGDELIAAAKDATLLANVSNMAWYGKSNAMYQHLQQSQARAMELGRYMVRATNTGAT
                     AIISPKGNIIAQAQPDTETVLEGHIKGYIGETPYMKTGSSWWLMGILTLAALILFIFR
                     NKEH"
     gene            12838..13701
                     /gene="rpoH"
                     /locus_tag="ACFJAG_000253"
     CDS             12838..13701
                     /gene="rpoH"
                     /locus_tag="ACFJAG_000253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoH"
                     /protein_id="HFC3979650.1"
                     /translation="MNNAFALPAIQSGNGSLEQYIHTVNSIPMLSQEEETRLAERRIK
                     GDLNAAKQLILSHLRVVVSIARGYDGYGLNQADLIQEGNIGLMKAVKRYEPGRGARLF
                     SFAVHWIKAEIHEFILRNWRLVRVATTKPQRKLFFNLRSMRKNLNVLSPKEAQDIADD
                     LGVKLSEVLEMEQRMTGHDIAIMADNSDDEDSFAPIDWLADHDSEPSRQLSKQAHYAL
                     QTEGLQNALAQLDDRSRRIVESRWLQDDGGLTLHQLAAEYGVSAERIRQIEAKAMQKL
                     RGFLTEEAEAV"
     gene            complement(13858..14334)
                     /locus_tag="ACFJAG_000254"
     CDS             complement(13858..14334)
                     /locus_tag="ACFJAG_000254"
                     /inference="COORDINATES: protein motif:HMM:TIGR00645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00645 family protein"
                     /protein_id="HFC3979651.1"
                     /translation="MESRAFVAARKGNVSSKISKTRTGYGFFAKMIFASRWLQVPIYA
                     GLTVVRAICAYKFLKSLKHLVMNLDVSDENAIMLAVLNLIDVVMIANLLTMVQIGGYE
                     SFVSRLRIDDHPDRPEWLSHVNAPVLKVRLSMSIIGIHPSICSKHLSIPPICRKSS"
     gene            14434..15318
                     /locus_tag="ACFJAG_000255"
     CDS             14434..15318
                     /locus_tag="ACFJAG_000255"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YicC/YloC family endoribonuclease"
                     /protein_id="HFC3979652.1"
                     /translation="MSSGNIRIHSMTGFANAAAECGSKRINLDIRAVNHRFLDIQIRM
                     PDDLRHLENGIREQISSHLARGKVECKIQIQDAENGNQSLELNRVLVGQLAEINKNLR
                     KHYDLAKLGVADILRFPGVLASQKENTEALAKTIVELADKALKDFTAARRREGKKLGE
                     HLLQRIKNMEEIIDALSEIFPALVEAHKEKIRTRLAEAVGSIDNDRLQQEFALFIQKS
                     DIDEEFSRLRTHIAEVRRIVTEHKGSSGKRLDFLMQELNREANTLGSKSIATECTQAS
                     VELKVLIEQMREQVQNIE"
     gene            complement(15409..15924)
                     /locus_tag="ACFJAG_000256"
     CDS             complement(15409..15924)
                     /locus_tag="ACFJAG_000256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HFC3979653.1"
                     /translation="MMILKTAPLKRRFAAILYEMLLVGAATCLAALLAGIAAIFLNPV
                     SIAVSALVTSILIMGAWWLYFRANWHGQGQTLAMRTWKIGLCDLNGIQPSLHLLRLRF
                     IWACIFIVFIPMLAYAGLRHFLGIPPKGAAGAALVWLIFPWGFALLNPDRQFLYDFLA
                     GTRLVDVKEQS"
     gene            complement(16000..16419)
                     /locus_tag="ACFJAG_000257"
     CDS             complement(16000..16419)
                     /locus_tag="ACFJAG_000257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979654.1"
                     /translation="MDNKTKLRLGGLILLTTAVLSLIIVLIVDSWPLAILLAAVIAAA
                     AAGGFVWTSRRQQRQFIERLKKFDIDPEKGRINEANLRRMYHSGGQHQKDAITLICLS
                     QKCSVDEAHAMFKKRPTRQEINQMAAKQSRGQKRPHR"
     gene            complement(16540..17538)
                     /gene="holA"
                     /locus_tag="ACFJAG_000258"
     CDS             complement(16540..17538)
                     /gene="holA"
                     /locus_tag="ACFJAG_000258"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HFC3979655.1"
                     /translation="MAAHIGRIDTDAPLKPLYVIHGEEELLRIEAVDALRAAAKKQGY
                     LNREAYTADASFDWNELLQTAGNAGLFADLKLLELHIPNGKPGKNGGEALQDFAARLP
                     EDTVTLVLLPKLEKTRLQSKWFAALAAKGEVWEAKPVGAAALPQWIRGRLDKIGLGIE
                     ADALALFAERVEGNLLAARQEIDKLALLYPKGHAVNIDEAQTAVANVARFDAFQLAGA
                     WMKGDVPRVCRLLDGLEEEGEEPVLLLWAVAEDVRTLIRLAAALKQGQSIQSVRNSLR
                     LWGDKQTLAPLAVKRISVVRLLDALKTCAQIDRIIKGAEDGDAWTVFKQLVVSLAE"
     gene            complement(17540..18016)
                     /gene="lptE"
                     /locus_tag="ACFJAG_000259"
     CDS             complement(17540..18016)
                     /gene="lptE"
                     /locus_tag="ACFJAG_000259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_process: GO:0043165 - Gram-negative-bacterium-type cell
                     outer membrane assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly lipoprotein LptE"
                     /protein_id="HFC3979656.1"
                     /translation="MNKIFLTAAALVLGACGFHLKGADGISPPLTYRSWHIEGGQALQ
                     FPLETALYQASGRVDDAAGAQMTLRIDSVSQNKETYTVTRAAVINEYLLILTVEAQVL
                     KRGEPVGKPMTVSVRRILDYADNEILGKQEEETLWAEMRQDVAEQIVRRLTFLKAE"
     gene            complement(18068..18847)
                     /gene="pgeF"
                     /locus_tag="ACFJAG_000260"
     CDS             complement(18068..18847)
                     /gene="pgeF"
                     /locus_tag="ACFJAG_000260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan editing factor PgeF"
                     /protein_id="HFC3979657.1"
                     /translation="MKTITETLNLAPKGKNFLTADWPAPANVKTLITTRNGGVSQGAY
                     QSLNLGTHVGDDPETVRRNREIVQQQVGLPVAYLNQIHSTIVVNAAEALDGTPDADAS
                     VDDTGKAVCAVMTADCLPVLFCDRAGTAVAAAHAGWSGLAGGVLQNTIAAMKVPPVEI
                     MAYLGPAISADAFEVGQDVFDAFCTSMPEAAAAFEPIGGGKFLADLYALARLILRREG
                     VGGVYGGTHCTVLERDIFFSYRRDGATGRMASLIWLDGNAV"
     gene            18999..19223
                     /locus_tag="ACFJAG_000261"
     CDS             18999..19223
                     /locus_tag="ACFJAG_000261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979658.1"
                     /translation="MMPLYTFSELYMLQQGTAHQAPHCVLPERGCPPIRFYRYKQTGF
                     NRKGMGIKSISDTSRAMPSENQSPLSDGIV"
     gene            19300..20247
                     /locus_tag="ACFJAG_000262"
                     /pseudo
     CDS             19300..20247
                     /locus_tag="ACFJAG_000262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258137.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="bile acid:sodium symporter family protein"
     gene            complement(20400..21524)
                     /gene="rluD"
                     /locus_tag="ACFJAG_000263"
     CDS             complement(20400..21524)
                     /gene="rluD"
                     /locus_tag="ACFJAG_000263"
                     /EC_number="5.4.99.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(1911/1915/1917) synthase
                     RluD"
                     /protein_id="HFC3979659.1"
                     /translation="MQNTSFDNESDYSDDSDFASASGTENRIGLTVPPELAGGRLDAV
                     LAKLLPDYSRSRLTSWIKEGAVIVNDKPSQPKDKMIGGEQICVTVRPSEENLAFVPEP
                     MDLDIVYEDDTVIVVNKPAGLVVHPAAGNWTGTLLNGLLAHCPELSQIPRAGIVHRLD
                     KETSGLMVVAKTLPAQNSLVRQLQERTVKRIYRAVANGIVPFDGKIETQIGRDPHNRL
                     KMAAVKFGGKPAVTHVKVLERYLAHSYIECSLGTGRTHQIRVHMREANHPLAGDPVYG
                     NPRHPCGDTVKEAVKSLGARQALHAYRLSFTHPESGETVSFEAPIPDDIYHLLSVLRL
                     EAGLDSSLSNEEEWQDKFGADDDDDWNEDDYDVEVVYVRE"
     gene            21523..22326
                     /locus_tag="ACFJAG_000264"
     CDS             21523..22326
                     /locus_tag="ACFJAG_000264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HFC3979660.1"
                     /translation="MKKILLTVSLGLALSACATQGTADKDAQITQDWSVEKLYAEAQD
                     ELNSSNYTRAVKLYEILESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIERFRRLH
                     PQHPNMDYALYLRGLVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQRFPNS
                     KYAADATARMVKLVDALGGNEMSVARYYMKRGAYIAAANRAKKIIGSYQNTRYVEESL
                     AILELAYKKLDKPQLAADTRRVLETNFPKSPFLTHAWQPDDMPWWRYWH"
     gene            complement(22396..24615)
                     /locus_tag="ACFJAG_000265"
     CDS             complement(22396..24615)
                     /locus_tag="ACFJAG_000265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0009290 - DNA import into cell involved in
                     transformation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA internalization-related competence protein
                     ComEC/Rec2"
                     /protein_id="HFC3979661.1"
                     /translation="MFRRWFLPCWVVGVAVSFALSVVPHWPFWLAAFAVLAVLARRFA
                     FAGLMLCVLAGAAYGVFRTEAALSSQWRAEAVSGVPLTVEVADMPRSDGRRVQFAAKA
                     VDSGGRTFDLLLSDYKRREWAVGSRWRITARVHPVVGELNLRGLNREAWALSNGIGGV
                     GTVGADRVLLHGGSGWGIAVWRSRISRNWRQADADGGLSDGIGLMRALSVGEQSALRP
                     ELWQAFRPLGLTHLVSISGLHVTMVAVLFAWLAKRLLACSPRLPARPRAWVLAAGCAG
                     ALFYALLAGFSVPTQRSVLMLAAFAWAWRRGRLSAWATWWQALAAVLLFDPLAVLGVG
                     TWLSFGLVAALIWACAGRLYEGKRQTAVRGQWAASVLSLVLLGYLFASLPLVSPLVNA
                     VSIPWFSWVLTPLALLGSVVPFAPLQQAGAFLAEYTLRFLVWLADVSPEFAVAAAPLP
                     LLVLAVCAALLLLLPRGLGLRPWAVLLLAGFVSYRPEAVPENEAAVTVWDAGQGLSVL
                     VRTANRHLLFDTGTVAAAQTGIVPSLNAAGVRRLDKLVLSHHDSDHDGGFQAVGKIPN
                     GGIYAGQPEFYEGARHCAEQRWQWDGVDFEFLRPSERKNIDDNGKSCVLRVVAGGAAL
                     LVTGDLDTKGEAELVKKYGSNLYSQVLVLGHHGSNTSSSGVFLNAVSPEYAVASSGYA
                     NAYKHPTEAVQNRVRAHGIKLLRTDLSGALQFGLGRGGVKAQRLRVYKFYWQKKPFE"
     gene            24647..24922
                     /locus_tag="ACFJAG_000266"
     CDS             24647..24922
                     /locus_tag="ACFJAG_000266"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979662.1"
                     /translation="MIKQSHKTVITRFENDKNANEKPQYYPRQRQTFHRHSRKSGNPK
                     TKSRRNLSERTEPQKPASHLRLNNRTKKAEIKTSGFFFKLAIKHQNE"
     gene            25001..29599
                     /locus_tag="ACFJAG_000267"
     CDS             25001..29599
                     /locus_tag="ACFJAG_000267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S6 family peptidase"
                     /protein_id="HFC3979663.1"
                     /translation="MKAKRFKINAISLSIFLAYALTPYSEAALVRDDVDYQIFRDFAE
                     NKGKFFVGATDLSVKNKRGQNIGNALSNVPMIDFSVADVNKRIATVVDPQYAVSVKHA
                     KAEVHTFYYGQYNGHNDVADKENEYRVVEQNNYEPHKAWGASNLGRLEDYNMARFNKF
                     VTEVAPIAPTDAGGGLDTYKDKNRFSSFVRIGAGRQLVYEKGVYHQEGNEKGYDLRDL
                     SQAYRYAIAGTPYKDINIDQTMNTEGLIGFGNHNKQYSAEELKQALSQDALTNYGVLG
                     DSGSPLFAFDKQKNQWVFLGTYDYWAGYGKKSWQEWNIYKKEFADKIKQHDNAGTVKG
                     NGEHHWKTTGTNSHIGSTAVRLANNEGDANNGQNVTFEDNGTLVLNQNINQGAGGLFF
                     KGDYTVKGANNDITWLGAGIDVADGKKVVWQVKNPNGDRLAKIGKGTLEINGTGVNQG
                     QLKVGDGTVILNQKADADKKVQAFSQVGIVSGRGTLVLNSSNQINPDNLYFGFRGGRL
                     DANGNDLTFEHIRNVDEGARIVNHNTDHASTITLTGKSLITNPNSLSVHSIQNDYDED
                     DYSYYYRPRRPIPQGKDLYYKNYRYYALKSGGSVNAPMPENGVAENNDWVFMGYTQEE
                     AKKNAMNHKNNQRISGFSGFFGEENEKGHNGALNLNFNGKSAQNRFLLTGGANLNGKI
                     SVTQGNVLLSGRPTPHARDFVNKSSARKDAHFSKNNEVVFEDDWINRTFKAAEIAVNQ
                     SASFSSGRNVSDITANITATDNAKVNLGYKNGDEVCVRSDYTGYVTCNTGNLSDKALN
                     SFDATRINGNVNLNQNAALVLGKAALWGKIQGQGNSRVSLNQHSKWHLTGDSQVHNLS
                     LADSHIHLNNASDAQSANKYHTIKINHLSGNGHFHYLTDLAKNLGDKVLVKESASGHY
                     QLHVQNKTGEPNQEGLDLFDASSVQDRSRLFVSLANHYVDLGALRYTIKTENGITRLY
                     NPYAGNRRPVKPAPSPAANTASQAQKATQTDGAQIAKPQNIVVAPPSPQANQAEEALR
                     QQAKAEQVKRQQAAEAEKVARQKDEEAKRKAAEIARQQEEARKAAELAAKQKAEAERK
                     ARELARQKAEEASHQANAKPKRRRRRAILPRPPAPVFSLDDYDAKDNSESSIGNLARV
                     IPRMGRELINDYEEIPLEELEDEAEEERRQATQFQPKSRNRRAISSEPSSDEDASESV
                     STSDKHPQDNTELHEKVETAGLQPRAAQPRTQAAAQADAVSTNTNSALSDAMASTQSI
                     LLDTGASLTRHIAQKSRADAEKNSVWMSNTGYGRDYASAQYRRFSSKRTQTQIGIDRS
                     LSENMQIGGVLTYSDSQHTFDQASGKNTFVQANLYGKYYLNDAWYVAGDIGAGSLRSR
                     LQTQQKANFNRTSIQTGLTLGNTLKINQFEIVPSAGIRYSRLSSADYKLGDDSVKVSS
                     MAVKTLTAGLDFAYRFKVGNLTVKPLLSAAYFANYGKGGVNVGGKSFAYKADNQQQYS
                     AGAALLYRNVTLNVNGSITKGKQLEKQKSGQIKIQIRF"
     gene            complement(29675..30877)
                     /gene="trpB"
                     /locus_tag="ACFJAG_000268"
     CDS             complement(29675..30877)
                     /gene="trpB"
                     /locus_tag="ACFJAG_000268"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HFC3979664.1"
                     /translation="MKNYHAPDEKGFFGEHGGLYVSETLIPALKELEQAYNEAKNDPE
                     FWAEFRRDLKHYVGRPSPVYHAARLSEHLGGAQIWLKREDLNHTGAHKVNNTIGQALL
                     ARRMGKKRVIAETGAGQHGVASATVAARFGMTCDVYMGADDIQRQMPNVFRMKLLGAN
                     VIGVDSGSRTLKDAMNEAMREWVARVDDTFYIIGTAAGPAPYPEMVRDFQCVIGNEAK
                     AQMQEAIGRQPDVAVACVGGGSNAIGLFYPYIEEENVRLVGVEAGGLGVDTPDHAAPI
                     TSGAPIGVLHGFRSYLMQDENGQVLGTHSVSAGLDYPGIGPEHSHLHDIKRVEYTVAK
                     DDEALEAFDLLCRFEGIIPALESSHAVAWAVKNAPKMGKDQVILVNLSGRGDKDINTV
                     AKLKGIEL"
     gene            complement(30960..31589)
                     /locus_tag="ACFJAG_000269"
     CDS             complement(30960..31589)
                     /locus_tag="ACFJAG_000269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HFC3979665.1"
                     /translation="MSENLLEIETHPFDPVLPPKAAVMMMGTFPPKEDKRAMQFHYPN
                     FQNDMWRVYGLVFFNDAAHFRMPSHGEAAHSEKAFDAEKIKAFLHERGIASCPTVLKA
                     AREHGNASDKFLKVVETVDLAAVLAKIPDCRHICTTGGKATEILLDIQGGGIKMPKTG
                     ETVPFPFAGRDLTLTRLPSTSRAYPLSLAKKAAAYRAFFEMAGLCEKQL"
     gene            31865..32644
                     /gene="rsmA"
                     /locus_tag="ACFJAG_000270"
     CDS             31865..32644
                     /gene="rsmA"
                     /locus_tag="ACFJAG_000270"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000179 - rRNA
                     (adenine-N6,N6-)-dimethyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HFC3979666.1"
                     /translation="MKEHKARKRFGQNFLQDTRIIGDIVNAVRPQADDVVIEIGPGLA
                     AITEPLAKKLNRLHVVEIDRDIVCRLKTLPFADKLVIHEGDVLQFDFNGISGKKKIVG
                     NLPYNISTPLLFKLAEVADDVADMHFMLQKEVVERMVAAPKSNDYGRLGVMLQYFFDM
                     ELLIDVPPESFDPAPKIDSAVVRMIPVKHRIGKADDFEHFAKLVKLAFRQRRKTIRNN
                     LKELADDDDLQAVGISPQDRAEHIAPEKYVALSNYLADKAV"
     gene            32659..33228
                     /locus_tag="ACFJAG_000271"
     CDS             32659..33228
                     /locus_tag="ACFJAG_000271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP pyrophosphokinase"
                     /protein_id="HFC3979667.1"
                     /translation="MESNLQKTERLIREINRLHAQYSQDYFETGKVRKINLSHTLKNV
                     PTEHILSYRLNLHEAVNDYLAFADTRGIDFFYRVKTAESIHDKINRYLARGTQYPTNN
                     ILNDIFGARLIWPSETVAGILEKLDGWKTEYGLKNWYLRDAGGYIGIHIYFKNSSNFY
                     YPWELQVWDEKDAKANIENHMAYKRNFVR"
     gene            33339..33794
                     /locus_tag="ACFJAG_000272"
     CDS             33339..33794
                     /locus_tag="ACFJAG_000272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979668.1"
                     /translation="MKYTAALLTFLLTACMNPNDAFFQNRHYQMPEAQLNGSNAVFHY
                     GYSQNPDHDLLVDQVRVPDAYRASFARDWIAKEQGYRKNDCVLEKAESGGVTYYTCDA
                     EKGFNGTRFVIYVVNMKNDKGYVKVYRGMNKPNQEELTKLVADLNKFYP"
     gene            33836..34564
                     /locus_tag="ACFJAG_000273"
     CDS             33836..34564
                     /locus_tag="ACFJAG_000273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HFC3979669.1"
                     /translation="MIKFKNVHKHFKDLHVINGVNLEIKKGEVVVVCGPSGSGKSTLI
                     RTVNQLESIESGEIWVDGVNVADPKTDLNKIREEVGFVFQSFNLYPHLTVLDNITLAP
                     MKVKGQNAEQAEKKAMELLERVGLAHKKDAFPSQLSGGQQQRVAIARGLAMEPRVMLF
                     DEPTSALDPEMVGEVLKVMKDLAESGMTMMCVTHEMGFAREVADRVIFVDKGQILEDE
                     TPEAFFTNPKHERAKQFLQQVMTH"
     gene            34637..34996
                     /locus_tag="ACFJAG_000274"
     CDS             34637..34996
                     /locus_tag="ACFJAG_000274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979670.1"
                     /translation="MYFVDRTAAVLKPTARFLEWLKSTDENMPDLTIEQLRADCSVFL
                     VPQFDEPEAVVSYFDERYRQIFDAELAGWDIDKDKWPQDMGLKAFWEFFDIEIHDMVL
                     DMEEADLNITPVFDNMM"
     gene            35001..35441
                     /locus_tag="ACFJAG_000275"
     CDS             35001..35441
                     /locus_tag="ACFJAG_000275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YgfX"
                     /protein_id="HFC3979671.1"
                     /translation="MRAFQTALRPSRILNILTVSLHSASIAVCLTWFYGRMMWFGLAA
                     LAASYAYSLRITNLKHRHAITAITIDRDGRAEIVSGKDKTAATLAGSSMVTPYALFLQ
                     WDTGGKTVRQCIMPDMTDKESYRRLKVWVLWRQPKKTAETDTSD"
     gene            35472..36746
                     /gene="folC"
                     /locus_tag="ACFJAG_000276"
     CDS             35472..36746
                     /gene="folC"
                     /locus_tag="ACFJAG_000276"
                     /EC_number="6.3.2.12"
                     /EC_number="6.3.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004326 - tetrahydrofolylpolyglutamate
                     synthase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tetrahydrofolate
                     synthase/dihydrofolate synthase"
                     /protein_id="HFC3979672.1"
                     /translation="MKTLQDWLSHLETAHSGGLIDMGLERVSEVKKRMNLTPQCPVVV
                     VAGTNGKGSVCAYLTQIYKQAGFKTGTLTSPHLLHYNERIAINAEPVSDDTIIASFER
                     IEAARGEISLTYFEFNALAAVDIFIREQVDVMILEVGLGGRLDAVNAFDGDCAVVTSV
                     DLDHQAFLGDTVEQVGFEKAGVFRSGKPAICGQNPAPASLVAHAEAIGAKLLMVQRDF
                     EFHAMENIQWNYRFRPQHSDGPARNRNALPFPALRGAYQLSNAACALTVLECLDDRLP
                     VDIGAIKRGLLLVENPGRFQVLPGRPLTVLDVGHNPHAARALRRNLINLAYAQKRTAV
                     FSMLSDKDIDGVSETVKDQFDEWYIAPLDVPRGMTADALKAKLEQHHIENIQTFAAVR
                     DAYRAAASKAGEDDRIVVFGSFHTVADVMSVL"
     gene            36760..37800
                     /gene="ftsN"
                     /locus_tag="ACFJAG_000277"
     CDS             36760..37800
                     /gene="ftsN"
                     /locus_tag="ACFJAG_000277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsN"
                     /protein_id="HFC3979673.1"
                     /translation="MSENKQNEVLTGYEQLKRRNRRRLVTASSLVAASCILLAAALSS
                     DPADSNPAPQAGETGATESQTANTAQTPALKSAAENGETAADKPQDLAGEDKPSAADS
                     EISEPENVGAPLVLINDRLEDSNIKGLEESEKLQQAETAKTEPKQAKQRAAEKVSATA
                     DSTDTVAVEKPKRSAEPKPQKAERTAEAKPKAKETKTAEKVADKPKTAAEKTKPDTAK
                     SDSAVKEAKKADKAEGKKTAEKDRSDGKKHETAQKTDKADKTKTAEKEKSGKAGKKAA
                     IQAGYAEKERALSLQRKMKAAGIDSTITEIMTDNGKVYRVKSSNYKNARDAERDLNKL
                     RVHGIAGQVTNE"
     gene            37793..38290
                     /locus_tag="ACFJAG_000278"
     CDS             37793..38290
                     /locus_tag="ACFJAG_000278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009403 - toxin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HFC3979674.1"
                     /translation="MNSLPIADLLASAVIAACIVISTMRGVIAEAGSMVAWVVSFFFA
                     KLFAAPFADLAFASFQPRLFALALSFISLFVIACLIQKMLRSLLTGAVSAVGLGFANR
                     ILGGVFGALKGVLIVTLLIMLASKTDLPDTEEWQQSYTVPFFVSLSEAVLNHTDNAPE
                     SLDDD"
     gene            38484..40028
                     /gene="purF"
                     /locus_tag="ACFJAG_000279"
     CDS             38484..40028
                     /gene="purF"
                     /locus_tag="ACFJAG_000279"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004044 - amidophosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009113 - purine nucleobase biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HFC3979675.1"
                     /translation="MCGVLGLVSHEPVNQLLYDGLQMLQHRGQDAAGIATAEGGTFHM
                     HKGKGMVSEVFRTRNMRDLTGNAGIAHVRYPTAGNAGSSAEAQPFYVSSPFGIVLAHN
                     GNLTNTAELYENVCNKHLRHINTGSDSEVLLNVFAHELRREVSKNADPHRLNADNIFN
                     AVAEVHRLVRGAYGVVAMIAGYGMLAFRDPYGIRPLALGSQTDSEGRKSYAVASESVA
                     FNALAYDLERDIRPGEAVFVGFNGTIIARQCSDRAKLSPCLFEYVYFARPDSVIDGVS
                     VYQSRLDMGVSLAEKIKRELPVDGIDVVMPIPDTSRPSAMELAVHLKKPYREGLIKNR
                     YIGRTFIMPGQSTRKKSVRQKLSPMETEFAGKSVLLVDDSIVRGTTSREIVEMVRAAG
                     ARKVYIASAAPEVRYPNVYGIDMPTREELIANGRSAAEIAAEIGADGIVFQDLGDLEA
                     VVKALNPKIESFDSSCFNGIYRTGDIDDAYLDRLSAEKSGCAGLKIHPSRMEHSISIS
                     DAGDEE"
     gene            40128..40619
                     /gene="greB"
                     /locus_tag="ACFJAG_000280"
     CDS             40128..40619
                     /gene="greB"
                     /locus_tag="ACFJAG_000280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreB"
                     /protein_id="HFC3979676.1"
                     /translation="MSTETKNYITPAGWQALKDELYQLVNKERPEIVQIVNWAAGNGD
                     RSENGDYLYGKRRMREIDRRIRFLTKRLEAAVVVDPELREATDQVFFGATVGLLRGDG
                     REQTVKIVGVDEIDTAQNKISWISPLARCLIKAREGDEVVLNTPEGREEIEILSVEYI
                     KID"
     gene            40678..41304
                     /locus_tag="ACFJAG_000281"
     CDS             40678..41304
                     /locus_tag="ACFJAG_000281"
                     /EC_number="5.3.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004640 - phosphoribosylanthranilate
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HFC3979677.1"
                     /translation="MRKIRTKICGITTPEDALYAAHAGADALGLVFYPQSPRAIDIIK
                     AQKIAAALPPFVSVVALFVNESAQNIRRILAEVPIHIIQFHGDEDDAFCRQFDRPYIK
                     AIRVQTASDIRNAATRFPNAQALLFDAYHPSEYGGTGHRFDWTLLAEYSGKPWVLAGG
                     LTPENVGEAVRITGAEAVDVSGGVEASKGKKDPAKVAAFIATANRLSR"
BASE COUNT        10662 a        11703 c        10028 g         8944 t
ORIGIN      
        1 tgcttcggaa tgtattgttt gatttcttcc aaagtaatat cgccaaacgg cacttctccg
       61 aaattggctt cgtacgtcag tttggctttt tcgtcccact cgctcgaaaa cacgtattcc
      121 ccgcccaagt tctgcatcgc gatgcggaag cccccgatac ctgcgaacaa gtcgataaag
      181 gtaaatttgg gtttcaaggc cgtctgaaaa gtatcgttgt tttcaaaaag gcggtattgt
      241 gctgcttttt cttttaaccg ttcatcctgc ccatcttcct taatcttgtt tttgtaaatc
      301 aattcatctt gtttggatga tttctttgac tttttcggca cagcaggttg tatttttgac
      361 gacatcgtta ctccaaaaac gtaaaaccgt ccagccctcg gctttcagac ggcctgttac
      421 ttctatatcc ctttggatat tgcgctcaat tttggcaatc caaaactcac gatttccctt
      481 tattaccgct tttttctgtt cccaatcctt accgtgccag aattccccat cgacaaatac
      541 ggcaacttta tattttttaa atgaaaaatc aggttttcca aaaatgcttc cgctattttt
      601 ccgatacctg agccccaaag cccacattgc cttcgccaac acaagctcgg gtttcgtccc
      661 tgtacttttg ttggactgca tacatttttt gcgctgctcc ggggttaatt tatccattgg
      721 gtttatttga gatttattca aactgcttca agaagttcaa atcgttatcg aagaacaagc
      781 gcaggtcatt gacgttgtag cgcaacatgg caaagcggtc gagaccaata ccgaaagcga
      841 aaccggtata tttttcaggg tcgatattga catttttcaa cacattagga tgtaccatac
      901 cgcaaccgcc tacttccaac catttgccgt tttctcccat gatgtcgatt tcggcagaag
      961 gctcggtaaa cggaaagaaa gacggacgga aacgcacttg taggtcatcg cgttcaaaga
     1021 agcgacggat aaagtcagtg aacactgctt ttaagtcggc aaaagttacg ccctcttcta
     1081 cccacaaacc ctcggcctga tggaacatag gcgagtgcgt ggcatcgctg tccacacggt
     1141 aaacgcggcc gggggcgata atgcggatgg gcggctcttt tttatcgagc atatagcgga
     1201 tttgaatcgg ggaagtgtgc gtacgcaaaa catcgccgtt ttcaacgtaa aacgtatcct
     1261 gcatcgcacg ggcaggatgg tttgcaggga tgttcagggc ttggaaattg tgaaaatcgt
     1321 cttcgatttc aggcccgtcc gccacttcga aacccattcc gtgaaagagt tcgaccacac
     1381 gttgcaaggt cagggttacg ggatgcaggc tgccgccttc ctgagcgcgt ccgggcaggg
     1441 taatgtcgag ggcttcggcg gcaagtcggg cttgcagctt ggcttcgttg agggcatcgc
     1501 gtttggcatt aaaagccgtc tgaaaccggt ttttgcattc attgatatgc gcacctatgg
     1561 ttttgcgctc ttcaggcgac atttgcccca aagttttcag aagtccggtc aactcgccgg
     1621 ttttgccaag ataacgggct ttgatttgtt ctagagcgtt gaagtcttgc gcagcttcta
     1681 ctgcggcaat gccttctgca acgatacggt ttacattttc cataatatca agcctgtcaa
     1741 ttaatgatat gccacctgaa acaacgaggc cgcctgtata gcctgacata tcagactctt
     1801 cagacgacct tattttcttc acggccaatc cattggataa attttctgta ttttaacgca
     1861 aatttattta aaaaaataga ctttaaagaa agaaaatcaa tcacatagaa tttccgcaaa
     1921 caaagaaaaa aggaagccgc agcttccttt tcaatttttt ggattaagca gccaaagcag
     1981 ctttggcttt ttcaaccaat tgtgcaaaag cggctttatc gaacacggcc aaatcagcca
     2041 atactttgcg gtcgatttcg atagaggcgc gtttcagacc gttcataaat ttgctgtaag
     2101 acaacccgtt ttcacgcgca cctgcattga tacgaacaat ccacaattga cggaattggc
     2161 gtttgcgttg gcggcggtca cggtatgcgt actgaccagc tttcattacc gcctgcttgg
     2221 caacgcggta aacgttttta cgacgaccac gatagccttt ggctaacgcg aagatttttt
     2281 ggtgacgggc acgggcggta acaccgcgtt ttacgcgtgg catattctaa actccttaag
     2341 cgtagggtaa cattttagca acagaagcca aatcgcgatc atttaccata gaggtaccgc
     2401 gcagttggcg tttgtttttg gtggtctttt tagtcaagat gtggcgtttg aacgcatgag
     2461 cgcgtttcac accgccgtta cccagtactt taaagcgttt tttcgcgcta gacttggttt
     2521 tcattttagg catgggaaaa ctccattcgt tatcggataa ggcattaggg ggttttaaaa
     2581 catcggtttc aaacacttga acccacaatg ccacggtttt ttgccgcaat tgaaaactta
     2641 ctccgaagcg gcaatcggag taagcggaaa attatagctt tattttttct tcggcgcaat
     2701 catcatcacc atttgacggc cttccatttt gggaaaggac tcgatttgcg ccacttcagc
     2761 caaatcttct tttacacgtt ccaaaagttg cgcgccgagt tgctggtgag ccatttcacg
     2821 gccgcggaaa cgcaatgtca ctttgacttt atcgccgtcg gcaaggaagc ggttgatgtt
     2881 gcgcatcttg atttgataat cgccctcatc tgtacccgga cggaatttaa tttccttaat
     2941 ttgcacctgc ttttggtttt tcttggcttc gtcgcgcttc ttggcttgtt ggtatttgta
     3001 tttaccgtaa tccatcagtt tgcacacagg aggtttagca gttggggaaa tctctaccaa
     3061 atcgacatcc tgcccttcgg ccatagccaa agcttcacga actgaaacga caccaagctg
     3121 ttcgcctgac tcactgatta aacgcacttc tttggcggta atttcaccgt tgattcgtgc
     3181 ttcgcgttct tgagcgatga tgaatactcc tataaaaatt aatgattgac gagggcatca
     3241 gtgatttctt gctgcaattg cgcaatgaaa tcatccaaat ccaaagaacc caagtcttcc
     3301 gctttgcggc gtaccgcaac tttgttttct tgtttctctt tatcgccgat aacgatttga
     3361 taagggaaac ggtattggct gttgtcgcgg attttgtaac cgattttttc attacgcaaa
     3421 tccaactcgg cgcggaagcc tgccgcctgc aatttggcag caacttcccg acaataatct
     3481 gcctgatttt cggtgatgtt cataatcacc atttgaaccg gtgcaagcca taacgggaaa
     3541 gagcctgcat ggttctcaat cagaatgccg acaaaccgct ccaaagaacc taaaatggcg
     3601 cgatgcaaca taacaggccg cgctcggtcg ttgttttctg ttacatattc tgcatccaag
     3661 cgttccggca agacgaaatc cagttgtaat gtaccgcatt gccaagaacg acccaaggca
     3721 tctttgacgt gatattcgat tttaggcccg taaaacgcac cctcgcccgg caattcgccc
     3781 cattccacgc cgcaggcagt caatgcctcg cgcaaaccct gctctgcctt atcccacacg
     3841 tcgtctgaac ctgcgcgttt ttcagggcga agggaaagcc tgacggatac atcatggaaa
     3901 ccgaactgtt tgtagatgcg aaccaacaat tcattgaacg cacgagcctc gctgacgatt
     3961 tgatcttcgg tacaaaaaat atgcgcatca tcctgcacaa aaccgcgaac cctcatcaga
     4021 ccgtgcagtg cgccgctcgg ctcgttgcgg tggcaagaac cgaattccgc caaacgcatc
     4081 ggcaaatctc gatatgaacg caaaccgttg ttgaaaattt gaacatgacc cggacagttc
     4141 atcggtttaa ccgcatattc gcgtttttcc gaactggtta cgaacatatt gtctttgtag
     4201 ttgtcccagt ggccggattt ttcccaaaag gttttatcca taatttgagg cgttttgacc
     4261 tctttataac cggcggcgtt cagctcttta cgcatatgct gctcgatagt ctgccacaaa
     4321 gcccaacctt tgggatgcca aaacaccata cccggcgctt cgtcctgcaa gtggaacaaa
     4381 tccagttgct tgcccaattt gcggtggtca cgtttttctg cttcttcaat gcgttggata
     4441 tagtctttta attcgtcttt cgtcgcccaa gcagtgccat aaatacgttg cagcatttca
     4501 ttattgctgt cgccgcgcca atatgcgcct gccagcttgg tcagtttgaa gtttttcagg
     4561 aaacgggtat tcggaacgtg cgggccgcgg cacatatcga catattcctg gtgatgatac
     4621 atacccattg cttccacttc gggcatatcg tcaatcaggc gcagcttgta ttcttcgccg
     4681 cgctcttgaa aaattttaat cgcctccgca cgcggagtca tgattttgac cacatcataa
     4741 tcttgggcaa tcaattcttt catacgcgct tcaatggcgg caacatcttc cggtgtaaac
     4801 ggtttttccg tggcgatgtc gtaataaaag ccctcttcaa tgacggggcc gataaccatt
     4861 tttgcattag gatagagttg cttgacggca tgcccgacaa gatgtgcgca ggaatggcgg
     4921 atgatttcga tgccttcctg atctttcgga gtaatgattt gaacagcaga atcctcaaca
     4981 atcgggtcgc acgcatcgac caatttgccg tttaccttgc ctgccaccgc cgccttcgcc
     5041 aaaccggcac cgatagacgc agcaatttga gccacggtaa cgggggattc gtattggcgg
     5101 actgaacagt ccggcaaggt aatattcaac atcaaacgct ccgaaagatt aaaaaataac
     5161 ggcataaatg ccgttatggg aatttggtag gcacgattgg attcgaacca acgaccccca
     5221 ccatgtcaag gtggtgctct aaccaactga gctacgtgcc ttcaaagaat ttttgtattt
     5281 tatcgggtcg ttttaatttt tgcaagagag atgtgcattt ctttatgcaa cattgtggca
     5341 agatttgggg ataccgtctg aaaaaccgtg ggaattcatt tataatgccg tcttttaaaa
     5401 tatatttcga cccctgtcgc ccaacttaca ttcaatctta tgcttaaatt tactttacac
     5461 aaaaaagacg gtctcgcccg acgcggcacg ctggagttga accacggaaa aatcgaaacg
     5521 ccggttttca tgccggtcgg tacttacggt tcggtcaaag cgatgaaccc gcaaaacctg
     5581 cacgacatca aggcgcaaat tattttgggc aacacttatc atttgtggct gcgtccgggt
     5641 ttggaggtcg tcgaacagtt tggagggctt cacggtttta tcggctggga caaaccgatt
     5701 ctgaccgact cgggcggttt tcaggttttt tctttgtcgg atatgcgcaa gctgaccgaa
     5761 gaaggctgta cgtttaaaag cccgattaac ggcgacaagc tgtttttatc acctgaaatt
     5821 tccatgaaaa tccaaacggt tttgaactcg gatatcgcga tgcagttgga cgaatgcacg
     5881 ccgggcgaaa caacgcgcga acaggcgcga aaatccctgc aaatgagctt gcgctgggcg
     5941 gaacggagca aaaaagcctt tgaagatttg aaaaacccga acgcgctgtt cggcatcgtg
     6001 caaggcgcga tgtatgagga tttgcgcgaa gaatctttgc gcggtttgga ggaatttgat
     6061 tttcccggcc ttgccgtcgg cggtttgtcc gtcggcgaac ccaagcccga aatgtaccgt
     6121 atgctgcacg ccgtcggccc gatgctgccc gaacacaaac cgcattacct gatgggcgta
     6181 ggcacgccgg aagacctcgt gtacggcgtg gcgcacggca tcgatatgtt cgactgcgtg
     6241 atgcccaccc gcaatgcacg caacggctgg ctgtttaccc gtttcggcga tttgaaaatc
     6301 aaaaacgcca aacacaagcc cgacaagcgt ccgatagacg aaagctgcac ctgctacgcc
     6361 tgccaaaatt tcagccgcgc ctacctgcac catctgcacc gcgccggcga aatcttgggc
     6421 gcgcaattga acaccatcca caacctgcat ttctaccaag tcatcatggc ggaaatgcgc
     6481 gatgccgtcg aacaaggcaa atttgccgac tggcaggcgc aattccacga aaaccgcgcg
     6541 cgcggcgtgg actgattccc ggcaatgccg tctgaagccg cttcagacag cattttgccg
     6601 ctttaccctg cctgcactat ttttcagaaa ccgatcatgc ttccattcct tccagaaccc
     6661 tccctttcct atacgcaaca aaaccgtacc gccgttttgc tgttgaacct cggcacaccc
     6721 gacgcaccga ccgcacaggc ggtacgccct tatctgaaat cctttctgac cgaccggcgc
     6781 atcgtcgaac tgcccaaatg gctgtggtat cccattctgc atggcctggt actgacgttc
     6841 cgccccaaaa aaagcgcgca cgcctatgaa aaaatctggt ttaaggaagg ttcgccccta
     6901 gaagtttaca cagcacgcca agctgccgcg cttgccgaac gtatgcccga cctcatcgtc
     6961 cgccacgcca tgacttacgg caatccttcg atagcggatg tattggcgga gctgaaatcc
     7021 caaggtgtag gcagattgct tgcgattccc ctgtatccgc aatatgccgc ttccagcagc
     7081 ggagcggcgg tagataaagt gtgcgaacaa ctgctgctgc aacgcaacca aatgagcgtc
     7141 cgcaccattt cgcgctttta tgatgatgcc ggctacattg atgcgatgaa aaaccacatc
     7201 ctccgatatt gggcggaaca cgggcgtggg aaaaaactga tgttgagttt tcacggcgta
     7261 ccgcagaagc actacgacct cggcgacccc tatcccgacg agtgccgcca caccgccaaa
     7321 ctgcttgccg aagcactgga actgaccgaa gacgaatata ccgtatcgtt ccaaagccaa
     7381 ttcggcaggg caaaatgggt tacaccgagc acgcaggatt tgttcggcaa actgcccaaa
     7441 cagggggtaa ccgagctgga cgtattctgc ccgggctttt tggcagactg cttggaaacc
     7501 atggaagaaa tcgccctgat ggggcgggaa cagttttatg aagcgggcgg aaaaaactac
     7561 cgctacatcc cctgcctcaa cgacaacccc gactggatag acgcactcgt cgcacttgcc
     7621 gaagaaaacc ttggcggctg gcgttgaaac tgtttgagcc atgtctaaaa tgccgtctga
     7681 acgccgtgtt cagacggcat tttcccgcta ctttagcgta tgatggcatc tatgccggac
     7741 agcacatcaa gtgcaacctt actaccgatt cggcaaaaaa acctttcacc cgctacgcaa
     7801 aatcaacaac aaggtttcaa acattaagga aacgccaatg aacacaaccc gactgccgac
     7861 cgccctcgtc ttgcacttcc tctgcgccgc cgcttctgcc gccgacaaca gcatcatgac
     7921 aaaagggcaa aaagtgtacg aatccaactg catcgcctgc cacggcaaga aaggggaagg
     7981 gcgcggcact gcgtttcctc cgcttttccg gtcggactat attatgaaca aaccgcacgt
     8041 cctgctgcac agcatggtca aaggcatcaa cggtacaatc aaagtcaacg gcaaaaccta
     8101 caacggattc atgcccgcaa ccgccatcag cgatgcggac attgccgccg tcgccactta
     8161 tatcatgaac gcctttgaca acggcggcgg aagcgttacc gaaaaagacg taaaacaggc
     8221 aaaaggcaaa aaaaaccaaa cagacaaaat gccgtccgaa accggcaatc cggcttcaga
     8281 cggcattcaa accaaacctt tctaacgcgg tactttcaga cccatagacc cgatattgcc
     8341 gtccccgtca acctccttcg cggtcagcat aaagccgccg atgtcaatac ggtcgccctc
     8401 gaccggctcc tgactgtcgg aacgcttatc gaaaagctcg gcaaggctca aaccctcttc
     8461 gcccgcttcc agcttcaaac cgtaagcaag tgccaaatcg cccgaacgtg ctgccggcga
     8521 aacgacaaac tcaccgaaga aatcaaaatt ttcacggacg ccgatacccg tctcggtaaa
     8581 gtatttcgcc attttatcga ccttgccgtc gggcaggatg taccacgcca aatcctccgc
     8641 ctgaagcacg gtgtcggact gcatttcgat tcggctgccg ttgcgtatca atgcgaaaca
     8701 gcgtgcgtca aacgaatcgg aaatcggttc gaccatatcg ggatggtgtc cctccgcttc
     8761 agattcggca accactttaa acgccgacat tctgacaatt tccttttccg ccagccaaat
     8821 atcatgcgta tctttcggtt cgggcttgtt gggcatggca accttcaaca gccgcgccat
     8881 cacaggaatc gtcgttccct gaatcagcag cgacagcacc accacggcaa acgccacatc
     8941 aaacagcagg tgcgaattgg gaacgcccat caccagcggc atcatcgcca gcgaaatcgg
     9001 tacggctcct cgcaagccca accaactgat atacgccttt tcacgcaggc tgtaattgaa
     9061 tttccacaaa ccgccgaaca ctgccagcgg acgcgcgacc agcatcagga acgccgcaat
     9121 cgccaaggct tccgccgccc tgtccaacac gccggcggga gaaaccagca gaccgagcat
     9181 gacgaacaaa gttgcctgcg ccagccaagc caaaccgtcc atcacacgca aaacgtgttc
     9241 cgtcgcacgg ttgcgctggt taccgacaat gatgccggca aggtaaaccg ccaaaaagcc
     9301 gctgccgcct atggtattgg taaacgcaaa cacaagcagc ccgcccgaca caatcatcag
     9361 cgcgtacaga ccttccgcaa gattcagacg gcgtaccagc tttgccaata tctttccgcc
     9421 cgcccaaccc gtcagcagac cgaaaccgat ttgcagcgca agcatccgga caaacgctgc
     9481 cgcacccgat tccgccggct gcataatcat ggtaatcagt gccgtaacca aaaaaaccgc
     9541 catcgggtcg ttcgcacccg attcgatttc caaagtcgcc tgcacccgtt cgttcaaacg
     9601 cacgccgctg ttgcgcaaaa ggctgaatac cgcgccggca tcggtcgaac cgacaatcgc
     9661 cgccatcagc acgccgaact tccaatccaa accgagataa aaagttgcaa acagtcccag
     9721 cggaagcaca gtggcaaaca cgccccacga agcgagtacc gacgcgggct tcaacgcaat
     9781 ccgaaaactg gaaagctgcg tccgcaaacc gccgtcgagc agaataaccg ccaaagcaag
     9841 ctggctgatg aaattcgcca tcacgacatt attgaaggca atgccgccaa cgccttcctc
     9901 gcccgccagc atgccgacgg caagaaacac cagcagcaaa ggcattccca aacgtgcgga
     9961 caaagtggtc gaaaccacgc tcaggaacaa cagtgcgcca cccagcagaa acaggctgtt
    10021 catccaatcc acgccaacgg ctccccctta aaattcatga aattagaatc gaaagattgt
    10081 aacacggcat tttcttctca cgaaacttta tttcatgtcc gccaccgcct tcagacggca
    10141 ttttcctgtt tcatgccgcc tgataccgcc caaacccgcg ttctcctata taatgtcgga
    10201 ctttgcgccg catttcagga ttttttatgg catttgcctc actatttact ctgccggact
    10261 acatcaccgc cgttttggac gatgttgccc tgatgaccaa agccgccgca aagaaaaccg
    10321 ccggcgtggc cggcgacgat ttggcaccca atgccaaccg ggttacaggc gtatcggcag
    10381 aacgcgagtt gccgattgtt tggccggtgg cgaaaggttc ttttgccaac aagccggttt
    10441 tggtgtctgc ggctctgctg ctttccgcct tcctgccgca actcattacg ccgcttttga
    10501 cggcaggcgg gatttatttg tgctttgagg gcgtggaaaa gctgctgcac aagtttctgc
    10561 accgacatga cgcgcacgat gacggcggcg aaacggcggt taacgagcag gctaaaatca
    10621 aaggtgcaat ccgtaccgac tttatcctgt ccgcagaaat catcatcatc gcgctgtgcg
    10681 tggtcgaaca atacagcctg atgacgcgct cgctcgtgat ggcggcaatc ggcatcggca
    10741 tgactgtttt ggtgtacgga atcgtcgccg tcatcgtcaa actcgacgac ttgggcatgc
    10801 tgctgatgcg ccgcccacaa cctcggcctt ttgcacgatt tcctgcacgc gcaacactgg
    10861 aacgctggct ggacagagta ttccgccaac ctcgttgtcg ggccgctttc cggttcgatt
    10921 gcctgcgccc cgccttgtcg ctgatgaatc gtttcggcag gcattgattc ctttttcaaa
    10981 taccgatgcc gtctgaaaga cgttcagacg gcatattccg aacagacaga cgaatatgtt
    11041 ttccaaactg gacaaatact ggcagcaccc cgccctctac tggcctttgc tcatcctttt
    11101 tgccgccgcc acccccttcg ccttcgcacc ctactaccac ttttggctga tgcccttgat
    11161 tttcggcgcc ttcgtccgcc tcatcgaact gcgtccgcgt tttgccgcct cttccgccta
    11221 cctgttcggt ctgaccgcat acacggcaca gttctactgg atacacactg ccctgcacga
    11281 cgtttccggc ctgcccgacc tctatgccgt accgctgacc ttcctgctgc ccgcctacct
    11341 tgccctttat ccggcactgt gtttctggct gtggaaaaaa tttaccctgc cccagggcat
    11401 aaagaccggt ctggtactgc ccatcctgtg gacgctgacc gagtttgccc gcgagcgttt
    11461 cctgaccgga ttcggctggg gcgcaatcgg ctactcccaa atcaccccgg acagcccgct
    11521 ggcgggtttc gcccccttgg gcggcatcca catggttaca ctggcaaccg cctttctcgg
    11581 tgtctggctg gttttggcga tcgacaacac cgcacgttcg ggcaaacgcc tgcttccggc
    11641 cattctgatt gccgccctgc ttgccgcagg ctacaccgcc caacaaaccg acttcacccg
    11701 ccccgacggc agccgcagca ccgtcgccct gcttcagggc aacatcgccc aaaccctcaa
    11761 atggcgtgaa gaccaagtca tcccgaccat acagaaatat tacgaacagg tcggcaaaac
    11821 cactgccgac atcgtcatcc tgcccgaaac cgccattccc atcatgcgcc aaaacctgcc
    11881 ggaaaacata ctggcgcaat tcgccgaaca ggcgcaaaac aacggcagcg cgctcgccgt
    11941 cggcatcagc caatacactt cggacggcaa cggttacgaa aacgccgtca tcaacctgac
    12001 cggctatcag gaaaacaatc aggacggcat cccttactac gccaaaaacc acctcgtccc
    12061 cttcggcgaa tacaaaccgc tgcccctcct gaccacaccg ctttacaaaa tgatggacat
    12121 gcccctttcc gacttccgca aaggcggcgg caagcaatcc gccatgatga tgaaaaacca
    12181 aaaaatcgcc ttcaacatct gctacgaaga cggattcggc gacgaactga ttgccgccgc
    12241 caaagacgcc acactgcttg ccaatgtcag caatatggcg tggtatggaa aatccaacgc
    12301 catgtaccag cacctccaac aatcgcaggc gcgggctatg gaactcggac gctatatggt
    12361 ccgcgccacc aacaccggcg caaccgccat catctccccc aaaggcaaca tcatcgccca
    12421 agcccaaccc gatacggaaa ccgtattaga aggacacatc aaaggctaca tcggcgaaac
    12481 gccctatatg aaaaccggca gttcatggtg gttgatgggc atattgaccc tagccgcact
    12541 gattcttttc atcttccgaa acaaagaaca ctgatacctg cacagtccgt ccggacgggc
    12601 tgtctttttt caaaccggcc gtttacatac aaccacgtat gtaatataat tctaaaatcg
    12661 aattgagcta tcaggtttac aaaatcaatc aaacttgcct tacaaaattt tcctgtcttt
    12721 caaaccttag cgtatatctc ctgccaaaca tacaaaatac aagccaagca gtgatatact
    12781 gcatcccaac acaccaaacc gccgatacgc agtttcagcc gaaaggaaat gccccaaatg
    12841 aataacgctt tcgcattacc cgccatccaa agcggcaacg gcagcctcga acaatacatc
    12901 cacaccgtca acagcatccc gatgctgtcc caggaagaag aaacccgcct cgccgaacgc
    12961 cggataaagg gcgacctcaa cgccgccaaa caactcatcc tgtcccacct gcgcgtcgtc
    13021 gtttccatcg cgcgcggcta tgacggctac gggctgaatc aggccgacct gattcaggaa
    13081 ggaaatatcg gtctgatgaa ggcggtcaaa cgctacgagc ccggtcgagg tgcacgcctg
    13141 ttttcatttg ccgtgcattg gattaaagcg gaaattcacg aattcatcct gaggaactgg
    13201 cgccttgtcc gcgttgccac caccaaaccg caacgcaagc tgtttttcaa cctgcgcagc
    13261 atgcgtaaaa accttaatgt cctgtctccc aaagaggcac aagacatcgc cgacgatttg
    13321 ggtgtcaaac tttccgaagt tctggaaatg gaacagcgca tgacgggaca cgacatcgcc
    13381 atcatggcag acaacagcga cgacgaggac agtttcgccc ccatcgactg gcttgccgac
    13441 cacgattccg aaccgagccg acaactatcg aaacaggcgc attacgccct gcaaaccgaa
    13501 ggcctgcaaa acgccttggc gcaattggac gacaggagcc gccgcattgt ggaaagccgc
    13561 tggcttcaag acgacggcgg actgacgctg caccagcttg ccgccgaata cggcgtatct
    13621 gccgagcgca tccgccagat tgaagcgaaa gccatgcaga aactgcgcgg tttcctgacc
    13681 gaagaagccg aagcggtttg aaatatacac aataaaatac ccgacaaaac aatttgtcgg
    13741 gtattttatt tggtaaacat caatgcggtt tgtgcgtcgt gccgtacacg attttatccg
    13801 cccaagccat cgcaatcgcc aaaatcaaaa agcagacatg caccagacac tgccacatca
    13861 gctgcttttc cgacagattg gcggaattga taaatgtttg gagcaaatgg atggatgaat
    13921 accgataatc gacatcgaca gccttacctt caataccggt gcattcacat ggctcaacca
    13981 ctcgggccgg tcaggatggt cgtcgatacg caaccgggat acgaacgact catacccgcc
    14041 aatctgcacc atggtcagca aattcgcaat cataaccaca tcaatcagat ttaaaacagc
    14101 gagcatgatg gcgttttcgt ccgacacatc caaattcatg accagatgct tcaacgattt
    14161 caaaaactta taggcacaaa tcgcccgtac aacagtcagc cccgcataaa tcggcacttg
    14221 cagccaacgg cttgcaaaaa tcattttggc aaaaaaccca tagcctgttc gggttttgga
    14281 gattttgctt gatacatttc ccttccttgc agcaacaaaa gcgcgtgatt ccaatctacc
    14341 actgcgaaat cttcaatttt tcacacccga aaacgcttgc cgccatacag atgtgatata
    14401 ttgattccat tttaacgaac ttcggagaac gacatgagca gcggaaatat ccgcatccac
    14461 agcatgaccg gctttgccaa cgcggcggca gagtgcggca gcaaacgcat caacctcgac
    14521 atccgcgccg tcaaccaccg ctttttggac attcaaatca ggatgcccga cgatttgcgc
    14581 catttggaaa acggcatccg cgagcagatt tcatcccatc tggcgcgcgg caaagtcgaa
    14641 tgcaaaatcc aaattcaaga tgcggaaaac ggcaatcagt ctttggaact gaatcgcgtt
    14701 ctggtcggac agcttgccga aatcaacaaa aacctccgca aacattatga tttggcaaaa
    14761 ctgggcgttg ctgatatttt gcgctttccg ggcgtattgg caagccaaaa ggaaaatacg
    14821 gaagcattgg cgaaaaccat tgtcgaactg gccgacaaag cactaaaaga ctttaccgcc
    14881 gcacgtcggc gtgaagggaa aaaattgggc gaacacctgt tacaacgcat taaaaacatg
    14941 gaagaaatca tcgatgcttt gagcgaaatc ttccccgcgc tggtggaagc gcataaagaa
    15001 aaaatccgca cccgccttgc cgaagccgtc ggcagcatcg acaacgacag gctgcaacag
    15061 gaatttgccc tctttatcca aaaatccgac atcgacgaag aattcagccg cctgcgcacc
    15121 cacattgccg aagtgcgccg tatcgttacc gaacacaaag gcagcagcgg caaacggttg
    15181 gacttcctga tgcaggaact gaaccgcgaa gccaacactt tgggcagcaa atccatcgct
    15241 accgaatgca cccaagcctc ggtcgagctg aaagtcctga tcgaacagat gcgcgaacag
    15301 gtgcagaata tcgaataacc ctgcctttct ctccaaacat gacaatgccg tctgaaactt
    15361 ttttcagacg gcattcttga tcggctgaaa acctctgttg caagcaattc aagattgttc
    15421 tttcacatcc accaacctcg ttccggcaag gaagtcatac agaaactgcc ggtcgggatt
    15481 cagcagggcg aacccccacg gaaaaatcag ccaaaccaat gccgcgccgg ccgcgccctt
    15541 gggcggaatg ccgaggaagt ggcgcaatcc ggcataagca agcataggaa tgaagacgat
    15601 gaatatgcac gcccaaataa agcgcaggcg cagcaggtgc aaagacggct gtatgccgtt
    15661 aaggtcgcac aagccgattt tccatgtcct catcgccaag gtctgcccct gaccgtgcca
    15721 gttggcgcgg aaataaagcc accatgctcc cattatcagg atactcgtta ccaatgcaga
    15781 aaccgcgata gaaacgggat tcagaaaaat ggcggcaata ccggcaagca atgctgccaa
    15841 acaggtcgcc gcaccgacca gcagcatctc atacagtatg gcggcaaagc ggcgtttgag
    15901 cggggcggtt ttcagtatca tcatcttttc aatcggaata tgccgtctga aacgccaaca
    15961 gacttcagac ggcatttgtg caaagatgcc ttgcggcggt taacggtgcg gacgtttctg
    16021 accgcgcgac tgttttgccg ccatttgatt gatttcctga cgtgtcgggc gttttttgaa
    16081 catagcgtgc gcctcgtcca ccgaacattt ttgcgacagg cagatcaggg taatcgcatc
    16141 tttctggtgt tgtccgccgc tgtggtacat acggcgcagg tttgcctcgt tgattctgcc
    16201 tttttcggga tcgatgtcga attttttcag acgttcgata aactggcgtt gctgtcggcg
    16261 ggatgtccaa acaaagccgc ccgcagcggc ggcggcgatg acggcggcaa gcaggatggc
    16321 aagcggccag gaatcgacaa tcaatacgat aatgaggctt aaaacggcgg tggtcagtaa
    16381 aatcaggccg cccaagcgca gtttggtctt attgtccata gggttgatgt tcctttattg
    16441 aggtggtcgt gccgtctgaa atgttttcgg acggattggt gaatactttt caggattaac
    16501 ggtattttac agtattttcg gattttgggg attaccgctt tattccgcca gcgacacgac
    16561 aagctgtttg aataccgtcc atgcgtcgcc gtcttccgcg cctttgatga ttcggtcgat
    16621 ttgggcgcag gttttgagcg cgtcaagcag gcggacgacg gaaatccgct tgaccgcaag
    16681 cggtgcgagc gtctgtttgt cgccccaaag cctgaggctg ttgcggacgg attggatgct
    16741 ctgcccctgt ttcagggcag cggcaagccg aatcagcgtc cgcacgtctt cggcaaccgc
    16801 ccacagaagc agcaccggtt cttcgccttc ttcctccaac ccgtccaaca gcctgcatac
    16861 gcgcgggaca tcgcccttca tccacgcgcc tgccagttgg aacgcgtcga agcgggcaac
    16921 attggcaacg gcggtttgcg cctcatcgat attgacggca tgccctttcg gatacagcag
    16981 cgcgagcttg tcgatttcct gacgtgccgc caacagattg ccttccacgc gctcggcaaa
    17041 cagtgccaat gcgtctgcct cgatacccaa accgattttg tccagccgtc cgcgtatcca
    17101 ttggggcaaa gccgccgcac cgaccggttt ggcttcccac acttccccct ttgccgccaa
    17161 tgcggcaaac catttggact ggagccgggt tttctccagt ttgggcagca aaaccagcgt
    17221 taccgtatct tccggcagtc gggcggcaaa atcctgcaat gcctcgccgc cgtttttgcc
    17281 gggttttccg ttggggatat gcaattccaa cagtttcaaa tcggcaaaca gacccgcatt
    17341 gcctgcggtt tgcagcagtt cgttccaatc gaaagacgcg tcggcggtat aggcttcgcg
    17401 gttgagataa ccctgcttct tcgccgccgc cctcaatgcg tccactgcct cgatacgcag
    17461 cagttcttcc tcgccgtgga tgacgtacag aggtttcaaa ggcgcgtccg tatcgatgcg
    17521 tccgatatgt gccgccacgt cattccgcct tcagaaaggt caggcggcgg acaatctgtt
    17581 cggcaacatc ctgccgcatt tccgcccaca gggtttcttc ttcctgtttg cccaaaattt
    17641 cgttgtcggc ataatccaaa atgcggcgga cggacacggt catcggtttg ccgaccggct
    17701 cgccgcgttt caatacctgc gcttcaaccg tcaatatcaa aagatattcg ttgatgactg
    17761 ccgcacgggt aacggtatag gtttccttgt tttgggaaac gctgtctata cgcagggtca
    17821 tctgcgcgcc ggcagcatcg tccaccctgc ccgaagcctg atacagcgcg gtttccaaag
    17881 gaaactgcaa tgcctgtccg ccttcgatgt gccagctccg gtaggtcagc ggcggagaaa
    17941 tgccgtctgc acctttcagg tggaaaccgc acgcgcccag caccaaggct gcggcagtaa
    18001 ggaatatttt gttcatcgct tgcctttctc aaaaacataa agtcggtaga ttatatcagc
    18061 ggcgtgttca gacggcattg ccgtccagcc aaatcaggct cgccatacgc cccgtcgctc
    18121 cgtcgcggcg gtaggaaaag aaaatatccc gttccaaaac cgtacaatgc gtgccgccgt
    18181 acacgccgcc cacgccttcg cgcctcagaa tcaggcgggc gagcgcgtag aggtcggcaa
    18241 ggaatttgcc gccgccgatg ggttcaaatg cagcagcggc ttcgggcatg gacgtgcaga
    18301 acgcatcaaa cacgtcctgc ccgacttcaa acgcatccgc actgatggca gggccgagat
    18361 acgccataat ttcgacaggc ggaaccttca tcgcggcaat ggtgttttgc aatacgccgc
    18421 ccgccaaacc gctccagccc gcgtgtgcgg cggcaaccgc cgtacctgcc ctgtcgcaaa
    18481 atagaacggg cagacagtct gcagtcatca cggcacagac ggctttaccc gtgtcgtcca
    18541 cggaagcgtc ggcatcgggc gtgccgtcca atgcttcggc agcattgacg acaatggtgc
    18601 tgtggatttg attgagatag gcaacgggca atccgacctg ctgttgcacg atttcgcggt
    18661 tgcggcgcac ggtttcaggg tcgtcgccga cgtgcgtacc gaggttcaaa ctctgatacg
    18721 caccttggct cacgccgccg ttgcgcgtgg taatcagggt tttcacattg gcgggcgcgg
    18781 gccaatcggc ggtcaggaag tttttgcctt tcggggcgag atttagggtt tctgtgatgg
    18841 ttttcattgg atattggaat aggtgtgcgg cggaaagggt tgattaactg ccttcggggc
    18901 aaatggatgc ttgttttttc gtcattcccg cacaggcggg aattcggaga ttcgggattg
    18961 ttttcaaacg ttcgggtcgg attcttgccg gtgcgggaat gatgccctta tatactttct
    19021 ccgagcttta tatgcttcaa caggggacgg cacatcaagc accgcactgc gtgttgcccg
    19081 aacgaggctg ccctccgatt agattctatc gctataaaca gacgggtttc aaccgaaaag
    19141 gaatggggat aaagtccatt tccgacacct ctcgggcgat gccgtctgaa aaccaatctc
    19201 cactttcaga cggcattgtt taggcgcggt cattttgcaa attaaggtta aggcgtgtat
    19261 gcttgccttc ccttaaaaac aaacacgcaa cgcattatta tgaatatcct cagtaaaatc
    19321 agcagcttta tcggaaaaac attttccctc tgaacctcgc tctttgccgc cgccgctttt
    19381 ttcgcgcccg acaccttcaa atgggcgggg ccttatattc cttggctgtt gggcattatt
    19441 atgttcggta tgggtttgac gctcaaacct tccgacttcg atattttgtt caaacacccc
    19501 aaagccgtca tcatcggcgt aatcgcacaa ttcgccatta tgccggcaac cgcctggctg
    19561 ccgtccaaac tgttgaacct gcctgccgaa atcgcggtcg gcgtgatttt ggtcggctgc
    19621 tgcccgggcg gtacggcttc caatgtgatg acctatctgg cgcgcggcaa tgtggctttg
    19681 tcggttgccg ttacgtctgt ttccaccctg atttccccat tgctgactcc cgccatcttc
    19741 ctgatgcttg ccggtgaaat gctggaaatc caagcggccg gtatgttgat gtccatcgtc
    19801 aaaatggttt tgctccccat tgttttgggt ttgattgtcc ataaggtttt gggcagtaaa
    19861 accgaaaagc cgaccgatgc gctgccgctg gtttccgttg ccgccatcgt gctgattatc
    19921 ggcgcggtag tcggggcaag caaaggcaag attatggaaa gcggcctgct gatttttgcg
    19981 gttgtcgtac tccgcaacgg catcggccac ctgctcggct tctttgccgc caaatggacc
    20041 ggcctgcctt atgatgcaca aaaaacgctg gccatcgaag tcggtatgca aaactcgggc
    20101 ctggccgccg cgcttgccgc cgcacacttt gccgccgcgc cggtcgttgc cgttccgggc
    20161 gcattgttca gcgtgtggca caatatctcc ggctcgctgc tggcaactta ttgggcggcc
    20221 aaagccggta aacataaaaa accctaaacg cctttcatca taatgccgtc tgaacggggc
    20281 aaccgaaacc ggcggtttct gcccggcccc ttcagacggc ctttgtttga aatcggcggg
    20341 gacgattgcc cggctgctcc ggttcggctg cctgcgttcg ccccgccttt caagccgcct
    20401 cactccctta cataaaccac ttcgacatcg tagtcgtctt cgttccaatc gtcatcgtcg
    20461 tccgcgccga atttgtcctg ccattcctct tcattgctca aagacgaatc caaaccggct
    20521 tcaagacgga ggacggacaa caaatgatat atgtcgtccg gaatcggtgc ctcaaacgaa
    20581 acggtttcgc cgctttccgg atgggtaaaa ctcaagcggt aggcgtgcaa cgcctgacgc
    20641 gcgcccaaac ttttaacggc ttctttcacc gtgtcgccgc acggatggcg cgggttgccg
    20701 taaaccgggt cgccggcaag cggatggttg gcctcgcgca tatggacgcg gatttggtgc
    20761 gtcctgcccg ttccgagcga gcattcgatg tagctgtggg caagatagcg ttccaacact
    20821 ttgacgtggg ttacggcagg cttgccgccg aatttgacgg ctgccatttt caggcggttg
    20881 tgcggatcgc gtccgatttg ggtttcgatt ttaccgtcaa aggggacgat gccgttggcg
    20941 acggcgcggt agatgcgttt gaccgtgcgt tcttgaagct gcctcacgag ggaattttgc
    21001 gccggcaggg ttttggcaac caccatcagc ccgctggttt ctttgtccaa acggtgtacg
    21061 atgcccgcgc gcggaatttg ggacagctcg gggcaatgcg ccaacaggcc gttgagcagc
    21121 gtccccgtcc agttgcccgc cgccggatgc accaccagtc cggccggttt gttgacgacg
    21181 atgacggtat cgtcttcgta aacaatatcc aaatccatag gctccggaac aaacgccaga
    21241 ttttcctcac tcggacggac ggttacacaa atttgctcgc cgcctatcat tttgtctttg
    21301 ggttgcgaag gtttatcgtt tacaataacc gcgccttctt taatccatga tgtcaggcgg
    21361 ctgcgcgaat agtcgggcag aagtttcgcc aacaccgcat ccaaccgccc gccggcaagc
    21421 tcgggcggaa cggtcagacc gatacggttt tcagttccgg aagctgacgc aaagtctgaa
    21481 tcgtcgctat aatcggattc attatcaaag gaagtattct gcatgaaaaa aattctttta
    21541 acggtttcat taggtttggc actgagtgcc tgtgccactc aaggtacggc cgataaagat
    21601 gcccagatta cccaagattg gagtgtggag aagctctatg ccgaagccca ggacgaattg
    21661 aacagcagca attatacgcg ggctgtcaag ttatacgaaa tcttggaatc gcgcttcccc
    21721 accagccgcc atgcccggca atcccaactg gataccgcat acgcctatta taaagacgat
    21781 gaaaaagaca aggctctggc ggcaatcgaa cgcttccgcc gcctccatcc gcagcatccg
    21841 aacatggatt acgcgctgta cctgcgcggc ttggtgctgt ttaacgaaga ccagtccttc
    21901 ctgaacaaac tggcatcgca agactggtcc gaccgcgacc cgaaagccaa ccgcgaagcg
    21961 taccaggcgt ttgcggaact cgtccaacgc ttcccgaaca gcaaatacgc cgccgatgca
    22021 accgcacgca tggtcaaact ggtcgatgct ttgggcggca atgaaatgtc ggtggcgcgt
    22081 tactacatga aacgcggcgc atatatcgcc gccgccaacc gcgccaaaaa aattatcggc
    22141 agctatcaaa atacacgcta tgtcgaagaa tcactggcca tattggaact tgcctacaag
    22201 aagttggaca agccccagct tgccgccgat acgcgccgcg tattggaaac caacttcccg
    22261 aaaagcccgt ttttgacgca cgcttggcag cccgacgata tgccctggtg gcgttactgg
    22321 cattaagccc atcctcgaaa tgccgtctga agccctttca gacggcattt tccgttccgg
    22381 caccagcctt cccgttcact caaacggttt tttctgccaa tagaatttat acactctcaa
    22441 acgttgagcc tttacgcctc cgcgtcccaa gccgaattgc agcgcgcccg acaaatccgt
    22501 ccgcaacaac ttgatgccgt gtgcgcggac acggttctgc accgcttcgg tcggatgctt
    22561 gtaggcgttg gcataaccgc ttgaagcaac ggcatattcg ggcgaaacgg cattgaggaa
    22621 cacgcccgac gaggacgtat tgctgccgtg atgtcccaaa accaaaacct ggctgtacag
    22681 gtttgagccg tattttttaa ccaactccgc ctcacctttc gtatccaaat ctcccgttac
    22741 cagcagtgcc gcaccgcccg ccacaacacg caaaacacaa cttttcccat tatcatcgat
    22801 atttttgcgt tcagacggcc tcaaaaactc gaaatccacg ccgtcccatt gccaacgctg
    22861 ttccgcacaa tgccgcgccc cctcataaaa ttccggctgt ccggcataaa tcccgccgtt
    22921 cggtatcttg ccgactgcct gaaagccgcc gtcgtggtcg ctgtcgtgat gcgacagaac
    22981 cagcttgtcc aaacggcgga cacccgccgc attcaaactc ggcacgatac ccgtttgtgc
    23041 cgccgctacc gttcccgtat cgaaaagcag atggcggttt gccgtccgca caagcaccga
    23101 caagccctgc cccgcatccc aaaccgtaac cgcagcttcg ttttcaggta ctgcttcagg
    23161 acggtaggat acaaaccctg ccaacagcaa caccgcccac ggacgcaaac ccaagccgcg
    23221 cggcagcagc aacagcaaag cggcacacac cgccaacacc agcagcggca aaggtgcggc
    23281 ggcaacggca aactcaggcg acacatcggc aagccacacc aaaaaccgca aagtgtattc
    23341 cgccaaaaat gcccccgcct gctgaagcgg cgcaaacggc acgaccgaac ccagcaacgc
    23401 cagcggggtc aacacccaag aaaaccacgg tatcgacacc gcattgacca aagggctgac
    23461 caaaggcagc gaggcaaaca gataaccgag caaaaccaga gacaacaccg aagccgccca
    23521 ctgcccgcgc acggcggttt gccgtttccc ctcgtacaaa cgccctgcac acgcccatat
    23581 cagggccgcc accaaaccga aagacagcca agtaccgaca cccaaaaccg ccaaagggtc
    23641 gaacagcagc accgccgcca acgcctgcca ccacgtcgcc cacgccgaca gtcttcccct
    23701 gcgccacgcc cacgcgaacg ccgccaacat caaaacactg cgctgcgtcg gcacggaaaa
    23761 accggcaagc agcgcgtaaa acagcgcgcc cgcacacccc gccgccaaaa cccacgcgcg
    23821 cggccgggcg ggaaggcgcg gggaacaggc aagcagccgc ttcgccagcc acgcaaacag
    23881 caccgccacc atcgtaacgt gcaaacccga gatactgacc aaatgcgtca gtcccaacgg
    23941 ccggaacgcc tgccacaatt cggggcgcaa tgccgactgt tcgcccacgc tcaacgcgcg
    24001 catcagcccg atgccgtctg aaagcccgcc gtccgcatcc gcctgccgcc aattgcggct
    24061 gatgcggctg cgccaaaccg caatccccca accgcttccg ccatgcagca aaaccctgtc
    24121 cgcaccgacc gtccccacgc cgcctatccc gttggataat gcccacgcct cacggttcaa
    24181 accgcgcagg ttcaactccc cgacgacggg gtgcacgcgt gccgttatcc gccatctgct
    24241 cccgaccgcc cattcgcgcc gtttgtagtc cgacagcagc aaatcgaacg tccgaccgcc
    24301 gctgtccaca gcctttgcag caaactgcac gcgccgcccg tccgacctcg gcatatccgc
    24361 cacttccacc gtcaaaggca cgcctgaaac cgcctccgcc cgccattgcg aagacagtgc
    24421 cgcttccgtt ctgaatacgc cgtaagccgc gcccgccaac acgcacagca tcagaccggc
    24481 aaacgcaaaa cgccttgcaa gcacagccaa aaccgcaaaa gccgccaacc aaaacggcca
    24541 atgcggtaca accgacagtg cgaacgaaac tgccacgccg acaacccaac acggcaaaaa
    24601 ccaacgacgg aacacgtctc cccactcccg atataaaaaa caaacgatga taaagcaaag
    24661 ccataaaacc gtcataacaa gatttgaaaa tgataagaat gcaaacgaaa agcctcagta
    24721 ttatccgaga caacggcaaa ctttccatcg tcattcccgc aaaagcggga atccaaagac
    24781 aaaaagccgc agaaatttat cggaaagaac cgaaccacaa aaaccggctt cccaccttcg
    24841 cttgaataac agaacaaaga aagcggaaat aaaaacatca ggattctttt ttaaattggc
    24901 aataaaacac caaaatgaat gagttacaca aaaaaatact caacaccacc caaccggcgt
    24961 aaaatgcaaa acattatcgc tattaaaacg gtaaaacctt atgaaagcca aacgttttaa
    25021 aattaacgcc atatccttat ccatctttct tgcctatgcc cttacgccat actcagaagc
    25081 ggcattggtg agagacgatg tcgattatca aatattccgt gactttgcag aaaacaaagg
    25141 caaatttttt gtcggcgcaa ccgatttatc agtgaaaaac aaacgaggtc aaaacatcgg
    25201 caacgcatta tccaacgtac cgatgattga ttttagcgtt gcagatgtca acaaacgcat
    25261 agcaacggta gtcgatcccc aatatgccgt cagcgtcaaa cacgccaaag cagaagtcca
    25321 tactttttat tacggccaat acaacggtca taatgatgta gccgacaaag aaaatgaata
    25381 ccgcgttgtc gaacaaaata actatgaacc ccataaagct tggggtgcga gcaatttagg
    25441 ccgcctcgaa gattataata tggcgcgttt taataagttt gtaaccgaag tggcaccgat
    25501 tgcaccaact gatgccggcg gcggattgga tacctacaaa gataaaaacc gtttttcctc
    25561 ttttgtcaga atcggtgcgg gcaggcaatt agtttatgaa aaaggggttt atcatcaaga
    25621 aggaaatgaa aaaggctacg atttgcgcga tctttcacaa gcctatcgtt atgccattgc
    25681 aggtacgcct tataaagata ttaatattga ccaaacaatg aataccgaag gtttgatcgg
    25741 ctttggtaat cataataaac agtattcggc agaagaactt aaacaagcac tttcgcaaga
    25801 tgcgttaaca aattacggcg tgttgggcga tagcggctct ccgttatttg cttttgacaa
    25861 acaaaaaaat caatgggtct ttttgggaac ttacgattat tgggcaggtt acggaaaaaa
    25921 atcatggcaa gaatggaata tctataaaaa agaatttgca gataaaatca aacaacacga
    25981 taacgccggc accgtcaaag gtaatggaga acatcattgg aaaaccacgg gtacaaacag
    26041 ccatatcggt tcgacagcgg taaggcttgc caacaatgaa ggagatgcga acaacggaca
    26101 aaatgttacc tttgaagaca acggcacttt ggtattgaat caaaacatca accaaggcgc
    26161 gggcggcctg tttttcaaag gcgattacac agtcaaaggc gcaaataatg acatcacttg
    26221 gttaggtgcg gggattgatg ttgccgacgg caaaaaagtc gtttggcaag tcaaaaatcc
    26281 gaatggcgac agattggcaa aaatcggcaa aggcactttg gaaataaacg gcacaggcgt
    26341 taaccaaggg caattaaagg tcggcgacgg tacggttatt ctgaatcaaa aagccgatgc
    26401 cgacaaaaaa gttcaggctt tctcccaagt cggcattgtc agcggacgcg gtacattggt
    26461 attaaatagt tcaaatcaga ttaatcccga taacctatat ttcggtttcc gtggcggtcg
    26521 tttggatgcc aatggcaatg acttgacttt tgaacacatc cgcaacgtgg atgaaggcgc
    26581 gcgcattgtc aaccacaaca cagaccacgc ctccacaatc acactaacgg gtaaatcttt
    26641 aattaccaat ccgaacagcc tttcggtaca tagcatacaa aatgactatg atgaagatga
    26701 ttatagttat tattaccgac caaggcgacc catcccacaa ggcaaagatc tttattacaa
    26761 aaactatcgt tattacgccc taaaatccgg cggcagcgtg aacgcaccga tgcccgagaa
    26821 cggtgtagca gaaaataacg actgggtctt tatgggatat acgcaagaag aagccaagaa
    26881 aaacgcgatg aaccacaaaa acaatcagcg tattagcggt tttagcggtt tctttggcga
    26941 agaaaacgaa aaaggacata acggggcatt aaaccttaat ttcaacggca aaagcgcgca
    27001 aaaccgtttc ttgttaacag gcggcgccaa tttaaacgga aaaataagcg taactcaagg
    27061 caatgtcttg ttatcaggtc gtccaacacc acacgcaaga gattttgtga acaaatcttc
    27121 agcccgaaaa gacgcacatt tctccaaaaa caatgaagtc gtatttgaag acgactggat
    27181 aaaccgcaca ttcaaagccg cagaaattgc ggttaaccaa tccgcatcat tctcttccgg
    27241 aagaaatgta tccgacatca ccgccaacat caccgcaaca gacaacgcca aagtaaattt
    27301 gggttacaaa aacggcgatg aggtttgcgt gcgctcggac tataccggtt acgttacctg
    27361 caacacaggc aacttatccg ataaggcttt aaacagcttt gatgcgacac ggattaacgg
    27421 caatgtgaat ttgaatcaga atgcggcatt ggtcttgggc aaggctgcat tatgggggaa
    27481 aattcaagga caaggaaaca gccgtgtcag cctaaaccaa catagcaaat ggcatttgac
    27541 cggcgacagc caagtacaca atctgtcatt ggcggatagc catattcatt tgaacaacgc
    27601 ttccgatgcg caaagtgcaa ataaatacca cacgatcaaa atcaatcatt tatccggtaa
    27661 cgggcatttt cattatctga cggacttggc gaaaaatctt ggggataaag tgcttgtgaa
    27721 ggaatccgca tccggccatt atcagctcca tgttcaaaat aaaacaggcg aacctaatca
    27781 ggaagggctg gatctctttg atgcatcatc cgtacaagac cgctcccgcc tttttgtttc
    27841 cttggcaaat cattacgtcg atttaggcgc attgcgttat acaatcaaaa cagaaaacgg
    27901 tattacccgg ttgtacaatc cttatgccgg gaaccgccgc ccagtcaagc cggccccgtc
    27961 tcctgccgca aacacggctt ctcaagcaca aaaggcaaca caaacggacg gtgcacaaat
    28021 tgccaagcct caaaatatcg tcgtcgcacc gcccagcccg caggcaaatc aagccgaaga
    28081 agccctccgc caacaagcaa aagcggagca agtgaagcgt cagcaagcag cagaagcaga
    28141 aaaagttgca cgtcaaaaag acgaagaggc aaaacgcaaa gcagccgaaa ttgctcgtca
    28201 gcaggaagaa gcacgaaaag ctgcagagtt agccgccaaa caaaaggcgg aagcagagcg
    28261 taaagccaga gagttggcaa gacaaaaagc agaagaggca agtcatcaag ctaatgccaa
    28321 accaaaacgt cgtagacgtc gggctatatt acctagacct cctgcgccag tattttcatt
    28381 ggatgattat gatgcaaaag acaatagtga atcatcaata ggtaatttag ctcgtgtaat
    28441 acctagaatg ggaagggagt taattaatga ttatgaagaa atccccttgg aggagttgga
    28501 agatgaagcg gaagaagaac gtcgccaagc aacgcaattc caacccaaaa gtcgtaaccg
    28561 tagagctata tcatcggaac catcatctga tgaagatgca tctgaatcgg tttccacatc
    28621 agacaaacac cctcaagata atacggaact tcatgaaaaa gttgagacgg cgggtttaca
    28681 accaagagcc gcgcagccgc gaacccaagc cgccgcgcaa gccgatgcag tcagcaccaa
    28741 tactaactcg gctttatctg acgcaatggc aagcacgcaa tctatcttgt tggatacagg
    28801 tgcttcatta acacggcaca ttgcacaaaa atcacgcgct gatgccgaaa aaaacagtgt
    28861 ttggatgtca aacaccggtt atggccgtga ttatgcttcc gcacaatatc gccggtttag
    28921 ttcgaaacgc acgcaaacac aaatcggcat tgaccgcagc ttgtccgaaa atatgcagat
    28981 aggcggagta ttgacttact ctgacagtca gcatactttt gatcaggcga gcggcaaaaa
    29041 tacttttgtg caagccaacc tttatggtaa gtattattta aatgatgctt ggtatgtggc
    29101 cggcgatatt ggtgcgggca gcttgagaag ccggttacaa acgcagcaaa aagcaaactt
    29161 taaccgaaca agcatccaaa ccggccttac tttgggcaat acgctgaaaa tcaatcaatt
    29221 cgagattgtc cccagtgcgg gtatccgtta cagccgcctg tcatctgcag attacaagtt
    29281 gggtgacgac agtgttaaag taagttctat ggcagtgaaa acactaacgg ccggactgga
    29341 ttttgcttat cggtttaaag tcggcaacct taccgtaaaa cccttgttat ctgcagctta
    29401 ctttgccaat tatggcaaag gcggcgtgaa tgtgggcggt aaatccttcg cctataaagc
    29461 agataatcaa cagcaatatt cagcaggcgc cgcgttactg taccgtaatg ttacattaaa
    29521 cgtaaatggc agtattacaa aaggcaaaca attggaaaaa caaaaatccg gacaaattaa
    29581 aatacagatt cgtttctaaa atactaaatt catagcaaaa taaaatgccg tctgaactca
    29641 agcttcggac ggcattttta tcagactaac aaagctacag ctcaatgcct ttgagtttcg
    29701 ccacggtatt gatgtctttg tcgccgcgac ccgacaggtt gaccaaaatc acttggtctt
    29761 tacccatttt cggcgcgttt ttcaccgccc aagcaacggc gtggctggat tcgagcgcgg
    29821 ggatgatgcc ctcgaatcgg cagagcaagt caaaggcttc gagtgcttcg tcatctttgg
    29881 caacggtgta ttcgacgcgc ttgatgtcgt gcagatggct gtgttccggg ccgatgccgg
    29941 ggtaatccaa gcctgcggaa acagagtgcg tccccaagac ttggccgttt tcgtcctgca
    30001 tcagatagct gcggaagccg tgcagtacgc caatcggtgc gcccgaagta atcggcgcgg
    30061 cgtggtcagg cgtatccacg cccaaaccgc ctgcttctac gccgaccaaa cgtacgtttt
    30121 cttcttcgat atagggatag aacaaaccga tggcgttcga gccgccgccg acgcaggcaa
    30181 cggcgacgtc gggctgtctg ccgatagctt cctgcatctg cgctttggct tcgttgccga
    30241 tgacgcattg gaaatcacgc accatttcgg gatacggcgc ggggccggcg gcggtgccga
    30301 tgatgtagaa cgtatcgtcc actcgggcga cccattcgcg catcgcttcg ttcatcgcgt
    30361 ctttcaaagt acggctgcca ctgtcaacgc cgatgacatt cgcaccaagc agcttcatac
    30421 ggaacacatt cggcatttgg cgttgaatat cgtccgcacc catgtacacg tcgcaagtca
    30481 tgccgaaacg tgcggcgacg gtggcagaag ccacgccgtg ctgacccgcg ccggtttcgg
    30541 cgatgacgcg ttttttgccc atacggcggg caagcaatgc ctgaccgatg gtgttgttga
    30601 ccttgtgcgc gccggtgtgg ttcaagtctt cgcgcttcaa ccagatttgc gcgccgccca
    30661 aatgctcgga caaccgcgcg gcgtggtaaa cggggctggg cctgccgaca taatgtttca
    30721 aatcgcggcg gaactccgcc caaaattcag gatcgttttt cgcttcgttg taggcctgtt
    30781 ccagctcttt caaagcggga atcagggttt cggaaacata aagcccgccg tgttcgccga
    30841 aaaagccctt ttcgtcgggc gcgtggtagt tcttcatcgg attcttcctt atgcttcagg
    30901 ttttcagacg gcatttccgt tttttcaaac atgccgtctg aacgggaaat tgtcggcaat
    30961 tataactgct tttcacacaa gcccgccatt tcgaaaaacg cccgatacgc cgctgccttt
    31021 ttcgccaaac tcaaaggata ggcgcgcgaa gtcgaaggca ggcgcgtcag tgtcaaatcc
    31081 cgtccggcaa acggaaacgg cacggtttcg cccgttttcg gcattttgat gccgccgccc
    31141 tgaatatcga gcaggatttc cgtcgccttg ccgcctgtcg tacaaatatg gcggcagtct
    31201 ggtattttcg ccaacaccgc cgccaaatcg acggtttcaa ctacctttaa aaacttgtcg
    31261 gacgcattgc cgtgctccct tgccgccttc aacacggtcg gacaggacgc aatcccccgt
    31321 tcgtgcaaaa acgccttgat tttctccgcg tcaaacgctt tttcagagtg cgcagcctcc
    31381 ccgtgggacg gcatccggaa atgcgccgca tcgttaaaaa acaccagccc gtaaacgcgc
    31441 cacatatcgt tttggaaatt cggataatga aactgcatcg cgcgtttgtc ttccttgggc
    31501 ggaaacgtcc ccatcatcat gaccgcagcc ttcggcggca acacgggatc gaagggatgg
    31561 gtttcgattt caagcagatt ttcagacacg ttcaatcctc caacaggcaa agcggcagac
    31621 agccggtttg caccaaaccg ccaaacacgg caagccttca aacagcatta tcacgccctg
    31681 ccgttttcgg ttacaatgcc gacatcaaac ggatactgta aacacattta tgttccaaca
    31741 cacaggacga cacataaagc accgccctat gtgtcgtcct gatttggaag gggttacgcc
    31801 ccgcccaaac agagtctgat cctgccgccc taaagggcgg ggtttcaacc gaagaggaaa
    31861 cacgatgaaa gaacacaaag cccgcaagcg tttcgggcag aattttttgc aggacacgcg
    31921 gattatcggc gatattgtca acgccgtgcg cccgcaggcg gatgatgtcg tgattgaaat
    31981 cggcccgggt ttggcggcaa ttaccgaacc tttggcgaaa aagctgaacc gcctgcacgt
    32041 tgtcgaaatc gaccgcgaca tcgtatgccg tctgaaaacg ctgccgtttg cggataaact
    32101 ggtgattcac gaaggcgacg tgttgcagtt tgatttcaac ggcatctcag gcaaaaagaa
    32161 aatcgtcggc aacctgccgt ataacatctc cacgccgctt ttgttcaaac tggcggaggt
    32221 ggcggacgat gtcgccgata tgcactttat gttgcaaaaa gaagtggtcg agcgcatggt
    32281 tgccgcgccg aaaagcaacg actacggtcg cttgggtgtg atgctgcaat attttttcga
    32341 tatggagctg ctgattgacg tgccgcccga atcgttcgat cccgcgccga aaatcgattc
    32401 cgcagtggtg cgcatgattc cggtgaaaca ccgtatcggc aaggcggacg atttcgagca
    32461 tttcgccaaa ctggtgaaac tcgccttccg ccaacgccgc aaaaccatac gcaacaatct
    32521 gaaagagctt gccgacgacg atgatttgca ggcagtcggc atcagtccgc aagaccgtgc
    32581 cgaacacatc gcgccggaga aatatgtggc gttgagcaat tatctggcgg acaaggccgt
    32641 ctgaaaaggg acgcggcgat ggaaagcaac ctgcagaaaa ccgagcgttt gatccgcgaa
    32701 atcaaccgcc tgcacgcaca atattcgcag gattattttg aaaccggcaa agtgcggaaa
    32761 atcaatttga gccacacgct caaaaacgtt ccgaccgaac atattttgtc ttaccgcctt
    32821 aatttgcacg aagcagttaa cgattattta gcctttgccg atacgcgcgg catagacttt
    32881 ttctaccgcg tgaaaaccgc agaaagcata catgataaaa tcaaccgcta tctggcacgc
    32941 ggcacccaat atccgaccaa caacatcctg aacgatattt tcggcgcgcg gctgatttgg
    33001 ccgtctgaaa cagtcgccgg gattttagaa aaacttgacg gctggaaaac agaatacggc
    33061 ttgaaaaact ggtatttgcg cgatgccggc ggctatatcg gcatacacat ttatttcaaa
    33121 aacagcagca atttctacta tccgtgggaa ttgcaggttt gggatgaaaa agatgccaaa
    33181 gccaatattg aaaaccatat ggcgtacaaa cggaatttcg tgcgttgaat tgccggcaag
    33241 ccgccttgaa accgtttata actgtttata agagaataaa ccataaaata cacaaacgta
    33301 ttcctgactt ttcctttaac cgcccgagtg aacaaactat gaaatacaca gccgcactcc
    33361 tgacttttct tttaactgcc tgcatgaacc cgaacgatgc gtttttccaa aaccggcatt
    33421 atcaaatgcc ggaggcgcaa ttgaacggtt caaacgccgt tttccattac ggttattccc
    33481 aaaatcccga tcatgattta ttggtcgacc aagtccgcgt gccggacgcg tacagggctt
    33541 catttgcgcg ggattggata gcgaaggagc aaggttaccg caaaaacgac tgcgtactgg
    33601 aaaaagcgga aagcgggggt gtgacgtact acacctgcga tgcggaaaaa ggattcaacg
    33661 gcacacgttt cgtcatctat gtcgtgaata tgaaaaacga caaaggctac gtcaaagttt
    33721 accggggcat gaataagccg aatcaggaag agttaaccaa attggttgcc gatttgaata
    33781 agttttaccc ttaatcagcc agacggattc agactgcccg aaaagaatgg acactatgat
    33841 caaattcaaa aacgtacaca aacatttcaa agacctgcac gtcatcaacg gcgtaaactt
    33901 ggaaatcaaa aaaggcgaag tggtcgtcgt ctgcgggcct tcgggcagcg gcaaatccac
    33961 actcatccgc accgtcaacc agcttgaaag catcgaaagc ggcgagattt gggtggacgg
    34021 cgtcaacgtt gccgacccca aaaccgattt gaacaaaatc cgcgaagaag tcggctttgt
    34081 gtttcaaagt ttcaacctct acccgcacct gaccgtgttg gacaacatca ccctcgcacc
    34141 gatgaaggtt aaggggcaaa atgcggaaca ggcggagaaa aaggcaatgg agcttttgga
    34201 acgcgtcgga ctggcacaca aaaaagacgc cttcccttcc caactttccg gcggccagca
    34261 gcaacgcgtg gcgattgcgc gcgggctggc gatggagccg cgcgtgatgc tgtttgacga
    34321 gccgacttcc gcactcgacc ccgaaatggt cggcgaagtg ttgaaagtga tgaaagactt
    34381 ggcggaaagc ggcatgacga tgatgtgcgt aacccacgaa atggggtttg cccgcgaagt
    34441 tgccgaccgc gtgattttcg tcgataaagg gcaaatcctt gaagacgaaa cgccggaagc
    34501 gtttttcacc aacccgaaac acgaacgcgc caagcagttc ctgcaacaag tcatgaccca
    34561 ttgatgctat gccgtctgaa aaccgaacgt tcagacggca tagcccgaca ccgcaagatg
    34621 attgagaaag cacaccatgt attttgttga ccgcaccgcc gccgtcctca agccgaccgc
    34681 gcgctttttg gaatggctca aaagcaccga cgaaaatatg cccgacctga ccatagaaca
    34741 gcttcgcgcc gactgttccg tcttcctcgt tccgcagttc gacgaaccgg aagccgtcgt
    34801 ttcctacttc gacgaacgct accggcagat ttttgacgcg gagctggcag gttgggacat
    34861 cgacaaggac aaatggccgc aagatatggg gctgaaggcg ttttgggaat ttttcgacat
    34921 tgaaatccac gatatggttt tggatatgga agaagcggat ttgaacatca cgcccgtgtt
    34981 cgacaatatg atgtaacgcc atgcgcgcct ttcagacggc attgaggccg tcccgcatcc
    35041 tgaacatcct gaccgtatca ctccactcgg cttccattgc cgtctgcctg acttggtttt
    35101 acggccggat gatgtggttc ggtttggcgg ctttggcggc aagttacgca tactcgctca
    35161 ggataacgaa tctgaaacac cgccatgcca taaccgccat taccatagac cgcgacggac
    35221 gggcggaaat cgtatccggc aaagacaaaa cagcggcaac acttgcgggc agcagtatgg
    35281 ttacgcctta tgccttattc ttacaatggg acacaggcgg caaaaccgtc cgccaatgca
    35341 tcatgcccga catgacggac aaagaatcct accggcggct gaaagtctgg gtgctttggc
    35401 ggcagccgaa aaaaaccgcc gaaaccgata catcagactg atttcagacg gcatttgaaa
    35461 acgaaacact catgaaaaca ctacaagact ggctctcgca tttggaaacc gcccacagcg
    35521 gcggtttgat cgacatgggt ttggagcgcg taagcgaagt aaaaaagcgc atgaacctga
    35581 caccgcaatg ccccgtcgtc gtcgtcgcgg gaacaaacgg caaaggttcg gtctgcgcct
    35641 acctgacaca gatttacaaa caggcaggct tcaaaaccgg cacgctgacc agcccgcatt
    35701 tattgcatta caacgaacgc atcgccatca acgccgaacc cgtttcggac gatacgatta
    35761 ttgcctcttt cgagcgcatc gaagccgcgc gcggcgaaat atcgctgact tattttgaat
    35821 tcaatgcctt ggcggctgtc gacatcttca tacgcgaaca agtggatgta atgatattgg
    35881 aagtcggctt gggcggacgt ttggacgcgg tcaacgcgtt tgacggcgat tgcgcggtgg
    35941 ttactagtgt ggatttggac catcaggcat ttttgggcga tacggtcgaa caggtcggct
    36001 ttgaaaaggc aggcgtgttc cgcagcggca aacccgccat ctgcggtcaa aaccccgcgc
    36061 ccgcatcatt ggtcgcacac gccgaagcca taggcgcgaa actgctgatg gtacagcgcg
    36121 atttcgagtt tcacgcgatg gaaaacatcc aatggaacta ccgcttccgg ccgcagcatt
    36181 cagacggtcc cgcacgcaac cgcaatgccc tgcccttccc cgcattgcgc ggcgcatacc
    36241 agctttctaa cgccgcctgc gcgttgaccg tattggaatg cctcgacgac agactgccgg
    36301 tggacattgg tgcaatcaaa cgcgggctgc tgctggttga aaatcccgga cgcttccaag
    36361 tcctgcccgg ccggccgctg accgtattgg atgtcggaca caacccccac gccgcccgcg
    36421 ccctgcgccg caacctgatc aaccttgcct acgcgcaaaa gcgcaccgcc gtgttcagta
    36481 tgctgtccga caaagacata gacggcgtgt cggaaaccgt taaagaccag tttgacgagt
    36541 ggtatatcgc gcctttggac gtgccgcgcg gtatgacggc ggatgcactg aaagccaaat
    36601 tggaacaaca ccacatcgaa aacatacaga cattcgccgc cgtccgcgac gcgtaccggg
    36661 cggcagcctc aaaagcgggc gaagacgaca gaatcgtcgt attcggctca tttcataccg
    36721 tcgccgacgt aatgtcggta ctgtgaaaag gaaacttcta tgtccgaaaa caaacaaaac
    36781 gaagtcctga ccggttacga acagctgaaa cggcgcaacc gccgccgcct cgtaacggca
    36841 agctccctgg ttgccgcctc ctgcatcctg ctggcagccg cactcagttc cgatcctgcc
    36901 gacagcaatc ccgcaccgca ggccggcgaa accggcgcaa cggaaagcca aacggcaaac
    36961 acggcacaaa cccctgcctt gaaatccgcc gccgaaaacg gggaaaccgc cgccgacaaa
    37021 ccgcaggact tggcaggcga agacaagcct tctgccgccg acagcgaaat cagcgagcct
    37081 gaaaacgtag gcgcgccgct ggtgctgatt aacgaccggc tcgaagacag caacatcaaa
    37141 ggtttggaag aatccgagaa actgcaacag gcagaaaccg ccaaaaccga accgaagcag
    37201 gcaaaacaac gcgctgccga aaaagtgtcg gcaactgccg acagtacgga tacggtagcg
    37261 gttgaaaaac cgaaacgctc tgccgaaccc aaaccgcaaa aagcggaacg cactgccgaa
    37321 gccaagccca aagccaaaga aaccaaaacc gccgaaaaag ttgccgacaa accgaaaact
    37381 gctgccgaaa aaaccaaacc ggatacggca aaatccgaca gcgcggtaaa agaagcgaaa
    37441 aaagccgaca aggctgaagg caaaaagaca gccgaaaaag accgttcgga cggcaaaaaa
    37501 cacgaaacgg cgcaaaaaac cgacaaagcg gacaaaacca aaaccgccga gaaggaaaaa
    37561 tccggcaagg cgggcaaaaa agccgccatt caggcaggtt atgccgaaaa agaacgcgcc
    37621 ttgagcctcc agcgcaaaat gaaggcggcg ggtatcgatt cgaccatcac cgaaatcatg
    37681 accgacaacg gcaaagttta ccgcgtcaaa tcaagcaact ataaaaacgc aagggatgcc
    37741 gaacgcgatt tgaacaaact gcgcgtgcac ggcatcgccg gccaggtaac gaatgaatag
    37801 cctccccatt gccgacctcc tcgcctccgc cgtcatcgcc gcctgcatcg tcatttccac
    37861 gatgcgcggc gtgattgcgg aagcaggttc gatggtggca tgggtggttt ccttcttttt
    37921 tgccaaactc tttgccgcac ccttcgccga cctcgccttt gcctcgttcc aaccccgcct
    37981 gtttgcattg gctctgtcat tcatttccct gttcgtcatt gcctgtctga tccagaaaat
    38041 gctccgttcg ctgctgaccg gcgcagtttc ggcggtcggt ctgggctttg ccaaccgcat
    38101 tttgggcggt gtattcggtg cattgaaagg cgttttgatt gttaccctgc tgatcatgct
    38161 tgcttcaaaa accgacctgc ccgataccga agaatggcaa cagtcctata ccgtaccgtt
    38221 tttcgtatcg ctttccgaag cggtgttaaa ccatacggac aacgcacccg aatccctcga
    38281 cgacgactaa tccgcatacg tggcgtttca gacagcatac ctgatttatg ccgtccgaaa
    38341 cgccttttct ttccttgaca caccccgaca gacaaagcgc acctgcctga ctttacacaa
    38401 atattgtcaa caattcgggc aaaaagccgc cgtttgcttt ataattccgt ttcaccctta
    38461 aacctcgaat cggagaagac gatatgtgcg gcgtattagg tttggtcagt catgaacccg
    38521 tgaaccagct tctgtacgac ggtttgcaga tgttgcagca cagggggcag gatgcggcgg
    38581 gcattgcaac ggcggaaggc ggtaccttcc atatgcacaa aggcaaaggg atggtgagcg
    38641 aagtgttccg cacgcgcaat atgcgcgatt tgaccggcaa cgccggcatc gcccacgtcc
    38701 gttatcccac ggcgggcaac gccggcagca gcgcggaggc gcagcctttc tacgtcagct
    38761 cgcctttcgg catcgttttg gcgcacaacg gcaacctcac caacactgcc gaactgtatg
    38821 aaaacgtgtg taacaaacac ctgcgccaca tcaacaccgg ctccgattcc gaagttttgc
    38881 tcaacgtatt cgcgcacgaa ttgcgccgcg aagtctctaa aaacgccgac ccgcaccggc
    38941 tcaatgccga caatattttc aacgccgttg ccgaagtcca ccgcctggtg cgcggtgcat
    39001 acggcgtggt tgccatgatt gcgggctacg gtatgctcgc cttccgcgac ccttacggca
    39061 tccgcccgct ggcattgggt tcgcaaaccg acagcgaagg caggaaatcc tatgccgtcg
    39121 cctccgaatc cgtcgccttc aatgcgcttg cctacgattt ggaacgcgat atccggccgg
    39181 gcgaagcggt atttgtcggc tttaacggca caatcatcgc ccgacaatgc agcgaccgcg
    39241 ccaaactcag cccctgcctt tttgaatatg tttattttgc ccgccccgac tccgtgattg
    39301 acggcgtgtc cgtttaccag tcgcgcttgg atatgggcgt gtccttggcg gaaaaaatca
    39361 aacgcgagct gcccgtggac ggcatcgacg tcgtgatgcc cattcccgac accagccgcc
    39421 ccagtgcaat ggaacttgcc gtccacctca aaaagcctta ccgcgagggt ttgattaaaa
    39481 accgctatat cggccgcacc tttatcatgc ccggtcagtc gacgcgcaaa aaatccgtgc
    39541 gccaaaaact cagcccgatg gaaaccgaat ttgcaggcaa aagcgtgttg ctggtggacg
    39601 actccatcgt gcgcgggacg accagccgcg aaatcgtcga aatggtacgc gcggcgggcg
    39661 cgcgcaaagt ctatatcgcc tccgccgcgc ccgaagtgcg ctatcccaat gtgtacggca
    39721 tcgatatgcc cacgcgcgaa gagttgattg ccaacgggcg cagcgcggcg gaaatcgccg
    39781 ccgaaatcgg cgcggacggc atcgtgtttc aagacttggg cgatttggaa gccgtcgtca
    39841 aagcactcaa cccgaaaatc gaatccttcg attcgtcctg tttcaacggc atttatcgaa
    39901 ccggcgacat cgatgatgcc tacctcgacc gcctgtctgc cgagaaatcc ggctgcgccg
    39961 gtctgaaaat ccacccgagc aggatggaac acagcatcag catcagcgat gcgggcgacg
    40021 aagaataagg cttcccaaac cgcgatgccg tctgaaatcc gaacgttggg ttttcagacg
    40081 gcatttccca tatcggcatc acatttcccg tttcatccgc acacaatatg agtaccgaaa
    40141 ccaaaaacta cattacgccc gccggctggc aggcattgaa agacgagctt tatcaactgg
    40201 tcaataaaga acgccccgaa atcgtccaaa tcgtcaactg ggcggcaggc aacggcgacc
    40261 gcagcgaaaa cggcgactat ctttacggca aacgccgtat gcgcgaaatc gaccgccgca
    40321 tccgtttcct gaccaaacgt ttggaggctg ccgtcgtcgt cgatcccgaa ttgcgcgaag
    40381 cgaccgacca agtatttttc ggcgcgaccg tcggtctgtt gcgcggcgac gggcgcgagc
    40441 aaaccgtcaa aatcgtcggc gtcgatgaaa tcgataccgc gcaaaacaaa atttcttgga
    40501 tttcgccgtt ggcgcgttgc ctgattaagg cgcgcgaagg cgacgaagtg gttttgaaca
    40561 cgccggaagg ccgtgaggaa attgaaatcc tttctgtcga atacatcaaa atcgactgat
    40621 cgggaatgcc gtctgaaacg gcacaagcgc accgtttccc aaataaagga ataccgaatg
    40681 aggaaaatcc gcaccaaaat ctgcggcatc accacaccgg aagacgcact gtatgccgcc
    40741 cacgccggcg cagacgcatt gggactggtt ttttaccccc aaagcccccg cgctatcgac
    40801 atcattaaag cacaaaaaat cgccgccgca ctgccgccgt ttgtcagcgt tgtcgccctt
    40861 ttcgtcaacg aaagcgcgca aaacatccgc cgcatccttg ccgaagtgcc gatacacatc
    40921 atccaattcc acggcgacga agacgatgca ttctgccggc agttcgaccg cccctatatt
    40981 aaagccattc gtgttcagac ggcatcagac atccgaaacg ccgccacgcg cttccccaac
    41041 gctcaggcac tgctgttcga tgcctatcac ccttcggaat acggcggcac cggacaccgc
    41101 ttcgactgga cgctgttggc ggaatattcg ggcaagccgt gggtgcttgc cggcgggctg
    41161 acccctgaaa acgtcggcga agccgtccgc atcaccggag cggaagcggt cgacgtatcc
    41221 ggcggcgtgg aagcgtctaa aggcaaaaaa gaccccgcca aagtcgccgc ctttatcgca
    41281 accgccaacc gcctatcccg ttaaagcaac aaaaattgcc gccggaatga cttatag
//
LOCUS       DAXFZM010000007        40941 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.007, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000007 DAXFZM010000000
VERSION     DAXFZM010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 40941)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 40941)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..40941
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.007"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..300)
                     /locus_tag="ACFJAG_000282"
     CDS             complement(<1..300)
                     /locus_tag="ACFJAG_000282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HFC3979678.1"
                     /translation="MDMQSKAKKLIEMIQTAPVEWKPLGEVLVRTKGTKITAGQMKEM
                     HKDNAPLKIFAGGKTFALVDFDDVPDKDIHREPSIIVKSRGIIEFEYYDKPFSHKN"
     gene            complement(467..1318)
                     /gene="dinD"
                     /locus_tag="ACFJAG_000283"
     CDS             complement(467..1318)
                     /gene="dinD"
                     /locus_tag="ACFJAG_000283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA damage-inducible protein D"
                     /protein_id="HFC3979679.1"
                     /translation="MTTENNAFENAKHIDETGNEYWSARTLQQILEYSEWRNFQRAID
                     KAITACETSGNDKNHHFVETNKMIALGKGGQREVADYRLSRYACYLIVQNGDPSKSVI
                     AAGQTYFAVQARRQELQDEAAFRSLGEDKQRLLLRRQLREHNTDLAAAAKDAGVEKPV
                     EYAVFQNHGYRGLYGGLDKQGIHSRKGLKKSQRILDHMNASEPAANLFRATQTEEKLR
                     RKNIQGKTQANRVHFEVGQKVRQTIEELGGIMPENQPVPEKSIKQLENEEQKRLAATE
                     QHQNGKK"
     gene            complement(1434..2986)
                     /locus_tag="ACFJAG_000284"
                     /pseudo
     CDS             complement(1434..2986)
                     /locus_tag="ACFJAG_000284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687840.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0009007 - site-specific
                     DNA-methyltransferase (adenine-specific) activity
                     [Evidence IEA];
                     GO_process: GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction-modification system subunit
                     M"
     gene            complement(3061..4065)
                     /gene="rfaD"
                     /locus_tag="ACFJAG_000285"
     CDS             complement(3061..4065)
                     /gene="rfaD"
                     /locus_tag="ACFJAG_000285"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008712 - ADP-glyceromanno-heptose
                     6-epimerase activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HFC3979680.1"
                     /translation="MTIIVTGAAGFIGSNIVKALNQRGITDIVAVDNLTKGEKFKNLA
                     ECEIAHYLDKHEFIRQVREHILPYQNIEAVFHQGACSDTMNHDGLYMMENNYQYTLDL
                     LDWCQDERIPFLYASSAAVYGKGEIFREERELEKPLNVYGYSKFLFDQVLRRRMKEGL
                     TAQVVGFRYFNVYGQHEQHKGRMASVAFHHFHQYREHGYVNLFGSNDGYGNGEQTRDF
                     VSVEDVAKINLYFFDHPELSGIYNLGTGRSQQFNELAAAAVNACRAAEGKSELSLKEL
                     VEEELIRYIPFPDALKGKYQGFTQADITKLREAGYKEEFFDVKAGVNRYVKWMLENLA
                     "
     gene            complement(4129..5091)
                     /gene="hldA"
                     /locus_tag="ACFJAG_000286"
     CDS             complement(4129..5091)
                     /gene="hldA"
                     /locus_tag="ACFJAG_000286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-heptose synthase"
                     /protein_id="HFC3979681.1"
                     /translation="MPAKFQQETLKSRFAQAKVLVVGDVMLDRYWFGDVSRISPEAPV
                     PVAKIGRIDQRAGGAANVARNIASLGGRAGLLSVTGDDEAAAALDALMVQDGVASYLM
                     RDKQIATTVKLRVVARNQQLIRLDFEEHPNREVLEQIKRKYREILPEYDAIIFSDYGK
                     GGLSHISDMIDWAKHVGKTVLIDPKGDDYEKYVGATLITPNCAELKEVVGSWKNEGDL
                     TEKAQNLRRHLDLTAVLLTRSEEGMTLFSEGEPIYQPTRAQEVYDVSGAGDTVIAGMG
                     LGLAAGCTMPEAMYLANTAAGVVVAKLGTAVCSFAELVEALDGQ"
     gene            complement(5147..5887)
                     /gene="pyrF"
                     /locus_tag="ACFJAG_000287"
     CDS             complement(5147..5887)
                     /gene="pyrF"
                     /locus_tag="ACFJAG_000287"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003756133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004590 - orotidine-5'-phosphate
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0044205 - 'de novo' UMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HFC3979682.1"
                     /translation="MNPLITDFQTPQQRTPVIVALDFANEKDTLGFVRNLDPALCQIK
                     IGKELFTATGRSLAESLIHQGFKLFLDLKYHDIPHTVAQACKVAADMGVWMVDMHASG
                     GRRMMEAAAEAVAGYGTKPLLIGVTVLTSMEQSDLAEIGLNTAPEEQVIRLAKLAQSS
                     GLDGVVCSAQEAAPLRRELGRDFVLVTPGIRLDVAGNNDDQRRIMTPAEALAAGSTYL
                     VMGRPVTRAADPVAVLREVNRVANLEAN"
     gene            complement(6411..7058)
                     /gene="adk"
                     /locus_tag="ACFJAG_000288"
     CDS             complement(6411..7058)
                     /gene="adk"
                     /locus_tag="ACFJAG_000288"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004017 - adenylate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HFC3979683.1"
                     /translation="MKALLLGAPGAGKGTQAQFITAAFGIPQISTGDMLRAAIKAGTP
                     LGLEAKKIIDEGGLVRDDIIIGMVKERIAQDDCKNGFLFDGFPRTLAQAEAMVEAGVG
                     LDAVVEIDVSDSVIVDRMSGRRVHLASGRTYHVTYNPPKTEGKDDVTGEDLIQRDDDK
                     EETVKKRLAVYHEQTEVLVDFYSKLEGEHAPKYIKVDGTQAVEAVKAEVLGALGK"
     gene            7273..8112
                     /gene="htpX"
                     /locus_tag="ACFJAG_000289"
     CDS             7273..8112
                     /gene="htpX"
                     /locus_tag="ACFJAG_000289"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protease HtpX"
                     /protein_id="HFC3979684.1"
                     /translation="MKRIFLFLATNIAVLVVINIVLAVLGINSRGGAGSLLAYSAVVG
                     FTGSIISLLMSKFIAKQSVGAEVIDTPRTEEEAWLLNTVEAQARQWNLKTPEVAIYHS
                     PEPNAFATGASRNSSLIAVSTGLLDHMTRDEVEAVLAHEMAHVGNGDMVTLTLIQGVV
                     NTFVVFLSRIIANLIARNNDGSQSQGTYFLVSMVFQILFGFLASLIVMWFSRQREYRA
                     DAGAAKLVGAPKMISALQRLKGNPVDLPEEMNAMGIAGDTRDSLLSTHPSLDNRIARL
                     KSL"
     gene            complement(8348..9646)
                     /locus_tag="ACFJAG_000290"
     CDS             complement(8348..9646)
                     /locus_tag="ACFJAG_000290"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004019 - adenylosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HFC3979685.1"
                     /translation="MAKNVVVIGAQWGDEGKGKIVDWLAEEAGGVVRFQGGHNAGHTL
                     VVGGKKTILRLIPSGILHEGLDCFIGSGVVVSPEALLGEIDELNAAGVKNVEGRLKIA
                     PTCPLILPYHIALDQAREASRGKGKIGTTGRGIGPAYEDKVARRAIRAADLLHPEKLR
                     EKLDAVLAYYNVQLQYLHNAGPVKAEDVMAVIEKVAPRIAPMIADVSRVLNEKNKNGE
                     KLLFEGAQGALLDIDYGTYPFVTSSNCLAGAASAGAGVGPQMLDYVLGIVKAYTTRVG
                     SGPFPTELFDEVGAGLAERGHEFGSVTGRARRCGWFDAAALKRSIQINGISGMCITKL
                     DVMDGVETINICVGYELPGGGKTDILPCGSDAVETCKPIYETMPGWRESTVGVKSYDA
                     LPANAKAYLKRIEEVCGAPVAIVSTGPDREETIVLHHPFA"
     gene            complement(9751..10902)
                     /locus_tag="ACFJAG_000291"
     CDS             complement(9751..10902)
                     /locus_tag="ACFJAG_000291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HFC3979686.1"
                     /translation="MQTWQLPEHIADVLPTNARQLESAREQLLALFRVHGYELVQPPL
                     MEYAHSLLTHIDAGLSLKTILVTDRLSGRQLGIRADITPQVARIDAHLLSANQGINRL
                     CYAGPVLHAQPDGLPNMREPLQAGAEMYGFADIRGDIELIDLMLKSMKIADMGKVLLS
                     LGHIGIFRALSDAAHLDAGQSATLLALMQDKDTGSVEAQVKAWKLDGMWAKAFSLLPR
                     LYGGREVLSDARGRLPDLSAVGGALDELQAVCDAFPDNEIHIDLSELRVDNYHTGLLY
                     AAYAADFHDAVARGGRYDGLGGYFGRARPATGFSFDLRSFIGRLPAVERQPAVLVDAE
                     DAEAAREAVEALREQGQCVVIDYGIGHNVSEELAGRLKKTDGVWQIVKR"
     gene            11237..12616
                     /locus_tag="ACFJAG_000292"
     CDS             11237..12616
                     /locus_tag="ACFJAG_000292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-coupled multidrug efflux MATE transporter
                     NorM"
                     /protein_id="HFC3979687.1"
                     /translation="MLLDLDRFSFSVFLKEIRLLTALALPMLLAQVAQVGIGFVDTVM
                     AGGAGKEDLAAVALGSSAFATVYITFMGIMAALNPMIAQLYGAGKTGEAGETGRQGIW
                     FGLILGIFGMILMWAAITPFRNWLTLSDYVEGTMAQYMLFTSLAMPAAMVHRALHAYA
                     SSLNRPRLIMLVSFAAFVLNVPLNYIFVYGKFGMPALGGAGCGVATMAVFWFSALALW
                     IYIAKEKFFRPFGLTAKFGKPDWAVFKQIWKIGAPIGLSYFLEASAFSFIVFLIAPFG
                     EDYVAAQQVGISLSGILYMIPQSVGSAGTVRIGFSLGRREFSRARYISGVSLVSGWVL
                     AVITVLSLVLFRSPLASMYNDDPAVLSIASTVLLFAGLFQPADFTQCIASYALRGYKV
                     TKVPMFIHAAAFWGCGLLPGYLLAYRFDMGIYGFWTALIASLTIAAVALVWCLEKYSM
                     ELVKSHKAV"
     gene            12660..13700
                     /gene="murB"
                     /locus_tag="ACFJAG_000293"
     CDS             12660..13700
                     /gene="murB"
                     /locus_tag="ACFJAG_000293"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008762 - UDP-N-acetylmuramate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HFC3979688.1"
                     /translation="MQPIRYRTDLTPYNTFGLHAQARAFIALKHADELRDIVRLPEFD
                     RDTVLWLGGGSNILLMQDYDGLVVHMENKGIREIARSDGMVLIEAQAGEIWHDFVLHT
                     VALGLSGLENLSLIPGTVGASPVQNIGAYGVEAKDVIHSVRCFDLDTETFVTLSNADC
                     RFAYRESLFKQEGKGRYVIVSVVFALKTHFVPNLGYGDLAAKVAELSAGREATAKDVS
                     DAVSAIRNSKLPDPKVLGNVGSFFKNPVVSAEKAATLLQRHPDMPRYPQPDGSVKLAA
                     GWLIDQCRLKGFQIGGAAVHDKQALVLVNKNNASANDVRQLAQHIKFTVFARFQVELH
                     AEPNWLPASFSL"
     gene            13712..14362
                     /locus_tag="ACFJAG_000294"
     CDS             13712..14362
                     /locus_tag="ACFJAG_000294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HFC3979689.1"
                     /translation="MPVTRIAKTNTYTRIIDASLALFNEEGERNISTNHIAAHLGISP
                     GNLYYHFRNKDEIIVQLFKRYSEALLEYLNEAVLPSDVEDSINYMAGIYDVMWEYRFL
                     FSDVNTLLARSAELLGEHNTFTQAKVSPLLVKLLTQLNGLNVINADQTAMNDLAVNMW
                     MVTKYWFDFDSSLRGRTKLTEDSKARGVRRTLSLLRPYLLPEHRAEYDRKIGNGNP"
     gene            14417..15193
                     /locus_tag="ACFJAG_000295"
     CDS             14417..15193
                     /locus_tag="ACFJAG_000295"
                     /EC_number="1.1.1.290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HFC3979690.1"
                     /translation="MRAVPPPHISITGLGYLGLPLAQKFYRHGSRVAAIKRSLTSDDI
                     NLPIHLDTFDLNRTDAFQTALWRHHADKPVWFFLLPPSFLAHYADTVKQWAELARACN
                     VQHLIFTSSTSVYGDKARECDETAAPDPQTESARQILAAEQHLLDNGVPNIDILRLGG
                     LYCAERHPVSRLVQKQNIQGGNRPVNIVHRDIAVENLFQTASNPGGRRLKNIIEPRHP
                     TRREFYTEEAAKLGLPAPDFSPDDSVGKIIRTVCDNGLSL"
     gene            15243..15809
                     /locus_tag="ACFJAG_000296"
     CDS             15243..15809
                     /locus_tag="ACFJAG_000296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032934 - sterol binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SCP2 domain-containing protein"
                     /protein_id="HFC3979691.1"
                     /translation="MSALLPIINRLILQSPDSRSELTSFAGKTLTLNIAGLKLAGRIT
                     EDGLLSAGNGFADTEITFRNSAIQKILQGGEPGAGDIRLEGDLILGIAVLSLLGSLRS
                     RASDELARIFGTQAGIGSRATDIGHGIKQIGRNIAEQIGGFSREPESANTGNEALADC
                     LDEISRLRDGVERLNERLDRLERDIWID"
     gene            15829..16719
                     /locus_tag="ACFJAG_000297"
     CDS             15829..16719
                     /locus_tag="ACFJAG_000297"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003951 - NAD+ kinase activity [Evidence
                     IEA];
                     GO_process: GO:0006741 - NADP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) kinase"
                     /protein_id="HFC3979692.1"
                     /translation="MNSPFHNIGIVTRPNTPDIQDTAHTLITFLKQHGFTVYLDEVGV
                     RECCIYTQDTDGCHIVNKTELGQYCDLVAVLGGDGTFLSAAREITPRAVPIIGINQGH
                     LGFLTQIPREYMTDKLLPVLEGKYLAEERILIEAALIREGKTAERALALNDAVLSRGG
                     AGQMIEFEVFVNQEFVYTQRSDGLIVSTPTGSTAYSLAAGGPIMQAGLHAFTLVPICP
                     QSMTNRPIAIPDTSEIEILVTQGGDARVHFDGQSFIDVQNLDRIIIRRYHNPLRILHP
                     TDYQYFKTLRQKLHWGEQLV"
     gene            16744..17502
                     /locus_tag="ACFJAG_000298"
     CDS             16744..17502
                     /locus_tag="ACFJAG_000298"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HFC3979693.1"
                     /translation="MNSKISSDHTEDTIHLSKRMAQLGLCSRREADGHIEQGWVTVNG
                     KTAVLGQKVSPADRIELNKKAHEQQAARITILLNKPVGYVSAQAEKGYKSAAELITPE
                     NCWEGDTSRISFDPKHKIGLAPAGRLDIDSVGLLVLTQDGRIAKQLIGENSGSEKEYL
                     VRVRGKLDEKGLALLNHGLSLDGDKLRPAKVEWQNEDQLRFVLKQGKKRQIRRMCELV
                     GLRVVGLKRIRMGKVKLGRLPPGKWRYLAPGESF"
     gene            complement(17557..18222)
                     /locus_tag="ACFJAG_000299"
     CDS             complement(17557..18222)
                     /locus_tag="ACFJAG_000299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HFC3979694.1"
                     /translation="MTVLSKEQVLSAFKNRKLCRHYDAARKISAEDFQFILELGRLSP
                     SSVGSEPWQFVVVQNPEIRQAIKLFSWGMADALDTASHLVVFLAKKNARFDSPFMLES
                     LKRRGVTEPDAVEKSLARYQAFQADDIKILDDSRALFDWCCRQTYIALANMMTGAAMA
                     GIDSCPVEGFNYADMERVLSGQFGLFDAAEWGVSVAATFGYRVQEIVTKARRPLEETV
                     IWA"
     gene            complement(18419..19192)
                     /gene="folE2"
                     /locus_tag="ACFJAG_000300"
     CDS             complement(18419..19192)
                     /gene="folE2"
                     /locus_tag="ACFJAG_000300"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003933 - GTP cyclohydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase FolE2"
                     /protein_id="HFC3979695.1"
                     /translation="MNAIADVQSSRDLRNLPINQVGIKDLRFPITLKTAEGTQSTVAR
                     LTMTVYLPAEQKGTHMSRFVALMEQHTEVLDFAQLHRLTAEMVALLDSRAGKISVSFP
                     FFRKKTAPVSGIRSLLDYDVSLTGEMKDGAYGHSMKVMIPVTSLCPCSKEISQYGAHN
                     QRSHVTVSLTSDAEVGIEEVIDYVETQASCQLYGLLKRPDEKYVTEKAYENPKFVEDM
                     VRDVATSLIADKRIKSFVVESENFESIHNHSAYAYIAYP"
     gene            19395..20552
                     /locus_tag="ACFJAG_000301"
     CDS             19395..20552
                     /locus_tag="ACFJAG_000301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aspartate aminotransferase family
                     protein"
                     /protein_id="HFC3979696.1"
                     /translation="MKFPTRAIHSGYDCDEHNRALMPPIYQNSMFALHEIGENVPYRY
                     SRLSNPTRQILEDTVADLEHGAAGFAFSSGMAGIDAVWRTFLRPGDTIVAVADIYGGA
                     YDLLVDVYQKWGVNVVFADLGNPDNLDELLKAHNVKLVWLEMPSNPLLRLVDIKALAA
                     KAKAADALVGIDNTFATPYLQQPLDMGCDFAFHSATKYLCGHSDVLMGIVVAKTKELA
                     QPLHDMMVHTGAIAGPTDCWLVLRGIKTLALRMEAHCKNALEIARRLEAHPAIEKVFH
                     PGLPSHEHYALAQAQMPKGIGGVVTVYLKNDTREAANSVIKNMKLVKMTSSLGGVESL
                     VNHCYSQSHSGVPHNVKMEMGIRVGLLRFSIGIEDVDDIWNDISAALDTTL"
     gene            complement(20616..21617)
                     /gene="hemB"
                     /locus_tag="ACFJAG_000302"
     CDS             complement(20616..21617)
                     /gene="hemB"
                     /locus_tag="ACFJAG_000302"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004655 - porphobilinogen synthase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HFC3979697.1"
                     /translation="MQFPYRNVPASRMRRMRRDDFSRRLMREHMLTADDLIYPVFVLE
                     GAAREEDVPSMPGVKRQSLDRLLFTAEEAVKLGIPMLALFPVVTANKTGRAQEAYNPE
                     GLVPSTVRALRERFPELGIMTDVALDPYTVHGQDGLTDENGYVMNDETVEVLVKQALC
                     HAEAGTQVVAPSDMMDGRIGAIREALEDAGHIHTRIMAYSAKYASAFYGPFRDAVGSS
                     GNLGKADKKTYQMDPANTDEALHEVALDIQEGADMVMVKPGLPYLDVVRRVKDEFGVP
                     TYAYQVSGEYAMLQAAVANGWLDGGKVVLESLLAFKRAGADGILTYYAIEAAKMLKR"
     gene            complement(21801..22085)
                     /gene="yhbY"
                     /locus_tag="ACFJAG_000303"
     CDS             complement(21801..22085)
                     /gene="yhbY"
                     /locus_tag="ACFJAG_000303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome assembly RNA-binding protein YhbY"
                     /protein_id="HFC3979698.1"
                     /translation="MADTKLNTKEILELKARAHHLHPVVMVGQQGLTDAVIKETDAAL
                     TAHELIKVRVFGDDRAERIEICNTLCEAVDAQPVRHIGKLLVLWRKNIEA"
     gene            22195..22815
                     /locus_tag="ACFJAG_000304"
     CDS             22195..22815
                     /locus_tag="ACFJAG_000304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RlmE family RNA methyltransferase"
                     /protein_id="HFC3979699.1"
                     /translation="MAVRSKSSKAWLHEHINDQYVHMAQKDGYRARAAYKLLEINEKD
                     KIIKPGTVLADLGSAPGSWSQVAAKLTGTSGAVFALDILPMEAIGGVSFIQGDFREND
                     VLAQFETLLDNRPLDLVICDMAPNMSGNAVSDQARSFYLCELALDFASQHLKTGGSFL
                     VKVFQGAGYQEYMAAMREIFGTVQTRKPEASRNRSSEIYLLGKNKR"
     gene            22879..24846
                     /gene="ftsH"
                     /locus_tag="ACFJAG_000305"
     CDS             22879..24846
                     /gene="ftsH"
                     /locus_tag="ACFJAG_000305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HFC3979700.1"
                     /translation="MGNTFKSILVWVALGIGLMAAFNALDGKKEDNGQIEYSQFIRQV
                     NNGEVSGVNIEGSVVSGYLIKGERTDKSTFFTNAPLDDNLIQTLLNKNVRVKVTPEEK
                     PSALTALFYSLLPVLLLIGAWFYFMRMQAGGGGKGGAFSFGKSRARLLDKDANKVTFA
                     DVAGCDEAKEEVQEIVDYLKAPNRYQSLGGRVPRGILLAGSPGTGKTLLAKAIAGEAG
                     VPFFSISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAVGRQRGAGLGGGN
                     DEREQTLNQLLVEMDGFESNQTVIVIAATNRPDVLDPALQRPGRFDRQVVVPLPDIRG
                     REQILNVHSKKVPLDESVDLLSLARGTPGFSGADLANLVNEAALFAGRRNKVKVDQSD
                     FEDAKDKIYMGPERRSMVMHEDEKRATAYHESGHAIVAESLPFTDPVHKVTIMPRGRA
                     LGLTWQLPERDRISMYKDQMLSQLSILFGGRIAEDIFVGRISTGASNDFERATQMARE
                     MVTRYGMSDKMGVMVYAENEGEVFLGRSVTRSQNISEKTQQDIDAEIRRILDEQYQVA
                     YKILDENRDKMETMCKALMEWETIDRDQVLEIMAGKQPSPPKDYSHNLRENADAAEDN
                     APHAPTREKTEAPAPADTASTESGQQPENKA"
     gene            25068..25499
                     /locus_tag="ACFJAG_000306"
     CDS             25068..25499
                     /locus_tag="ACFJAG_000306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RatA family
                     toxin"
                     /protein_id="HFC3979701.1"
                     /translation="MKKVEKNILVLHGADKMFELVDKVEDYPHFLPWYSKTEVIGRSG
                     NELKARLFMDYMRVRQSFATHNRNIPGREIRMELLEGPFKTLRGTWKFIDLGDDMCKI
                     EFNLEYDFSNAVLSALISPVFNHLSATLVEAFVKEADRRYA"
     gene            25492..25770
                     /locus_tag="ACFJAG_000307"
     CDS             25492..25770
                     /locus_tag="ACFJAG_000307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RnfH family protein"
                     /protein_id="HFC3979702.1"
                     /translation="MLEIEIVYGLPDRQVLKTMQLAEGTTVRTAALQSGLDGIFENLN
                     LHSAPLGIFGKAVKDDTPLRDGDRIEVYRPLLIDPKEARRKRVQNQEE"
     gene            25823..26401
                     /gene="pth"
                     /locus_tag="ACFJAG_000308"
     CDS             25823..26401
                     /gene="pth"
                     /locus_tag="ACFJAG_000308"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HFC3979703.1"
                     /translation="MSNTIKMVVGLGNPGKEYEQTRHNAGFWFLDELAWKWKASFKEE
                     KKFFGEVARAALPDGDVWLLKPATFMNRSGQAVAALAQFYKIKPEEILVVHDELDIPC
                     GRIKFKLGGGNGGHNGLKDIQAKLGTADYYRLRLGIGHPGDRNLVVGYVLNKPSAEHR
                     RQIDDAVAKSLQAVPDIISGKWEEATRFLHSK"
     gene            26462..26668
                     /locus_tag="ACFJAG_000309"
     CDS             26462..26668
                     /locus_tag="ACFJAG_000309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dioxygenase"
                     /protein_id="HFC3979704.1"
                     /translation="MTELKQLIQTESIPVIEETLDFLLYECSIDDAPSAEEVAQWRDI
                     LAARGGKFLRLSKICQTWLDEEAA"
     gene            26665..27027
                     /locus_tag="ACFJAG_000310"
     CDS             26665..27027
                     /locus_tag="ACFJAG_000310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VanZ family protein"
                     /protein_id="HFC3979705.1"
                     /translation="MKLPRNRFSLLSALWFAGGIYSLLFKAADTAPPPFPHFDKAAHL
                     ALFFAQILLLAKAFKTGKLPIPYRSLIAFAFCFAVGSECAQAWFTATRTGSLGDVLAD
                     LTGAALALFAARSACRPD"
     gene            27256..28671
                     /locus_tag="ACFJAG_000311"
     CDS             27256..28671
                     /locus_tag="ACFJAG_000311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008509 - monoatomic anion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006820 - monoatomic anion transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DASS family sodium-coupled anion symporter"
                     /protein_id="HFC3979706.1"
                     /translation="MNLHAKDKTQHPENVELLSAQKPITDFKGLLTTIISAVVCFGIY
                     HILPYSPDANKGIALLIFVAALWFTEAVHITVTALMVPILAVVLGFPDMDIKKAMADF
                     SNPIIYIFFGGFALATALHMQRLDRKIAVSLLRLSRGNMKVAVLMLFLVTAFLSMWIS
                     NTATAAMMLPLAMGMLSHLDREKEHKTYVFLLLGIAYCASIGGLGTLVGSPPNLIAAK
                     ALNLDFVGWMKLGLPMMLLILPLMLLSLYVILKPNLNERVEIKAESIPWTLHRVIALL
                     IFLATAAAWIFGSKIKTAFGISNPDTVIALSAAVAVVVFGVAQWKEVARNTDWGVLML
                     FGGGISLSTLLKTSGASEALGQQVAATFSGAPAFLVILIVAAFIIFLTEFTSNTASAA
                     LLVPIFSGIAMQMGLPEQVLVFVIGIAASCAFMLPVATPPNAIVFGTGLIKQREMMNV
                     GILLNILCVVLVALWAYAVLM"
     gene            28791..29300
                     /locus_tag="ACFJAG_000312"
     CDS             28791..29300
                     /locus_tag="ACFJAG_000312"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HFC3979707.1"
                     /translation="MIILHTNKGDIKIELDFDKAPVTAKNFEQYVKDGFYDGVIFHRV
                     IKGFMIQGGGMDENMNEKETRDPIQNEASNGLPNDKYTIAMARTSDPHSAGAQFFINT
                     ADNAFLNFRSKELYGKTVVQDWGYAVFGKVVDGFDVVDAIESVSTKRHGYHDDVPTEP
                     VIIIKAEAV"
     gene            29468..30850
                     /locus_tag="ACFJAG_000313"
     CDS             29468..30850
                     /locus_tag="ACFJAG_000313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HFC3979708.1"
                     /translation="MASITRDIFKAYDIRGIVGKTLTDDAAYFIGRAIAAKAAEKGIA
                     RIALGRDGRLSGPELMEHIQRGLTDSGISVLNVGMVTTPMLYFAAVNECGGSGVMITG
                     SHNPPDYNGFKMMLGGDTLAGEAIQELLAIVEKDGFVAADKQGSVTEKDISGAYHDHI
                     VGHVKLKRPINIAIDAGNGVGGAFAGKLYKGLGNEVTELFCEVDGNFPNHHPDPSKPE
                     NLQDLIAALKNGDAEIGLAFDGDADRLGVVTKDGNIIYPDRQLMLFAQDVLNRNPGAK
                     VIFDVKSTRLLAPWIKEHGGEAIMEKTGHSFIKSAMKKTGALVAGEMSGHVFFKERWF
                     GFDDGLYAGARLLEILSASDNPSEVLDNLPQSISTPELNISLPEGSNGHQVIEELAAK
                     AEFEGATEIITIDGLRVEFPDGFGLMRASNTTPILVLRFEADTQAAIERIQNRFKAVI
                     ESNPHLIWPL"
     gene            complement(30906..31661)
                     /locus_tag="ACFJAG_000314"
     CDS             complement(30906..31661)
                     /locus_tag="ACFJAG_000314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HFC3979709.1"
                     /translation="MIKIRNIHKTFGENTILRGIDLDVGKGQVVVILGPSGSGKTTFL
                     RCLNALEMPEDGQIEFDNARPLRIDFSKKTSKHDILALRRKSGMVFQQYNLFPHKTVL
                     ENVMEGPVAVQGKPAAQAREEALKLLEKVGLGDKVDLYPYQLSGGQQQRVGIARALAI
                     QPELMLFDEPTSALDPELVQDVLDAMKELAREGWTMVVVTHEIKFTLEVATNVVVMDG
                     GVIVEQGSPKELFDHLKHERTRRFLSQIQSAKI"
     gene            complement(31671..32387)
                     /locus_tag="ACFJAG_000315"
     CDS             complement(31671..32387)
                     /locus_tag="ACFJAG_000315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HFC3979710.1"
                     /translation="MFNNFLASLPFMTETRADMLISAFWPMVKAGFTVSLPLAIASFV
                     IGMIIAVAVALVRIMPSGGIFQKCLLKLVEFYISVVRGTPLLVQLVIVFYGLPSVGIY
                     INPIPAAIIGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAF
                     RVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFC
                     KVLFLIQARLEKRFDRYVAK"
     gene            complement(32377..33204)
                     /locus_tag="ACFJAG_000316"
     CDS             complement(32377..33204)
                     /locus_tag="ACFJAG_000316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HFC3979711.1"
                     /translation="MMLKKFVLGGIAALVLAACGGSEGGSGASSAPAQSAISGSLIER
                     INNKGTVTVGTEGTYAPFTYHDKDGKLTGYDVEVTRAVAEKLGVKVEFKETQWDSMMA
                     GLKAGRFDVVANQVGLTSPERQATFDKSEPYSWSGAVLVAHNDSNIKSIADIKGVKTA
                     QSLTSNYGEKAKAAGAELVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPNAGV
                     KIVWSAPADEKVGSGLIVNKGNDEAVAKFSTAINELKADGTLKKLGEQFFGKDISVQ"
     gene            33489..34397
                     /locus_tag="ACFJAG_000317"
     CDS             33489..34397
                     /locus_tag="ACFJAG_000317"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Dyp-type peroxidase"
                     /protein_id="HFC3979712.1"
                     /translation="MNTPQSAIIPDHAQAGIFIEADFAANRLNDIKAACRASLDALSA
                     LKARFPDDILGLTIAFGSKAWATFGHTDEGSEIKPFPEMGNGLAPSTQHDMSIHIQSF
                     RQNAAYALAQSVLGAFGDSICVASEEHGLRLYQDRGLDGFVDGTENPQGDETIREVAI
                     IPEGLPDAGGSYVLLQKYLHDLKKWDAVPVAEQEASVGRSKETDDEFSRDVRLPDSHL
                     GRVNLKENGVGLKIVRRSLPFGKISGEHGLMFTAYCRTLHNIEAQLLSMFGDTDGKTD
                     LLLRHLSAAVSGGYYYAPSVERLQNL"
     gene            34474..38076
                     /gene="recB"
                     /locus_tag="ACFJAG_000318"
     CDS             34474..38076
                     /gene="recB"
                     /locus_tag="ACFJAG_000318"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009338 - exodeoxyribonuclease V complex
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008854 - exodeoxyribonuclease V activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit beta"
                     /protein_id="HFC3979713.1"
                     /translation="MSAPIRAFDPLTAPISGTNLIEASAGTGKTYGIAALFTRLIVLE
                     QKSVERVLVVTFTKAATAELKTRLRARLDDVLQVLESKEIAELGDDTLSDGIAAYCAE
                     HHEGDTFLPALLEQALQKESRTRLIVRLKAAIGQFDNAAIYTIHGFCQRILRDYAFLC
                     QAPFDVELTEEDGDRLLVPAQDFWRERVSGDPVLAALAFKRKAVPQTVLAQIRAYLSR
                     PYLNFRRPQADLKQAQRDAETSWQTVCRLLPELEAGFWRIHPDLNGNSYRKNSFGNLF
                     KELAQKSAAGQLPCLDKDTHERLLKLSSDKLEAGLKKGKTPDAAVFAELQKLADFGRD
                     LNALEEAEETTMIRLQLDLIEYLNSSLAEMKKSRRERGFDDLLLDVHTALTDNPHAET
                     PARAVAENWEIALIDEFQDTDPLQYEIFQKIFIARNRPLFLVGDPKQAIYSFRGADIY
                     AYLQAAEDARHRYTLATNYRSHAALIGSIGALFRLKERPFVLENIGYSEVGAARAESR
                     LSPKRPAVQLRWLHENDNEKANKDVLRRRAADYCADEIARALNEASGGRLNFKGRPLQ
                     SGDIAVLVRTHNEAVMISAALKKRQVQSVLLSRESVFASPEAAALSALIGFWLEPRRA
                     GTLRFVLTSGIFGYDAQQLHDFNQNESEILHWAESARTALDIWQKYGIFAAMQQFSQT
                     HGIETRLLSRNNGRSLTNYFQLLELLAAEDAQNRNPAALHKWLRDQISLAGNNGGDNR
                     AIRLESDEDLVKIVTMHASKGLQYPLVYCPFAWDAQDTGPSDWQILHQGANRAELLAK
                     AQLSESEQKQYADEEMAERLRLLYVALTRAEEQLNIYAAYSSDTADNPLAYLIEGLPQ
                     DSRETVRRTYACEKDGITMLKRNWRRVADNAPAGTDFAFTEDAPPPAAYRGNADQAAE
                     FAANSIPERGFRFVRHTSFTALSRHTQTPDGGEEDACPSLDAAETSVPAMPSETPTAS
                     DGISIHDFPKGTQAGLCLHEILEDFKFGQAAAEQETLIADKLKKYGFEEIWLPAVAEM
                     AEACRKTPLTGAYGLSDIPPGCRRPEMGFTLHTEDFGLKRLRDWLARDDIRLPEVCRA
                     AAETLDFHTVNGFLNGFIDMVCQDPDGNICIIDYKSNHLSAYTRQAMDEAVAHQHYYL
                     QALIYAVAAARYFKLRGQPPAAVSVRYLFLRGLDGKGGGVWRWDIDAAALEQIK"
     gene            38115..38474
                     /locus_tag="ACFJAG_000319"
     CDS             38115..38474
                     /locus_tag="ACFJAG_000319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HFC3979714.1"
                     /translation="MNIKQLITAALIASAAFATQAAPQKPVSAAQTAQHSAVWIDVRS
                     EQEFSEGHLHNAVNIPVDQIVRRIYEAAPDKDTPVNLYCRSGRRAEAALQELKKAGYT
                     NVANHGGYEDLLKKGMK"
     gene            38599..39078
                     /locus_tag="ACFJAG_000320"
     CDS             38599..39078
                     /locus_tag="ACFJAG_000320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF302 domain-containing protein"
                     /protein_id="HFC3979715.1"
                     /translation="MKHILPLIAASALCISTASAHPADKPPTQNETAMTTHTLTSKYS
                     FDETVSRLETAIKSKGMDIFAVIDHQEAARRNGLTMQPAKVIVFGTPKAGTPLMVKDP
                     AFALQLPLRVLVTETDGKVRTAYTDTRALIVGSRISFDEVANTLANAEKLIQKTVGE"
     gene            complement(39353..40732)
                     /gene="radA"
                     /locus_tag="ACFJAG_000321"
     CDS             complement(39353..40732)
                     /gene="radA"
                     /locus_tag="ACFJAG_000321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HFC3979716.1"
                     /translation="MAKTLKTLYQCTECGGTSPKWQGKCPHCGEWNTLQESFAAPEPK
                     NARFQSWAADTSTVQSLSAVTAAEVPRNPTGMGELDRVLGGGLVDGAVILLGGDPGIG
                     KSTLLLQTIAKMAQSRKVLYVSGEESAQQVALRSQRLELHAEGVNLLAEIRMEAIQAA
                     LKQHQPEVVVIDSIQTMYSDQITSAPGSVSQVRECAAQLTRMAKQMGIAMILVGHVTK
                     DGAIAGPRVLEHMVDTVLYFEGDQHSNYRMIRAIKNRFGAANELGVFAMTENGLKGVS
                     NPSAIFLASYRDDTPGSCVLVTQEGSRPLLVEIQALVDDAHGFTPKRLSVGLEQNRLA
                     MLLAVLNRHGGIACFDQDVFLNAVGGVKIGEPAADLAVILAMLSSFRNRPMPEKTVVF
                     GEIGLSGEVRPVARGQERLKEAEKLGFKRAIVPKANMPRNAKEFPNLKIHGVSSLQEA
                     IDICRDSRE"
BASE COUNT         9450 a        11831 c        10499 g         9161 t
ORIGIN      
        1 atttttatgc gaaaatggtt tatcgtaata ttcgaattca ataatacctc ttgatttaac
       61 gataatagaa ggctctctat ggatatcctt atcaggaaca tcatcaaagt caactaatgc
      121 aaaagttttt cctcctgcaa aaatctttaa cggcgcatta tctttatgca tttctttcat
      181 ttgtccagca gttatcttag ttccttttgt acgaactaaa acctccccca atggcttcca
      241 ctccaccggt gccgtctgaa tcatctcaat caattttttc gctttgcttt gcatatccat
      301 ggttgttttc cgtttccttc ccgctgcggc gggatgtggg gcggttgcgg ggcgggtttc
      361 ggctcactct gtccgtttgc cgttgtttct gcgggctgaa acccgtcctg ctttcaggct
      421 gcctgaaatc gtgtgcaggc tgctttttca ggtagcctga atgcggttat tttttgccgt
      481 tttgatgctg ttcggttgcg gcaagccttt tctgttcttc gttctcaagc tgtttgatgc
      541 ttttctcggg tacgggctgg ttttcaggca tgatgccgcc cagttcttca atggtttggc
      601 gcactttttg tccgacttcg aaatgcaccc ggtttgcctg tgttttgcct tggatgtttt
      661 tgcggcgtag tttttcttcg gtttgcgtgg cgcgaaacag attggcagcc ggttcgctgg
      721 cgttcatgtg gtctaggatt ctctggcttt tcttcaagcc tttgcggctg tgtatgccct
      781 gcttgtccag tcctccgtat agcccccgat agccgtggtt ttggaagacg gcgtactcaa
      841 cgggtttttc tacgcctgca tccttggctg cggcggcaag gtcggtattg tgttcgcgca
      901 gctgcctgcg aagcagcagg cgttgtttgt cttcgcccaa actcctgaat gctgcctcgt
      961 cttgcagctc ttggcggcgg gcttgcacgg caaagtaggt ttgccctgcg gcaatgacgc
     1021 ttttggacgg atcgccgttt tgcacaatca ggtagcaggc atagcgggaa aggcggtaat
     1081 ccgccacttc gcgctgcccg cctttcccaa gggctatcat tttgttggtt tcaacaaaat
     1141 gatgattttt gtcatttcct gatgtttcgc aagcggttat ggctttatca atggcccgtt
     1201 ggaaattgcg ccattcggaa tattccaaga tttgctgcaa ggtgcgcgcc gaccaatatt
     1261 cattgcctgt ttcgtcgatg tgtttggcgt tttcaaaagc gttattttct gttgtcatgt
     1321 attttccccg aaaatttctt gatttgaact tgtaaggatt gcttacaggt tgccgcccgt
     1381 attttcagac ggcctctttc ccattcagtt gttgcaaaat atgcaacaac tgcctaggtt
     1441 tcaatctctg caatcacttc gtcaatttca cgccgcagcc gttcgatttt ggcgacggtt
     1501 tcgctgattt cggcgttgag ctgtctgatg tcgatgacct cgcgggtgtc ttcggcttcg
     1561 acatagctgc tgacggcgag gttgtagccg ttgtctttga cggtttgctg ggcggcgttt
     1621 tgggcgatat gcggcacatc ggctttgtcg gcgaagagtt tgacgatttc ggcaatgtgt
     1681 tcttcggtta agacgttgtt gttggtttct tttttaaaga agccgcctgc atcgatgaat
     1741 tggatgtcgg tattgtcttt gtgtttggac aaaaccagga tattgacggc gatgcaggtg
     1801 ccgtaaaaga gattgggcgc aagggcaatc acggtttcca catagttgcc ctccaccaga
     1861 tattggcgga ttttctgctc tgcgccgccg caatagaaaa tgccggggaa tgagacgata
     1921 gcggcgcggc ctctgccgga aaggtagttc agtgcgtgca ggatgaaggc aaaatcggct
     1981 ttggatttcg gtgcgagtac gcctgcgggg gcaaagcggt cgtcgttgat caaggtgggg
     2041 tcgtcgctgc ctatccagtc gatggaatag ggcggattgg agacgacggc atcaaagggt
     2101 ttgctgtctt tgagtttggg gttggtcagc gtgtcgccca attcgatgtg gaatttgttg
     2161 taattgacgt tgtgcagaaa catattcatg cgggcgaggt tgtaggtggt gtggttgatt
     2221 tcctgcccga agaagccttc ttcgatgatg tgttcgtcaa actgtttttt cgcctgcaag
     2281 agcaggctgc ccgagccgca ggcggggtcg tagattttgt tgactttctc ctgcccgtgc
     2341 accgccagcc gcgcaatcag cttggagacg ctttgcgggg tgaaaaattc gccgccggat
     2401 ttgcctgcgt tggcggcgta gttggaaatc aggtattcgt aggcatcacc gaaaaggtcg
     2461 atgcggtggt cttcaaaatt gccgaaatcg agttccgcca cgcctttaag gacggcggca
     2521 aggcgtttgt ttttgtcggc aacggtgctg ccgagccggc tgctggtggt gtcgaagtcg
     2581 tcaaacaagc ctttgatgcc ttgttcggtt gttcggacgg gtagccggag gcggagcttt
     2641 caatcgcggt aaagatttct ttcagcttgg tgttgagctc ttcgttttga tgggcttcgg
     2701 cggcaatatt gcaaaaaagc tggccggggt agatgaaata gcctttgact ttgacggcat
     2761 cgtctttgat ttcgggcgtg atgatgctgt ccggcatagc ggcgtaatca atgctgctgt
     2821 cgccggcctg catatagtcg gtgaagtttt cgctgataaa gcggtagaaa agtgtgccga
     2881 gaacgtattg tttaaagtcc cagccatcca ccgcgccgcg tacttcgtcg gcgattttcc
     2941 aaatttggcg gtgcagttgg gcgcgttgtt gcatttcggt catcatcgaa atccatatat
     3001 aaagttaaac aaatcaaaat cgcctgatat tttcagacga tttttttacg ggcattcaaa
     3061 ttaagccaaa ttttccagca tccatttgac gtagcggttg acacctgctt tgacatcgaa
     3121 aaattcttcc ttatatccgg cttcgcgcaa tttggtgatg tcggcttggg tgaagccctg
     3181 gtatttgcct ttgagcgcgt cgggaaaggg gatatagcgg ataagttctt cttctaccaa
     3241 ctctttcaag ctcaattcag atttgccttc ggcggcgcgg caggcgttga cggcggcggc
     3301 ggcgagttcg ttgaactgtt ggctgcggcc ggtgccgagg ttgtagatgc cggaaagttc
     3361 gggatggtcg aagaagtaga ggttgatttt ggcgacgtct tcgacgctga cgaagtcgcg
     3421 ggtttgttcg ccgttgccgt agccgtcgtt gctgccgaac aggttgacgt aaccgtgttc
     3481 gcggtattgg tggaaatggt ggaaggcgac ggatgccatg cggcctttgt gttgttcgtg
     3541 ttgtccgtaa acgttgaagt agcggaagcc gacgacttgg gcggtgagac cttctttcat
     3601 gcggcggcgc aatacttggt caaacaggaa tttggagtag ccgtacacat taagcggttt
     3661 ttcgagttcg cgctcttcgc ggaagatttc gcctttgccg taaaccgccg cactggaggc
     3721 ataaaggaag gggatgcgtt cgtcctgaca ccagtccaac aaatccagcg tgtactggta
     3781 gttgttttcc atcatataca aaccgtcgtg gttcatcgta tcggaacacg cgccttgatg
     3841 gaaaacggct tcgatgtttt gataaggtaa aatgtgttcc ctcacttggc ggataaattc
     3901 gtgtttgtcg aggtagtggg cgatttcgca ctcggcaagg tttttgaatt tttcgccttt
     3961 tgtcagatta tcgacggcga cgatgtcggt aatgccgcgt tggttgaggg ctttgacgat
     4021 gttgctgccg ataaagccgg ccgcgcctgt tacgatgatg gtcatattcg gtttcctttg
     4081 ttttgagggt ttcagacggc attggatggt catgccgtct gaaaagattt attgcccgtc
     4141 cagtgcttca accaactctg caaacgagca aaccgccgta ccgagtttcg ccacgacaac
     4201 cccggccgca gtattggcaa ggtacatggc ttcgggcatg gtgcagcctg ccgccagccc
     4261 caagcccatt ccggcaatga cggtgtcgcc tgcgccggac acgtcgtaaa cttcttgggc
     4321 gcgggtgggc tggtaaatgg gttcgccttc gctgaacaag gtcatgccct cttcgctccg
     4381 ggtcagcaaa acggcggtca agtcgaggtg gcggcgcagg ttttgcgctt tttcggtcag
     4441 atcgccttcg tttttccaac tgccgaccac ttctttcaat tcggcgcagt tgggcgtaat
     4501 cagagttgcg ccgacatatt tttcgtaatc gtcgcctttg gggtcgatta agacggtttt
     4561 gccgacatgt ttcgcccaat cgatcatatc ggagatatgc gacagaccgc ctttgccgta
     4621 gtccgaaaaa atgattgcgt cgtattcggg caagatttca cggtatttcc gcttgatttg
     4681 ttccaacact tcgcggttgg gatgttcttc aaaatcaagg cggataagct gctggttgcg
     4741 ggcgacgacg cgcagtttga cggtggtggc gatttgtttg tcgcgcatca gataggaggc
     4801 gacgccgtcc tgcaccatca gcgcgtcgag cgcggcggcg gcttcgtcgt cgccggttac
     4861 ggacaacagc cctgccctgc cgcccaacga agcgatgttg cgcgcaacgt tcgccgcgcc
     4921 gcccgcccgt tggtcgattc gtccgatttt tgccaccggc acgggtgctt cgggcgaaat
     4981 tcgggacacg tcgccaaacc aatagcggtc gagcatcacg tcgccgacaa caagaacttt
     5041 ggcttgtgcg aaacgggatt tgagggtttc ttgttggaac ttggcgggca tattgcctcc
     5101 gttgtgtttt gttcagacaa ccttaacctg taagaccgcc tgaaaatcag tttgcttcaa
     5161 ggtttgccac gcggttcact tcgcgcaata cggcgaccgg atcggcggct cgggtaacgg
     5221 ggcggcccat caccagataa gtcgaacccg ccgccaaggc ttcggcgggt gtcataatgc
     5281 ggcgttggtc gtcgttgttg ccggcaacgt ccaagcggat acccggtgta accaagacaa
     5341 aatcccgtcc caattcgcgg cgcagcggcg cggcttcttg ggcggaacag accacgccgt
     5401 ccaagcccga actttgtgcc agttttgcca aacggatgac ttgttcttca ggggcggtgt
     5461 tcaaaccgat ttccgccaaa tcgctttgct ccatgctggt caacacggtt acgccgatta
     5521 agagcggttt cgtgccgtat ccggcaacgg cttcggcggc ggcttccatc atacgtctgc
     5581 cgcccgacgc gtgcatatcg accatccaca cgcccatatc ggcggcgact ttacacgcct
     5641 gcgcgacggt gtggggaata tcgtggtatt tcaaatcaag aaagagtttg aaaccctgat
     5701 gaatcaggct ttctgccaaa ctgcgccccg tcgcggtaaa cagctctttg ccgattttga
     5761 tttggcacaa cgccggatca aggttgcgga cgaatccgag cgtgtctttt tcgttggcaa
     5821 aatcaagggc aacgatgacg ggggtacgtt gttgcggagt ttggaagtcg gtgattaaag
     5881 gattcatggt gttttcgttt cgggttttca gacaaccttt atcgtctttt tcgcagtata
     5941 gcggattaac aaaaaccggt acgtcgttgc cccgccccgg ctcaaaggga acgattccct
     6001 aaggcgccca agcaccaggc gaaccggttc cgtactatcc gtactgtctg cggcccgccg
     6061 ccttgtcctg atttttgtta atccgctata acaacgtaaa ttcaaaccgt aggccgggca
     6121 ttgatgtccg acctacgcgg actcaagccc ccgacaaact gtttcggata aatttgaacc
     6181 ggtacatcag ccgtcattcc cgcgcgggcg ggaatccatt gataaaactc agtttatcag
     6241 atttaaacag cgattgccca aattcagaaa tggattcccg cctgcgcggg aatgacgccg
     6301 aatgattatt tttcggttgc aacacgctgt ttatcaaaaa caggtcgtct gaaaacctga
     6361 ttttctgttt tcagagtgcg aagcctgccc gtgggtacga ccttttcgat ttatttgccc
     6421 aatgcgccca atacttcggc tttcacagct tctactgctt gggtaccgtc gactttgatg
     6481 tatttcggcg cgtgttcgcc ttccagcttg ctgtaaaaat caaccaaaac ttcggtttgc
     6541 tcgtggtaaa cggcaagacg ttttttcacg gtttcttctt tgtcgtcgtc gcgctgaatc
     6601 aaatcttcgc cggttacgtc gtctttgcct tcggttttag gcggattgta ggtaacgtgg
     6661 taagtacggc cggaagccaa atgcacgcgg cggccgctca tgcggtcgac aatcacgctg
     6721 tcggatacgt cgatttcaac gaccgcgtcc aaacccacgc ctgcttccac catcgcttcg
     6781 gcttgcgcca atgtacgcgg gaaaccgtcg aacaggaaac cgtttttgca gtcgtcttgc
     6841 gcgatgcgtt ctttgaccat gccgataatg atgtcgtcgc gcaccaaacc gccttcatcg
     6901 atgatttttt tcgcttccaa acccaagggc gtgcctgcct taatcgcggc acggagcatg
     6961 tcgccggtag agatttgcgg aatgccgaac gcggcggtga tgaattgcgc ctgagtgcct
     7021 ttgcccgcgc ccggtgcgcc taaaagtaat gctttcatga agtgatcctt ttaaatgtgt
     7081 ttattggaat caaacagatg gtttacgatt ctacacggct tggcgcaata gttcaaaaac
     7141 caactgcaca aactgccatt tgcaagcaaa tgttttgcat acctttgccg agcctgatat
     7201 tcacaaggcg gcaacttttt gggacaatcc ccaaagtttc aaaacatcac accctaccaa
     7261 aaaggaacat ccgtgaaacg catttttctg tttttggcta ccaatatcgc tgttttggtc
     7321 gtaatcaaca ttgttttggc ggttctgggc atcaacagcc ggggcggcgc gggcagcctg
     7381 ttggcgtatt ccgccgtcgt cggcttcact ggttcgatta tttcgctgct gatgtccaaa
     7441 tttatcgcca aacaatcggt cggtgcggaa gtcatcgaca cgccgcgcac cgaagaagaa
     7501 gcctggcttc tgaacactgt cgaagcccaa gcgcggcaat ggaacctgaa aacgccagaa
     7561 gtcgccatct accactcccc cgaacccaat gcctttgcca cgggcgcatc gagaaacagc
     7621 tccctgatcg ccgtcagcac cggtttgctc gaccatatga cgcgcgacga agtggaagcc
     7681 gtgttggcgc acgaaatggc gcacgtcggc aacggcgaca tggttacgct gacgctgatt
     7741 caaggcgtgg tcaatacctt tgtcgtgttc ctgtcgcgca ttattgccaa cctgattgcc
     7801 cgaaacaacg acggcagcca gtcccaggga acttatttcc tagtcagcat ggtattccaa
     7861 atcctgttcg gcttccttgc cagcctgatt gtcatgtggt tcagccgcca acgcgaatac
     7921 cgcgccgacg cgggcgcggc aaaactggtc ggcgcaccga aaatgatttc cgccctgcaa
     7981 aggcttaaag gcaacccggt cgatttgccc gaagaaatga acgcaatggg catcgccgga
     8041 gatacgcgcg actccctgct cagcacccac ccttcgctgg acaaccgaat cgcccgcctc
     8101 aaatcgcttt aaaccgattt gaaacgacaa aaaaccgtac gcacaagcag tacggttttt
     8161 tcgtatatgc cgactgaaaa catcaggttt ccataccggc accaaccgta tccatttccg
     8221 caccggatac gccgcattga tatatccccg acaaaccgtg tccggacaga aaatatcaga
     8281 taaaacagcg gtaaaaatgc cgtctgaaac caattagggc ttcagacggc atttttactg
     8341 caaaacctta tgcgaacgga tgatgcagca caatcgtttc ttcgcggtcg gggccggtgg
     8401 agacgatggc gaccggcgcg ccgcagactt cttcaatccg tttcaaatat gctttggcat
     8461 tggcaggcaa tgcgtcgtag cttttcacgc cgacagtcga ttcgcgccag ccgggcatgg
     8521 tttcgtaaat cggtttgcag gtttccaccg catccgaacc gcaaggcagg atgtcggttt
     8581 tgccgccgcc tggcaattcg tagccgacgc agatattgat ggtttcaacg ccgtccatta
     8641 catcgagttt ggtaatgcac ataccggaaa tgccgttgat ttggatggag cgtttcaggg
     8701 cggcggcatc aaaccagccg cagcggcgcg cgcggccggt taccgaaccg aattcgtgtc
     8761 cgcgctccgc caaacctgcg cctacttcgt cgaacaattc ggtcgggaac ggacccgaac
     8821 cgacgcgcgt ggtataggct ttgacgatgc ccaaaacata atccagcatt tgaggaccta
     8881 cgcccgcgcc tgccgaagcc gcgccggcga gacagttgga cgaggtaacg aaggggtaag
     8941 tgccgtagtc gatgtccaac aacgcacctt gcgcgccttc aaacagcagt ttttcgccgt
     9001 ttttgttttt ttcgttcaac acgcgggaca cgtcggcaat catcggcgca atgcgcggcg
     9061 cgactttttc gataaccgcc atcacgtctt ccgctttaac tggtccggcg ttgtgcaggt
     9121 attggagttg gacgttgtaa taggcaagga cggcatccag tttttcacgc agtttttcag
     9181 gatgcagcaa atcggcggcg cgaatggcgc ggcgtgccac tttgtcttcg taggcagggc
     9241 cgatgccgcg gccggtcgtg ccgattttgc ctttgccgcg cgatgcttcg cgggcttggt
     9301 cgagcgcgat gtggtaaggc aggatcagcg ggcaggtcgg cgcgattttc agacggcctt
     9361 cgacgttttt cacgcctgcc gcgttcaact cgtcaatttc gcccaacagg gcttcggggg
     9421 aaacgacaac gcccgaaccg atgaagcaat ccaatccttc gtgcaggata ccgctcggaa
     9481 tcaggcgcaa aatggttttt ttgccgccga cgaccaaggt atggcccgca ttgtggccgc
     9541 cttggaagcg cacgacgccg ccggcttctt ccgccagcca gtcaacgatt ttacctttac
     9601 cctcgtcgcc ccactgtgcg ccgattacta caacattttt agccatagcc atataaccta
     9661 tcgatattaa aaattattgc ggaaaatccc caaaccggtg cggctttgcg ccccgccccg
     9721 gtttgccttt catccgctat gaacgggtat ttagcgtttc acgatctgcc aaacgccgtc
     9781 cgtctttttc agacggcctg caagctcttc cgaaacattg tgtccgatac cgtagtcaat
     9841 cacgacacac tgcccttgtt cacgcaaggc ttcgaccgct tcgcgcgccg cttctgcatc
     9901 ttccgcatcg accaacacgg cgggctgccg ttcgacggcg ggcaaacgcc cgataaagct
     9961 gcgtaagtcg aaactgaatc ccgttgccgg gcgcgccctg ccgaaatatc cgcccaatcc
    10021 gtcataacgc ccgccgcgcg cgaccgcgtc gtggaaatcg gcggcatagg cggcatacag
    10081 caagcccgtg tggtaattgt cgacgcgcag ctcggacaag tcgatatgga tttcattatc
    10141 ggggaatgcg tcgcacaccg cctgcaattc gtccaacgcg ccgccgaccg ccgacaaatc
    10201 cggcaaccgt ccgcgcgcgt cggacaacac ttcacgcccg ccgtacaggc gcggcagcaa
    10261 cgagaatgct tttgcccaca taccgtccag cttccaagcc ttgacctgcg cttcgaccga
    10321 cccggtatct ttatcctgca tcaaggcaag cagcgttgcg gactgccccg catccaaatg
    10381 cgccgcatcg gacaaggcgc ggaatatgcc gatatgcccc agcgaaagca gcactttgcc
    10441 catatcggca attttcatgc ttttcagcat aaggtctatc agctcgatgt cgccacggat
    10501 gtcggcaaaa ccgtacattt ccgcccctgc ctgcaagggt tcgcgcatat tcggcagacc
    10561 gtcgggctgc gcgtgcaaca ccggaccggc ataacacaac cggttaatcc cttggttggc
    10621 ggacaaaaga tgggcatcga tacgcgccac ctgcggcgtg atgtcggcgc gtatgcccaa
    10681 ctgcctgccg ctgagcctgt ccgttaccaa aatggttttc agtgaaagcc ccgcatcgat
    10741 atgcgtcagc agggaatgtg cgtactccat cagcggaggc tgtaccagtt cataaccgtg
    10801 tacgcggaac agtgccaaca actgctcgcg cgcgctttca agctgccgcg cgttcgtggg
    10861 cagtacgtcg gcgatatgtt ccggaagctg ccatgtctgc atgagaatct gccttctgtt
    10921 ttatcctgta aacacaaaag actgcccgat ccgcaatcag acggcatctt tgccgcaacg
    10981 catcacgccg ctgtcaaaac ggcgatgctt ccttccgatt cagaatccga acagcccctg
    11041 tccgacggct caatgccgtc aagtcgttaa aaccaaactt taccataaaa tacacacaat
    11101 ctgaatatac ttttataccc cgtatccgcc gtctgacggc acggtatttt ttactatata
    11161 atgtgcacca ttatttctca tcacttcccg ctgccgtttt tttgtttcag acggcatttt
    11221 tattgactga acacttatgc tgctcgacct cgaccgcttt tccttttccg tcttcctgaa
    11281 agaaatccgc ctgctgaccg cccttgccct gcccatgctg ttggcgcagg tcgcgcaggt
    11341 gggcatcggt ttcgtcgata ccgtgatggc gggcggtgcg ggcaaggaag atttggcggc
    11401 ggtggctttg ggcagcagcg cgtttgccac ggtttatatt acctttatgg gcattatggc
    11461 ggcgctgaac ccgatgattg cccagcttta cggcgcgggt aaaaccggtg aagcaggcga
    11521 aacggggcgg caggggattt ggttcgggct gattttgggg attttcggca tgattttgat
    11581 gtgggcggcg attacgccgt tccgcaactg gctgactttg agcgattatg tggaaggcac
    11641 aatggcgcag tatatgctgt tcaccagctt ggcgatgccg gcggcaatgg tacaccgcgc
    11701 actgcacgcc tacgcttcca gcctgaaccg cccgcgcctg attatgttgg tcagctttgc
    11761 ggcgtttgtg ttgaacgtgc cgctgaacta tattttcgtt tacggcaaat tcggtatgcc
    11821 cgctttgggt ggcgcaggtt gcggcgtggc gacaatggcg gtgttttggt tcagcgcgct
    11881 ggcattgtgg atttatatcg ccaaggaaaa attcttccgc ccgttcggac tgacagcgaa
    11941 attcggcaaa ccggattggg cggtgttcaa acagatttgg aaaatcggcg cgcccatcgg
    12001 gctgtcttat tttttggaag ccagcgcgtt ttcgtttatc gtgtttttga ttgcgccttt
    12061 cggcgaggat tatgtggcgg cgcagcaggt cggcatcagt ttgtcgggga ttctctatat
    12121 gattccgcaa agcgtcggct cggcagggac ggtgcgcatc ggcttttcgc ttgggcggcg
    12181 cgaattttcg cgggcgcgtt atatttcagg agtgtcgctg gtgtcgggct gggtgctcgc
    12241 cgtgattacc gtgctttcct tggtattatt ccgttcgccg ctggcaagca tgtacaacga
    12301 tgatccggca gttttaagca ttgcctccac cgtcctgctg ttcgccggcc tgttccaacc
    12361 ggcagacttc acccaatgta tcgcgtccta tgccctgcgc ggttacaaag tcaccaaggt
    12421 gccgatgttc atccacgccg ccgccttctg gggctgcggc ctgctgccgg gctatctgct
    12481 cgcctaccgt ttcgatatgg gcatttacgg cttctggacg gcattgattg cctcgctcac
    12541 catcgcagcc gtcgccttgg tgtggtgctt ggaaaaatac agtatggagt tggtcaaatc
    12601 acacaaggcc gtctgaaaac gcagcacact tcaattcaaa tacagttaaa gctcaaacca
    12661 tgcaacccat ccgataccga accgacctca ccccctacaa cactttcggc ctgcacgccc
    12721 aagcccgggc ctttatcgcg cttaaacacg ccgacgaatt gcgcgacatc gtccgactgc
    12781 ccgagttcga ccgcgatact gttttatggc tgggcggcgg cagcaacatc cttttgatgc
    12841 aggattacga cggcttggtc gtccatatgg aaaacaaggg catacgcgag attgcgcgct
    12901 cagacggcat ggttctgatt gaagcgcagg cgggcgaaat ttggcacgat ttcgtgttgc
    12961 acaccgtcgc gctgggtttg agcggtttgg aaaacctgag cctgattccg ggtacggtcg
    13021 gcgcgtcgcc cgtgcagaac atcggcgcat acggcgtgga ggcgaaagat gtgattcaca
    13081 gcgtgcgctg cttcgatttg gatacggaaa cctttgtaac cctttccaat gccgactgcc
    13141 gcttcgccta ccgcgaaagc ctgttcaagc aggaaggcaa agggcgttat gtgattgttt
    13201 cggtcgtatt tgcattaaaa acgcattttg tgccgaactt gggctacggc gatttggcgg
    13261 cgaaggttgc cgaattgagt gcaggtaggg aggcaacggc gaaagacgtt tccgatgcgg
    13321 tatccgccat ccgcaacagc aaattacccg acccgaaagt tttgggcaat gtcggcagtt
    13381 tctttaaaaa ccccgtcgtc agcgcggaaa aagccgccac cctgttgcag cggcatcccg
    13441 atatgccgcg ctatccgcag cccgacggtt cggtcaaact cgccgccggc tggctgatcg
    13501 accaatgccg tctgaagggc ttccaaatcg gcggtgcggc ggtacacgat aaacaggcat
    13561 tggttttggt aaacaaaaac aacgcctcgg caaacgatgt ccggcagttg gcgcaacaca
    13621 tcaaatttac agtatttgct cggtttcagg tagaattaca cgccgaaccc aattggctgc
    13681 ccgcttcgtt cagcctgtaa atccaaggag tatgcccgtg acccgcattg caaaaaccaa
    13741 tacttacacc cgcatcatcg acgccagcct tgcgcttttc aacgaggaag gcgagcgcaa
    13801 catcagcacc aaccatattg ccgcccactt gggcatcagt ccgggcaatc tctattacca
    13861 cttccgcaac aaagacgaaa tcatcgtcca actgttcaaa cgttacagcg aagccctgct
    13921 ggaatacctc aacgaagccg tgttgccctc tgatgtggaa gactctatca actatatggc
    13981 aggcatttac gatgtcatgt gggaataccg cttcctcttt agcgacgtaa acaccctgct
    14041 tgcgcgcagt gccgaattgt tgggcgaaca caataccttt acccaagcca aagtctcgcc
    14101 gcttctagtc aaactgctga cccagctcaa cgggctgaac gtcatcaacg ccgaccaaac
    14161 cgctatgaac gacctcgccg tcaatatgtg gatggttacg aaatactggt tcgacttcga
    14221 cagttccctg cgcggccgta ccaagctgac cgaagactcc aaagcacgcg gcgtccgtcg
    14281 taccttaagc ctccttcgcc cctatctttt gcccgaacac cgcgcggaat acgaccgcaa
    14341 aatcggcaac ggcaacccgt aaacccataa cgtccgaatc agccttcaga cggcacttac
    14401 ccgacggtat cagcgaatgc gcgcagtccc cccgccccat atctccatca caggcctagg
    14461 ttacctcggc ctgccgctgg cacaaaagtt ttaccgacac ggcagccgcg tcgccgccat
    14521 aaaacgcagc ctgacttcgg acgacatcaa cctgcccata cacctcgaca ccttcgacct
    14581 caaccgtacc gatgcctttc agacggcatt gtggcggcat cacgccgaca aacccgtctg
    14641 gttcttcctg ctgccgccct cctttttggc gcattacgcc gacaccgtca aacaatgggc
    14701 agagcttgcc cgggcgtgca acgtgcaaca cctgattttc acaagcagca caagcgttta
    14761 cggcgataaa gcgcgagaat gcgacgaaac cgccgcaccc gatccgcaaa ccgagtccgc
    14821 ccgacaaatc cttgccgccg aacaacacct gctcgacaac ggcgttccga acatcgacat
    14881 cctgcggctg ggcgggcttt attgcgccga acgccatccc gtcagccgcc tcgtgcaaaa
    14941 gcaaaacatc caaggcggca accggcctgt caatatcgtc caccgcgaca tcgccgtcga
    15001 aaacctgttt cagacggcat ccaaccccgg cggcaggcgg ctgaaaaaca ttatcgaacc
    15061 gcgccacccg acacgccgcg aattttatac ggaagaagcc gccaaactcg gcctgcccgc
    15121 gccggatttc tcacccgacg acagcgtggg caaaatcatc cgtaccgttt gcgataacgg
    15181 cttaagcctg taaaataagc ggcaacagca acaacaggca ttctccgccc caatcagaaa
    15241 atatgtccgc cctcctcccc atcatcaacc gcctgattct gcaaagcccg gacagccgct
    15301 cggaacttac ctcctttgca ggcaaaacac tgaccctgaa cattgccggg ctgaaactgg
    15361 cgggacgcat cacagaagac ggtttgctct cggcgggaaa cggctttgca gacaccgaaa
    15421 ttaccttccg caacagcgcg atacagaaaa tcctccaagg cggcgaaccc ggggctggcg
    15481 acatcaggct cgaaggcgac ctcatcctcg gcatcgcggt actgtccctg ctcggcagcc
    15541 tgcgttcccg cgcatcggac gaattggcac ggattttcgg cacgcaggca ggcatcggca
    15601 gccgtgccac cgacatcgga cacggcatca aacaaatcgg caggaacatc gccgaacaaa
    15661 tcggcggatt ttcccgcgaa cccgagtccg caaacaccgg caacgaagcc cttgccgact
    15721 gcctcgacga aataagcaga ctgcgcgacg gcgtggaacg cctcaacgaa cgcctcgaca
    15781 ggctcgaacg cgacatttgg atagactaac cttcagacgg catccgacat gaacagccct
    15841 tttcacaaca tcggtatcgt aacccgcccc aacacgcccg acatccaaga taccgcacac
    15901 acgctgatta cctttttgaa gcagcacggc tttaccgtct atctcgacga agtcggcgta
    15961 agggaatgct gcatctatac ccaagacacc gacggctgcc atatcgtcaa caagaccgaa
    16021 ctggggcaat actgcgacct ggtcgccgtc ttaggcggag acggcacctt tctctctgcc
    16081 gcccgcgaaa tcaccccccg cgccgttccg attatcggca tcaaccaagg tcatttgggc
    16141 tttcttaccc aaattccccg cgaatatatg acggacaagc tattgcccgt tttagaagga
    16201 aaataccttg ccgaagagcg catcctgatt gaagccgcac tgatccgcga aggcaaaacc
    16261 gccgaacgcg ccctcgccct caacgatgcc gtcctctccc gcggcggtgc cggacagatg
    16321 attgaatttg aagtcttcgt caatcaggaa ttcgtctata cacaacgttc ggacgggctg
    16381 attgtctcca cccccaccgg atcgaccgcc tattcgcttg ccgccggcgg cccaatcatg
    16441 caggcaggat tacacgcctt cacgctcgtc cccatctgcc cgcaatctat gactaaccgc
    16501 cccatcgcca ttccagacac gtccgaaatc gaaatcctcg ttacccaagg cggcgacgcg
    16561 cgcgttcatt tcgacggaca atccttcatc gacgtgcaaa acctcgaccg catcatcatc
    16621 cgccgctacc acaatccctt acgcatccta cacccgaccg actaccaata tttcaaaacc
    16681 ctgcgccaaa aactgcactg gggcgagcaa ttagtctaag ccggccttca cccgaaagta
    16741 cccatgaatt ccaaaatttc ctccgaccat acagaagata ccatacacct ctccaaacgt
    16801 atggcacaac tggggctttg ttcgcgccgc gaagccgacg gccatatcga acagggctgg
    16861 gtaacggtca acggcaaaac cgccgtactc ggtcagaaag tttcaccggc agaccgtatc
    16921 gaactgaaca agaaagccca cgaacagcag gcggcacgca ttaccatcct gctgaacaaa
    16981 cccgtcggct atgtcagcgc acaagcggaa aaaggctata aatccgccgc cgaactgatt
    17041 acccctgaaa attgctggga aggcgacacc agccgcatca gtttcgatcc gaaacacaaa
    17101 atcggtcttg cccccgccgg caggctcgat atcgattcag tcggattgct ggtgttgacg
    17161 caagacggcc gtatcgccaa gcagcttatc ggcgaaaaca gcggcagtga aaaagaatat
    17221 ttggtgcgcg tgcgcggcaa attggacgaa aaaggacttg ccttactgaa tcacggattg
    17281 agtttggacg gtgataaact gcgtcccgcc aaagtagaat ggcaaaatga agaccaactg
    17341 cgcttcgtgt tgaaacaggg taaaaagcgg caaatccgcc gtatgtgcga actggtcgga
    17401 ctgcgcgtcg tcgggctgaa acgcatccgc atgggcaagg tcaaactcgg caggctgccg
    17461 cccggcaaat ggcgttatct cgctcccggc gaatcgtttt aaataagcat taaaaaatgc
    17521 cgtctgaaaa tccttgcgtt ttcagacggc actgccttat gcccaaataa cggtttcttc
    17581 caagggcctg cgcgctttcg tgacgatttc ctgaacccgg tagccgaatg tcgcggcaac
    17641 ggacacgccc cattctgccg catcgaacaa accgaactgc ccggacaata cgcgttccat
    17701 atcggcatag ttgaaacctt ccaccgggca ggaatcgata cccgccatcg ccgcacccgt
    17761 catcatgttg gctaacgcga tataggtctg gcggcagcac cagtcaaaca aggcgcgcga
    17821 atcgtccaaa atcttgatgt cgtcagcttg aaacgcctga tacctcgcca aagatttttc
    17881 tacggcatcc ggttcggtaa cgccgcgccg tttgagactt tccaacataa acgggctgtc
    17941 gaagcgggca tttttcttcg ccaaaaacac caccaaatga ctggcggtat ccaaagcatc
    18001 cgccataccc caagaaaaca gcttgattgc ctgtcggatt tcggggtttt gaaccacaac
    18061 aaactgccaa ggctccgaac cgaccgaact gggcgacaaa cgcccgagtt ctaaaataaa
    18121 ctgaaaatcc tcggcactga ttttacgtgc cgcatcgtaa tgccggcaca atttgcggtt
    18181 tttaaatgcg gatagaacct gctctttgct taatactgtc atcgtgcatc cttttattac
    18241 tttgattgca aattgatttc aaaccgatac ggcactgccg caccctataa gccgtccccg
    18301 ccatcaagct tcacccggat tttacccatc tctctacggc tgggaaaaca aagcggcggc
    18361 agattcggga ataactcccc aatgcctttc agacggcatt tggacatcgc aaacgcgcct
    18421 acgggtaggc gatataggca taagccgaat ggttgtggat agactcgaaa ttctcgctct
    18481 cgacgacgaa actcttgatg cgtttgtcgg caatcagcga agtagcgaca tcgcgcacca
    18541 tatcttccac gaatttcggg ttttcgtagg ccttttcggt aacgtatttt tcatcggggc
    18601 gtttgagcag gccgtagagt tggcagctcg cctgcgtttc cacataatcg ataacttcct
    18661 cgataccgac ttcggcatcg gaagtcaggc tgacggtaac gtgcgaacgc tgattatgcg
    18721 cgccatattg ggaaatttct ttggaacacg ggcaaagcga ggttacggga atcatgacct
    18781 tcatactgtg gccgtatgcc ccgtctttca tttcacccgt gaggctgaca tcataatcca
    18841 gtaaggaccg gataccggat accggcgcgg ttttcttgcg gaaaaacgga aaagaaacgc
    18901 tgattttgcc ggcgcgggaa tccaaaagcg cgaccatttc ggcagtcagc ctatgcaatt
    18961 gtgcgaaatc caagacttcg gtatgttgct ccatcaatgc gacaaagcgc gacatatgcg
    19021 tccctttctg ctcggcgggc agataaaccg tcatcgtcag gcgagcaacc gtggattgtg
    19081 ttccttcggc ggttttcagg gtaatcggga agcgcaggtc tttaatgccg acctgattga
    19141 tcggcaggtt gcgcaaatct ctgctggatt gcacgtctgc aatggcgttc atgcgttgtt
    19201 tgtccttaat attcagataa ttattgagat gtgtgtattg tatggcaggc agatgccgtc
    19261 tgaaaaaacg ctgtcggccg cctgcctgca aatgcgagat tatatcactt gcttttggcg
    19321 gctgcattga ttgtttctat tttcgggata gtgataaaat cccgacttat ccatatctta
    19381 caaggcagaa acagatgaaa ttcccgaccc gtgccatcca ttccggctac gattgcgacg
    19441 aacacaaccg cgcgctgatg ccgccgattt atcaaaacag tatgtttgcg ctgcacgaaa
    19501 tcggcgaaaa tgtgccttac cgttattcgc gcctgagcaa cccgacccgt cagattttgg
    19561 aagacaccgt tgccgatttg gaacacggtg cggcaggttt tgcgttttcc agcggtatgg
    19621 cggggattga tgccgtgtgg cgtaccttcc tgcgcccggg cgataccatc gtcgcggtcg
    19681 ccgatattta cggcggcgca tatgacttat tggtcgatgt ttatcaaaaa tggggggtga
    19741 acgttgtttt tgccgatttg ggcaatcccg ataatttgga cgaattgctc aaagcgcaca
    19801 atgtcaaact ggtttggctg gaaatgccgt ccaatccgct tttacgcttg gtagacatca
    19861 aagcccttgc agcgaaagcc aaagcagccg acgcgctggt cggcatcgac aacacctttg
    19921 ccacgccgta tctgcaacag cccttggata tgggttgcga ttttgcattc cattccgcta
    19981 ccaaatattt gtgcggccat tccgacgtat tgatgggcat cgtcgttgcc aaaaccaaag
    20041 agctggctca gcctttgcac gatatgatgg tgcataccgg cgcgattgca ggcccgacgg
    20101 actgctggct ggtgttgcgc ggcatcaaaa cgcttgccct gcgtatggag gcacactgca
    20161 aaaacgcact cgaaattgcg cgccgtttgg aagcccatcc tgccattgaa aaagtgttcc
    20221 atcccggcct gccgtctcac gaacattacg cactcgccca agcgcaaatg cccaaaggca
    20281 tcggcggcgt ggttacggtt tatctcaaaa acgacacgcg cgaagcggca aacagcgtga
    20341 ttaaaaacat gaaactggtc aaaatgacct ccagcctcgg cggcgtggaa agtctggtca
    20401 accattgcta ttcccaatct cacagcggcg tgccgcataa tgtgaaaatg gaaatgggca
    20461 tcagggtcgg actcctgcgc ttctccatcg gtattgaaga cgtagatgat atttggaacg
    20521 atatttccgc cgcactcgat acaactttgt aaaccgtaaa aaatgccgtc tgaaaccata
    20581 gtttcagacg gcatttcaat attgcgaatc aaatatcaac gcttcagcat ctttgccgcc
    20641 tcaatggcgt aataggtcaa aatcccgtcc gcacccgcac gtttgaatgc cagcaggctt
    20701 tccaaaacca ctttgccgcc gtccagccag ccgttggcaa ccgccgcctg caacatcgca
    20761 tattcgcccg aaacctgata ggcataagtc ggtacgccga actcgtcctt cacgcggcgg
    20821 acaacgtcca aatacggcaa accgggcttc accatcacca tatccgcacc ttcctgaata
    20881 tcgagcgcca cttcatgcag cgcctcatcg gtatttgcag gatccatctg ataggtcttt
    20941 ttatctgcct ttcccaaatt gcccgaactg cctaccgcat cacggaaagg gccgtagaat
    21001 gcagaagcat atttggcgga atatgccata atccgcgtat ggatatgtcc ggcatcctcc
    21061 aaagcctcgc ggatggcgcc gatacgcccg tccatcatat cggaaggagc aacgacctgc
    21121 gtgcccgcct ctgcatgaca taaagcctgt ttcaccaaga cttctacggt ttcatcattc
    21181 atcacgtaac cgttttcgtc cgtcagtccg tcctgaccgt gcaccgtata aggatcgagc
    21241 gcgacatccg tcataatgcc cagttcggga aacctctcgc gcaaggctcg gacagttgac
    21301 ggcacgagtc cttcgggatt gtacgcctcc tgcgcacgcc cggttttgtt tgccgtaacc
    21361 acgggaaaga gtgccaacat cggaataccg agcttcaccg cctcttccgc cgtaaacagc
    21421 agcctgtcca aactctgacg cttcacgccc ggcatagaag gcacatcctc ctcgcgcgcc
    21481 gccccctcca atacgaacac cggataaatc aaatcatcgg cggtcagcat atgctcgcgc
    21541 atcaggcggc gtgaaaaatc atccctgcgc atacggcgca tacgcgaagc cggaacattg
    21601 cggtaaggaa attgcataag ccctccaatc atcctgtcaa caattcaaat catacggaag
    21661 ccgccgcaac ttgcagacgg catcgagcgg taatcaaaat ccgttttcac cggaaagggt
    21721 ttcggcacgc cgaaatgccg cgccgaagga cagcgtgccg cccattgaaa gaacaatagc
    21781 aaaacaacca cttcaggctg tcaggcctcg atattcttac gccacaatac caaaagtttc
    21841 ccgatatgcc gaacaggttg cgcgtcaacc gcctcacaca aggtattgca gatttcgata
    21901 cgctcggcac ggtcgtcgcc gaatacgcgc actttaatca gctcatgcgc cgtcagtgcc
    21961 gcatcggttt ccttgatgac tgcgtccgtc agaccctgct gaccgaccat cacaacagga
    22021 tggagatggt gcgcgcgcgc tttcaattcc aaaatttctt tggtgttcaa tttggtatcc
    22081 gccattttcc tactgtttga ataaaaagga taatgcagca ttgtacgcga tttggcacgg
    22141 caacggcaaa attaacgtac aatacaccgt ttacattccg acccgcgaac cactatggct
    22201 gtacgttcca aatcctcaaa agcgtggctg cacgaacaca tcaacgacca gtacgtccat
    22261 atggcgcaaa aagacggcta ccgcgcccgt gccgcataca aacttttgga aatcaacgaa
    22321 aaagacaaga taatcaaacc cggcacggta cttgccgact tgggcagcgc gccgggaagc
    22381 tggtcgcagg ttgccgccaa gctgacgggt acttccggag cggttttcgc cttggacatc
    22441 ctgcctatgg aagccatagg gggcgtgtcc ttcattcagg gcgacttccg cgagaacgac
    22501 gttttggcgc aattcgaaac cttgttggac aaccgcccgc tcgaccttgt aatctgcgat
    22561 atggcgccca atatgtcggg aaacgccgta agcgatcagg cacgcagctt ttatctgtgc
    22621 gaactggctt tggacttcgc ctcgcaacac ctgaaaaccg gcggcagctt tttggtcaaa
    22681 gtctttcagg gtgcaggcta tcaggaatac atggcagcca tgcgcgaaat tttcggcact
    22741 gtgcagacgc gcaaacccga agcctcgcgc aatcgctcca gtgagattta tttattgggc
    22801 aaaaataaac gctgacaata cagacggcgt gctttacaat catttccgtt ttacacctca
    22861 attatggagc cttgctaagt ggggaacacc tttaaatcaa tccttgtctg ggtcgccttg
    22921 ggtatcggcc tgatggctgc gttcaacgct ttggacggca aaaaagaaga caacgggcaa
    22981 atcgaatatt ctcagttcat ccgacaggtc aacaacggcg aagtatccgg cgtcaacatc
    23041 gaaggatccg tcgtcagcgg ctacctgatt aagggcgagc gcaccgacaa aagcaccttc
    23101 ttcaccaacg cgcccttgga tgacaacctg attcaaaccc ttttgaacaa aaacgtccgc
    23161 gtaaaagtaa cgccggaaga aaaaccgagc gcgctgactg ccctgtttta cagcctgctg
    23221 cccgtcctgc tgctgattgg cgcatggttc tactttatgc gtatgcaggc gggcggcggc
    23281 ggaaaaggcg gcgcattctc cttcggcaaa agccgcgccc gcctgctgga caaagatgcc
    23341 aacaaagtta cctttgccga tgtcgccggc tgcgacgaag ccaaagaaga agtgcaggaa
    23401 atcgtcgatt acctcaaagc accgaaccgc tatcaaagcc tcggcggccg tgttccgcgc
    23461 ggcatcctgc tggcgggcag cccgggaacc ggtaaaacac tcttggcgaa agccattgca
    23521 ggcgaggccg gcgtgccgtt cttcagcatt tccggttccg attttgtcga aatgttcgtc
    23581 ggtgtcggtg caagccgcgt ccgcgatatg ttcgagcagg caaagaaaaa cgccccatgc
    23641 attatcttta tcgacgagat tgacgcggta ggccgccaac gcggcgcagg tttgggcggc
    23701 ggcaatgatg agcgcgagca aacattaaac caattattgg ttgaaatgga cggttttgag
    23761 agcaatcaga ctgtaattgt gattgcggca accaaccgcc ccgacgtact cgatcctgcg
    23821 ctgcaacgcc ccggccgctt cgaccgccaa gtcgtcgtcc ccctgccgga catccggggg
    23881 cgcgaacaga ttttgaacgt ccattctaaa aaagtgcctt tggacgaatc tgtggattta
    23941 ttgtccctcg cgcgcggcac gcccggtttt tccggcgcgg atttggcgaa cctggtcaac
    24001 gaagccgccc tgtttgccgg ccgccgcaac aaagtcaaag tcgatcaaag cgattttgaa
    24061 gacgccaaag acaaaatcta tatgggtccg gaacgccgca gtatggtgat gcacgaagac
    24121 gaaaaacgtg cgacggcgta tcatgagtcc ggacacgcga ttgttgccga aagcctgccc
    24181 tttaccgacc ccgtccacaa agtaaccatt atgccgcgcg gacgtgcgct gggtctgact
    24241 tggcagcttc cggagcgcga ccgcatcagt atgtataaag atcagatgtt gagccagctc
    24301 tccatcctgt tcggcggacg gattgccgaa gacatcttcg tcggacgcat ctccaccggt
    24361 gcatcaaacg actttgaacg cgcaacccaa atggcacgcg aaatggtaac gcgctacggc
    24421 atgagcgaca aaatgggcgt gatggtttat gcggaaaacg aaggcgaagt cttcttgggg
    24481 cgcagcgtaa cccgttcgca aaacatttcc gagaaaaccc agcaggacat cgacgcggaa
    24541 atccgccgga ttttggacga gcagtatcag gttgcctaca aaatcctcga tgaaaaccgc
    24601 gacaagatgg aaacgatgtg caaagccctg atggaatggg aaaccatcga ccgcgatcag
    24661 gtactggaaa ttatggcggg caaacaaccc agcccgccca aggattacag ccacaacctg
    24721 cgcgagaatg cggacgcggc ggaagataac gcgccgcacg ctccgactcg ggaaaaaacc
    24781 gaagcacctg ccccggcaga caccgcctcg acagagtccg ggcagcagcc tgaaaacaag
    24841 gcttaacttc ccgaacaaac ggcagcccgc aagctgccgt tttcccatcc cgttttcaga
    24901 cggcattttc cgctcaatgc cgtctgaaac gccaaagccg tatcggtttt tgcgaatctg
    24961 cgatatggcg gtttaaattg aaatcagaac ggggcaaggc tgtaccggtt taaaattaaa
    25021 ccgctataat accgcccttc gaatacacgc ccgcattggt gatgcccgtg aaaaaagttg
    25081 aaaaaaacat cttggtgctg cacggcgcgg acaaaatgtt cgagctggtc gacaaggttg
    25141 aggattaccc gcactttctg ccgtggtaca gcaagaccga ggtcatcggg cgtagcggca
    25201 acgaactgaa ggcgcggctg tttatggatt atatgcgcgt tcgccaatcg tttgccacgc
    25261 acaaccgcaa catccccggc agggaaatcc gtatggaact gctcgaaggc ccgttcaaaa
    25321 ccttacgtgg aacgtggaaa tttatcgatt tgggcgacga tatgtgcaaa atcgaattca
    25381 atttggaata cgatttttcc aatgccgttt tgtccgcctt aatttccccc gtcttcaacc
    25441 acctttccgc cacgctggtc gaagcgttcg tcaaagaggc agaccgccgt tatgcttgaa
    25501 attgagattg tgtacggtct gcccgaccga caggttttga aaaccatgca gcttgccgag
    25561 ggaacaaccg tccgcaccgc cgcactgcaa agcggtttgg acggcatatt tgaaaattta
    25621 aacctgcatt ccgcgccttt gggcattttc ggcaaagccg tcaaagacga cacgccgctg
    25681 cgcgacggcg accgcatcga agtgtaccgc ccgctgttga tcgaccccaa agaagcgcgc
    25741 cgcaaacgcg ttcaaaatca agaagaataa ccatgccgtc tgaagccttc agacggcatt
    25801 cgacagaaac acggaaaata tcatgtcaaa cacaatcaaa atggttgtcg gcttgggcaa
    25861 cccgggcaaa gaatacgaac agacccgcca caatgcgggc ttttggttcc tcgacgaact
    25921 ggcgtggaaa tggaaggctt cgtttaaaga agaaaaaaaa ttcttcggcg aagttgcccg
    25981 cgccgccctg cccgacggcg atgtttggct gctcaaaccg gccacgttca tgaaccgttc
    26041 cggacaggcg gttgccgcgc ttgcacagtt ctacaaaatc aaacccgaag aaatcctcgt
    26101 cgtccacgac gaactcgaca tcccttgcgg acggatcaaa ttcaaactcg gcggcggcaa
    26161 cggcggacac aacggcttga aagacattca ggcaaaactc ggcacggcag actattaccg
    26221 cctgcgcctc ggcatcggcc accccggcga ccgcaacctc gtcgtcggct acgtcttgaa
    26281 caaaccgagc gcggaacacc gccggcaaat cgacgatgcc gtcgccaaat ccctgcaggc
    26341 cgtacccgac atcatttccg gcaaatggga agaggcaacg cgcttcctgc acagcaaatg
    26401 acccgatgcc gtcttaagcc ctttcagacg gcattttccc gatttccgta tccgaacagt
    26461 catgaccgaa ctcaagcagc ttatccaaac cgaatccatc cccgtcatcg aagaaaccct
    26521 cgatttcctg ctgtacgaat gcagcatcga cgacgcaccg tccgccgaag aagtggcaca
    26581 atggcgcgac atacttgccg cacgcggcgg caaattcctg cgcctgtcca aaatctgcca
    26641 aacgtggctg gacgaggagg cggcatgaag ctgccgcgca accgcttcag cctgctttcc
    26701 gcattgtggt ttgccggcgg catctattcg ctgctcttca aagctgccga caccgcgccg
    26761 ccgccgtttc cacatttcga caaagcagca caccttgccc tgtttttcgc acaaatcttg
    26821 cttctggcca aagcattcaa aaccggaaaa cttcccatcc cctaccgcag cctgattgcg
    26881 ttcgccttct gttttgccgt cggcagcgaa tgcgcgcagg catggtttac tgcaacgcga
    26941 accggcagtt tgggcgatgt ccttgccgac ctgacgggcg cagcccttgc cctctttgcc
    27001 gcgcgttctg cctgccgccc ggactaaatc ggtttatttc tcccaaacag gatgaatccc
    27061 cctgatgcat cctgtttttc cccttacata tcaatcccat ctcataaaca aaaccgacaa
    27121 atcgtttaca atatatttac actacaccga attacaaata tactcgaagc ggttgcagaa
    27181 ccgacggttt cgcagaccgt ttcggattgc acgacacaaa agaaaaaccg attttgttgc
    27241 cttaaaggag cattcatgaa cctgcatgca aaggacaaaa cccagcatcc cgaaaacgtc
    27301 gagctgctca gtgcgcagaa gccgattacc gactttaagg gtttgctgac caccattatt
    27361 tccgccgtcg tctgtttcgg catttaccac atcctgcctt acagccccga tgccaataaa
    27421 ggtatcgcgc tgctgatttt cgttgccgca ctttggttta ccgaagccgt ccacattacc
    27481 gtaaccgcac tgatggtgcc gattctcgcc gtcgtactcg gtttccccga catggacatc
    27541 aaaaaggcga tggctgattt ttccaacccg attatctaca tttttttcgg cggcttcgcg
    27601 cttgccaccg ccctgcatat gcagcggctg gaccgtaaaa tcgccgtcag cctgttgcgc
    27661 ctgtcgcgcg gcaatatgaa agtggcggtt ttgatgttgt tcctcgttac tgcctttctg
    27721 tccatgtgga tcagcaacac cgccaccgcc gcgatgatgc tgcctctagc aatgggtatg
    27781 ctgagccacc tcgaccggga aaaagaacac aaaacctacg tcttcctcct gctcggcatc
    27841 gcctattgcg ccagcatcgg cggcttgggc acgctcgtcg gctcgccgcc caacctgatt
    27901 gccgccaaag ccctaaatct ggacttcgtc ggctggatga agctcggcct gccgatgatg
    27961 ctgttgattc tgcccttgat gctgctctcc ctgtacgtca tcctcaaacc taatttgaac
    28021 gaacgcgtgg aaatcaaagc cgaatccatc ccttggacgc tgcaccgcgt catcgcgctg
    28081 ttgattttcc ttgccacagc cgccgcgtgg atattcggct ccaaaatcaa aaccgccttc
    28141 ggcatttcca atcccgacac cgttatcgcc ctgagtgccg ccgtcgccgt cgtcgtcttc
    28201 ggcgtggcgc aatggaagga agtcgcccgc aataccgact ggggcgtgtt gatgctcttc
    28261 ggcggcggca tcagcctgag cacgctgttg aaaacatccg gcgcgtccga agccttggga
    28321 cagcaggttg ccgccacctt ttccggcgcg cccgcatttt tggtgatact catcgtcgcc
    28381 gccttcatta tttttctgac cgagttcacc agcaacaccg cctccgccgc cctgcttgta
    28441 ccgattttct ccggcatcgc tatgcagatg gggctgcccg aacaagtctt ggtattcgtc
    28501 atcggcatcg ccgcatcttg cgccttcatg ctgccggttg ccacgccgcc taacgcgatt
    28561 gtgttcggca cgggcttaat caaacaacga gaaatgatga atgtcggcat actgctgaac
    28621 atcctatgcg tagtattggt tgctctgtgg gcttatgctg tactgatgta aaccatcgac
    28681 ctaaacaaca agaccgtctg aaagaatatt tttcagacga ccttgaagtt tgtcgttcag
    28741 acacaatttg tcgaataatt caaaaccgga ttctaacgaa aggaaaaccc atgattatcc
    28801 tgcacaccaa caaaggcgac atcaaaatcg aactcgattt cgacaaagcc cctgttaccg
    28861 ccaaaaactt cgagcaatac gtcaaagacg gcttctacga cggcgtaatc ttccaccgcg
    28921 tcatcaaagg cttcatgatt caaggcggcg gcatggatga aaacatgaac gaaaaagaaa
    28981 cccgcgatcc gattcaaaac gaagcgtcca acggcctgcc caacgataaa tacaccatcg
    29041 ccatggcgcg cacttccgac ccccattccg ccggcgcgca attcttcatc aacactgccg
    29101 acaacgcttt cctaaacttc cgttctaaag agctgtacgg caaaaccgtc gtccaagact
    29161 ggggctatgc cgtattcggt aaagtcgttg acggttttga cgttgtcgat gccatcgaaa
    29221 gcgtatccac caaacgccac ggctaccacg acgatgtgcc gaccgaacct gtcatcatca
    29281 ttaaagccga agcagtataa accggcaatc cgaaagcagc ctgcataaaa ggctgctttt
    29341 atttcagacg gcatgttatt tgatgtaacc gggctatgcc gtctgaaaac cggacgcaag
    29401 ccttcagacg gcataccgct atgttaaaat acgcccgttt ttcctaaacg gacacaaagg
    29461 aaaccttatg gcaagcatca cccgcgacat cttcaaagcc tacgacatcc gtggcatcgt
    29521 cggcaaaacc ctgaccgacg atgccgctta tttcatcggc agggccatcg ccgccaaagc
    29581 cgccgaaaaa ggtatcgccc gcatcgcgct cggacgcgac ggacgcttga gcggccccga
    29641 actgatggag cacatccaac gcggcctgac cgacagcggt atcagcgtac tcaatgtcgg
    29701 catggttacc actcctatgc tctacttcgc agccgtcaac gaatgcggcg gcagcggagt
    29761 gatgattacc ggcagccaca atccgcccga ttacaacggt ttcaaaatga tgctcggcgg
    29821 cgacacgctc gcaggcgaag ccattcaaga acttttagct attgttgaga aagacggttt
    29881 tgttgccgcc gacaaacaag gcagcgtaac cgaaaaagac atctccggcg cataccacga
    29941 ccacatcgtc ggacacgtca aactcaaacg cccgataaac atcgccatcg acgcgggcaa
    30001 cggcgtgggc ggcgcgtttg ccggcaaact ctacaaaggt ttgggcaacg aagtgaccga
    30061 acttttctgc gaagtggacg gcaatttccc taatcaccac cctgatcctt ccaaaccgga
    30121 aaacctgcaa gatttgattg ccgcgctgaa aaacggcgat gccgaaatcg gcttggcgtt
    30181 tgacggcgat gccgaccgct tgggcgtggt taccaaagac ggcaacatta tttatcccga
    30241 ccgccaactg atgctgttcg cccaagacgt tttgaaccgc aatcccggcg cgaaagtcat
    30301 tttcgatgtc aaatccacac gcctgcttgc cccgtggatt aaagaacacg gcggagaagc
    30361 cataatggaa aaaaccggcc acagcttcat caaatccgct atgaaaaaaa ccggtgcact
    30421 ggttgccggc gaaatgagcg gacacgtttt ctttaaagaa cgctggttcg gcttcgacga
    30481 cggcctgtat gccggcgcac gcctcttgga aatcctgtcc gcctccgaca atccgtccga
    30541 agtgttggac aacctgccgc aaagcatttc cacgcccgaa ctcaacatct ccctgcccga
    30601 aggcagcaac gggcatcaag ttatcgaaga actcgccgcc aaagccgaat ttgaaggcgc
    30661 aaccgaaatc atcaccatcg acggcctgcg cgttgaattt cccgacggct tcggtctgat
    30721 gcgtgcttcc aataccacgc cgattttggt gttgcgtttt gaagcggata cgcaagcagc
    30781 catcgagcgc attcaaaacc gattcaaagc cgtcatcgaa agcaatccgc atttaatctg
    30841 gcctctgtaa aaatagaaaa aatgccgtct gaaactttca gacggcattt ttcacaagta
    30901 gccaatcaaa tcttggcaga ttggatttgg cttaaaaatc tccgcgtccg ttcgtgtttg
    30961 aggtggtcga acaactcttt cgggctgccc tgctctacga taacgccgcc gtccatcacg
    31021 acgacgttcg tggcaacttc cagcgtgaac ttgatttcgt gggtaacgac gaccatcgtc
    31081 caaccttccc gcgccaattc cttcatggcg tccaacacgt cttgcaccaa ctcggggtcc
    31141 agcgcggaag tgggttcgtc aaacagcatc aattcaggct gaatcgccag tgcgcgggcg
    31201 ataccgacac gctgctgctg accgccggaa agctggtagg gatacaaatc cactttatcg
    31261 cccaagccga ctttttccag cagtttcaaa gcctcttcgc gcgcttgggc ggcaggcttg
    31321 ccctgtacgg caaccggccc ttccatcacg ttttccaaca cggttttatg cgggaagagg
    31381 ttgtattgtt ggaataccat tccggacttg cggcgcagtg ccaaaatatc gtgtttgctt
    31441 gtttttttgg aaaaatcaat gcgtaacggc cgcgcgttgt cgaactcgat ttgtccgtct
    31501 tcgggcattt ccaacgcgtt taggcagcgc agaaatgttg ttttacccga gccggaaggc
    31561 ccgaggatga cgaccacctg ccctttgccc acatccaaat cgatgccgcg caaaatggtg
    31621 ttttcgccaa aggtcttatg gatattgcgg attttaatca tgacaactcc ttatttggcg
    31681 acataacggt cgaaacgttt ttccaaacgc gcctgaatca aaaacagcac tttacagaaa
    31741 caccaataaa ccaatgcagc ttcgatatag acaggcaaaa agtcataagt gcggtttgcc
    31801 gtttcctgtg cgacacggaa aagctccgtt accgttacca cggcggcaag cgaggtgttt
    31861 ttgaacaagc cgataaattc gttgctcaac ggcggaacgg cgacgcggaa tgcctgcggt
    31921 gcgacgatgc ggcggaacgt ctgcatatag gtcataccga tggagaaacc tgcttcccac
    31981 tgccctttcg gcacggacaa aatcgccgcg cgtatggttt cggaagcgta tgcgccgaca
    32041 ttgagcgaaa agccgatgat ggcggcggga atcggattga tatagatgcc gacggacggc
    32101 agcccgtaaa acacaatcac aagctgaacc aacagcggcg taccgcgaac gacggaaata
    32161 taaaattcca ccagcttcaa caagcatttt tggaaaatac cgccggaagg catgattctt
    32221 accaaagcaa cggctacggc aataatcatg ccgataacga aagaagcgat cgccaaaggc
    32281 aaagacactg taaagccggc tttaaccatg ggccaaaacg cgctgatgag catatcagcg
    32341 cgtgtttccg tcataaacgg cagagaggca aggaaattat tgaacactga tgtcttttcc
    32401 gaagaattgt tcgcccagtt ttttcaacgt gccgtcggct ttcagctcgt tgattgccgt
    32461 gctgaatttc gccacggcct cgtcattgcc cttgttgaca atcagaccgg aaccgacttt
    32521 ttcatcggca ggcgcggacc acacgatttt cacccccgca ttcgggtttt tcttcagata
    32581 gtccaaaacc gccaattcat cgttcaacgt cgcatcggcg cgtttttgtt caatcagggt
    32641 cagcgattgc gccaaaccgt ccaccggcac gagttccgca cctgcggctt tggctttttc
    32701 gccgtagttg ctggtcaggg attgcgcggt tttcacgcct ttgatgtcgg ctatggattt
    32761 aatgttgctg tcgttatgcg caaccaaaac cgcaccgctc cagctgtaag gttcggattt
    32821 gtcaaatgtc gcctggcgtt cggggctggt caggccgact tggtttgcca ccacgtcgaa
    32881 acgtccggct ttcaaacccg ccatcatcga atcccattgc gtttctttaa actcgacttt
    32941 tacgcccagt ttttccgcca cggcgcgggt tacttccacg tcataaccgg tcagtttgcc
    33001 gtctttgtcg tggtaggtaa acggtgcgta agtgccttcc gtgccgacgg taaccgtgcc
    33061 tttattgttg atgcgctcga ttaaagaacc ggaaattgcc gattgtgcag gcgcggaaga
    33121 tgctccgctg ccgccttccg aaccgccgca ggccgccaaa accaatgcgg caatgccgcc
    33181 gagtacgaat tttttcaaca tcattccctc ctgtaaaaag tgtgcaagtg cggcattcta
    33241 agtgaaattg cggcaaacac aaagaatact ttttttatat ggttattcca aatcggaatg
    33301 ggaaagatat gccgaagccg ccggaagcgg aaataaaggg ggcgggaaag gcggcgggcg
    33361 gcacgaaacc gaaaagcggc atcaggtatg caaacggcgg attcacgcac gccgttccgg
    33421 caaaaatccg cctgccgatt cggtgctata atccacccga aacagatgac accaaaaagg
    33481 aacatctcat gaacacgccc caatccgcca tcattcccga ccacgcccaa gccggcatct
    33541 ttatcgaagc cgacttcgcc gccaaccgcc tcaacgatat taaagccgcc tgccgcgctt
    33601 cgctcgacgc gttatccgcc ttgaaagccc gctttccgga cgatattttg ggtctgacca
    33661 tcgccttcgg cagcaaagct tgggcaacat tcggacacac ggacgaaggc agtgaaatca
    33721 aacccttccc cgaaatgggc aacgggcttg cgccgtccac gcagcacgat atgtccatcc
    33781 acatccaatc cttccgccaa aacgccgcct acgcgcttgc ccaatccgtt ttgggcgcgt
    33841 tcggcgacag catatgcgtc gcgtccgaag aacacggttt gcgcctgtat caggatcgcg
    33901 ggctggacgg tttcgtcgac ggcacggaaa acccgcaagg cgatgaaaca atccgcgaag
    33961 tcgccatcat ccccgaaggg ctgcccgatg caggcggcag ctatgtcctg ctgcaaaaat
    34021 acctgcacga tttgaaaaaa tgggatgccg tccccgtcgc cgaacaggag gcctcggtcg
    34081 gacgcagcaa ggaaaccgac gacgaattca gccgcgatgt ccgcctgccc gattcgcacc
    34141 tcggccgcgt caacctgaaa gaaaacggag tcggcctgaa aatcgtccgc cgcagcctgc
    34201 ccttcggcaa aatcagcggc gaacacggtt tgatgtttac cgcatactgc cgcacgctgc
    34261 ataatatcga agcgcaatta ttgagtatgt tcggcgacac ggacggcaaa accgacctgc
    34321 tgctccgaca cctctccgcc gccgtttcgg gcggatacta ctacgcgccg tctgtcgaac
    34381 gcctgcaaaa cctctaagcc ggacgatgcc gtctgaaacc ctttttcaga cggcattttc
    34441 ccgttttacc gtccaaccgt tttcatacac gctatgtccg cacccatccg agcattcgac
    34501 ccgctgaccg cccccatttc cggcaccaac ctgattgagg cctctgccgg caccggcaaa
    34561 acctacggca ttgccgccct gtttacgcgc ctgatcgtat tggaacaaaa aagcgtcgag
    34621 cgcgtattgg tcgttacctt caccaaagcc gccactgccg agctgaaaac acgcctgcgc
    34681 gcgcgtttgg acgatgtgtt gcaggttttg gaaagcaaag aaattgccga acttggagac
    34741 gacacgcttt cagacggcat tgccgcctac tgcgccgaac accacgaagg cgacaccttc
    34801 ctgcccgcac tcttggaaca ggctttgcaa aaagaaagcc ggacgcgtct gattgtccgc
    34861 ctcaaggccg ccatcgggca attcgacaac gccgccatct acaccatcca cggcttctgc
    34921 cagcgcatcc tgcgcgacta cgccttcctg tgccaagcac cgttcgatgt cgaactgacc
    34981 gaagaagacg gcgaccgcct gcttgtcccg gctcaagatt tttggcggga acgcgtcagc
    35041 ggcgacccgg tgcttgccgc attggcgttt aaacgcaaag ctgtgccgca aaccgtcctt
    35101 gcccaaatcc gcgcctacct gtcccgcccg tacctgaatt tccgccgtcc gcaggcggat
    35161 ttgaaacagg cgcagcgcga cgccgaaacc tcatggcaaa ccgtctgccg cctgctgccc
    35221 gagctggaag ccggcttttg gcgcatccat cccgacctca acggcaacag ttaccgcaaa
    35281 aacagcttcg gcaacctttt taaagaactg gcacaaaaat ccgccgccgg acaactgccc
    35341 tgtctggaca aagacacgca cgaacggctc ttgaaactct catccgacaa actcgaagcc
    35401 ggactgaaaa aaggcaaaac gcccgatgcg gcagtatttg ccgaattgca gaaactggca
    35461 gacttcgggc gcgatttgaa cgcactcgaa gaagcggaag aaacaacaat gatccggctg
    35521 caactggatt taatcgaata tctcaacagc agccttgccg aaatgaaaaa atcgcgccgc
    35581 gaacgcggtt tcgacgacct gctgctcgat gtccacaccg cgctgaccga caatccgcac
    35641 gccgaaaccc ccgcccgcgc cgttgccgaa aactgggaaa tcgcgctgat cgacgagttc
    35701 caagacaccg acccgctgca atacgaaatc ttccaaaaga ttttcatcgc ccgaaaccgc
    35761 ccgctgttcc tcgtcggcga ccccaaacag gcgatttaca gctttcgcgg tgcggacatt
    35821 tacgcctacc ttcaggcggc ggaagacgcg cggcaccgct acacgctcgc caccaactac
    35881 cgcagccacg ccgcgcttat cggcagcatc ggcgcgctgt tccgcctcaa agaacgcccg
    35941 ttcgttttgg aaaacatcgg ctattcggaa gtcggtgcgg cgcgtgccga aagcaggttg
    36001 tcgcccaaac gtcctgccgt acagctccgt tggctgcacg aaaacgacaa tgaaaaagcc
    36061 aacaaagacg ttttgcgccg ccgtgccgcc gactattgcg ccgacgaaat cgcccgcgcg
    36121 ctcaacgaag cctccggagg ccgtctgaat ttcaaaggcc gcccgttgca gtcgggcgat
    36181 attgccgttc tggtacgcac gcacaacgag gcggtgatga tttccgccgc actgaaaaaa
    36241 cggcaggtgc aaagcgtcct gctttcgcgc gaatccgtgt tcgcctcgcc cgaagccgcc
    36301 gccctgtccg cgctcatcgg cttctggctc gaaccgcgcc gcgccggaac gctgcgcttt
    36361 gtcctgacaa gcggcatatt cggttatgac gcgcagcaat tgcacgactt caaccaaaac
    36421 gaaagcgaga ttttgcattg ggcggaatct gcccgaaccg cgctcgacat atggcaaaaa
    36481 tacggcattt tcgccgctat gcagcagttt tcccaaacac acggcatcga aacgcgcctc
    36541 ttaagccgga acaacgggcg cagcctgacc aattatttcc aactgctcga actgcttgcc
    36601 gccgaagacg cgcaaaaccg caaccccgcc gcactgcaca aatggctgcg cgatcaaatc
    36661 agcctggccg gcaacaacgg cggcgacaac cgcgccatcc gtttggaaag cgacgaagat
    36721 ttggtcaaaa tcgttaccat gcacgcctcg aaaggtttgc agtatccgct ggtgtactgc
    36781 ccgtttgcgt gggacgcgca agataccgga ccgtccgact ggcaaatcct ccaccaaggc
    36841 gcaaaccggg ccgaactttt ggcaaaggcg caactgtcgg aaagcgaaca gaagcaatac
    36901 gccgacgaag aaatggcgga acgcctgcgc ctgctttatg tcgcgctgac gcgtgccgag
    36961 gaacagctca acatctacgc cgcctattct tccgataccg ccgacaaccc ccttgcctac
    37021 ctgatcgaag gcttgccgca agacagccgc gaaaccgtcc gccgtaccta tgcgtgtgaa
    37081 aaagacggca taacgatgct caaacgcaac tggcggcgcg tggcggacaa tgccccggcc
    37141 ggcacggatt tcgccttcac agaagatgcg ccgccccctg ccgcctatcg cggcaacgcc
    37201 gatcaagccg ccgaatttgc cgcaaacagc attcccgaac gcggattccg atttgtccgc
    37261 cacaccagct ttaccgcctt aagccgccat acccaaacgc ccgacggcgg cgaagaagat
    37321 gcctgcccgt ccttggatgc cgccgaaacc tcggtgccgg cgatgccgtc tgaaacgccg
    37381 acggcttcag acggcatatc gatacacgac tttccgaaag gcacgcaggc ggggctgtgc
    37441 ctgcacgaaa ttcttgaaga tttcaaattc ggacaagcag ccgccgaaca ggaaaccctc
    37501 attgccgaca agctgaaaaa atacggtttt gaagaaatat ggctgcccgc cgttgccgaa
    37561 atggcggaag cctgccgcaa aacgccgctg actggggcat acggcctgtc cgacatcccg
    37621 cccgggtgcc gccgtcccga aatgggcttt accctccaca ccgaagactt cggcctcaaa
    37681 cggctgcgcg actggcttgc ccgcgacgac atcaggctgc ccgaagtctg ccgtgccgcc
    37741 gccgagacgc tcgacttcca caccgtcaac ggctttttaa acggctttat cgatatggtc
    37801 tgccaagacc ccgacggcaa tatctgcatc atcgactaca aatccaacca cctatccgcc
    37861 tacacgcggc aggcgatgga cgaagccgtc gcgcaccagc actattacct tcaggcactg
    37921 atttacgccg ttgccgccgc gcgctacttc aaactgcgcg gacaaccgcc cgccgccgtt
    37981 tccgtccgct acctgttttt gcgcggattg gatggcaaag gcggcggcgt ttggcgttgg
    38041 gacatagatg ccgccgcttt ggaacagata aaataacttc ccgtccctta agacgacaac
    38101 cgcaggagaa ccctatgaat atcaaacaat tgattaccgc cgcactcatt gcctcagccg
    38161 cctttgccac gcaggcagcc ccgcaaaaac ccgtatccgc cgcccaaacc gcgcaacatt
    38221 cagccgtttg gatcgatgtc cgttccgaac aggaatttag cgaaggtcat ttgcacaacg
    38281 cggtcaacat ccccgtcgac caaatcgtcc gccgcatata cgaagccgcg cccgacaaag
    38341 acacgccggt caacctctac tgccgcagcg gacggcgtgc cgaagccgcc cttcaagagc
    38401 tgaaaaaagc aggttataca aatgttgcca atcacggcgg ttatgaagac ctgctcaaaa
    38461 aagggatgaa atgacgcaat gccgtctgaa aggacaggct ttcagacggc atacggcgtt
    38521 ccggcacgcg gcacggcatc aggcgcggcg cgtgccgccc cgtccgaagc ccgataaaca
    38581 aaccgataag gaaatacgat gaaacacata ctccccctga tcgccgcatc cgcactctgc
    38641 atttcaaccg cttcggcaca ccctgccgac aaaccgccca cccaaaacga aaccgctatg
    38701 accacgcaca ccctcacctc gaaatacagt tttgacgaaa ccgtcagccg ccttgaaacc
    38761 gccataaaaa gcaaagggat ggacattttt gccgtcatcg accatcagga agcggcacgc
    38821 cgaaacggcc tgaccatgca gccggcaaaa gtcatcgtct tcggcacgcc caaggccggt
    38881 acgccgctga tggtcaaaga ccccgccttc gccctgcaac tgcccctgcg cgtcctcgtt
    38941 accgaaacgg acggcaaagt acgcaccgcc tataccgata cgcgcgccct catcgtcggc
    39001 agccgcatca gtttcgacga agtggcaaac actttggcaa acgccgaaaa actgatacaa
    39061 aaaaccgtag gcgaataagc ccgtcgccga catatggcgg atggaaatca aatgcacacg
    39121 cccctcattc ccccgaagtc gggaatccaa gcggttgggt taccgtgatt tccaatcatt
    39181 gccgaaacgg acgattccgg attcccgcct tcgcagggat gacgggcgta tgcgttttgc
    39241 catatcacag gcaactttgc cgcaaatctt atctgtcgcc ggtatgcctt cttgtttcaa
    39301 tccgccacaa accaaatgcc gtctgaaacc tgatttcaga cggcatttcc gtttattccc
    39361 tgctgtcgcg gcaaatatcg atggcttcct gcaaacttga aacgccgtgg attttcaggt
    39421 tcggaaactc tttggcattg cgcggcatat tggctttggg gacgatggcg cgtttgaagc
    39481 cgagcttttc cgcttctttg agccgctctt gtccgcgtgc gacggggcgg acttcgccgc
    39541 ttaggccgat ttcaccgaag accacggttt tttcaggcat agggcggttg cggaagctgg
    39601 aaagcatcgc gaggatgacc gccaaatccg ccgccggttc gccgattttc acgccgccga
    39661 cggcgtttaa aaaaacatcc tgatcgaaac aggcgatgcc gccgtgccgg tttaacacgg
    39721 caagcagcat cgcaaggcgg ttttgttcca atccgacgct gaggcgtttg ggtgtgaagc
    39781 cgtgcgcgtc atcgaccaat gcctgaattt cgaccaaaag cgggcggctg ccttcctgtg
    39841 taaccaaaac gcacgaaccg ggcgtgtcgt cgcggtagct ggcgaggaag atggcggacg
    39901 ggttggatac gcctttcaaa ccgttttcgg tcatcgcgaa cacgcccaat tcgtttgccg
    39961 cgccgaaacg gtttttgatg gcgcgtatca tgcggtagtt ggaatgttgg tcgccctcga
    40021 aatacagcac ggtatcgacc atatgttcca gcacgcgcgg gccggcaatc gctccgtctt
    40081 tggtaacgtg tccgaccagt atcatggcga tacccatttg tttcgccata cgcgtcagtt
    40141 gggcggcaca ttcgcgcacc tgcgacacgg aaccgggggc ggacgtgatt tggtcggaat
    40201 acatggtttg gatggaatcg ataacgacga cttcgggctg atgctgtttc aaggccgcct
    40261 gaatcgcttc catgcggatt tcggcaagca ggtttacgcc ttcggcgtgc agttccaaac
    40321 gttgcgagcg cagggcgacc tgttgggcgg attcttcgcc ggaaacgtac agcactttgc
    40381 ggctttgcgc cattttggcg atggtttgca acaacagcgt ggatttgccg atgccgggat
    40441 cgccgccgag caggatgacc gcgccatcga ccaaaccgcc gcccaatacg cggtcgagtt
    40501 cgcccatacc ggtcggattg cgcggcactt cggcagcggt aacggcggag agggattgga
    40561 cggtcgaagt gtccgccgcc caagattgga atcgggcgtt tttcggctcg ggcgcggcaa
    40621 agctttcctg aagcgtgttc cactcgccgc aatgcggaca tttgccctgc catttcgggg
    40681 aagtgccgcc gcattcggtg cattggtaaa gggttttaag cgtttttgcc atgatgtttt
    40741 ccctatggga tttttgaagt gtaaaaaaat cgtctgaaac ttcttttcta aaaaattttt
    40801 tattattagt ttgttaattt tgattacaag accatatcac gatacaaaca agggtggctt
    40861 tctgttattt tgcggcataa tgacggaaaa tacaaaacag gaatcccaaa caatgacttt
    40921 cccattaaat ataatggtag a
//
LOCUS       DAXFZM010000008        40688 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.008, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000008 DAXFZM010000000
VERSION     DAXFZM010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 40688)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 40688)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..40688
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.008"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(474..2903)
                     /gene="hupB"
                     /locus_tag="ACFJAG_000322"
     CDS             complement(474..2903)
                     /gene="hupB"
                     /locus_tag="ACFJAG_000322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemoglobin-haptoglobin-utilization protein HupB"
                     /protein_id="HFC3979717.1"
                     /translation="MPIPFKPVLAAAAIAQAFPAFAADPAPQSAQTLNEITVTGTHKT
                     QKLGEEKIRRKTLDKLLANDEHDLVRYDPGISVVEGGRAGSNGFTIRGVDKDRVAINV
                     DGLAQAESRSSEAFQELFGAYGNFNANRNTSEPENFSEVTITKGADSLKSGSGALGGA
                     VNYQTKSASDYVSEDKPYHLGIKGGSVGKNSQKFSSITAAGRLFGLDALLVYTRRFGK
                     ETKNRSTEGDVEIKNDGYVFDPANPSPSRYLTYKATGVARSQPDPQEWVNKSTLFKLG
                     YNFNDRNRIGWIFEDSRTDRFTNELSNLWTGTTTSAATGDYRHRQDVSYRRRTGVEYK
                     NELEHGPWDSLKLRYDKQRIDMNTWTWDIPKNYDTNGINGEVYHSFRHIRQNTAQWTA
                     DFEKQLDFSKAVWAAQYGLGGGRGDNANSDYSYFAKLYDPKILASNQAKITMLIENRS
                     KYKFAYWNNVFHLGGNDRFRLNAGIRYDKNSSSAKDDPKYTTAIRGQIPHLGSERAHA
                     GFSYGTGFDWRFTKHLHLLAKYSTGFRAPTSDETWLLFPHPDFYLKTNPELKAEKAKN
                     WELGLAGSGKAGSFKLSGFKTKYRDFIELTYMGVSSDDKNNPRYAPLSDGTALVSSPV
                     WQNQNRTAAWVKGIEFNGTWNLDSIGLPKGLHTGLNVSYIKGKATQNNGKETPINALS
                     PWTAVYSLGYDAPSKRWGVNAYAARTAAKKPSDTVHSNDDLNKPWPYAKHSKAYTLFD
                     LSAYLNIGKQVTLRAAAYNITNKQYYTWESLRSVREFGTVNRVDNKTHAGIQRFTSPG
                     RSYNFTIEAKF"
     gene            complement(2931..4012)
                     /gene="hupA"
                     /locus_tag="ACFJAG_000323"
                     /pseudo
     CDS             complement(2931..4012)
                     /gene="hupA"
                     /locus_tag="ACFJAG_000323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699363.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hemoglobin-haptoglobin-utilization protein HupA"
     gene            4255..5871
                     /locus_tag="ACFJAG_000324"
     CDS             4255..5871
                     /locus_tag="ACFJAG_000324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012504106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="surface lipoprotein assembly modifier"
                     /protein_id="HFC3979718.1"
                     /translation="MMRRVRRAWGLRRFCRRRPAVFFKEGKLKDSVYRVCRLCAALCV
                     WGAVGAYAAGLPDVRDDAAALRAQRAAAEGWAGMPPEGDSAANGGSRVIDGDFLLSRP
                     QLLEHVLRDALNGNQADLIASLADLYAKLPDYDAVLYGRARALLAKLAGRPAEAVARY
                     RALHRDNAADERVLLDLAAAEFDDFRLKSAGLHFAEAAKLDLPAPVLENVGRFRKKTE
                     GLTGWHFSGGISPSVNKNANNAAPQYCLQGGGSRICSVTGPVRAAGLDYEAGAEKLTA
                     LADNHYLLFRANVGGTSYYFSRKSAYDDAFGRAYLGWQYKNARQTVGVLPFYQAQLSG
                     SDGFDAKTKPPADRRLAPYMLAHGAGVQLAHSYRLSRRSQLSVSLERYRQRYREQGRA
                     ERNDGWQDGLYVSLARRLGGSATVFGGWQFARFVPKRETVGGAVNNAAYRRNAVHIGW
                     AQEWGGTGGLNSRIAASYAHRNYKGIAAFSTEAQRNREWNVSLALSHDKLSYKGIVPT
                     LNYRFGKTESNVPYAKRRNSEVFVSADWRF"
     gene            complement(5932..7806)
                     /locus_tag="ACFJAG_000325"
     CDS             complement(5932..7806)
                     /locus_tag="ACFJAG_000325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate-binding protein"
                     /protein_id="HFC3979719.1"
                     /translation="MPYFALFDDAVSGRAKLYQNHVESRFFRPEELDALDGALQSGWQ
                     KGLHSVLFADYEFGLPLMGMESERGGNIALHWFADCADTDAESWLARHSDGIPAGIST
                     PQSSVSETDYLDRIRQIHEAIRRGDTYQINYTTRLHLQAYGNPVSLYRRLRQPVPYAV
                     LSHLPDEAGQSAWTLCFSPELFLNIASDGIISTEPMKGTAPILGDGQDERRAAELQAD
                     PKNRAENVMIVDLLRNDLGKIAQTGKVCVPEPFKVSRFGSVWQMTSTIRAQALPDTSF
                     ADTLRAAFPCGSITGAPKKMSMQIIESLETEARGLYTGSIGYLNPCSGGLGFEGAFNV
                     VIRTLSLKPVSDGIVSGIGGTDSNAQARTAGQGGETPHPFEANPPYRGVYGVGSGIVI
                     DSDPAAEYRECGWKARFLNELRPDFGIFETLRAENRQCALLDRHLCRLKTSAQALNLP
                     LPDGCENQIKQYIADLPDGAFRIKALLASDGISLSHAVLNRLTDKQRVIISPTILPAQ
                     NYLRRFKTTHRAIFDQAWQTAETQGAFDSLFFNSDGILLEGGRSNVFVKHRGQWLTPS
                     LDLDILNGIMRQAVSDEPQKYLHTNQVIETHITQKTLQGAEEIRLSNALRGVFAAVLA
                     "
     gene            7969..8899
                     /gene="ppk2"
                     /locus_tag="ACFJAG_000326"
                     /pseudo
     CDS             7969..8899
                     /gene="ppk2"
                     /locus_tag="ACFJAG_000326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688308.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0008976 - polyphosphate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006793 - phosphorus metabolic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 2"
     gene            complement(8981..10412)
                     /gene="aldA"
                     /locus_tag="ACFJAG_000327"
                     /pseudo
     CDS             complement(8981..10412)
                     /gene="aldA"
                     /locus_tag="ACFJAG_000327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449564.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
     gene            complement(10520..11435)
                     /locus_tag="ACFJAG_000328"
                     /pseudo
     CDS             complement(10520..11435)
                     /locus_tag="ACFJAG_000328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240797.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
     gene            11608..12408
                     /locus_tag="ACFJAG_000329"
     CDS             11608..12408
                     /locus_tag="ACFJAG_000329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HFC3979720.1"
                     /translation="MSPSPFIEMKDVAFAYGDRPILNDINFSIPQGNFAAVMGGSGSG
                     KTTLMRLITGQIRPQSGQVLIEGRDLAGFSADELYEHRRRMGVLFQHGALFTDLSVFD
                     NIAFPMRELTQLPEAVIRDLVLLKLNAVGLRGVENLMPSELSGGMSRRVALARTIALD
                     PEIMLYDEPFTGLDPISLGVIAHLISRVNKALRSTSIMVTHDIEKSLEIVDQVIFLAH
                     GEIMFSGSPQEMRELDSPWVRQFVGGLADGPVAYRYPAQTSLQQDLLG"
     gene            12456..13232
                     /gene="mlaE"
                     /locus_tag="ACFJAG_000330"
     CDS             12456..13232
                     /gene="mlaE"
                     /locus_tag="ACFJAG_000330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance ABC transporter
                     permease subunit MlaE"
                     /protein_id="HFC3979721.1"
                     /translation="MNFIRSVGAKTLGLIQPFGSITLFLLNILAKSGTAFARPRLSVR
                     QVYFAGVLSVLIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLA
                     AILFASSAGGAMTSEIGLMKTTGQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIF
                     NVAGIFGAYLVGVSWLGLDSGIFWPQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQ
                     GFHCIPTSEGILRASTRTVVSSALTILAVDFILTAWMFTD"
     gene            13283..13777
                     /gene="mlaD"
                     /locus_tag="ACFJAG_000331"
     CDS             13283..13777
                     /gene="mlaD"
                     /locus_tag="ACFJAG_000331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015914 - phospholipid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipid asymmetry maintenance
                     protein MlaD"
                     /protein_id="HFC3979722.1"
                     /translation="MKKNILEFWVGLFVLIGAAAVAFLAFRVAGGAAFGGSDKTYAVY
                     ADFGDIGGLKVNAPVKSAGVLVGRVGAIGLDPKSYQARVRLDLDGKYQFSSDVSAQIL
                     TSGLLGEQYIGLQQGGDTENLAAGDTISVTSSAMVLENLIGKFMTSFAEKNAEGGNAE
                     KAAE"
     gene            13808..14398
                     /locus_tag="ACFJAG_000332"
     CDS             13808..14398
                     /locus_tag="ACFJAG_000332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid-binding protein MlaC"
                     /protein_id="HFC3979723.1"
                     /translation="MKKSSFISALGIGILSIGMAFASPADAVGQIRQNATQVLTILKS
                     GDAASARPKAEAYAVPYFDFQRMTALAVGNPWRTASDAQKQALAKEFQTLLIRTYSGT
                     MLKFKNATVNVKDNPIVNKGGKEIVVRAEVGIPGQKPVNMDFTTYQSGGKYRTYNVAI
                     EGTSLVTVYRNQFGEIIKAKGIDGLIAELKAKNGGK"
     gene            14449..14727
                     /locus_tag="ACFJAG_000333"
     CDS             14449..14727
                     /locus_tag="ACFJAG_000333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance protein MlaB"
                     /protein_id="HFC3979724.1"
                     /translation="MHTELKNGTLHIGGDITVKTLTGDAFGRFRQQCRLKETIAVDFG
                     GVKRADSACVSLLLEVLRGCKGSVRLTGIPESVRALSELYEIKDWLKS"
     gene            14724..15551
                     /locus_tag="ACFJAG_000334"
     CDS             14724..15551
                     /locus_tag="ACFJAG_000334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ family lipoprotein"
                     /protein_id="HFC3979725.1"
                     /translation="MKKTAYAILLLIGFASAPAFAETRPADPYEGYNRAVSKFNDQAD
                     RYIFAPAARGYRKVTPKPVRAGVSNFFNNLRDVVSFGSNILRLDIKRASEDLVRVGIN
                     TTFGLGGLIDIAGAGGVPDNKNTLGDTFASWGWKNSNYFVLPVLGPSTVRDALGTGIT
                     SVYPPKNIVFHTPAGRWGTTAAAAVSTREGLLDLTDSLDEAAIDKYSYTRDLYMKVRA
                     RQTGATPAEGTEDNIDIDELVESAETGAAEPAVHEDSVSETQAEAAGEAETQPGTQP"
     gene            15676..16038
                     /locus_tag="ACFJAG_000335"
     CDS             15676..16038
                     /locus_tag="ACFJAG_000335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003681812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ"
                     /protein_id="HFC3979726.1"
                     /translation="MYEVNRSVFVLIPLEPFWNWLQTLPGNHLDGLTLEDIQADANSY
                     LVRPCETADEVWDEIEARFEDIFAAELADWCEDEREWPALDADIFNEWFDIQLSTVIT
                     DLEHEPLAREAFQPINLN"
     gene            16038..16421
                     /locus_tag="ACFJAG_000336"
     CDS             16038..16421
                     /locus_tag="ACFJAG_000336"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HFC3979727.1"
                     /translation="MKLTVRNYHLDGYGHVNNARYLEFLEEARWAFFEKRGLMHELAG
                     LILIVARIDIRYSRPAVEGDVLQFSCRLKTPGMRRIVLTQTITLPNGKTAAEADITLM
                     PVHAATQRTVSLPATLARALEALSE"
     gene            16418..16906
                     /locus_tag="ACFJAG_000337"
     CDS             16418..16906
                     /locus_tag="ACFJAG_000337"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin family protein"
                     /protein_id="HFC3979728.1"
                     /translation="MKKILTAAAVALIGILLATVLIPDSKTAPAFSLPDLHGKTVSNA
                     DLQGKVTLINFWFPSCPGCVSEMPKVIKTANDYKNKDFQVLAVAQPIDPIESVRQYVK
                     DYGLPFTVIYDADKAVGQAFGTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAL
                     AQ"
     gene            complement(16987..17115)
                     /locus_tag="ACFJAG_000338"
     CDS             complement(16987..17115)
                     /locus_tag="ACFJAG_000338"
                     /inference="COORDINATES: protein motif:HMM:NF025953.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
                     /protein_id="HFC3979729.1"
                     /translation="MAGVTVGRGSVVGAGAVITKDIPPYSLAAGNPAVVKKNLPEG"
     gene            complement(17121..17531)
                     /locus_tag="ACFJAG_000339"
     CDS             complement(17121..17531)
                     /locus_tag="ACFJAG_000339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-o"
                     /protein_id="HFC3979730.1"
                     /translation="MESKFFFLLLRFAGSVLPPSHMRGIGIIGRRVLGFLARRISPHI
                     GRGAYVFPDTVLGDGSGRGAYVFPDTVLGDGSGIGANCEICRGLVVGKNVMMGPECLL
                     YSTNHKFDREKNALRATRKSVRLRWRTMSGRGAG"
     gene            17666..17881
                     /gene="rpmE"
                     /locus_tag="ACFJAG_000340"
     CDS             17666..17881
                     /gene="rpmE"
                     /locus_tag="ACFJAG_000340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003681847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HFC3979731.1"
                     /translation="MKQGIHPNYREVNVTCSCGNKFVTKSAMEKENFNIEVCSLCHPF
                     YTGTQKIVDTTGRVDKFNNKFGNLFKR"
     gene            18146..18774
                     /locus_tag="ACFJAG_000341"
                     /pseudo
     CDS             18146..18774
                     /locus_tag="ACFJAG_000341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244425.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="CadD family cadmium resistance transporter"
     gene            18919..20595
                     /locus_tag="ACFJAG_000342"
     CDS             18919..20595
                     /locus_tag="ACFJAG_000342"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ArnT family glycosyltransferase"
                     /protein_id="HFC3979732.1"
                     /translation="MLTYTPPDARPPAKTHEKPWLLLLMAFAWLWPGVFSHDLWNPAE
                     PAVYTAVEALAGSPTPLVAHLFGQTDFGIPPVYLWVAAAFKHLLSPWAADPYDAARFA
                     GVFFAVIGLTSCGFAGFNFLGRHHGRSVVLIHIGCIGLIPVAHFLNPAAAAFAAAGLV
                     LHGYSLARRRVIAASFLLGTGWTLMSLAAAYPAAFALMLPLPVLMFFRPWQSRRLMLT
                     AVASLAFALPLMTVYPLLLAKTQPALFAQWLNYHVFGTFGGVRHIQTAFSLFYYLKNL
                     LWFALPALPLAVWTVCRTRLFSTDWGILGIVWMLAVLVLLAFNPQRFQDNLVWLLPPL
                     ALFGAAQLDSLRRGAAAFVNWFGIMAFGLFAVFLWTGFFAMNYGWPAKLAERAAYFSP
                     YYVPDIDPIPMAVAVLFTPLWLWAITRKNIRGRQAVTNWAAGVTLTWALLMTLFLPWL
                     DAAKSHAPVVRSMEASFSPELKRELSDGIECIGIGGGDLHTRIVWTQYGTLPHRVGDV
                     RCRYRIVRLPQNADAPQGWQTVWQGARPRNKDSKFALIRKIGENILKTTD"
     gene            20802..21407
                     /locus_tag="ACFJAG_000343"
     CDS             20802..21407
                     /locus_tag="ACFJAG_000343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HFC3979733.1"
                     /translation="MMTLYSGITCPFSHRCRFVLYEKGMDFEIKDIDIYNKPEDLAVM
                     NPYNQVPVLVERDLVLHESNIINEYIDERFPHPQLMPGDPVMRGRGRLVLYRMEKELF
                     NHVQVLENPAAANKEQAKAREAIGNGLTMLSPSFSKSKYILGEDFSMIDVALAPLLWR
                     LDHYDVKLGKSAAPLLKYAERIFQREAFIEALTPAEKAMRK"
     gene            21479..21871
                     /locus_tag="ACFJAG_000344"
     CDS             21479..21871
                     /locus_tag="ACFJAG_000344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ClpXP protease specificity-enhancing factor"
                     /protein_id="HFC3979734.1"
                     /translation="MPTSTKPYILRALCEWCSDNSLTPHILVWVNEHTRVPMQYVRDN
                     GIMLNIGATATQNLRIDNDWISFSARFGGQAHDIWIPVGHVLSLFARETGEGMGFELE
                     EYRPDTPSENTSAETAPRPAKKGLKLVK"
     gene            21876..22022
                     /locus_tag="ACFJAG_000345"
     CDS             21876..22022
                     /locus_tag="ACFJAG_000345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012504115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979735.1"
                     /translation="MPSERNRVSDGILSDGAQTESVCRQNLFRRIETVLPLPIRYWDI
                     ENAV"
     gene            complement(22070..22516)
                     /locus_tag="ACFJAG_000346"
     CDS             complement(22070..22516)
                     /locus_tag="ACFJAG_000346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HFC3979736.1"
                     /translation="MSLKTRLTEDMKTAMRAKDQVSLGTIRLINAAVKQFEVDERIEA
                     DDAKITAILTKMVKQRKDGAKIYTEAGRQDLADKENAEIDVLHRYLPQMLSAGEIRTA
                     VEAAVAETGAAGMADMGKVMVVLKTRLAGKADMGEVNKILKTVLTA"
     gene            complement(22648..22860)
                     /gene="rpsU"
                     /locus_tag="ACFJAG_000347"
     CDS             complement(22648..22860)
                     /gene="rpsU"
                     /locus_tag="ACFJAG_000347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011484193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HFC3979737.1"
                     /translation="MPAIRVKENEPFEVAMRRFKRAVEKTGLLTELRAREAYEKPTTE
                     RKRKKAAAVKRLQKRLRSQQLPPKMY"
     gene            complement(23150..25000)
                     /gene="ltgA"
                     /locus_tag="ACFJAG_000348"
     CDS             complement(23150..25000)
                     /gene="ltgA"
                     /locus_tag="ACFJAG_000348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase LtgA"
                     /protein_id="HFC3979738.1"
                     /translation="MYLPSMKHSLPLLAALVLAACSSTNTLPAGKTPADNIETADLSA
                     SVPTRPAEPEGKTLADYGGYPSALDAVKQNNDAAAAAYLENAGDSAMAENVRNEWLKS
                     LGARRQWTLFAQEYAKLKPEGRAQEVECYADSSRNDYTRAAELVKNTGKLPSGCTKLL
                     EQAAASGLLDGNDAWRRVRGLLAGRQTTDARNLAAALGSPFDGGTQGSREYALLNVIG
                     KEARKSPNAAALLSEMESGLSPEQRSFAWGVLGHYQSQSLNVPAALDYYGKVADRRQL
                     TDDQIEWYARATLRARRWDELASVISHMPEKLQKSPTWLYWLARSRAATGNTQEAEKL
                     YKQAAATGRNFYAVLAGEELGRKIDTRNNVPDAGKNSVLRMAEDGAIKRALVLFQHSR
                     TAGDAKMRRQAQAEWRFATRGFDEDKLLAAAQTAFDHGFYDMAVNSAERTDRKLNYTL
                     RYISPFKDTVIRHAQNVNVDPAWVYGLIRQESRFVIGAQSRVGAQGLMQVMPATAREI
                     AGKIGMDAAQLYTADGNIRMGTWYMADTKRRLQNNEILATAGYNAGPGRARRWQADTP
                     LEGAVYAETIPFSETRDYVKKVMTNAAYYASLFGAPHIPLKQRMGTVPAR"
     gene            25076..25213
                     /locus_tag="ACFJAG_000349"
     CDS             25076..25213
                     /locus_tag="ACFJAG_000349"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979739.1"
                     /translation="MNYMPKLHRLWNVSDIIYSGLNLNQYGVASPCRTICTVCGFVAL
                     S"
     gene            25481..26218
                     /locus_tag="ACFJAG_000350"
     CDS             25481..26218
                     /locus_tag="ACFJAG_000350"
                     /EC_number="7.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0033232 - ABC-type D-methionine
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0048473 - D-methionine transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein"
                     /protein_id="HFC3979740.1"
                     /translation="MIILDKVSKHYQTRDKTRFAAVEPTSLEIQDGEIFGLMGYSGAG
                     KSTLLRLINLLERPDTGKVNVCGQELTALDAAALRQARQNIGMVFQQFNLLSNRTVAG
                     NVAFPLEIAGWPSEKIKARVAECLEIVGLTERAGHYPAQLSGGQKQRVGIARALAPKP
                     QVILADEPTSALDPATTRSVLECLEDINKRFNVTIVIVTHEMSVIRRLCDRAALLDKG
                     KVVEIVEVRGNQIHAQSEIGRELIRED"
     gene            26220..26906
                     /locus_tag="ACFJAG_000351"
     CDS             26220..26906
                     /locus_tag="ACFJAG_000351"
                     /EC_number="7.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033232 - ABC-type D-methionine
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0048473 - D-methionine transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter permease"
                     /protein_id="HFC3979741.1"
                     /translation="MADLTFEQAVSTIVGMKDEIVRALGETFVMVGLSTTFAVIFGTL
                     LGVLLFVTSSRQLHYNKPVNFLLDNLVNLMRAFPFVILMIAMIPATRAIVGSTIGPVA
                     ASLVLSVSGLFYFARLVEQNLREVPKGVIEAAAAMGAPPIAIVLKVLLNEARAGMVSS
                     ITVLAIGLLSYSAAAGMIGGGGLGDLAIRYGYYRYQTEVIVFIVALLVLLVILIQSTG
                     NALARKLDKR"
     gene            27065..27931
                     /locus_tag="ACFJAG_000352"
     CDS             27065..27931
                     /locus_tag="ACFJAG_000352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HFC3979742.1"
                     /translation="MKTFFKTLSAAALALILAACGGQKDSAPAASAAAPSADNGAAKK
                     EIVFGTTVGDFGDMVKEQIQAELEKKGYTVKLVEFTDYVRPNLALAEGELDINVFQHK
                     PYLDDFKKEHNLDITEAFQVPTAPLGLYPGKLKSLEEVKDGSTVSAPNDPSNFARALV
                     MLNELGWIKLKDGINPLTASKADIAENLKNIKIVELEAAQLPRSRADVDFAVVNGNYA
                     ISSGMKLTEALFQEPSFAYVNWSAVKTADKDSQWLKDVTEAYNSDAFKAYAHKRFEGY
                     KYPAAWNEGAAK"
     gene            complement(27994..28563)
                     /locus_tag="ACFJAG_000353"
     CDS             complement(27994..28563)
                     /locus_tag="ACFJAG_000353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HFC3979743.1"
                     /translation="MVRRLIIGISGASGFQYGVKALELLRAQDVETHLVVSKGAEMAR
                     ASETDYTKDEVYALADFVHPIGNIGACIASGTFKTDGMLVAPCSMRTLASVAHGFGDN
                     LLTRAADVVLKERRRLVLMVRETPLNLAHLDNMKRVTEMGGVVFPPVPAMYRKPQTAD
                     DIVAHSIAHTLSLFGIDTPDLAEWQGMAD"
     gene            28721..29581
                     /locus_tag="ACFJAG_000354"
     CDS             28721..29581
                     /locus_tag="ACFJAG_000354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HFC3979744.1"
                     /translation="MAKVKGGLGRGLDSLLANGADNSSGDRLTAVAVKDIRPGRYQAR
                     VQIDDEALQELADSIKAQGVIQPVIVREHGLSRYELIAGERRWRAAQIAGLSEIPAVI
                     KTISDETALAMGLIENLQRENLNPIEEAQGLKRLADEFGLTHETIAQAVGKSRSAISN
                     SLRLLSLPESVQEMLYQRRLEMGHARALLTLPVVEQLELAQKAVKNGWSVREVERRSQ
                     AALQNKRPEPKKTAAADIGRLNDLLTEKLGVNAEIKTANHKKGKIILHFDTPETFDHI
                     LKQLGIDYRP"
     gene            30255..30608
                     /locus_tag="ACFJAG_000355"
     CDS             30255..30608
                     /locus_tag="ACFJAG_000355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase subunit I"
                     /protein_id="HFC3979745.1"
                     /translation="MKQIIILQSAVLSICAAVAFAVWGFAGFLSAVGGGLSYLLPTFV
                     AVLLLKLFRGNPFLQSRMFVFGEILKVMLSLLSMLAVFAIWHQSLVFVPFLMGLLGVS
                     HLVFLVLLRVKDYGR"
     gene            30598..31464
                     /gene="atpB"
                     /locus_tag="ACFJAG_000356"
     CDS             30598..31464
                     /gene="atpB"
                     /locus_tag="ACFJAG_000356"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004464456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HFC3979746.1"
                     /translation="MAGETITAADYIKHHLQSLTSLSDVTQGQGLKNIADFSFINLDA
                     VFFAVLLGVIGSFLLWRGAKKATAGVPGRFQAAVEILFEFVDDMCKSIIHSEKSRKAV
                     APLGLTLFVWIFLMNAMDMLPVDLLPMVWQGITGNHHALLRIVPTADLNTALALAVGV
                     LLICIYYNIKIKGLGGWFHELFSVPFGAKLAPANFLLNLVEFLSKTVSHGMRLFGNMY
                     AGELVFLLIALLGGAWAASGSVEVMDPILFVFHIIAGLAWAIFHILVITLQAFIFMAL
                     AFVYIGQAHDAH"
     gene            31521..31757
                     /gene="atpE"
                     /locus_tag="ACFJAG_000357"
     CDS             31521..31757
                     /gene="atpE"
                     /locus_tag="ACFJAG_000357"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HFC3979747.1"
                     /translation="MGLIAIACGLIVALGALGASIGIAMVGSKYLESSARQPELIGPL
                     QTKLFLIAGLIDAAFLIGVAIALLFAFVNPFAGA"
     gene            31827..32297
                     /locus_tag="ACFJAG_000358"
     CDS             31827..32297
                     /locus_tag="ACFJAG_000358"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HFC3979748.1"
                     /translation="MNINATLFAQIIVFFGLVWFTMKFVWPPIAKALDERAAKIAEGL
                     AAAERGKSDFEQAEKKVAELLAEGRNQVSEMVANAEKRAAKIVEEAKEQASSEAARIA
                     AQAKADVEQELFRARESLRDQVAVLAVKGAESILRSEVDASKHAKLLDTLKQEL"
     gene            32302..32835
                     /locus_tag="ACFJAG_000359"
     CDS             32302..32835
                     /locus_tag="ACFJAG_000359"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HFC3979749.1"
                     /translation="MAEFATIARPYAKALFGLAQEKNQIESWLGGLEKLAAVVQEGKV
                     ASLIDRPETNASEKADILIDLVGLKDKELKNFVIVLAGQKRLSILPEVYAQYQDLTLS
                     FNHIKSAVIYSAYPLTDKQVGELAQMLNKRFDSELKISVEIEPELIGGIKVEVGDQVL
                     DLSVQGKLSALYTTMTN"
     gene            32846..34393
                     /gene="atpA"
                     /locus_tag="ACFJAG_000360"
     CDS             32846..34393
                     /gene="atpA"
                     /locus_tag="ACFJAG_000360"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HFC3979750.1"
                     /translation="MQLNPAEISDLIKAKIENLSVNAEVSTRGTVISVTDGIVRIHGL
                     SDAMQGEMLEFPGNTLGLAMNLERDSVGAVVLGEYEHIKEGDTVTCTGRILEVPVGRE
                     LVGRVVDALGRPIDGKGPINTTLTAPVEKIAPGVIARKSVDQPMQTGLKAIDSMIPVG
                     RGQRELIIGDRQTGKTAVALDAIVNQKGTGVICIYVAIGQKASSIANVVRKLEEHGAM
                     EHTIVVAATASEAAALQYIAPYSGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLL
                     LRRPPGREAYPGDVFYLHSRLLERAARVNEHEVEKLTNGEVKGKTGSLTALPIIETQA
                     GDVSAFVPTNVISITDGQIFLETDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLGGG
                     IRLALAQYRELAAFSQFASDLDEATRKQLEHGEVVTELMKQKQFSTLNTAEMALTLWA
                     INNGSYSDVPVAKALAFESEFLSFVRTQHPEVLEAVNASGAMSDESEKTLEAAMKSFK
                     SSYAYQA"
     gene            34418..35293
                     /gene="atpG"
                     /locus_tag="ACFJAG_000361"
     CDS             34418..35293
                     /gene="atpG"
                     /locus_tag="ACFJAG_000361"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HFC3979751.1"
                     /translation="MAVGKEILTKIRSVQNTQKITKAMQMVSTSKMRKTQERMRLARP
                     YAEKVRMVMSHLAQTNTDHGIPLLESHREIRRVGFILITSDKGLCGGLNANVLKKFLA
                     QVQEYRNQGIEEEIVCLGSKGLMACQSIGLNVVASAVNLGDTPKMEMLLGPLTELFQR
                     YEKHEIDRIHLVYSGFVNTMRQEPRMEVLLPIGENVIGDSAPKSPFSWEYRYEPTALA
                     VLEYLVRRYLESVVYQALSDNMASEQAARMVAMKAATDNAGNAIKELRLVYNKSRQAA
                     ITTELSEIVAGAAAV"
     gene            35331..36728
                     /gene="atpD"
                     /locus_tag="ACFJAG_000362"
     CDS             35331..36728
                     /gene="atpD"
                     /locus_tag="ACFJAG_000362"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HFC3979752.1"
                     /translation="MSQGKIVQIIGAVVDVEFPRDMIPRVYDALKLDENGLTLEVQQL
                     LGDGVVRTIAMGSSDGLKRGMTVSDTGSPITVPVGKGTLGRIVDVLGTPVDEAGPIDT
                     DKSRAIHQAAPKFDELSSTTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMME
                     LINNIAKAHSGLSVFSGVGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRV
                     ALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTL
                     AEEMGRLQERITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLG
                     IYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDIIAILGMDELSDEDK
                     LAVMRARKIQRFLSQPFHVAEVFTGSPGKYVALRDTIAGFKAILNGEYDHLPEQAFYM
                     VGSIEEAVEKAKTLN"
     gene            36739..37161
                     /locus_tag="ACFJAG_000363"
     CDS             36739..37161
                     /locus_tag="ACFJAG_000363"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HFC3979753.1"
                     /translation="MSIMQVEVVSGEQKIYSGEATFIVVPTVQGELGIYPRHEPIMSL
                     VRPGALRLTVPGEDKEVLVAVSGGILEVQPDKVTVLADVAVRSAEMDRARAEEAKKAA
                     EAGISQAKDDKALAEAHKALAAAIAQLKTLDYIRSHKK"
     gene            37333..38229
                     /gene="glyQ"
                     /locus_tag="ACFJAG_000364"
     CDS             37333..38229
                     /gene="glyQ"
                     /locus_tag="ACFJAG_000364"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HFC3979754.1"
                     /translation="MLTFQQIIFKLQTFWADKGCTVIQPFDMEVGAGTSHPATCLRAL
                     GPEPWFAAYVQPSRRPKDGRYGDNPNRLQHYYQFQVALKPAPANIQDLYLDSLRELGI
                     DPKVHDIRFVEDDWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGIDCTPVLGEITY
                     GIERLAMYLQGVENVYDLVWAKTPDGNTVSYGDVYHQNEVEQSTYNFEYSDADWLLRQ
                     FNDYEAQAKRLFAEENADLALPAYELVLKAGHTFNLLDARGAISVTERATYIGRIRAL
                     SRAVAQKYIESREKLGFPLIKK"
     gene            38346..40409
                     /gene="glyS"
                     /locus_tag="ACFJAG_000365"
     CDS             38346..40409
                     /gene="glyS"
                     /locus_tag="ACFJAG_000365"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HFC3979755.1"
                     /translation="MTTQTLLIELLTEELPPKALNNLGNHFAASVAEGLEKAQLVDGA
                     AEFTAYASPRRLAVQVKNVKAVQADQKIVKKGPAVANAVKDGAPTKALEGFARGAGAK
                     IEDLTIVHDGRQDVYAYEYVQTGKPLGGLLEDIINQAVKKLPIPKVMRWGSSTFTFVR
                     PVHGLIVLHGGDVVNVSVLGLQSGNQTLGHRFLSDGEIIIENADSYAAQMRGQGKVVA
                     SFAGRKAAIQTALEGQARRLNATVAADEALLDEVTALVEWPVVLEAGFEEHFLAMPQE
                     CLILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTEDPSHIIRGNERVLRARLSDAEFF
                     YKQDQKATLESRLPKLANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAAR
                     LAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDKLPESKIA
                     AAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFD
                     SFPQGLLNEKTPSETADFMQARLAVLLQNDYPQDIVAAVLAKQPRRLDDLTAKLQAVA
                     VFKQLPEAAALAAANKRVQNLLKKADAELGAVNESLLQQDEEKALYAAAQGLQPKIAA
                     AVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAGQMNAVADI
                     ALLGE"
     gene            40473..>40688
                     /locus_tag="ACFJAG_000366"
     CDS             40473..>40688
                     /locus_tag="ACFJAG_000366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HFC3979756.1"
                     /translation="MQPLVSVLICAYNVEKYFAQSLAAVVNQTWRNLDILIVDDGSTD
                     GTLAIAKDFQKRDSRIKILAQAQNSGLI"
BASE COUNT         9021 a        10860 c        11163 g         9644 t
ORIGIN      
        1 tttttggttt tctgtccttg tgggaatgat gaaattttaa gttttaggaa tttatcggaa
       61 aaaacagaaa ccgctccgcc gtcattcccg cgcaggcggg aatccagccc cgtcggtacg
      121 gaaacttatc ggataaaacg gtttctttag attttacgtt ccggattccc gctttcgcgg
      181 gaatgatggg attaaagttt caaaatttat tttaaataac tgaaactcaa cgaactggat
      241 tcccactttc gtgggaatga cgaattttag gttgctgttg tttcggataa gttcctgtgg
      301 ctttgcgttt ctagattccc acttccctgg gaatgacgga gagttgcggg aatgacggag
      361 agttgcggga ttgggcttgg tacaagcctg aaagggggcg gcggtgcgac cgtaaaaaat
      421 gccgtctgaa acccaaatca tcgggtttca gacggcattg gcacatcagg agcttagaac
      481 ttcgcttcga tggtgaaatt gtagctcctg cccggcgagg taaagcgttg gatgccggcg
      541 tgggttttgt tgtcaacgcg gttgaccgtg ccgaactcgc ggacgctgcg taaagattcc
      601 caagtgtagt actgcttgtt ggtaatgttg tacgcggcgg cgcggagcgt aacctgtttg
      661 ccgatgttga ggtaggcgga aaggtcgaac agcgtatagg ccttgctgtg tttggcataa
      721 ggccacggtt tgttcaagtc gtcgttgctg tggacggtgt cggacggctt tttggcggcg
      781 gtgcgcgcgg cgtaggcgtt gacgccccag cgtttggaag gcgcgtcata gcccaggctg
      841 taaaccgccg tccacggcga aagcgcgttg atgggcgttt ctttgccgtt gttttgcgtt
      901 gccttgccct tgatgtagct gacgttgagg ccggtgtgca gccctttggg cagcccgatg
      961 ctgtcgaggt tccaagtgcc gttaaactct atgcctttca cccaggcggc ggtgcggttt
     1021 tggttttgcc aaacgggcga gctgaccaat gccgtgccgt ctgaaagcgg ggcgtatctg
     1081 gggttgtttt tatcgtctga cgaaacgccc atatacgtca attcgataaa gtcgcggtat
     1141 ttggttttga agcccgaaag cttgaagctg ccagctttgc cgctgcccgc caggcccaat
     1201 tcccagtttt tggctttttc cgctttcagt tcgggattgg ttttcaggta gaaatcgggg
     1261 tgtgggaaca gcagccaggt ttcgtccgaa gtcggtgcgc ggaagccggt gctgtatttt
     1321 gccaacaagt gcagatgctt ggtaaaccgc cagtcgaacc ctgtgccgta gctgaagccc
     1381 gcgtgcgcgc gttccgaacc caaatgggga atctgccccc ggatggcggt ggtgtatttc
     1441 ggatcgtctt tcgcgctgct gctgtttttg tcgtagcgta tgcccgcatt caggcggaag
     1501 cggtcgttgc cgcccaagtg aaacacattg ttccaatagg caaatttata tttcgaccgg
     1561 ttttcgatca gcatcgtgat tttggcttgg ttggaagcga ggattttggg gtcgtacagt
     1621 tttgcgaaat aactgtaatc cgagttggca ttgtcccctc tgccgccgcc taagccgtat
     1681 tgcgccgccc aaacggcttt ggaaaagtcg agttgttttt caaaatcggc agtccattgc
     1741 gcggtgtttt ggcggatatg ccggaacgaa tggtaaacct cgccgttgat gccgtttgta
     1801 tcgtaatttt tcgggatgtc ccaagtccaa gtgttcatat cgatgcgctg cttgtcgtag
     1861 cgcagcttga ggctgtccca cgggccgtgt tccaattcgt ttttgtattc gacgccggtg
     1921 cggcggcggt agctcacgtc ttggcggtgg cggtagtcgc ccgttgcggc agacgtggtc
     1981 gtacccgtcc acaaattaga cagctcgttg gtaaaacggt cggtgcgcga gtcttcaaaa
     2041 atccagccga tgcggttgcg gtcgttgaaa ttgtagccca gcttgaacag ggtgcttttg
     2101 tttacccatt cttgcgggtc gggttgggag cgagcaaccc ctgtggcttt gtaggtaagg
     2161 tatctgctgg gcgaggggtt ggccgggtca aagacatatc cgtcgttttt aatttcgaca
     2221 tcgccctcgg tcgagcggtt tttggtttct ttgccgaagc ggcgggtata aaccaataag
     2281 gcatccaaac caaagagcct gccggcggcg gtaatgctgc tgaatttttg gctgtttttg
     2341 ccgacgctgc cgccctttat ccccaaatgg tagggcttgt cttcggaaac atagtcgctt
     2401 gcggatttgg tttggtaatt gactgcgccg cccaatgcgc cgctgccgga tttgagcgag
     2461 tccgcgcctt tggtgatggt tacttcggaa aagttttccg gctcggaagt gttgcggttg
     2521 gcgttgaagt tgccgtacgc gccgaacaat tcttggaagg cttcggaaga gcggctttcc
     2581 gcctgcgcca gcccgtcaac gttgatggcg acgcggtctt tgtccacgcc gcgtatggta
     2641 aagccgttag aacccgccct gccgccttcg acgacggaaa tgccggggtc gtagcgcacc
     2701 aggtcgtgtt cgtcgttggc caagagcttg tctaaggttt tgcggcggat tttttcttcg
     2761 ccgagttttt gggttttgtg cgtgccggta acggtgattt cgttcagcgt ttgggcggac
     2821 tgcggcgcgg ggtctgccgc aaaggcggga aacgcttggg cgatggcggc ggcagccaat
     2881 acgggtttga agggaatggg cataagaaac ctttgcaggg atgaggtggt ttattgttta
     2941 gtaaggtggt tggtatcttg actggtgtca tcaagttttt tttcataact cacaccgccg
     3001 aatacggtat cgagggagcg gtcgccgtca aaggtgattt tgccgcctat gctgacttcg
     3061 ctgctgcggg tgctggcgaa cttgccaaaa aacttgcctt ccaatttgcc gcttttcccg
     3121 ccggacgtgg catcgccgga aaaggtcgga ccggtaatcg ttgcgttttg aatatccaca
     3181 tccggcccgt aatcgctgtt gccgaggatt ttgcctgcca gtgtgttgct gttgaaattg
     3241 gcggtgataa aggaaaggac gggggtattg gcaagtgtcc cataataaga accgcttttc
     3301 ggcggcgtat aagaggaagt aacaaattgc ccgtttctga cgcggatgcc ccaaacctga
     3361 taagtgattt taccctttga caatgcggtt tcgggcgtgc tgctgccgta ggagaacgca
     3421 ggaggcggcg ttttgccgac ggggaagccg ccggcgaaga ggtcgatttc gccgttggga
     3481 cctatccacg ccccgaattt catataatct tgtttggtaa tttccgcata cgaagtagcc
     3541 ccggagtcgc tgcagcagat aaagatgcgg ctgccgtcgg cgagccgctg ccctgcgtgg
     3601 cggtcgggaa ttttgaaatc gggggaggag tagctgacgg ttatggggtc ggcgtaggat
     3661 gaaagggcgt attgcgcgcc gccgggtgtt ttgaagatga atgatgtttc ttttgattta
     3721 tagccgaaat agtctttttc tacttcccgc tgccgaatgg aaatgccgga tgtgttttgc
     3781 ggggcggcat cgagcgagcg tctgctgcgg ctcggcgcgt cggatgcgct tccggcgccg
     3841 gcggtgttga tgttttcgat attgccgtta tcgcttgata acgttacctc gccggcgggc
     3901 agcggcgtgg cggtggggat ggacacgggg acgtgcggtt cggctacccc cccccggcac
     3961 aggcggcaag ggcggcggca agcggcagta agggcagggc tttgtatttc atcgcatact
     4021 caatcttgat gatgtattaa taatagtttt gattatcaat ttaaatgtta tatgatgtca
     4081 actgttttat ggggcggcgc ggaaatcgga cgtgcctgcg tttgtctgcc gcgtttctac
     4141 ctttgttttt tatagcggat taacaaaaac cggtacggcg ttgcctcgcc ttgccgtact
     4201 atctgtactg tctgcggctt cgtcgccttg tcctgatttt tgttaatcca ctatatgatg
     4261 cgccgcgtcc gccgcgcgtg gggcttgcgg cgtttctgcc gccgccgtcc ggcggtgttt
     4321 tttaaggaag gcaaattgaa ggatagtgtg tatcgggtat gccggctgtg tgccgcgctg
     4381 tgtgtttggg gtgcggtcgg cgcgtatgcc gccggcttgc ccgacgttcg ggacgatgcg
     4441 gcggcgttgc gcgcccagcg tgcggctgcg gagggttggg cgggaatgcc gccggaaggg
     4501 gattctgccg caaacggcgg ttcgcgcgta atcgacgggg atttcctgct gtcgcgcccg
     4561 cagttgttgg aacacgtttt gcgcgacgcg ctcaacggca atcaggcgga tttgatcgct
     4621 tcgttggcgg atttgtatgc caagctgccg gattatgatg cggtgttgta cggcagggcg
     4681 cgggctttgc tggcgaaatt ggcgggaagg ccggcggagg cggtggcgcg ctatcgggcg
     4741 ttgcacaggg ataatgcggc agacgagcgg gttttgctgg atttggcggc ggcggagttt
     4801 gacgatttcc ggctgaagtc ggcagggctg cattttgcgg aggcggcaaa attggatttg
     4861 ccggcgccgg ttttggaaaa tgtggggcgt ttccggaaaa aaacggaggg gctgacgggc
     4921 tggcattttt cgggcggcat cagcccttct gtgaacaaaa acgccaacaa tgccgcgccg
     4981 caatactgcc tgcagggcgg cggcagccgg atatgcagcg ttaccggacc tgtccgtgcg
     5041 gcagggttgg attatgaggc cggggcggaa aagctgactg cgctggcgga caaccattat
     5101 ctgctgttcc gcgccaatgt cgggggcaca agctattatt tcagccgcaa atcggcttat
     5161 gacgatgctt tcggcagggc ttatttgggc tggcagtata aaaatgcgcg gcagacggtg
     5221 ggggttttgc cgttttatca ggcgcaattg tcgggtagcg acggctttga tgcgaaaacg
     5281 aaaccgcctg ccgaccgccg gcttgcgccg tatatgctgg cgcacggggc gggtgtgcag
     5341 ttggcgcatt cttaccgcct gagccgccgg tcgcagcttt cggtgtcgct ggaacgttac
     5401 cgccaacgct accgcgaaca aggccgggcg gaacgcaacg acggttggca ggacgggctt
     5461 tatgtgtcgc tggcaaggcg gttgggcggc tcggcaaccg tgttcggcgg ctggcagttt
     5521 gcgcggtttg tgccgaaacg cgaaacggtg ggcggcgcgg tcaacaatgc cgcctaccgc
     5581 cgcaacgccg tccatatcgg ttgggcgcag gagtggggcg ggacgggcgg tttgaacagc
     5641 cggattgccg cgtcttacgc ccaccgcaac tacaaaggca ttgcggcatt ttcgacggag
     5701 gcgcagcgta accgcgaatg gaatgtctcg ctggctttga gccacgacaa gttgtcgtac
     5761 aaaggcatcg tgccgacgtt gaactaccgc ttcggtaaga cggaaagcaa tgtgccgtat
     5821 gcaaaacgcc gcaacagcga ggtgtttgtg tcggcggatt ggcggttttg aatggtggga
     5881 taatgccgtc cgaactttgc ggcagcaggt tcggacggca tttttgcgcg ttcaggcaag
     5941 gacggcggca aatacgccgc gcaaggcgtt ggagaggcgg atttcttcgg ccccttgcag
     6001 tgttttttgt gtgatgtgtg tttcaatcac ttgatttgtg tgcaaatatt tttgcggttc
     6061 gtccgacacg gcttggcgca ttatgccgtt taaaatgtct aaatctaaag agggcgtgag
     6121 ccattgtccg cgatgtttga cgaacacgtt gctcctgccg ccttcgagta ggatgccgtc
     6181 cgaattgaaa aacaggctgt cgaacgcgcc ttgcgtttcg gcggtttgcc acgcttggtc
     6241 gaagatggcg cggtgtgtgg ttttgaagcg gcgcaggtag ttttgtgcgg gcaggatggt
     6301 cggcgaaatg atgacgcgct gtttgtcggt cagacggttt aaaacggcgt gggacaggct
     6361 gatgccgtct gaagcgagca gggctttgat gcggaacgcg ccgtcgggca agtcggcaat
     6421 gtattgtttg atttgatttt cgcagccgtc gggcaggggc aggttgaggg cttgggcgga
     6481 ggttttcaga cggcataggt ggcggtcgag cagggcgcat tgcctgtttt ccgcgcgcag
     6541 ggtttcaaaa atgccgaaat cggggcgcag ttcgttgagg aatcgggctt tccagccgca
     6601 ttcgcgatat tcggcggcgg ggtcgctgtc gatgacgatg ccggaaccga caccgtacac
     6661 gccccgatac ggcggattgg cttcaaacgg atgcggcgtt tccccgcctt gtcctgccgt
     6721 tcgggcttgc gcgtttgaat ccgtgccgcc gatgcctgaa acaatgccgt ctgaaacggg
     6781 tttgagcgac agggtgcgga tgacgacgtt gaacgcgcct tcaaacccca agccgccgga
     6841 acacgggttc aaatagccga tgctgcccgt ataaagcccg cgcgcttcgg tttcgagcga
     6901 ttcgataatc tgcatactca tttttttggg cgcgccggtg atgctgccgc aggggaaggc
     6961 ggcgcggagg gtgtcggcga acgaggtgtc cggcagggct tgcgcccgga tggtgctggt
     7021 catctgccag acgctgccga aacgcgatac tttaaacggc tcgggtacgc atactttacc
     7081 ggtttgggcg attttgccga ggtcgttgcg cagcaaatcg acaatcatca cgttttcggc
     7141 gcggtttttc gggtctgctt gcaactcggc ggcgcggcgt tcgtcttgtc cgtcgcccaa
     7201 aatcggcgcg gtgcctttca tcggttcggt gctgatgatg ccgtctgaag cgatgttgag
     7261 gaagagttcg ggcgagaaac acagcgtcca cgcggattgc ccggcttcat cgggcaggtg
     7321 ggacaatacg gcatagggga cgggctggcg caggcggcgg tagaggctga cggggttgcc
     7381 gtaggcttgc aggtgcaggc gggtggtgta gttgatttga taggtgtcgc cgcgccggat
     7441 ggcttcgtgg atttggcgga tgcggtcgag gtaatcggtt tcggatacgg aggattgcgg
     7501 cgtggaaata ccggcgggga tgccgtctga atgtcgggca agccagcttt cggcatcggt
     7561 gtcggcgcag tcggcaaacc agtgcagggc aatgttgccg ccgcgttcgg attccatccc
     7621 catcagcggc aaaccgaatt cgtagtctgc aaacaacacc gaatgcagcc ctttttgcca
     7681 tcccgattgc agcgcgccgt ctaaagcatc gagttcttcg ggacggaaaa aacggctttc
     7741 cacatgattt tgatagagtt ttgcgcggcc gcttacggca tcgtcaaaca gggcgaaata
     7801 aggcatggca attcggggca aatgttttga ttatacgccc cttttacacg gatttccaga
     7861 cggcggggca aggcaaaatg taattttatg tagagaaagc ggtggcgaaa gtgtaaaatt
     7921 gtgaaaacgg actttcattt ccaacctgaa atacaatagg agacctttat ggcagaccgc
     7981 cagttgcaac cgtttgaaaa cgtagaatta ggcgaaaagc aagaccagct ccaggtattt
     8041 gaaaaagctg ttttggaaca tgaaggcaaa ggttctgccg aagattccgg cacggccccg
     8101 ctgcccgaaa actacccctg ccgcaaacgt atgctccgcg ccgcctacga agccgaaaaa
     8161 gccaaactgc aaatcgaatt gctgaaagtg caaagctggg tcaaagattc cggccagcgc
     8221 atcgtcagcc tgtttgaagg ccgcgacgcg gcaggcaagg gcggcgccat caaacgcttt
     8281 atggaacatt taaacccgcg cggcgcgcgc gtggtcgctt tggagaaacc gactgacacc
     8341 gaacgcggac aatggtattt ccaacgctac atccaaaacc tgccgactgc gggcgaaatg
     8401 gtattcttcg accgctcgtg gtacaaccgc gccggcgtgg aacgcgtgac gggcttctgc
     8461 gaacccaacg aagtatatgc tctttatgcg ccaagcccct gagttggaac gtatgcttgt
     8521 cgccagcggc atccacctgt tcaaattctg gttctccgta tcccgcgaag aacaactgcg
     8581 ccgcttcatc tcccgccgcg acgacgccct gaaacactgg aaactttccc ccgtggacat
     8641 ccagtcgctc gaccgctggg acgactacac cgaagccaaa aacgcgatgt tcttccacac
     8701 ccacaccggc gacgcgcctt gggtcatcat ccgttcggac gacaaaaaac gcgcccgttt
     8761 gaactgtatc cgctacttcc tgcaccagtt ggactacccg ggtaaagacg tgaaagccat
     8821 cggcaaagtg gacgataaaa tcgttcttgt tcccgatacg cgttacaaag agaaaaccat
     8881 cgatgtcggt catgactgat tgccggtgaa gtaataaaaa tgccgtctga acccgatttc
     8941 aggttcagac ggcattttct atccgtgtgt caaaccggca tcagatgtcg gtttccagat
     9001 aaatgacttg ggtttgcagg tattcttcca aaccgtgttt gccgtccgcg ccgccgatgc
     9061 cggatttttc ccagcccgcg tggaagccct gcatggcttc gaagttttcg cggttgatgt
     9121 aggtttcgcc gaattgcagg cggcgggtaa cgtagaaggc ttcgttcagg ttggtggtgt
     9181 acacggagct ggtcagaccg aattcgcagt cgtttgccag ggcgatgacc tggtcgagcg
     9241 tgtcgaaagc ggaaacgggc agcacgaggc cgaaagtttc ttctttcata atgtccatac
     9301 tgttgtcggt gtcggtcagc agggtaggct cgaagaaata gccgcgtcct tcggtgcgtt
     9361 tgccgccgca aaccaatttc gcaccttgtt tgacggcccg ttccactttt tcggcaacgg
     9421 ctttgacggc gcgctcttca atcagcgtgc ccatttccgg cgcgcctgct tcggcttcgg
     9481 cagggttgcc gtagcgcacg cctttcatcg cggcggtcat tttttcaatg aacgcgtctt
     9541 tcaggctgct gtggacatag acgcgctcgg cgcagttgca gatttgaccg gtgttgccga
     9601 cgcgcgaagc caagatggat ttcaccgcta aatccaaatc cgcgtctttc aacacgatgg
     9661 cgggggcttt gccgccgagt tccagcgaga ctttggtgat gttggcggaa gcggcttcca
     9721 tcacttggcg acccgcttca accgagccgg tcaggctgac catatcgact tgcggatggg
     9781 cggacaaggc gttgccgatt tccgcacccg gaccgtccac cacgttgaac acgcctgcgg
     9841 gcagtccgac cgcatcgatg atttcggcga agatgtggca gttgatcggg gttacgctgc
     9901 tgggtttgac gacgatggtg ttgcccgtaa ccagatccgg gcccattttg cgggcgatca
     9961 ggaagaaggg gaagttccgc ggcaaaatgc cggcaatcac gcccagcgga cgtttgaacg
    10021 ataaaatgtt ttcgcgcggg cggtcgcttt ggatgatttc gccttcgtaa cggcgcgccc
    10081 attcggcttg gtaatcgaga tagtcggcag tgaacatcac ttccacacgc gccaagtctt
    10141 tggttttgcc gccttcggca acgatggtgt cggtcagctc gtcggcgcgt ccgcgtatgc
    10201 cttgggcgat tttacgcaaa tacgcgccgc gttcgaccgc aggcagacgc tcccaagccg
    10261 gttgcgccgc gcgcgccgcg gtcaacgtcc gccctgccgc ctttgggttc gcgggcgatg
    10321 gtttcttcgg tggacgggtt caatacgtcg cgccattcgc cgttgaaatc gttttcaaag
    10381 cgtccgttga tgtacatggc caattgtttc atttcgggcc ctccagtttt gtagtcggat
    10441 gtagttttgg tttattccca aataaattac cgtacaagtt tctttacacg cggattttgg
    10501 gtttcaagtc aaatacggct taccggtttt cttttttagt ttccgcaggc gtgctgccga
    10561 aatattgcct gaatgcctga ataaagctgg aaacgtggcg ctagccgcac aaatacgcgg
    10621 tttcgcccac gtttttgccc ccgttttgca acagatagag cgcgtgctgc atttgtttgt
    10681 ggtgcagcca ctcgcttgcc gtaatgccga aatggtcgcg catacggcgt tgcagcgtcc
    10741 tttcgctgat gttcagcgcg gctgtcagcc ggttgacttg gtgtgcgccg ccgtcgaacg
    10801 cggcattcag ggtgcggctg aagtcttcag acggcatagc gtctgcttcc gccgtttgcc
    10861 ccgccgccgg ctcgatgccg tctgaaaccg tgtcccacaa atccgacagc agccgcaaca
    10921 cgtccgcctc gcggcgcaat gtttcgccca aatgcccctt tgggacggtt tgcaggcagg
    10981 atgccgccaa gccgcgcagg tttgggggca aatcccatat cctgaccggt tcgcggtaaa
    11041 gcaggggtgc gaaacgcgcg tattccggac gcggcagcca ttgttccata cctttaatgg
    11101 tcattttgac cgttttgccg ccgcgataaa gatagcggct gaacaggact tcttccccga
    11161 cggcaattag gacaatcttg ccgccgtccg catcgatgcg gaagcggcgg cggttgatgc
    11221 cgaagtccaa acgcccttcc agcaacagca cgaacgacac ataaggttcg gcgaggcggc
    11281 tgctgcaaaa atcgcaccgt gccgttaccg taccgccgtg gatggaaatg ccgttggaca
    11341 aagtatcgaa acggtagctg ccctccacat aagccgccgc cgcttttgac cagattgacg
    11401 aaccggctgc tgttcaaatg ttctgctttc tccatagttt tctgataaag gttatcattt
    11461 gaaagataac atttttcgcc acagcaaaca atccgccgcc gacaaaggca ttttcacaac
    11521 acttgccgtc cgtatgccgt ctgaaaattg cccgtcttcc cgataagcct taaaatacac
    11581 gccgtcaaac ctaccgtccg cccgtacatg agcccatccc cctttatcga aatgaaagac
    11641 gtcgccttcg cgtatggcga ccgcccgatt ctgaacgaca tcaatttcag cattccgcaa
    11701 ggcaattttg ccgccgtgat gggcggttcg ggcagcggca aaaccacgct gatgaggctg
    11761 attacaggac agattcgtcc gcagtccggg caggttttga ttgaaggacg ggatttggcg
    11821 ggtttttcgg ctgacgaact ctacgaacac cgccgccgta tgggcgtatt gttccaacac
    11881 ggtgcgctgt ttaccgattt gtcggtattc gacaatatcg cttttccgat gcgcgaactg
    11941 acgcaacttc cggaagcggt tattcgcgat ttggttttgt tgaaattgaa cgcggtcggt
    12001 ctgcgcggcg tggaaaacct gatgccgtcc gagttgtccg gcgggatgtc gcgccgcgtc
    12061 gcgctggcac gcacaatcgc gctcgacccc gaaattatgt tgtacgacga accgtttacc
    12121 ggcctcgacc cgatttcctt gggcgtgatt gcccacttga tcagccgcgt caacaaggcc
    12181 ttgcgttcga ccagcattat ggtaacgcac gacattgaaa aatctttgga aatcgtcgat
    12241 caggtaattt tcttggcgca cggcgaaatt atgttctccg gctcgccgca ggaaatgcgc
    12301 gaactggatt cgccttgggt gcgccagttt gtcggcgggc tggcagacgg ccccgtggca
    12361 taccgctatc cggcgcaaac gtcgttgcag caggatttgc tcgggtaaat gagcaggtgc
    12421 cgtctgaaac cgttgaacct tacatataga aatttatgaa ttttatccgt tccgtcgggg
    12481 cgaaaaccct cggccttatt caacccttcg gcagtatcac gctgtttctg ctgaacattt
    12541 tggcgaaatc cggcacggct ttcgcccgtc cgcgcctgag cgtgcgccaa gtgtattttg
    12601 ccggcgtgct gtcggtgctg attgttgccg tttcggggct gttcgtcggt atggttttgg
    12661 gtttgcaggg ctatacgcag ttgtcgaaat tcaaatccgc cgatattttg ggctatatgg
    12721 tcgcggcttc tctgttgcgc gaactgggtc ccgtgttggc ggcgattctg tttgccagca
    12781 gcgcgggcgg tgcgatgacc agcgaaatcg gtttgatgaa aacgaccgga cagctcgaag
    12841 cgatgaacgt gatggcggtc aaccccgtcg cccgcgtggt tgccccgcgt ttttgggcgg
    12901 gcgtgttttc tatgccgctt ttggcttcga ttttcaacgt cgcgggcatt ttcggcgcgt
    12961 atttggtcgg cgtgagctgg ctgggtttgg acagcggtat tttctggccg cagatgcaga
    13021 acaacattac gatacattac gatgtaatca acggtttgat caaatccgcc gcgttcggcg
    13081 tggcggtaac gctgattgcc gtgcatcagg gcttccactg catcccgact tcggaaggca
    13141 ttttgcgcgc cagcacgcgc acggtggttt cgtccgccct gacgattttg gcggtcgatt
    13201 ttatattgac cgcgtggatg tttacagatt gacagactgt ctgaagacga aacgcggaac
    13261 atcggatatt caaggaactt taatgaaaaa gaacatattg gaattttggg tcggactgtt
    13321 cgtcctgatc ggcgcggcgg cggttgcctt tctcgctttc cgcgtggcgg gcggcgcggc
    13381 gttcggcggt tcggacaaaa cttacgccgt ttatgccgat ttcggcgaca tcggcggttt
    13441 gaaggtcaat gcccccgtca aatccgcagg cgtattggtc gggcgcgtcg gcgctatcgg
    13501 gcttgacccg aaatcctatc aggcgagggt gcgccttgat ttggacggca agtatcagtt
    13561 cagcagcgac gtttccgcgc aaatcctgac ttcgggactt ttgggcgaac agtacatcgg
    13621 gctgcagcag ggcggcgata cggaaaacct tgctgccggc gacaccatct ccgtaaccag
    13681 ttctgcaatg gttctggaaa acctgatcgg taaattcatg accagcttcg ccgagaaaaa
    13741 cgctgagggc ggcaatgcgg aaaaagccgc agaataaaca tacacatcca ttttcaggaa
    13801 agacatcatg aaaaaatcct ccttcatcag cgcattgggc atcggtattt tgagcatcgg
    13861 catggcattt gcctccccgg ccgacgcagt gggacaaatc cgccaaaacg ccacacaggt
    13921 tttgaccatc ctcaaaagcg gcgacgcggc ttctgcacgc ccaaaagccg aagcctatgc
    13981 ggttccctat ttcgatttcc aacgtatgac cgcattggcg gtcggcaacc cttggcgtac
    14041 cgcgtccgac gcgcaaaaac aagcgttggc caaagaattt caaaccctgc tgatccgcac
    14101 ctattccggc acgatgctga aattcaaaaa cgcgaccgtc aacgtcaaag acaatcccat
    14161 cgtcaataag ggcggcaagg aaatcgtcgt ccgtgccgaa gtcggcatcc ccggtcagaa
    14221 gcccgtcaat atggacttta ccacctacca aagcggcggc aaataccgta cctacaacgt
    14281 cgccatcgaa ggcacgagcc tggttaccgt gtaccgcaac caattcggcg aaatcatcaa
    14341 agccaaaggc atcgacgggc tgattgccga gttgaaagcc aaaaacggcg gcaaataacc
    14401 gacaaaccat accgtccgag ggcggtatgg gtttttcgaa caaacgctat gcatacagaa
    14461 ctcaaaaacg gaacactgca catcggcggc gacatcaccg tcaaaaccct gaccggggac
    14521 gcatttgggc gtttccggca acaatgccgt ctgaaagaaa ccattgccgt cgatttcgga
    14581 ggtgtcaaac gtgccgattc cgcctgcgtg tcgctgctgc tcgaagtgct gcgcggctgc
    14641 aaaggcagcg tcaggctgac cggcattccc gaatccgtgc gcgcgctgtc cgaactgtac
    14701 gaaatcaaag actggctgaa atcatgaaaa aaaccgccta cgccatcctc ctgctgatcg
    14761 ggttcgcttc cgcccctgca tttgcagaaa cccgccccgc cgacccttat gaaggctaca
    14821 accgcgccgt ttccaaattc aacgaccaag ccgaccgcta cattttcgcc cctgccgcgc
    14881 gcggctaccg caaagttacg ccgaaacccg tccgcgccgg cgtgtccaat ttttttaaca
    14941 acctgcgcga cgtggtcagt ttcggcagca atatcttgcg tttggacatc aaacgcgcaa
    15001 gcgaagacct cgtccgcgtc ggcatcaata ccaccttcgg tttgggcggg ctcattgata
    15061 ttgccggcgc gggcggcgtt cccgacaata aaaacacttt gggcgacacg tttgcctcgt
    15121 ggggctggaa aaacagcaat tatttcgtgt tgcccgtctt aggcccgtcc accgtccgcg
    15181 acgcgctcgg cacgggcatt acctctgttt atccgcccaa gaatatcgtt ttccataccc
    15241 ctgccggacg ctggggcacg actgccgctg ccgccgtcag tacgcgcgaa ggcctgctcg
    15301 atttgaccga cagtctggac gaagccgcca tcgacaaata cagctacacg cgcgacctct
    15361 atatgaaagt ccgcgcacgg cagaccggtg caacacctgc cgaaggtacg gaagataaca
    15421 tcgacatcga cgaattggtc gaaagtgccg aaaccggcgc ggcagagccc gccgttcacg
    15481 aagattccgt atccgaaaca caggcagaag cagcagggga agccgaaacg caacctggaa
    15541 cacaacccta aagccatgcc gtctgaaaat ccgtgttcgg acggcattcc cttccgtcgg
    15601 aacggacagt ccgacactac agattgggct ataatccctt ttttgcgcat accgcgcgac
    15661 agcaaaggaa aaaccatgta cgaagtcaac cgcagcgtat tcgtcctcat ccctttagaa
    15721 cctttttgga actggctgca aaccctgccg ggcaaccacc tcgacggact gaccctcgaa
    15781 gacatccaag ccgatgccaa ttcctacctt gtccgcccgt gcgaaaccgc cgacgaagta
    15841 tgggacgaaa tcgaagcccg tttcgaagac attttcgccg ccgaacttgc cgactggtgc
    15901 gaagacgaac gcgagtggcc cgcactcgat gccgacattt tcaacgaatg gttcgacatc
    15961 cagctttcta ccgtcatcac cgacctcgaa cacgaaccgc ttgcccgcga agccttccaa
    16021 cccatcaacc tgaactgatg aagctgaccg tccgcaatta ccatctcgac ggctacggtc
    16081 atgtcaacaa tgcacgctac ctcgaatttc tcgaggaagc gcgctgggcg ttttttgaaa
    16141 aacgcggact gatgcacgag ttggcaggcc tcatactgat tgtcgcccgc atcgacatcc
    16201 gatacagccg tcccgccgtc gaaggcgacg tattgcagtt ttcatgccgc ctgaaaaccc
    16261 ccggcatgcg ccgcattgtg ctgacccaga cgattacact gccaaacggc aaaaccgccg
    16321 cagaagccga catcaccctg atgcccgtcc acgccgccac acaacgcacc gtcagcctgc
    16381 ccgccaccct tgcccgcgca ctggaagcct tgtccgaatg aaaaaaatac tcaccgccgc
    16441 cgccgtcgca ctgatcggca tcctccttgc caccgtcctc atccccgaca gtaaaaccgc
    16501 gcccgccttc tccctgcccg acctgcacgg aaaaaccgtt tccaacgccg acctgcaagg
    16561 caaagtcacc ctgattaatt tttggtttcc ctcctgtccg ggttgtgtga gcgaaatgcc
    16621 caaagtcatc aaaacggcaa acgactacaa aaataaagat ttccaagtcc tcgccgttgc
    16681 ccagcccatc gatccgatag aaagcgtccg ccaatacgtc aaagactacg gactgccgtt
    16741 taccgtcatt tatgatgcgg acaaagccgt cggacaggca ttcggcacac aggtttatcc
    16801 gacttccgtc cttatcggca aaaaaggcga aattctcaaa acctacgtcg gagaacccga
    16861 tttcggcaaa ctctaccaag aaatcgatac cgcgctggcg caatagcgat gccgtctgaa
    16921 gcgcaaaaaa cagaaacgat gttcctgttt tttcagatca tccgccccga cacgttcagg
    16981 cggcattcaa ccttccggca gattcttttt caccaccgca ggattgcctg ccgccaaaga
    17041 gtagggcgga atgtcttttg taatcaccgc gcctgcgccc acgaccgagc cgcgtccgac
    17101 ggttacgccc gccatcacaa tcaccctgcg ccccggccag acatcgtcct ccaacgtaat
    17161 cggacggatt tccgtgtagc cctcaaagcg tttttttcac ggtcaaactt gtggttggtc
    17221 gaatagagca ggcattccgg ccccatcatc acatttttgc cgaccaccag cccacggcag
    17281 atttcacagt ttgccccgat gcccgagccg tcgcccaaaa ccgtatccgg aaacacatac
    17341 gccccgcgtc ccgagccgtc gcccaaaacc gtatccggaa acacatacgc cccgcgtccg
    17401 atatgcggcg aaatccgccg cgccagaaaa ccgagcaccc gtctgccgat gatgccgatg
    17461 ccgcgcatat gcgacggcgg cagcaccgaa ccggcaaaac gcagcagcag gaaaaagaat
    17521 tttgattcca tcaaaccttc ctcaaaagaa ctttttacat tttatcgaat atcctcttga
    17581 cgaaacaaca gaaaatagcg agaatgccga gcttgtctga ggcataggta catcccctat
    17641 gcccgctttt ttgaaaggaa atcaaatgaa acaaggtatt cacccgaact accgcgaagt
    17701 taacgttacc tgctcttgcg gcaacaaatt cgtaaccaaa tccgcaatgg aaaaagaaaa
    17761 ctttaacatc gaggtttgct ccctgtgcca cccgttctat accggcaccc aaaaaatcgt
    17821 cgataccacc ggccgcgtgg acaaattcaa caacaaattc ggcaacctgt tcaaacgctg
    17881 attgccgctt tgcaagaatt aagccctgcc atcatttcga tggcagggct ttttaatatt
    17941 tggcacactg acttcttatc tatatagtgg attaacaaaa atcaggacaa ggcgacgaag
    18001 ccgcaggcag tacaaatagt acggcaaggc gaggcaacgc cgtaccggtt tttgttaatc
    18061 cactatattt tgacggggtt gaagttgaca gctacaaagt ttaatgtttg aatacgttaa
    18121 aaaatatatt tgaatgggat gttttatgat tcaaaatgtt gttacttcaa taatcctgta
    18181 ttctgggaca gccgtagact tacttattat cctaatgtta ttttttgcca aaaaaaaagc
    18241 agaaaagaca tcattaacat ctatttagga caatttctag gctctgttag cctgatattg
    18301 ctaagtttgc tttttgcatt tgtcttagat tatattccta gtaaagagat tttaggtttg
    18361 ctcggcttga ttccgatttt cctaggcctc aaagttttgc tgttaggaga ttccgatgga
    18421 gagtctattg ccaaagaggg tttgcgcaaa gataataaaa acctgatttt tctagtcgct
    18481 atgattactt ttgcaagttg tgtcgctgac aatattggtg tctttgtccc atattttact
    18541 accttaaatt tagcgaattt gatagtggct ttacttacct ttctagttat gatttatctc
    18601 ttggtttttt ctgcccaaaa attggcacaa gtcccttctg tcggagaaac tttggaaaaa
    18661 tatagcagat ggtttgttgc cgttgtttat ttaggattgg ggatatatat cctgattgaa
    18721 aacaacagtt ttgatatgct atggactgtg tcgggccagg aaaaaatatt atgaaaaaat
    18781 agtatctgca aagactgccc cgtgcagtct tttttgttgc cggtcttttt gtgtctgatg
    18841 ccgtctgaag cagtctctgc acgacctttg tgcgaatatt tgctacactt ggcaatccgt
    18901 ccatttcttc tcacgcttat gctgacctat accccgcccg atgcccgccc gcccgccaaa
    18961 acccacgaaa aaccgtggct gctgctgttg atggcgtttg cctggctgtg gcccggcgtg
    19021 ttttcccacg atttgtggaa tcctgccgaa cctgccgtct ataccgccgt cgaagcactg
    19081 gcaggcagcc ccaccccctt ggttgcccat ctgttcggtc aaaccgattt cggcataccg
    19141 cccgtgtatc tttgggttgc cgccgcattc aaacatttgc tgtcgccgtg ggcagccgac
    19201 ccgtatgatg ccgcacgctt tgcaggcgta ttttttgccg ttatcggact gacttcttgc
    19261 ggctttgccg gtttcaactt tttgggcaga caccacgggc gcagcgttgt tttaatccat
    19321 atcggctgta tcgggctgat tccggttgcc catttcctca atcccgccgc cgccgccttt
    19381 gccgccgccg gactggtgct gcacggctac tcgctggcac gccggcgcgt gattgccgcc
    19441 tctttcctgc tcggtacggg ttggacgttg atgtcgctgg cggcagctta tccggcggcg
    19501 tttgcgctga tgctgcccct gcccgtgctg atgtttttcc gtccgtggca aagcaggcgt
    19561 ttgatgttga cggcagtcgc ctcgcttgcc tttgccctgc cgcttatgac tgtttacccg
    19621 ctgctcttgg caaaaacgca gcccgcgctg tttgcgcaat ggctcaacta tcacgttttc
    19681 ggtacgttcg gcggcgtgcg gcacattcag acggcattca gtttgtttta ctatctgaaa
    19741 aatctgcttt ggttcgcact gcccgcgctg ccgctggcgg tttggacggt ttgccgcaca
    19801 cgcctgtttt cgaccgactg ggggattttg ggcattgtct ggatgcttgc cgttttggtg
    19861 ctgctcgcct ttaatccgca gcgttttcaa gacaacctcg tctggctgct gccgccgctt
    19921 gccctgttcg gcgcggcgca actggacagc ctgaggcgcg gcgcggcggc ttttgtcaac
    19981 tggttcggca ttatggcgtt cgggctgttt gccgtgttcc tgtggacggg ctttttcgcc
    20041 atgaattacg gctggcccgc caagcttgcc gaacgcgccg cctacttcag cccgtattac
    20101 gttcccgaca tcgatcccat tccgatggcg gttgccgtac tgttcacacc cttgtggctg
    20161 tgggcgatta cccggaaaaa catacgcggc aggcaggcgg ttaccaactg ggcggcaggc
    20221 gttaccctga cctgggcttt gctgatgacg ctgttcctgc cgtggctgga cgcggcgaaa
    20281 agccacgcgc ccgtcgtccg gagtatggag gcatcgtttt ccccggaatt aaaacgggag
    20341 ctttcagacg gcatcgagtg tatcggcata ggcggcggcg acctgcacac gcggattgtt
    20401 tggacgcagt acggcacatt gccgcaccgc gtcggcgatg tccgttgccg ctaccgtatc
    20461 gtccgcctgc cccaaaacgc ggatgcgccg caaggctggc agacggtctg gcagggtgcg
    20521 cgcccgcgca acaaagacag taagtttgca ctgatacgga aaatcgggga aaatatatta
    20581 aaaacaacag attgagccga atttctggat taagtgccgg aaatcgcgta taattgcgcg
    20641 attaaaccct tatatagtgg attaaattta aatcaggaca aagcgacgaa gccgcagaca
    20701 gtacaaatag tacggcaagg cgaggcaacg ccgtaccggt ttaaatttaa tccactataa
    20761 atcagccgtt ttgcaggcat cacacaggag cgacaattat tatgatgacc ctctattccg
    20821 gcattacctg ccccttcagc caccgctgcc gcttcgtttt gtacgaaaaa ggtatggatt
    20881 ttgaaatcaa agatatcgat atttacaaca aacccgaaga cctcgccgtc atgaacccgt
    20941 acaaccaagt ccccgtgctg gtcgagcgcg atttggtgct gcacgagtcc aacatcatca
    21001 acgaatacat cgacgaacgc ttcccccatc cgcagcttat gcccggcgat cccgttatgc
    21061 gcggccgggg gcggctggtg ctgtaccgta tggaaaaaga attgttcaac cacgtccaag
    21121 ttttggaaaa ccccgccgcc gccaacaagg aacaggcaaa agcgcgcgaa gccatcggca
    21181 acggcctgac gatgctttcc ccttcgttca gcaaaagcaa atacatcctc ggcgaagatt
    21241 tttctatgat tgatgttgcc ctggccccgc tgttgtggcg gctcgaccat tacgatgtca
    21301 aactgggcaa aagtgccgcg ccgctgctca aatacgccga gcgtatcttc cagcgcgaag
    21361 cctttatcga agcactgaca cccgccgaaa aagccatgcg caaataagtc cgaaatgctt
    21421 gcaaaacccg ccgttttgca ggcattttca cattcaggca caccacacgg aacccatcat
    21481 gcccacctca accaaaccct acatcctccg cgcactttgc gaatggtgca gcgacaacag
    21541 cctcacgccg cacatccttg tctgggtaaa cgagcatacg cgcgtcccca tgcagtacgt
    21601 ccgcgacaac ggaattatgc tcaacatcgg cgcgaccgcc acgcaaaacc ttcgaatcga
    21661 caacgattgg atcagctttt ccgcccgttt cggcggacaa gcgcacgaca tatggatacc
    21721 tgtcggacac gtcctcagcc ttttcgcacg ggagaccgga gaaggtatgg ggtttgaatt
    21781 ggaggagtac cgccccgaca cgccgtctga aaacacctct gccgaaaccg cgccccggcc
    21841 cgccaaaaaa ggtttgaaat tggtcaaata aatctatgcc gtctgaacgg aatcgtgttt
    21901 cagacggcat tttgtccgat ggggcgcaaa cggaatccgt ttgtcggcaa aacctgtttc
    21961 ggcgtatcga aaccgtgttg cccctgccga ttcgatattg ggacattgaa aatgccgtct
    22021 gaacctgcga tacgggcttc agacggcgtt ttgtccgata ttcgggcaat caggcggtca
    22081 gtacggtttt caagattttg ttgacttcgc ccatatcggc tttgccggcg aggcgggttt
    22141 tcaatacgac catcactttg cccatatccg ccatacctgc cgcgccggtt tcggcaacgg
    22201 ctgcttcgac ggcggtgcgg atttcgccgg cggagagcat ttgcggcagg tagcggtgca
    22261 gcacgtcgat ttcggcgttt tctttgtctg ccaaatcctg acggccggct tcagtgtaga
    22321 ttttcgcgcc gtctttgcgc tgtttgacca ttttggtcag gatggcggtg attttggcat
    22381 cgtcggcttc gatgcgttcg tctacttcaa actgtttgac ggcggcattg atgaggcgga
    22441 tggtgccgag ggaaacttga tctttggcgc gcatcgcggt tttcatatct tcggtaaggc
    22501 gggttttcag gctcatgatg tcctcgctgg gatgtcggat ggaaacggcg ggtttcgatg
    22561 ccgtctgaaa agcaaaacac accgcagagc aggtcttgcg gtgtgtcttc atatcacagg
    22621 gctgacctgt aatctgtact tgaacgttta gtacattttg ggcggcagct gttggctgcg
    22681 caggcgtttt tgcaggcgtt ttacggctgc cgcttttttg cgtttgcgtt cggtagtcgg
    22741 tttttcgtag gcttcgcggg cgcgcagctc ggtcagcagg ccggtttttt ctacggcgcg
    22801 tttgaaacgg cgcatagcga cttcaaaggg ttcgttctct tttacgcgga ttgcaggcat
    22861 tttatttcct ttaataaatt cggttgttcc atctgcccat cataatcggt ggaaagggta
    22921 gggcagacgg tgttgtaggt tttccgtatc gctgtgcctt tcggcggcgg gatacgcgcc
    22981 gtgacggaaa catcacctcc taacgggtcg gcttgtgccg tgtcaagctg cttgaaaaag
    23041 taggaaaaac aattttcgga ttgtcttata tttatggttc gccgtcaatg ccgttcggga
    23101 taaaaatgcc gtctgaaaga ccgggcgggt ttcagacggc atcggcacgt cagcgtgcgg
    23161 gaacggtgcc catacgctgt ttgagcggga tgtgcggcgc gccgaagagg gaggcgtagt
    23221 aggcggcatt ggtcatcact tttttgacat agtcgcgcgt ttcggaaaac gggatggttt
    23281 cggcatatac cgcgccttcg aggggtgtgt ccgcctgcca tcggcgcgcc ctgccggggc
    23341 cggcgttata gcctgcggtg gcgaggattt cgttgttttg caggcggcgt ttggtgtccg
    23401 ccatatacca cgtccccata cggatattgc cgtcggcggt gtagagctgg gcggcatcca
    23461 taccgatttt gccggcgatt tcgcgcgcgg tggcaggcat aacctgcatc agcccctgcg
    23521 cgcctacgcg ggattgcgcg cctataacga agcggctttc ctgacgaatc aggccgtaaa
    23581 cccaagccgg atcgacatta acattttgcg cgtggcggat taccgtgtct ttaaacggcg
    23641 aaatatagcg caaggtgtag ttgagtttgc ggtcggtgcg ttccgcgctg ttgaccgcca
    23701 tatcgtaaaa accgtggtcg aacgcggttt gcgcggcggc cagcagcttg tcttcgtcaa
    23761 agccgcgtgt ggcaaaacgc cattccgcct gagcctgacg gcgcattttc gcatcgccgg
    23821 cggttcggct gtgttggaac aacaccagtg cgcgcttaat cgcgccgtct tccgccatac
    23881 ggaggacgct gtttttgccg gcatcgggaa cattgttgcg cgtatcgatt ttgcgcccca
    23941 actcttcccc tgccagtacg gcataaaaat tcctgcccgt cgctgccgcc tgtttgtaaa
    24001 gtttttccgc ttcttgcgtg ttgcccgttg cggcgcggct gcgtgccagc cagtagagcc
    24061 aggtcgggct tttttgcagt ttttcgggca tatgcgagat cacggaggcc agctcgtccc
    24121 aacgtcgggc gcgcaaggtg gcgcgggcgt accactcgat ttggtcgtcg gtcagttggc
    24181 ggcggtcggc aaccttgccg taatagtcca aggcggcagg cacattgagg ctttgcgact
    24241 gataatgccc caatacgccc cacgcgaaac tgcgttgttc ggggcttaaa ccgctttcca
    24301 tttcggacag cagggcggcg gcattcggcg atttgcgtgc ttctttgccg atgacgttca
    24361 acagggcata ttcgcgcgaa ccttgtgtac cgccgtcaaa cgggctgccc aatgcggcgg
    24421 caaggttgcg cgcgtccgtc gtttggcggc cggccagcag tccgcgcacg cgcctccagg
    24481 catcgttgcc gtccaacaag ccggatgcgg ctgcctgttc caacagtttg gtgcagcccg
    24541 aaggcagttt gcccgtattt ttgaccagtt cggcggcacg cgtatagtcg ttgcggctcg
    24601 aatcggcgta gcattcgact tcttgggcgc gcccttcagg tttgagtttg gcatattcct
    24661 gtgcaaacag cgtccactgt ctgcgcgcgc ccaaagactt cagccactcg ttgcggacat
    24721 tttccgccat cgcgctgtcg ccggcgtttt ccaaataggc ggcggctgcc gcatcgttgt
    24781 tctgtttcac tgcatccagt gcggacgggt agccgccgta atctgccagc gtttttcctt
    24841 ccggttcggc agggcgggtg ggaacgcttg ccgaaagatc ggcagtttct atattgtctg
    24901 ccggggtctt gccggctggc agtgtgtttg tcgaagaaca cgcggcaagc accagggccg
    24961 ccagcagcgg cagggaatgc ttcatagagg gtaggtacat cggatttcct taagaatcgg
    25021 aaccctgaac ggtcagggtt ggaaaagaca aaatgccgtc tgaacaggcg tttgcatgaa
    25081 ttatatgccg aaactgcacc gcctttggaa tgtttccgac ataatttata gtggattaaa
    25141 tttaaaccag tacggcgttg cctcgccttg ccgtactatt tgtactgtct gcggcttcgt
    25201 cgccttgtcc tgatttttgt taatccacta tatatttttc aattatttgc cgttttggtg
    25261 cgaaccgctg cctttgcccg tttcagacgg cattgtccga aatggttgcc cgcttcctgc
    25321 cttattgaca aaaaaacgct ttcccgataa tatcctacga aaattaacct gccgatttga
    25381 cacagcttgc gggcataaca gctaaagcgt tccgacaatt tcagctttat cttccgcgcc
    25441 cgttgtgtcc gacatcgggc tttgttgtat gggaaagaca atgattattt tggacaaggt
    25501 ttccaagcat taccaaacgc gcgacaaaac ccgttttgcc gccgtcgagc cgaccagcct
    25561 cgaaattcaa gacggcgaaa tcttcgggct gatgggctat tccggcgcgg gcaaatccac
    25621 tttgttgcgc ctgatcaacc tgttggaacg ccccgacacg ggcaaagtca acgtctgcgg
    25681 acaagaactg accgcgctcg atgccgccgc attgcgtcag gcgcggcaga atatcggcat
    25741 ggtgtttcag cagttcaacc ttttaagcaa ccgcaccgtc gccggcaacg ttgcctttcc
    25801 actggaaatc gccggatggc cgtctgaaaa aatcaaagcg cgcgttgccg agtgcctcga
    25861 aatcgtcggc ttgaccgaac gcgccggcca ctaccccgcc cagctttcag gcgggcagaa
    25921 acaacgcgtc ggaatcgccc gcgcgctcgc gcccaagccg caagtcatcc tcgccgacga
    25981 acccacttcc gccctcgacc ccgccaccac gcgcagtgtc ttggaatgtt tggaagacat
    26041 caacaaacgc ttcaacgtta ccatcgtcat cgtaacccac gaaatgagcg tcatcagacg
    26101 attgtgcgac cgcgccgccc tgttggataa agggaaagtg gtggaaatcg tcgaagtacg
    26161 cggcaaccaa atccacgctc aatccgaaat cgggcgcgaa ctgattcggg aggactgata
    26221 tggcagactt aacattcgaa caagccgttt ccaccatcgt cggcatgaaa gacgaaatcg
    26281 tccgcgcctt gggcgaaact ttcgtgatgg tcggcttgtc caccacattc gccgtcatct
    26341 tcggcacgct cttgggcgtg ttgctcttcg taacttccag ccgccaactg cattacaaca
    26401 agccggtgaa cttcctgctc gacaacctcg tcaacctcat gcgcgccttc cccttcgtca
    26461 tcctgatgat tgcgatgata cccgccacac gcgccatcgt cggcagcacc atcggcccgg
    26521 ttgccgcctc gctggtgttg agcgtgtcgg gattgtttta ttttgcccga ctggtggaac
    26581 aaaacctgcg cgaagtccca aaaggtgtga ttgaagccgc cgccgcgatg ggtgcgccgc
    26641 cgattgccat cgtcctcaaa gtcctcttga acgaagcgcg cgcgggcatg gtttccagca
    26701 ttaccgtgct tgccatcggg cttttgtcat acagcgcggc ggcaggcatg ataggcggcg
    26761 gcggcttggg cgacctcgcc atccgctacg gctactaccg ctaccaaacc gaagtcatcg
    26821 tcttcatcgt cgccctcctc gtgctgctgg tcatcctgat tcaaagcacc ggcaacgcgt
    26881 tggcgcggaa actcgacaaa cgttaaaccc gaatgccgtc tgaacgccaa aaaccccgcc
    26941 gctatccgaa aaatgctata aaatccccct gttcgcggca aatgccgtct gaacgccgaa
    27001 tccggacggc aggactccct gcctgtcatt tttgtttgaa accgccacaa catcaggaga
    27061 aaatatgaaa accttcttca aaaccctttc cgccgccgca ctcgcgctca tcctcgcagc
    27121 ctgcggcggt caaaaagaca gcgcgcccgc agcctctgcc gccgcccctt ctgccgataa
    27181 cggcgcggcg aaaaaagaaa tcgtcttcgg cacgaccgtc ggcgacttcg gcgatatggt
    27241 caaagaacaa atccaagccg agctggagaa aaaaggctac accgtcaaat tggtcgaatt
    27301 taccgactat gtgcgcccga atctggcatt ggcggagggc gagttggaca tcaacgtctt
    27361 ccaacacaaa ccctatcttg acgatttcaa aaaagaacac aacctggaca tcaccgaagc
    27421 cttccaagtg ccgaccgcgc ctttgggact gtatccgggc aaactgaaat cgctggaaga
    27481 agtcaaggac ggcagcaccg tatccgcgcc caacgacccg tccaacttcg cacgcgcctt
    27541 ggtgatgctg aacgaactgg gttggatcaa actcaaagac ggcatcaatc cgctgaccgc
    27601 atccaaagcc gacatcgcgg aaaacctgaa aaacatcaaa atcgtcgagc ttgaagccgc
    27661 acaactgccg cgcagccgcg ccgacgtgga ttttgccgtc gtcaacggca actacgccat
    27721 aagcagcggc atgaagctga ccgaagccct gttccaagag ccgagctttg cctatgtcaa
    27781 ctggtctgcc gtcaaaaccg ccgacaaaga cagccaatgg cttaaagacg taaccgaggc
    27841 ctataactcc gacgcgttca aagcctacgc gcacaaacgc ttcgagggct acaaataccc
    27901 tgccgcatgg aatgaaggcg cagccaaata aggcagtcgt ataaaatgat gccgtctgaa
    27961 ccgcattccg tgttcagacg gcatttttgt cctttaatcc gccattccct gccattccgc
    28021 caaatccggc gtatcgattc cgaacagcga cagcgtgtgt gcgatactgt gcgccactat
    28081 gtcgtccgcc gtctgcggct tgcggtacat cgcaggaaca gggggaaaca ccacgccgcc
    28141 catttccgtt acccgcttca tattgtccaa atgggcaagg ttcagcggcg tttcgcgcac
    28201 catcagcacc agccgccgcc tttccttcaa aaccacatcc gccgcacgcg tcaagagatt
    28261 gtcgccgaag ccgtgcgcga cagaggcaag cgtccgcatc gaacagggtg cgaccagcat
    28321 cccgtccgtt ttaaacgtac cgctggcaat gcacgccccg atattgccga tcggatggac
    28381 gaaatcagcc aaggcatata cttcgtcttt cgtataatcc gtttccgaag cgcgcgccat
    28441 ctccgcgcct ttcgatacca caaggtgcgt ttcgacatct tgcgcgcgca aaagttccaa
    28501 agccttcacg ccgtattgga aaccgctcgc cccgctgatg ccgattatca aacgccgtac
    28561 catcatccgc ctttcccata aaaccgcctg caacggcaaa ccggctatta tagtgaaaaa
    28621 acagaaatcc gataaacacg gatacaaatt gtcggcaaca cccaatatcc gataaaatac
    28681 ccgatttaac atcctatctg aataggcacg ggagggcggt atggcaaaag taaaaggcgg
    28741 attggggcgc ggcttggatt cgctgctcgc caacggtgcg gacaacagca gcggcgaccg
    28801 gttgactgcg gttgcggtta aagatatccg gcccggccgc tatcaggcgc gcgtccaaat
    28861 cgatgacgaa gccttgcagg aactggcaga ttcgattaag gcgcaaggcg tgatacagcc
    28921 cgtcatcgtg cgcgaacacg gactgtcccg atacgaactg attgcaggcg aacgccgttg
    28981 gcgcgccgct cagattgccg gcctgtccga aatccccgcc gttatcaaaa ccatcagcga
    29041 cgaaaccgca ttggcaatgg gtttgatcga aaacctccag cgcgaaaacc tcaaccccat
    29101 cgaagaagca caaggcttga aacgccttgc cgacgagttc gggctgaccc acgaaaccat
    29161 cgcccaagcc gtcggcaaaa gccgaagcgc gatttccaac agcctgcgcc ttttaagcct
    29221 gcccgaatcc gtgcaggaaa tgctttacca acgccgcctc gaaatggggc acgcccgcgc
    29281 actgctgacc ctgcccgtcg tcgaacagct cgaattggcg caaaaggccg tcaaaaacgg
    29341 ctggtcggtg cgcgaagtcg aacgccgcag ccaggccgcc cttcaaaaca aacgtcccga
    29401 gccaaaaaaa actgccgccg ccgacatcgg ccgcctgaat gatttgctga ctgaaaaatt
    29461 gggtgtcaac gccgaaatca agaccgccaa ccataaaaaa ggcaaaatca tcctgcattt
    29521 cgacacgccc gaaaccttcg accatatctt gaagcagttg ggcatagatt accggcctta
    29581 attttgcggg atatgccgtt tgaaatatag agaatagctt tccagatttt aagtgggaaa
    29641 tataattcta ttgacatttt ttctgcttcg cgtaagaatc gttttcctgt tttcattttt
    29701 aattttcgag gaaattatga acacacgcat caactttacg caactgtggg taagcgcgtg
    29761 agccaatgct atgttaccag tgtaatcagc acaatcggcg ttaccacttc cgatgcaatt
    29821 tgttcgggag gcggaacgaa caaagccaaa agtcaatgca atgctttgct taaagcggca
    29881 ggccgctgct aatcctttat tcggaaaagg tcgtctgaaa atattttcag acgacctttt
    29941 atttattgag caaactcccc aaactgccga caatccgacc gataaactac tacaatttcg
    30001 cgttgatttt ttattatttc cacgtaaagc aaacaaatca cgtaagaaca ttaaaagtgt
    30061 aaagaaattg cggacaaact ccttaatatc ctgtaatcat atgtaatatg tgttagaata
    30121 gcggagttgg attttgggga gtcgctcgtc tgtatcggcg gcgagtttca caaagattaa
    30181 catattgctt gacgtaataa ggcttctaaa ttatattagc cgcgccccaa acctgaggcg
    30241 gaaacattcc ctttatgaag cagattatca tcctacaatc cgccgtattg tccatatgcg
    30301 ccgcagttgc ctttgccgta tggggttttg ccggattcct ttcggcggtc gggggcggtt
    30361 tgtcctacct gcttcccacg tttgttgcag ttttacttct aaaacttttc aggggaaacc
    30421 ccttcctgca aagcaggatg ttcgtcttcg gagagatttt aaaagtaatg ctgtcgctgt
    30481 tgtccatgct tgccgtattt gcaatatggc atcaatcgct ggtgttcgtc ccgtttttga
    30541 tggggctgct cggtgtcagc catctggttt ttttagtatt gttgagagtg aaagattatg
    30601 gcaggtgaaa ccattaccgc tgccgactac atcaagcacc acttgcagag cttgaccagt
    30661 ttgtcggatg ttactcaggg tcagggactg aaaaacattg ctgatttttc gtttattaac
    30721 cttgatgccg ttttttttgc cgtcctgttg ggcgtaatcg gcagcttcct gttgtggcgc
    30781 ggtgcaaaaa aagcaacggc aggcgttccc ggacgtttcc aggccgccgt ggaaatcttg
    30841 ttcgagtttg tggacgatat gtgtaagagc atcattcaca gcgaaaagtc tagaaaagcc
    30901 gtcgcgccgt tgggtctgac gctgtttgtt tggattttcc tgatgaacgc gatggatatg
    30961 ctgccggtcg atttgctgcc gatggtatgg cagggtatta ccggcaacca tcacgccctg
    31021 ctgcgcatcg taccgactgc cgatttgaac accgctttgg cactcgctgt cggcgtgttg
    31081 ctgatttgta tctattacaa catcaaaatc aaaggattgg gcggctggtt tcacgagttg
    31141 ttcagtgtgc cgttcggtgc aaaactcgca cctgcgaact ttctgttgaa cttggtcgag
    31201 tttctttcta aaaccgtatc ccacggtatg cggttgttcg gcaatatgta tgcgggcgag
    31261 ctggtattcc tgctgatagc cttgcttggc ggtgcttggg cggcttccgg cagcgtcgaa
    31321 gtcatggatc cgattctgtt tgtattccac attattgccg gtttggcatg ggcgattttc
    31381 catattttgg tgattaccct gcaggcattt attttcatgg cgttggcgtt cgtctatatc
    31441 gggcaggcgc acgatgccca ctgattttcc caagtagttt gtttttgtag tttaaccttt
    31501 gtttctttaa ggagtttaaa atgggtttga ttgctatcgc atgtggtttg atcgttgcat
    31561 tgggtgcatt gggtgcatct atcggtatcg caatggtcgg ttctaaatat ttggagtctt
    31621 ctgctcgcca acctgaactg atcggtccgc tgcaaaccaa actgttcctg attgccggtc
    31681 tgattgatgc cgcattcttg atcggtgtcg ccattgcact actgttcgcc ttcgttaacc
    31741 cgtttgcagg tgcataatca ggacggattc gtccgttcgt acaggtgcag cctgtttgat
    31801 taaccccaat acgaaggtta agtaacgtga atatcaatgc aacattattc gctcaaatca
    31861 tcgtcttttt cggtttggta tggtttacca tgaaatttgt gtggccgccg attgcaaaag
    31921 ctttggatga gcgtgccgca aaaatcgccg agggcttggc tgccgccgag cgtggtaaaa
    31981 gcgatttcga gcaggctgaa aaaaaggttg cagaactttt ggcagaaggg cgtaatcagg
    32041 tttccgaaat ggttgccaac gccgaaaaac gtgccgccaa aattgtcgaa gaagccaaag
    32101 aacaggcttc ttccgaggcg gcgcgcattg cagctcaggc aaaggctgat gtggagcagg
    32161 aattgttccg cgcacgcgaa tccctgcgcg atcaggttgc cgtgttggct gtcaaaggtg
    32221 ccgaatctat tttgcgcagc gaagtcgatg cttccaaaca cgcaaaactg ctcgataccc
    32281 tgaaacagga gttgtaatct tatggcagag tttgcaacga tcgccagacc ttatgcaaag
    32341 gcattgttcg gtctggctca ggaaaaaaac caaattgagt cttggttggg cggactggaa
    32401 aaacttgcgg cggttgttca ggaagggaag gtggcttcat tgattgaccg tcctgaaacg
    32461 aatgcttcag aaaaagcaga tatcctcatc gatttggtcg gtttgaaaga caaggagtta
    32521 aaaaactttg ttatcgtctt ggccgggcag aaacgtttgt cgatattgcc ggaagtgtat
    32581 gctcaatatc aagacttgac cttatcattc aaccatatca aatctgccgt catttacagt
    32641 gcctatccgt tgaccgacaa acaggtcggt gagttggcgc aaatgctgaa taagcgtttc
    32701 gacagcgagc tgaaaatctc tgtcgaaatc gaaccggagc tgattggcgg cataaaagtt
    32761 gaagtgggtg atcaggtttt ggatttgtct gtacaaggca aactgagtgc tttgtacacg
    32821 actatgacga attaggagag ttttcatgca gcttaatcct gctgaaatta gcgatctgat
    32881 taaagccaag atcgaaaatc tgtctgtaaa tgccgaagtg agtacccgtg gtacggtgat
    32941 ttcggtaact gacggtatcg ttcgcatcca tggtttgtca gatgcaatgc aaggtgagat
    33001 gctcgaattc ccgggtaaca ctttaggctt ggcgatgaac ctggagcgcg actccgtcgg
    33061 tgccgtagtg ttgggcgagt acgaacatat taaagaaggc gacacggtta cctgtaccgg
    33121 ccgtattttg gaagtgccgg tcggacgcga attggtcgga cgcgtcgtcg atgcattggg
    33181 tcggcctatc gacggcaaag gcccgattaa tacaactttg accgcccctg tcgaaaaaat
    33241 cgcaccgggc gtgattgcac gcaaatcggt tgatcagccg atgcaaaccg gtctgaaggc
    33301 gattgactct atgattcctg tcggtcgcgg tcagcgtgag ttgattattg gagaccgtca
    33361 gacaggtaaa acggccgtgg cattggatgc catcgtcaac caaaaaggta cgggtgttat
    33421 ctgtatctat gtcgctatcg gtcaaaaagc atcttctatt gccaacgtgg tccgcaaatt
    33481 ggaagagcat ggcgcgatgg aacacacgat tgtggttgct gcaactgcat ctgaagcggc
    33541 ggcattgcaa tatatcgcac cttattcagg ttgtacgatg ggtgaattct tccgcgatcg
    33601 tggcgaagat gccttgattg tttatgacga tttgtccaaa caggctgtgg cttaccgtca
    33661 aatttccctg cttttgcgcc gtccgcccgg ccgcgaagcc tatcccggcg atgtgttcta
    33721 cctgcactcc cgtctgttgg aacgtgcggc acgtgtcaat gaacacgaag tggagaaatt
    33781 gaccaacggc gaagtaaaag gcaaaaccgg ttctctgacc gcgttgccga ttatcgaaac
    33841 ccaagcgggc gacgtatctg ctttcgttcc gactaacgtc atttcgatta ccgacggtca
    33901 gattttcttg gaaaccgacc tcttcaacgc cggtatccgt cctgcaatca atgccggtat
    33961 ttccgtatcc cgcgtaggcg gtgctgcaca aaccaaagtg attaaaaagc tgggtggcgg
    34021 tatccgtttg gcgttggcac aatatcgtga attggcggcg ttctcgcaat ttgcatccga
    34081 tttggatgaa gctacgcgca aacagttgga gcatggcgaa gtcgtaaccg aactgatgaa
    34141 acagaaacag ttcagtacgt tgaatacggc tgaaatggct ttgacccttt gggcaatcaa
    34201 caacggttcg tattctgatg ttccggttgc caaagctcta gcttttgaat ctgaattttt
    34261 gagctttgtc cgtacccaac atccggaagt tttggaagcc gtcaatgctt caggtgcaat
    34321 gtccgacgag agcgagaaaa cgcttgaagc agccatgaaa tccttcaaat cttcttacgc
    34381 ctatcaggca taaggcttga agtgaaagga gtctgaaatg gcagtaggaa aagagattct
    34441 caccaaaatc cgcagtgttc agaataccca aaagatcact aaagcgatgc aaatggtgtc
    34501 aacctctaaa atgcggaaga ctcaggaacg gatgcgtttg gcgcgtccgt atgccgaaaa
    34561 agtgcgtatg gtgatgagcc atcttgcgca aaccaatacc gatcatggta ttccgttact
    34621 ggaatctcat cgggaaatca gacgtgtcgg ttttattttg attacgtctg ataagggttt
    34681 gtgtggcggt ttgaacgcca acgtgctgaa aaagtttttg gcacaagttc aagagtatcg
    34741 gaatcaaggt attgaagagg aaatcgtatg ccttggcagt aaaggtctga tggcgtgtca
    34801 gagcattggt ctgaatgtgg ttgccagtgc cgtaaatttg ggcgataccc caaaaatgga
    34861 aatgctgctc ggacctttga cagaactttt ccaacggtat gagaaacatg aaattgacag
    34921 aatccatctg gtgtattcgg gttttgtcaa taccatgcgt caagaaccga ggatggaagt
    34981 attgctgcct atcggtgaga acgtgattgg cgattcagct cccaaatcac cgttcagctg
    35041 ggaataccgc tacgaaccga ctgcacttgc agtgttggaa tatctggttc gccgctattt
    35101 agagtctgtg gtttatcagg cgttgagcga caatatggca tccgaacagg cagcccgcat
    35161 ggttgccatg aaagctgcaa cagacaatgc aggcaatgcc atcaaagagt tgcgtctggt
    35221 atataacaaa tcgcgtcaag ctgcgattac cacggaattg tcagaaattg tagcaggtgc
    35281 ggcggccgtc tgatgccgtc tgaatcctgt acggaaatta ggatacgata atgagccaag
    35341 gcaaaatcgt acaaattatc ggtgcggttg ttgacgtgga atttccacgc gacatgattc
    35401 cgcgcgttta cgacgctttg aaattagacg aaaacggtct gactttggaa gtccaacagc
    35461 ttttgggtga tggcgtagtc cgtaccatcg ctatgggcag ctcggacggt ttgaaacgcg
    35521 gcatgactgt gagcgatact ggttcgccca ttactgtgcc ggtaggtaaa ggtacgttgg
    35581 gacgcattgt cgatgtattg ggaacgcctg ttgacgaggc aggtccaatt gataccgaca
    35641 agagtcgtgc catccaccaa gccgctccta agtttgacga actgtcttcc acaaccgaat
    35701 tgctcgaaac gggcattaaa gtgattgact tgctgtgtcc gtttgccaaa ggcggtaaag
    35761 taggtctgtt cggcggtgcc ggtgtgggta aaaccgtgaa catgatggaa ttgatcaaca
    35821 acatcgccaa agcgcacagc ggcttgtccg tgttctcagg cgtgggtgag cgtacccgcg
    35881 aaggtaacga cttctaccac gagatgaaag attccaacgt attggataaa gtagccatgg
    35941 tgtatggcca aatgaacgaa cctccaggca accgtctgcg cgttgctttg accggtttga
    36001 ctatggctga atacttccgt gacgaaaaag acgaaaacgg taaaggtcgt gacgtattgt
    36061 tcttcgttga caacatctac cgttacactc tggccggtac cgaagtatcc gcactgttgg
    36121 gccgtatgcc ttctgcagtg ggttaccaac cgacattggc tgaagaaatg ggtcgtttgc
    36181 aagagcgtat tacctctacc caaaccggtt ccattacttc catccaagcc gtatatgtac
    36241 ctgcggatga cttgactgac ccgtctccgg cgacaacttt cgcccacttg gacgcgaccg
    36301 tcgtattgag ccgtgatatt gcctctttgg gtatttaccc ggcagttgac ccgcttgact
    36361 ctacttcgcg ccaattggat ccgatggtat tgggtcaaga gcactacgac gtagcgcgcg
    36421 gtgtacagtc tactctgcaa aaatacaaag aattgcgcga catcatcgcc attctgggta
    36481 tggacgaatt gtctgacgaa gacaaactgg ctgtaatgcg tgcccgtaaa atccaacgct
    36541 tcctgtctca accgttccac gttgccgaag tgtttacagg ttctccaggc aaatatgtcg
    36601 ccctgcgcga taccattgcc ggcttcaaag ccatcttgaa cggcgaatac gatcatctgc
    36661 ccgaacaggc attctatatg gtcggcagca tcgaagaagc ggttgagaaa gcgaaaacct
    36721 taaactgagg aggtcggcat gagcatcatg caagttgagg tggtaagtgg cgagcagaaa
    36781 atctattcag gcgaggcaac atttatcgtt gttccgactg tacagggcga actcggtatt
    36841 tatccgcgac acgagccgat tatgagtttg gtgcgtcccg gtgcgttgcg tttgaccgtt
    36901 ccgggcgagg ataaagaggt tttggttgct gtttccggcg gtattttgga agtacagcct
    36961 gataaagtaa ctgtcttggc ggatgttgcc gtccgcagtg cggaaatgga tcgggcacgt
    37021 gcggaagagg cgaaaaaagc cgcagaagcg ggcatttccc aagctaaaga cgataaggct
    37081 ttggcggaag cacataaagc attggctgcc gcaattgcac agctcaaaac tttggactat
    37141 atccgttcgc acaagaaata aacttgtttg gtttgaaaaa gcacgaccgt ttggccgtgc
    37201 tttttatttt ccggatttaa attaaaaaat tatccatccc ctggtttcaa atcaggctgt
    37261 cttcgagata aatctattca agcggctatg gaaacagtaa aataaaacct ttattttatc
    37321 gaacaataag ccatgcttac cttccaacaa atcatcttca aactgcaaac cttctgggca
    37381 gacaaaggct gcaccgtcat ccaacccttc gacatggaag tcggtgccgg cacatcccat
    37441 cccgccacct gcctgcgcgc gctcggcccc gagccttggt ttgccgccta cgtccaaccc
    37501 agccgccgcc ccaaagacgg ccgctacggc gacaacccca accgcctgca acactattac
    37561 caattccaag tcgccctcaa acccgccccc gccaatatcc aagacctcta tctcgactcc
    37621 ctgcgcgaat tgggcatcga tcccaaagtc cacgacatcc gctttgtcga agacgactgg
    37681 gaaaacccca ccctcggtgc gtggggtttg ggctgggaag tctggctcaa cggcatggaa
    37741 gtaacccagt ttacctattt ccaacaagtc ggcggtatcg attgcacgcc cgtactcggc
    37801 gaaattacct acggcatcga acgcttggcg atgtacctgc aaggcgtgga aaacgtctat
    37861 gacctcgttt gggcaaaaac gccggacggc aataccgtaa gctacggcga cgtgtaccat
    37921 caaaacgaag tcgagcaatc tacctacaac ttcgaataca gcgatgccga ctggctgctg
    37981 cgccagttca acgactacga agcgcaagcc aaacgcctgt tcgccgaaga aaacgccgac
    38041 cttgccttac ctgcctacga gctggtcctc aaagcggggc atacgttcaa ccttttagac
    38101 gcacgcggcg cgatttccgt aaccgagcgg gcaacttata ttggacgtat tcgtgcattg
    38161 agccgcgccg tggcgcaaaa atatatcgaa agccgtgaga aactgggctt cccgttgatt
    38221 aaaaaataac gatacgtcgt ctgaaacagg ttttcaggcg acctttattg cgtatccatt
    38281 aatacaggcc gtacggcata tgcaggcttt ataagcatgg cctacggaca aacagaaagt
    38341 ctcacatgac aacccaaacc cttttaatcg aactccttac cgaagaactc ccgccaaaag
    38401 ccctgaataa tctgggcaac cattttgccg cttccgttgc cgaaggcttg gaaaaagcgc
    38461 aactggttga cggcgcggcc gaatttacgg cttatgcctc gccgcgccgt ttggcggttc
    38521 aagtcaaaaa cgtgaaggcc gttcaagccg atcagaaaat cgtgaaaaaa ggccctgccg
    38581 tggcgaatgc cgtaaaagac ggtgcgccga ccaaggcttt ggaaggtttt gcgcgcggcg
    38641 caggcgcgaa aatcgaagac ctgaccatcg tccacgacgg caggcaggac gtgtacgcct
    38701 atgaatacgt ccaaaccggc aaaccgttgg gcggactttt ggaagacatt atcaatcaag
    38761 ctgttaagaa gctgccgatt ccgaaagtaa tgcgttgggg cagcagcacg tttaccttcg
    38821 tgcgccctgt tcacgggctg attgtgctgc acggcggcga tgtcgtgaac gtcagcgttt
    38881 tgggcctgca aagcggcaat caaaccttgg gacaccgctt tctttccgac ggcgaaatca
    38941 tcattgaaaa cgccgacagc tacgccgcac aaatgcgcgg gcaaggcaaa gtcgtcgctt
    39001 cgtttgccgg gcgcaaagcc gcgattcaga cggcattgga agggcaggca cgccgtctga
    39061 acgcgaccgt tgccgccgat gaagccctgt tggacgaagt aaccgcgctg gtcgaatggc
    39121 ctgttgtttt ggaagccggt tttgaggaac acttcctcgc catgcctcaa gaatgcttga
    39181 ttttgacgat gcagcaaaac caaaaatact tcccgctgct cgaccaaaac ggcaagctga
    39241 tgaaccgctt cctgctggtt tccaacctgc aaaccgaaga cccgtcgcac atcatccgag
    39301 gcaacgaacg cgtattgcgc gcgcgcctgt ctgatgccga gttcttctac aaacaagacc
    39361 aaaaagcgac cttggaaagc cgcctgccca agctggcgaa cgtggtgtac cacaacaaaa
    39421 tcggttcgca ggccgaacgc atcgagcgtc tgcaaagcat cgccgcccac atcgccaaag
    39481 cattgggcgc ggatgccgcg gcagccgagc gcgccgcgcg tcttgccaaa gccgacttgg
    39541 taactgaaat ggtcggcgag ttccccgaac tgcaaggcac gatgggcaaa tactacgccc
    39601 gcttggacgg cgaaaccgaa gaaatcgccg aagctattga gcaacactac caaccgcgtt
    39661 ttgccggcga caagctgccc gaaagcaaaa ttgccgccgc cgtggcactt gccgacaaac
    39721 tggaaaccct ggtcggcatt tggggcatcg gtttgattcc taccggcgac aaagacccct
    39781 acgccctgcg ccgcgccgcc ttgggtattt tgcggatgct gatgcagtac ggtttggacg
    39841 tgaacgaact gattcagacg gcattcgaca gcttcccgca aggtttgctc aacgaaaaaa
    39901 cgccgtctga aaccgccgac tttatgcagg cgcgccttgc cgtgttgctg caaaacgatt
    39961 atccgcaaga catcgttgcc gccgtactcg ccaaacagcc gcgccgtttg gacgatttga
    40021 ccgccaaact gcaggccgtc gccgtattca aacaactgcc cgaagccgcc gcgctcgccg
    40081 ccgccaacaa acgcgtgcaa aacctgctga aaaaagccga tgccgagttg ggcgcggtta
    40141 acgaaagcct gctgcaacag gacgaagaaa aagccctgta cgctgccgcg caaggtttgc
    40201 agccgaaaat cgccgccgcc gtcgccgaag gcaatttcca aactgctttg tccgaactgg
    40261 cttccgtcaa gccgcaggtt gatgccttct tcgacggcgt gatggtgatg gcggaagatg
    40321 ccgccgtaaa acaaaaccgc ctgaacctgc tgaaccgctt ggcagggcag atgaacgcgg
    40381 tggccgacat cgcgcttttg ggcgagtaac cgttgtacag tccaaatgcc gtctgaagcc
    40441 ttcaggcggc atcaaattat cgggagagta aattgcagcc tttagtcagc gtattgattt
    40501 gcgcctacaa cgtagaaaaa tattttgccc aatcattagc cgccgtcgtg aatcagactt
    40561 ggcgcaactt ggatattttg attgtcgatg acggctcgac agacggcaca cttgccattg
    40621 ccaaggattt tcaaaagcgg gacagccgta tcaaaatcct tgcacaagct caaaattccg
    40681 gcctgatt
//
LOCUS       DAXFZM010000009        39801 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.009, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000009 DAXFZM010000000
VERSION     DAXFZM010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 39801)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 39801)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..39801
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.009"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..243
                     /locus_tag="ACFJAG_000367"
     CDS             <1..243
                     /locus_tag="ACFJAG_000367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979757.1"
                     /translation="RGYGAAVSEVSERLKAAAVEHAEHARKSSAAYQAQKAAREEKER
                     VRYVQTLKIIEKPVYRNACFDADGVRELNAAVDDGG"
     gene            734..1114
                     /locus_tag="ACFJAG_000368"
     CDS             734..1114
                     /locus_tag="ACFJAG_000368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HFC3979758.1"
                     /translation="MPLKFQPRERSVIMCDFRGYEEPEMVKKRPVVVIARNRHNGKLV
                     TVVPLSSTEPVPLADCHHKMSENPLPDKPHIQCRAKCDMTATVGLARLDRYKPKGRDR
                     CIPIISEEDFQAVKTAVAKAFKLY"
     gene            complement(1315..2157)
                     /locus_tag="ACFJAG_000369"
     CDS             complement(1315..2157)
                     /locus_tag="ACFJAG_000369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bro-N domain-containing protein"
                     /protein_id="HFC3979759.1"
                     /translation="MQNTISVFSFKSQNVRTQILGAEPWFCLGDVAEILQIQNARQLP
                     LKDQGIQKSSVATKKGNQELLFINEPNLYRVIFRSRKAEAVKFQDWIFEEVIPQIRKT
                     GGYQITPKTTADDRTGLRRAVAALVGRKRIGYSSAYSMIHQRFNVEAVEGIPADKLPE
                     AVAYVHALTLHTGLAGEVPDREPLPAPQPALPIDGNSLADIAAMVYYGTRMIESGKDV
                     SAPLKQLGNRQAVTMLTVWHETRSILKRSAAALEVLRGYADKDASGRIAACLEGIYGK
                     AAAR"
     gene            complement(2656..2832)
                     /locus_tag="ACFJAG_000370"
     CDS             complement(2656..2832)
                     /locus_tag="ACFJAG_000370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979760.1"
                     /translation="MNPTKQSKKSYESKRVLKHVSFNTEKEANLLEFSNNLDFSKWVK
                     EKLKHELELEKLKK"
     gene            complement(3160..3651)
                     /gene="dtd"
                     /locus_tag="ACFJAG_000371"
     CDS             complement(3160..3651)
                     /gene="dtd"
                     /locus_tag="ACFJAG_000371"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-aminoacyl-tRNA deacylase"
                     /protein_id="HFC3979761.1"
                     /translation="MRAVIQKTVGAKVDVVSEAGTETCGKIDGGFVVLLGVTHSDTEK
                     DARYIADKIAHLRVFEDEAGKLNLSLKDVGGAVLLVSQFTLYADAASGRRPSFSQAAP
                     AEQAQRLYLRTAELLRGHGIHVETGRFRTHMQVSLCNDGPVTILLDSFMTRISPKMKV
                     VPD"
     gene            complement(3725..4483)
                     /locus_tag="ACFJAG_000372"
     CDS             complement(3725..4483)
                     /locus_tag="ACFJAG_000372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HFC3979762.1"
                     /translation="MKQKKTAAAVIAAMLAGFAAAKAPEIDPALVDTLVAQIMQQADR
                     HAEQSQRPDGQAIRNDAVRRLQTLEVLKNRALKEGLDKDKDVQNRFKIAEASFYAEEY
                     VRFLERSETVSESALRQFYERQIRMIKLQQVSFATEEEARQAQQLLLKGLSFEGLMKR
                     YPNDEQAFDGFIMAQQLPEPLASQFAGMNRGDVTRNPVKLGERYYLFKLGAVGKNPDA
                     QPFELVRNQLEQGLRQEKARLKIDALLEENGVKP"
     gene            complement(4553..5419)
                     /locus_tag="ACFJAG_000373"
     CDS             complement(4553..5419)
                     /locus_tag="ACFJAG_000373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HFC3979763.1"
                     /translation="MKAKILTSVALLACSGSLFAQTLATVNGQKIDSSVIDAQVAAFR
                     AENSRAEDTPQLRQSLLENEVVNTVVAQEVKRLKLDRSAEFKDALAKLRAEAKKSGDD
                     KKPSFKTVWQAVKYGLNGEAYALHIAKTQPVSEQEVKAVYDNISGFYKGTQEVQLGEI
                     LTDKEENAKKAVADLKAKKGFDAVLKQYSLNDRTKRTGAPDGYVPLKDLEQGVPPLYQ
                     AIKDLKKGEFTATPLKNGDFYGVYYVNDSREVKVPSFDEMKGQIAGNLQAERIDRAVG
                     ALLGKANIKPAK"
     gene            complement(5468..5746)
                     /locus_tag="ACFJAG_000374"
     CDS             complement(5468..5746)
                     /locus_tag="ACFJAG_000374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family protein"
                     /protein_id="HFC3979764.1"
                     /translation="MPAVDLIRERLQTLDPLVLEIGDESHLHKGHAGNTGGGHYAVLV
                     VSGRFEGLSRLNRQKTVKSLLKDLFSGGMIHALGIRAATPDEYFHTAD"
     gene            complement(5746..6036)
                     /locus_tag="ACFJAG_000375"
     CDS             complement(5746..6036)
                     /locus_tag="ACFJAG_000375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HFC3979765.1"
                     /translation="MEYFMLLATDGEDVHEARMAARPEHFKRLETLKSEGRLLTAGPN
                     LLPDNPERVSGSLIVAQFESLDAAQAWAEDDPYVHAGVYSEVLIKPFKAVFK"
     gene            complement(6039..6569)
                     /locus_tag="ACFJAG_000376"
     CDS             complement(6039..6569)
                     /locus_tag="ACFJAG_000376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septation protein A"
                     /protein_id="HFC3979766.1"
                     /translation="MKFVSDLLSVILFFATYTVTKNMIAAAAVALVAGVVQAAFLYWK
                     HKRLDTMQWVGLVLIVVFGGATIVLGDSRFIMWKPTVLFWCGALFLLGSHLAGKNGLK
                     ASIGREIQLPDAVWGKLTYMWVGFLIFMGIANWFVFTRFEAQWVNYKMFGSTALMLFF
                     FIIQGIYLSTYLKKED"
     gene            6877..9192
                     /gene="tspA"
                     /locus_tag="ACFJAG_000377"
     CDS             6877..9192
                     /gene="tspA"
                     /locus_tag="ACFJAG_000377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_164729270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FimV/HubP family polar landmark-like protein
                     TspA"
                     /protein_id="HFC3979767.1"
                     /translation="MKLIAASIAVAASFQAHARLGGLNIRSNLDEPFSGSITVTGEEA
                     KALLGGGSVTVSEKGLTAKVHKLDGKAVIAVSSAQAVRDPVLVFRIGAGAQVREYTAI
                     LDPVGYSPKTKSALSDGKTHRKTAPKAESQENQNAKALRKTDKKDSANAAVKPAHNGK
                     THTVRKGETLKQIAAAIRPKHLTLEQVADVLLKANPNVSAHGRLRAGSVLHIPNLNRI
                     KAAAPKKIKAEQPKPQTAKPKAETASMPSEPSKQATVEKPIEKPVEKPVEKPEAKVAA
                     PEAKAEKPAVRPEPKPAVSETPASATERQPGPVPAANTAASETAAESAPQEAAASAID
                     TPTDETGNTVSEPVAETASEVAAEPVAEPVEQVSAEEETESGLFDGLFGGSYTLLLAG
                     GGTALIALLLLLRLAQSKRARRTEESVPEEEPDLDDAADDGIKITFAEVETPATPEPA
                     PKNDVNDTLALGGESEEELSAKQTFDVETDTPSNRIDLDFDSLAAAQNGILSGALTQD
                     EETQKRADADWNAIESTDSVYEPETFNPYNPVEIVIDTPEPESVAQTAENKPETVDTD
                     FYNNLFSNNHIGTEETASAKPAAPSGLAGFLKASSPETILEKTVAEVQTPEELHDFLK
                     VYETGAVAETAPETPDFNAAADDLSALLQPAEAPAVEENAAEITLETPDSNTSEADAL
                     PDFLKDGEEETVDWSIYLSEENIPNNADTGFPSESVGSDAPSEAKYDLAEMYLEIGDR
                     DAAAETVQKLLEEAEGDVLKRAQALAQELGI"
     gene            complement(9365..9781)
                     /gene="gloA"
                     /locus_tag="ACFJAG_000378"
     CDS             complement(9365..9781)
                     /gene="gloA"
                     /locus_tag="ACFJAG_000378"
                     /EC_number="4.4.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004462 - lactoylglutathione lyase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0051596 - methylglyoxal catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lactoylglutathione lyase"
                     /protein_id="HFC3979768.1"
                     /translation="MRLLHTMLRVGNLEKSLDSYQNVLGMKLLRRKDYPEGRFTLAFV
                     GYGDETDSTVLELTHNWDTERYDLGNAYGHIAVEVDDAYEACERVKRQGGNVVREAGL
                     MKHGTTVIAFVEDPDGCKIEFVQKKSGDDSVAYANT"
     gene            complement(9806..10975)
                     /gene="lapB"
                     /locus_tag="ACFJAG_000379"
     CDS             complement(9806..10975)
                     /gene="lapB"
                     /locus_tag="ACFJAG_000379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0008653 - lipopolysaccharide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly protein LapB"
                     /protein_id="HFC3979769.1"
                     /translation="MDNELWIILLPIILLPVFFTMGWFAARVDMKTVLKQAKSIPSGF
                     YKSLDALVDRNSGRAARELAEVVDGRPQSYDLNLTLGKLYRQRGENDKAINIHRTMLD
                     SPDTVGEKRARVLFELAQNYQSAGLVDRAEQIFLGLQDGEMAREARQHLLNIYQQDRD
                     WEKAVETAQLLSHDEQTYQFEIAQFYCELAQAALFKSNFDAARFNVGKALEANKKCTR
                     ANMILGDIEHRQGNFPAAVEAYAAIEQQNHAYLSMVGEKLYEAYAAQGKPEEGLNRLT
                     GYMQTFPELDLINVVYEKSLLLKGEKEAAQTAVELVRRKPDLNGVYRLLGLKLSDLDP
                     AWKADADMMRSVIGRQLQRSVMYRCRNCHFKSQVFFWHCPACNKWQTFTPNKIEV"
     gene            complement(10986..11300)
                     /locus_tag="ACFJAG_000380"
     CDS             complement(10986..11300)
                     /locus_tag="ACFJAG_000380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly LapA
                     domain-containing protein"
                     /protein_id="HFC3979770.1"
                     /translation="MKLIYTVIKIIILLLFLLLAVINMDAVTFSYLPGQSVNLPLIVV
                     LFGAFVVGIVFGMFALFGRLLSLRGENSRLRAEVKKSARLSGQKLTAPPIQNAAESAK
                     QP"
     gene            11610..12608
                     /gene="ilvE"
                     /locus_tag="ACFJAG_000381"
     CDS             11610..12608
                     /gene="ilvE"
                     /locus_tag="ACFJAG_000381"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004084 - branched-chain-amino-acid
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0009081 - branched-chain amino acid
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain-amino-acid transaminase"
                     /protein_id="HFC3979771.1"
                     /translation="MSRPVPAVFGSVFHSQMPVLAYREGKWQPTEWQSSQDLTLAPGA
                     HALHYGSECFEGLKAFRQADGKIVLFRPTANIARMRQSADILHLPRPETQAYLDALVE
                     LVKRAADEIPDAPAALYLRPTLIGTDPVIGKAGSPSETALLYILASPVGDYFKVGSPV
                     KILVETEHIRCAPHMGRVKCGGNYASAMHWLLKAKAEYGANQVLFCPNGDVQETGASN
                     FILINGDEIITKPLTDEFLHGVTRDSVLTVAKDLGYTVSERNFTVDELKAAVENGAEA
                     ILTGTAAVISPVTSFVIGGKEIEVKNQERGYAIRKAITDIQYGLAEDKYGWLVEVC"
     gene            complement(12854..13639)
                     /gene="fabI"
                     /locus_tag="ACFJAG_000382"
     CDS             complement(12854..13639)
                     /gene="fabI"
                     /locus_tag="ACFJAG_000382"
                     /EC_number="1.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HFC3979772.1"
                     /translation="MGFLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKL
                     EERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSG
                     DFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNYNVM
                     GMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLR
                     RNVTIEEVGNTAAFLLSDLSSGITGEITYVDGGYSINALSTEG"
     gene            complement(13794..14615)
                     /gene="dapD"
                     /locus_tag="ACFJAG_000383"
     CDS             complement(13794..14615)
                     /gene="dapD"
                     /locus_tag="ACFJAG_000383"
                     /EC_number="2.3.1.117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008666 -
                     2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HFC3979773.1"
                     /translation="MSLQNIIETAFENRADITPTTVAPEVKEAVLETIRQLDSGKLRV
                     AERLGVGEWKVNEWAKKAVLLSFRIQDNEVLNDGVNKYFDKVPTKFADWSEDEFKNAG
                     FRAVPGAVARRGSFVAKNAVLMPSYVNIGAYVDEGAMVDTWATVGSCAQIGKNVHLSG
                     GVGIGGVLEPLQAAPTIIEDNCFIGARSEIVEGAIVEEGSVISMGVFIGQSTKIFDRT
                     TGEIYQGRVPAGSVVVSGSLPSKDGSHSLYCAVIVKRVDAQTRAKTSVNELLRGI"
     gene            complement(14825..16468)
                     /gene="pgi"
                     /locus_tag="ACFJAG_000384"
     CDS             complement(14825..16468)
                     /gene="pgi"
                     /locus_tag="ACFJAG_000384"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004347 - glucose-6-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HFC3979774.1"
                     /translation="MDAFTRAWYALERHYQDTCHILLRDRFAAEPDRFERMHERLDGM
                     LFDYSKNRFGEDTLQLLCRLAETADLEGKMRALRTGAKVNGSEGRAALHTALRLPDGA
                     DAVYADGRDVLPEIRRELNRALKFAHSLDDGLYQGITGKRIADFVHIGIGGSDLGPAM
                     CVQALEPFRRQISVHFVSNADPACLDEVLCRLNPETTMFCVASKSFKTPETLLNAEAV
                     KAWYRGAGFSESETARHFCAVSADTEAAQSFGIAAERVFAMYDWVGGRYSVWSPVGLP
                     VMVAVGGARFRELLAGAHAMDSHFFHTPPRRNIPVLMALIAVWYNNFQHADGQTAVPY
                     SHNLRLLPAWLNQLDMESLGKSRASDGSPAACKTGGIVFGGEGVNCQHAYFQLLHQGT
                     RLIPCDFIVPMTAQGAEDGRSRFTVANAFAQAEALMKGKTLDEARAELADLPEAERER
                     LAPHKEFPGNRPSNSILLDRLTPCNLGMLMAAYEHKTFVQGAIWNVNPFDQWGVEYGK
                     QLAKTIIGELEGGTSVHDASTEGLMAFYRECRLKGGGAA"
     gene            16978..18210
                     /gene="pilG"
                     /locus_tag="ACFJAG_000385"
     CDS             16978..18210
                     /gene="pilG"
                     /locus_tag="ACFJAG_000385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 4 pilus assembly protein PilG"
                     /protein_id="HFC3979775.1"
                     /translation="MAKNGGFSLFAKKEKRFIFEGRHSASDKLVNGEVSAFTEEEARK
                     KLAKRGIRPLQITRVKTSSKRKITQEDITVFTRQLSTMIKAGLPLMQAFEIVARGHGN
                     PSMTEMLMEIRGQVEQGSSLSRAFSNHPKYFDRFYCNLVAAGETGGVLESLLDKLAIY
                     KEKTQAIRKKVKTALTYPVSVIAVAIGLVFVMMIFVLPAFKEVYANMGAELPPLTQTV
                     MDMSDFFVSYGWMVLIALGFAIYGFLKLKARSIKIQRRMDAILLRMPIFGDIVRKGTI
                     ARWGRTTATLFAAGVPLVDVLDSTAGAAGNLIYEEATREIRTRVIQGLSMTSGMRATE
                     LFPNMMLQMSSIGEESGSLDDMLNKAAEFYEDEVDNAVGRLSAMMEPIIIVILGLVIG
                     TLLVAMYLPLFNLGNVVA"
     gene            18284..19144
                     /locus_tag="ACFJAG_000386"
     CDS             18284..19144
                     /locus_tag="ACFJAG_000386"
                     /EC_number="3.4.23.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="A24 family peptidase"
                     /protein_id="HFC3979776.1"
                     /translation="MSDLSVLSPFAVPLAAVLGLLVGSFLNVVIYRVPVMMERGWTVF
                     AKEHLNLPLTDDESRTFNLMKPDSCCPKCRVPIRAWQNIPIVSYLLLRGKCASCQTKI
                     SIRYPLIELLTGVLFGLVAWQYGWSWITLGGLILTAFLISLTFIDADTQYLPDSMTLP
                     LIWLGLIFNLDGGFVPLQSAVLGAVAGYSSLWLLCAVYKLLTGKTGMGNGDFKLIAAL
                     GAWLGISALPVLIFVSSLIGLVAAIVMRVAKGRHFAFGPALTVSGWIIFTANDSVWRA
                     VNWWLTHPVR"
     gene            19141..19773
                     /gene="coaE"
                     /locus_tag="ACFJAG_000387"
     CDS             19141..19773
                     /gene="coaE"
                     /locus_tag="ACFJAG_000387"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261706.1"
                     /note="Dephospho-CoA kinase (CoaE) performs the final step
                     in coenzyme A biosynthesis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004140 - dephospho-CoA kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HFC3979777.1"
                     /translation="MTAWVGLTGGIGSGKSAAAQYFADLGVPRIDADAAAHSLTASDG
                     IALPEIRRLFGDTVFDTQGLLRRDILRKEIFASPSRKALLESVMLPLIFSEIKKQQET
                     FTDAVYGIVEIPLLTEKRQFISLIRRVLTISAPLEKRIGRVMARSGLTRGEVADIISH
                     QASESERLLLADDVLLNDGSLKSLREKTMLLHAFYSGIFASKPTQGKHNG"
     gene            19766..19975
                     /locus_tag="ACFJAG_000388"
     CDS             19766..19975
                     /locus_tag="ACFJAG_000388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase inhibitor YacG"
                     /protein_id="HFC3979778.1"
                     /translation="MAESRQTRLQVKCPTCQTAVVWKPENAFRPFCSQRCKLIDLGGW
                     ADGKYTVSGQTESLPEISEPDGAYR"
     gene            complement(20061..21737)
                     /gene="pilB"
                     /locus_tag="ACFJAG_000389"
     CDS             complement(20061..21737)
                     /gene="pilB"
                     /locus_tag="ACFJAG_000389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0009297 - pilus assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV-A pilus assembly ATPase PilB"
                     /protein_id="HFC3979779.1"
                     /translation="MSVGLLRILVQNQVVTVEQAEHYYNESQAGKEVLPMLFSDGVIS
                     PKSLAALIARVFSYSILDLRHYPRHRVLMGVLTEEQMVEFHCVPVFRRGDKVFFAVSD
                     PTQMPQIQKTVSAAGIAVELVIVEDDQLAGLLDWVGSRSTSLLQELGEGQEEEESHTL
                     YIDNEEAEDGPVPRFIHKTLSDALRSGASDIHFEFYEHNARIRFRVDGQLREVVQPPI
                     AVRGQLASRIKVMSRLDISEKRIPQDGRMQLTFQKGGKPVDFRVSTLPTLFGEKVVMR
                     ILNSDAASLNIDQLGFEPFQKKLLLEAIHRPYGMVLVTGPTGSGKTVSLYTCLNILNT
                     ESVNIATAEDPAEINLPGINQVNVNDKQGLTFAAALKSFLRQDPDIIMVGEIRDLETA
                     DIAIKAAQTGHMVFSTLHTNNAPATLSRMLNMGVAPFNIASSVSLIMAQRLLRRLCSS
                     CKQEVERPSASALKEVGFTDEDLAKDWKLYRAVGCDRCRGQGYKGRAGVYEVMPISEE
                     MQRVIMNNGTEVGILDVAYKEGMVDLRRAGILKIMQGITSLEEVTANTND"
     gene            complement(21983..22054)
                     /locus_tag="ACFJAG_000390"
     tRNA            complement(21983..22054)
                     /locus_tag="ACFJAG_000390"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(22019..22021),aa:Arg,seq:cct)
     gene            complement(22075..22521)
                     /locus_tag="ACFJAG_000391"
     CDS             complement(22075..22521)
                     /locus_tag="ACFJAG_000391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003680097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF441 domain-containing protein"
                     /protein_id="HFC3979780.1"
                     /translation="MNFSFVPLFLVTLILLGVVSNNNSITVSATILLLMQQTALVQFV
                     PLVEKHGLNLGIILLTIGVLSPLVSGKAQVPPVAEFLNFKMISAVFIGIFVAWLAGCG
                     VPLMGRQPVLVTGLLIGTVIGVAFMGGIPVGPLIAADILSFVAGKV"
     gene            complement(22525..23499)
                     /locus_tag="ACFJAG_000392"
     CDS             complement(22525..23499)
                     /locus_tag="ACFJAG_000392"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004659 - prenyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HFC3979781.1"
                     /translation="MLENLPYFQRHLPEDLAKVNEVINRAVQSDVALISQIGTYIISA
                     GGKRLRPIMTILAGKAVGYDDEKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRATAN
                     NLFGNAAAVLVGDFLYTRAFQLMVASGSMRVLEVMADATNIIAEGEVMQLMNIGNTDI
                     TEEQYIRVIQYKTAKLFEAAAQVGAILGKASPGHEQALKDYGMYVGTAFQIIDDVLDY
                     SGETEETGKNVGDDLAEGKPTLPLIYLMRQGSEQVANDVRTALENADRGYFEKIRDYV
                     VRSDALAYSIGEARKAVDCAVAALDALSDSEVKDAMIQLAKESLVRVS"
     gene            23723..24031
                     /gene="rplU"
                     /locus_tag="ACFJAG_000393"
     CDS             23723..24031
                     /gene="rplU"
                     /locus_tag="ACFJAG_000393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HFC3979782.1"
                     /translation="MYAVVKTGGKQYKVSVGEKLKVEQIPAQLDSQIELTEVLMIADG
                     ESVKVGAPFIEGAKVTAKVVAHGRGEKVRIFKMRRRKHYQKRQGHRQNFTQIEIVAIA
                     "
     gene            24056..24328
                     /gene="rpmA"
                     /locus_tag="ACFJAG_000394"
     CDS             24056..24328
                     /gene="rpmA"
                     /locus_tag="ACFJAG_000394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HFC3979783.1"
                     /translation="MASKKAGGSTRNGRDSEAKRLGVKAYGNELIPAGSIIVRQRGTK
                     FHAGDNVGMGKDHTLFAKIDGYVEFKTKGALNRKTVSIRPYTGSEE"
     gene            24563..25747
                     /gene="ubiM"
                     /locus_tag="ACFJAG_000395"
     CDS             24563..25747
                     /gene="ubiM"
                     /locus_tag="ACFJAG_000395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016709 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen, NAD(P)H as one donor, and incorporation
                     of one atom of oxygen [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-demethoxyubiquinol-8 5-hydroxylase UbiM"
                     /protein_id="HFC3979784.1"
                     /translation="MSLHSDILVVGAGPAGLSFAAELAGSGLKVTLIERSPLTVLQNP
                     PYDGREIALTHFSREIMQRLGMWDKIPENEIYPLRDAKVLNGRSDYQLHFPQPTEARG
                     EPADCLGYLISNHNIRRAAYEIVSQLDNVSILTDTAVKEVKTSDNEAQVFLENGDILT
                     ARLLLAADSRFSQTRRQLGISSDMHDYSRTMFVCRMKHTLSNQHTAYECFHYGRTIAL
                     LPLEKRLTNTVITVDTDKINSVQNLSPEELAASVKEQLKGRLGDMELVSSIHHYPLVG
                     MIAKRFYGKRSALIGDAAVGMHPVTAHGFNLGLSSADILAKLILEAEQRGQDIGAASL
                     LEKYSSKHMLHAHPLYHGTNMMLKLFTNETAPAKLLRGLVLRAGNNFPPLKKLITKQL
                     TG"
     gene            complement(25936..26091)
                     /gene="rpmG"
                     /locus_tag="ACFJAG_000396"
     CDS             complement(25936..26091)
                     /gene="rpmG"
                     /locus_tag="ACFJAG_000396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009766925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HFC3979785.1"
                     /translation="MRDKIKLESGAGTGHFYTTTKNKRTMPGKLEIKKFDPVARKHVV
                     YKETKLK"
     gene            complement(26123..26356)
                     /gene="rpmB"
                     /locus_tag="ACFJAG_000397"
     CDS             complement(26123..26356)
                     /gene="rpmB"
                     /locus_tag="ACFJAG_000397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007586227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HFC3979786.1"
                     /translation="MARVCKVTGKRPMSGNNVSHANNKTKRRFLPNLQSRRFWVESEN
                     RWVRLRVSNAALRTIDKVGIDVVLADLRARGEA"
     gene            complement(26606..28129)
                     /gene="farB"
                     /locus_tag="ACFJAG_000398"
     CDS             complement(26606..28129)
                     /gene="farB"
                     /locus_tag="ACFJAG_000398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid resistance MFS efflux transporter
                     permease subunit FarB"
                     /protein_id="HFC3979787.1"
                     /translation="MDYPPLKGAALAWVTLSLGLAVFMEVLDTTIANVAVPVIAGNLG
                     AATTQGTWVITSFSVANAVSVPLTGFLAKRIGEVKLFTAAAAGFVIASWLCGIAPNLQ
                     SLVVFRILQGFIAGPLIPLSQSLLMASYPPAKRMLALALWAMTVVVAPVLGPILGGWI
                     SGNWHWGWIFFINIPIGIISAWITWKHLKHRETATVRTPTDYVGLTLMMVGIGALQMM
                     LDRGKELDWFASGEIITLGVVALVCLSYFIVWELGEKYPIVDLSLFKDRNFTVGVIAT
                     SLGFMVYMGTLTLLPLVLQTNLGYTSAWAGLAAAPVGILPVFLSPLIGRFGNKIDMRL
                     LVTASFLTFAFTFYWRTDFYADMDIGNVIWPQFWQGVGVAMFFLPLTTITLSHMKGGQ
                     IAAAGSLSNFLRVLMGGVGVSVVSTLWERREALHHTRFAEHITPYSATLHETAAHLSQ
                     QGISDGQTLGIINNTITQQGFIIGSNEIFLAGSILFIVLIPIVWLAKPPFHSGGGGH"
     gene            complement(28153..29307)
                     /gene="farA"
                     /locus_tag="ACFJAG_000399"
     CDS             complement(28153..29307)
                     /gene="farA"
                     /locus_tag="ACFJAG_000399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid resistance MFS efflux transporter
                     adaptor subunit FarA"
                     /protein_id="HFC3979788.1"
                     /translation="MEAHTDETKLQNTQVKRKRRLTALTLLFALSAAAAGSAFFLWWQ
                     HEEETEDAYVAGRVVQVTPQKGGTVRKVLHDDTDAVKKGDVLAVLDDDNDVLAYERAK
                     NELVQAVRQNRRQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHA
                     RTAVSQAQAAVKAALAEESSARAALGGDVSLREQPEVQTAIGRLKDAWLNLRRTQVRA
                     PADGQVAKRSVQVGQQVAAGAPLMAVVPLSDVWVDANFKETQLRHMKIGQPAELVSDL
                     YGKQIVYRGRVAGFSAGTGSAFSLIPAQNATGNWIKVVQRVPVRIVLNREDVDRYPLR
                     IGLSMTVKVDTSAAGAPVSKTPGAALPEMESTDWSEVDRTVDEILGQSAP"
     regulatory      29548..29592
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00522"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="PreQ1 riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="preQ1"
                     /db_xref="RFAM:RF00522"
     gene            29596..30069
                     /gene="queF"
                     /locus_tag="ACFJAG_000400"
     CDS             29596..30069
                     /gene="queF"
                     /locus_tag="ACFJAG_000400"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0033739 - preQ1 synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046857 - oxidoreductase activity, acting
                     on other nitrogenous compounds as donors, with NAD or NADP
                     as acceptor [Evidence IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preQ(1) synthase"
                     /protein_id="HFC3979789.1"
                     /translation="MSRNNEELQGISLLGNQKTQYPTGYAPEILEAFDNKHPDNDYFV
                     KFVCPEFTSLCPMTGQPDFATIVIRYIPHIKMVESKSLKLYLFSFRNHGDFHEDCVNI
                     IMKDLIALMDPKYIEVFGEFTPRGGIAIHPFANYGKAGTEFEALARKRLFEHDAQ"
     gene            30146..30832
                     /locus_tag="ACFJAG_000401"
     CDS             30146..30832
                     /locus_tag="ACFJAG_000401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:1990397 - queuosine salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine/7-aminomethyl-7-
                     deazaguanine transporter"
                     /protein_id="HFC3979790.1"
                     /translation="MYAFTDAQQQKALFWLVLFHILIIAASNYLVQFPFQIFGIHTTW
                     GAFSFPFIFLATDLTVRIFGSHLARRIIFWVMFPALLLSYIFSVLFHNGSWTGLGALS
                     EFNTFVGRIALASFAAYALGQILDIFVFNKLRRLKAWWIAPTASTVIGNALDTLVFFA
                     VAFYASSDEFMAANWQGIAFVDYLFKLTVCGLFFLPAYGVILNLLTKKLTTLQTKQAQ
                     DRPAPSLQNP"
     gene            complement(31182..32474)
                     /locus_tag="ACFJAG_000402"
     CDS             complement(31182..32474)
                     /locus_tag="ACFJAG_000402"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HFC3979791.1"
                     /translation="MAVFPLSAKHRKYALRALAVSIILVSAAYIASTEGTERVRPQRV
                     EQKLPPLSWGGSGVQTAYWVQEAVQPGDSLADVLARSGMARDEIARITEKYGGEADLR
                     HLRADQSVHVLVGGDGSAREVQFFTDEDGERNLVALEKKGGIWRRSASDADMKVLPTL
                     RSVVVKTSARGSLARAEVPVEIRESLSGIFAGRFSLDGLKEGDAVRLLYDSLYFHGQQ
                     VAAGDILAAEVVKGGTTHQAFYYRSDKEGGGGGNYYDEDGRVLQEKGGFNIEPLVYTR
                     ISSPFGYRMHPILHTWRLHTGIDYAAPQGTPVRASADGVITFKGRKGGYGNAVMIRHA
                     NGVETLYAHLSAFSQAQGNVRGGEVIGFVGSTGRSTGPHLHYEARINGQPVNPVSVAL
                     PTPELTQADKAAFAAQKQKADALLARLRGIPVTVSQSD"
     gene            32551..33519
                     /locus_tag="ACFJAG_000403"
     CDS             32551..33519
                     /locus_tag="ACFJAG_000403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979792.1"
                     /translation="MKLTLALPSLNLDEDEIRIPLCLPAFNKILQYGSPHRQSCTASA
                     FYARYLWCGRLAQRPAQSLNMPSETVALATPVWQKMGLHQANVLTAEYLDVGTDEAER
                     LCRDLSAFYGDIPWRFVPVLPELWLVSLPRAYRWGAKPVLDLGGLLGADDQPDGEDAL
                     EWLRVQTEIQMWLNAHPVNHNRKKRGLPELNGLWLWDSLHGSAQGGTLFADTVWSRFH
                     PNRRALPDSFRAYAETAAHLPDTHHILFMDDLRLTALTGDRERYAAILQQWGERWFAP
                     LYEAVRTGKIKRLDIATDGQHGGTLTFKPTDRRKFWRCTKTFDGIW"
     gene            complement(33720..35189)
                     /locus_tag="ACFJAG_000404"
     CDS             complement(33720..35189)
                     /locus_tag="ACFJAG_000404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="surface lipoprotein assembly modifier"
                     /protein_id="HFC3979793.1"
                     /translation="MVIFYFYFCGKTFMPARNRWMLLPLLASAAYAEETPREPDLRSR
                     PEFRLHEAEVKPIDREKVPGQVREKGKVLQVDGETLLKNPELLSRAMYSAVVSNNIAG
                     IRVILPIYLQQARQDKMLALYAQGILAQAEGRVKEAVSHYRELIAAQPDAPAVRMRLA
                     AALFEDRQNEAAADQFDRLKTEDLPPQLMEQVELYRKALRERDAWKVNGGLSVTREHN
                     INQAPKQQQYGNWTFPKQVDGTAVNYRFGAEKKWSLKNGWYTTAGGDVSGRVYPGNKK
                     FNDMTAGVSGGIGFADRRKDVGLAVFHERRTYGNDAYSYANGARLYFNRWQTPRWQTL
                     SSAEWGRLKNTRRARSDNTHLQISNSLVFYRNARQYWTGGLDFYRERNPADRGDNFNR
                     YGLRFAWGQEWGGSGLSSLFRLGVAKRHYEKPGFFSSFKGERRRDKESDTSLSLWHRA
                     LHFKGITPRLTLSHRETWSNDVFNEYEKNRAFVEFNKTF"
     gene            complement(35431..35688)
                     /locus_tag="ACFJAG_000405"
     CDS             complement(35431..35688)
                     /locus_tag="ACFJAG_000405"
                     /inference="COORDINATES: protein motif:HMM:TIGR01414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HFC3979794.1"
                     /translation="MRAKTRFALRNGVNLQPFAAFNVLHRSKSFGMEMDGEKQTLAGR
                     TALEGRFGIEAGWKGHMSARIGYGKRTDGDKEAALSVKWLF"
     gene            35614..35775
                     /locus_tag="ACFJAG_000406"
     CDS             35614..35775
                     /locus_tag="ACFJAG_000406"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979795.1"
                     /translation="MQNIKSGKRLKIDTVTQSKTGFCPNAGADLPLTAAEQPDRRPSL
                     SVKPPFTPK"
     gene            complement(35872..36285)
                     /locus_tag="ACFJAG_000407"
     CDS             complement(35872..36285)
                     /locus_tag="ACFJAG_000407"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979796.1"
                     /translation="MSFDCFGAFSYQPGSDTRPTNVGDTADFSFSDKPANGVFHYFSS
                     GKTDQKSSEALYDEINITDNYRTDLKQAVKKQLQDLYKTRPEAWEENKKRVREEIIKQ
                     FGISEDVFNKLQQKMPQKINFLIEEQVLTPYILRP"
     gene            complement(36812..37057)
                     /locus_tag="ACFJAG_000408"
     CDS             complement(36812..37057)
                     /locus_tag="ACFJAG_000408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979797.1"
                     /translation="MLKSIELNSHIRNRLAAYLKGRGLDFQTAMQEEEGNKEIAAIVH
                     SGLPTLVRKLYSEQKMQKFFWEKRDLIADYISRRMQG"
     gene            37169..37597
                     /locus_tag="ACFJAG_000409"
     CDS             37169..37597
                     /locus_tag="ACFJAG_000409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopD family protein"
                     /protein_id="HFC3979798.1"
                     /translation="MMFSWFKLFHLFFVISWFAGLFYLPRIFVNMAMIDAPRGNPEYV
                     RLSGMAVRLYRFMSPLGFGAVVLGAAIPFAAGRWGSGWVHVKLCLGLMLLAYQLYCGV
                     LLRRFQDYSNAFSHRWYRVFNEIPVLLMVAALYLVVFKPF"
     gene            37609..38085
                     /locus_tag="ACFJAG_000410"
     CDS             37609..38085
                     /locus_tag="ACFJAG_000410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CYTH domain-containing protein"
                     /protein_id="HFC3979799.1"
                     /translation="MPIEIERRFLIENDKWRQYADEPLLLKQGYLSVEKERTIRIRIA
                     GKRAWLTLKGYISEISRSEFEYEIPLADAEKMMETMCPFKMEKRRYPVRWGGSLFEVD
                     VFLGENSPLVVAEIELPAENADFDRPDWLGREITSDGMFTNAYLSKHPFSSWKNAV"
     gene            complement(38115..38603)
                     /locus_tag="ACFJAG_000411"
     CDS             complement(38115..38603)
                     /locus_tag="ACFJAG_000411"
                     /EC_number="1.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004146 - dihydrofolate reductase activity
                     [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HFC3979800.1"
                     /translation="MLKITIIAACAENLCIGAGNAMPWHIPEDFAFFKAYTLGKPVIM
                     GRKTWESLPVKPLPGRRNIVISRQADYCAAGAETVASLEVALALCAGAEEAVIMGGAQ
                     IYGQAMPLATDLRITEVDLSVEGDAFFPEIDRTHWKEAERTERRVSSKGVAYTFVHYL
                     KG"
     gene            complement(38671..39726)
                     /gene="aroG"
                     /locus_tag="ACFJAG_000412"
     CDS             complement(38671..39726)
                     /gene="aroG"
                     /locus_tag="ACFJAG_000412"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003849 - 3-deoxy-7-phosphoheptulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase AroG"
                     /protein_id="HFC3979801.1"
                     /translation="MTHHYPTDDIKIKEVKELLPPIAHLYELPISKEASGLVHRTRQE
                     ISDLVHGRDRRLLVIIGPCSIHDPKAALEYAERLLKLRKRYENELLIVMRVYFEKPRT
                     TVGWKGLINDPHLDGTFDINFGLRQARSLLLSLNNMGMPASTEFLDMITPQYYADLIS
                     WGAIGARTTESQVHRELASGLSCPVGFKNGTDGNLKIAIDAIGAASHSHHFLSVTKAG
                     HSAIVHTGGNPDCHVILRGGKEPNYDAGHVSEAVEQLRAAGVTDKLMIDCSHANSRKD
                     YTRQMEVAQDIADQLEQDGGNIMGVMVESHLVEGRQDKPEVYGKSITDACIGWGATEE
                     LLALLAGANTKRMARAG"
BASE COUNT         9430 a        11223 c         9941 g         9207 t
ORIGIN      
        1 cgcggatacg gtgcggcggt gtcggaggtt tcggaacgcc tcaaagccgc cgcggtcgaa
       61 cacgccgaac acgcccgcaa atcgtccgcc gcgtatcagg cgcaaaaggc ggcgcgcgag
      121 gaaaaagaaa gggtgcgcta tgtgcaaacg cttaaaatca ttgaaaaacc tgtgtaccgc
      181 aatgcctgtt ttgatgctga cggcgtgcgc gaactcaacg ccgccgttga cgacggcggc
      241 taagccgccc gccgatttgg tgcggccctg cccgaaactg ccgcaccttg aagggaacac
      301 gggcgcggac gtgctgccgt gggccctgaa ggcggccggt atgtataacg actgcagggc
      361 gcggcacggc gcgctggtac gggcgttggg cgcggattga gttgtcaacc ggaagtttgc
      421 aaccgaaccg tcggttccgg gttggcggcc gcatcggggg aagtgtcggc attccccccg
      481 attttttaca tatcgggcgg acgcggcaaa tttttgccgt tttgtttgcg cgaagggggc
      541 gttatacaaa attatcaggc gcaccaataa tcgggcggaa atgaaaatgc cgtaccctat
      601 gggcaggctt cgcactctga aaggttcagg cggcattttt attggaaggc ttttttttgc
      661 aaccgcctta cacaaagcgg ttttttgtgt aagaactgcc ataacagccg cctgtcatcg
      721 tcaggagcgg ctaatgcctt taaaattcca accaagggaa cgttcagtta tcatgtgcga
      781 ctttcgcggt tatgaagaac cggaaatggt caagaaacgc cctgtcgtcg tcatagcgcg
      841 aaacaggcac aacggcaaac tggtaacggt cgtaccctta agcagcacag agcctgtccc
      901 tttggcggac tgccaccaca aaatgagtga aaacccctta ccggacaagc cgcacatcca
      961 atgtcgggca aaatgcgata tgacggcaac agtcggattg gcacgattag accgatacaa
     1021 acccaaaggg cgcgaccgtt gcatcccaat aatcagtgaa gaggattttc aggcggttaa
     1081 aacagccgtt gccaaggcat tcaaactgta ctagaataaa accgttccct taaaggggct
     1141 tgcaagactg ttccgaaata tgggcagccg cgcacgggcg acaggcgatg acaagccgtc
     1201 cgtgcgtgtg atggggcgcg gaatgcgccc cttgtcgtat ctgcaaacgc ctacaaatcc
     1261 ccaatcatcc cttcaataaa aatgccgtcc gaaccttcag gcggcatttt ccgtttacct
     1321 tgccgcagcc ttgccgtaaa tgccttcaag acatgcggct atgcggccgg aggcgtcttt
     1381 gtccgcatat ccccgcaaca cttcgagggc cgcggcggat cttttcagga ttgaacgggt
     1441 ttcgtgccag accgtcagca tcgtaaccgc ctgtctgttg ccaagctgtt tgagcggtgc
     1501 ggaaacgtct ttgcccgatt caatcatccg tgtgccgtaa taaaccatag cggcaatgtc
     1561 ggctaaagag ttgccgtcga tgggcagggc gggttgcggc gcgggcaacg gttcgcggtc
     1621 ggggacttcg ccggccaaac ccgtgtgcag tgtcaatgcg tggacgtagg cgacggcttc
     1681 gggcagtttg tcggcgggga tgccttcgac ggcttcgacg ttgaagcgtt ggtgtatcat
     1741 actgtacgcg gaggagtagc ctatgcgttt gcgcccgaca agcgcggcaa ccgcccggcg
     1801 caatccggta cggtcgtcgg cggtggtttt gggagtaatt tggtagccgc ctgttttgcg
     1861 gatttgaggg ataacctctt caaatatcca gtcttggaat ttgacggctt cggctttgcg
     1921 tgaacggaag atgactcggt agagattcgg ctcgttgatg aaaagtaatt cttggttgcc
     1981 tttttttgtt gcaacgctgg atttttgaat gccctggtct tttaatggca actgacgggc
     2041 attttgaatt tgaagaattt ccgcaacatc gccaaggcaa aaccaaggtt cagcccccaa
     2101 gatttgagta cggacatttt gagatttgaa agaaaataca gaaatggtgt tttgcatttt
     2161 aagctccacg aaagtttgaa agcctctctt cgaccaagaa gaggtaggcg gacgtttcag
     2221 gttggtcgac tgctcgtgga aacagcacat ccggagatgt cccgaaagtc cgcccgttgg
     2281 ctttttcagc aagggtgtat gtttaacata cacccttcag ggaactctta tcaaaacaaa
     2341 agccgcaagc gcggcaataa ccacgaaaga aacaggcgac caaacctgtg aaccgaactt
     2401 tactattatt ccgctattgc gtcaatattt tggggggaag cacggacgga gctttgttga
     2461 aagtttaaaa cttggacagt attcatggta gaatgacctt tctatttcat ggtagataga
     2521 cgcggaaaga gagttgccgc tctgctttcc acctgcccaa atcaagttac agcttggttt
     2581 gggcttcttt tttacctgca atcagcaagt gttgaaatta taatttgtat ctacgattca
     2641 tgcaagccat ttctattatt ttttcagttt ttctaattca agttcatgtt tcagcttttc
     2701 ttttacccat ttggagaagt ctaaattatt ggaaaattcc aataaattag cttctttttc
     2761 agtgttaaat gaaacgtgct ttaaaacgcg cttagattcg tagctttttt tggattgttt
     2821 ggttgggttc attcttcccc cttgttgaaa ataatcgtag atacatttta ctcgatttaa
     2881 aatcataggg caacaaaaaa accgccaagt ttgcggcttg gcggcggtcg ggctatttta
     2941 agaactcttt tcggattttt tctttaaccc attgggaaaa actaatttta tttgcacctt
     3001 atttgcacct tttttataaa tataattcaa atatttgatt tatatattaa tttaattaaa
     3061 tattacatga ccctgcatag gggcgacgga aaggcggcgc gggggaaggg tgtgtgtatt
     3121 gtcgttcatt gtcgatattt catcattgcg gactcaattt caatccggaa caaccttcat
     3181 ttttggggaa atccgcgtca tgaaagagtc cagcagtatg gttaccggcc cgtcgttgca
     3241 gagcgacacc tgcatatgcg tgcggaaacg ccctgtttcg acatgaatcc cgtgtccgcg
     3301 taacagctcc gccgttcgca ggtaaagccg ttgcgcctgt tctgccggcg cggcttggga
     3361 aaacgaaggc cgccgcccgc ttgccgcgtc ggcataaagc gtaaactgcg acaccagcag
     3421 caccgcgccg ccgacatctt tcaaagacag gttcagcttg cccgcttcgt cttcaaacac
     3481 gcgcaaatgt gcgattttgt cggcgatata gcgtgcatct ttttctgtgt cgctatgcgt
     3541 tacaccgagt aacacgacaa acccgccgtc gattttgccg caggtttccg tgccggcttc
     3601 ggacacgaca tccacctttg cacctaccgt tttctgtatg accgcacgca taagccgtcc
     3661 tccttacctg aacgtgcaat gccgtctgaa aaggcttcag acagcatcgg tatcggaaat
     3721 gccattacgg tttgacaccg ttttcttcca aaagggcatc gattttcaag cgggcttttt
     3781 cctgcctcaa accttgttcc aactggtttc tgaccaactc gaaaggctgc gcgtcggggt
     3841 ttttcccgac cgcgccgagt ttgaacaggt aatagcgttc gcccaatttg accggattgc
     3901 gggtaacgtc gccacggttc ataccggcaa actgcgaagc cagcggctcg ggaagctgct
     3961 gcgccataat gaaaccgtcg aacgcctgct cgtcgttcgg ataacgcttc atcagccctt
     4021 caaaagacag ccctttgagc aggagctgct gcgcctgacg cgcctcctct tcggttgcga
     4081 agctgacctg ctgcaatttg atcatgcgga tttgccgctc ataaaactga cgcagtgcgc
     4141 tttcggaaac cgtttccgaa cgttccagaa aacggacgta ctcctcggca taaaaagacg
     4201 cttcggcgat tttaaagcgg ttttggacat ccttatcctt atccaaacct tccttcaatg
     4261 ccctgttttt caaaacttcc aaagtttgca gccggcggac ggcatcgttt cggattgcct
     4321 gcccgtccgg tctttgggac tgctccgcat gccggtctgc ctgctgcatg atctgcgcca
     4381 ccagcgtatc caccaaagcc gggtcgattt cgggtgcttt ggctgccgca aaacctgcca
     4441 acattgcagc aataactgcg gcagcggtct ttttctgttt catggtattc cctgtcctgc
     4501 gcggcggcaa aacgcctgta tgaacgtctt gccgccgtat cccgttttca gattattttg
     4561 caggtttgat gtttgcctta cccaacagcg caccgacggc acggtcaatc cgttccgcct
     4621 gaaggttgcc ggcaatctgt cctttcattt cgtcaaaaga aggcactttc acctcgcggc
     4681 tgtcgttgac ataataaacg ccgtagaaat cgccgttttt cagcggcgtt gccgtaaatt
     4741 cgcctttttt caagtcctta attgcctgat aaagcggcgg aacaccctgt tccaaatctt
     4801 tcagcggcac atatccgtcc ggcgcgccgg tccgtttggt gcggtcgttg agcgagtatt
     4861 gtttcaaaac ggcatcaaaa ccttttttcg ccttcaaatc ggcaaccgct tttttcgcat
     4921 tttcttcctt gtcggtcagg atttcgccca actggacttc ctgcgtgcct ttataaaaac
     4981 cgctgatatt gtcgtaaacg gcttttactt cctgctcgga aaccggttgg gttttggcga
     5041 tatgcagtgc gtatgcctcg ccgttcaagc catattttac cgcctgccaa acggttttga
     5101 aggacggttt cttgtcgtcg cccgactttt tcgcttcggc acgcaatttg gcaagcgcat
     5161 ctttaaactc tgccgaccgg tcgagtttca ggcgtttcac ttcctgtgcg accacggtgt
     5221 tgaccacttc gttttccagc agggattggc gcagttgcgg cgtgtcttcg gcacggctgt
     5281 tttccgcacg gaatgcggca acctgcgcat cgatgacgga actgtcgatt ttctgaccgt
     5341 taacggttgc cagcgtttgg gcaaacaggc tgccggaaca ggcaagcagc gcaacggaag
     5401 tcaggatttt tgctttcata atcttctctc tttaaatttt aaattgaaat attcaggcag
     5461 acttcattca gtccgccgta tggaaatact cgtcaggggt agccgcccgg atgccgagcg
     5521 cgtgaatcat gccgcctgaa aataaatctt tgagcagcga tttgaccgtt ttctgacggt
     5581 tcagacggct taaaccttca aaacggccgc tgacgaccaa aacggcataa tgtccgccgc
     5641 cggtattgcc cgcgtgtcct ttgtgcagat ggctctcatc gccgatttcc aacaccagag
     5701 gatcgagcgt ctgcaggcgt tcgcggatca aatcgacagc cggcattatt tgaacaccgc
     5761 tttaaacggc ttgatcagca cttcgctgta cacgccggca tgaacatagg gatcgtcttc
     5821 agcccaagcc tgcgccgcat ccaaagactc gaactgtgcc acaatcaagc tgcccgaaac
     5881 acgttcggga ttgtccggca gcaggtttgg gcctgccgtc agcagacggc cttccgattt
     5941 cagcgtttcc agccgtttaa agtgttcggg acgtgccgcc atacgcgctt catgcacatc
     6001 ctccccgtct gttgccagca acataaaata ttccacagtc aatcctcctt tttcagatag
     6061 gtactcagat aaataccctg aataataaag aaaaaaagca tcagcgcagt cgaaccgaac
     6121 atcttatagt taacccattg cgcttcaaac ctagtaaaca caaaccagtt ggcaataccc
     6181 ataaaaatca gaaaaccgac ccacatatat gtcaattttc cccatacggc atccggaagc
     6241 tgaatctccc tgccgatact cgctttcaag ccgtttttac ccgcaaggtg gctgcccagc
     6301 aggaataacg ccccgcacca gaacaatact gtcggcttcc acataatgaa gcggctgtcg
     6361 cccaaaacaa tggttgcgcc gccgaatacg acaatcagca ccagtccgac ccactgcatc
     6421 gtatccagcc ttttatgctt ccaatacagg aaagccgcct gaaccacgcc tgcaaccaag
     6481 gcaaccgccg cagcggcaat catatttttg gtaacggtat aagtagcaaa aaacaagatg
     6541 acggacaaaa ggtcgctgac aaatttcata tccaaatgag aaagcaaatc aaataaacgc
     6601 taatcataca ggcagaaccc tatctttgca cctgcaaaac caacaaattt tgttttgatt
     6661 aatgcaaata tgcacagatg tttttgaaaa aagatggaaa tatgtcataa tttataaaat
     6721 tggctttaaa atacagcttc ggccggaacc tctgcctatc cgcaccctat cgtccgtatt
     6781 gcctatgcct gatgacgaaa tttacagact gtacgcggtc aaaccgtatt cagccgccaa
     6841 cccacagggg atacatcttg caaaaacaac agacaaatca aactgattgc cgcctccatc
     6901 gcagttgccg catcctttca ggcacatgcg cgactgggcg gactgaatat ccggtccaac
     6961 cttgacgaac ccttttccgg cagcattacc gtaaccggcg aagaagccaa agccctgcta
     7021 ggcggcggca gcgttaccgt ttccgaaaaa ggcctgaccg ccaaagtcca caagttggac
     7081 ggcaaagccg tcattgccgt ttcttccgca caggcagtcc gcgatcccgt cttggtgttc
     7141 cgcatcggtg caggcgcgca ggtacgcgaa tacaccgcca tcctcgatcc tgtcggctac
     7201 tcgcccaaaa ccaaatctgc actttcagac ggcaagacac accgcaaaac cgctccgaaa
     7261 gcagagtccc aagaaaatca aaacgccaaa gccctccgca aaaccgataa aaaagacagc
     7321 gcaaacgcag ccgtcaaacc ggcgcataac ggcaaaaccc ataccgtccg caaaggcgaa
     7381 acgctcaaac agattgccgc cgccatccgt ccgaaacacc tgacgctcga acaggttgcc
     7441 gatgtgctgc tgaaggcaaa cccaaatgtt tccgcacacg gcagactgcg tgcgggcagc
     7501 gtgcttcaca ttccgaatct gaacaggatc aaagcggcag cacccaaaaa aatcaaagcg
     7561 gaacaaccca aaccgcaaac ggcgaaaccc aaagccgaaa ctgcatccat gccgtctgaa
     7621 ccgtccaaac aggcaacggt agagaaaccg atagagaaac ctgtcgaaaa accggttgaa
     7681 aaacctgaag caaaagttgc cgcgcccgaa gcaaaagcgg aaaaaccggc cgttcgaccc
     7741 gaacccaaac ccgcagtgtc cgaaactccg gcttcggcga cagaacgcca acccggacct
     7801 gtacccgctg caaatactgc cgcatcggaa accgctgccg aatccgcccc ccaagaagcc
     7861 gccgcttctg ccatcgacac gccgaccgac gaaaccggta acaccgtttc cgaacctgtt
     7921 gcggaaacag ccagtgaagt tgccgccgaa cccgttgccg aacctgtcga acaggtttct
     7981 gccgaagaag aaaccgaaag cggactgttt gacggtctgt tcggcggttc gtacaccttg
     8041 ctgcttgccg gcggaggcac ggcattgatc gccctgctgc tgcttttacg ccttgcccaa
     8101 tccaaacgcg cgcgccgtac cgaagaatcc gtccctgaag aagagcctga ccttgacgac
     8161 gcggcagacg acggcataaa aatcaccttt gccgaagtcg aaactccggc aacgcccgaa
     8221 cccgctccga aaaacgatgt aaacgacaca cttgccttag gtggggaatc tgaagaagag
     8281 ttatcggcaa aacaaacgtt cgatgtcgaa accgatacgc cttccaaccg catcgacttg
     8341 gatttcgaca gcctggcagc cgcgcaaaac ggcattttgt ccggcgcact tacgcaggat
     8401 gaagaaaccc aaaaacgcgc ggatgccgat tggaacgcca tcgaatccac agacagcgtg
     8461 tacgagcctg agaccttcaa cccgtacaac cctgtcgaaa tcgtcatcga cacgcccgaa
     8521 ccggaatctg tcgcccaaac tgccgaaaac aaaccggaaa ccgtcgatac cgatttctac
     8581 aacaacctgt tctcaaacaa ccatatcggc acagaagaaa cagcttccgc aaaacctgcc
     8641 gcaccctccg gactggcagg cttcctgaag gcttcctcgc ccgaaaccat cttggaaaaa
     8701 acagttgccg aagtccaaac accggaagag ttgcacgatt tcctgaaagt gtacgaaacc
     8761 ggtgccgtcg cggaaactgc gcctgaaacg cccgatttca acgccgccgc agacgatttg
     8821 tccgcattgc ttcaacctgc cgaagcaccg gccgttgagg aaaatgcagc ggaaatcact
     8881 ttggaaacgc ctgattccaa cacctctgag gcagacgctt tgcccgactt cctgaaagac
     8941 ggcgaggagg aaacggtaga ttggagcatc tacctctcgg aagaaaatat cccaaataat
     9001 gcagataccg gtttcccttc ggaatctgta ggttctgacg cgccttccga agcgaaatac
     9061 gaccttgccg aaatgtatct cgaaatcggc gaccgcgatg ccgctgccga gacagtgcag
     9121 aaattgctgg aagaagcgga aggcgacgta ctcaaacgtg cccaagcatt ggcgcaggaa
     9181 ttgggtattt gattcccaac tgccctttcg cagatcaagg atgccgtttc agacggcatc
     9241 tttttttgcc ttatcggtgt aacggataaa gtttgaaccg gcacaggctc aaacagcagg
     9301 ccgacggcaa caaaatgccg tccgaaaccc ctaaaggctt cagacggcat tggcggcggc
     9361 ggtatcaggt attcgcatag gcaaccgaat cgtcgccgct tttcttttga acgaactcga
     9421 ttttgcatcc gtcggggtct tcgacgaagg ctatcacggt tgtgccgtgt ttcatcagac
     9481 cggcttcgcg gacgacgttt ccgccctgcc gcttcacgcg ttcgcaggct tcgtaggcat
     9541 cgtccacttc aacagcgatg tgtccgtagg cgttgcccaa gtcgtatcgt tccgtatccc
     9601 agttgtgcgt cagttccaaa accgtgctgt cggtttcgtc gccgtaaccg acgaaggcaa
     9661 gggtaaatct gccttcggga tagtcttttc ggcggagcag tttcataccc aaaacgtttt
     9721 ggtaggaatc gagggatttt tcgagattgc ccacgcggag catagtatgg agtaagcgca
     9781 tttttcgtgt tcctctcggt ggtggttaaa cttcgatttt attcggcgta aacgtctgcc
     9841 atttgttgca ggcgggacag tgccagaaaa agacttggga tttgaagtgg cagttgcggc
     9901 aacggtacat cacgctgcgc tggagctgcc gtccgataac cgaacgcatc atgtcggcat
     9961 cggctttcca agccggatcc aaatcgctga gtttcaaacc gagcaggcgg tacacgccgt
    10021 taaggtcggg cttgcggcgg acaagctcga cggcggtttg cgcggcttct ttctcgccct
    10081 taagcagcag ggatttctcg tacacgacat tgatcaggtc aagttcggga aacgtctgca
    10141 tatatcctgt cagacggttc aagccttctt caggttttcc ctgcgcggca taggcttcgt
    10201 aaagcttctc gccgaccatg ctcaagtatg catggttttg ctgctcgatg gcggcatagg
    10261 cttcgacggc ggcagggaaa ttgccttgtc ggtgttcaat gtcgcccaaa atcatgttgg
    10321 cgcgggtgca ttttttgttg gcttcgagtg ccttgccgac attgaaacgc gcggcatcga
    10381 aattggactt gaacagcgcg gcttgggcaa gttcgcaata aaactgtgca atctcaaact
    10441 gatatgtctg ttcgtcgtga ctaagaagtt gggcggtttc aaccgctttt tcccaatccc
    10501 tgtcctgctg gtagatattg agcaggtgct gtctggcttc acgcgccatt tcaccgtctt
    10561 gcagccccaa aaaaatctgt tcggcacgat cgaccaaacc cgcgctttgg tagttttgcg
    10621 ccaattcaaa caggacgcgc gcgcgctttt cgccgaccgt atcgggagaa tcgagcattg
    10681 tccggtgtat gttgatggct ttgtcgtttt cgccgcgctg acggtaaagt ttgccgaggg
    10741 taaggttcaa atcatacgat tgcggccggc cgtcgacgac ttccgccaac tcccttgccg
    10801 cgcgcccgct gttgcggtcg accaaagcgt ccaggctttt ataaaatccc gaagggatgc
    10861 tttttgcctg cttcaatacg gttttcatat ccacgcgggc ggcaaaccag cccatcgtga
    10921 agaagacggg caaaaggata atcggcagca ggataatcca caattcgttg tccatatcgg
    10981 ctttcttaag gctgtttggc agattcggca gcattttgta tcggcggtgc agtcaatttc
    11041 tgtccgctca agcgcgcact tttcttcact tccgcacgca ggcggctgtt ttcgccgcgc
    11101 aaggacagca gccgcccgaa cagggcaaac attccgaaca cgatgccgac gacaaacgcg
    11161 ccgaacaata cgacaatcag cggcagattg acactctgcc ccggaagata ggaaaaggta
    11221 acggcatcca tattaatgac ggcaagcagc aggaagagca gcaggataat gattttgatg
    11281 acggtataga taagtttcat gtttgctccg taaataaaaa cgccgcacgg acagcttcgc
    11341 actctgaacc aagattgcgt tagtttaaac gatttgcacg gtttcggata gaatgcggca
    11401 gcgtgttcgg acggcatacg gagtatgcga ttgccgacaa ttttaccaaa tacaccgctc
    11461 ctttccattt gaaaaataac ggattggaca ccgcatcgac agaaaaaccc gccgcgcact
    11521 tgtcaaaacc ctgtttgcag gcgtatcttt acaaccttca aattcaaacc gttcattgaa
    11581 acatatcaga ataagaaagg ctttacatca tgagcagacc cgtacccgcc gtattcggca
    11641 gcgtttttca cagtcaaatg cccgtcctcg cctaccgcga aggcaaatgg cagccgaccg
    11701 aatggcaatc ttcccaagac cttacccttg cacccggcgc gcatgccctg cattacggca
    11761 gcgaatgctt tgaaggtttg aaggccttcc gtcaggcaga cggtaaaatc gtgctgttcc
    11821 gtccgaccgc caatatcgcg cgtatgcggc aaagtgcgga cattttgcac ctgccgcgcc
    11881 ccgaaaccca agcttatctc gatgctttgg tcgaactggt caaacgtgcc gccgacgaaa
    11941 ttcccgatgc gcctgccgcg ctgtacctgc gcccgacctt aatcggtacc gatcccgtta
    12001 tcggcaaggc cggttctcct tccgaaaccg ccctgctgta tattttggct tcccccgtcg
    12061 gcgactattt caaagtcggc tcgcccgtga aaatcttggt ggaaaccgaa cacatccgct
    12121 gcgccccgca tatgggccgc gtcaaatgcg gcggcaacta cgcttccgcc atgcactggt
    12181 tgctgaaggc gaaagccgaa tacggcgcaa atcaagtcct gttctgcccg aacggcgacg
    12241 ttcaggaaac cggcgcatcc aactttatcc tgattaacgg cgatgaaatc attaccaaac
    12301 cgttgacaga cgaattcctg cacggcgtta cccgcgattc cgtgctgact gtcgccaaag
    12361 atttgggcta taccgtcagc gaacgtaatt tcacggttga cgaactgaaa gctgctgtgg
    12421 aaaacggtgc ggaagcgatt ttgaccggta cggccgccgt catctcgccc gttacttcct
    12481 tcgtcatcgg cggcaaagaa atcgaagtga aaaaccaaga acgcggctat gccatccgta
    12541 aggcgattac cgacatccag tacggtttgg cggaagacaa atacggctgg ctggtcgaag
    12601 tgtgctgatg ctttaaataa aaaaaatgcc gtctgaaacc cgtttggcgt ttcggacggc
    12661 attttcgcgt tcggaccgtt tccgccgcac ctgcagcaag tcggtacaaa ggcaatcggt
    12721 taaaacaagc gtccgcattt cccatcccgc ctgccgcaag tcgggcattt ccctggaaat
    12781 acgcttcaaa cggcaaaccg ccgcccgaaa ccgatactcg gcacggacgg cgcacggatt
    12841 tgaaaacggc ggattatccc tcggtgctca aggcattgat gctgtaaccg ccgtcaacat
    12901 aagtgatttc gccggtaatg ccggacgaca ggtcggacag caggaaggcg gcagtattcc
    12961 cgacttcttc gatggtaacg ttgcggcgca gcgggttgtg ggcggcgacg tgtcccaaga
    13021 gtttgccgaa atcggcgatg ccggaggcgg cgagcgtttt gatcgggccg gcggaaatgc
    13081 cgttgcagcg gatgccctct ttacccagac aggcggcggt aaagcggatg cctgcctcaa
    13141 ggctggcttt tgccataccc atcacgttgt aattcggaat cgcgcgtacc gcgcccaagt
    13201 agctaagggc gacgatggcg gagtttctgc cgcgcatcat cggacgggcg gcttttgcca
    13261 atgcgggcag gctgtatgcg gaaatttcgt gtgcggtgtt gaacgcttcg cggctgatgc
    13321 tgtcgaggaa gtcgccgctc aaggcttctt tcggcgcgaa gccgatggaa tgcaccaaac
    13381 cgtccaagcc atcccaatgt ttgcctaagt cggcgaacac ttggttgatt tcgtcgtcgc
    13441 tggcgacatc gcagcggaat acgagttcgg aatctaattc cgccgccatt ttgcggacgc
    13501 gctcttccag tttgtccaca acgtaggtaa acgccagttc cgcgccctgt tcgcggcagg
    13561 ctttggcgat gccgtaagcg atggaacgct cggaaatcat gccggtaatc agaatttttt
    13621 tgccttgcag aaaacccatt ttgtatcctt caaatagtgt tcggttcgtt ctaaaccgtt
    13681 gattatagca aattgtccct gtttctgtgt tttcacgttg cagcgtgcag acggcaatgc
    13741 cgtccgaagc ggatttcaga cggcattgga cgtttcaaat acggtttaag gcatcagatg
    13801 ccgcgcaaga gttcgttcac gctggttttg gcgcgggttt gcgcgtccac gcgtttgacg
    13861 atgacggcac agtaaaggct gtggctgccg tctttggaag gcaggctgcc ggacacgacg
    13921 accgaacctg ccggtacgcg gccttggtag atttcgcctg tggtgcggtc gaagattttg
    13981 gtggattgac cgatgaacac gcccatcgaa atcacgctgc cttcttcgac aatcgcgcct
    14041 tcgacgattt cggaacgcgc gccgatgaag cagttgtctt caatgatggt gggtgcggcc
    14101 tgcaggggct cgagtacgcc gccgatgccg acaccgccgc tcaagtggac gtttttgccg
    14161 atttgcgcgc aagagccgac ggtcgcccaa gtatcgacca tcgcgccttc gtcgacgtat
    14221 gcgccgatgt tgacgtaaga cggcatcagc acggcgtttt tggcaacaaa gctgccgcgt
    14281 cgggcaaccg cacccggaac tgcgcggaag cctgcgtttt tgaactcgtc ttcagaccag
    14341 tcggcaaatt tggtcggcac tttgtcgaag tatttgttca cgccgtcgtt gaggacttcg
    14401 ttgtcttgga tgcggaagga cagcaacacg gcttttttcg cccattcgtt gactttccac
    14461 tcgcccacgc ccaagcgttc ggcgacgcgc agtttgcctg aatcgagttg gcggatggtt
    14521 tccaacacgg cttctttgac ttcgggggca acggtggtcg gagtgatgtc cgcgcggttt
    14581 tcaaaggcgg tttcgataat gttttgcaaa gacataatgt ttccttggtt cgagatattt
    14641 cgggacgctt gccggtattg ttcagacggc atggcggttg gaacaaacgt gctattgtgc
    14701 catacaaacg cccgcccgtc agccgcgccg caggcttgcc ggatgccggc gtttcggaat
    14761 cgggcgggcg gcaggcatat gtctttttcc gcgcccgaat caatacagaa aggcggcggt
    14821 acttttatgc cgcgccgccg cctttcagac ggcattcgcg gtaaaacgcc atcagccctt
    14881 cggtcgaggc atcgtgtacg gacgtgccgc cttccaattc gccgatgatg gtttttgcca
    14941 actgtttgcc gtactcaacc ccccactgat cgaaggggtt gacgttccat atcgcgcctt
    15001 ggacgaaggt tttgtgttcg taagccgcca tcagcatacc cagattgcag ggcgtgaggc
    15061 ggtcgagcag gatgctgttg ctggggcggt tgccggggaa ctctttgtgc ggcgcgaggc
    15121 gttcgcgttc cgcttcgggc aaatctgcca gttcggcgcg tgcttcgtct aaggttttac
    15181 ccttcatcag ggcttccgct tgggcaaagg cgttggcaac ggtaaaacgg ctgcgtccgt
    15241 cctccgcgcc ctgcgccgtc atcgggacga taaagtcgca gggaatcagg cgcgtgcctt
    15301 ggtggagcag ttggaaatag gcgtgctggc agttgacccc ttcaccgccg aacacgatgc
    15361 cgcccgtttt gcacgcggcg ggactgccgt ctgaagcgcg gcttttgccc aaactctcca
    15421 tatcgagctg gttcagccac gccggcagca ggcgcaggtt gtggctgtac ggaacggcgg
    15481 tctgcccgtc cgcgtgctgg aaattgttat accacacggc aatcagtgcc atcagaacgg
    15541 gaatgttgcg acgcgggggc gtgtggaaaa aatggctgtc catcgcgtgc gcccccgcta
    15601 gcagttcgcg gaaacgcgcc ccgccaaccg caaccatcac gggcaaaccg acgggcgacc
    15661 agacggaata gcgtccgccc acccagtcgt acatcgcaaa cacgcgttcc gccgcaatgc
    15721 cgaaactttg cgccgcttcc gtatcggcag acaccgcgca aaaatggcgc gccgtttcgg
    15781 attccgagaa ccccgcaccg cgataccacg ccttgaccgc ctctgcattg agcagggttt
    15841 ccggtgtttt aaaggacttg ctggcaacgc aaaacattgt tgtttcgggg ttcagacggc
    15901 ataagacctc atccaggcag gcagggtcgg cattagaaac aaaatggacg gaaatctgcc
    15961 gtctgaacgg ctcgagcgcc tgcacgcaca ttgccggccc gaggtcggat ccgcctatgc
    16021 cgatgtggac aaaatccgca atccgttttc cggttatccc ctgatataaa ccgtcgtcca
    16081 aactgtgtgc aaacttcaac gcacgattta actcgcggcg gatttcgggc aacacgtccc
    16141 tgccgtccgc ataaacggca tccgcaccgt cgggcaggcg caaagccgta tgcagcgcgg
    16201 cacgcccctc gctgccgttg actttcgcac ccgtccgcaa agcacgcatt ttcccttcca
    16261 aatccgccgt ctccgcaaga cggcagagca gttgcagcgt atcttcgcca aaacggtttt
    16321 tgctgtaatc gaacaacatc ccgtccaaac gctcatgcat acgctcaaaa cggtcgggtt
    16381 cggcagcaaa gcggtcgcgc aaaaggatgt ggcacgtatc ctgataatgg cgttcgagcg
    16441 cataccatgc acgggtaaag gcatccatct gttttccttg atttttcaga accggattaa
    16501 aatatagcag aatgtagtct aacaaacggc agacacttta gcgaatctca ggaacaccgc
    16561 ccgccgcgtc caataacacc ttatttccat atggcgaaaa tatagtgaat taacaaaaat
    16621 caggacaagg cggcgggccg caggcagtac ggatagtacg gaaccggttc gcttggtgct
    16681 tcatcacctt agggaatcgt cctctttgag ccggggcggg ccaacgccgt accggttttt
    16741 gttaattcac tataccctcc ggccggcatt tgacccgcaa caatatcctg caagatttat
    16801 tgtgtgcgca taaatgccgg acagccgcct aaattaaggt ataatcgcat ccgattctgt
    16861 cccgtttgcc gcccgcaggc gggatgtcgg cggttttcat cttaccggga acacgccgat
    16921 actgtttttt aacgatgttt cttacatttt attccaatta ctttacgggg ctagaatatg
    16981 gctaaaaatg ggggattttc tttgttcgca aagaaagaaa aacgctttat ctttgaaggc
    17041 aggcattctg cctccgacaa actggtcaac ggcgaagtat ccgcgtttac cgaagaagag
    17101 gcacgcaaaa aactggcaaa acgcggcatc cgcccgttgc agattacccg tgtgaaaaca
    17161 agctccaagc gcaaaatcac acaagaagac attaccgttt tcacccgcca gctttccacg
    17221 atgattaaag cgggcctgcc gctgatgcag gcatttgaaa tcgtggcgcg cggacacggc
    17281 aacccgtcta tgacggaaat gctgatggaa atccgaggcc aagtggaaca gggcagctcg
    17341 ttgagccgcg cattctcaaa ccacccgaaa tatttcgacc gcttctactg caacctggtt
    17401 gcggcgggcg aaacgggcgg tgtattggaa agcctgctgg acaaattggc aatttacaag
    17461 gaaaaaaccc aggccatccg caaaaaggta aaaaccgcgc taacctatcc ggtatccgtc
    17521 atcgccgtcg ccatcggttt ggtattcgtg atgatgattt tcgtactgcc cgcctttaaa
    17581 gaagtttacg ccaatatggg cgcggagctt cccccactga cccaaacagt gatggatatg
    17641 tccgactttt tcgtctcata cggctggatg gtgctgatcg cactgggctt tgccatatac
    17701 ggcttcctta aattgaaggc gcgttcgatt aaaatccaac ggcgtatgga tgccatactg
    17761 ctgcgtatgc cgattttcgg agacattgtc cgcaaaggga cgattgcccg ctggggcagg
    17821 acgacggcaa cgctgtttgc cgccggcgtg cctttggtcg atgtattgga ctccactgcc
    17881 ggcgcggcgg gcaatttaat ctatgaagaa gccacccggg aaatccgtac gcgcgtcatc
    17941 caaggtctgt ctatgacttc ggggatgcgt gcgacggaac tgttccccaa tatgatgttg
    18001 cagatgtcct ccatcggcga ggaatcgggt tctttggacg atatgctcaa caaagccgcc
    18061 gaattttacg aagacgaggt ggacaatgcg gtcggcaggc tgtccgctat gatggagccg
    18121 attattattg tgattttggg cttggtcatc ggtacgcttc tggtcgctat gtatctgccg
    18181 ctgttcaact tgggcaacgt ggtcgcctga tttgccgcac agatccggcg cggattggtt
    18241 ctgcgccggt ttgtttttgc tttgaatata tcaaggacaa aatatgtctg atttgtctgt
    18301 attgtcgccg tttgccgtgc ctttggcagc agttttgggg ctgctggtcg gcagcttcct
    18361 gaatgtcgtc atttaccgcg tacccgttat gatggaacgc ggctggacgg tatttgccaa
    18421 agaacattta aacctgccgc tgaccgacga tgaaagccgt accttcaacc tgatgaagcc
    18481 ggattcctgc tgtcccaaat gccgtgtgcc gatacgcgcg tggcagaaca tcccgattgt
    18541 cagttacctg ctcctgcgcg gcaaatgcgc ttcctgccaa accaaaatca gcatacgtta
    18601 tcccttaatc gagctgctga ccggcgtatt gttcgggctg gtcgcctggc aatacggctg
    18661 gtcttggatt acgctgggcg gtttgatact gaccgcgttt ctgatttccc tgacctttat
    18721 cgatgcggac acccaatacc tgcccgactc gatgacatta cccttgatct ggctggggct
    18781 gatatttaat ttggacggcg gcttcgtgcc tttgcagtct gccgttttag gtgcggttgc
    18841 cggctatagt tcattatggc tcttatgtgc agtgtataaa ctgctcacag gaaaaaccgg
    18901 tatgggcaac ggagatttca aactgattgc cgcattgggc gcgtggctcg gcatatccgc
    18961 attgcccgtg ctgatttttg tttcctctct gatcggtttg gtcgcggcaa tcgttatgcg
    19021 cgtcgccaag gggcggcatt ttgccttcgg ccccgcactg acagtttcgg gctggataat
    19081 ttttacggca aacgattccg tatggcgggc ggtcaactgg tggctgaccc atccggtgag
    19141 atgacagcat gggtcggact gaccggcgga atcggcagcg gcaaatcggc agccgcgcaa
    19201 tattttgccg atttgggcgt gccgcgcatc gatgcggacg cggcggcgca ctcgctgacg
    19261 gcttcagacg gcatcgccct gccggaaatc aggcggctgt tcggcgacac cgttttcgac
    19321 acacagggtt tgttgcggcg cgacatattg cgtaaagaaa tctttgcctc cccatcgcgc
    19381 aaagccttgc tcgaatccgt gatgttgccg ctgattttct cagaaatcaa aaaacagcaa
    19441 gaaaccttta ccgatgcggt ttacggcatt gtcgaaattc cgctgctgac ggagaagcgt
    19501 caatttatca gcctgatacg gcgtgtcctg accataagcg cacctttgga aaaacgtatc
    19561 ggcagggtaa tggcacgcag cgggctgacg cgcggcgagg tcgcggacat catcagccat
    19621 caggcatccg aatccgaacg cctgctgctt gcagacgatg tactgctcaa tgacggcagc
    19681 ctcaaaagcc tacgtgagaa aacaatgctc ctgcacgcgt tttattcagg gattttcgcc
    19741 tcaaaaccaa cacaaggaaa acacaatggc tgaatcgcgg caaacacgcc ttcaagtcaa
    19801 atgtccgacc tgtcaaacgg cagtagtatg gaaaccggaa aacgcattcc gcccgttctg
    19861 ttcgcaacgc tgcaaactga tcgacttggg cggatgggca gacgggaaat atacggtttc
    19921 cggccaaacg gaaagtttgc cggaaatatc cgaacccgac ggggcatacc gctgaccgcc
    19981 ccgccttccc ggcaaacacc ctgaaaggtc aaatgccgtc tgaaacaaac acgcttcaga
    20041 cggcattttc attctcaaac ctaatcgttg gtatttgccg ttacctcttc caatgaagta
    20101 atgccctgca taattttcaa aataccggcc cggcgcaaat ccaccatacc ctccttatag
    20161 gcaacgtcca aaatacccac ttccgtaccg ttgttcataa tcacacgctg catttcttcg
    20221 ctgatgggca taacctcata cacgcccgca cgccccttat aaccctgccc ccggcaacgg
    20281 tcgcaaccga cggcgcggta aagtttccaa tcttttgcaa gatcctcatc ggtgaaaccg
    20341 acttccttca aagcagaggc agacgggcgt tccacttcct gtttgcagct cgaacacagc
    20401 ctgcgtaaaa gacgctgcgc cataatcagg ctgaccgaac tggcaatatt aaacggcgcg
    20461 acacccatat tcagcatacg cgacaacgtc gccggcgcat tattcgtgtg cagtgtggaa
    20521 aacaccatat gccctgtttg tgccgcctta atcgcaatat cggcagtttc caaatcacga
    20581 atctcaccga ccataatgat gtccgggtcc tgacgcagga aagacttcaa agcagcggca
    20641 aaagtcagac cctgcttatc attgacgtta acctgattga tgcccggcag gttaatctcg
    20701 gcagggtctt ccgccgttgc aatatttacc gactccgtat tcaaaatatt caaacaggta
    20761 tagagcgaca ccgtcttacc cgaacccgtc gggccggtta ccagcaccat cccgtaagga
    20821 cggtgaatcg cttccaacaa caattttttc tggaacggct caaaaccgag ctggtcgatg
    20881 ttcaaagacg cggcatcgga attcaaaatc cgcatcacga ccttttcgcc aaacagcgtc
    20941 ggcaatgtgc tgacacggaa atcgacaggc ttgccgccct tttgaaaggt cagctgcatc
    21001 ctaccgtcct gcggtatccg tttttcggaa atgtccaaac gcgacattac cttaatccgg
    21061 gaagcaagct gcccccttac cgcaatgggc ggctgaacca cctcgcggag ctgcccgtcc
    21121 acacggaaac ggatacgcgc attgtgttcg taaaactcga aatggatgtc ggatgccccg
    21181 ctacgcaagg catccgacaa agttttatgg ataaacctcg gaacagggcc gtcttctgcc
    21241 tcctcgttgt cgatatacag ggtgtggctt tcctcttcct cttgcccctc cccaagctcc
    21301 tgaagcagcg atgtcgaacg cgaacccacc caatcgagca aacccgccaa ctggtcatcc
    21361 tcgacaatga ccaactcaac cgcaatccct gcggcagaaa cggttttctg aatttgcggc
    21421 atctgggtcg gatcggaaac cgcaaaaaat actttgtcgc cccgacggaa aaccggcaca
    21481 cagtggaact ccaccatctg ctcctccgtc aacaccccca tcagcaccct gtggcgcgga
    21541 taatgacgca aatcaagaat cgaataactg aacaccctcg caatcaatgc cgcaagcgac
    21601 ttgggcgaaa tgacaccgtc tgaaaacagc atcggcaaca cttccttacc cgcctgcgac
    21661 tcattgtagt aatgctcggc ctgctcaaca gtaaccacct ggttttgaac cagaatcctc
    21721 agcaaaccta cgctcatacg accttatccc caaatttatt cattgttata cctgtacaga
    21781 ttttatcata aaacaacaga tttccaagcc tgaacatctt ttacgaagcc tgaaaatcat
    21841 ttcacgattc tgccgtccta aaggtcggtt tttcaagcag gaagaaaaag ttttcagatg
    21901 gcaaaaaagc cctccagcac tgaaaggcct tatatcggaa acttcccgca acacgggaaa
    21961 cagacaaatg caaaccgtca aacctcgcca acaggaatcg aacctgtatt ttacgcttag
    22021 gaggcatacg ttctatccgt tgaactatgg cgagccgaaa tgaaaaggga gattttaaac
    22081 ctttccggca acaaaagaca agatgtcggc cgcaatcagc ggcccgacag ggataccgcc
    22141 cataaatgcc accccgatga ccgtaccgat cagcaagccc gttaccaata ccggctgccg
    22201 tcccatcaaa ggcacgccgc atcccgccag ccaagccacg aaaataccga taaaaacggc
    22261 ggatatcatt ttaaaattca aaaattcggc aacaggagga acctgcgcct ttcctgaaac
    22321 caacggactc aaaaccccta tggtcaaaag aatgataccg aggttcaacc cgtgcttctc
    22381 gaccaacggg acaaactgta ccaatgccgt ctgctgcatc agcagcaata tggttgccga
    22441 gacggtaatc gaattgttgt tgctgaccac ccccaacaga atcagcgtaa ccagaaacag
    22501 gggaacaaaa ctgaaattca tcggttacga caccctgacc aaagattcct tcgccagctg
    22561 aatcatagca tccttcactt cgctgtcgga cagggcatcc aacgcggcaa cggcacaatc
    22621 gactgctttg cgcgcctcgc ctatcgaata tgccaaagca tccgaacgga cgacataatc
    22681 gcggattttt tcaaaatagc cgcgatctgc attttccaaa gcagtacgca catcgttcgc
    22741 aacctgttcg gaaccctgac gcatcagata aatcaaaggc agggtcggtt ttccttccgc
    22801 caaatcgtcg ccgacgtttt tacctgtttc ttcggtttcc cccgaataat ccagcacatc
    22861 gtcaataatc tggaatgccg taccgacgta cataccgtag tctttcaagg cctgttcgtg
    22921 cccgggggaa gctttgccca aaattgcgcc gacttgagcg gcagcttcaa acaattttgc
    22981 cgttttatat tggatgactc ggatatattg ttcttcggta atgtccgtat tgccgatgtt
    23041 catcagctgc atgacctctc cctcggcaat gatgttggtc gcatccgcca tcacttccaa
    23101 aacgcgcata ctgcccgagg caaccatcag ttgaaatgca cgggtatata aaaagtcgcc
    23161 aaccaacact gccgccgcat tgccgaacag attgtttgcc gttgcccgcc cacggcgcaa
    23221 atcgctttca tcgacgacat cgtcgtgcag gagtgtggaa gtgtggataa actcgaccat
    23281 cgctgccagc gaatacagtt tctcgtcatc ataaccgacc gccttacccg ccaaaatcgt
    23341 cataatcgga cgcaggcgtt tgccgcccgc gctgatgata tatgtaccga tttgcgaaat
    23401 cagtgcgaca tcggattgca ccgcacggtt gatgacttca ttgactttgg caaggtcttc
    23461 aggcagatgt cgctggaaat agggcagatt ctcgagcatg gcagactctc aggtttacgt
    23521 ttccgtcaaa cggcagatac cgcttgaaag ctgattcaaa tagcgggcaa ttatatcagc
    23581 aaagccatca gggtacatct tttcagacgg catatgattg cccgaaccgc gcaaactttg
    23641 acaaaacagg caaataacaa tacaatgccc aatttcgcac aatggtgtgc ggatattaac
    23701 cataaccctt atggagttga gtatgtacgc ggtcgtaaaa accggcggca aacagtataa
    23761 agtttccgtc ggcgaaaaat tgaaagtaga acagatacca gcccaactcg acagccaaat
    23821 cgaactgacc gaagttttga tgattgctga cggcgaatct gtaaaagttg gcgcaccctt
    23881 tatcgaaggt gcaaaagtaa cggctaaagt agtggcacac ggtcgtggcg aaaaagtccg
    23941 catcttcaaa atgcgccgcc gcaaacacta ccaaaaacgc caaggccacc gccaaaattt
    24001 cacccaaatc gaaatcgtgg caatcgccta accttaaaac ttaggagcat tacaaatggc
    24061 aagtaaaaaa gcaggcggca gcacccgcaa cggtcgcgat tcagaagcca aacgcttggg
    24121 cgttaaagcc tacggcaacg agctgattcc cgcaggttcc atcatcgtac gccaacgcgg
    24181 taccaaattc cacgcaggcg acaacgtagg tatgggcaaa gaccacactt tgttcgccaa
    24241 aattgacggt tatgtcgaat tcaaaaccaa aggcgcgctg aaccgtaaaa ctgtcagcat
    24301 ccgtccttac accggttctg aagaataatt caaccgatac ctgaagccgc atcttttcac
    24361 gatgcggctt tttacatacc ccatacccga tttgatacac attaagctga aagtaaaaat
    24421 ccgcatacac cctcccctgc atatttcttc aacaacgggt tttgatataa tcgcctatct
    24481 gttacagata gttcaaacgg cattcaaacc cttacaaatg ccgtctgaaa tcatcggcat
    24541 ccgcctatgc aaaggatatt ttatgagttt acacagcgac atcctcgtcg tcggcgcagg
    24601 cccggcgggt ttaagttttg cagccgaact tgccggcagc ggtttgaaag ttactctgat
    24661 cgaacgcagc ccactgactg ttctgcaaaa tcctccctat gacggacgcg aaatcgccct
    24721 gacccatttt tcccgcgaaa tcatgcagcg tttgggtatg tgggacaaaa ttcccgaaaa
    24781 cgaaatctac cccttgcgcg atgccaaagt gctgaacgga cgttccgact accagctcca
    24841 ctttccccaa ccgactgaag cgcgcggcga gcctgccgac tgtttgggct atctgatttc
    24901 caaccacaat atccgccgcg ccgcctatga aatcgtatca caactcgaca atgtcagcat
    24961 tctgaccgat acggccgtta aagaagtcaa aacatctgat aatgaagcgc aagtcttttt
    25021 ggaaaatgga gacattctaa ccgcgcgtct ccttttggca gcagacagcc gtttctcaca
    25081 aacccgccga caactcggta tttcttcaga tatgcacgac tacagccgaa ccatgttcgt
    25141 ctgccgcatg aaacataccc tttccaacca acataccgct tacgaatgct tccattacgg
    25201 acgcaccatc gcactgctgc cactggaaaa gcgcctgacc aataccgtca ttacagtcga
    25261 taccgataaa atcaacagcg ttcaaaacct ttcgcccgaa gaattggcgg caagcgtaaa
    25321 agaacagctc aagggcaggc tcggcgacat ggaactggtc agcagcatcc accattaccc
    25381 ccttgtcggc atgattgcca aacgtttcta cggcaaacgc agcgcgctga tcggcgatgc
    25441 ggctgtcggt atgcaccccg taacggcaca cggcttcaac ctcgggcttt ccagcgcgga
    25501 tattctggca aaactgatac tcgaagccga acagcgcggt caagacatcg gcgcggcttc
    25561 cttgttggaa aaatacagca gcaaacatat gctgcacgcc catccgcttt atcacggcac
    25621 caatatgatg ctgaaactgt ttaccaacga aaccgcgccg gcaaaactgt tgcgcggttt
    25681 ggtattacga gccggcaaca acttcccgcc gctgaaaaag ctgattacca aacaactgac
    25741 cggttgaaaa ctgccgaaat gccgtctgaa acgtttcaga cggcattttt gtattatgaa
    25801 ccgttttgcg gtttccatat ccttggcaga cggtttgcag cagattcgca tacggcagat
    25861 gtttcaagca gaaaggaaac acaataaaaa taaaaaagcc tccgaacagt cggaggcttt
    25921 gctttcaaac tgaaattatt tcagtttggt ttctttgtac actacgtgtt tgcgggcaac
    25981 cggatcgaat tttttgattt ccagtttgcc gggcatagtg cgtttatttt tggtagtggt
    26041 gtagaagtgg ccagtacctg caccggattc cagtttgatt ttatcgcgca ttgcagtaat
    26101 ccttaattaa atagtgttta aattaagctt cgccgcgagc acgcaaatca gccaatacga
    26161 catcaatgcc tactttgtcg atggtacgca atgcagcgtt ggaaacgcgc aggcgaaccc
    26221 agcggttttc actttctacc caaaaacgac gtgattgcaa gttgggcaaa aaacggcgtt
    26281 tggttttgtt gttggcgtgc gatacgttgt tgccggacat cgggcgttta ccggtcactt
    26341 tgcaaactcg tgccataatc agtctccaaa cttctaaaat agtaaaacgc gatttatacc
    26401 acgaaaaaca atgccgtttc aagtgtttta aagaaaaaca gatgttttgc gcgggtaagc
    26461 cgcccgagtg ccgcatctgc ggaacgtttg caggtgcgaa acagatgggg cgcgattata
    26521 gcggatttcg ggagcttctg cattcaaaat gccgtccgaa catatttcca gtattttcag
    26581 acggcatttc aagttttcaa atccctcaat gtccaccgcc gccgctgtgg aacggcggtt
    26641 tcgccagcca gacaatggga atcaggacga taaacaaaat gctgccggcg aggaatattt
    26701 cgttcgatcc gatgatgaag ccctgttgcg taatggtatt gttgatgatg cctagagttt
    26761 gaccgtcgga aatgccttgt tgggacaaat gcgccgccgt ttcgtgcaat gttgcggaat
    26821 agggcgtgat gtgttcggca aaacgcgtgt ggtgcaacgc ttcgcgccgt tcccacaggg
    26881 tgctgacgac ggatacgccg acaccgccca tcagcacgcg caggaaattc gacaggctgc
    26941 cggcggcggc aatctgtccg cccttcatgt gcgacagtgt gatggtggtc agcggcagga
    27001 agaacatggc aacgcctacc ccctgccaaa actgcggcca gatgacgttg ccgatatcca
    27061 tgtcggcata aaaatcagtg cgccaataaa aagtgaaggc aaaggtcagg aagctggcgg
    27121 ttacgagcag gcgcatatcg attttattgc cgaacctgcc gattaacgga gataggaaga
    27181 cggggaggat gccgacgggc gcggcagcaa gccctgccca cgcggaggta tagcccaagt
    27241 tggtctgcaa cactaacggc agcagggtca gcgtccccat atacaccatg aaacccaacg
    27301 aggtggcaat tacgccgacg gtaaaattcc gatctttaaa cagcgataaa tcgacaatcg
    27361 gatatttttc tcccaattcc caaacaataa aatacgacaa gcacaccagt gcgactacgc
    27421 ccaaggtaat gatttctcca gaggcgaacc agtcaagttc cttacccctg tccagcatca
    27481 tctgtaacgc gccgataccg accatcatca gcgtcagccc gacatagtcg gtcggcgttc
    27541 tgacggttgc cgtttcgcgg tgtttcaaat gtttccatgt aatccatgcc gatatgatcc
    27601 cgatggggat attaatgaag aaaatccaac cccaatgcca gtttccggaa atccaaccgc
    27661 cgagtatcgg cccgaggaca ggggcgacaa cgacggtcat tgcccacaat gccagtgcca
    27721 gcatccgttt tgcgggcgga taggatgcca ttaacaggct ttgcgacagg ggaatcaacg
    27781 gcccggcgat aaagccctgc aaaatgcgga aaacaaccag cgactgaagg ttgggcgcga
    27841 tgccgcacag ccacgatgcg atgacgaaac cggcggcggc ggcggtaaac aatttgacct
    27901 cgccgatacg ttttgccaaa aagcccgtca gcggcacgga aacggcgttt gccacggaaa
    27961 aagaagtgat gacccacgtc ccctgcgtgg ttgccgcacc gaggttgccg gcaatgacgg
    28021 ggacggcgac gttggcgatg gtcgtatcta aaacctccat aaatacggca agccccaaag
    28081 acagcgtaac ccacgccaat gccgcaccct taagcggtgg ataatccatt gtgtcctccg
    28141 tttcagacgg catcagggcg cggattgccc gaggatttca tcgaccgtcc gatcgacttc
    28201 cgaccagtcg gtactttcca tttccggcaa tgccgcaccc ggcgtttttg aaacaggcgc
    28261 gcctgcggcg gaagtatcca ctttaaccgt catcgacaaa ccgatacgca acggatacct
    28321 gtccacatct tcgcggttca gcacgatacg gacggggacg cgctgcacca ctttaatcca
    28381 gttgcccgtt gcgttttgcg ccggaatcag cgaaaacgcg ctgcccgtac ctgccgaaaa
    28441 ccctgccacc ctgccgcgat aaacaatttg tttgccgtac aaatcggaca ccagctcggc
    28501 aggctgtccg attttcatat gccgcaactg cgtctcttta aaattggcat ccacccacac
    28561 atccgacagc ggcaccaccg ccatcagcgg cgcgcctgcc gccacctgct gcccgacctg
    28621 caccgaacgc ttcgccacct gaccgtccgc cggcgcgcgg acttgcgtcc gccgaaggtt
    28681 cagccacgca tctttcaacc tgccgattgc cgtctgaacc tccggctgtt cgcgcaaaga
    28741 aacatctccg cccaaagccg cgcgtgccga agattcttcc gccaaagccg ccttaaccgc
    28801 cgcctgcgcc tgagacactg ccgtacgggc gtgtgccagc tcttcggcgg acaccgcacc
    28861 cgattccgcc aaagcggacc ggcggcgcaa atcatcctgc gcgcgcgcca aatccgcacg
    28921 gcgcaaggca acctgcgccc ccgcctgcga agtggcggca ttttgccggc ggttttggcg
    28981 caccgcctga accaactcgt tttttgcccg ctcgtaagcc agcacatcat tatcgtcatc
    29041 caacaccgcc agcacgtcgc cttttttcac ggcatccgta tcgtcgtgca aaaccttccg
    29101 caccgtgccg cccttttgcg gcgtaacctg aaccacgcgt ccggcaacat aagcgtcttc
    29161 cgtttcctct tcgtgctgcc accataaaaa aaacgccgat ccggcggctg cggcggaaag
    29221 cgcgaacagc agcgtcaatg ccgtcaggcg gcgtttgcgt ttgacttgcg tgttttgaag
    29281 ttttgtttcg tctgtgtgcg cttccataag attgggttcc gaatttcctg atttcatata
    29341 aacaatattc tttcaatagg aaatagattt tatatccgcg caataacgca atcaagtcag
    29401 tattttagat gcaatattca aaaaacaacg cttcaggcgg caaaactgaa aatatatttc
    29461 gtttatatat gacatggcaa acaccgccgc ccgcaccatg ccgtctgaag aaaactacac
    29521 aaataccgcc gcttatatta caatcgccgc cccgtggttc gaaaacctcc cacactaaaa
    29581 aactaaggaa accctatgtc ccgcaacaac gaagagctgc aaggcatctc tcttttgggt
    29641 aatcaaaaaa cccaatatcc gaccggctac gcgcctgaaa ttctcgaagc attcgacaac
    29701 aaacatcccg acaacgacta tttcgtcaaa ttcgtctgcc ccgaattcac cagcctctgc
    29761 ccgatgaccg ggcagcccga cttcgccacc atcgtcatcc gctatatccc gcacatcaaa
    29821 atggtggaaa gcaaatccct gaaactctac ctcttcagct tccgcaacca cggcgatttt
    29881 catgaagact gcgtcaacat catcatgaaa gacctcatcg ccctgatgga tccgaaatac
    29941 atcgaagtgt tcggcgagtt cacaccgcgc ggcggcatcg ccattcatcc tttcgccaat
    30001 tacggcaaag caggcaccga gtttgaagca ttggcgcgta aacgcctgtt tgagcacgac
    30061 gcacaataaa ccatccttcc catatttcag acggcattcc ttcgatacgg tatgccgtct
    30121 gaacgccttt ccgaaaggtt tttttatgta cgcatttacc gacgcacagc aacagaaggc
    30181 actcttctgg ctggtgcttt ttcatatcct catcatcgcc gccagcaact atctggtgca
    30241 gttccccttc caaattttcg gcatccacac cacttggggc gcattttcct ttcccttcat
    30301 cttccttgcc accgacctga ccgtccgcat tttcggttcg cacttggcac ggcggattat
    30361 cttttgggtg atgttccccg cccttttgct ttcctacatc ttttccgttt tgttccacaa
    30421 cggcagttgg acaggcttgg gcgcgctgtc cgaattcaac acctttgtcg gacgcatcgc
    30481 cttagccagc tttgccgcct atgcgctcgg acaaatcctt gatatttttg tattcaacaa
    30541 attacgccgt ctgaaagcgt ggtggattgc cccaaccgca tcaaccgtca tcggcaacgc
    30601 cttggatacg ttggtatttt tcgccgttgc cttctatgca agcagcgatg aatttatggc
    30661 ggcaaactgg cagggcatcg cttttgtcga ttacctgttc aaactcaccg tctgcggtct
    30721 gtttttcctg cccgcctacg gcgtgattct gaatctgctg acgaaaaaac tgacgaccct
    30781 gcaaaccaaa caggcgcaag accgccccgc gccctcgctg caaaatccgt aaaacagctc
    30841 tgtagggaat cgggacggtt gggttttctt ttatttgcaa acactgccgg aacggataaa
    30901 tccggattcc cacccacttc gtcattcccg cgaaagcggg aatccggtgc gttggggttc
    30961 agtcatttcc gataaactcc tgccgcattg tatttctaga ttcccgcttt cgcgggaatg
    31021 acggcggatg ggtttccgtg ccgtggtgtc cggattcccg ccggtacggg aatgacggca
    31081 gcgcttcctt ggcttagttt tattttaagc cactataaat gccgtctgaa aacctgtttg
    31141 cagattttca gacggcattg ttttcgtcgc cggttcaaac ttcaatccga ttgcgacacg
    31201 gtaaccggta tgccgcgcaa gcgcgcaagc agcgcgtccg ccttctgttt ctgcgcggca
    31261 aacgccgcct tgtccgcctg cgtcaattcg ggtgtcggca atgcgaccga aacaggattg
    31321 acgggctgcc cgttgatgcg cgcctcgtaa tgcaggtgcg gcccggtcga acgccctgtc
    31381 gaaccgacaa aaccgatgac ctcgccgccg cgcacattgc cttgtgcctg cgaaaacgcg
    31441 ctcaagtgcg cgtacagcgt ttccacaccg ttggcgtggc gtatcatcac cgcgttgccg
    31501 tatccgccct tccggccttt aaaggtaatc acgccgtcgg cggaagccct gaccggcgtt
    31561 ccctgcggtg cggcataatc gatgcccgtg tgcagccgcc atgtgtgcag gatggggtgc
    31621 atacggtagc cgaacggcga agaaatgcgc gtatagacca gcggctcgat gttgaagccg
    31681 cctttttcct gcaacaccct gccgtcttca tcgtaataat tgccgccccc tccgccttcc
    31741 ttgtccgaac ggtaatagaa cgcctgatgg gttgtgccgc ccttgacaac ttccgccgcc
    31801 aaaatatcgc ccgccgccac ctgctgcccg tggaaataca ggctgtcgta aagcaggcgc
    31861 acggcatcgc cttccttcaa accgtcaagg ctgaagcggc cggcaaaaat cccgcttaag
    31921 gattcgcgga tttcgacggg cacttccgcc cgcgccagcg aaccgcgcgc cgacgttttg
    31981 accacgaccg aacgcagcgt cggcaaaacc ttcatatccg catcagaagc cgaccgccgc
    32041 catatgccgc cttttttttc caaagcgacc agattgcgct cgccgtcttc gtcggtaaaa
    32101 aactgcactt cgcgcgcact gccgtcgccg ccgaccaaaa catgaaccga ctggtcggca
    32161 cgcaaatgcc gcaaatcggc ttcgccgcca tatttttccg tgattcgggc aatctcgtcc
    32221 cgcgccatac ccgaacgcgc cagcacgtcc gccagcgagt cgcccggctg caccgcctcc
    32281 tgcacccaat atgccgtctg aacgccgctg ccgccccaag acagcggcgg cagtttttgt
    32341 tccacgcgct gcggtctgac gcgctccgtc ccctctgtcg aagcaatgta tgccgccgac
    32401 accagaataa tcgaaacggc aagcgcgcgc agcgcgtatt tccgatgttt tgccgaaagt
    32461 gggaagacag ccatattgtt cctttttgac ggcgtttgcg ccgaatcctc tataatatcc
    32521 gcccgatcct catttgtcag gcatcaaacg atgaaactca ccctcgccct cccctcgctc
    32581 aatttggatg aagacgaaat ccgaatacct ctatgcctgc ccgccttcaa caaaatcctg
    32641 caatacggct cgccgcaccg ccaaagctgc acggcttcgg cattttacgc acgttatttg
    32701 tggtgcggaa gactggcaca acgcccggcg caaagcctga atatgccgtc tgaaaccgtc
    32761 gcgctcgcca cgcccgtctg gcaaaaaatg gggctgcatc aggcaaatgt gctgacggcg
    32821 gaatatttgg atgtcggtac ggatgaagcg gaacggctct gccgcgatct gtcggcgttt
    32881 tacggcgaca ttccgtggcg tttcgttccc gtcctgcccg aattatggct ggtttccctt
    32941 ccccgcgcgt accgctgggg cgcgaagccc gttttggact tgggcggact gttgggcgcg
    33001 gacgatcagc cggacgggga agacgcgttg gaatggctgc gcgtccaaac cgaaatccaa
    33061 atgtggctga acgctcaccc cgtcaaccac aaccgcaaaa aacgcgggct gcccgaattg
    33121 aacggcttat ggctttggga cagtctgcac ggaagcgcac aaggcggcac gcttttcgcc
    33181 gatacggttt ggagccgttt tcacccgaac cgccgagcat tgcccgacag cttccgagct
    33241 tatgcggaaa cggcggcaca cctgcccgat acgcaccaca tcctgtttat ggacgatttg
    33301 cgcctgaccg ccctgacagg ggacagggag cggtatgcgg caatattgca gcagtgggga
    33361 gaacgctggt tcgcaccgct ttacgaagcc gtccgcaccg gcaaaatcaa acggctggac
    33421 atcgccacgg acggacaaca cggcggtacg ctgaccttca aacccacaga caggcggaag
    33481 ttttggcgct gcacgaaaac ctttgacgga atctggtaaa cccgcccgcc gcaaccgcga
    33541 caatgccgtc tgaagcccga atcgggtttc agacggcatt ttaccccgca tcgccgttat
    33601 gccggaaaaa ccggaatacg tttccgcaca cgcggcggca cgcaaaacac cgcccgaaag
    33661 ccgccgatgc ccgccgtgac accgccgccg gcagggtttc cgccgaaaag gaacagcaat
    33721 cagaacgttt tgttaaactc gacaaacgcc ctgtttttct cgtattcgtt aaacacatcg
    33781 ttgctccacg tttcgcggtg cgacagcgtc aggcgcggcg tgatgccttt gaaatgcaat
    33841 gcccggtgcc aaaggctcaa ggatgtgtcc gattctttat ccctgcgcct ttccccttta
    33901 aaactgctga agaagccggg tttttcataa tgccgtttcg ccacgccgag gcggaacagc
    33961 gaagacaggc cgctgccgcc ccattcctgc ccccaggcaa agcgcaggcc gtaacggttg
    34021 aaattgtcgc cacggtcggc ggggttgcgc tcgcggtaaa aatccaaacc gcccgtccaa
    34081 tattggcgcg cattccggta aaacaccagc gaattggaaa tttgcaaatg ggtattgtcg
    34141 gaacgcgccc ggcgcgtatt cttcaaacgc ccccactccg ccgaagacag cgtttgccat
    34201 ctcggggttt gccaacggtt gaaataaagg cgtgcgccgt tggcgtaaga ataagcgtcg
    34261 ttgccgtagg tgcggcgttc gtggaacact gccagcccga catctttacg ccggtcggca
    34321 aaaccgatgc cgccggaaac acctgccgtc atatcgttga atttcttatt ccccggataa
    34381 accctgccgg acacgtcgcc gcccgccgtc gtgtaccagc cgtttttcag cgaccatttt
    34441 ttctccgcgc cgaaccggta attgaccgcc gtgccgtcca cctgtttcgg gaaagtccaa
    34501 ttgccgtact gctgctgttt cggggcttgg ttgatattgt gttcgcgggt aacgctgaga
    34561 ccgccgttta ccttccacgc atcgcgttcg cgcaatgcct tgcggtacag ctcgacctgc
    34621 tccataagct gcggcggcag atcttctgtt ttcaggcggt cgaactggtc tgccgccgcc
    34681 tcgttctgcc tgtcttcaaa caatgccgcc gccaaacgca tacggacggc gggcgcgtcg
    34741 ggttgggcgg caatcaattc ccggtaatgg gaaaccgcct ccttcaccct gccctctgcc
    34801 tgcgccaaaa tcccttgtgc ataaagtgcc aacatcttat cctgccgcgc ctgttgtagg
    34861 taaatcggca aaatcacgcg gataccggca atattgtttg agaccactgc ggaatacatg
    34921 gcacgcgaca acaattcggg atttttcagc agggtttcgc cgtcaacctg caaaactttt
    34981 cctttttccc gcacctgccc cggtaccttc tccctgtcga tcggtttgac ctccgcttca
    35041 tgaagcctga actcgggacg gcttctcaaa tccggttcgc gcggtgtttc ttcggcgtat
    35101 gccgcgcttg ccaataaagg cagcagcatc catctgtttc gtgcaggcat aaatgtcttc
    35161 ccacaaaaat aaaaataaaa aataaccatt atcaaccggc ggattgtatc agttttttat
    35221 gccgctgttc caaaccctgc cgcccgatgc cgcgacaatg ccgtctgaag ccagaatcgg
    35281 gtttcagacg gcggcaaaaa accggcggtt ttccgccggt ttcatcatta tgccccgccc
    35341 ttcggggcgg cagggttcgg atcggtttgc ggggcggcgc acggggccgt gcaggtgtgc
    35401 cgcctgtgtg tcaaaacatt tcccggcgca tcaaaacaac catttgaccg acaatgcggc
    35461 ttctttgtcg ccgtccgtcc ttttgccgta tccgatgcgt gcggacatat ggcctttcca
    35521 accggcttca atgccaaacc gcccttcgag cgccgtcctg cctgccagcg tctgtttttc
    35581 gccgtccatt tccatgccga aagattttga cctgtgcaaa acattaaaag cggcaaaagg
    35641 ctgaagattg acaccgttac gcaaagcaaa acgggttttt gcccgaatgc cggcgcggat
    35701 ttgccactga ccgctgccga gcagcccgac cgccgcccct cgctgtcggt aaagccgccg
    35761 tttacgccca agtaggtaaa ctgcgcctgc ggttgcaggt aaaactgcat attactgcct
    35821 tatatattgc gtccctaaga aggggcgatt aacaaaaatt aacgcccctt cttagggacg
    35881 caatatataa ggagtgagta cctgttcttc tattaaaaaa ttaatctttt gaggcatttt
    35941 ctgttgaagt ttattaaaca catcttcaga aattccaaac tgctttatta tctcttccct
    36001 aacccgtttt ttattttctt cccaagcctc gggtcttgtt ttgtataaat cctgtaattg
    36061 ctttttaact gcctgcttta aatcagttcg gtaattatct gtaatattga tttcgtcata
    36121 caaggcttca gatgattttt gatcggtttt accgctggag aaataatgga aaacaccgtt
    36181 tgccggcttg tctgaaaatg aaaaatcggc agtatcgcca acatttgtag gacgagtatc
    36241 cgaaccgggc tgataactga aagcaccgaa gcaatcaaaa gacacactgc acgggccgcg
    36301 ccaaacgtgg gaatttctgt cttccgccgc ttctaaaata aatttgtttt taatctcggc
    36361 ttctttgacg ggatcgtacg catccgaacc ccaagcatat ggcgtgcaaa acagcgataa
    36421 aacagataat gttaatagat taacccgacc gcttgcttgc tttcagtgtc atgagaaatt
    36481 ttcctttgtc aagtgttaaa gttataatga ttatatacta tatcacacta catcgcaatg
    36541 aaaaatcggg aaaaacaaaa aacccctccg ccgtcattcc cgcaaaagcg ggaatctaga
    36601 attttaatgc ggcaagaatt tatcggggat ggccggggtt taaaggtctg ggttcccgcc
    36661 tgcgcgggaa tgacggttta gaaatcaccc gaaacgagaa aaagaaccga aaccggacaa
    36721 gtcggattcc cgcgcaggcg ggaatgacga taagcgtaat ttcaatccgc catattgtct
    36781 tttcacttgc ctgaaaacag atttcagccg cctatccctg catccggcgg ctgatgtagt
    36841 cggcaatcaa atcccgcttt tcccaaaaaa acttctgcat tttttgttcg gaatacagtt
    36901 tgcggaccag agtgggcaga ccgctgtgga cgatggcggc gatttctttg ttgccttctt
    36961 cttcctgcat tgccgtctga aaatccaaac ccctgccttt cagatatgct gcaaggcggt
    37021 tgcggatgtg tgaattgagt tcgatggatt tgagcatttt gcctccgttt tgcggtaagg
    37081 atttattcga tttgtttatc cgcctgattt tatcacgttt cccaagcggt ttgcctgtac
    37141 aataccgctt ttcggaaggg tgtgggcgat gatgttttct tggttcaagc tgtttcactt
    37201 gttttttgtc atttcgtggt ttgcagggct gttttacctg ccgaggattt tcgtcaatat
    37261 ggcgatgatt gatgcgccgc gcggcaatcc cgagtatgtg cgcctgtcgg ggatggcggt
    37321 gcggttgtac cgttttatgt cgcctttggg tttcggcgcg gtcgtgctcg gcgcggcgat
    37381 accgtttgcc gccggccggt ggggcagcgg ctgggttcac gtcaaactgt gtttgggctt
    37441 gatgctcttg gcttatcagt tgtattgcgg cgtgctgctg cgccgttttc aggattacag
    37501 caatgctttt tcacaccgct ggtaccgcgt gttcaacgaa atccccgtgc tgctgatggt
    37561 tgccgcgctg tatctggtcg tgttcaaacc gttttgacgg agcatcttat gccgatagaa
    37621 atcgaacgcc gttttttgat tgaaaacgac aaatggcggc aatacgccga tgagccgctg
    37681 ctgctgaaac agggctacct gtctgttgaa aaagaacgca ccatccgcat ccgcattgcc
    37741 ggaaaacggg cgtggctgac gctgaaaggc tatatttcgg aaatcagccg cagcgagttc
    37801 gaatacgaaa tcccgcttgc cgatgcggaa aagatgatgg aaacgatgtg cccgtttaag
    37861 atggaaaaac ggcgttatcc ggtcagatgg ggcggcagcc tgtttgaagt cgatgttttc
    37921 cttggcgaaa actcgccttt ggtcgtcgcg gaaatcgagt tgcccgccga aaatgccgat
    37981 tttgaccgtc cggactggct ggggcgcgaa atcacttcag acggtatgtt taccaatgcc
    38041 tatttgagca aacatccgtt ctcaagctgg aaaaatgccg tctgaagcgg cttcagacgg
    38101 catctgcctt gcggttatcc cttgaggtaa tgcacgaatg tatatgcaac gcctttgctg
    38161 ctgacacggc gttccgtccg ctctgcttct ttccaatgcg tccggtctat ttctgggaaa
    38221 aatgcatctc cttccacaga caaatccact tcggttatcc gcaaatcggt cgctaatggc
    38281 atcgcttgtc cgtatatctg cgcgccgccc ataatgacgg cttcttccgc gccggcgcac
    38341 aatgccaatg ccacctccaa acttgccacc gtttccgcgc ctgccgcgca ataatccgcc
    38401 tgccggctga tgacgatgtt cctccgtccg ggcaggggtt tgacgggcag ggattcccac
    38461 gttttccgcc ccataatgac gggtttgccc aaggtatagg ctttgaaaaa tgcgaaatct
    38521 tcggggatgt gccaaggcat agcattgccc gccccgatgc acaggttttc cgcacacgcc
    38581 gcaattatgg ttattttgag catattttct ccacaaaaat gccgtctgaa cgcttcagac
    38641 ggcattttat gacattctgc gtcaaaaatc tcaacctgcg cgcgccatac gttttgtgtt
    38701 cgcacccgcc aacaatgcca acaattcttc agtcgcgccc caaccgatac acgcatcggt
    38761 aatgctcttg ccgtacactt ccggcttgtc ctgcctgcct tcgaccaaat ggctttccac
    38821 catcacgccc atgatattgc cgccgtcctg ttccaattgg tcggcaatgt cttgtgccac
    38881 ttccatctgc cgggtgtaat ccttgcggct gttggcgtgg ctgcaatcga tcatcagctt
    38941 gtcggttacc cctgccgcac gcagttgttc caccgcctcg ctgacgtgtc ccgcatcata
    39001 attcggctct tttccgccgc gcaaaatgac atgacagtcg ggattgccgc cggtatggac
    39061 aatggcggaa tgcccggcct tggttacaga caagaaatga tgcgaatggc tcgccgcacc
    39121 gattgcgtcg atcgcaatct tcaaattgcc gtccgtaccg tttttaaagc cgacggggca
    39181 ggacagaccg cttgccaatt cgcggtggac ttggctttcg gtcgtccgcg cgccgattgc
    39241 cccccaagaa atcaggtcgg cataatactg gggtgtaatc atatccaaaa attcggtaga
    39301 ggcaggcatg cccatattat tcagggacaa caacagactg cgcgcctgac gcaaaccgaa
    39361 attgatgtcg aacgtaccgt ccaaatgcgg gtcgttaatc aaacctttcc aacccaccgt
    39421 cgttctcggc ttctcgaaat aaacgcgcat cacgatcaaa agctcgtttt cataccgctt
    39481 gcggagtttc aacagacgtt ccgcatattc caacgccgct ttcggatcgt gaatcgaaca
    39541 cggcccgata atgaccaaca gccgcctgtc cctgccgtga accaaatcgg aaatttcctg
    39601 acgggtgcgg tgaaccaagc ccgaagcctc tttggaaatc ggcagctcgt aaagatgggc
    39661 aatcggcggc aacaactctt taacttcttt aatcttaata tcgtctgtgg ggtaatggtg
    39721 tgtcatcttg catctttcct gatgggtttt tatacgctgc ttaggttaca tcgtttacct
    39781 tgcacaaaca agtgcaacat a
//
LOCUS       DAXFZM010000010        37903 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.010, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000010 DAXFZM010000000
VERSION     DAXFZM010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 37903)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 37903)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..37903
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.010"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            34..1590
                     /gene="dnaA"
                     /locus_tag="ACFJAG_000413"
     CDS             34..1590
                     /gene="dnaA"
                     /locus_tag="ACFJAG_000413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA];
                     GO_process: GO:0006275 - regulation of DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HFC3979802.1"
                     /translation="MTLAEFWPLCLRRLHDMLPHGQFAQWIAPLTVGEEGGVWVVYGK
                     NQFACNMLKSQFAGKIEAVREELAAGRPAFVFKPGEGVRYEMAAVEGAVEPAEPSLHA
                     GSEEMPVQEVLLDELPSEKPVKPAASKTAADILAERMKNLPHEPRQAAGPASRPESAA
                     VAKARTDAQRDAEEARYEQTNLSPDYTFDTLVEGKGNRLAAAAAQAIAENPGQSYNPF
                     FLYGSTGLGKTHLVQAVGNELLKNRPDAKVRYMHSDDYIRSFMKAVRNNTYDVFKQQY
                     KQYDLLIIDDIQFIKGKDRTMEEFFYLYNHFHNEKKQLILTCDVLPAKIEGMDDRLKS
                     RFSWGLTLELEPPELEMRIAILQKKAEAAGISIEDEAALFIANLIRSNVRELEGAFNR
                     VGASSRFMNRPVIDIDLARTALQDIIAEKHKVITADIIIDAVAKYYRIKISDVLGKKR
                     TRNIARPRQVAMSLTKELTTLSLPSIGDSFGGRDHTTVMHGIRAVAKLREEDPELAQD
                     YEKLLILIQN"
     gene            1670..2773
                     /gene="dnaN"
                     /locus_tag="ACFJAG_000414"
     CDS             1670..2773
                     /gene="dnaN"
                     /locus_tag="ACFJAG_000414"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HFC3979803.1"
                     /translation="MLILQAERDSLLKPLQAVTGIVERRHTLPILSNVLIEGRGGQTK
                     LLATDLEIQIDTAGPEGGAGDFRITTNAKKFQDILRALPAGALVSLDWDDNRLTLKAG
                     KSRFALQTLPAADFPMMNVGEDISATFSLGQERFKTMLSQVQYSMAVQDIRYYLNGLL
                     MQVEGSQLRLVATDGHRLAYAACAIDADLPRAEVILPRKTVLELFKLLNNPDDPIQIE
                     LLDKQVRFQCNGTTIVSKVIDGKFPDFNRVIPLDNDKIFVLSRAELLGALERVSILAN
                     EKFRGARLFLQPGLLSVVCSNNEQEEAREEIEIAYQGGELEVGFNIGYLMDVLRNIHS
                     DDMQLAFGDANRSTLFTVPNNPNFKYIVMPMRI"
     gene            complement(2922..4979)
                     /gene="ppk1"
                     /locus_tag="ACFJAG_000415"
     CDS             complement(2922..4979)
                     /gene="ppk1"
                     /locus_tag="ACFJAG_000415"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009358 - polyphosphate kinase complex
                     [Evidence IEA];
                     GO_function: GO:0008976 - polyphosphate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006799 - polyphosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 1"
                     /protein_id="HFC3979804.1"
                     /translation="MTEQNRILCRELSLLAFNRRVLAQAEDKNVPLLERLRFLCIVSS
                     NLDEFFEVRMAWLKRENKLHPRRRPDNGKTPSETIADVTEAARSLIRHQYDLFNNVLQ
                     PELARESIHFYRRRNWTGTQKKWIEDYFDRELLPILTPIGLDPSHPFPRPLNKSLNFA
                     VELDGTDAFGRPSGMAIVQAPRILPRVVPLPSELCGGGHGFVFLSSILHAHVGKLFPG
                     MNVKGCHQFRLTRDSDLTVDEEDVQNLRAAIQNELHDREYGDGVRLEVADTCPAYIRD
                     FLLAQFRLTDAELYQVKGPVNLVRLNAVPDLVNRPDLKFPPHTPGRLKALGKNSPIFD
                     LVRQSPILLHHPYQSFDPVVDMIREAAADPAVLAVKMTIYRTGTRSELVPALMKAALA
                     GKQVTVVVELMARFDEANNVNWAKQLEEAGAHVVYGVFGYKVHAKMALVIRREDGVLK
                     RYAHLGTGNYHQGTSRIYTDFGLITADEQITADVNTLFMEITGLGKPGRLNKLYQSPF
                     TLHKMVIGRIARETEHAKAGKPARITAKMNSLIEPTVIEALYRASAAGVQIDLIVRGM
                     CTLRPGVKGLSENIRVRSIVGRQLEHARVYCFHNNGADDTFISSADWMGRNFFRRIET
                     ATPITAPELKKRVIREGLEMALADNTHAWLMQPDGGYIRAAPAEGESEADLQNDLWDL
                     LRG"
     gene            complement(5148..5591)
                     /locus_tag="ACFJAG_000416"
     CDS             complement(5148..5591)
                     /locus_tag="ACFJAG_000416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein L,D-transpeptidase"
                     /protein_id="HFC3979805.1"
                     /translation="MPPRLLSGILCCLLTTAPVFAQGQPDAVSAYIQKKKVIVDTSKA
                     ELCFADDRQCHPVLIGTATPKGTFGLTLNSTDKPGYGGEVIGFKQEGDFLFALHRVWN
                     QIPSERRNERIASPSVSDRIMTNGCINVSDAVYEKLRHYFVLEVI"
     gene            complement(5598..6114)
                     /locus_tag="ACFJAG_000417"
                     /pseudo
     CDS             complement(5598..6114)
                     /locus_tag="ACFJAG_000417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243014.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
     gene            6381..9011
                     /gene="leuS"
                     /locus_tag="ACFJAG_000418"
     CDS             6381..9011
                     /gene="leuS"
                     /locus_tag="ACFJAG_000418"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004823 - leucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006429 - leucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HFC3979806.1"
                     /translation="MQEHYQPAAIEPAAQKKWDDARISNVSEDASKPKYYCLSMFPYP
                     SGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAMKNNVAPAAWTY
                     DNIEYMKTQLKSLGFAVDWEREVATCKPEYYRWEQWLFTKLFEKGIVYRKNGTVNWDP
                     VDQTVLANEQVIDGRGWRSGALIEKREIPMYYFKITDYAEELLNDLDKLEHWPEQVKT
                     MQRNWIGKSRGMTVRFAVSDDSKQGLEGDYAKFLQVYTTRPDTLMGATYVAVAAEHPL
                     ATAAAADKPELQAFIAECKAGSVAEADMATMEKKGVPTGRYVVNPLNGDKLEVWIANY
                     VLWGYGDGAVMAVPAHDERDFEFAAKYNLPKKQVIAVGDNAFDANRWQEWYGDKENGV
                     LVNSGDLDGLDFQTAFDAVAAKLQSQGAGEPKTQYRLRDWGISRQRYWGCPIPIVHCE
                     KCGDVPVPADQLPVVLPENVVPDGMGSPLAKMPEFYETSCPCCGGAAKRETDTMDTFM
                     ESSWYFFRYMSPKFSDGMVSAESAKYWGAVDQYIGGIEHAILHLLYARFFTKLMRDEG
                     LVNVDEPFERLLTQGMVVCETYYRENDKGGKDWINPADVELTFDDKGRPVSAVLKADG
                     LPVVISGTEKMSKSKNNGVDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEGAH
                     RFLRRLWRTVYEYLKQGGAVKAFAGNQDGLSKELKDLRHKLHSTTAKVSDDYGRRQQF
                     NTAIAAVMELLNQYDKTDTGSEQGRAVAQEVLEAAVRLLWPIVPHICETLWSELNGAK
                     LWEAGWPTVDEAALVKSEIEVMVQVNGKLRGKITVAADASKADLEAAALANEGAVKFM
                     EGKPAKKIIVVPGRLVNIVV"
     gene            9240..10031
                     /locus_tag="ACFJAG_000419"
     CDS             9240..10031
                     /locus_tag="ACFJAG_000419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003761076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DpnI domain-containing protein"
                     /protein_id="HFC3979807.1"
                     /translation="MNLFFDTQLGKQQNKATHKIRVMSEAWLEKNGYCPCCGSKPMQR
                     FANNKPVADLFCPNCHEQYELKSKNQKTIGNSVPDGAYRTMLERIRSDTNPNFFFLAY
                     KKADYSIRQLVLVPKHFITPDMIIPRNKGIKNRPHHIMCSINLAPLPESGKIFLIDDS
                     RIIEPETVLKKWQSNLFLRNQNAERKDWLLAVMKCIDQLTEEFTLSQMYEFENKLSIQ
                     FPQNNHIKDKIRQQLQILRDQNMIEFIGRGLYKKIDKLHPTPKAF"
     gene            9998..10168
                     /locus_tag="ACFJAG_000420"
                     /pseudo
     CDS             9998..10168
                     /locus_tag="ACFJAG_000420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258361.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease"
     gene            10161..10970
                     /locus_tag="ACFJAG_000421"
                     /pseudo
     CDS             10161..10970
                     /locus_tag="ACFJAG_000421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751586.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
     gene            10967..11522
                     /locus_tag="ACFJAG_000422"
                     /pseudo
     CDS             10967..11522
                     /locus_tag="ACFJAG_000422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235198.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(11972..12184)
                     /locus_tag="ACFJAG_000423"
     CDS             complement(11972..12184)
                     /locus_tag="ACFJAG_000423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979808.1"
                     /translation="MPDRIKPSRNGGGADGIARQQGTAQTGAKPETSPTARHGDFLRP
                     LQGGIGFKRHGLEGKTGGAQNCLNAV"
     gene            complement(12294..12605)
                     /locus_tag="ACFJAG_000424"
     CDS             complement(12294..12605)
                     /locus_tag="ACFJAG_000424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HFC3979809.1"
                     /translation="MKYKSGIFAAIHETMQGLHDIGAIDKKTMRGFDKSCLTEIKPLS
                     GGDIKAIREKEALSQAAFAIYLNVGKNHVSAWERGVKKPSGAALKLLTIVKNKGIEAI
                     A"
     gene            complement(12602..12969)
                     /locus_tag="ACFJAG_000425"
                     /pseudo
     CDS             complement(12602..12969)
                     /locus_tag="ACFJAG_000425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272218.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
     gene            complement(13355..13476)
                     /locus_tag="ACFJAG_000426"
                     /pseudo
     CDS             complement(13355..13476)
                     /locus_tag="ACFJAG_000426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(13859..13944)
                     /locus_tag="ACFJAG_000427"
     tRNA            complement(13859..13944)
                     /locus_tag="ACFJAG_000427"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(13908..13910),aa:Leu,seq:gag)
     gene            complement(13958..14308)
                     /gene="secG"
                     /locus_tag="ACFJAG_000428"
     CDS             complement(13958..14308)
                     /gene="secG"
                     /locus_tag="ACFJAG_000428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015136 - sialic acid transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015739 - sialic acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HFC3979810.1"
                     /translation="MEAFKTLIWIINIISALAVIVLVLLQHGKGADAGATFGSGSGSA
                     QGVFGSAGNANFLSRSTAVAATFFFATCMAMVYIHTHTTKHGLDFSNIRQTQQAPKPV
                     SNTEPSAPVPQQQK"
     gene            complement(14315..15088)
                     /gene="tpiA"
                     /locus_tag="ACFJAG_000429"
     CDS             complement(14315..15088)
                     /gene="tpiA"
                     /locus_tag="ACFJAG_000429"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004807 - triose-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HFC3979811.1"
                     /translation="MYRQIGMWDQKWVIGNWKMNGRLQNNNALMHRFRILPTAERVLI
                     GLAAPTVYLLQLHNAMQIVLNNRILTCAQDVSRFPDNGAYTGEVSAEMLADTGTDIVL
                     IGHSERSLYFGEKNEIQRRKMENVLNVGLIPLLCVGESLEERETGKEHEVIAHQLSIL
                     QGLDTKNIAVAYEPVWAIGTGKVATVEQIADMHAFIYKEILSLCGSDVKIRVLYGGSV
                     KADNAADIFAVPYVDGALVGGASLSYDSFTAIISAAQNA"
     gene            15271..15774
                     /locus_tag="ACFJAG_000430"
     CDS             15271..15774
                     /locus_tag="ACFJAG_000430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0033745 - L-methionine-(R)-S-oxide
                     reductase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HFC3979812.1"
                     /translation="MHALHFSASDKAALYREVLPQIESVVADEADWVANLANTAAVLK
                     EAFGWLWVGFYFVDTRSDELVLAPFQGPLACTRIPFGRGVCGQAWAKGETVVVKDVNA
                     HPDHIACSSLSRSEIVVPLFSDGRCIGVLDADSEHLAQFDEADALYLGELAKILERRF
                     EASSQAA"
     gene            15877..16533
                     /locus_tag="ACFJAG_000431"
     CDS             15877..16533
                     /locus_tag="ACFJAG_000431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate O-methyltransferase"
                     /protein_id="HFC3979813.1"
                     /translation="MDFEKARFNMVEQQIRPWDVLDFDVLDALEEIPRELFVDESLQG
                     LAYADMELPLANGHKMLEPKIVARLAQGLKLTKNDTVLEIGTGSGYATALLAKLAGRV
                     VSDDIDAERQKRAKAVLDGLSLENIDYVQNNGLTELSAGAPFDAVYVGGAVTLVPEVL
                     KEQLKDGGRMAVIVGRRPVQRALLITRRGDVFEEKVLFDTLVAHLDDKDAHPFDSFNF
                     "
     gene            16614..16937
                     /locus_tag="ACFJAG_000432"
     CDS             16614..16937
                     /locus_tag="ACFJAG_000432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HFC3979814.1"
                     /translation="MDIVQLPSAALKAWMDEGRMFCLLDVRTDEEAAVCSLPNALHIP
                     MNLIPLRQNELPDDVPLVVYCHHGIRSLHTAMYLAEAGFENLYNLQGGIDAWAVEVDA
                     EMARY"
     gene            complement(17200..19377)
                     /gene="tdfF"
                     /locus_tag="ACFJAG_000433"
     CDS             complement(17200..19377)
                     /gene="tdfF"
                     /locus_tag="ACFJAG_000433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010950972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent iron piracy receptor TdfF"
                     /protein_id="HFC3979815.1"
                     /translation="MTRFKYSLLFAALLPVYAQADVSVSDDPKPQESTELPTITVTAD
                     RTASSNDGYTVSGTHTPFGLPMTLREIPQSVSVITSQQMRDQNIKTLDRALLQATGTS
                     RQIYGSDRAGYNYLFARGSRIANYQINGIPVADALADTGNANTAAYERVEVVRGVAGL
                     PDGTGEPSATVNLVRKHPTRKPLFEVRAEAGNRKHFGLGADVSGSLNAEGTLRGRLVS
                     TFGRGDSWRQLERSRDAELYGILEYDIAPQTRVHAGMDYQQAKETADAPLSYAVYDSQ
                     GYATAFGPKDNPATNWSNSRNRALNLFAGIEHRFNQDWKLKAEYDYTRSRFRQPYGVA
                     GVLSIDHSTAATDLIPGYWHADPRTHSASMSLTGKYRLFGREHDLIAGINGYKYASNK
                     YGERSIIPNAIPNAYEFSRTGAYPQPSSFAQTIPQYDTRRQIGGYLATRFRAADNLSL
                     ILGGRYSRYRAGSYNSRTQGMTYVSANRFTPYTGIVFDLTGNLSLYGSYSSLFVPQLQ
                     KDEHGSYLKPVTGNNLEADIKGEWLEGRLNASAAVYRARKNNLATAAGRDQSGNTYYR
                     AANQAKTHGWEIEVGGRITPEWQIQAGYSQSKPRDQDGSRLNPDSVPERSFKLFTAYH
                     LAPEAPSGRTIGAGVRRQGETHTDPAALRIPNPAAKARAVANSRQKAYAVADIMARYR
                     FNPRTELSLNVDNLFNKHYRTQPDRHSYGALRTVNAAFTYRFK"
     gene            complement(19640..19963)
                     /locus_tag="ACFJAG_000434"
     CDS             complement(19640..19963)
                     /locus_tag="ACFJAG_000434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003768951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HFC3979816.1"
                     /translation="MQNETINLKQHLAAIKEYWQPEIINRHGFQFRLVKLLGDYGWHT
                     HGYSDKVLFAVEGDMAVDFADGGNMTIREGEMAVVPKSVSHRPRSENGCSVVLIDLPD
                     PSEAA"
     gene            complement(19996..20967)
                     /locus_tag="ACFJAG_000435"
     CDS             complement(19996..20967)
                     /locus_tag="ACFJAG_000435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore ABC transporter substrate-binding
                     protein"
                     /protein_id="HFC3979817.1"
                     /translation="MKPRFYWAACAVLPAACSPEPAAEKTVSAASQAASTPVATLTVP
                     TARGDAVVPKNPERVAVYDWAALDTLTEPGVNVGATTAPVRVDYLQPAFDKAATVGTL
                     FEPDCESLHRHNPQFVITGGPGAEAYEQLAKNATTIDLTVDNGNIRTSGEKQMETLSR
                     IFGKEARVAELNAQIDALFAQKREAAKGKGRGLVLSVTGNKVSAFGTQSRLASWIHGD
                     IGLPPVDESLRNEGHGQPVSFEYIKEKNPGWIFIIDRTAAIGQEGPAAVEVLDNALVC
                     GTNAWKRKQIIVMPAANYIVAGGARQLIQAAEQLKAAFEKAEPVAAQ"
     gene            21203..22159
                     /locus_tag="ACFJAG_000436"
     CDS             21203..22159
                     /locus_tag="ACFJAG_000436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HFC3979818.1"
                     /translation="MNTAAIYRQYQTYVRSDKSGWALDGCSDSALIAQAKQPGLHLKM
                     CINRFDSGITLSRMRGGGTGAFPTEIHNFSHNCALFVMVSGQNRLQMGGREYRPSAGE
                     IWLVRGELADVSETLLPDSGGMCALHLDFSLEKLRRWHDEGLLDERLFSPQTIGRFAL
                     QRLAQNAGTLTAAACPLLQRPFESDGFGLLADEADALELSARLLRFTFRRHDNGYRRR
                     RIDEAADILNSEFARPLTIAEIARRVGLNECYLKRYFKAQTGETVAGRLRRLRLEHAL
                     ALIKSGSTIQAAMHFCGYRHAGRFNEAFRRHYGFLPSDVKKC"
     gene            complement(22272..24287)
                     /locus_tag="ACFJAG_000437"
     CDS             complement(22272..24287)
                     /locus_tag="ACFJAG_000437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family protein"
                     /protein_id="HFC3979819.1"
                     /translation="MKSYPDPYRHFENLDSAETQNFAAEANAETRARFLENDKARALS
                     DGILNQMQDTRQIPFCQEHRARMYHFHQNAEYPKGVYRMCTAATYRSGYPEWKILFSV
                     ADFDELLGDDVYLGGVSHLVEQPNRALLTLNKSGGDTAYTLEVDLEAGELVEGGFHFP
                     AGKNHVSWRDENSVWVCPAWDERQLTESGYPREVWLVERGKSFEESLPAYQIDKGAMM
                     VNAWRYLDPQGSPIDLIEASDGFYTKTYLQVSSEGGAKPLNLPNDCDVVGYLAGHLLL
                     TLRKDWHRANQSYPSGALVAVKLNRGELGAAQLLFAPDETQALESVETTKRFVVASLL
                     ENVQGRLKAWRFADSKWQEAELPHLPSGALEMTDQPWGGDVVYLAASDFTTPLTLFAL
                     DLNVMELTVMRLQPQQFVSDGIEVRQFWAVSSDGERIPYFHVGKNAAPDTPTLVYAYG
                     GFGIPELPHYLGSVGKYWLEEGNAFVLANIRGGGEFGPRWHQAAQGISKHKSVDDLLA
                     VVRDLSERGMSSPKHIGLQGGSNGGLITAAAFVREPQSIGALVCEVPLTDMIRYPLLS
                     AGSSWTDEYGNPQKYEACKRRLGELSPYHNLSDGIDYPPALITTSLSDDRVHPAHALK
                     FYAKLRETSPQSWLYSPDGGGHTGNGTQRESADKLACVLLFLKEFLG"
     gene            complement(24383..25693)
                     /gene="argA"
                     /locus_tag="ACFJAG_000438"
     CDS             complement(24383..25693)
                     /gene="argA"
                     /locus_tag="ACFJAG_000438"
                     /EC_number="2.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004042 - acetyl-CoA:L-glutamate
                     N-acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino-acid N-acetyltransferase"
                     /protein_id="HFC3979820.1"
                     /translation="MNAPDSFVAHFREAAPYIRQMRGTTLVAGIDGRLLEGGTLNKLA
                     ADIGLLSQLGIRLVLIHGAYHFLDRLAAAQGRTPHYCRGLRVTDETSLGQAQQFAGTV
                     RSRFEAALCGSVSGFARAPSVPLVSGNFLTARPIGVIDGTDMEYAGVIRKTDTAALRF
                     QLDAGNIVWMPPLGHSYGGKTFNLDMVQAAASVAVSLQAEKLVYLTLSDGISRPDGTL
                     AETLSAQEAQSLAEHAASETRRLISSAVAALEGGVHRVQILNGAADGSLLQELFTRNG
                     IGTSIAKEAFVSIRQAHSGDIPHIAALIRPLEEQGILLHRSREYLENHISEFSILEHD
                     GNLYGCAALKTFAEADCGEIACLAVSPQAQDGGYGERLLAHIIDKARGIGISRLFALS
                     TNTGEWFAERGFQTASEDELPETRRKDYRSNGRNPHILVRRLHR"
     gene            complement(25690..26118)
                     /locus_tag="ACFJAG_000439"
     CDS             complement(25690..26118)
                     /locus_tag="ACFJAG_000439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MJ0042-type zinc finger domain-containing
                     protein"
                     /protein_id="HFC3979821.1"
                     /translation="MPACFCPHCKTRLWVKETQLNVAQGFVVCQKCEGLLKAKDHLAS
                     TKEPIFNDLPEAVSDVKLVHRIGTHAISKKQISRDEIADILNGGTTLHDTPPATAAAA
                     PAAAPQVSVPPARQEGLNWTIATLFALIVLIMQLSYLFIL"
     gene            complement(26192..26833)
                     /gene="pyrE"
                     /locus_tag="ACFJAG_000440"
     CDS             complement(26192..26833)
                     /gene="pyrE"
                     /locus_tag="ACFJAG_000440"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004588 - orotate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HFC3979822.1"
                     /translation="MTDFRQDFLKFSLAQNVLKFGEFTTKAGRRSPYFFNTGLFNDGL
                     STLQLAKFYAQSIIESGIRFDMLFGPAYKGIILAAATAMMLAEKGVNVPFAYNRKEAK
                     DRGEGGVLVGAPLKGRVLIIDDVISAGTSVRESIKLIEAEGATPAGVAIALDRMEKGT
                     GELSAVQEVEKQYGLPVAPIASLNDLFILLQNNPEFGQFLEPVRTYRRQYGVE"
     gene            complement(26895..27632)
                     /locus_tag="ACFJAG_000441"
     CDS             complement(26895..27632)
                     /locus_tag="ACFJAG_000441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010791194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HFC3979823.1"
                     /translation="MLSARYLHLHEALGLGPMWLKQAAAVLPPKNTPATPAQARPQTV
                     RAATIRPSQPHNVQARLETMKALETAAVHTRKPAPETETPPPGLSDGIAPVPAASGIT
                     KLAVVSLCPPIEDAVYGQLFHGKAGILLDNILKAAGLDAAYVHKTCWVKTAAVGNPMP
                     SEQAVADALGQIAGELDGCRAPAVLFLGQAFVNLERQAMIETLCGSRPFFIIDHPARL
                     LRQPELKARNWQVLKQLKRALRQGGGS"
     gene            complement(27626..28066)
                     /gene="rimI"
                     /locus_tag="ACFJAG_000442"
     CDS             complement(27626..28066)
                     /gene="rimI"
                     /locus_tag="ACFJAG_000442"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008999 -
                     peptide-alanine-alpha-N-acetyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HFC3979824.1"
                     /translation="MNIRPALPSDCAALAALDTVCNPSAWTQRQFESALVSPSEQVFL
                     AEKDGRIAAFIVWQNLPDESELHLIATAPECRRRGVASALLEYWYAHLPEGTQRLLLE
                     VRAGNAAAQALYTKHGFSIAGRRKNYYCAADGQTEDAVLMEKIC"
     gene            complement(28063..28740)
                     /gene="tsaB"
                     /locus_tag="ACFJAG_000443"
     CDS             complement(28063..28740)
                     /gene="tsaB"
                     /locus_tag="ACFJAG_000443"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0002949 - tRNA threonylcarbamoyladenosine
                     modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HFC3979825.1"
                     /translation="MQADFNRPVLAVDTGTSYLSLALRADGEIRLFHQEVGIRQSELI
                     LPEIRTLFRNAGITAADLGAIVYAKGPGAFTGLRIGIGVAQGLATPFDTPLIGIPTLD
                     AAASLPPPQSCILAAADARMGEVFYAWFDTLNRRRLSDYQVGRAADIALPEGYVFSDG
                     IGSAFALENRPPFSGKPDMPTAADFLALALGGGYPATGAAHAELLYVRNKIALTAKEQ
                     AERKART"
     gene            complement(28879..29736)
                     /locus_tag="ACFJAG_000444"
     CDS             complement(28879..29736)
                     /locus_tag="ACFJAG_000444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="factor H-binding protein"
                     /protein_id="HFC3979826.1"
                     /translation="MTRSKPVNRTTFCCLSLTAGPDSDRLQQRRGGGGGVAADIGTGL
                     ADALTAPLDHKDKGLKSLTLEASIPQNGTLTLSAQGAEKTFKAGGKDNSLNTGKLKND
                     KISRFDFVQKIEVDGQTITLASGEFQIYKQDHSAVVALRIEKINNPDKIDSLINQRSF
                     LVSDLGGEHTAFNQLPDGKAEYHGKAFSSDDAGGKLTYTIDFAAKQGHGKIEHLKTPE
                     QNVELASAELKADEKSHAVILGDTRYGGEEKGTYRLALFGGRAQEIAGSATVKIGEKV
                     HEIGIADKQ"
     gene            complement(29875..30939)
                     /gene="fba"
                     /locus_tag="ACFJAG_000445"
     CDS             complement(29875..30939)
                     /gene="fba"
                     /locus_tag="ACFJAG_000445"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219833.1"
                     /note="catalyzes the reversible aldol condensation of
                     dihydroxyacetonephosphate and glyceraldehyde 3-phosphate
                     in the Calvin cycle, glycolysis, and/or gluconeogenesis;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0004332 - fructose-bisphosphate aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphate aldolase"
                     /protein_id="HFC3979827.1"
                     /translation="MALVSMRQLLDHAAENSYGLPAFNVNNLEQMRAIMEAADQVNAP
                     VIVQASAGARKYAGAPFLRHLILAAVEEFPHIPVVMHQDHGASPDVCQRSIQLGFSSV
                     MMDGSLLEDGKTPSSYEYNVNATRTVVNFSHACGVSVEGEIGVLGNLETGEAGEEDGV
                     GAAGKLSHDQMLTSVEDAVRFVKDTGVDALAIAVGTSHGAYKFTRPPTGDVLRIDRIK
                     EIHQALPNTHIVMHGSSSVPQEWLKVINEYGGNIGETYGVPVEEIVEGIKHGVRKVNI
                     DTDLRLASTGAVRRYLAENPSDFDPRKYLGKTIEAMKQICLDRYLAFGCEGQAGKIKP
                     VSLEKMASRYAKGELNQIVK"
     gene            31133..32050
                     /gene="xerC"
                     /locus_tag="ACFJAG_000446"
     CDS             31133..32050
                     /gene="xerC"
                     /locus_tag="ACFJAG_000446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HFC3979828.1"
                     /translation="MVLDGFAAYFDAYLENIVREGKSEHTVAAYRRDLEELFALLAQM
                     PSEDAGGVPQDLSRRDFTAALRRLSQRGLDGRTLARKLSAWRQYCAWLVKRGLMRADP
                     TADIKPPKQPERVPKALPQEWLNRMLDLPVDGGDPLAVRDHALFELMYGSGLRVSEIH
                     GLNADDVYLDEAWVHVTGKGRKQRQVPLTGKSVEALKNYLPLRQTASDGKALFTGRNG
                     TRLSQRQIQKRLESWAAQYGDGRHVSPHMMRHSYAGHLLQASRDIRAVQELLGHSSLS
                     TTQIYTKLDFDHIARLYDEAHPRAKRQDE"
     gene            32135..34048
                     /gene="dxs"
                     /locus_tag="ACFJAG_000447"
     CDS             32135..34048
                     /gene="dxs"
                     /locus_tag="ACFJAG_000447"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008661 - 1-deoxy-D-xylulose-5-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009240 - isopentenyl diphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HFC3979829.1"
                     /translation="MNPSPLLDLIDSPQDLRRLDKKQLPRLAGELRAFLLESVGQTGG
                     HFASNLGAVELTIALHYVYDTPEDKLVWDVGHQSYPHKILTGRKNQMHTMRQYGGLAG
                     FPKRCESEYDAFGVGHSSTSIGAALGMAAADKLLGGDRRSVAIIGDGAMTAGQAFEAL
                     NCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDMHGLLSTVKAQTGKVLDKI
                     PGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPVDGHNVENLVDVLKDLR
                     SRKGPQLLHVITKKGNGYKLAENDPVKYHAVANLPKEGGAQMPSEKEPKPAAKPTYTQ
                     VFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVGIAEQHAVTFAGGLA
                     CEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGADGPTHAGLYDLSF
                     LRCVPNMIVAAPSDENECRLLLSTCYQADAPAAVRYPRGTGTGAPVSDGMETVEIGKG
                     IIRREGEKTAFIAFGSMVATALAVAEKLNATVADMRFVKPIDEELIVRLARSHDRIVT
                     LEENAEQGGAGGAVLEVLAKHGICKPVLLLGVADTVTEHGDPKKLLDDLGLSAEAVER
                     RVREWLPDRDAAN"
     gene            complement(34113..34277)
                     /locus_tag="ACFJAG_000448"
     CDS             complement(34113..34277)
                     /locus_tag="ACFJAG_000448"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979830.1"
                     /translation="MPPEAFQTAFCLVSADGTAAVIRTSGINFQTRNGTPSTARKPPP
                     EPFLPPAGFQ"
     gene            complement(34295..35623)
                     /gene="miaB"
                     /locus_tag="ACFJAG_000449"
     CDS             complement(34295..35623)
                     /gene="miaB"
                     /locus_tag="ACFJAG_000449"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016782 - transferase activity,
                     transferring sulphur-containing groups [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HFC3979831.1"
                     /translation="MKKVFIRTFGCQMNEYDSEKMLSVLAEEHGGIEQVTQADEADII
                     LFNTCSVREKAQEKVFSDLGRVRPLKEKNPGLIIGVAGCVASQEGENIIKRAPYVDVV
                     FGPQTLHRLPKMIVDKETSGLSQVDISFPEIEKFDHLPPARVEGGAAFVSIMEGCSKY
                     CSFCVVPYTRGEEFSRPLNDVLAEIANLAQQGVKEINLLGQNVNAYRGEMDDGEICDF
                     ATLLRIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSHLHLPIQSGSDRVLSA
                     MKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDIAFDLSF
                     VFIYSPRPGTPAANLPDDTPHEEKVRRLEALNEVIEAETARINQTMIGTVQRCLVEGI
                     SKKDPDQLQARTANNRVVNFTGTPDMINQMIDLEITEAYTFSLRGKIVEA"
     gene            35826..35906
                     /locus_tag="ACFJAG_000450"
                     /pseudo
     CDS             35826..35906
                     /locus_tag="ACFJAG_000450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712609.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-fructose-6-phosphate
                     aminotransferase"
     gene            35960..36343
                     /locus_tag="ACFJAG_000451"
     CDS             35960..36343
                     /locus_tag="ACFJAG_000451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010950978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-fructose-6-phosphate
                     aminotransferase"
                     /protein_id="HFC3979832.1"
                     /translation="MYCLRLRRLVLIFVNPLYQTEEGIAQTVVKGKTTRAEVEARFGK
                     RNPFGCYAYHEVSLPIYNFLPTNFIYMKSERRHWEWCADYDGEGVVRDYRFTHKEEKD
                     ERSVIRDTVGVIRKEAGKSLSQPEK"
     gene            36407..37687
                     /gene="hemL"
                     /locus_tag="ACFJAG_000452"
     CDS             36407..37687
                     /gene="hemL"
                     /locus_tag="ACFJAG_000452"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042286 - glutamate-1-semialdehyde
                     2,1-aminomutase activity [Evidence IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HFC3979833.1"
                     /translation="MNRNEILFDRAKAIIPGGVNSPVRAFGSVGGVPRFIKKAEGAYV
                     WDENGTRYTDYVGSWGPAIVGHAHPEVVEAVREAALGGLSFGAPTEGEIAIAEQIAEI
                     MPSVERLRLVSSGTEATMTAIRLARGFTGRDKIIKFEGCYHGHSDSLLVKAGSGLLTF
                     GNPSSAGVPADFTKHTLVLEYNNIAQLEEAFAQSGDEIACVIVEPFVGNMNLVRPTEA
                     FVKALRGLTEKHGAVLIYDEVMTGFRVALGGAQSLHGITPDLTTMGKVIGGGMPLAAF
                     GGRKDIMECISPLGGVYQAGTLSGNPIAVAAGLKTLEIIQREGFYENLTALTQRLANG
                     IAAAKAHGIEFAADSVGGMFGLYFAAHVPRNYADMARSNIDAFKRFFHGMLDRGIAFG
                     PSAYEAGFVSAAHTPELIDETVAVAVEVFKAMAA"
BASE COUNT         7955 a         9858 c        11220 g         8870 t
ORIGIN      
        1 ttcgatttca tttttaccga ttcgagccta tccatgacat tagcagagtt ttggccgctg
       61 tgcctccgcc gtcttcacga tatgttgcct cacgggcagt ttgcgcaatg gattgcgccc
      121 cttacggttg gtgaggaggg tggcgtatgg gtggtgtacg gcaagaacca gtttgcctgc
      181 aatatgctca agagccagtt tgccggaaaa atagaagcgg tgagggaaga gttggctgcc
      241 ggccgtcccg ccttcgtatt caaaccggga gaaggcgtgc gttatgagat ggcggcggtt
      301 gaaggtgctg tcgaacctgc cgagccgtcc ttgcacgcgg ggtcggagga gatgcccgtg
      361 caggaggttc tgttggacga gctgccgtct gaaaagcctg tcaaacccgc tgcgtcgaaa
      421 acggcggcgg atattttggc ggaacgtatg aaaaacctgc cgcacgagcc gcgtcaggct
      481 gccgggcctg cttcccggcc ggaatcggcg gcagttgcca aagcgcggac ggatgcgcag
      541 cgtgatgcgg aagaagcgcg ttacgaacaa accaacctgt ctccggatta cacgtttgat
      601 acgttggtag aaggtaaggg caaccgcctt gcggcggctg cggcgcaggc gattgcggaa
      661 aacccggggc agagttacaa cccgttcttc ctgtacggca gcacgggttt gggcaaaacc
      721 caccttgtgc aggcggtcgg caacgagctg ttgaaaaacc gtcccgatgc caaagtgcgc
      781 tatatgcatt cggacgacta catccgcagc tttatgaagg cggttcgcaa caatacctac
      841 gacgtgttca agcagcaata caagcaatac gacctgctga ttatcgacga tattcagttc
      901 atcaaaggaa aagaccgtac gatggaagaa tttttctatc tgtacaacca ttttcacaat
      961 gagaaaaaac agctcatcct cacttgcgat gttttacccg ccaaaatcga aggtatggac
     1021 gaccgcctca aatcccgctt ttcgtggggg ctgactttgg aactcgagcc gcccgaattg
     1081 gaaatgcgta tcgccatttt gcagaaaaag gcggaagcgg cgggcatcag tatcgaagac
     1141 gaagccgcgc tgttcattgc caatctgatc cgttccaacg tgcgcgaact ggaaggcgcg
     1201 ttcaaccgtg tcggagcgag cagccgcttt atgaaccgtc ccgtcatcga catcgatttg
     1261 gcgcgtaccg ctttgcagga cattattgcc gagaagcaca aagtcatcac cgccgacatc
     1321 atcatcgatg cggtggcgaa atattaccgc atcaaaatca gcgacgtact cggcaaaaaa
     1381 cgcacgcgca acattgcccg tccgcgtcag gttgccatga gcctgaccaa agaattgacc
     1441 actttgagcc tgccgtctat cggcgattcg ttcggcggac gcgaccatac gaccgtcatg
     1501 cacggcatca gggcggtggc gaaactgcgc gaggaagacc ccgagttggc gcaggattac
     1561 gagaaactgc tgattctgat tcaaaactga ccggacacgc ctttcagacg gcatgacatt
     1621 gaccatgccg tccgaagggt aggaaatcca accgatttaa ggagcgaaaa tgttgatttt
     1681 acaagccgag cgcgacagcc tgctcaagcc gctgcaagcc gttaccggca tcgtcgaacg
     1741 ccgacacacc ctgcccatcc tgtccaatgt gctgattgag ggcaggggcg gtcagaccaa
     1801 actcttggca accgatttgg aaatccaaat cgacaccgcg ggtcccgagg gaggtgcggg
     1861 cgacttccgc atcactacca atgccaagaa atttcaggac attttgcgcg cgctgcctgc
     1921 cggtgcgctg gtgtcgctgg attgggacga caaccgtctg acgctgaagg cgggcaaatc
     1981 gcgttttgcc ctgcaaaccc tgcctgccgc cgattttccg atgatgaatg tcggcgagga
     2041 catcagcgcg actttctcgc tggggcagga gcgtttcaaa accatgctgt cgcaagtgca
     2101 gtacagcatg gcggtgcagg acatccgcta ttatctcaac ggtctgctga tgcaggttga
     2161 gggcagccag ttgcgccttg tggcgaccga cggacaccgc cttgcctatg cagcctgcgc
     2221 gattgatgcg gatttgccgc gcgccgaagt gattttgccg cgcaaaacgg tgctggaact
     2281 gttcaaactg ttgaacaacc ccgacgatcc gattcaaatc gagctgctgg acaagcaggt
     2341 gcgtttccaa tgcaacggca cgaccatcgt cagcaaggtc atcgacggca aattccccga
     2401 tttcaaccgc gtgattcctt tggacaacga caagattttc gtgttgtccc gtgccgaact
     2461 tttgggcgcg ctggaacgtg tgtccattct tgccaacgaa aaattccgtg gcgcgcgcct
     2521 gttcctgcaa cccggcctgt tgagcgtcgt gtgcagcaac aacgagcagg aagaagcgcg
     2581 cgaagaaatc gaaatcgcct atcagggcgg cgaactcgaa gtcggtttca atatcggcta
     2641 tttgatggac gtgttgcgca acatccattc cgacgatatg cagcttgcct tcggcgacgc
     2701 caaccgctcg acgctgttta ccgtgccgaa caatccgaat ttcaaatata ttgtgatgcc
     2761 gatgcggatt tgacggtttt ccggaacacg atgcccgtat tggagatatg ccccgaaccg
     2821 tgcagacgga ttcggggttt tgttcggctg ccggaaaggc aatgccgtct ggaatgcggc
     2881 ggattggggt tgggagcgta tgggggaagt gcttgtgcgg gtcagcctcg gagcaaatcc
     2941 cataaatcgt tttgcaggtc ggcttcgctt tcgccttcgg cgggcgcggc gcggatatag
     3001 ccgccgtcgg gctgcatcag ccacgcgtgg gtattgtctg ccagtgccat ttccaaacct
     3061 tcgcggatga cgcgtttttt gagttcgggc gcggtaatcg gggtggcggt ttcgatgcgg
     3121 cggaagaaat tgcgccccat ccaatccgcg ctggaaataa aggtgtcgtc cgcgccgttg
     3181 ttgtggaaac aatatacgcg cgcgtgttcg agctgcctgc cgacgatgga gcggacgcgg
     3241 atgttttcgg acaagccttt tacacccggg cgcaaggtac acataccgcg cacaatcaaa
     3301 tcgatttgca cgcctgccgc gcttgcccga tacagggctt ctatgacagt cggttcgatg
     3361 agcgaattca tcttggcggt aatccgcgcc ggtttgccgg cttttgcgtg ttcggtttcg
     3421 cgagcgatgc ggccgataac cattttgtgc agggtaaacg gactttggta gagtttgttc
     3481 agccgcccgg gtttgcccaa gcctgtgatt tccataaata atgtgttcac gtcggcggtg
     3541 atttgttcgt cggcggtaat gaggccgaag tcggtgtaga tgcgcgatgt gccttggtgg
     3601 tagttgcccg tgccgaggtg ggcgtaacgc ttgagcacgc cgtcttcgcg gcggatgacc
     3661 agtgccattt tggcgtggac tttgtagccg aacacgccgt acacgacgtg cgctcccgcc
     3721 tcttcgagct gcttcgccca gttgacgttg ttggcttcgt caaaacgcgc catcagttcg
     3781 acgacgacgg ttacttgttt gccggcgagt gccgccttca tcagggcggg gacgagttcg
     3841 gagcgcgtgc cggtgcggta aatcgtcatt ttgacggcaa gaacggcggg atcggcggcg
     3901 gcttcgcgta tcatatcgac cacgggatcg aaagattggt aggggtggtg cagcaggatg
     3961 ggcgattggc gcaccaaatc gaagatcggg ctgtttttgc ccaaggcttt cagacggccc
     4021 ggcgtgtgcg gcggaaattt caaatcgggg cggttgacta ggtcggggac ggcgttgagg
     4081 cggacgaggt tgaccgggcc tttgacctga tagagttcgg cgtcggtcag cctgaattgc
     4141 gcgagcagaa agtcgcggat gtaggcggga caggtgtcgg cgacttcgag ccgcacgccg
     4201 tcgccgtatt cgcggtcgtg cagttcgttt tgaatggcgg cgcggaggtt ttgtacgtct
     4261 tcttcgtcaa cggtcaagtc gctgtcgcgc gtgaggcgga actggtggca gcctttgacg
     4321 ttcatgcccg ggaagagttt gccgacgtgg gcgtggagga tggacgacag gaagacgaag
     4381 ccgtgtccgc cgccacacag ttcggacggc aggggaacaa cgcgcggcag gatgcgcggt
     4441 gcttggacaa tcgccatacc cgaaggcctg ccgaacgcgt ccgtgccgtc gagttctacg
     4501 gcgaagttga gcgatttgtt cagcgggcgc gggaaagggt gggaagggtc gagtccgatg
     4561 ggggtcagga tcggcagcag ttcgcggtcg aaatagtctt cgatccattt tttctgcgtg
     4621 cccgtccaat tgcggcggcg gtaaaaatgg atgctttccc gcgccaactc gggctgaagg
     4681 acgttgttga acaggtcgta ctggtgccgt atcagggagc gcgccgcttc ggtaacgtcg
     4741 gcgatggttt cagacggcgt tttgccgttg tccggcctgc gccgggggtg cagcttgttt
     4801 tcacgcttga gccacgccat gcggacttca aaaaactcgt caagattgga cgacacgatg
     4861 cacaggaagc gcaggcgttc caaaaggggg acgtttttgt cttccgcctg tgccaacacg
     4921 cggcggttga atgccagcag gctcagttcg cggcagagga tgcggttttg ttcggtcata
     4981 aggttctccc aaagatggtt gttgttcggt cggagcgggc ggacaatgcc gtctgaaggc
     5041 ttggcggcat ctgcgccggt ttcaggcggc atgacgtgac ggacggtctg tttcaggcat
     5101 cggggcaatg tgaaaacgga taccggtacg tgcggtatcc gtctgtttca aatcacttcc
     5161 aacacaaaat aatgacgcag tttttcgtac accgcatcgc tgacgttgat gcagccgttg
     5221 gtcataatcc tgtcggacac ggacggggag gcgatgcgtt cgtttcgcct ttcggacggt
     5281 atctgattcc aaacgcggtg cagggcgaaa agaaaatcgc cctcctgctt gaaaccgatg
     5341 acttcgccgc cgtaaccggg cttgtcggta ctgttcagcg tcagtccgaa cgtccccttg
     5401 ggtgtggcag tgccgatgag gacggggtgg cactgacggt cgtcggcaaa acagagttcc
     5461 gccttggatg tgtcgacgat gacttttttc ttttgaatat aggcactgac cgcatccggc
     5521 tgcccctgtg cgaatacggg ggcagtcgtc agcaggcagc acaatatccc tgaaagcagg
     5581 cggggcggca tagcggctta ttggcggata cgtttcggtt ttgccggcac gatttcgcgg
     5641 atgatgactt gcggctcggc tttgggtgcg ggcggcgggc agacggcatc tttcgggaag
     5701 acggggttcc agtagaagct gcgggcaaat ttgtctttat cgaaaatcac tttgtattgg
     5761 caggtagtaa cgccttccac gccggaagtg ttttcagggt cgatacccac gcccggggtg
     5821 tggaagtgga acaggtaatc ccattcgcgc acgccgtaca taccttcgtc gtaatgcggg
     5881 cggcccggga ttttgtagat gtcgtctttg gtcagaccgg ggcgcatctg atccagttcg
     5941 tcataagtcg ggaatgtgcc gcgcttgttg tcgagcgtta cggaataggg ttccgggaaa
     6001 accggattgt cggtcgtgcc gtcggctttg acgttgcttt atggttgcgc aggcagacag
     6061 aatgcctgcc gccaatactg ccaagctcgg tttgacgatt tgtttgattt tcatatgcag
     6121 aatccttttt tacccgatgc ccgtctgcct tttgttcgga agagccgcat caggagagtt
     6181 ttaaacgttt gattttggtt cgtaatatta gcataaaaaa cgtgcgtatc agtaaacgcg
     6241 gtgtatttgt acggcatacg gaatgatgcg cgtgcgaatt tacgcatcct gccggcaatt
     6301 tgccgattcg ccgacatcgg caacctgtta taattcctcc tttaaattcc taacgttttc
     6361 aagcgaaaaa cagaatgacc atgcaagaac attaccagcc cgccgccatc gagcctgcgg
     6421 cgcagaaaaa atgggacgac gcccgtattt ccaacgtctc cgaagacgct tccaaaccca
     6481 aatattattg cctttcgatg ttcccttacc ctagcggcaa gctgcatatg gggcatgtac
     6541 gcaactacac catcggcgac gtattgagcc gcttcaaact tttaaacggc ttcaacgtta
     6601 tgcagcctat gggttgggac gcgttcggca tgccggcgga aaatgcggcg atgaaaaaca
     6661 acgtcgcccc cgccgcttgg acctacgaca acatcgaata catgaaaacc cagctcaaaa
     6721 gcctgggttt tgcggttgac tgggaacgcg aagtcgccac ctgcaaaccc gaatactacc
     6781 gctgggaaca atggctgttt accaagctgt ttgaaaaagg catcgtctat cgcaaaaacg
     6841 gaacggtgaa ctgggacccg gtcgaccaaa ccgtccttgc caacgagcaa gtcatcgacg
     6901 gacgcggctg gcgttcgggc gcgttgatcg aaaaacgcga aatcccgatg tattacttca
     6961 aaatcacgga ttacgccgaa gagctgctca acgatttgga caagctggaa cactggccgg
     7021 aacaagtcaa aaccatgcag cgcaactgga tcggcaaatc tcgcggcatg accgtgcgct
     7081 tcgccgtttc agacgacagc aagcaaggtt tggaaggcga ttacgcgaaa ttcctgcaag
     7141 tttataccac ccgccccgac acgctgatgg gtgcgactta tgtcgctgtt gccgccgaac
     7201 atccgctggc aacagccgca gccgccgaca aacccgaatt gcaggcattt atcgccgaat
     7261 gcaaagccgg ttcggttgcc gaagccgata tggcgacgat ggagaaaaaa ggcgtgccga
     7321 ccggccgcta cgtcgtcaac ccgctcaacg gcgacaagct ggaagtgtgg attgccaact
     7381 atgtcttgtg gggctacggc gacggcgcgg tgatggctgt tccggcgcac gacgaacgcg
     7441 atttcgagtt tgccgccaaa tacaatctgc cgaaaaaaca agttattgcc gtcggcgaca
     7501 acgcattcga cgcaaaccga tggcaagaat ggtacggcga caaagaaaac ggcgtattgg
     7561 tcaacagcgg cgacttggac ggcttggatt ttcagacggc atttgatgcc gttgccgcca
     7621 agctgcaaag ccaaggtgcg ggcgaaccga aaacccaata ccgcctgcgc gactggggca
     7681 tttcgcgcca acgctactgg ggctgcccga ttcccatcgt ccattgcgaa aaatgcggag
     7741 acgttcccgt ccctgccgac caactgcccg tcgtcctgcc tgaaaacgtc gtacccgacg
     7801 gtatgggttc gccgctggca aaaatgcccg agttttacga aacttcctgc ccgtgctgcg
     7861 gcggcgcggc gaaacgcgaa accgacacca tggacacctt catggagtcg agctggtact
     7921 tcttccgcta tatgtcgccc aagttttcag acggcatggt atcggcagaa tccgcgaaat
     7981 actggggcgc ggtcgaccaa tacatcggcg gcatcgaaca cgcgattttg cacctcctgt
     8041 acgcgcgctt cttcaccaaa ctgatgcgcg acgaaggttt ggtcaatgtt gacgaaccgt
     8101 ttgaacgcct gctcacgcaa ggtatggtcg tctgcgaaac ctactaccgc gaaaacgaca
     8161 aaggcggcaa agactggatc aaccccgccg atgtcgagct gactttcgat gacaaaggcc
     8221 gccccgtttc cgccgtcctc aaagccgacg gactgcccgt cgtcatcagc ggcacggaaa
     8281 aaatgtccaa atccaaaaac aacggcgtcg atccgcaaga actgattaac gcctacggcg
     8341 cggacaccgc ccgcctgttc atgatgttcg ccgcaccgcc cgaacagtcc ctcgaatgga
     8401 gcgacagcgg cgtcgaaggt gcacaccgct tcctgcgccg tctgtggcgt accgtttacg
     8461 aatacctgaa gcaaggcggc gcggtcaaag catttgcagg caaccaagac ggtttgtcta
     8521 aagaactcaa agacctgcgc cacaaactgc attccaccac cgccaaagtc agcgacgact
     8581 acggccgccg ccagcagttc aacaccgcca tcgccgccgt gatggaactg ctcaaccaat
     8641 acgacaaaac cgacaccggc agcgaacaag gccgcgccgt cgcccaagaa gtattggaag
     8701 ccgccgtacg cctgttgtgg cccatcgtgc cgcacatctg cgaaaccctg tggagcgaat
     8761 tgaacggcgc gaaactgtgg gaagcaggct ggccgacagt cgacgaagcc gccctggtca
     8821 aatccgaaat cgaagtgatg gttcaagtca acggcaaact gcgcggcaaa atcaccgtcg
     8881 ccgccgacgc ctccaaagcc gacctcgaag ccgccgcact cgccaacgaa ggcgcagtga
     8941 aattcatgga aggcaagcct gcgaagaaaa tcatcgtcgt accgggcaga ctggtgaaca
     9001 tcgtcgtcta aaccgctttt aaggtttagc catacggata aaggccgtct gaaacttgga
     9061 aacagggttt cagacggcct ttttaaggca gattgggttg tctgcaagac agacctcaaa
     9121 tatagcggat taactttaaa ccggtacggc gttgccccgc cttgccctgc tgtctgcggc
     9181 ttcgtctcct tgtcctgatt tttgttaatc tactaaaaat taatctcaaa atccaaaata
     9241 tgaatttatt tttcgatacc caattgggaa agcaacaaaa taaagcaacc cacaaaatcc
     9301 gtgtaatgag cgaggcttgg ctggaaaaaa acggctattg cccctgttgc ggaagcaagc
     9361 cgatgcagag atttgccaat aacaaacctg ttgcagacct cttttgccca aattgccacg
     9421 agcaatatga attaaagagt aaaaatcaaa aaaccatagg caacagcgtg cctgacggtg
     9481 catatcgcac tatgttggag cgcatccggt cagataccaa ccccaacttt ttctttcttg
     9541 catataaaaa agcggattac tccatacggc aattggtgct tgtacccaaa catttcatca
     9601 cgccggatat gattattccc agaaataaag gcattaaaaa ccgaccgcac cacattatgt
     9661 gttccatcaa tctcgcccct ttgcctgaaa gcggaaaaat attcttaata gacgattccc
     9721 gcattatcga acccgaaacc gttctgaaaa aatggcaatc caacctgttt ttacgcaacc
     9781 aaaatgcgga gcgcaaagac tggcttttgg ctgttatgaa atgtatcgac caactcaccg
     9841 aagaattcac attgtcgcaa atgtatgaat ttgaaaacaa actatccatc caatttcccc
     9901 aaaacaacca tatcaaagac aaaatccgcc aacagttgca aattttgcgt gatcaaaata
     9961 tgatcgaatt cattggtcgc ggactttaca aaaaaatcga caaattgcac ccaactccca
    10021 aggcgttttg atttcaaatc atgatactga atttacgaga aatatttatt cttctgccat
    10081 tctaaaaacg gttgaagtac aacgcaatat tgccgcaaag ggcagcagtc gtaaaaaagt
    10141 cggagaatta ttggcaattt atgattgatt ttgacaaacc ggctgaagaa gctgccattt
    10201 atcaaagtcg tttgaaaaaa atcgtttcag acgaccttgt cctctacaac gaaaattccc
    10261 ttaacgtcat gcggaagata ttggaaaaac atccaaacgg ctgttttgat atgattttcg
    10321 cagacccgcc ttactttctt tccaatgacg gtttcagttg tcaaaacggg caaatggttt
    10381 ccgtcaataa gggcaactgg gataaatcca aaggaatggc ggcagatttg gaattttacg
    10441 aagaatggct ccgactgtgt tacgccttat taaaaccaaa cggcacaatt tgggtttgcg
    10501 gcacatttca taatatctat ttaatcggct acctgatgca aaccgtcgga taccatattt
    10561 tgaacaatat tacttgggaa aaaaccaatc cgccccctaa tttgtcctgc cgtttcttta
    10621 cccattcgac agaaacaatc ttataggcaa agaaaaataa aaaagccaaa catacgtttc
    10681 attatgaaat gatgaaagca caaaataatg gcaaacagat gaaatgtgtt tggacatttc
    10741 ctccaccaaa taaaaccgaa aaaacattcg gcaaacatcc gacacaaaaa ccactcccct
    10801 tacttgaacg ctgcatacta tcggcttcaa atatcggaga tttaattttt gaccctttta
    10861 tgggcagcgg cacaacaggc gttgccgcct taaaacatgg tcggagattt tgcggttgcg
    10921 aactggaaga agattttttt gaattagcaa agaaaaggtt agaaaaatga ttattggcgg
    10981 aatcggcggt gcaaggacac aaacaggact cagattcgaa gaacgtacag acttacgaaa
    11041 gttgtttgaa gaaattcccg ggtacgactt aagaaaaaca gatgataatg cgggttatga
    11101 agtttggttt aatggagaat tgaaggctta ttgtttcaaa aaatatgagt tttaccgatt
    11161 tttggaaaga ctggaataca atattaattg gaaagaccat ctgtctaaaa gattactgcc
    11221 cgataatggc ttatttatca tcatccgtga taccttattt attattgaga tcaaattcca
    11281 acaaactccc ggttcagtag atgagaaatt acaaacttgc gattttaaga gaaaacaata
    11341 tacaaagtta gttcactctt taggttggcg ggttggatat gtctatgttt tgaatgattg
    11401 gtttacaaaa ccggaatatt aaagatgttt tagattatat tatcagtgtt aactgccatt
    11461 accaatttaa cacgattccc ttaaggtggt ttggactgcc tgatggtgaa acaaatgaat
    11521 aaataccata tttaaaacac aaccgttcaa ggtcgtctga atatcatttc agacgacctt
    11581 tcaccaatcc ccgccgtttt ccatctttct gctattgtga taaagtagcc cgaccttttg
    11641 ttcaaaatac gcggattccg cgacactgaa tgcagcatct gccaaagatt atttgaaaac
    11701 ggtcgagtta gacaagtctg ccgacaatgt cgataccaca tccaaaacta tccgcagggt
    11761 ttaggcggta ttccagagta cggtgtctta tgctgatgct gtaaacaatg cccgtataga
    11821 aaatctaaaa cggttgttgc cgaccgttat gccggtttat gagcaaagtg tcagaaataa
    11881 ggggcgcgtt aataaaaaac gtcggcgtta agggaagggg atcgagaatt tgagccgttg
    11941 tttcaaaatg ccgtctgaaa tggtttgaga ttcagacggc atttaaacag ttctgcgccc
    12001 cgcccgtttt gccttcaagc ccgtgccgct taaatccaat ccccccctgc aacgggcgca
    12061 aaaaatcccc gtgcctcgcg gtcggggatg tttcgggttt cgcgcccgtc tgcgccgtgc
    12121 cttgctgtcg ggctatgccg tctgcaccgc cgccgtttcg gcttggtttg atgcggtcgg
    12181 gcatttatgc ggctacgccc tgatattcag ttcggcggtc ttgcctgtct tggcaggcat
    12241 attcagcagc gcgtctattg tgaacttgct gattttgccg tttgccaagt cggctacgca
    12301 atggcttcga tgcccttgtt tttgacgatg gtcagcagct tcaacgccgc gccgctcggc
    12361 tttttaacgc cccgctccca agccgaaacg tgatttttcc ccacgttgag atagatggcg
    12421 aaagcggctt gcgatagtgc ctccttctcc ctgattgcct tgatgtcccc gccgctcaac
    12481 ggcttgattt cggtcaggca ggacttgtca aagccgcgca tagtcttttt gtcgattgcg
    12541 ccgatgtcgt gcaatccctg catggtttcg tgtattgctg cgaaaatccc gcttttatat
    12601 ttcatggctg tatctccgtg aaaatgccgt ttgacttggc ttgctctatg tcggtttctg
    12661 tcattgccaa gatgatggcg gcggttttct ttaattctgt aagttcttta tcagtgatgt
    12721 tttcgcggtc gttcttggca aaggcggtca tgaaaaacgc ccgttctcca tgcctgaaaa
    12781 atatcagact gcgataaccg ccgcttctgc cttgcccttg ccttgctatg cgctgcttaa
    12841 tcacgcgccg cccaaatctg catctatcag cccgttatct gcccgctcta ccgcctctat
    12901 cagctctgaa tcactgattt tgtgcttctt ggcaaatttc actatccatt ggtttttgaa
    12961 tatccgcatt gtgcaaccgt ttacttagtg atactgggga ttataccaaa gacaggcaac
    13021 acggcaagcc gcctttttat accctgcaat ttctccgttt atgccgcctg aaacaccggc
    13081 ggctaatttg attatttttt aatcaatcgc ttttaatggc tcaaattgcg tttttagcgc
    13141 gtttcgctgt cttcctatgc cccgcaatat aaccaaccgg tttaaccgcc attcctgctc
    13201 aaaataggcg cggttccgtg cgttttggct tttcattccg ctacgctccc actgccaaga
    13261 cggtaaaaaa ccggaaaacc ccaaaagttg ttaccgattc gttaccattt gttaccgcat
    13321 ttgttaccaa ttttttatct ttttcttatt tttatagtga attaaattta aaccggtacg
    13381 gcgttgcctc gccttgccgt actatttgta ctgtctgcgg ttcgccgcct tgtcctgatt
    13441 taaatttaat tcactatatt tcatatactt atttatctaa cttttccccg gtaacaaggt
    13501 aacaactaag ggtatcgctt cctagtatag gttttttcca aaaacccaaa aaaaccgctc
    13561 tgcatcttgg acggtttccc cctcgttccc tacggttcgt cagtattccc cgcaagctct
    13621 tttccgcttg gcattcctga tttggtggtc gttcagcttt atttttgcgg tatttttcgg
    13681 atatcgtaaa aaatcaggtt agttcaatta gggcggattg gacgggattg cacagtcagg
    13741 aaggggacgg caggataaca atcagcctga aatccttgta ttgattggga ttggttgatg
    13801 gcatcagaca ggattaaacg aaaaaaaacg cctagaattt ctaagcgttt ttgtgtgttg
    13861 gtgccgacag cgagatttga actcgcacag cctacggcca ctaccccctc aagatagcgt
    13921 gtctaccaat ttcaccatgt cggcatttga aaaactgtta tttctgctgc tgaggaacag
    13981 gggcagaagg ttcggtattg cttacgggtt tgggtgcttg ctgagtctgt cgtatgttgc
    14041 tgaagtccaa accgtgtttt gtcgtgtggg tgtgaatata caccatagcc atgcaggttg
    14101 caaagaaaaa tgttgctgca acggcggtcg agcggctgag gaagttggcg ttgccggcag
    14161 agccgaatac gccttgcgcg ctgccgcttc ccgatccgaa ggtcgcgccg gcatccgcgc
    14221 ctttgccgtg ttggagcaat actaacacga tgacggccaa agcggaaata atattaataa
    14281 tccaaattag ggttttgaag gcttccatat ttttctacgc attttgtgcg gcactgatga
    14341 tggcggtaaa ggagtcgtac gacaatgacg cgccgccgac gagtgcgccg tccacataag
    14401 gtactgcgaa gatgtcggcc gcgttgtccg ctttcacact tccgccgtaa aggacgcgga
    14461 ttttaacatc gcttccgcac aaagacaaga tttctttgta gatgaatgcg tgcatatcgg
    14521 caatctgttc gacggtggcg actttgcctg tgccgattgc ccagacgggt tcgtaggcga
    14581 cggcgatgtt tttggtatcc agcccttgca ggatggaaag ctgatgggcg atgacttcgt
    14641 gttctttgcc ggtttcgcgc tcttcgaggc tttcgccgac gcacaataat gggatgagtc
    14701 cgacgttgag gacgttttcc attttgcggc gttggatttc gtttttttcg ccgaaataaa
    14761 ggctgcgttc ggagtgtccg atgaggacga tgtctgtgcc ggtgtcggcg agcatttcgg
    14821 cggacacttc gccggtgtac gcgccgttgt cggggaagcg gctcacgtct tgggcgcagg
    14881 tgaggatgcg gttgtttaag acgatttgca tggcgttgtg cagttgcagc aggtaaacgg
    14941 tcggggcggc gagtccgatg aggacgcgtt cggcggtggg gaggatgcgg aagcggtgca
    15001 tcagtgcgtt gttgttttgg agccggccgt tcattttcca gttgccgatg acccattttt
    15061 gatcccacat tccgatttgg cgatacatct tttttgctcc gtgtcgtgtt tttctgtctg
    15121 ccgcgtgtgg cgcgttgcaa tgtgaagttt agtggatatg cggcgggttc gcaacttggg
    15181 gcgggcggct gcgggggcgg tttggaatgt tgtttcgggc aggatgtttt ataatggctg
    15241 cctgatatgt atgcaaatat gggagatatg atgcacgcgc ttcatttttc ggcttcggac
    15301 aaggccgcgc tttatcgtga ggtgttgccg cagattgagt ctgtggtggc ggacgaggcg
    15361 gattgggtgg cgaatttggc gaacacggcg gcggttttga aggaggcgtt cggctggttg
    15421 tgggtgggtt tttattttgt cgatacgcgt tcggacgaat tggttttggc accgtttcag
    15481 ggacctttgg cgtgtacgcg gattccgttc gggcgcgggg tgtgcggtca ggcttgggcg
    15541 aagggtgaaa cggtggttgt taaggatgtg aacgcgcatc ccgaccatat tgcctgttcg
    15601 tctttgtcgc gttcggagat tgtcgtgccg ctgttttcag acggccgctg tatcggcgtg
    15661 ttggacgcgg acagcgaaca tttggcgcag tttgatgagg cggatgcttt gtatttgggc
    15721 gaactggcga agattttgga gaggcggttt gaggcttcga gtcaggcggc ttgagactgg
    15781 caaaacgggc gggcttcgcg tgccgaagtt ggcgcggcgg tagtgtggtt ttataatgcc
    15841 tgccattgat aaaacaatta tttgacggag cactaaatgg attttgaaaa agcgcggttc
    15901 aatatggtcg aacagcagat ccgtccttgg gatgtattgg attttgacgt gttggacgct
    15961 ttggaggaga ttccgcgcga gcttttcgtg gatgagtctt tgcagggttt ggcgtatgcg
    16021 gatatggagc tgccgcttgc caacggtcat aagatgctcg agccgaaaat cgtggcgcgg
    16081 ctggcgcagg gcttgaagct gacgaaaaac gatacggttt tggaaatcgg cacgggttcg
    16141 ggctatgcga cggctctgtt ggcaaaactg gctggccgtg tggtttcgga cgacatcgat
    16201 gccgaacggc aaaagcgcgc caaagcggtt ttggacggct tgtctttgga aaacatcgat
    16261 tatgtgcaaa ataacgggtt gaccgaactt tccgcaggtg cgccgtttga tgcggtttac
    16321 gtcggcggcg cggtaaccct tgtgcctgaa gtgttaaagg aacagttgaa ggacggcggg
    16381 cgtatggcgg ttattgtggg acgcaggccg gtgcagcgcg cgcttttgat tacgcgcagg
    16441 ggcgatgtgt ttgaagaaaa ggtgctgttc gatactttgg tggcgcattt ggacgacaag
    16501 gatgcccatc ctttcgacag ttttaatttt tgatgttcgg attgtgatgc cgtctgaaag
    16561 cgggtttggg gcttcagacg gcattttgct tggttttttt cggggggttt gtgatggata
    16621 ttgtgcaact tccgtcggcg gcattgaagg cgtggatgga cgaagggcgg atgttttgtt
    16681 tgttggacgt gcgtacggat gaagaagcgg cggtttgttc gctgccaaat gcgctgcata
    16741 tcccgatgaa tctgattccg ctgcggcaaa acgagttgcc ggacgatgtg ccgcttgtgg
    16801 tgtattgcca tcacggtatc cgcagcctgc atacggcgat gtatttggcg gaggcgggtt
    16861 ttgaaaacct gtacaacctt cagggcggca tcgacgcgtg ggcggttgag gttgacgcgg
    16921 aaatggcgcg gtattgaagg cggcttcaga cggcattcct taaatgcgtg tacctctggt
    16981 gttccataaa ggtcgtctga aagtgcagct tctgcgaagc taaagcgcag tatcaacgaa
    17041 gttaaaattt gcctgaacct taaaggcagc ctgcacccca attccctcgc cccgtgggag
    17101 aaggctaggg agagggcggc aaactgcagg tttgcttggg cggcattttc aatgtgcagg
    17161 ctgcttttag cttcgcagaa actccgtttt cagacgacct tatttaaacc gataggtaaa
    17221 cgccgcgttc actgtccgca gtgcgccgta gctgtggcgg tcgggctggg tgcggtagtg
    17281 tttgttgaac aggttgtcca cgttcagcga cagttcggtg cgcggattga agcggtaacg
    17341 cgccatgatg tcggcgacgg cgtaggcttt ctggcggctg ttggcgacgg cgcgggcttt
    17401 ggcggcgggg ttggggatgc ggagcgcggc tgggtcggtg tgggtttcgc cctgccggcg
    17461 cacacccgca ccgatggtcc ggccgctggg ggcttcgggg gctaagtggt aggcggtgaa
    17521 gagtttgaag ctgcgttcgg gtacgctgtc ggggttcagg cggctgccgt cttggtcgcg
    17581 gggtttgctt tggctgtagc ctgcctgtat ctgccattcg ggcgtgatgc ggccgccgac
    17641 ttcgatttcc cagccgtggg ttttggcttg gttggcggcg cgatagtagg tgttgccgct
    17701 ctggtcgcgt cctgctgcgg tggcgaggtt gtttttacgg gcgcggtaca cggcggcgga
    17761 tgcgttcaga cgcccttcaa gccattcgcc tttgatgtcg gcttccagat tgttgccggt
    17821 tacgggtttc aggtagctgc cgtgttcgtc tttttgcaat tgcgggacga acaggctgct
    17881 gtacgagccg taaagcgaca ggttgccggt cagatcgaac acgatgcctg tgtagggggt
    17941 gaaacggttg gcggacacat aggtcatgcc ttgtgtgcgg ctgttgtagc tgcctgcgcg
    18001 gtagcggctg tatctgccgc cgagtatcag cgaaaggttg tcggcggcgc ggaaacgggt
    18061 ggcgagatag ccgccgattt gccgcctggt gtcgtattgc gggatggttt gggcaaacga
    18121 tgatggctgc ggataggcgc ccgtgcggga aaattcgtag gcgttgggaa tggcgttggg
    18181 aatgatgctg cgttcgccgt atttgttgct ggcgtatttg tagccgttga tacccgcgat
    18241 taaatcgtgc tcgcggccga acaggcggta tttgccggtc aatgacatgc tggcgctgtg
    18301 ggtgcgcgga tcggcgtgcc aataaccggg aatcaggtcg gtggcggcag tgctgtggtc
    18361 gatggaaagt acgcctgcca caccgtaggg ctggcggaag cggctacggg tgtagtcgta
    18421 ttcggctttg agtttccagt cttggttgaa gcggtgttct atgccggcga acaggttgag
    18481 cgcacggttg cggctgttcg accaatttgt ggcggggttg tcttttgggc cgaaggcggt
    18541 ggcataacct tggctgtcgt acacggcgta gctgagcggc gcgtctgcgg tttctttcgc
    18601 ctgctggtag tccatgcctg cgtggacgcg ggtttgcggt gcgatgtcgt attccaaaat
    18661 gccgtagagt tcggcatcgc ggctgcgttc gagctgccgc cacgagtcgc cgcgtccgaa
    18721 ggtggaaacc aggcggccgc gcagcgtgcc ttcggcgttc aggctgcccg atacgtccgc
    18781 gcccagcccg aaatgtttgc ggttgccggc ttcggcgcgg acttcaaaca atggcttgcg
    18841 ggtcgggtgt ttgcgtacca gattgacggt ggcagaaggc tcgcccgtgc cgtccggcag
    18901 ccccgccacg ccgcgcacga cttccacgcg ctcataggcg gcggtgttgg cattgcccgt
    18961 atcggccagc gcgtcggcaa cggggatgcc gttgatttgg tagttggcga tgcggctgcc
    19021 gcgcgcgaac aggtagttgt agcccgcgcg gtcggagccg taaatctggc ggctggtgcc
    19081 ggtcgcctgc aacagggcgc ggtcgagcgt tttgatgttt tggtcgcgca tttgttgcga
    19141 tgtgatgacg ctgacgctct gcgggatttc gcgcagggtc atgggcagcc cgaacggggt
    19201 gtgcgtgccg gaaacggtgt agccgtcgtt ggaactcgcg gtgcggtcgg cggtaacggt
    19261 gatggtcggc aattcggtgc tttcctgcgg tttggggtcg tctgaaacag aaacatcggc
    19321 ctgcgcgtac acgggtagca gggcggcaaa aagcagggag tatttgaagc gtgtcatggg
    19381 gtttcctttg tgtgttggtg tgcggtgggg ttgtatagcg gattaacttt aaaccggtac
    19441 ggcgttgccc cgccccggct caaagggaac ggttccctaa ggcgcccaag caccgggcga
    19501 accggttccg taccattcgt actgcctgcg gcccgccgcc ttgtcctgat ttttgttaat
    19561 cctctatgct tttggcatat tgaaggtgta ggctgctttt agcttcgcag aaactcagct
    19621 tccttcggaa acttcgtttt caggcggcct cggacgggtc gggcagatca atcagcacca
    19681 ccgagcagcc gttttccgaa cgcgggcggt gcgacaccga cttcggcacg accgccatct
    19741 cgccctcgcg tatcgtcatg ttgccgccgt cggcgaagtc caccgccatg tcgccctcca
    19801 cggcaaacag cactttgtcg ctgtatccgt gcgtgtgcca gccgtaatcg cccaaaagtt
    19861 tgaccaggcg gaattggaac ccgtggcggt tgatgatttc gggctgccag tattctttga
    19921 tggcggcaag gtgctgtttc aggttgatgg tttcgttttg catggggttc tccttgtggt
    19981 ttgttttgaa taaaactact gcgccgcaac gggttctgcc ttttcaaacg ccgccttcaa
    20041 ctgttccgcc gcctgtatca actgccgcgc gccgcccgcg acaatgtagt tcgcggcagg
    20101 catgacgatg atttgcttgc gcttccaagc gttcgtgccg cataccagcg cgttatccaa
    20161 cacttccacg gcagccggcc cttcctgccc gatggcggcg gtgcggtcga tgatgaaaat
    20221 ccagccgggg tttttctctt tgatgtattc gaaggaaacg ggctgcccgt gcccttcgtt
    20281 gcgtaaagat tcgtccacgg gcggcaggcc gatgtcgccg tgtatccaac ttgccaaccg
    20341 cgattgcgtg ccgaaggcgg acaccttgtt gcctgtaacc gacagcacca gcccgcgtcc
    20401 tttgcctttg gcggcttcgc gcttttgggc gaacagcgcg tcaatctgcg cattcaattc
    20461 cgccacgcgc gcttccttac cgaaaatccg cgacagggtc tccatctgct tctcgccgct
    20521 ggtgcggata ttgccgttgt ccaccgtcaa atctatggtg gtcgcgtttt tcgccaactg
    20581 ttcatacgct tccgcacccg gcccgccggt aatgacaaac tgcggattgt ggcggtgcag
    20641 ggattcgcaa tcgggctcaa acagcgtccc caccgttgcc gccttgtcaa atgcaggctg
    20701 caaatagtcc acgcgcaccg gcgcggtggt tgcgcccaca ttcacgcccg gctcggtcag
    20761 cgtatccaac gccgcccagt cgtacacggc gacgcgttcg ggattcttcg gcacaacggc
    20821 atcgccccgc gcggtcggca cggtcagcgt ggcgacaggt gtggatgcgg cttgggatgc
    20881 ggcggataca gttttttcgg cggcaggttc gggcgaacag gcggccggca ggacggcgca
    20941 ggctgcccaa taaaaacgcg gtttcacggt gtgcggttcc tttgcatacg aataagaatg
    21001 tttattatta agcaaacaac ctgcagaaac cacgccgcaa aacgcaaaat tcccgatacg
    21061 gcaaaacaaa ttcccgaaac ggaaaaggtt gtctgaaaca ccctttcaga cgaccttttc
    21121 cgttccaacc aatccctgtg cttgattatt ggtaataatt cctatttaat tcatttgtta
    21181 gacaactcgt tcctatccaa tcatgaacac cgccgccatc taccgccagt accaaaccta
    21241 tgtccgctcc gataaatccg gctgggcgtt ggacggctgt tccgacagcg cactcattgc
    21301 gcaggcaaaa cagcccggtt tgcatctgaa aatgtgcatc aaccgcttcg actcgggcat
    21361 caccttatca cggatgcgcg gcggcggaac gggtgcgttt cccaccgaaa tccacaattt
    21421 cagccacaac tgcgccttgt tcgtcatggt atcggggcag aaccggttac aaatgggcgg
    21481 cagggaatac cgcccgtctg ccggcgaaat ctggctggta cgcggcgaac tggcggacgt
    21541 atccgaaacc ctgctgccag acagcggcgg catgtgcgcg ctgcatttgg atttttcgct
    21601 ggaaaaactg cgccgctggc acgacgaagg tttactggac gaacgcctgt tttcgccgca
    21661 aacgataggc cgattcgccc tgcaacggct ggcgcaaaac gcggggacac tgacggcggc
    21721 ggcctgcccc ctgctgcaac gcccgttcga atcggacggc ttcggcctgc tcgccgacga
    21781 agccgacgcg ctggaactct ccgcccgatt attacgcttc accttccgcc gccacgacaa
    21841 cggctaccgc cgccggcgca tagacgaagc cgccgatatt ttgaacagcg aattcgcccg
    21901 cccgctgacc atcgccgaaa tcgcccgccg cgtcgggctg aacgaatgct acctgaaacg
    21961 ctatttcaaa gcgcaaaccg gcgaaaccgt cgccggacgc ctgcgccgcc tgcggctgga
    22021 acacgcgctc gccctcatca aatcgggcag caccatccaa gccgcgatgc acttttgcgg
    22081 ctaccgccac gcgggacggt tcaacgaagc gttcaggcgg cattacggat ttttgccttc
    22141 ggatgtgaaa aagtgctgat gggccgacgg catagatatt ttgatttgaa acaaccatta
    22201 aaaaagatcg tctgaaaaag caatttcaga cgatcttttt tcattcgcgg cggcagtgtc
    22261 gccccctgcc cttatcccaa aaattctttc aaaaacagca acacgcaggc gagtttgtcg
    22321 gcggattcgc gttgggtgcc gttgccggta tggccgccgc cgtcaggcga gtagagccaa
    22381 gattgcggcg aggtttcgcg cagtttggcg tagaatttga gcgcgtgggc gggatggacg
    22441 cggtcgtcgc tgaggctggt ggtaatgagt gcgggcggat aatcgatgcc gtctgaaaga
    22501 ttgtgatacg gcgacaattc gcccagccgg cgtttgcagg cttcgtattt ctgcggattg
    22561 ccgtattcgt ccgtccaact tgaaccggcg gacagcagcg gataacggat catatcggtc
    22621 agcggtactt cgcacaccag cgcaccgatg ctttgcggtt cgcgcacgaa ggcggcggcg
    22681 gtaatcaggc cgccgttgct gccgccctgc aagccgatgt gtttgggcga actcatgccg
    22741 cgttcggaca aatcacgcac gactgccaac aaatcatcaa cgcttttgtg tttgctgatt
    22801 ccctgcgccg cctgatgcca gcgcgggccg aattctccgc cgccgcggat gtttgccaat
    22861 acaaaggcat tgccctcttc cagccaatat ttgccgacgc tgcccagata atgcggcaat
    22921 tcaggaatgc cgaaacctcc gtaagcatag actaaggtcg gcgtgtcggg cgcggcgttt
    22981 ttgccgacgt ggaaataagg aatgcgttcg ccgtcggacg acaccgccca aaactgccgc
    23041 acttcgatgc cgtctgaaac aaactgctgc ggctggaggc gcatgacggt cagttccatc
    23101 acgttcaaat ccagcgcaaa cagcgtcagc ggcgtggtga aatcgctggc ggcaagataa
    23161 accacgtcgc cgccccacgg ttggtcggtc atttccaacg cgccggaggg caggtgcggc
    23221 aactcggctt cctgccattt gctgtcggca aaccgccacg ctttcagacg gccttgtaca
    23281 ttctccagca ggcttgccac cacaaaacgc ttggtcgttt ccacgctttc caatgcctgc
    23341 gtttcatcgg gcgcaaacaa aagctgcgcc gccccgagtt cgccccgatt cagtttcacc
    23401 gccaccaacg cgccactcgg atagctttgg ttcgcgcggt gccagtcctt gcgcagcgtc
    23461 agcaaaagat gtcccgccag atagccgacc acatcgcaat cattaggcag gttcaacggt
    23521 ttcgccccgc cttcggacga cacctgcaaa tacgtcttgg tgtaaaaacc gtccgacgct
    23581 tcaatcaaat caatcggcga accctgcgga tcgaggtaac gccacgcgtt taccatcatc
    23641 gcgcctttat cgatttggta cgccggcagg ctttcctcga aactcttgcc gcgttccacc
    23701 agccacactt cgcgcggata gcccgattcg gtcaactggc gttcgtccca agccggacac
    23761 acccacacgc tgttttcatc gcgccacgac acatggtttt tgcctgccgg aaagtgaaaa
    23821 ccgccctcta ccaattcccc tgcttccaaa tccacttcca gcgtatacgc cgtatcgccg
    23881 cccgatttgt tcaaagtcag cagcgcgcgg ttgggctgct ccaccaagtg cgacacgccg
    23941 cccaaataca catcgtcgcc gagcaactca tcgaaatccg ccaccgaaaa caggattttc
    24001 cactcgggat agccggaacg gtaggtcgcc gccgtacaca tgcggtacac gcccttcgga
    24061 tattccgcat tctgatggaa atggtacatc cgcgcgcggt gttcctgaca aaacggaatc
    24121 tgccgcgtgt cctgcatttg attcaaaatg ccgtctgaaa gtgcgcgcgc cttgtcgttt
    24181 tctaaaaaac gcgcgcgcgt ttcggcattc gcttcagcag cgaagttttg cgtttcggcg
    24241 gaatcgaggt tttcaaaatg gcggtagggg tcggggtagg atttcatcgg ggtccttgag
    24301 ggtcgggcag gtctttgtca tcggggaaat gccgtctgaa acggggttca ggcggcattt
    24361 ctgcggcggc tttccgttgc ggtcagcggt gcaggcgacg caccagaata tgcgggtttc
    24421 gtccgttgct gcggtagtct ttgcgccgcg tttcgggcag ctcgtcttcc gatgccgtct
    24481 gaaagccgcg ttcggcaaac cattcgccgg tatttgtgga cagtgcgaac agcctgctta
    24541 tgcctatgcc gcgcgcctta tcgataatgt gggcaagcag gcgttcgccg tagccgccgt
    24601 cctgtgcctg cggcgagacg gcaaggcagg cgatttcgcc gcaatcggct tcggcaaagg
    24661 ttttgagtgc ggcacagccg tacaggttgc cgtcgtgttc gaggatggaa aattcggaaa
    24721 tgtggttttc gaggtattcg cggctgcggt gcaataggat gccctgttct tccagcgggc
    24781 ggatgagggc ggcgatgtgc gggatgtcgc cgctgtgcgc ctgccggatg gagacgaagg
    24841 cttctttggc aatggacgtg ccgatgccgt tgcgggtgaa gagttcttgc agcaggctgc
    24901 cgtcggcggc cccgttgagg atttggacgc gatgcacgcc gccttcgagc gcggcaacgg
    24961 cggacgaaat cagtcgtcgg gtttcgctgg cggcgtgttc cgccagcgat tgcgcttcct
    25021 gtgccgagag ggtttcggcg agcgtgccgt cggggcggga aatgccgtct gaaagggtca
    25081 ggtaaacgag tttttcggct tgaagcgaga cggcgacgga agcggcggcc tgcaccatat
    25141 cgagattgaa ggttttgccg ccgtaggaat gcccgagcgg cggcatccag acgatattgc
    25201 ccgcgtcgag ttggaaacgg agggcggcgg tgtcggtttt gcggataacg cccgcgtatt
    25261 ccatatcggt tccgtcaatc acgcctatcg gacgggcggt caggaagttg cccgatacga
    25321 gcgggacgga aggcgcgcgc gcgaatcctg aaacgctgcc gcacaatgcg gcttcaaaac
    25381 ggctgcggac ggtgccggca aactgctgcg cctgtccgag cgaggtttcg tcggtaacgc
    25441 gcaaaccccg gcaataatgc ggcgtgcggc cttgcgcggc ggcgaggcgg tcgaggaagt
    25501 ggtacgcgcc gtggatgagg acgagtcgga tgcccagttg cgacaacagc ccgatgtcgg
    25561 cggcgagctt atttaaggtg ccgccttcga gcaggcggcc gtctatgccg gcgaccagtg
    25621 tcgtgccgcg catttggcgg atgtaggggg cggcttcgcg gaagtgggcg acaaagctgt
    25681 cgggcgcgtt cataggatga agaggtagga aagctgcata atgaggacga taagtgcgaa
    25741 cagggttgca atagtccagt tgagcccttc ctgacgggcg ggcggtacgg aaacctgcgg
    25801 tgcggcggca ggtgcggcag cggcggttgc gggcggcgta tcgtgcaggg ttgtaccgcc
    25861 gttgaggata tcggcgattt cgtcgcggga aatctgtttc ttgctaatgg cgtgcgtgcc
    25921 gatgcggtgg acgagtttga catccgaaac agcttcgggc aaatcgttga atataggttc
    25981 tttcgtgctt gccagatggt ctttggcttt aagcagccct tcgcattttt ggcagacgac
    26041 gaagccttgg gcgacgttga gctgggtttc tttgacccag aggcgggttt tgcagtgcgg
    26101 acagaaacag gcgggcatga tgttttctcg gtgtgtgtcg gtttgatgcc gtctgaagcg
    26161 gcaggtggtt cggacggcat atgctttatt tttattctac gccgtactgc cggcggtagg
    26221 tgcggacggg ttcgaggaac tgtccgaatt cggggttgtt ttgcaacagg ataaacaaat
    26281 cgttcaggct ggcgatgggg gcgacgggca ggccgtattg tttttccact tcctgaacgg
    26341 cggacaattc acccgtgcct ttttccatgc ggtcgagcgc gatggcgaca ccggcggggg
    26401 ttgcaccctc cgcttcaatc agtttgattg attcgcgtac ggatgtgccg gcggaaatca
    26461 cgtcgtcgat aatcagcacg cgccctttaa gcggcgcgcc gaccaacacg ccgccttcgc
    26521 cgcggtcttt ggcttctttg cggttgtagg caaacgggac gttcacgcct ttttccgcca
    26581 gcatcatcgc ggttgccgcc gccaaaataa tgcctttgta ggcggggccg aacagcatat
    26641 cgaatcggat gccgctttca atgatggatt gtgcatagaa ttttgccagt tgcagcgtgg
    26701 acaagccgtc gttgaagagg ccggtattga agaaataggg cgaccgccgt ccggctttgg
    26761 tggtaaattc gccgaatttc aaaacatttt gggcgaggga gaatttgagg aaatcttggc
    26821 ggaaatcagt cattttgtgc tttctgtcag atattgggac gcagttgcga ttctaccgcc
    26881 ccgtgcggcg cgcttcaact gccgccgcct tgccgcaagg cgcgtttcaa ctgtttcaac
    26941 acctgccagt ttcgggcttt gagttcgggt tggcgcaaca gccgggcggg atggtcgatg
    27001 atgaagaagg gacggctgcc gcacaaagtt tcaatcatcg cctgccgttc caggttgaca
    27061 aacgcctgtc cgaggaatag gacggcgggg gcgcggcagc cgtcgagttc cccggcgatt
    27121 tgacccagcg catccgcgac ggcctgttca gacggcatcg ggttaccgac ggcggcggtt
    27181 ttcacccaac aggttttgtg gacataggcg gcatccagtc ctgcggcttt gaggatgttg
    27241 tcgagcagga tgcccgcttt gccgtggaac agttgcccgt aaaccgcatc ctcgatcggc
    27301 ggacacaggc tgacgacggc aagcttggta atgcccgaag cggcgggaac gggggcgatg
    27361 ccgtctgaaa ggccgggcgg gggcgtttcg gtttcaggcg cgggtttgcg cgtatgtacg
    27421 gcggcggttt ccaacgcttt catcgtttcg agccgcgcct gaacgttatg gggttgggaa
    27481 gggcggatcg tggcggcgcg gacggtttgg ggacgtgcct gtgccggggt tgcgggtgtg
    27541 tttttgggcg gcaggacggc ggcggcctgt ttcagccaca tcggacccaa gcccaaagcc
    27601 tcgtgcaggt ggaggtagcg cgcgcttaac atattttctc cattaagacg gcatcttcgg
    27661 tttgcccgtc ggcggcgcag taatagtttt tccgcctgcc cgcaatgctg aagccgtgtt
    27721 tggtatacag tgcctgtgcg gcggcgttgc ctgcgcggac ttcgagcagc aggcgttgcg
    27781 tgccttcggg cagatgtgcg taccaatatt cgagcagggc ggacgcaacg ccccgtcggc
    27841 ggcattcggg cgcggtggca atcaggtgca gttcggattc gtcgggcagg ttctgccaaa
    27901 cgataaaggc ggcaatcctg ccgtcttttt ccgcaaggaa aacctgttcg gacggcgaaa
    27961 caagcgcgga ctcaaattgg cgctgcgtcc acgcggacgg gttgcagacg gtatcgagcg
    28021 cggccagtgc ggcgcagtcg gacggtaagg ctgggcggat gttcatgttc gtgccttccg
    28081 ttccgcctgt tctttggcag tcagggcgat tttgttgcgg acgtagagca gttcggcgtg
    28141 tgccgcgcca gttgcgggat agccgccgcc gagggcgagc gcgagaaaat cggcggcggt
    28201 cggcatatcg ggtttgcctg agaagggcgg acggttttcc agtgcgaacg cactgccgat
    28261 gccgtctgaa aagacgtacc cctcggggag ggcaatgtct gccgccctac cgacttgata
    28321 atcgctcaaa cggcggcggt tcagcgtgtc gaaccacgca taaaacactt cgcccatacg
    28381 cgcgtccgca gcggcgagta tgcagctttg cggcggcggc agcgaggcgg cggcatcgag
    28441 cgtggggatg ccgattaaag gcgtgtcgaa cggcgttgcc aaaccttgcg ccacgccgat
    28501 gccgatacgc agtccggtaa acgcgccggg gcctttcgca taaacaatcg cccccaaatc
    28561 ggcggcggta atgcccgcat ttcggaatag ggtgcggatt tccggcagga tcagttcgga
    28621 ctggcggatg ccgacttcct gatggaacag acggatttcg ccgtcggcgc gcagcgcgag
    28681 cgacaaatag gaagttccgg tatcgacggc gaggacgggg cggttgaaat cggcttgcat
    28741 ggtgtggttc tcgttggttc agacggcatt atatagtgaa atcggcttgc ctgccgtgcc
    28801 gtcgtgtcct agggcggtat ggcgcaaaaa tgccgtccga acggtaaatt atcgtgttcg
    28861 gacggcattt ttcaaatact actgtttgtc ggcgatgccg atttcgtgaa ccttttcccc
    28921 tatcttcacg gttgccgagc cagcgatttc ttgggcgcgg ccgccgaaaa gggcgaggcg
    28981 gtaagtgcct ttctcttcgc cgccgtagcg cgtgtcgccc aaaatgacgg cgtgtgattt
    29041 ttcatctgct ttgagttcgg cggaggcaag ctcaacattc tgctcgggtg ttttcaggtg
    29101 ttcgattttg ccgtgtccct gtttggcggc gaaatctatg gtataggtca gttttccgcc
    29161 ggcatcgtcg gagctgaatg ctttgccgtg atactcggct ttgccgtcag gcagttggtt
    29221 gaaggcggta tgttctccgc ccaaatcgct gacaaggaag gagcgttggt ttatcaggct
    29281 gtcgattttg tcggggttgt tgattttttc aatccgtagg gcaacgacgg cggagtgatc
    29341 ctgtttgtat atttgaaatt cgccgcttgc cagtgtgatg gtttgtccgt ccacttcgat
    29401 tttttgcacg aagtcgaagc ggctgatttt gtcgttcttc agtttgcccg tgttgaggct
    29461 gttgtctttg ccgccggctt tgaaagtttt ttccgcacct tgtgccgaca gggtcagtgt
    29521 tccgttttgg ggaatggagg cttccaatgt tagggatttc aaacctttgt ctttatggtc
    29581 gagcggcgcg gttaatgcat cggcaagccc cgtgccgatg tcggcggcga caccaccgcc
    29641 tccgcccctc cgctgctgca ggcggtcaga atcagggccg gcggtcaaag aaaggcagca
    29701 gaaggtagtt cggttcacag gtttactcct agtcatacac agaatagata atatataaac
    29761 gttttggtta tggtatcttt ttttgcatac tgcatcaatg aggcaggtca gagaagcaaa
    29821 aatcaaatgc cgtccgaacg gcgttcagac ggcattttgt ttacaggcaa cctgttattt
    29881 gacgatttgg ttcaattcgc ccttggcata acggcttgcc attttttcca acgaaacagg
    29941 tttgattttg cctgcctgac cttcgcaacc gaacgcaaga taacggtcga ggcagatttg
    30001 cttcatcgct tcaatggttt tgcccaagta tttgcgcgga tcaaagtcgg acgggttttc
    30061 ggcaaggtag cggcgtaccg cgccggtgga agcgaggcgc aggtcggtat cgatgttgac
    30121 tttgcgcacg ccgtgtttga tgccttcgac gatttcttca accggcacgc cgtaggtttc
    30181 gccgatattg ccgccgtatt cgttgatgac tttcagccat tcttgcggaa cggagctgga
    30241 gccgtgcatc acgatgtgtg tattgggcag ggcttggtgg atttccttga tgcggtcgat
    30301 acgcaatacg tcgcctgtgg gcggacgggt gaatttgtat gcgccgtggc tggtgccgac
    30361 ggcaatcgcc aatgcgtcaa cgccggtatc tttaacgaaa cgcacggcat cttcaacgct
    30421 ggtgagcatt tggtcgtgtg agagtttgcc tgccgcgccc actccgtctt cttcgcctgc
    30481 ttcgccggtt tcgaggttgc ccaatacgcc gatttcgcct tcgacggaca cgccgcaggc
    30541 gtgggagaag ttgacgacgg tacgggtggc gttgacgttg tattcgtaag aagaaggggt
    30601 tttgccgtct tcgagcaaag agccgtccat catcacggag gagaagccca gttggatgga
    30661 gcgttggcac acgtcgggcg atgcgccgtg gtcttggtgc atcacgacgg ggatgtgcgg
    30721 aaattcttcg actgccgcca gaatcaggtg gcgcaaaaac ggcgcgcccg cgtatttgcg
    30781 cgcacctgcg ctcgcctgta cgatgacggg cgcgttgact tggtcggcgg cttccataat
    30841 ggcgcgcatt tgttcgaggt tgttgacgtt gaacgcgggc aggccgtagc tgttttcggc
    30901 ggcgtggtcg agcagttggc gcatggatac gagtgccatt tgtgtctcct tgggcaatag
    30961 gtaaataagg cggattataa tgttttttac ggcaaaaaac cataaacggc tcattgattt
    31021 tatattaacg ataacggcgg gcagatgggg cggattttgg gcggttcggg attttggtgt
    31081 gttgtttatg ataatgtttt cactggtttt ttgatatttg tgtgggacgg ttatggtttt
    31141 ggacgggttt gcggcgtatt ttgacgctta tttggaaaac atcgtgcgcg agggcaagtc
    31201 ggagcacacg gttgcggcat accggcgcga tttggaagaa ctgtttgcac tgttggcaca
    31261 aatgccgtct gaagatgcag gcggcgtgcc gcaggacttg tcgcggcgcg attttacggc
    31321 ggcgttgcgg cggctgtcgc agcgcggttt ggacggtcgg acgctggcgc gcaagctgtc
    31381 ggcgtggcgg cagtattgcg cctggctggt caaacgcggg ctgatgcgcg ccgacccgac
    31441 cgccgacatc aaaccgccga agcagcccga gcgcgtaccc aaagccctgc cgcaggaatg
    31501 gctgaaccgg atgttggatt tgcccgtgga cggcggcgac ccgctggcgg tgcgcgacca
    31561 cgcgctgttc gagctgatgt acggcagcgg tttgcgcgtg agcgagatac acggcttgaa
    31621 tgcagatgat gtatatttgg acgaagcgtg ggtacacgtt accggcaaag ggcgcaagca
    31681 gcgtcaggtt ccgctgaccg gcaaaagcgt ggaagccttg aaaaactatc tgccgctgcg
    31741 tcagacggca tcggacggca aagccctgtt taccggcagg aacggcacgc gcctgagcca
    31801 acgccaaatc caaaaacgcc tcgaatcgtg ggcggcgcaa tacggcgacg gcaggcacgt
    31861 ttcgccgcat atgatgcgcc acagctacgc cggccacctg ttgcaggctt cgcgcgacat
    31921 cagggcggtg caggagctgc tcggacacag cagcctttcg accacgcaga tttataccaa
    31981 gctcgatttc gaccacatcg cccgcctcta tgacgaagcc cacccgcgcg ccaagcggca
    32041 ggacgaatga catacggcaa aatcagccgt cagccgcacg ctcttgatat ataattgacc
    32101 gttgcacccg gacgacacat aaaaaagaca caccatgaac ccaagccccc tactcgacct
    32161 gattgacagc ccgcaagatt tgcgccgcct ggacaaaaaa cagctgccgc gccttgccgg
    32221 cgagttgcgc gcctttctgc tggaatctgt cgggcagacc ggcgggcatt tcgccagcaa
    32281 tctgggtgcg gtcgaactga ccatcgccct gcactatgtg tacgacacgc ccgaagacaa
    32341 gctggtgtgg gatgtcggac accaaagcta cccgcacaaa atcctgacag gcaggaaaaa
    32401 ccagatgcac accatgcgcc aatacggcgg tttggcgggt tttccgaaac gttgcgagtc
    32461 cgagtacgac gcgttcggcg tggggcattc ctccacctcc atcggcgcgg ctttgggcat
    32521 ggcggcggcg gacaaactct tgggcggcga ccgccgcagc gtcgccatca tcggagacgg
    32581 cgcgatgacg gcggggcagg cgtttgaagc cttgaattgc gcgggcgata tggatgtgga
    32641 tttgctggtc gtcctcaacg acaacgaaat gtcgatttcc cccaacgtcg gcgcgttgcc
    32701 caaatatctt gccagcaacg tcgtgcgcga tatgcacgga ctgttgagta ccgtcaaagc
    32761 gcaaacgggc aaggtattag acaaaatacc cggcgcgatg gagtttgccc aaaaagtcga
    32821 acacaaaatc aaaacccttg ccgaagaagc cgaacacgcc aaacagtcgc tgtcgctgtt
    32881 tgaaaatttc ggcttccgct acaccggccc cgtggacgga cacaacgtcg agaatctggt
    32941 ggacgtattg aaagacttgc gcagccgcaa aggccctcag ttgctgcacg tcatcaccaa
    33001 aaagggcaac ggctacaaac tcgccgaaaa cgaccccgtc aaataccacg ccgtcgccaa
    33061 cctgcctaaa gaaggcgggg cgcaaatgcc gtctgaaaaa gaacccaagc ccgccgccaa
    33121 accgacctat acccaagtat tcggcaaatg gctgtgcgac cgggcggcgg cagattcccg
    33181 actggttgcg attacccccg ccatgcgcga gggcagcgga ctggtggagt ttgaacaacg
    33241 attccccgac cgctatttcg atgtcggcat cgccgagcag cacgccgtta cctttgccgg
    33301 cggtttggcg tgcgaaggca tgaagcccgt cgtggcgatt tattccacct ttttacaacg
    33361 cgcctacgac caactggtgc acgacatcgc cctgcaaaac ctgcccgttt tgtttgccgt
    33421 cgaccgtgcg ggcatcgtcg gcgcggacgg tccgacccat gccggcttgt acgatttgag
    33481 cttcttgcgc tgtgtgccga acatgattgt tgccgcgccg agcgatgaaa acgaatgccg
    33541 cctgctgctt tcgacctgct atcaggcgga tgcgcccgcc gccgtccgct atccgcgcgg
    33601 cacgggtacg ggcgcgccgg tttcagacgg catggaaacc gtggaaatcg gcaagggcat
    33661 tatccgccgc gaaggtgaga aaaccgcctt cattgccttc ggcagtatgg tcgccaccgc
    33721 attggcggtt gccgaaaaac tgaacgccac cgtcgccgat atgcgcttcg tcaaaccgat
    33781 agacgaagag ttgattgtcc gccttgcccg aagccacgac cgcatcgtta cccttgaaga
    33841 aaacgccgaa cagggcggcg caggcggcgc ggtcttggaa gtgttggcga aacacggcat
    33901 ctgcaaaccc gttttgcttt tgggcgttgc cgataccgta accgaacacg gcgatccgaa
    33961 aaaacttttg gacgatttgg gtttgagtgc cgaagcggtg gaacgccggg tgcgcgagtg
    34021 gctgccggac cgtgatgcgg caaattaaac cgcttgaccg cgccgtcgtt atcgggcggc
    34081 gtttttaaac ggcgtttgtt tctgcggttt ttttattgaa accccgcagg cggcaggaag
    34141 ggttcgggcg gcggctttcg ggcggtgctt ggtgtgccgt tgcgcgtttg gaaatttatt
    34201 ccgcttgtcc gtataacggc ggcggtgccg tctgccgata caaggcaaaa tgccgtctga
    34261 aacgcttcag gcggcatttt tcggcgtgag ggttttaggc ttcgacaatt ttgccgcgca
    34321 gggaaaaggt gtaggcttcg gtgatttcca aatcgatcat ttggttgatc atgtcgggcg
    34381 tgccggtaaa gttgacgacg cggttgttgg cggtacgggc ttggagctgg tcggggtctt
    34441 ttttggagat gccttcgacc aggcagcgtt gaaccgtgcc gatcatggtt tggttgatgc
    34501 gggcggtttc ggcttcgatg acttcgttca aggcttcgag gcggcgcact ttttcttcgt
    34561 gcggcgtgtc gtccggcagg ttggcggcag gcgtgccggg gcgcgggctg taaataaaca
    34621 cgaagctcaa gtcgaaggca atgtctttca ccagtttcaa ggtttgctcg aactcgcgtt
    34681 cggtctcgcc ggggaaaccg acgatgaagt cgctgctcag gcacaaatca ggacggatgg
    34741 cgcgcagttt gcggatgatg gatttgtatt ccaaagcggt gtagccgcgt ttcatcgcgc
    34801 tcaatacgcg gtcggaaccg ctttgaatcg gcaggtgcag gtgggaaacc agtttgggca
    34861 ggtcgcggta gcactcgata atcgagtcgg taaactcgcg cgggtggctg gtggtgaagc
    34921 gcatacgttc gatgccgggg atttcgtgga cgatacgcag cagggtggcg aagtcgcaga
    34981 tttcgccgtc gtccatttcg ccgcgatagg cattgacgtt ttgtcccaag aggttgattt
    35041 ctttcacgcc ttgctgggca aggttggcga tttcggccaa tacgtcgttg agcgggcggg
    35101 agaattcttc gccgcgcgtg taggggacga cgcagaagga gcagtatttg gaacagcctt
    35161 ccataatcga cacaaatgcc gcgccgcctt cgacgcgggc gggcggcagg tggtcgaatt
    35221 tttcgatttc ggggaaggaa atatcgactt gcgacagccc gctggtttct ttgtccacaa
    35281 tcattttggg caggcggtgc agcgtttgcg gaccgaaaac cacgtcaaca taaggcgcgc
    35341 gtttgatgat gttttcgcct tcttgcgagg cgacgcagcc ggcaacgccg atgatgaggc
    35401 cggggttttt ttctttgagc ggacggacgc gccccaagtc ggagaacact ttttcctgtg
    35461 ctttttcgcg cacggaacag gtgttgaaca agatgatgtc ggcttcgtcg gcttgggtaa
    35521 cctgttcgat gccgccgtgt tcttcggcaa ggacggacag cattttttcg ctgtcgtact
    35581 cgttcatctg gcagccgaag gtgcggataa atactttttt catggtttgt gtctttctca
    35641 ggcagccgta atcgcggggc tgatggttgt tggaatgaaa aaatttcaga cggcacgacg
    35701 atgccgtctg aaaatcggtg cggattatag cacgatgtgg gtttgggagg caaaatattg
    35761 ttttaaaata tgaatttaat cggtcggaac ggctgtataa tgtttggctt taatgggagg
    35821 tgtgtatgaa accggttgta tgggcggcat tgctgctgtg tgcgtgtacc agcaatttcg
    35881 gcgacaggga acatcagttc ctgcgttata gtggattaaa tttaaaccag tacagcgttg
    35941 cctcgccttg ccgtactatt tgtactgtct gcggcttcgt cgccttgtcc tgatttttgt
    36001 taatccacta tatcagacgg aagagggaat cgcacaaacg gttgttaaag gcaaaacgac
    36061 ccgggcggag gtagaggcac gtttcgggaa gcgcaaccct ttcggctgtt atgcctatca
    36121 cgaggtcagc ctgccgattt ataatttttt gccgaccaat ttcatctata tgaaatcgga
    36181 gcggcggcat tgggaatggt gcgcggatta cgacggggag ggagtcgtcc gggactaccg
    36241 ctttacacat aaagaggaaa aagacgagcg ttccgtcatc cgggatacgg ttggcgtaat
    36301 ccgcaaagaa gcgggcaaat ccttgtcgca acctgaaaaa tgataaaatg gggctttctg
    36361 cttccaagcc cgaaacctgc cgttcagacg gcatttgagg ataaatatga accgtaacga
    36421 aattttattc gaccgcgcca aagccatcat ccccggcggc gtgaattcgc ccgtgcgcgc
    36481 attcggcagc gtcggcggcg tgccgcgctt catcaaaaaa gccgaaggcg cgtatgtttg
    36541 ggacgaaaac ggcacgcgct acaccgatta tgtcggctct tgggggcctg cgattgtcgg
    36601 acacgcgcat cccgaagtcg tcgaagccgt gcgcgaagct gcgttgggcg gtttgtcgtt
    36661 cggcgcgccc accgaaggcg aaatcgccat tgccgaacaa attgccgaaa ttatgccgtc
    36721 tgtcgaacgg ctgcgcctcg tcagctccgg cacggaagcg acgatgactg ccatccgtct
    36781 ggcacgcggt tttaccggcc gcgacaaaat catcaaattt gaaggctgct accacggcca
    36841 ttccgacagc ctgttggtga aagcaggcag cggtctgctt accttcggca atccttcttc
    36901 cgccggtgtg cctgccgact ttaccaaaca tactttggta ctcgaataca acaacatcgc
    36961 ccaactcgaa gaagcctttg cccaaagcgg cgacgaaatc gcctgcgtga ttgtcgaacc
    37021 cttcgtcggc aatatgaacc tcgtccgccc gaccgaagcc tttgtcaaag ccttgcgcgg
    37081 attgaccgaa aaacacggcg cggtgttgat ttacgacgaa gtgatgaccg gtttccgcgt
    37141 cgcgctcggc ggcgcgcagt cgctgcacgg catcacgccc gacctgacca cgatgggcaa
    37201 agtcatcggc ggcggtatgc cgcttgccgc gttcggcgga cgcaaagaca tcatggaatg
    37261 tatttccccg ttgggcggcg tgtatcaggc aggtacatta tcaggcaacc cgattgccgt
    37321 cgccgccggc ttgaaaacgc tggaaatcat ccagcgcgaa ggcttctatg aaaacctgac
    37381 cgccttgaca caacgccttg ccaacggtat tgccgccgcc aaagcgcacg gtatcgagtt
    37441 tgccgccgac agcgtgggcg gtatgttcgg tctgtatttc gccgcacacg tgccgcgaaa
    37501 ctatgccgat atggcgcgct ccaatatcga cgctttcaaa cgcttcttcc acggcatgct
    37561 cgaccgcggc attgccttcg gcccgtccgc ttatgaagca ggtttcgttt ccgccgcgca
    37621 tacgcccgag ctgattgacg aaacggttgc ggttgcggtt gaagtgttca aggcgatggc
    37681 tgcatgatgt tttgacggac agagtttctc tgttcgattt gtttggcaga ttgaagtaag
    37741 aatgcacacc gccgtcattt ccgcgcaggc gggaatccgg acctttcagt ttctgtaatg
    37801 attgaaaata acggcaagcc cgaccttccg gattcccgcc tgcgcgggaa tgacgggcgt
    37861 gtacattttt gatttcaatc tactgtaaaa atgccgtctg aaa
//
LOCUS       DAXFZM010000011        30775 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.011, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000011 DAXFZM010000000
VERSION     DAXFZM010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 30775)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30775)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30775
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.011"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(117..581)
                     /locus_tag="ACFJAG_000453"
     CDS             complement(117..581)
                     /locus_tag="ACFJAG_000453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979834.1"
                     /translation="MKRFILPVLLSATTALASPIVGTWHCIGTDENIHSDTKVKYLQD
                     GSFRGDAILKIDDDGNILAYRVVGEGKWRFANNALTQSQIKYGEVSRQHSPETLAWLE
                     KSEDARLLESMMYTGLVAQMDKPGKDDVYQLDKSGKLVSEDGTSREACTKVE"
     gene            complement(658..3495)
                     /locus_tag="ACFJAG_000454"
     CDS             complement(658..3495)
                     /locus_tag="ACFJAG_000454"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0004832 - valine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006438 - valyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HFC3979835.1"
                     /translation="MLDKYSPAEIESKHYQNWESQGYFRPDMDLTKPSFSIQLPPPNV
                     TGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVVERQLAAQNVSRH
                     DLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDGVRAETVTEVFVRLY
                     EQGLIYRGKRLVNWDPVLGTAVSDLEVESMEEQGSMWHIRYPLADNPTEAVIVATTRP
                     ETLLGDAAVAVNPEDERYTHLIGKELILPLTGRTIPVIADEYVEKDFGTGCVKITPAH
                     DFNDYEVGKRHDTRLINVFDLEAKVLANAEVFNFKGEAQPGFSLPEKYAGLDRFAARK
                     QMVADLQEQGFLVEIKPHTLMTPKGDRTGSVIEPMLTSQWFVAMSATPNGSEPDNEFK
                     GLSLADKAKKAVDSGAVRFIPENWVNTYNQWMNNIQDWCISRQLWWGHQIPAWYDEAG
                     NVYVARNQAEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAFLPSNV
                     LVTGYEIIFFWVARMIMMTTHFTGKVPFKAVYIHGIVRDHEGKKMSKSEGNVIDPVDL
                     IDGIGLDKLLMKRTTGLRKPETAPKVEEATKKLFPEGIPSMGADALRFTMASYASLGR
                     SVNFDFKRAEGYRNFCNKIWNATNFVLMNTENQDCGYGATAAEPRGHSFPDMWIIGRL
                     NQTIEQVTQAYETYRFDLAAETLYSFVWNDYCDWYLELAKVQLQTGCASRQRATRHTL
                     LRVLEAALRLLHPIIPFITEELWQTVAPMCDAKTADSIMLARFPETDGGEIVQTAFGQ
                     MTVLQDLIGAVRNLRGETGIQPNVKAPLFVESADDLADYLKYLPMMTRLTEARQVAAL
                     PESGDAPVAVCNGARLMLKVEIDKAAETARLSKEAEKLQKALDKLNAKLSKPGYTEKA
                     PAHLVEKDKADLAELEDKMAKVQNQLAKLKD"
     gene            complement(3600..4859)
                     /locus_tag="ACFJAG_000455"
     CDS             complement(3600..4859)
                     /locus_tag="ACFJAG_000455"
                     /EC_number="1.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008718 - D-amino-acid dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA];
                     GO_process: GO:0055130 - D-alanine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-amino acid dehydrogenase"
                     /protein_id="HFC3979836.1"
                     /translation="MKVLVLGAGVAGVSSVWYLAEAGHEVTVIDRTEGVAMETSFANA
                     GQLSYGYTTPWAAPGIPTKALKRLFKSHPPLLFRPDGGLYQIEWLWRMLQNCTATRYQ
                     INKERMVRISEYSREMFRRFEAQTDMNFEGRKKGTLQIFRQTEEVEAAKQDIAVLERY
                     GVPYRRLKPEECAEFEPALARVTAKIVGGLHLPADATGDCRLFTENLYKLCQEKGVRF
                     YFNQTISRIDHNGLRIKAVETETGRFETDAVVCALGCFSRTVLAQLDLNLPIYPVKGY
                     SLTLPVTNSDGAPVSTVLDESYKVAITRFDNRIRVGGMAELSGYETKLPEKRRETLAL
                     VVNDLFPEGGDLSQALSWSGLRPMTPDSTPLIGRTRFENLFLNTGHGTLGWTMSPGSA
                     KLTADIVSGKDTEIRSDDLSLSRYQKL"
     gene            complement(4938..6329)
                     /locus_tag="ACFJAG_000456"
     CDS             complement(4938..6329)
                     /locus_tag="ACFJAG_000456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005283 - amino acid:sodium symporter
                     activity [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine/glycine:cation symporter family protein"
                     /protein_id="HFC3979837.1"
                     /translation="MQVFLDNLKAFFETVSSWVWGSVMLMLLVGTGIVLTVMLKGLQF
                     TMLGYALKQAFVPSKKYEGGAGHEGDISHFAALMTALSATIGTGNIAGVATAVVTGGP
                     GAVFWMWMTAIFGMATKYGEGVLAVKYRVNNSKGEMSGGPMYYIEKGLGKNWKWMAVA
                     FALFGTFASFGIGSSVQSNSVAQAVQTSFGIEPAYTGITLTVLTAVVVLGGIKGIAKA
                     ASFIVPAMAVFYVLGGLSIIVINSDALMPAVKLIFSDAFSAQAVAGGAIGTVIRYGVA
                     RGVFSNEAGMGSAPIAAAAAKTDHPVRQALVSMTGTFLDTIVVCSITGIVLVMGLLGA
                     GGEFVKPELSGAALTTVTFQKMLPGIGGWIVTIGLIFFAYSTILGWCYYGEKCAVYVF
                     GEKFAALYRVGYVSSVMPGTVLSLDLVWLASDTFNGLMALPNLTALLLMAKVIVNETR
                     DFKQKITNGELPH"
     gene            6529..6675
                     /locus_tag="ACFJAG_000457"
     CDS             6529..6675
                     /locus_tag="ACFJAG_000457"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979838.1"
                     /translation="MGMWRAAEIINAADCHTFEIYSGLNLNRYGVASPCRTSCTVCGF
                     VALS"
     gene            complement(6792..7568)
                     /gene="lpxA"
                     /locus_tag="ACFJAG_000458"
     CDS             complement(6792..7568)
                     /gene="lpxA"
                     /locus_tag="ACFJAG_000458"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008780 -
                     acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine
                     O-acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HFC3979839.1"
                     /translation="MTLIHPTAVIDPKAELDSGVKVGAYTVIGPNVRIGANTEIGPHA
                     VINGHTTIGENNRIFQFASLGEIPQDKKYRDEPTKLIIGNGNTIREFTTFNLGTVTGI
                     GETRIGDDNWIMAYCHLAHDCVVGNHTIFANNASLAGHVTVGDYVVLGGYTLVFQFCR
                     IGDYAMTAFAAGVHKDVPPYFMASGYRAEPAGLNSEGMRRNGFTAEQISAVKDVYKTL
                     YHRGIPFEEAKADILRRAETQAELAVFQDFFAQSTRGIIR"
     gene            complement(7611..8291)
                     /locus_tag="ACFJAG_000459"
     CDS             complement(7611..8291)
                     /locus_tag="ACFJAG_000459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Abi family protein"
                     /protein_id="HFC3979840.1"
                     /translation="MERYKNAVRKDKAAELYLLNLSLSRELFHVVSIFEIVLRNKIDI
                     CFRQEFKDRNRLYDSIQPQTNPALKYQGCFLRNGTKESAELIKVALSKIQNNSGGKFD
                     HNQLVAGLGFGFWRYLFAGGKDAQFDAAGKVLMKVFPKKPKSTPSVQYNQKWIFRELS
                     NINNFRNRLAHHEPICFKGAIKDTGYARNIYQSIFELLNYMDVDTASVFSHFSDQVIA
                     VCDEIDKL"
     gene            complement(8498..8947)
                     /gene="fabZ"
                     /locus_tag="ACFJAG_000460"
     CDS             complement(8498..8947)
                     /gene="fabZ"
                     /locus_tag="ACFJAG_000460"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0019171 -
                     (3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HFC3979841.1"
                     /translation="MDVQLPIEAKDIQKLIPHRYPFLQLDRITAFEPMKTLTAIKNVT
                     INEPQFQGHFPDLPVMPGVLIIEAMAQACGTLAILSEGGRKENEFFFFAGIDEARFKR
                     QVIPGDQLVFEVELLTSRRGIGKFNAVAKVDGQVAVEAVIMCAKRVV"
     gene            complement(8983..10026)
                     /gene="lpxD"
                     /locus_tag="ACFJAG_000461"
     CDS             complement(8983..10026)
                     /gene="lpxD"
                     /locus_tag="ACFJAG_000461"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HFC3979842.1"
                     /translation="MIPATCTLSQITARLGGEWRGEDISVTAVRPLADAQAEHISFLA
                     NPKYKAEVHDSSAGAIIVSAKAADGFEGRNLIVADDPYLYFAKVARLFSPVVKARGGI
                     HPTAVVEPGATVPASCEIGANAYIGANTVLGEGCRILANAVVQHDCKLGDEVVLHPNA
                     VVYYGCTLGRHVEIHSGAVIGADGFGLAFAGDSWFKIPQTGAVTLGDDVEIGSNTNID
                     RGAMSDTTVGNGTKIDNQVQIGHNCKIGSHTVIAAKTGISGSVTIGSYCIIGGGVGTV
                     GHIEIADKTTIGGGTSVTHSITESGKHIAGIFPMSEHKEWARNAVYIHRLSEMNKRLK
                     TLEQQLSDSKDTQ"
     gene            complement(10059..10559)
                     /locus_tag="ACFJAG_000462"
     CDS             complement(10059..10559)
                     /locus_tag="ACFJAG_000462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpH family outer membrane protein"
                     /protein_id="HFC3979843.1"
                     /translation="MIRLTRAFAATLIGLCCTTGTHADTFQKIGFINTERIYLESKQA
                     RNIQKTLDGEFSARQDELQKLQREGLDLERQLAGGKLKDAKKAQAEEKWRGLVEAFRK
                     KQAQFEEDYNLRRNEEFASLQQNANRVIVKIAKQEGYDVILQDVIYVNTQYDVTDSVI
                     KEMNAR"
     gene            complement(10625..13003)
                     /gene="bamA"
                     /locus_tag="ACFJAG_000463"
     CDS             complement(10625..13003)
                     /gene="bamA"
                     /locus_tag="ACFJAG_000463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_process: GO:0071709 - membrane assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HFC3979844.1"
                     /translation="MKLKQIASALMMLGISPLAFADFTIQDIRVEGLQRTEPSTVFNY
                     LPVKVGDTYNDTHGSAIIKSLYATGFFDDVRVETADGQLLLTVIERPTIGSLNITGAK
                     MLQNDAIKKNLESFGLAQSQYFNQATLNQAVAGLKEEYLGRGKLNIQITPKVTKLARN
                     RVDIDITIDEGKSAKITDIEFEGNQVYSDRKLMRQMSLTEGGIWTWLTRSDRFDRQKF
                     AQDMEKVTDFYQNNGYFDFRILDTDIQTNEDKTKQTIKITVHEGGRFRWGKVSIEGDT
                     NEVPKVELEKLLTMKPGKWYERQQMTAVLGEIQNRMGSAGYAYSEISVQPLPNAGTKT
                     VDFVLHIEPGRKIYVNEIHITGNNKTRDEVVRRELRQMESAPYDTSKLQRSKERVELL
                     GYFDNVQFDAVPLAGTPDKVDLNMSLTERSTGSLDLSAGWVQDTGLVMSAGVSQDNLF
                     GTGKSAALRASRSKTTLNGSLSFTDPYFTADGVSLGYDIYGKAFDPRKASTSVKQYKT
                     TTAGGGVRMGIPVTEYDRVNFGLAAEHLTVNTYNKAPKRYADFIKQYGKTDGADGSFK
                     GLLYKGTVGWGRNKTDSALWPTRGYLTGVNAEIALPGSKLQYYSATHNQTWFFPLSKT
                     FTLMLGGEVGIAGGYGRTKEIPFFENFYGGGLGSVRGYESGTLGPKVYDEYGEKISYG
                     GNKKANVSAELLFPMPGAKDARTVRLSLFADAGSVWDGRTYTAAENGNNKSVYSENAH
                     KSTFTNELRYSAGGAVTWLSPLGPMKFSYAYPLKKKPEDEIQRFQFQLGTTF"
     gene            complement(13060..14400)
                     /gene="rseP"
                     /locus_tag="ACFJAG_000464"
     CDS             complement(13060..14400)
                     /gene="rseP"
                     /locus_tag="ACFJAG_000464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HFC3979845.1"
                     /translation="MQTLLAFIFAILILVSLHEFGHYIVARLCGVKVVRFSVGFGKPF
                     FTRKRGDTEWCLAPIPLGGYVKMVDTREGEVSEADLPYAFDKQHPAKRIAIVAAGPLT
                     NLALAVLLYGLSFSFGVTELRPYVGTVEPDTIAARTGFQSGDKIQSVNGVSVQDWSSA
                     QTEIVLNLEAGKVAVGVQTASGAQTVRTIDAAGTPEAGKIAKNQGYIGLMPFKITTVA
                     GGVEKGSPAEKAGLKPGDRLTAADGKPIASWQEWANLTRQSPGKKITLTYERAGQTHT
                     ADIRPDTVEQPDHTLIGRVGLRPQPDRAWDAQIRRSYRPSVVRAFGMGWEKTVSHSWT
                     TLKFFGKLISGNASVSHISGPLTIADIAGQSAELGLQSYLEFLALVSISLGVLNLLPV
                     PVLDGGHLVFYTVEWIRGKPLGERVQNIGLRFGLALMMLMMAAAFFNDVTRLIG"
     gene            complement(14435..15670)
                     /gene="ispC"
                     /locus_tag="ACFJAG_000465"
     CDS             complement(14435..15670)
                     /gene="ispC"
                     /locus_tag="ACFJAG_000465"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0030604 - 1-deoxy-D-xylulose-5-phosphate
                     reductoisomerase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070402 - NADPH binding [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HFC3979846.1"
                     /translation="MPSENASDGIRYKVILIMTPQVLTILGSTGSIGESTLDVVSRHP
                     EKFRVFALAGHKQVEKLAAQCQTFRPEYAVVADAEHAARLEALLKRDGTATQVLHGAQ
                     ALVDVASADEVSGVMCAIVGAAGLPSALAAAQKGKTIYLANKETLVVSGALFMETARA
                     NGAAVLPVDSEHNAIFQVLPRDYTDRLNEHGIDSIILTASGGPFLTTDLSTFDSITPE
                     QAVKHPNWRMGRKISVDSATMANKGLELIEAHWLFNCPPDKLEVVIHPQSVIHSMVRY
                     RDGSVLAQLGNPDMRTPIAYCLGLPERIDSGVGKLDFGALSALTFQKPDFGRFPCLKF
                     AYETINAGGAAPCVLNAANETAVAAFLDGQIKFTDIAKTVAHCLAQDFSNGMGDIEGL
                     LAQDARTRAQARAFIGTLR"
     gene            complement(15675..16472)
                     /locus_tag="ACFJAG_000466"
     CDS             complement(15675..16472)
                     /locus_tag="ACFJAG_000466"
                     /EC_number="2.7.7.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004605 - phosphatidate
                     cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0016024 - CDP-diacylglycerol biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HFC3979847.1"
                     /translation="MLKQRVITAMWLLPLMLGMLFYAPQWLWAAFCGLIALTALWEYA
                     RMAGLCKTETNHYLAATLVFGVVAYAGGWMLPNLVWYVVLAFWLAVMPLWLRFKWRLN
                     GGWQVYAVGWLLLMPFWFALVSLRPHPDDALPLLAVMGLVWVADVCAYFSGKALGKHK
                     IAPAISPGKSWEGAIGGAVCVAVYMTAVRSAGWLAFDTGWFDTVLIGLVLTVVSVCGD
                     LLESWLKRAAGIKDSSNLLPGHGGVFDRTDSLIAVISVYAAIMSVLN"
     gene            complement(16475..17221)
                     /locus_tag="ACFJAG_000467"
     CDS             complement(16475..17221)
                     /locus_tag="ACFJAG_000467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenyl transferase"
                     /protein_id="HFC3979848.1"
                     /translation="MKSSTQTILEHTAIPRHIAVIMDGNGRWAKKRFLPRIMGHKRGL
                     DALENMVKHCAKLGVQYLTVFAFSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNM
                     RLKILGSRERFNRQILQGIEEAEALTANNTGLTLSIAADYGGRWDILQAANKLIAEGV
                     SEITEDTLAKHLMLGDAPEPDLFIRTGGETRISNFLLWQMAYAELYFTDILWPDFDET
                     ALDAAVASFQKRERRFGRTSEQLPIGQQRN"
     gene            complement(17277..17834)
                     /gene="frr"
                     /locus_tag="ACFJAG_000468"
     CDS             complement(17277..17834)
                     /gene="frr"
                     /locus_tag="ACFJAG_000468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008135 - translation factor activity, RNA
                     binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HFC3979849.1"
                     /translation="MINDIQKTAEGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEY
                     WGSMVPVSQVANVTLLDARTIGVKPFEGNMAAKVEKAIRDSNLGLNPAAVGDLIRVPM
                     PMLTEERRKDLIKVVRGEAEEGRVSIRNVRRDANDHIKKLLKDKEISEDEARRGEEAV
                     QKLTDKYIAEADKVLAAKEEDLMAV"
     gene            complement(17976..18968)
                     /locus_tag="ACFJAG_000469"
     CDS             complement(17976..18968)
                     /locus_tag="ACFJAG_000469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HFC3979850.1"
                     /translation="MKIISLFSGCGGLDLGFEKAGFEIPAANEYDKTIWATFKANHPK
                     THLIEGDIRKIKEEDFPEEIDGIIGGPPCQSWSEAGALRGIDDARGQLFFDYIRILKS
                     KQPKFFLAENVSGMLANRHNGAVQNLLKMFDGCGYDVTLTMANAKDYGVAQERKRVFY
                     IGFRKDLEIKFSFPKGSTVEDKDKITLKDVIWDLQDTAVPSAPQNKTNPDAVNNNEYF
                     TGSFSPIFMSRNRVKAWDEQGFTVQASGRQCQLHPQAPKMEKHGANDYRFAAGKETLY
                     RRMTVREVARIQGFPDNFKFIYQNVNDAYKMIGNAVPVNLAYEIAAAIKKTLER"
     gene            complement(18973..19809)
                     /locus_tag="ACFJAG_000470"
     CDS             complement(18973..19809)
                     /locus_tag="ACFJAG_000470"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0009036 - type II site-specific
                     deoxyribonuclease activity [Evidence IEA];
                     GO_process: GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NgoPII family restriction endonuclease"
                     /protein_id="HFC3979851.1"
                     /translation="MNIIDAIINLANNPVVGVESHSQSNNRANQAGDALEEYVKDLFS
                     GSFNLNETQRIARHAKVFSYLGNNSNPPDAMLRNGDAIEVKKIESKDSALALNSSHPK
                     SKLSVDDSMLTKACKDAEKWEEKDIIYIVGVVDKKKNLKHLAMVYGIDYCADAECYLK
                     IKNQIKEGIGNIGGIQFAETKELGRVNRIDPLNITYLRVRGMWGIENPWFVFNYIYQR
                     NMEKSFNFMAIINEDKWNSFNNTDKLLAIQDSKLAISDIKIKNPNNPARLRNAKLITY
                     HL"
     gene            complement(19918..21045)
                     /locus_tag="ACFJAG_000471"
     CDS             complement(19918..21045)
                     /locus_tag="ACFJAG_000471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HFC3979852.1"
                     /translation="MNSSQRKRLSGRWLNSYERYRHRRLIHAVRLGGAVLFATALARL
                     LHLQHGEWIGMTVFVVLGMLQFQGAIYSKAVERMLGTVIGLGAGLGVLWLNQHYFHGN
                     LLFYLTIGTASALAGWAAVGKNGYVPMLAGLTMCMLIGDNGSEWLDSGLMRAMNVLIG
                     AAIAIAAAKLLPLKSTLMWRFMLADNLADCSKMIAEISNGRRMTRERLEQNMVKMRQI
                     NARMVKSRSHLAATSGESRISPSMMEAMQHAHRKIVNTTELLLTTAAKLQSPKLNGSE
                     IRLLDRHFTLLQTDLQQTAALINGRHARRIRIDTAINPELEALAEHLHYQWQGFLWLS
                     TNMRQEISALVILLQRTRRKWLDAHERQHLRQSLLETREHG"
     gene            complement(21115..21190)
                     /locus_tag="ACFJAG_000472"
     tRNA            complement(21115..21190)
                     /locus_tag="ACFJAG_000472"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(21155..21157),aa:Thr,seq:cgt)
     gene            21297..21776
                     /locus_tag="ACFJAG_000473"
     CDS             21297..21776
                     /locus_tag="ACFJAG_000473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979853.1"
                     /translation="MFVNEKYPYATLFAGLVFLTLPFALAVHDAFACAFGRAGLLVSV
                     SDGGFGRRGGWDGTVWFVFGVFAFLNVVVSAGLTKLAYKKMMRRHSRYALFLSGVAAC
                     AAVAWIFKLLLGSAALGGLSGEAVSEYAFAVWLVSMLTLPKRLTRAPVQPVVFHRKK"
     gene            21871..22494
                     /gene="rsmG"
                     /locus_tag="ACFJAG_000474"
     CDS             21871..22494
                     /gene="rsmG"
                     /locus_tag="ACFJAG_000474"
                     /EC_number="2.1.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA];
                     GO_process: GO:0046118 - 7-methylguanosine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HFC3979854.1"
                     /translation="MERKERLRAGIAAMGPDISETAQDRLLAYVDLLKKWNKTYNLTA
                     LRDEEKMIVHHLLDSLTLLPYIEGAQTMLDVGSGGGQPGIPAAVCRPDVQITLLDANT
                     KKTAFLRQAAIELGLDNVRVVSGRVEAVSDVRADVVTSRAFAELADFVSWTAHLLKDG
                     GYWAAMKGVYPQGEIGRLPQDVCVEKVQRLDVPGLDAERHIVILSKR"
     gene            22594..23367
                     /locus_tag="ACFJAG_000475"
     CDS             22594..23367
                     /locus_tag="ACFJAG_000475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HFC3979855.1"
                     /translation="MSANILAIANQKGGVGKTTTTVNLAASLASRGKRVLVVDLDPQG
                     NATTGSGIDKAGLQSGVYQVLLGDADVQSAAVRSKEGGYAVLGANRALAGAEIELVQE
                     IAREVRLKNALKAVAEDYDFILIDCPPSLTLLTLNGLVAAGGVIVPMLCEYYALEGIS
                     DLIATVRKIRQAVNPDLDITGIVRTMYDSRSRLVAEVSEQLRSHFGDLLFETAIPRNI
                     RLAEAPSHGMPVMAYDAQAKGAKAYLALADELAARVSGK"
     gene            complement(24113..24697)
                     /gene="rnhB"
                     /locus_tag="ACFJAG_000476"
     CDS             complement(24113..24697)
                     /gene="rnhB"
                     /locus_tag="ACFJAG_000476"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HFC3979856.1"
                     /translation="MHILTAGVDEAGRGPLVGSVFAAAVILPETFDLPGLTDSKKLSE
                     KKRDALAEMIKEQAVAWHVAASTPEEIASLNILHATMLAMKRAVYGLAARPEKIFIDG
                     NRIPEHLGIPAEAVVKGDSKIIEISAASVLAKTARDAEMYALAQRRPQYGFDKHKGYG
                     TKQHLEALKQYGVLPEHRRDFAPVRNLLAQQALF"
     gene            complement(24765..26660)
                     /gene="mnmG"
                     /locus_tag="ACFJAG_000477"
     CDS             complement(24765..26660)
                     /gene="mnmG"
                     /locus_tag="ACFJAG_000477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0002098 - tRNA wobble uridine modification
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HFC3979857.1"
                     /translation="MTHMIYPKTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIET
                     LGQMSCNPSIGGIGKGHLVRELDALGGAMALATDKSGIQFRRLNASKGAAVRATRSQA
                     DRILYKASIREMLENQENLDLFQQAVEDVTLEGERISGVITAMGAEFKARAVVLTAGT
                     FLSGKIHIGLENYEGGRAGDPAAKSLGGRLRELKLPQGRLKTGTPPRIDGRTIDFSQL
                     TEQPGDTPVPVMSVRGNAEMHPHQVSCWITHTNTQTHDIIRSGFDRSPMFTGKIEGVG
                     PRYCPSIEDKINRFADKDSHQIFLEPEGLTTHEYYPNGISTSLPFDIQIALVRSMKGL
                     ENAHILRPGYAIEYDYFDPRNLKASLETKTIEGLFFAGQINGTTGYEEAAAQGLLAGA
                     NAVQYVRGQDPLLLRREQAYLGVLVDDLITKGLNEPYRMFTSRAEYRLQLREDNADMR
                     LTEDGYKIGLVGEAQWRMFNEKREAVEREIQRLKTTWYTPQKLAEDEQIRVFGQKLSR
                     EANLHDLLRRPNLDYAALMTLEGAMPSENLSAEVIEQVEIQVKYQGYIDRQNEEIDSR
                     RDIETLKLPDGIDYGRVKGLSAEVQQKLNQHKPETVGQASRISGVTPAAVALLMVHLK
                     RGFKDAK"
     gene            complement(26833..28260)
                     /locus_tag="ACFJAG_000478"
     CDS             complement(26833..28260)
                     /locus_tag="ACFJAG_000478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005283 - amino acid:sodium symporter
                     activity [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine/glycine:cation symporter family protein"
                     /protein_id="HFC3979858.1"
                     /translation="MNENFTEWLHGWVGAINDPMWSYLVYMLLGTGLFFTVTTGFVQF
                     RLFGRSIKEMLGGRKQGDDPHGITPFQAFVTGLASRVGVGNIAGVAIAIKVGGPGAVF
                     WMWVTALIGMSSAFVESSLAQLFKVRDCDNHHFRGGPAYYITHGLGQKWLGVLFALSL
                     IFCFGFVFEAVQTNTIADTVKAAWGWEPHYVGVALVILTAPIIFGGIRRISKAAEIVV
                     PLMAVLYLFIALFIILTNIPMIPDVFGQIFSGAFKFDAAAGGLLGGLISQTMMMGIKR
                     GLYSNEAGMGSAPNAAAAAEVKHPVSQGMIQMLGVFVDTIIVCSCTAFIILIYQQPYG
                     DLSGAALTQAAIVSQVGQWGAGFLAVILFMFAFSTVIGNYAYAESNVQFIKSHWLITA
                     VFRMLVLAWVYFGAVANVPLVWDMADMAMGIMAWINLVAILLLSPLAFMLLRDYTAKL
                     KMGKDPEFKLSEHPGLKRRIKSDVW"
     gene            28419..29411
                     /gene="pdxA"
                     /locus_tag="ACFJAG_000479"
     CDS             28419..29411
                     /gene="pdxA"
                     /locus_tag="ACFJAG_000479"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050570 - 4-hydroxythreonine-4-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HFC3979859.1"
                     /translation="MKQPVFAVTSGEPAGIGPDICLDLAFARLPCRCAVLGDKHLLRA
                     RAEALGKSVVLRDFDPESGGAHGEGGLEVLHIPAAEAVEAGWLNPANAAYVLQLLDTA
                     LAGISDGIFDGIVTAPLHKGIINAARASTGFFSGHTEYLAEKSGTGQVVMMLAGKGLR
                     VALVTTHLPLKDVAAAITQPLIESVARILHHDLKHKFGIKNPKILVAGLNPHAGEGGH
                     LGHEETDTIIPALENLRREGINLAGPYPADTLFQPFMLEGADAVLAMYHDQGLPVLKY
                     HSFGQGVNITLGLPFIRTSVDHGTALDLAATGRADSGSLITAVETAVEMARGSL"
     gene            complement(29641..>30775)
                     /locus_tag="ACFJAG_000480"
     CDS             complement(29641..>30775)
                     /locus_tag="ACFJAG_000480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ribonuclease E"
                     /protein_id="HFC3979860.1"
                     /translation="KKTSWWDSFKAWLKRIFGGSETQAVPAAETSEKRSTANRSGSRA
                     NNRRQNPRRSKREGSKIEVREAAGKTAGQKARADKAETRNNGNRRRNERGDRATERAN
                     EAEIQSRNVQPAAPVADAAPPETEGQTGKRRRNGSRNERGQTAPETAAVAETAVQTAE
                     NTPPEPYTAEDKGSKPKSERNRRERDSRDAKERRERNNQRDRRQNGKKRNIPSAAKIE
                     QYLNIHDTADKVRSAAAHVFGETDANAPITVSIADPLIATPVQTASSAVSNGDALIYD
                     AAEKIRRAAADILPEGAAPKAAAQEMPSETATFTAAAEQARETAQTGGLVLIETDPAA
                     LKAWAAQPEVQAGRGLRRSEQPKPSEAATVPAEEMIQVETRQG"
BASE COUNT         6137 a         7835 c         9094 g         7709 t
ORIGIN      
        1 gaatgcccgg atgcgtgatt attttgccgc aaacgatacc gccgaaaacg gtattcggac
       61 ggcttgattt gagttttggt atttttgccc gacggggtgg aaaatacagt tgcttttcac
      121 tccactttcg tacatgcctc acgggaagtt ccgtcttcgg acactaattt gcctgattta
      181 tccagttgat acacatcatc ttttccgggt ttgtccatct gcgcgaccaa tccggtgtac
      241 atcatgcttt ccaagagtcg tgcatcctcc gacttttcta accacgccag cgtttcgggg
      301 ctgtgctgtc gtgaaacttc accgtacttg atttggcttt gagttaaggc attgttcgca
      361 aaacgccatt taccttcacc gacaacacgg tatgccaaga tattgccgtc atcatcgatt
      421 ttgagtatag catcgccacg gaagctgccg tcctgaagat atttgacttt tgtatcactg
      481 tgaatgtttt catcagtgcc gatgcaatgc catgtaccga caatcggaga agccaaggcg
      541 gttgttgcgg ataaaagcac cggcagaata aagcgtttca tctatttcct tttttaaagg
      601 aggccgtctg aaaaccccgg tttcaggttt tcagacggcc ttgtctattc aatcaaatca
      661 gtctttcaac ttcgccaact gattttgcac ttttgccatt ttgtcttcca attccgccaa
      721 atcggctttg tctttttcca ccagatgcgc cggggctttt tcggtgtagc cgggtttgga
      781 gagtttggca ttgagtttgt ccaaggcttt ttgcagcttc tcggcttctt tgctcaaacg
      841 ggcggtttcg gcggctttgt cgatttcgac tttcagcatc aggcgcgcgc cgttgcagac
      901 ggcgacgggc gcgtctccgc tttcgggcag ggcggcgact tgccgtgctt cggtcaggcg
      961 ggtcatcatc ggcaggtatt tgaggtagtc cgccaagtcg tccgcgcttt cgacaaacag
     1021 cggggctttc acgttgggct ggatgcccgt ttcgccgcgc aggttgcgga ctgcgccgat
     1081 caaatcctgc aacacggtca tttgcccgaa tgccgtctga acaatctcgc cgccgtcggt
     1141 ttcggggaag cgggcgagca tgatgctgtc ggcggttttg gcatcgcaca tgggggcgac
     1201 ggtttgccac agttcttcgg tgatgaacgg gataatcggg tgcagcaggc gcagggcggc
     1261 ttcgagtacg cgcaataagg tatggcgtgt ggcgcgctgg cggctggcgc agccggtttg
     1321 gagctgcact ttggcgagtt ccagatacca gtcgcaataa tcgttccata cgaagctgta
     1381 cagggtttcc gccgccaaat caaagcggta ggtttcgtag gcttgcgtaa cctgctcgat
     1441 ggtctgattc agacgaccta tgatccacat atcggggaag gaatggccgc gcggttcggc
     1501 agcggttgcg ccgtagccgc agtcttggtt ttcggtgttc atcaagacga agttggtggc
     1561 gttccagatt ttgttgcaga agttgcggta gccttcggcg cgtttgaagt cgaagttaac
     1621 cgaacggccc aagctggcgt agctcgccat ggtgaagcgc aatgcgtccg cgcccatgct
     1681 ggggatacct tcggggaaga gttttttcgt ggcttcttcc actttcggcg cggtttcggg
     1741 tttgcgcagg ccggtcgtac gtttcatcag cagcttgtcc aagccgatac catcgatcaa
     1801 atccacaggg tcgatgacgt tgccttcgga tttggacatt tttttgcctt cgtggtcgcg
     1861 cacgatgccg tggatgtaca cggctttaaa cggtactttg ccggtgaagt gggtggtcat
     1921 cataatcatg cgcgccaccc agaagaagat gatttcatat ccggtaacca agacgttgga
     1981 cggcaggaag gctttgagct cgtcggtttc agacggccag ccgagcgtgg agaacggcac
     2041 gagcgcggag gagaaccatg tgtccaatac gtcttcttcg cgggtcaaac ctgttttgcc
     2101 ggcttgtttt tcggcttcag cctgattgcg ggcgacgtaa acattacctg cttcgtcgta
     2161 ccacgcgggg atttgatgcc cccaccacag ttggcgcgaa atacaccagt cttggatgtt
     2221 gttcatccat tggttgtagg tattgaccca gttttcaggg ataaagcgca ccgcgccgct
     2281 gtcgacggct tttttggctt tgtcggcaag gctcaagcct ttgaattcgt tgtcaggctc
     2341 gctgccgttc ggtgtggcgg acatggcgac aaaccattgg ctggtcagca tcggctcaat
     2401 cactgaacct gtgcggtcgc ctttcggcgt catcagcgtg tgcggtttga tttcgaccaa
     2461 gaagccttgc tcctgcaaat cggcaaccat ttgtttgcgc gcggcaaagc ggtccaagcc
     2521 tgcgtatttt tcaggcaggg aaaagcctgg ttgcgcttcg cctttgaagt tgaacacttc
     2581 ggcgtttgcc agcactttgg cttctaagtc gaacacgtta atcaggcgcg tgtcgtggcg
     2641 tttgccgact tcgtaatcgt tgaaatcgtg cgcaggcgtg attttcacgc aaccggtacc
     2701 gaagtctttt tcaacgtatt cgtcggcgat aaccggaatg gtgcgaccgg tcagcggcag
     2761 gattaattct ttgccgatta agtgggtgta acgttcatct tctggattga cggcaacggc
     2821 cgcgtcgccc agcaacgttt caggacgggt ggtcgccacg ataacggctt cggtgggatt
     2881 gtcggccagc ggatagcgga tgtgccacat agagccttgt tcttccatgc tttccacttc
     2941 caaatccgat accgccgtgc caagcacggg atcccagttc accaagcgtt tgccgcggta
     3001 aatcaagccc tgttcataca ggcgcacgaa cacttcggtc acggtttcgg cgcgtacgcc
     3061 gtccatcgtg aaatactcgc gcgtccagtc ggcggagcag cccacgcggc gcatttgctg
     3121 ggtaatcgtg ccgccggaaa cttctttcca ttcccacact ttttccaaga atttttcgcg
     3181 gcccaagtca tgacgggaca cgttttgcgc ggcaagctga cgctcgacca cgatttgcgt
     3241 ggcgatgccc gcgtggtcgg taccgggaat ccaggcggtg ttgcagcctt tcatgcggta
     3301 gtagcgggtc aggccgtcca tgatggtttg gttgaaggca tgacccatgt gcagcgtgcc
     3361 ggttacgttg ggcggcggca gttggatgga aaaagacggt ttggtcaaat ccatatcggg
     3421 ccggaaatag ccttggcttt cccagttttg atagtgtttg gattcgattt cggcggggga
     3481 gtatttgtct aacatatgaa gccctgagaa ataagatgat ttgatggttt gaattatagc
     3541 gcaaatgccg tctgaaacgc tttcggggtt tcagacggcc ttaaatttaa atattgcctt
     3601 tacagttttt gatagcgcga caggctcaaa tcgtcgctgc ggatttcggt gtctttgccg
     3661 ctcacgatat cggcggtcaa ttttgccgaa cccggcgaca tggtccagcc caaagtaccg
     3721 tgcccggtat tcagaaacag gttttcaaag cgggtgcgcc cgattaacgg cgtactgtcg
     3781 ggcgtcatcg gcctgaggcc gctccaggac aatgcttggc tcaaatcgcc gccttccggg
     3841 aacaagtcgt tgacgaccaa agccaaggtt tcgcggcgtt tttcgggcag tttggtttcg
     3901 tagccggaca attccgccat tccgccgacg cggattctgt tgtcaaaacg cgtgatggcg
     3961 actttgtagc tttcatctaa aacagtggac accggtgcgc cgtcggaatt tgtgaccggc
     4021 agggtcaagg aatagccttt gacgggataa atgggcagat tgagatccaa ctgcgccaac
     4081 acagtcctgc tgaagcagcc gagcgcgcag acaacggcat ctgtttcaaa ccgccctgtt
     4141 tcggtttcaa cggctttgat gcgcagcccg ttgtggtcga tgcggctgat ggtttggttg
     4201 aagtagaacc gtacgccctt ctcttgacac aatttgtaca ggttttcggt aaagaggcgg
     4261 cagtcgccgg tcgcatccgc aggcaggtgc agaccgccga caattttggc ggtaacgcgt
     4321 gccagcgcag gctcgaattc tgcgcattct tcgggcttca gacggcggta cggcacgccg
     4381 tagcgttcca aaacggcaat gtcttgtttt gccgcttcga cttcttcggt ttggcggaaa
     4441 atctgcaacg tccctttttt gcgtccctca aaattcatgt cggtttgcgc ttcaaaacgg
     4501 cggaacattt cacggctgta ttcggaaatc ctgaccatgc gctctttatt gatttgatag
     4561 cgcgttgccg tgcagttttg cagcatccgc cacagccatt cgatttgata caggccgccg
     4621 tcagggcgga acagtaaagg cggatggctt ttaaacagcc gtttcagtgc tttggtcgga
     4681 ataccgggtg cagcccaagg cgtggtatag ccgtaagaaa gctggcctgc attggcaaaa
     4741 ctggtttcca tcgccacacc ctcggtgcgg tcgatgaccg ttacttcatg tccggcctct
     4801 gccagatacc acacggagga tacgccggca acacccgcac ctaaaacaag cactttcatg
     4861 tttccccctc cggctttttc aaaacaggct taatatgccg tgccgtctga atattcggat
     4921 tcagacggtc tcggatatta atgcggcaat tcgccgtttg tgattttttg tttgaagtcg
     4981 cgtgtttcat tgacgatgac tttcgccatc aacaaaagcg cagtcaggtt gggcaatgcc
     5041 atcaagccgt tgaatgtatc cgaagccagc cataccaaat caaggctcaa cacggtaccc
     5101 ggcatgacgg aagaaacata accgacgcgg tacaaagcgg caaacttctc gccgaagacg
     5161 taaaccgcgc atttctcgcc gtaataacac cagccgagaa tggttgagta ggcaaagaaa
     5221 atcaggccga tggtcacaat ccagccgccg atgccgggca gcattttttg gaaagtgacg
     5281 gttgtcagcg ccgcgccgct caattcaggt ttcacaaact cgccgcctgc gccgagcaga
     5341 cccatgacca acacgatacc ggtaatcgag cagacaacaa tggtgtccaa aaaagtaccg
     5401 gtcatggaaa ccaaagcctg acgaacgggg tggtcggttt tcgcggctgc ggcggcaata
     5461 ggcgcagaac ccatacccgc ctcattggag aacacgccgc gcgccacgcc gtagcggatg
     5521 accgtaccga tagcgccgcc tgctacggcc tgcgcgctga acgcatcgga gaaaatcagc
     5581 ttgacggcag gcatcagtgc atcggaatta atgacgataa tggaaagacc gcccaacaca
     5641 taaaacaccg ccatagcagg cacgatgaaa gaagcggctt tggcgatgcc tttaatacca
     5701 cctaaaacga caacggcagt cagaacggtc aacgtaatgc cggtataggc aggttcgata
     5761 ccgaagctgg tttgcacagc ctgtgcaacc gagttggact gcaccgagct gccgataccg
     5821 aaggaagcga atgtgccgaa cagcgcaaat gcaacggcca tccatttcca gtttttgccc
     5881 aagccttttt cgatgtaata catcgggccg ccggacattt cgcctttgga attgttgacg
     5941 cggtatttca ccgccaacac gccttcgccg tatttggtgg ccatgccgaa aatagcggtc
     6001 atccacatcc aaaataccgc gcccgggccg ccggttacca ctgcagtcgc cacgccggcg
     6061 atgttacccg taccgatggt ggcggacagc gcggtcatca acgccgcaaa atgggaaata
     6121 tcgccttcgt ggcctgcgcc gccttcatac ttctttgacg gcacaaacgc ctgtttcagc
     6181 gcatagccca acatagtgaa ctgcaagcct ttcagcataa cggtcagcac aatgccggtg
     6241 ccgaccagca gcatcaacat aacagatccc caaacccagc tgctgacggt ttcgaaaaag
     6301 gctttgagat tgtctaaaaa tacttgcatg gctttctcct ttgtctgttt tatttttaaa
     6361 acaccacttt tgtagtgtcc ggtaatttca gcacagaata ttcaataaga caatatgttc
     6421 ttttgaaaaa tacttttggt tttttcaccg aagacaggcc ggttcaagct gcggaaattg
     6481 tttgcaatta tttaaaagca gaggcggagg tcacaatgaa atgtccgaat ggggatgtgg
     6541 cgggcggcag aaatcatcaa tgctgccgac tgccatactt ttgaaatcta tagtggttta
     6601 aatttaaacc ggtacggcgt tgcctcgcct tgccgtactt cttgtactgt ctgcggcttc
     6661 gtcgccttgt cctgatttaa atttaaacca ctatacaaaa tgatgcatcg atcaaacaac
     6721 ataccgcttt aaaaaaaacc gatgccgtct gaaacgcttt cggggtttca gacggcattg
     6781 aaagggtgcg gtcagcggat gatgccgcgc gtcgattgtg cgaagaagtc ttgaaatacg
     6841 gcaagctcgg cttgggtttc ggcgcggcgg agaatgtccg ccttggcttc ttcaaacgga
     6901 atgccgcgat ggtagagggt tttgtatacg tctttgacgg cggaaatctg ttctgcggta
     6961 aaaccgttgc ggcgcatacc ttcgctgttt aggccggccg gttcggcgcg gtagcccgat
     7021 gccataaagt agggcggcac gtctttgtgt acgcctgcgg cgaaggcggt catggcgtag
     7081 tcgccgatgc ggcagaattg gaagaccagc gtgtagccgc ccaaaacgac gtagtcgccg
     7141 acggtaacgt gtccggcaag cgaggcgttg ttggcgaaaa tggtgtggtt gccgaccacg
     7201 cagtcgtgcg cgaggtggca gtacgccata atccagttgt cgtcgccgat acgggtttcg
     7261 ccgatgccgg ttaccgtgcc taaattaaag gtggtgaatt cgcggatggt gttgccgttg
     7321 ccgataatca gcttggtcgg ctcgtcgcgg tattttttgt cctgcggaat ttcgccgagg
     7381 ctggcaaatt ggaaaatgcg gttgttttcg ccgatggtgg tgtggccgtt gatgacggcg
     7441 tgcggaccga tttctgtatt cgcaccgatt cggacgttgg ggccgatgac ggtgtacgcg
     7501 ccgactttga cgccggagtc gagttcggct ttggggtcga tgacggcggt cgggtggatg
     7561 agggtcatgt tttgaatact ccgctgcttg ttaagacaaa taatagaaaa tcacagtttg
     7621 tcgatttcat cgcagaccgc aatcacttga tcgctaaaat ggctaaatac tgaagcagta
     7681 tctacatcca tgtaattaag cagttcaaaa atagattggt aaatatttct agcgtagccg
     7741 gtatctttta ttgcaccttt aaaacaaatc ggttcgtgat gtgccaaacg attacggaaa
     7801 ttgttaatat tggaaagttc tcgaaaaatc catttttggt tatattgcac acttggtgta
     7861 gatttgggct tttttggaaa aactttcatc aatacttttc ctgcagcatc aaattgagca
     7921 tctttccctc ccgcaaacag ataccgccaa aaaccgaatc ctagtcctgc aaccaattgg
     7981 ttgtggtcaa actttcctcc gctattattt tgtattttag ataatgcaac cttgattaat
     8041 tcagcagatt ctttcgtacc atttcttaaa aagcaacctt gatatttcaa tgcaggattc
     8101 gtttgtggtt gtatgctatc atataaccgg tttctgtctt taaactcctg ccgaaagcaa
     8161 atatcaattt tgtttcttaa aacgatctca aatatagaaa caacatgaaa aagttctctt
     8221 gataaagata aattcaataa atacaattca gctgctttgt ctttcctaac ggcattttta
     8281 taccgttcca ttctgaaatc agaaaaaata ctacagcatt ccttataatt cacgctaacc
     8341 cttgattctt tatttttaaa ttgacgtttc aaactatatt tgatatagtt agataaaact
     8401 aatccccacc gtgtccctgg gtttgaataa acctaaaccg gtgggttttc tttttattag
     8461 gtcgtctgaa actttcagac gacctttttc cgaacgctca aaccacgcgt ttggcgcaca
     8521 taatcacggc ttcgacggcg acttgtccgt ccactttggc aacggcgttg aatttgccga
     8581 tgccgcgccg gctggtcagg agttcgactt caaagacgag ttggtcgccg gggatgactt
     8641 ggcgtttgaa acgggcttcg tctatgccgg cgaagaagaa aaattcgttt tccttgcgcc
     8701 cgccttcgct caaaatcgcc aacgtgccgc acgcctgcgc catcgcttcg atgatgagta
     8761 cgccgggcat aacgggcagg tcggggaaat ggccttggaa ttggggttcg tttatggtta
     8821 cgtttttgat ggcggtcagg gttttcatcg gctcgaaggc ggtgatgcgg tcgagctgga
     8881 gaaacgggta gcggtggggg atgagttttt ggatgtcttt ggcttcgatg gggagttgta
     8941 cgtccatgtc tgtcgtattc cttgaataaa gtcggtttgg atttattgcg tgtctttgct
     9001 gtctgaaagc tgctgttcca gcgttttgag gcgtttgttc atttcgctta agcggtggat
     9061 gtaaacggcg ttgcgtgccc attctttatg ctcggacatc gggaagatgc cggcgatgtg
     9121 tttgccgctt tcggtaatgc tgtgggtgac ggacgtgccg ccgccgatgg tggttttgtc
     9181 ggcgatttcg atgtgtccga ccgtaccgac gccgccgccg atgatgcagt agctgcctat
     9241 ggttacgctg cctgagatgc cggttttggc ggcgatgacg gtgtgcgaac cgattttgca
     9301 gttgtgtccg atttggactt ggttgtcgat tttggtgccg ttgccgacgg tggtgtcgct
     9361 catcgcgccg cggtcgatgt tggtgttcga gccgatttct acgtcgtcgc ccagcgttac
     9421 cgcgccggtt tgcgggattt tgaaccacga atcgccggcg aaggcgagtc cgaaaccgtc
     9481 cgcgccgatg accgcgccgc tgtggatttc gacgtgtctg ccgagtgtgc agccgtaata
     9541 aacgacggcg ttgggatgca ggacgacttc gtcgcccagt ttgcaatcgt gttggacgac
     9601 ggcgtttgcc aagatgcggc agccttcgcc gagcacggtg ttcgcgccga tgtaggcgtt
     9661 cgcgccgatt tcacagcttg cgggaacggt cgcgcccggt tcgacgacgg cggtcggatg
     9721 gatgccgccg cgcgctttga cgacgggtga aaacaggcgc gcgactttgg cgaaatagag
     9781 atagggatcg tcggcgacaa tcaggttgcg cccttcaaat ccgtctgctg ctttggcgga
     9841 aacgatgatc gcgcccgcgc tgctgtcgtg gacttcggct ttgtatttcg gattggcgag
     9901 gaagctgatg tgttccgcct gcgcgtctgc gagcgggcgc acggcggtaa cggaaatgtc
     9961 ctcgccgcgc cattcgccgc cgagccgcgc ggtgatttgg gacagggtgc aggtggccgg
    10021 aatcatggtt ttcctgtttg gtatgccgtc tgaaagggtt agcgggcgtt catttcttta
    10081 atgacgctgt cggtaacgtc gtattgggtg ttgacgtaaa tcacgtcctg caaaatgaca
    10141 tcgtaacctt cctgtttggc gattttgacg atgacgcggt tggcgttttg ctggagggag
    10201 gcaaactctt cgttgcggcg gaggttgtag tcttcttcaa actgcgcctg ttttttgcgg
    10261 aacgcttcga ccagcccgcg ccatttttct tcggcttgcg ccttttttgc gtccttaagt
    10321 ttgccgccgg cgagctgcct ttccaaatcc aagccttcgc gttgcagttt ttgcaattcg
    10381 tcctgacggg cggaaaattc gccgtccagc gttttttgga tgttgcgcgc ctgcttggat
    10441 tcgaggtaga tgcgctcggt gttgataaag ccgatttttt ggaaggtgtc ggcgtgcgtg
    10501 cctgtggtgc agcataaacc gatcagggtg gcggcaaacg cgcgggtcaa acggatcatg
    10561 gtaaaactcc ttcggatgtt gccgcgaaat gccgtctgaa gggcttcaga cggcatttgc
    10621 gggattagaa cgtcgtgccg agctggaatt ggaagcgttg gatttcgtct tccggttttt
    10681 tcttcagcgg gtaggcgtag ctgaatttca tcgggcccaa aggcgagagc caggtaaccg
    10741 cgccgccggc ggaatagcgc aattcgttgg taaaggtgga tttatgcgcg ttttccgagt
    10801 aaaccgattt gttgttaccg ttttcggcgg cggtataggt tctgccgtcc cacacgctgc
    10861 ctgcgtcggc aaacaggctc aggcggacgg tgcgtgcgtc tttcgccccg ggcatcggga
    10921 agagcagctc ggcggagacg ttggcttttt tgttgccgcc gtagctgatt ttttcgccgt
    10981 attcgtcata cactttcggg ccgagcgtgc cgctttcgta gccgcgcacc gaacccaggc
    11041 cgccgccgta gaagttttca aagaagggga tttctttggt tctgccgtag ccgcccgcaa
    11101 tgccgacttc gccgccgagc atcagcgtga aggttttgct taaggggaag aaccaggttt
    11161 ggttgtgggt ggcggagtag tattgcagtt tgctgccggg cagggcgatt tcggcattta
    11221 cgccggtcag gtagccgcgc gtcggccata aggcgctgtc ggtcttgttg cgcccccagc
    11281 cgacagtgcc tttgtacagc aggcctttga agctgccgtc tgcgccgtcg gttttgccgt
    11341 attgtttgat aaagtcggca tagcgtttgg gtgctttgtt gtaggtgttg acggtcaggt
    11401 gttccgccgc cagcccgaaa ttgacgcggt cgtattcggt aacggggata cccatcctta
    11461 cgccgccgcc ggcggtggtg gttttatatt gtttgacgct ggtcgatgct ttgcgcgggt
    11521 cgaaggcttt tccgtaaata tcgtagccca ggctgacccc gtctgccgtg aagtacgggt
    11581 cggtaaacga cagcgagccg ttgagcgtgg ttttgcttcg cgaggcgcgc agggcggccg
    11641 acttgcccgt accgaacagg ttgtcctgcg atacgccggc ggacatgacc aagccggtat
    11701 cctgaaccca gcccgcgctc aagtcgagcg agccggtgga gcgttcggtc aggctcatgt
    11761 tcaaatcgac tttgtcgggc gtaccggcaa gcgggacggc atcaaactgt acgttgtcga
    11821 agtagcccaa aagctcgacg cgctctttgg agcgttgcag cttggaggtg tcgtaaggcg
    11881 cggattccat ttggcgcaat tcgcggcgca cgacttcgtc gcgggttttg ttgttgccgg
    11941 tgatgtggat ttcgttgacg tagattttcc ggcccggttc gatgtgcagg acgaaatcga
    12001 cggttttggt tccggcgttc ggcagcggct gtacgctgat ttcgctgtat gcgtagcctg
    12061 ccgagcccat gcggttctga atctcaccca aaacggcggt catctgctgg cgttcgtacc
    12121 atttgccggg cttcatggtc agcagttttt ccagttcgac cttggggact tcgttggtgt
    12181 cgccttcaat cgacactttg ccccagcgga aacgtccgcc ttcgtggacg gtgattttga
    12241 tggtctgctt ggttttgtct tcgttggttt ggatgtcggt atcgaggata cggaaatcga
    12301 agtagccgtt gttctggtag aagtcggtta ctttttccat gtcttgggcg aatttctggc
    12361 ggtcgaaccg gtcgcttcgt gtcagccatg tccaaatgcc gccttcggtc agcgacatct
    12421 gccgcatcag tttgcggtcg gaatagactt ggttgccttc aaattcgatg tcggtgattt
    12481 tggcggattt gccctcgtca atcgtgatgt cgatgtcgac gcggttgcgg gcgagtttgg
    12541 ttactttggg cgtgatttgg atattgagtt tgccgcgccc gaggtattct tctttcaggc
    12601 cggcgactgc ctggttgagt gtcgcctgat taaagtattg cgactgcgcc agcccgaacg
    12661 attcgaggtt tttcttgatg gcgtcgtttt gcagcatttt ggcgccggtg atgttgagcg
    12721 agccgatggt ggggcgttcg ataacggtca gcagaagctg cccgtccgca gtttcgactc
    12781 gtacgtcgtc aaagaaaccg gtggcgtaca ggcttttgat gatggcactg ccgtgtgtgt
    12841 cgttgtaggt gtcgccgact ttgacgggca ggtagttgaa tacggtgctc ggctcggtac
    12901 gctgcaagcc ttcgacacgg atgtcttgga tggtgaagtc ggcaaatgcc aaaggcgata
    12961 tgcccaacat catcagtgcg gaggcaatct gtttcagttt catcgtaagt tccttgtggt
    13021 gcggaatgcg gtttcagact gcattccgaa acgtaaaatc taaccgatca gccgggtaac
    13081 gtcgttgaag aaggcggccg ccatcatcag catcatcagg gcgagcccga agcgcaaacc
    13141 gatgttttgg acacgttcgc ccaaaggttt gccgcgtatc cattcgacag tataaaacac
    13201 gaggtgcccg ccgtccaaaa cggggacggg cagcaggttc agcacgccga ggctgatgct
    13261 gaccaacgct aaaaattcca aataactttg caagccgagt tcggcggact gtccggcaat
    13321 gtcggcaatg gtcagcggcc cggaaatatg gctgacagag gcgttgccgc tgattagttt
    13381 gccgaaaaat ttgagggttg tccacgagtg ggaaacggtt ttttcccagc ccatgccgaa
    13441 tgcgcggaca acagacggac ggtagctgcg gcggatttgc gcgtcccacg ccctgtccgg
    13501 ctgcggacgg aggccgacgc gcccgatcag ggtgtggtcg ggctgttcga cagtatcggg
    13561 gcggatgtcg gcggtatggg tttgtccggc gcgttcgtag gtcagggtga tttttttgcc
    13621 cgggctttgg cgggtcaggt ttgcccattc ctgccatgag gcgatgggtt tgccgtcggc
    13681 ggcagtcagc ctgtcgcccg gtttcaggcc tgctttttcg gcggggctgc ctttttccac
    13741 gccgccggca acggttgtga ttttaaaggg catcagtccg atgtagcctt ggttttttgc
    13801 gattttaccg gcttccggcg tgcctgcggc atcgatggtg cggacggttt gcgcgcccga
    13861 tgccgtctga acgccgacgg cgactttgcc ggcttcgagg ttgaggacga tttcggtttg
    13921 cgcgctgctc cagtcttgga cggaaacgcc gttgacggat tgtattttgt cgccgctttg
    13981 gaagccggtg cgggcggcaa tggtgtcggg ttcgactgtg ccgacatagg gccgcagttc
    14041 ggttacgccg aaggaaaagc tcagtccgta cagcaaaacc gccagtgcga ggttggtcag
    14101 cggaccggcg gcgacgatgg cgatgcgctt ggcggggtgt tgtttgtcaa aagcgtaggg
    14161 taaatcggct tctgatactt cgccttcgcg cgtatcgacc attttgacgt agccgcccaa
    14221 cggaatcggg gcgaggcacc attcggtgtc gccgcgcttt cgggtgaaaa acggtttgcc
    14281 gaagccgacg gaaaaacgca caaccttgac gccgcacaac ctggcgacga tgtagtgtcc
    14341 gaattcgtgc aggctgacca aaatcaggat ggcgaagata aaagctagaa gggtttgcaa
    14401 atggttttcc tttgataacg gtgttcggac ggtatcagcg cagtgtgccg ataaatgccc
    14461 gcgcttgtgc gcgtgtccgg gcatcttgcg ccaacagtcc ttctatatcg cccatgccgt
    14521 ttgaaaagtc ttgtgcaaga cagtgggcga cggttttggc aatgtcggta aacttaatct
    14581 gtccgtccaa aaaggcggcg acggcggttt cgttggcggc gttcaatacg cagggcgcgg
    14641 ctccgcctgc gtttatggtt tcataggcga acttcaggca ggggaagcgg ccgaagtcgg
    14701 gcttttggaa ggtcagcgcg gacaatgcgc cgaaatcgag tttgccgaca cccgaatcga
    14761 tgcgctcggg caagcccaaa caataggcga tgggcgttcg catatcggga ttgcccagtt
    14821 gcgccagcac ggagccgtcg cggtagcgca ccatactgtg tatcacggat tggggatgga
    14881 tgacgacttc gagtttgtcg ggcggacagt tgaacagcca atgcgcttca atcagttcca
    14941 agcccttgtt tgccatagtg gctgaatcga cggagatttt gcgccccata cgccaattgg
    15001 ggtgtttgac cgcctgctcg ggcgtaatgc tgtcgaacgt gcttaaatcg gttgttaaaa
    15061 acgggccgcc ggaagcggtc aggataatcg aatcgatgcc gtgttcgttc agacggtctg
    15121 tgtaatcgcg cggcaaaact tggaaaatgg cgttgtgttc gctgtcgacg ggcaacactg
    15181 ccgcgccgtt tgcgcgggcg gtttccataa acaacgcgcc ggaaaccacc agcgtttctt
    15241 tgtttgccag ataaatggtt ttgccttttt gcgccgctgc gagcgcggaa ggcagccccg
    15301 ccgccccgac gatggcgcac atgacgccgc tgacttcgtc ggcagacgca acgtcaacca
    15361 atgcctgcgc gccgtgtaaa acctgagtcg ccgtgccgtc gcgtttcaac agggcttcaa
    15421 gccgggcggc gtgttcggca tcggcaacga cggcatattc ggggcggaac gtttgacatt
    15481 gagccgccag tttctcgacc tgcttatgcc ctgccagcgc gaatacgcgg aatttttcgg
    15541 gatggcggga gacaacgtcc agcgtgcttt cgcctatgct gccggtactg cctaatatgg
    15601 tcaggacttg tggtgtcata atgaggataa ctttataccg gatgccgtct gaagcgtttt
    15661 cagacggcat agaatcaatt taaaaccgac attatcgccg catagacgct gataacggca
    15721 atcaggctgt cggtacggtc gaacacgccg ccgtgtccgg gcagcaggtt gctgctgtct
    15781 ttgatgcctg ccgcgcgctt gagccagctt tccaacaggt cgccgcatac gctgacaacg
    15841 gtcaacacca aaccgattaa cacggtatcg aaccagcctg tatcgaatgc cagccagccg
    15901 gcacttcgta cggcagtcat gtacactgcc acgcaaaccg caccgccgat tgcgccttcc
    15961 cagctcttgc cggggctgat tgccggtgcg attttgtgtt tgccgagcgc cttgccgctg
    16021 aaatacgcgc aaacgtcggc aacccagacc aaacccatca cggcgagcag cggcagggca
    16081 tcatcgggat gcgggcgcag ggatacgagc gcgaaccaaa acggcatgag caaaagccag
    16141 ccgacggcat aaacctgcca accgccgttg agcctccatt tgaatctcaa ccacaaaggc
    16201 ataacggcga gccaaaatgc caaaacaaca taccaaacca aattaggcag catccagccg
    16261 cccgcatagg caactacgcc gaaaaccaag gttgcggcga ggtaatggtt ggtttcggtt
    16321 ttgcacaaac cggccatacg ggcatactcc cacaaggcgg tcagggcaat cagcccgcaa
    16381 aatgcagccc acagccattg cggcgcgtaa aacagcatgc ccagcatcag cggcagcagc
    16441 cacatagcgg ttattacccg ttgtttcagc atattcagtt cctttgctgt ccgataggca
    16501 gttgctcgga agtgcgtccg aaccgccgtt cgcgtttttg gaacgaagcg acggcggcat
    16561 ctaaggcggt ttcgtcgaaa tcgggccaca ggatgtcggt gaaatacagt tctgcatacg
    16621 ccatctgcca gagcaggaaa ttgctgatgc gcgtttctcc gcccgtgcgg atgaacaaat
    16681 ccggttccgg cgcgtcgccc agcatcaagt gtttggccag cgtgtcttcc gtaatctcgg
    16741 atacgccttc ggcaatcagt ttgtttgccg cctgcaaaat atcccagcgg ccgccgtaat
    16801 ccgcagcaat gctcagggtc agaccggtat tatttgccgt caaggcttcc gcctcttcga
    16861 taccttgcag aatctgccga ttaaagcgtt cgcggctgcc caatattttc aggcgcatat
    16921 tgttttcgtg caggcggcgt acctgttttt gcaaagcctg taaaaacagc cccatcagga
    16981 acgaaacttc gtcttcgggg cgacgccagt tttcggttga aaaggcaaac acggtcagat
    17041 attgcacgcc cagtttggcg caatgcttca ccatattttc caacgcgtcc aagccgcgtt
    17101 tgtgtcccat tatacgcggg agaaaacgtt ttttcgccca acggccgttg ccgtccataa
    17161 ttacggcgat gtgcctcggg atggcggtgt gttccaaaat ggtctgcgtg ctgctcttca
    17221 tatctgcctt tcgcggttcg gcgttcaaat gccgtctgaa cgccgcgccg tgagatttaa
    17281 accgccatca ggtcttcttc tttggcagcc aaaaccttat cggcttcggc aatgtacttg
    17341 tcggtcagtt tttgaaccgc ctcttcgccg cgacgtgcct cgtcttcgga aatttctttg
    17401 tctttgagga gttttttgat gtggtcgttg gcatcgcggc gcacgttgcg gatagagacg
    17461 cgtccttctt ccgcctcgcc gcgcacgact ttaatcaggt ctttgcggcg ttcctcggtc
    17521 agcatgggca tcggcacgcg gatcaaatcg ccgacagctg ccgggttcag tcccaagttt
    17581 gaatcgcgga tggctttctc gactttggcc gccatattgc cctcaaacgg tttcacgccg
    17641 atggtgcgcg cgtccaaaag ggttacgttg gcaacctggc tgacggggac catgctgccc
    17701 cagtattcga cttccacttg gtcgagcagg ccggtatgcg cgcggccggt acgcactttc
    17761 gccagatttt ctttcagtac ttcgaccgaa cgctgcatct tgccttcggc tgttttttga
    17821 atatcgttga tcatattgtt ctttcggtaa gataaggtag gcgggcagcc gttcgaacgc
    17881 gctccaagcc gttcagacgg cataaagacc gttaactgcg aatagtaccg ttattcgggc
    17941 atgacgacaa ggcagatgcc tgtaggaagg gtgtttcacc tttctagggt ttttttaatt
    18001 gccgctgcaa tttcgtaggc aaggttgacg gggacggcgt tgccaatcat tttgtatgcg
    18061 tcgttgacat tttgatagat gaatttgaag ttgtcgggaa agccttggat tcttgcaact
    18121 tcgcgtaccg tcatcctccg atatagtgtt tctttgccgg cagcaaaacg gtagtcgttt
    18181 gccccgtgct tttccatctt tggggcttgc gggtgcagtt ggcactgcct gcctgaagct
    18241 tggacggtaa aaccctgttc atcccacgct ttaactcggt tccggctcat aaaaataggg
    18301 gaaaaactgc cggtaaaata ttcgttgttg ttgactgcgt cggggttggt cttgttttgc
    18361 ggggcggaag gtacggctgt gtcctgcaaa tcccaaataa cgtctttcaa tgtaatcttg
    18421 tctttgtctt cgaccgtcga accttttgga aaagaaaatt ttatttccaa gtctttacgg
    18481 aaaccgatgt agaagaccct tttgcgttcc tgtgctacac cgtagtcttt ggcgttggcc
    18541 atagtcaagg ttacgtcgta tccgcatccg tcaaacattt tcagcaggtt ttgtacggct
    18601 ccgttgtggc ggtttgccag cattccgctg acgttttccg ctaaaaagaa ttttggctgt
    18661 ttgcttttca aaatacggat gtagtcgaaa aacaactgtc cgcgcgcatc gtcgatgccg
    18721 cgcaaagctc ccgcttcaga ccaagactgg cagggtgggc cgccgataat cccgtcgatt
    18781 tcttcaggga aatcttcttc tttaatcttg cgtatatcgc cttctatcaa atgggtcttt
    18841 ggatggtttg ccttgaaggt tgcccaaatg gttttatcgt attcgttggc ggcggggatt
    18901 tcaaatcccg ctttttcgaa acccaaatcc aaaccgccgc aaccgctaaa caaactaatg
    18961 attttcatag gattataagt ggtaggtgat gagttttgca tttcttaatc gcgccgggtt
    19021 gttgggattt ttaattttaa tgtcggaaat ggccagtttg gaatcctgta tggcaagcag
    19081 cttgtctgta ttgttaaaac tgttccattt gtcttcgttg ataatggcca tgaaattgaa
    19141 acttttttcc atattccgtt ggtaaatata gttgaagaca aaccatggat tttcgattcc
    19201 ccacataccc cgtactctca gataagttat gttgagcgga tcaatgcggt tgaccctgcc
    19261 cagctctttg gtttctgcaa actgtatgcc gccgatgttg ccgattcctt ccttaatttg
    19321 attttttatc ttcaaatagc attcggcatc ggcgcagtag tcgattccgt aaaccattgc
    19381 caagtgtttg aggtttttct ttttgtcaac gacgccgaca atatagataa tgtctttctc
    19441 ttcccatttt tccgcatctt tgcaggcttt tgtaagcatg ctgtcatcaa cagagagctt
    19501 tgattttggg tggctgctat tcagcgccag tgcggaatct ttactttcaa ttttcttaac
    19561 ttcgatggca tccccgtttc gcaacatggc atcaggaggg ttggagttgt tgcccaaata
    19621 tgagaatact tttgcgtgtc gggctatgcg ttgggtttca tttaggttga aactgccgga
    19681 aaacaagtct tttacatatt cttccaaagc atcacctgcc tgattggcac gattgttgct
    19741 ttgagaatgg gattcgaccc cgacaacagg gttgttagcc aaattgatga tggcatcgat
    19801 aatgttcatg gtttttcctt ggggttttgc ggcagattat agcaaaaccg tcagggtgtt
    19861 tatcggaccg atgccgtctg aagcggcagg cgtttcagac ggcatcgtgt ccggccgtca
    19921 gccgtgttcc cgtgtttcaa gcaggctttg gcgcaggtgt tggcgttcgt gggcatccag
    19981 ccatttgcgg cgggtgcgtt gcagcaggat gacgagggcg gaaatttcct gacgcatatt
    20041 ggtgctgagc cagaggaagc cctgccattg gtagtggagg tgttcggcga gggcttccag
    20101 ttcggggttg atggcggtgt cgatgcggat gcggcgggcg tgtctgccgt tgatgagggc
    20161 ggcggtttgt tgcaggtcgg tttggagcag tgtgaagtgg cggtcgagca gccggatttc
    20221 gctgccgttg agtttgggag attgcagctt ggcggcggtg gtcaggagca gctcggtggt
    20281 gttgacgatt ttgcggtggg cgtgctgcat ggcttccatc atggaggggc tgatgcggct
    20341 ttcgcccgat gtggcggcga ggtggctgcg gcttttgacc atgcgtgcgt tgatttggcg
    20401 cattttgacc atattctgct ccaaacgttc gcgcgtcata cgcctgccgt tgctgatttc
    20461 ggcaatcatt ttgctgcagt cggccaggtt gtcggcaagc atgaaacgcc acatcagtgt
    20521 ggatttcagc ggcagcagtt tggcggcggc aatggcgatg gcggcgccga tgaggacgtt
    20581 catcgcgcgc atcaggccgc tgtcgagcca ttcgctgccg ttgtcgccga tgagcatgca
    20641 catcgtcagc cccgccagca tagggacgta gccgtttttg ccgaccgccg cccagccggc
    20701 cagtgcgctt gccgtgccga tggtcaggta gaagaggagg ttgccgtgga aataatgctg
    20761 gttcagccat aaaacgccca aacccgcgcc cagcccgatg accgtaccga gcatacgttc
    20821 caccgccttg gagtaaatcg cgccttggaa ctggagcatg ccgaggacga cgaagacggt
    20881 catccctatc cattcgccgt gttggaggtg gagtagccgg gcgagtgcgg tggcgaacag
    20941 gacggctccg ccgagccgca cggcatgtat gaggcggcgg tggcggtagc gttcgtagga
    21001 gttgagccag cggccggaaa ggcgtttgcg ttgcgaggag ttcatatcgg atgccgtctg
    21061 aagcggaaat gtgaaaaagc acaggcttcc cgagggaggg tctgtgcttg gtattggtgc
    21121 cggagaaggg aatcgaaccc ccgaccttcg cgttacgaat gcgctgctct accgactgag
    21181 ctacaccggc gtttttcgtt atgatatata taaacggttg tttgtgcaac ttttcgggcg
    21241 ggcggcaagg cggtgcgcgg tataatgcgg cctgcttcgg aagagggggg acggcgatgt
    21301 ttgtgaacga gaaatatcct tatgcgaccc tgtttgcggg gctggtgttt ttgacgctgc
    21361 cgtttgcgtt ggcggtgcat gatgcctttg catgtgcgtt cggacgggcg gggctgctgg
    21421 tgtcggtgtc ggacggcgga ttcggccggc gtggcggttg ggacggcact gtttggtttg
    21481 tgttcggtgt gtttgcgttt ttgaatgtgg ttgtgtcggc gggcctgacg aaactggcgt
    21541 acaaaaagat gatgcggcgg cattcgcgtt acgcgctgtt tctgtcgggc gtggcggctt
    21601 gcgcggcggt ggcttggatt ttcaagctgt tgttgggcag tgccgccttg ggcgggctga
    21661 gcggggaggc ggtgtcggaa tatgcgtttg ccgtgtggct ggtgtctatg ctgacgctgc
    21721 cgaaacgcct gacgcgcgcg ccggtgcagc ctgtggtgtt ccacaggaaa aaataggacg
    21781 gaacggaaat gccgtctgaa acccgatacg cggtttcaga cggcatgttt ttccgctaac
    21841 attacgcctg aatatggaca ggaagcagat atggaacgta aagaacgcct gcgtgcaggc
    21901 attgccgcga tggggccgga tatttcggaa acggcgcagg acaggctttt ggcctatgtg
    21961 gatttgttga aaaagtggaa caaaacctac aatctgaccg ccctgcgcga cgaggaaaaa
    22021 atgattgtcc atcatctttt ggacagcctg acgctgctgc cctatatcga aggcgcacag
    22081 acgatgctgg atgtcggttc gggcggcggc cagcccggca ttccggcggc ggtgtgccgt
    22141 ccggatgtgc agataacctt gttggatgcg aatacgaaga aaacggcttt tttgcggcag
    22201 gcggctatcg agttggggct ggacaatgtg cgcgtggtgt cggggcgcgt ggaggcggtt
    22261 tcggacgtgc gtgccgacgt ggttaccagc cgtgcgtttg cggaactggc ggattttgtg
    22321 tcgtggacgg cgcacctgtt gaaagacggc ggctactggg cggcgatgaa gggcgtatat
    22381 ccgcaggggg aaatcggccg cctgccgcag gatgtgtgcg tcgaaaaagt ccaaaggctc
    22441 gacgtgccgg gcttggatgc ggaacgccat atcgtcatcc tgagcaagcg ttgagcgcgc
    22501 ttcagacggc atgaatacct tttttgtgcg gataaaggta aaattccgca ctgtttttct
    22561 ttttttcaac atcagacggg acacgggcgg gacatgagtg cgaacatcct tgccatcgcc
    22621 aatcagaagg gcggtgtggg caaaacgacg acgacggtaa atttggcggc ttcgctggca
    22681 tcgcgcggca aacgcgtgct ggtggtcgat ttggatccgc agggcaatgc gacgacgggc
    22741 agcggcatcg acaaggcggg tttgcagtcc ggcgtttatc aggtcttatt gggcgatgcg
    22801 gacgtgcagt cggcggcggt acgcagcaaa gagggcggat acgctgtgct gggtgcgaac
    22861 cgcgcgcttg ccggcgcgga aatcgagctg gtgcaggaaa tcgcccggga agtgcgtttg
    22921 aaaaacgcgc tcaaggcagt ggcggaagat tacgacttta tcctgatcga ctgtccgcct
    22981 tcgctgacgc tgttgacgct taacggcttg gtggcggcgg gcggcgtgat tgtgccgatg
    23041 ttgtgcgaat attacgcgct ggaagggatt tccgatttga ttgcgaccgt gcgcaaaatc
    23101 cgtcaggcgg tcaatcccga tttggacatc acgggcatcg tgcgcacgat gtacgacagc
    23161 cgcagcaggc tggttgccga agtcagcgaa cagttgcgca gccatttcgg ggatttgctt
    23221 tttgaaaccg ccatcccgcg caatatccgc cttgcagaag cgccgagcca cggtatgccg
    23281 gtgatggctt acgacgcgca ggcaaagggt gccaaggcgt atcttgcctt ggcggacgag
    23341 ctggcggcga gggtgtcggg gaaataggtc aatccaaatc gggctgcccg tgcctttatg
    23401 ctgtttggcc gggtgcgtta atatggcgga ttaaaataaa aatacttata tcgtcattta
    23461 tagcggatta acaaaaaccg gtacggcgtt gccccgcctt agctcaaaga gaacggttcc
    23521 ctaaggtgcc caagcaccag gcgaaccggt tccgtactat ctgtactgtc tgcggcccgc
    23581 cgccttgtcc tgatttttgt taatccgcta tatcgtcatt cccgcaaaaa caaaaaaatc
    23641 aaaaacacaa aactgaaata tcgtcattcc cgcgcaggcg ggaatctagg tctgtcggta
    23701 cggaaactta tcgggaaaaa cggtttttcc aaccctgaga ctccggattc ctgttttcgc
    23761 gggaatccgg ttttttgagt ttcagtcatt tttgataaat tcttgcagct ttgagtttct
    23821 agattcccgc ttttgcggga atggcggttt ggaagttacc tgaaattcaa aaaaaaaaac
    23881 ggaaaccgga cggattggat tcccgcctgc gcgggaatga cggattttag gtttttttga
    23941 ttttctgttt ttcgcgggaa tgacggttgg gaagtttccc gaaacttaaa aacaactgaa
    24001 acccaaaaaa ctaaattacc gcctgcgggg gaatgacggt tcgggttctt tctctttgaa
    24061 gttgcgatgc tggaaatgcc gtctgaagtt cagacggcat ttttgtgccg gtttaaaaca
    24121 aggcctgctg cgcgagcagg tttctgacgg gggcgaagtc gcggcggtgt tcgggcagca
    24181 cgccgtattg tttgagggct tccagatgct gctttgtgcc gtaacctttg tgtttgtcga
    24241 aaccgtattg gggacggcgt tgcgccagtg cgtacatttc cgcatcgcgt gcggtctttg
    24301 ccaaaacgga tgcggcggag atttcgatga ttttgctgtc gcctttgacg actgcttcgg
    24361 cagggatgcc caaatgttcg ggaatgcggt tgccgtcgat gaatattttt tcgggacgcg
    24421 cagccaaacc gtaaacggca cgtttcatgg cgagcatggt ggcgtgcagg atgttgaggc
    24481 ttgcgatttc ttcgggcgtg gaggcggcga cgtgccacgc gaccgcctgt tctttaatca
    24541 tttcggcaag cgcgtcgcgt tttttctcgc tgagtttttt ggagtcggtc agtccgggca
    24601 ggtcgaatgt ttccggaagg atgacggcgg cggcaaacac gctgccgacc aaaggtccgc
    24661 gtcctgcctc gtccacgccg gcggtcagta tgtgcatgat gtttcctgtc gggatggtac
    24721 gatgccgtct gaaaatggtt tcagacggca tcgtaccgat gtgtttattt cgcgtcttta
    24781 aacccgcgct tcaaatgcac catcagcagt gcgacggcgg caggcgtaac gccggaaatg
    24841 cggcttgcct gcccgacggt ttcgggtttg tgctggttga gcttttgttg cacttcggcc
    24901 gacaagcctt tgactctgcc gtaatcgatg ccgtcgggca gctttaaggt ttcgatgtcg
    24961 cggcggctgt cgatttcttc gttttggcgg tcgatatagc cttggtattt gacttggatt
    25021 tcgacttgct cgatgacttc ggcagagagg ttttcagacg gcatcgcgcc ttcgagcgtc
    25081 atcagcgcgg cgtaatcgag gttcgggcgg cgtaacaaat cgtgcaggtt ggcttcgcgg
    25141 ctgagttttt gtccgaacac gcggatttgt tcgtcttcgg cgagtttttg cggcgtgtac
    25201 cacgttgttt tcaaacgttg gatttcgcgt tcgacggctt cgcgtttttc gttgaacatg
    25261 cgccattgcg cttcacccac caagccgatt ttgtagccgt cttcggtcag gcgcatatcg
    25321 gcgttgtctt ccctgagttg caggcggtat tcggcgcggc tggtaaacat ccggtaaggt
    25381 tcgttcaggc ctttggtgat gaggtcgtcc accaatacgc cgaggtaggc ttgttcgcgg
    25441 cgcagcagga gcggatcttg tccgcggacg tattgcacgg cgttcgcgcc cgccagcaat
    25501 ccttgcgcgg cggcttcttc atagcctgtc gtgccgttga tttgcccggc gaaaaacagt
    25561 ccctcaatgg ttttggtttc gaggcttgct ttgaggttgc gcggatcgaa gtagtcgtat
    25621 tcgatggcgt agccggggcg caggatatgg gcgttttcaa gacccttcat actgcgcacg
    25681 agcgcgattt ggatgtcgaa cggcaggctg gtggagatac cgttggggta gtattcgtgc
    25741 gtggtcagac cttcgggttc gaggaaaatc tggtggctgt ctttgtcggc gaagcggttg
    25801 attttgtctt cgatagacgg acaataacgc ggacccacgc cttcgatttt gccggtaaac
    25861 atcgggctgc ggtcgaagcc tgagcggatg atgtcgtggg tttgcgtgtt ggtatgcgta
    25921 atccagcagg acacttggtg cgggtgcatt tcggcgttgc cgcgcacgga catgacggga
    25981 acgggcgtgt cgccgggctg ttcggtaagt tgggaaaagt caatcgtgcg tccgtcaata
    26041 cgcggcggcg tgccggtttt cagacggcct tgcggcagct tcaattcgcg caaacgtccg
    26101 ccgagcgatt tggcggctgg gtcgccggcg cggccgcctt cgtagttttc caaaccgatg
    26161 tggattttgc cggacaagaa cgtgcctgcg gtcagcacca cggcgcgtgc tttaaactcc
    26221 gcgcccatcg cggtgatcac gccgctgatg cgttcgccct cgagtgttac gtcttcgacg
    26281 gcttgttgga aaaggtcgag gttttcttgg ttttccaaca tttcgcggat ggaggcttta
    26341 tacaggatgc ggtctgcctg cgagcgcgtg gctcgtactg ccgcgccttt gctggcgttc
    26401 aggcggcgga attggatacc tgatttgtcg gttgccaacg ccattgcgcc gccgagcgcg
    26461 tcgagttcgc gtaccaaatg ccctttgccg atgccgccga tagaggggtt gcacgacatt
    26521 tgtccgagcg tttcgatatt gtgtgtgagc aaaagcgtct gcgcgcccat acgggcggcg
    26581 gcaagcgcgg cttccgtgcc ggcgtgtccg ccgccgacga cgatgacatc gtaggttttg
    26641 gggtaaatca tgtgggtcat gtgtgtattg cctatcggtt tttcagacgg cattccaagc
    26701 aggatgccgt ctgaaaaacg aaacggattc aaaagtaaag ggttgggatt gtacgcctgt
    26761 tcgccctgtt tttacagtgc gcggaaaggg aaaagccgct tcgcggggaa gcggctccgg
    26821 taagggtggg atttaccaaa catcggattt gatgcggcgt ttcaggcccg gatgttcgga
    26881 aagtttgaac tcggggtctt tgcccatttt cagcttggcg gtgtaatcgc gcagcagcat
    26941 aaacgccaat ggcgagagca gcaggatggc gacgaggttg atccacgcca tgatgcccat
    27001 cgccatatcc gccatatccc agaccaaagg cacattggca accgcgccga aatagaccca
    27061 cgccaaaacc agcatacgga aaacggcggt aatcagccaa tggcttttga tgaattggac
    27121 gttggactcg gcataggcat agttgccgat aacggtggaa aaggcaaaca taaacaggat
    27181 gacggcgagg aaacccgcgc cccattgccc cacttggctg acaatcgccg cctgcgtcag
    27241 cgccgcaccg ctcaaatcgc cataaggctg ttggtaaatc aagatgatga aggcggtgca
    27301 agaacaaacg atgatggtat cgacaaacac gcccagcatt tgaatcatac cttgcgaaac
    27361 agggtgtttc acttcggcgg cggcggcggc gttcggcgcg gaacccatac ccgcctcgtt
    27421 ggaatacagg ccgcgtttga tgcccatcat catcgtttgc gaaatcagac cgccgagtaa
    27481 gccgcctgct gccgcgtcga atttgaacgc gcccgaaaaa atctgaccga acacgtccgg
    27541 aatcatcgga atattggtca aaatgatgaa aagcgcgata aagaggtaca aaaccgccat
    27601 caggggcacg acgatttccg ccgctttgga tatgcgcctg atgccgccga agataatcgg
    27661 cgcggttaaa atcaccaggg cgacgccgac ataatgaggc tcccagcccc acgccgcttt
    27721 gacggtatcg gcgatggtat tggtctgaac cgcttcaaac acaaaaccga aacagaaaat
    27781 caggctcagg gcgaacaaca cgcccagcca tttctgcccc agaccgtgcg tgatgtagta
    27841 ggcagggccg ccccggaaat ggtggttgtc gcagtcgcgg actttaaaga gctgcgccag
    27901 cgaagattcg acaaacgccg aactcatgcc gattaaggcg gttacccaca tccaaaacac
    27961 cgcgcccggc ccgccgactt tgatggcgat tgccacgccc gcgatattgc ccacgcccac
    28021 gcggctggca aggccggtta caaatgcctg aaacggcgtg atgccgtgag ggtcgtcccc
    28081 ctgtttgcgg ccgccgagca tttctttgat gctgcgcccg aacaggcgga attggacaaa
    28141 gcccgtggtt acggtgaaga aaagccccgt acccaaaagc atataaacca agtatgacca
    28201 catcggatcg ttgatggcgc cgacccagcc gtgcagccat tcggtaaagt tctcgttcat
    28261 atcgcttcct taaagttgaa acccgcacat atggcggtat gcaagcaggg tttaaatttt
    28321 gtaaacgccc attctagcag attgtcaaca aaatcagaaa aatttacatc gccgcgcgcc
    28381 tgtggcgtta gaatcgcgtt ttgtttggag caaacacgat gaaacagcct gtttttgccg
    28441 ttacttccgg cgagcctgcc ggcatcggcc ccgatatttg tttggacttg gcgtttgcac
    28501 gcctgccctg ccgctgcgcg gtattgggcg acaaacacct gttgcgcgcg cgcgccgaag
    28561 ccttgggcaa aagcgtcgtc ctgcgcgact tcgatccgga atcaggcggc gcgcacggag
    28621 aaggcgggct ggaagtgctg cacatccctg ccgccgaagc ggttgaggca gggtggctca
    28681 atcccgccaa cgccgcctat gtgctgcaac ttttggacac cgcgctcgca ggcatttcag
    28741 acggcatttt cgacggcatc gttaccgcgc cgctgcacaa aggcatcatc aacgccgcgc
    28801 gcgcaagcac aggttttttc agcggacaca ccgaatatct ggcggaaaaa agcggcacgg
    28861 ggcaggtcgt gatgatgctt gccggcaaag gcctgcgcgt cgccctcgta acgacccacc
    28921 tgccgctgaa agacgttgcc gccgccatca cgcaaccgct gattgaaagc gtcgcacgca
    28981 ttttgcatca cgacttaaaa cacaaattcg gcatcaaaaa tcccaaaatc ctagtcgccg
    29041 ggctcaatcc ccacgccggc gaaggcggac acctcggaca cgaagaaacc gacaccatta
    29101 tccccgcgct cgaaaacctg cgccgcgaag ggataaacct cgccggcccg tatccggcgg
    29161 acacattgtt ccaaccgttt atgctcgaag gtgcggatgc cgtattggcg atgtaccacg
    29221 accaagggct gcccgtgttg aaataccaca gcttcgggca gggcgtgaac atcacgctgg
    29281 ggctgccctt tatccgcacc tccgtcgatc acggcaccgc gctcgatttg gcggcaaccg
    29341 gcagggcgga ctccggcagc ctgataactg ccgtggagac cgccgtcgag atggcgcgcg
    29401 gcagccttta aagatgataa aagacccgtc attcccgcgc aggcgggaat ccggaccttc
    29461 gggcggcggc aatattcaaa ggttatccga aagtttgagg ttctagattc ccgttttcac
    29521 gggaatgacg aaaggtggcg ggaatcacgg gaatggcgaa gtttcaggcg gtattgcagg
    29581 tatccgaaac catgcaaaaa gaggttctgc ggaacagaac ctctttttgc cgccgtcggt
    29641 tcagccttgc cgggtttcga cttggatcat ttcttcggca gggacggttg cggcttcaga
    29701 cggttttggc tgttcggaac ggcgcaaacc gcgtccggct tggacttcgg gttgtgccgc
    29761 ccatgccttc aatgcggcag ggtcggtttc gatcaggacg agtccgccgg tttgtgcggt
    29821 ttcccgtgcc tgttccgccg cagccgtaaa ggttgcggtt tcagacggca tttcctgtgc
    29881 tgcggctttc ggtgccgcgc cttcgggcag gatgtcggcg gcggcacggc ggattttttc
    29941 cgccgcatca taaatcagtg cgtcgccgtt tgaaacggcg gaagatgccg tctgaacggg
    30001 tgtggcgatg agcggatcgg caatgctgac ggtaatcggc gcgtttgcgt cggtttcgcc
    30061 gaaaacgtgc gcggcggcgg aacggacttt gtcggcggtg tcgtgaatat tcaggtactg
    30121 ctcgattttg gcggcagacg ggatattgcg ttttttgccg ttttgacggc ggtcgcgctg
    30181 attgttgcgt tcgcggcgtt ctttggcatc gcggctgtcg cgttcgcggc ggttgcgttc
    30241 ggatttgggc ttgctgcctt tgtcttctgc ggtatacggt tcgggcggcg tgttttccgc
    30301 tgtctgaacg gctgtttcgg caacggcggc ggtttccggt gcggtttggc cacgttcgtt
    30361 gcggctgccg ttgcggcggc gttttccggt ttgaccttcg gtttcgggcg gtgcggcatc
    30421 tgcaacgggt gcggcaggct gtacgttgcg gctttggatt tccgcttcgt tggcgcgttc
    30481 ggtggcacgg tcgccgcgtt cgttgcggcg gcggttgccg ttgttgcgcg tttcggcttt
    30541 gtcggcgcgc gctttctgtc cggcagtttt gcccgccgct tcgcggactt ctattttgct
    30601 gccttcgcgt ttgctgcggc gcgggttttg gcggcggttg ttggcgcggc tgccgctgcg
    30661 gtttgccgtg ctgcgttttt cggaggtttc ggcagcgggt acggcttggg tttcgctgcc
    30721 gccgaaaatg cgtttgagcc atgctttgaa gctgtcccac caggaggttt ttttc
//
LOCUS       DAXFZM010000012        30325 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.012, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000012 DAXFZM010000000
VERSION     DAXFZM010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 30325)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30325)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30325
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.012"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(114..1256)
                     /locus_tag="ACFJAG_000481"
     CDS             complement(114..1256)
                     /locus_tag="ACFJAG_000481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HFC3979861.1"
                     /translation="MKKSVLAVLAALSLAACGGSEKNAVQPQAGSAPAANAEAAATDT
                     LNIYNWSNYVDESTVEDFKKANNLKLTYDLYENNETLEAKMLTGKSGYDLVVPGIAFL
                     PRQIEAGAYQKVNKDLIPNYKNIDPELLKMLETADPGNQYAVPYFSGVNTVAITAKGK
                     ELLGGKLPENGWDLLFKPEYTRKLKSCGIALWDTPSEMFPILLNYLGKDPKGSNPEDL
                     KAAAEVLKSIRPDVKRFSPSIIDELARGDICLAAGNGGDLNLAKARSEEVKNNVGIEV
                     LTPKGMGFWIESWLIPADAKNVANAHKYINYTLDPEIAAKNGIAVTFAPASKPAREKM
                     PAELVNTRSIFPNEQDMKDGFVMPQMSADAKKLSVSLWQKIKVGTN"
     gene            1557..1820
                     /gene="rpsT"
                     /locus_tag="ACFJAG_000482"
     CDS             1557..1820
                     /gene="rpsT"
                     /locus_tag="ACFJAG_000482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HFC3979862.1"
                     /translation="MANSAQARKRARQSVKQRAHNASLRTAFRTAVKKVLKAVEAGDK
                     AAAQAVYQESVKVIDRIADKGVFHKNKAARHKSRLSAKVKALA"
     gene            1980..3128
                     /locus_tag="ACFJAG_000483"
     CDS             1980..3128
                     /locus_tag="ACFJAG_000483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase A"
                     /protein_id="HFC3979863.1"
                     /translation="MPTMGAEMNTRNMRYILLTGLLPTASAFGETALQCAALTDNVTR
                     LACYDRIFAAQLPSSAGQEGQESKAVLNLTETVRSSLDKGEAVIVVEKGGDALPADSA
                     GETADIYTPLSLMYDLDKNDLRGLLGVREHNPMYLMPFWYNNSPNYAPSSPTRGTTVQ
                     EKFGQQKRAETKLQVSFKSKIAENLFKTRADLWFGYTQRSDWQIYNQGRKSAPFRNTD
                     YKPEIFLTQPVKADLPFGGRLRMLGAGFVHQSNGQSRPESRSWNRIYAMAGMEWGKLT
                     VIPRVWVRAFDQSGDKNDNPDIADYMGYGDVKLQYRLNDRQNVYSVLRYNPKTGYGAI
                     EAAYTFPIKGKLKGVVRGFHGYGESLIDYNHKQNGIGIGLMFNDWDGI"
     gene            3270..3971
                     /locus_tag="ACFJAG_000484"
     CDS             3270..3971
                     /locus_tag="ACFJAG_000484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF502 domain-containing protein"
                     /protein_id="HFC3979864.1"
                     /translation="MTEPAAEGGKAAKALKKYLITGILVWLPIAVTVWVVSYIVSASD
                     QLVNLLPKQWRPQYVLGFNIPGLGVIVAIAVLFVTGLFAANVLGRQILAAWDSLLGRI
                     PVVKSIYSSVKKVSESLLSDSSRSFKTPVLVPFPQSGIWTIAFVSGQVSNAVKAALPQ
                     DGDYLSVYVPTTPNPTGGYYIMVKKSDVRELDMSVDEALKYVISLGMVIPDDLPVKTL
                     AGPMPPEKAELPEQQ"
     gene            4029..5837
                     /gene="aspS"
                     /locus_tag="ACFJAG_000485"
     CDS             4029..5837
                     /gene="aspS"
                     /locus_tag="ACFJAG_000485"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HFC3979865.1"
                     /translation="MRTNYCGLISEQYLGQTVTVKGWVHRRRDHGGVIFIDLRDREGI
                     VQVVIDPDTPEAFAAADSARNEYVLGITGRVRNRPEGTTNDKMISGKIEILAKEIEVL
                     NAAATPPFQIDDENISENVRLTNRVIDLRRPVMQRNLRLRYQVATGVRRYLDAQGFID
                     IETPMLTRSTPEGARDYLVPSRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFR
                     DEDLRADRQPEFTQIDLETSFLNEDEIMDITEGMAKQVFKDALNVDLGDFPRMPYSEA
                     MFYYGSDKPDMRINLKFTELTDLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKE
                     IDEYTKFVGIYGAKGLAYIKVNDAGNLSNGEDSGLQSPIVKFLSENALKEIIERTAAQ
                     NGDIIFFGADKAKVVNEAVGALRIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEA
                     DRYVAVHHPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHRADVQEKV
                     FAALKISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIAFPKT
                     QRAQCLLTDAPNSVDDKQLRELSLRLRQKAVETKEA"
     gene            5987..6271
                     /locus_tag="ACFJAG_000486"
     CDS             5987..6271
                     /locus_tag="ACFJAG_000486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HFC3979866.1"
                     /translation="MKKLLLAAVVSLNAATAFAGDSAERQIYGDPHFEQNRTKAVKML
                     EQRGYQVYDVDADDHWGKPVLEVEAYKDGREYDIVLSYPDLKIIKEQLDR"
     gene            6438..8330
                     /gene="speA"
                     /locus_tag="ACFJAG_000487"
     CDS             6438..8330
                     /gene="speA"
                     /locus_tag="ACFJAG_000487"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008792 - arginine decarboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006527 - arginine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic arginine decarboxylase"
                     /protein_id="HFC3979867.1"
                     /translation="MPILTIREVCNINHWSIGYYDVDDSGEIIVRPNPSQHNQTVSLQ
                     KLTEAVQQKHQARLPVLFCFPQILEHRLRDINRAFQTAREECGYKGGYCLVYPIKVNQ
                     HRRVIESLMSSGQPHGLEAGSKAELMAVLAHAGTRQTLIVCNGYKDREYIRFALMGEK
                     LGHQVYLVIEKLSEIQMVLEEAEKLGIKPRLGVRARLASQGSGKWQSSGGEKSKFGLS
                     ASQVLQLVDILKQKNRLDCLQLLHFHLGSQLGNIRDVATGVHESARFYVELHKLGVNI
                     RCFDVGGGLGVDYEGNRTQSDCSVNYSLNEYAATVVWGISQACLEHGLPHPTIITESG
                     RGITAHHAVLVANVIGVERYKPRRLDAPSPEAPRVLHSMWETWTDISASREKRSLRSW
                     IHEGQFDLADVHNQYNVGLLSLAQRAWAEQLYLNICHEVGELFNEKHRSHRTIIDELQ
                     ERFADKLYVNFSLFQSLPDAWGIDQLFPVCPITGLNEPIARRAVLLDITCDSDGTIDH
                     YIDGDGIAGTMPMPDYPEEEPPFLGFFMVGAYQEILGNMHNLFGDTATADVVVREDGQ
                     FTVIDYDEGNTVADMLEYVYQDPKELMKRYREQIEHSDLPASQAMSFLKELEAGLNGY
                     TYLEDE"
     gene            8429..9352
                     /gene="speB"
                     /locus_tag="ACFJAG_000488"
     CDS             8429..9352
                     /gene="speB"
                     /locus_tag="ACFJAG_000488"
                     /EC_number="3.5.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008783 - agmatinase activity [Evidence
                     IEA];
                     GO_process: GO:0008295 - spermidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="agmatinase"
                     /protein_id="HFC3979868.1"
                     /translation="MQYSTLAGQTDNSLVSNNFGFLRLPLNFMPYESHADWVITGVPY
                     DMAVSGRSGARFGPEAIRRASVNLAWEHRRFPWTFDVRERLNIIDCGDLVFSFGDSRD
                     FVEKMEAHAGKLLSFGKRCLSLGGDHFITLPLLRAHARYFGKLALIHFDAHTDTYDNG
                     SEYDHGTMFYTAPKEGLIDPSRSVQIGIRTEHSKKLPFTVLSAPKVNEDSVEETVRKI
                     KETVGNMPVYLTFDIDCLDPSFAPGTGTPVCGGLSSDRALKILRGLTDLDIVGMDVVE
                     VAPSYDQSDITALAGATIALEMLYLQGAKKD"
     gene            9550..11016
                     /locus_tag="ACFJAG_000489"
     CDS             9550..11016
                     /locus_tag="ACFJAG_000489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008509 - monoatomic anion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006820 - monoatomic anion transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DASS family sodium-coupled anion symporter"
                     /protein_id="HFC3979869.1"
                     /translation="MMKLGFKPIPLAIAAVLCALVLALPVPDGVKPQAWTLLAMFVGV
                     IAAIIGKVMPLGALSIIAVGLVAVTGVTADKPGAAMSDALSAFANPLIWLIAIAVMIS
                     RGLLKTGLGMRIGYLFIAVFGRKTLGIGYSLALSELLLAPVTPSNTARGGGIIHPIMQ
                     SIAGSYGSNPAKGTEGKMGKYLALVNYHSNPISSAMFITATAPNPLIVNLIAENLGSS
                     FRLSWGAWAWAMAVPGVIAFFVMPLILYFLYPPEIKETPNAVQFAKDRLSEMGKMSAD
                     EIIMAVIFGILLLLWADVPALITGNHAFSINATATAFIGLSLLLLSGVLTWDDVLKEK
                     SAWDTIIWFGALIMMAAFLNKLGLIKWFSGVLAESVGGLGVSGTAAGVILVLAYMYAH
                     YMFASTTAHITAMFGAFLAAAVSLNAPAMPTALMMAAASNIMMTLTHYATGTSPVIFG
                     SGYTTMGEWWKAGFIMSVVNFLIFSVIGSIWWKVLGYW"
     gene            complement(11220..12296)
                     /locus_tag="ACFJAG_000490"
     CDS             complement(11220..12296)
                     /locus_tag="ACFJAG_000490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HFC3979870.1"
                     /translation="MICRKPIGHTPYFDMNKTICRTAALLISGFSYANTVIPDVSPVA
                     QGQHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWHIPKS
                     IQKERGDGVKTIAAGPDNPLGPVFVRLGDPKLGLGIHGTNAPASVPGIRSHGCVRMKS
                     PDALEFAKTIATGSPASVIYQMAGLNEDADRNLWLAAFRDPYGKNNLDTASLKKSIGQ
                     WAKTQGKTIAPEKVDAVLKDRTGSAVCLTCGKNGKMKMPLKSLAWIQGSSSYSQAEVI
                     EQTEETNSAEVSETRTPEVPDVHTPEAQAHLNTQSDGTPTAYTEPAADSSPQVESPDQ
                     AASEPVDVLFSIDVIRQGNLRLGN"
     gene            12360..12497
                     /locus_tag="ACFJAG_000491"
     CDS             12360..12497
                     /locus_tag="ACFJAG_000491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA methyltransferase"
                     /protein_id="HFC3979871.1"
                     /translation="MATETNIAEISALDYEGRGVAKVGGKTIFIKGALLDCLMLGCFR
                     L"
     gene            12519..13661
                     /gene="bioF"
                     /locus_tag="ACFJAG_000492"
     CDS             12519..13661
                     /gene="bioF"
                     /locus_tag="ACFJAG_000492"
                     /EC_number="2.3.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008710 - 8-amino-7-oxononanoate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="8-amino-7-oxononanoate synthase"
                     /protein_id="HFC3979872.1"
                     /translation="MKVFRQQLEQLGAQNQYRSIPDLIHQGRYITRENRKMLNMSSND
                     YLGLASDENLRRSFLQQYGGNFPSFTSSSSRLLTGNFPIYTDLEELVAQRFQRESALL
                     FNSGYHANLGILPALTTTKSLILADKFVHASMIDGIRLSRCAFFRYRHNDYEHLKNLL
                     EKNVGKFDRTFIVTESVFSMDGDVADLKQLVQLKKQFPNTYLYVDEAHAIGVYGQNGL
                     GIAERDNLIAEIDLLVGTFGKALASVGAYAVCNQVLKECLINQMRPLIFSTALPPFNV
                     AWTYFIFERLPQFSKERSHLEQLSAFLRREVAHRTQIMPSETCIVPYILGGNEATLAK
                     AEYLQGQGYYCLPIRPPTVPKNTSRIRLSLTADMTTDEVRQFAACL"
     gene            13671..14318
                     /locus_tag="ACFJAG_000493"
     CDS             13671..14318
                     /locus_tag="ACFJAG_000493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pimeloyl-ACP methyl esterase BioG family
                     protein"
                     /protein_id="HFC3979873.1"
                     /translation="MKTKFYNHQGEHLILYFAGWGMPPDAVNHLILPENHDLLICYDY
                     QDLNLDFDFSAYRHIRLVAWSMGVWAAERALQGIRLKSATAVNGTGLPCDDNFGIPCA
                     VFKGTLENLTENTRSKFERRICGDKASFEDYQQFPARPFDEIHQELTALFAMIGQDRR
                     TDLIRWTNALFGSGDKIFIPANQHRYWTPRCTVQETDGGHYLFSRFTHWSALWNH"
     gene            14306..15088
                     /gene="bioC"
                     /locus_tag="ACFJAG_000494"
     CDS             14306..15088
                     /gene="bioC"
                     /locus_tag="ACFJAG_000494"
                     /EC_number="2.1.1.197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010340 - carboxyl-O-methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-ACP O-methyltransferase BioC"
                     /protein_id="HFC3979874.1"
                     /translation="MESLTAINKPRIRQAFQKALSDYDRHALIQQKMTINLIAHLQDY
                     LPDMPLENVLELGCGSGMLSALLQKQISANYWLFNDLCDVRSRLAEKLPQSFDFYCGD
                     AENFPFQRQFDLIASASAVQWFHQPDAFIAHCKTGLKTNGLLAVATFGKDNLKEVRQI
                     TNIGLNYPTLSQWQAWLAKDFELLWCEDFKVILDFDTPLDVLKHLKYTGVTATNQKNW
                     TRKNLNGFIGDYLSAFGMPSGKVRLTYHPLFFIARHSAAGRQ"
     gene            15309..16746
                     /locus_tag="ACFJAG_000495"
                     /pseudo
     CDS             15309..16746
                     /locus_tag="ACFJAG_000495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243324.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
     gene            16749..17847
                     /locus_tag="ACFJAG_000496"
                     /pseudo
     CDS             16749..17847
                     /locus_tag="ACFJAG_000496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815828.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
     gene            17859..18394
                     /locus_tag="ACFJAG_000497"
                     /pseudo
     CDS             17859..18394
                     /locus_tag="ACFJAG_000497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212573.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP/GTP-binding protein"
     gene            18396..19038
                     /locus_tag="ACFJAG_000498"
                     /pseudo
     CDS             18396..19038
                     /locus_tag="ACFJAG_000498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232884.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase M23"
     gene            19059..19418
                     /locus_tag="ACFJAG_000499"
     CDS             19059..19418
                     /locus_tag="ACFJAG_000499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="roadblock/LC7 domain-containing protein"
                     /protein_id="HFC3979875.1"
                     /translation="MQQLLISILEDLNNTSTDIIASAVISTDGLPMATMLPSHLNSDR
                     VGAISATLLALGSRSVQELACGELEQVMIKGKSGYILLSQAGKDAVLVLVAKETGRLG
                     LILLDAKRAARHIAEAI"
     gene            19510..19585
                     /locus_tag="ACFJAG_000500"
     tRNA            19510..19585
                     /locus_tag="ACFJAG_000500"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:19543..19545,aa:Asn,seq:gtt)
     gene            complement(20083..20994)
                     /gene="crgA"
                     /locus_tag="ACFJAG_000501"
     CDS             complement(20083..20994)
                     /gene="crgA"
                     /locus_tag="ACFJAG_000501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator CrgA"
                     /protein_id="HFC3979876.1"
                     /translation="MKTNSEELTVFVQVVESGSFSRAAEQLEMANSAVSRIVKRLEEK
                     LGVNLLNRTTRQLNLTEEGAQYFRRAQRILQEMAAAETEMLAVHEVPQGVLRVDSAMP
                     MVLHLLAPLAAKFNERYPHIRLSLVSSEGYINLIERKVDIALRAGELDDSGLRARHLF
                     DSHFRVVASPEYLAKHGTPQSAEDLANHQCLGFTEPGSLNTWAVLDAQGNPYKISPHF
                     TASSGEILRSLCLSSCGIACLSDFLVDNDITEGKLIPLFAEQTSNKTHPFNAVYYSDK
                     AVNLRLRVFLDFLVKELGKNMNRTNTK"
     gene            21356..21811
                     /locus_tag="ACFJAG_000502"
     CDS             21356..21811
                     /locus_tag="ACFJAG_000502"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003779953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008753 - NADPH dehydrogenase (quinone)
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0050136 - NADH:ubiquinone reductase
                     (non-electrogenic) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HFC3979877.1"
                     /translation="MIDAGYDVEAEIEKFVWMDAVIWQMPGWWMHEPWTVKKYMDEVF
                     TGGHGKLYQSDGRHRVNPTEGYGTGGLLQGKKHMLSLTWNAPIEAFTREGDFFEGKGV
                     DVLYMHFHKANEFIGLSRLPTFLCNDVVKNPQVEKYLADYQAHLEKVFG"
     gene            complement(22019..23404)
                     /gene="pntB"
                     /locus_tag="ACFJAG_000503"
     CDS             complement(22019..23404)
                     /gene="pntB"
                     /locus_tag="ACFJAG_000503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008750 - proton-translocating NAD(P)+
                     transhydrogenase activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit beta"
                     /protein_id="HFC3979878.1"
                     /translation="MSSGLVTAAYIVAAILFIFSLAGLSKQETAKRGCYSGIAGMAVA
                     LFVTVFSDNTHGLGWIIIAMLIGAAIGIHKAKKVEMTEMPELIALLHSFVGLAAVLVG
                     FNSYIEPGNVSHDMHTIHLVEVYLGIFIGAVTFTGSLAAFGKLNGKISSSPLQLPAKH
                     KLNALALAVSFVLLLVFVGIDGSGFILLIMTLIALAFGWHLVASIGGADMPVVVSMLN
                     SYSGWAAAAAGFMLSNDLLIVTGALVGSSGAILSYIMCKAMNRSFVSVIAGGFGSDSG
                     ISSSGSQEIEEYREVKAADVAEMLKGASSVIITPGYGMAVAQAQYPVAEITELLRKNG
                     IEVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDFPETDVVLVIGANDTVN
                     PAAQTDPNSPIAGMPVLEVWKAKEVVVFKRSMNTGYAGVQNPLFFNENSVMCFGDAKK
                     TVDGILAELKK"
     gene            complement(23484..23867)
                     /locus_tag="ACFJAG_000504"
     CDS             complement(23484..23867)
                     /locus_tag="ACFJAG_000504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MAPEG family protein"
                     /protein_id="HFC3979879.1"
                     /translation="MTFAYWCILIACLLPLFCAAYAKKAGGFRFKDNHNPRGFLAHTQ
                     GAAARAHAAQQNGFEAFAPFAAAVLTAHATGNAGQATVNTLAGLFILFRLAFIWCYIA
                     DKAALRSLMWAGGFACTVGLFVAAA"
     gene            complement(23871..25409)
                     /locus_tag="ACFJAG_000505"
     CDS             complement(23871..25409)
                     /locus_tag="ACFJAG_000505"
                     /EC_number="7.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit alpha"
                     /protein_id="HFC3979880.1"
                     /translation="MKIGIPRESLSGETRVACTPATVALLGKLGFETVVESGAGLAAS
                     LDDAAYQTAGATVADKAAVWACPLIYKVNAPSEGELPLLKEGQTIVSFLWPRQNEALV
                     EALRAKKVNALAMDMVPRISRAQALDALSSMANISGYRAVIEAANAFGRFFTGQITAA
                     GKVPPAQVLVIGAGVAGLAAIGTANSLGAVVRAFDTRLEVAEQIESMGGKFLKLDFLQ
                     ESGGGGDGYAKVMSDEFIAAEMKLFAEQAKEVDIIITTAAIPGKPAPKLITKEMVESM
                     KSGSVIVDLAATGGNCELTRPGELSVTGNGVKIIGYTDMANRLAGQSSQLYATNLVNL
                     TKLLSPNKDGEITLDFEDVIIRNMTVTRDGEITFPPPPIQVSAQPQQTPSEKAAPAAK
                     PEPKPVPLWKKLAPAAIAAVLVLWVGAVAPAAFLNHFIVFVLACVIGYHVVWNVSHSL
                     HTPLMSVTNAISGIIVVGALLQIGQGNGFVSLLSFVAILIAGINIFGGFAVTRRMLNM
                     FKKG"
     gene            25698..26531
                     /gene="serB"
                     /locus_tag="ACFJAG_000506"
     CDS             25698..26531
                     /gene="serB"
                     /locus_tag="ACFJAG_000506"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0036424 - L-phosphoserine phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="HFC3979881.1"
                     /translation="MPQALVLQFPSAEALPSDFPSRLPEPDYADEKRMRFIVEEGFSL
                     SEKDAALLDSRQIDHAVLPNMAFGELGLIVSDMDSTLITIECIDEIAAGVGLKGKVAE
                     ITERAMRGELDFEQSLRSRVALLAGLDEQILADIYENVLKLSPGAEFLLDECKRHNVK
                     FLLVSGGFTFFTERLQQRLGFEYQHANILEIENGRLTGRLKGRIIDAQAKADLLREYR
                     SRLGLQPHQVLAMGDGANDIPILKEAGIGVAYRAKPKARAAADACINFGGLERVRGLF
                     G"
     gene            26595..27817
                     /locus_tag="ACFJAG_000507"
                     /pseudo
     CDS             26595..27817
                     /locus_tag="ACFJAG_000507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360679.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
     gene            27978..29558
                     /gene="purH"
                     /locus_tag="ACFJAG_000508"
     CDS             27978..29558
                     /gene="purH"
                     /locus_tag="ACFJAG_000508"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0003937 - IMP cyclohydrolase activity
                     [Evidence IEA];
                     GO_function: GO:0004643 -
                     phosphoribosylaminoimidazolecarboxamide formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HFC3979882.1"
                     /translation="MSVIKRALISLCDKAGAVEFAQTLHKLGVEILSTGGTAKLLAGA
                     GVPVIEVADYTGFPEMLDGRVKTLHPKIHGGILGRRDLDEHVAKMEEHGIGNIDLVCV
                     NLYPFAATIAKPGCTLEDAIENIDIGGPAMVRSAAKNWKHVAIVTDTADFPAIAAELE
                     AGNGALSDKTRFNLSRKAFSHTAEYDGMISNYLTSLSDGVLSGEPEIGEFPSRFNQSW
                     IKVQDMRYGENPHQRAAFYRDIDPAAGSLSAYNQLQGKELSYNNIADADAAWEAVKSF
                     DAPACVIVKHANPCGVAVAADTLTAYKLAYATDTTSAFGGIIAFNREVDGETVKQITD
                     NQFMEVLMAPKFTAEALEIAAAKKNVRVLEVPLKAGANRFELKRVGGGLLVQTPDINR
                     INRADLKVVSKRQPTEQEWNDLLFVWNVAKYVKSNAIVFGKGGQTYGIGAGQMSRVDS
                     TRIAARKAQDAGLDLNGACAASDAFFPFRDGVDVIAEQGIKAIIHPAGSMRDQEVFDA
                     ADEHGIAMVVTGVRHFRH"
BASE COUNT         7416 a         7398 c         7931 g         7580 t
ORIGIN      
        1 atgtccgcaa tctgaaatcc cggccgtggg ggcgacggta taaatatttc tatttcaatc
       61 caatataaaa tgccgtccga acatcgttcg gacggcattt ttaatgcttc gaatcagttg
      121 gtgccgactt tgattttctg ccacaggctg accgacagtt ttttcgcatc cgcgctcatt
      181 tgcggcatga cgaaaccgtc tttcatatcc tgctcgttcg ggaagatgga acgggtgttc
      241 accaactcgg caggcatttt ttcgcgcgcc ggtttgctgg cgggggcgaa ggttacggcg
      301 atgccgtttt tcgccgcgat ttcggggtcg agcgtgtagt tgatgtattt gtgggcgttg
      361 gcgacgtttt tcgcatcggc gggaatcagc caagactcaa tccagaagcc catacctttc
      421 ggtgtcagca cttcgatgcc gacgttgttt ttcacttctt cggaacgcgc tttcgccaag
      481 ttcaaatcgc cgccgttgcc tgccgccagg cagatgtcgc cgcgcgccag ctcgtcgatg
      541 atggacgggc tgaaacgttt gacgtccgga cggatagact tcaacacttc cgccgccgcc
      601 ttcaaatctt caggattcga acctttgggg tctttgccca agtagttcag caaaatcggg
      661 aacatttcgc tcggggtgtc ccacaaggcg atgccgcagg atttcagctt gcgggtgtat
      721 tcgggtttga acagcaaatc ccagccgttt tcgggcagct tgccgcccaa aagctctttg
      781 cccttcgccg taatcgcaac cgtgttcacg ccggagaaat aggggacggc atactggttg
      841 cccgggtcgg cggtttccag cattttcaag agttcgggat cgatgttttt atagttggga
      901 atcaggtctt tgttgacttt ttgatacgcg cccgcctcga tttggcgcgg caggaaggcg
      961 atgcccggca caaccaaatc gtaaccggat ttgccggtca gcattttggc ttccagcgtt
     1021 tcgttgtttt cgtacaagtc gtaagtcagc ttcagattgt tggctttttt aaagtcttcg
     1081 accgtactct cgtcaacata attcgaccag ttgtagatgt tcagagtatc ggtggcagcg
     1141 gcttcggcat tggcagcagg tgcgctgcct gcttgaggct gcacggcgtt tttttcgctg
     1201 ccgccgcagg ctgccagaga cagcgcggcc aaaacggcta atacggattt tttcatacgg
     1261 gcagattcct gatgaaagag gttggaaaaa aagaaaaccc cgcgccccat aaacaccccg
     1321 gcgcaaggtt tgggcattgt aaagtaaatt tgtgcaaact caaagtatat tggactgatt
     1381 tttttgaaaa tttgacactt ttgcgcccaa aggcggagga tgtgccggat tttgccgccc
     1441 gcgcgcgccg gtaaaacggc ttatgggaaa ataaagggaa aaggcttgca tataatgcaa
     1501 acccccttta aaattgcgcg tttacagaat ttatttttct ttcaggagat tccaatatgg
     1561 caaacagcgc acaagcacgc aaacgtgccc gccagtccgt caaacaacgc gcccacaacg
     1621 ctagcctgcg taccgcattc cgcaccgcag tgaaaaaagt attgaaagca gtcgaagcag
     1681 gcgataaagc tgccgcacaa gcggtttacc aagagtccgt caaagtcatc gaccgcatcg
     1741 ccgacaaagg cgtgtttcat aaaaacaaag cggctcgcca caaaagccgt ctgtctgcaa
     1801 aagtaaaagc actggcttga tttttgcaaa accgccaagg cggttgatac gcgataagcg
     1861 gaaaaccctg aagcccgacg gtttcggggt tttctgtatt tcgggggtaa agttcgaaat
     1921 ggcggaaagg gtgcggtttt ttatccgaat ccgctataaa atgccgtttg aaaaccaata
     1981 tgccgacaat gggggcggag atgaatacac gaaatatgcg ctatattctt ttgacaggac
     2041 tgttgccgac ggcatccgct tttggagaga ccgcgctgca atgcgccgct ttgacggaca
     2101 atgttacgcg tttggcgtgt tacgacagga tttttgcggc acagcttccg tcttcggcag
     2161 ggcaggaagg gcaggagtcg aaagccgtac tcaatctgac ggaaaccgtc cgcagcagct
     2221 tggataaggg cgaggcggtc attgttgttg aaaaaggcgg ggatgcgctt cctgccgaca
     2281 gtgcgggcga aaccgccgat atctatacgc ctttgagcct gatgtacgac ttggacaaaa
     2341 acgatttgcg cgggctgttg ggcgtacgcg aacacaatcc gatgtacctt atgccgtttt
     2401 ggtataacaa ttcgcccaac tatgccccga gttcgccgac gcgcggtacg actgtacagg
     2461 aaaaattcgg acagcagaaa cgtgcggaaa ccaaattgca ggtttcgttc aaaagcaaaa
     2521 ttgccgaaaa tttgtttaaa acccgcgcgg atctgtggtt cggctacacc caaagatccg
     2581 attggcagat ttacaaccaa ggcaggaaat ccgcgccgtt ccgcaatacg gattacaaac
     2641 ctgaaatttt cctgacccag cctgtgaagg cggatttgcc gttcggcggc aggctgcgta
     2701 tgctcggtgc gggttttgtc caccagtcca acggacagag ccgtcccgaa tcgcgttcgt
     2761 ggaacaggat ttatgccatg gcaggcatgg aatggggcaa attgacggtg attccgcgcg
     2821 tgtgggtgcg tgcgttcgat cagagcggcg ataaaaacga caatcccgat attgccgact
     2881 atatggggta tggcgacgtg aagctgcagt accgcctgaa cgacaggcag aatgtgtatt
     2941 ccgtattgcg ctacaacccc aaaacgggct acggcgcgat tgaagccgcc tacacgtttc
     3001 cgattaaggg caaactcaaa ggcgtggtac gcggattcca cggttacggc gagagcctga
     3061 tcgactacaa ccacaagcag aacggtatcg gtatcgggtt gatgttcaac gactgggacg
     3121 gcatctgaat accgtttcaa acggcatatc aagttgccgt gccgtctgaa gccgccggcg
     3181 gtttggcggg gcgggataaa aaattcgttt gaatccgggc aaacgcgtat aatgtgcggt
     3241 ttgtacggac tttgtcggaa tcaagcaaga tgacggaacc tgcggccgaa ggcggcaaag
     3301 ctgccaaggc gttaaaaaaa tatctgatta caggcatttt ggtctggctg ccgattgcgg
     3361 taacggtttg ggtggtttcc tatatcgttt ccgcgtccga ccagcttgtc aacctgctgc
     3421 cgaagcaatg gcggccgcaa tatgttttgg ggtttaatat ccccgggctc ggcgttattg
     3481 ttgccattgc cgtattgttt gtaaccgggt tatttgccgc aaacgtgttg ggccggcaga
     3541 ttcttgccgc gtgggacagc ctgttgggtc ggattccggt tgtcaaatcc atctattcga
     3601 gtgtgaaaaa agtatccgaa tcgctgctgt ccgacagcag ccgttcgttt aaaacgccgg
     3661 tactcgtgcc gtttccccaa tcgggtattt ggacaatcgc attcgtgtcc ggtcaggtgt
     3721 cgaatgcggt taaggccgca ttgccgcagg atggcgatta tctttccgtg tatgtcccga
     3781 ccacgcccaa cccgaccggc ggttactata ttatggtaaa gaaaagcgat gtgcgcgaac
     3841 tcgatatgag cgtggacgaa gcgttgaaat atgtgatttc gctgggtatg gtcatccctg
     3901 acgacctgcc cgtcaaaaca ttggcaggac ctatgccgcc tgaaaaggcg gagttgcccg
     3961 aacaacaata aagccgccgt tcagacggca ttttccgttt tcagtttaaa tcaataaaag
     4021 gtgattttat gcgtaccaac tattgcggcc tgatcagcga gcaatactta ggccaaaccg
     4081 ttaccgtcaa aggctgggta caccgccggc gcgaccacgg cggtgtgatt tttatcgacc
     4141 tgcgcgaccg cgaaggcatc gtccaagtcg tgatcgatcc cgacacgccc gaagcgtttg
     4201 ccgctgccga ttccgcccgt aacgaatacg ttttgggcat taccggccgc gtacgcaacc
     4261 gtcccgaagg cacgaccaac gataaaatga tttccggcaa aatcgagatt cttgccaaag
     4321 aaatcgaagt gttgaacgcc gccgctacgc cgccgttcca aatcgacgac gaaaacatca
     4381 gcgaaaacgt gcgcctgacc aaccgcgtta tcgacctgcg ccgccctgtg atgcagcgca
     4441 acctgcgcct gcgttaccaa gtcgctacgg gcgttcgccg ttatctggac gcgcaaggct
     4501 tcatcgacat cgaaacgccg atgctgaccc gctccactcc ggaaggcgcg cgcgactacc
     4561 tcgtaccgag ccgcgttcat ccgggcgagt ttttcgcgct gccgcaatcg ccgcaattat
     4621 tcaaacaact gttgatggtg gcgggtttcg accgttacta ccaaatcacc aagtgcttcc
     4681 gtgacgaaga cttgcgcgcc gaccgccaac ctgaattcac tcaaatcgac ttggaaacct
     4741 cgttcctgaa cgaggatgaa atcatggata tcactgaagg catggccaaa caagtcttca
     4801 aagatgcttt gaacgtagat ttgggcgact tcccacgcat gccttattct gaagccatgt
     4861 tctactacgg ctctgacaaa ccggacatgc gcatcaactt aaaattcacc gagttgaccg
     4921 acctgatgaa aacggaagaa ttcaaagtct tccgtggcgc agccgacatg aaaggcggcc
     4981 gcgtagtcgc tctgcgcgtg cctaacggcg ccaaattcag ccgcaaagaa atcgacgaat
     5041 acactaaatt tgtcggcatc tacggcgcga aaggtctggc atacatcaaa gtaaacgatg
     5101 cgggcaacct ctccaacggc gaagacagcg gcctgcaatc tccaatcgta aaattcttgt
     5161 ctgaaaacgc cctgaaagaa atcatcgagc gtaccgccgc gcaaaacggc gacatcatct
     5221 tcttcggtgc ggacaaagcc aaagtcgtga acgaagccgt cggcgcattg cgtatcaaag
     5281 tcggcttgga acacggcaaa gacaacggct acttcacaga cgaatggaaa cctttgtggg
     5341 ttgtcgattt cccgatgttc gaatacgacg aagaagccga ccgctacgtt gccgtacacc
     5401 atccgtttac cgcgcctaaa gaaggtcatg aagacctgat ggtttccgat cctgcaaact
     5461 gcctggcccg tgcctacgat atggtattga acggctggga aatcggcgga ggctctatcc
     5521 gtatccaccg tgcagacgta caagagaaag tgtttgccgc gctgaaaatc agccctgaag
     5581 agcaacaaga gaaattcggc ttcctcttgg acaacctgaa attcggtgcg cctcctcacg
     5641 gcggccttgc attcggcctc gaccgtctgg taacgctgat gaccggtgcc gaatccatcc
     5701 gcgacgtgat tgccttcccg aaaacacaac gcgcccaatg cctgctgacc gatgcgccca
     5761 acagcgtgga cgataagcag ttgcgtgaat tgagcctgcg tctgcgtcaa aaagcagttg
     5821 aaacaaaaga agcataagga aaacagagcc gtttgacggc tctgtttttt cagacggcat
     5881 ttacgcttct tgacttccct ctaattcaaa cctaattttg ctgtgtttta atggcggtat
     5941 tgaaaaacac atcttgttca atcaaccgat aaaaaaagga ctgaaaatga aaaaactgtt
     6001 attggccgcc gttgtttccc taaatgccgc aaccgcattt gccggcgact ctgccgagcg
     6061 tcagatttac ggcgatcccc attttgaaca aaaccgcaca aaagccgtga aaatgttgga
     6121 acagcgcggt tatcaggttt acgatgtcga tgccgacgac cactggggca aacctgtttt
     6181 ggaagtggaa gcctataaag acggccgcga atacgacatc gtgttgtctt accccgacct
     6241 gaaaatcatc aaagagcagc tcgatcgctg actcctttga tggaaagatg aaccaaaatg
     6301 ccgtctgaag cgttcagacg gcattttgcc tgttcctcat caggtatgag gcaggctttt
     6361 cttattaaaa aaatgacatt tcacgctgat ttgttataat cattcctttt caacacgaca
     6421 gacggagcag gtttattatg cctatcctta ccatccgtga agtgtgcaac attaatcatt
     6481 ggagcatagg ttattatgat gttgacgatt ccggcgaaat catcgtccgc cccaatccct
     6541 cgcaacacaa tcaaactgtt tcactgcaaa aactgactga agccgtgcaa caaaaacatc
     6601 aggcgcgcct gcctgttttg ttttgttttc cgcaaatcct cgaacaccgc ctccgcgaca
     6661 ttaaccgcgc ctttcagacg gcacgggaag agtgcggcta taagggcggt tattgtttgg
     6721 tttaccctat caaggtcaac caacaccgcc gcgtcatcga gtcgcttatg tcaagcggac
     6781 aaccgcatgg tttggaagcc ggttctaaag ccgaactgat ggcggttttg gcacacgccg
     6841 gcacccggca aacattaatc gtctgcaacg gctataaaga ccgtgaatat atccgtttcg
     6901 ccttgatggg cgaaaaactg gggcatcagg tttatttggt gattgagaag ctgtccgaaa
     6961 tacaaatggt attggaagag gcggaaaaac tcggcatcaa gccccgtttg ggtgtgcgcg
     7021 ccagactggc ttcccaaggt tcgggaaaat ggcagtcttc gggtggggaa aaatcaaaat
     7081 tcggcttgtc ggcttcccaa gttttgcaac tggtcgatat tttgaaacaa aaaaacaggc
     7141 tggactgcct gcagcttttg catttccatt tgggctcgca gcttgggaac atccgtgatg
     7201 ttgccacagg tgtacacgaa tcggctcggt tttatgttga gttgcacaaa ctgggggtaa
     7261 atatccgctg ttttgatgta ggtggcgggc ttggcgtgga ttacgaagga aaccgcacac
     7321 aatcggattg ttccgttaat tacagcctga acgaatatgc cgccacagtc gtatggggca
     7381 tcagtcaggc ttgtctcgaa cacgggctgc cgcatccgac aatcattacc gagagcgggc
     7441 gcggcattac cgcacatcac gccgttttgg ttgctaatgt tataggcgtt gaacgttaca
     7501 aaccgcgtcg gctggatgcg ccatcgcccg aagcaccgcg tgtgttgcac agtatgtggg
     7561 aaacttggac ggatatttcc gcctcgcggg aaaaacgttc cttacgcagc tggatacacg
     7621 aagggcagtt tgatcttgcc gatgtgcata atcagtataa tgtcgggctg ttgagtttgg
     7681 cgcaacgtgc gtgggcggag caactgtatt taaatatctg tcatgaagtc ggcgaattgt
     7741 ttaatgaaaa acaccggtct caccgaacca ttattgacga attgcaagaa cgttttgccg
     7801 ataagctgta tgtcaatttc tcactcttcc aatctttgcc cgatgcttgg ggcatagatc
     7861 aacttttccc tgtttgtcct attaccggtt tgaatgaacc gattgcgcgc cgcgccgtgt
     7921 tgttggacat tacctgcgat tcagacggta cgattgacca ctacatcgac ggcgacggca
     7981 tcgccggtac gatgcctatg cctgattatc ccgaagaaga gccgccgttt ttaggctttt
     8041 ttatggtggg agcatatcag gaaatactcg gcaatatgca caatcttttc ggcgacactg
     8101 ccactgctga tgttgttgta agggaagacg gacaatttac cgtcatcgat tacgatgaag
     8161 gaaacaccgt tgccgatatg ctcgaatacg tttatcaaga tccgaaagag ctgatgaaac
     8221 gctatcgcga acaaatcgaa cattcagacc ttcctgcctc gcaggctatg tctttcttaa
     8281 aagaactcga agcggggctt aatggttata cctatttgga agacgaatag acgcatcaag
     8341 gtatcggata tgtcgtctga agcccgattt tcttactcaa acaccaatca tcacgaccga
     8401 ttgaaaccaa ttacaaggaa tcattacgat gcaatacagc acactggcag gacaaaccga
     8461 caactccctc gtttccaata atttcgggtt tttgcgcctg ccgcttaatt ttatgccgta
     8521 tgaaagccat gccgattggg ttattaccgg cgtgccttat gatatggcgg tttcagggcg
     8581 ttccggcgcg cgtttcggtc ctgaagccat ccggcgcgcc tccgtcaacc tcgcttggga
     8641 gcaccgcagg tttccgtgga catttgatgt gcgcgaacgc ctgaacatta ttgattgcgg
     8701 cgacttggtt ttttcttttg gcgacagcag ggattttgtc gaaaaaatgg aagcgcacgc
     8761 cggcaaatta ctttctttcg gcaaacgctg tttgagtttg ggcggcgacc atttcattac
     8821 cctcccgttg ttgcgcgccc acgcccgcta tttcggcaaa ctcgcactga ttcattttga
     8881 cgcgcacacc gacacctacg acaacggcag cgaatacgac cacggcacga tgttttatac
     8941 cgcccccaag gaaggcctca tcgacccgtc ccgttccgta caaatcggca tacgcaccga
     9001 acacagtaaa aaattgcctt ttactgtgtt gtccgccccc aaagtcaatg aagacagtgt
     9061 tgaagagacc gtccgtaaaa tcaaagaaac cgtcggcaat atgcccgttt acctgacttt
     9121 cgacatagac tgtctcgacc cgtcgttcgc ccccgggacc ggtacgcccg tatgcggcgg
     9181 cttgagcagc gacagggcat taaaaatcct acgtgggctg acggatctcg acatcgtcgg
     9241 tatggatgtt gtagaagttg ccccctctta cgaccaatcc gacattaccg ctttggccgg
     9301 cgccacaatt gccttggaaa tgctttacct tcaaggtgcg aaaaaggact gaacgtccgg
     9361 catcccccgg gttttcgccg tgccgttcaa acggcgtatt cagtctaatg aaaattcaaa
     9421 tactgaaaca aaagttgccc ggagccgcat atcggaaaga cggtgaaata tcgtaatata
     9481 acttataaaa caattagtta aatattattt ttccgatttt tcgggacggt cttttttacg
     9541 gaggtcaata tgatgaaatt gggtttcaaa ccgatacccc tcgccattgc cgcagtattg
     9601 tgcgccctgg ttttggcact gcccgtaccc gacggggtca agcctcaggc ttggacgctg
     9661 ctggctatgt ttgtcggtgt gattgccgcc attatcggca aggttatgcc gttgggcgcg
     9721 ctgtcgatta ttgccgtcgg gttggtcgca gtaaccggcg taaccgccga caaaccgggc
     9781 gcggcgatga gcgatgcgtt gagtgcgttc gccaatccgt tgatttggct gattgccatc
     9841 gcagttatga tttcgcgcgg tttgctcaaa acagggctgg ggatgcgtat cggatatttg
     9901 tttatcgccg tttttggaag aaaaacgctg ggcatcggtt acagtctcgc tctttccgaa
     9961 ctgctgctgg ctcccgttac cccttccaat accgcgcgcg gcggcggcat tatacatccg
    10021 attatgcagt cgattgccgg cagttacggc tccaatcccg caaaaggcac agaaggcaag
    10081 atgggtaaat atttggcttt ggtcaattat cattccaatc ccatttcgtc ggctatgttt
    10141 attactgcaa ctgcccccaa ccctttaatc gtcaacttga ttgccgaaaa tttaggcagt
    10201 agtttccgtc tttcttgggg ggcgtgggcg tgggcaatgg ctgttcccgg cgttatcgcc
    10261 tttttcgtta tgcctttgat tttatatttt ttgtatccgc ctgaaattaa agaaacgccc
    10321 aatgctgttc aatttgccaa agaccgtctg agcgagatgg gtaaaatgtc ggcagacgaa
    10381 atcattatgg cggtcatttt cggtatcttg ctgctgttgt gggcagatgt tcccgccctt
    10441 attaccggca atcacgcttt tagtatcaac gccaccgcca ccgcatttat cggattaagc
    10501 ctgcttttgc tttccggtgt attgacttgg gacgatgttt tgaaagaaaa aagcgcgtgg
    10561 gatacgatta tttggtttgg cgcattgatt atgatggccg catttttaaa taaactcgga
    10621 ctgattaaat ggttctccgg agtgttggcg gaaagtgtcg gcggtttggg cgttagcggc
    10681 acggctgcgg gcgtaatcct cgtgcttgct tatatgtatg cgcattatat gtttgccagt
    10741 actactgcac atattaccgc tatgttcggc gcatttctcg ctgctgccgt ttcactgaat
    10801 gccccggcga tgccgaccgc gctgatgatg gcggccgcat ccaacattat gatgaccctc
    10861 actcattatg cgaccggtac ttcacctgtg attttcggct cgggctacac cacaatggga
    10921 gaatggtgga aggcgggttt tatcatgagc gtagtcaatt ttctgatttt ttccgttatc
    10981 ggcagcattt ggtggaaagt tctgggatat tggtaaaggg aaaaataaat ttccaatctg
    11041 tgtttatttg attgggcgac tattatcgtg aaatatgccg tctaaagcct tcagacggca
    11101 tatttgtgcg cttggatgtt gcagaaagcg gcagggcggc ggtgtaggaa aagccaaaca
    11161 aaaaccaaac cgcctgtcaa cttctgataa acataagtat taaataatca gaaggttatt
    11221 caattaccta aacgcaaatt cccctgccgt atcacatcta ttgaaaataa tacatcaacc
    11281 ggctcggaag cagcctgatc aggtgattct acttgcggcg atgaatcggc agccggttcg
    11341 gtataggcag tcggcgtgcc gtcggattgg gtatttaaat gcgcttgtgc ctcgggcgtg
    11401 tgtacatcag gcacttcggg cgtgcgtgtc tcggatactt cggcagagtt ggtttcctca
    11461 gtttgttcaa tgacttcagc ttggctgtat gaggaagaac cctgtatcca cgccagcgat
    11521 ttgagcggca tcttcatctt gccgtttttg ccgcaggtca gacagacggc cgatccggtg
    11581 cggtctttga gtacggcatc gactttctcg ggcgcgatgg ttttgccctg tgtttttgcc
    11641 cattgcccga tgcttttttt cagggaggcg gtgtcaaggt tgttcttacc gtaagggtcg
    11701 cggaaggcgg caagccacag gttgcgatcc gcatcttcat tgaggcccgc catttgatag
    11761 atgacggagg cgggcgagcc ggtggcgatg gttttggcaa actcgagcgc gtcgggcgat
    11821 ttcatgcgga cgcagccgtg actccggatg cccgggacgc tggccggtgc attggttccg
    11881 tgtatgccca aaccgagttt cgggtctcct aagcggacaa aaaccggccc caaagggttg
    11941 tccggaccgg cggctatggt ttttacgccg tcgccgcgtt ctttctgtat ggattttggg
    12001 atgtgccaaa cagggttata ggctttcgcc ccgattttat gttcgcctag attggtttgt
    12061 gtcatcgccc gacctactgc aacgggataa accttggtca gtttgccgtc ggtgtagagg
    12121 aacaggcgtt gctgagggat gttaatgaag acatgttgac cttgtgcgac gggggagaca
    12181 tcgggaatga cggtgtttgc gtatgaaaaa ccgcttatca atagtgcggc agtgcggcag
    12241 attgttttat tcatatcaaa atatggtgtg tgtccgatag gttttcggca aatcatacct
    12301 gaaaccgtac caatttgtgc gaaaatatgc gcttcggtac agtgcggacg gattgggtaa
    12361 tggcaacgga aacaaatatc gcggaaattt ccgccttgga ttatgaaggc aggggtgtgg
    12421 caaaggtcgg cggcaaaacg attttcatta aaggggcatt acttgattgt ttgatgctgg
    12481 gttgcttcag gctttaactc aggaatattt acatcataat gaaagttttt agacaacagc
    12541 ttgaacaact cggcgcgcaa aatcaatatc gttcgattcc ggatttgatt catcaagggc
    12601 ggtatattac gcgggaaaac cgcaaaatgc tgaatatgtc gtctaatgat tatttggggt
    12661 tggcatcaga tgaaaactta cgccggtctt ttttgcagca atacggcggt aattttccct
    12721 cttttaccag ttcttcatca cgtttattaa cgggcaactt tcctatttat accgatttgg
    12781 aagagcttgt cgcacaacgt ttccaacggg aaagcgcgtt attgttcaac agcggctatc
    12841 acgccaatct cggtattttg cctgctttga cgacgacgaa aagtttgatt ttggcagata
    12901 aattcgttca cgccagtatg attgacggca tccgtttgag ccggtgtgcg tttttccgtt
    12961 atcgtcataa tgattatgaa catttgaaaa atctgcttga aaaaaacgtc ggaaaatttg
    13021 accgcacttt tatcgttacc gaatctgttt tcagtatgga cggcgatgtg gcggatttga
    13081 aacagcttgt ccaattaaaa aaacagtttc ccaatactta tctttatgtg gatgaagccc
    13141 acgcaatcgg tgtttatggg caaaacggat tggggattgc cgaacgggat aatctgattg
    13201 ccgagattga tttattggtc ggcactttcg gtaaagcctt agcctcggtg ggggcgtatg
    13261 ccgtctgcaa ccaagtattg aaagaatgtt tgattaatca aatgcgccca ttgatttttt
    13321 caaccgcatt gccgccgttt aatgtggctt ggacttattt tatttttgaa cgattgccgc
    13381 aattctcaaa agaaagaagt catcttgagc agttaagcgc atttttacgg cgggaagtgg
    13441 cgcatcggac gcaaataatg ccgagcgaaa cctgtatcgt cccctatatt ttaggcggga
    13501 atgaagccac ccttgccaaa gcggaatatc tgcaaggtca gggttattat tgcctgccca
    13561 tcagaccgcc gacagtacca aaaaacacat ccagaatccg cctgtcttta actgccgata
    13621 tgacaacgga tgaagtgcgg cagtttgcgg cgtgcctgta aggatatgat atgaaaacaa
    13681 aattttacaa tcatcaaggc gaacatttaa tcctgtattt tgcaggttgg ggaatgccgc
    13741 ccgatgctgt aaatcatttg attttgccgg aaaatcacga tttattgatt tgctatgatt
    13801 atcaagattt aaatttggat tttgattttt ccgcctatcg gcacatccgt ttggtggcgt
    13861 ggtcaatggg cgtttgggcg gcagagaggg cattgcaagg aataagatta aaatccgcaa
    13921 cggcagtgaa tggcacaggt ttgccttgcg atgataattt cggtatccct tgcgccgttt
    13981 ttaaaggcac attggagaat ctcacagaaa atactcgttc aaagtttgaa cgtagaatct
    14041 gtggcgataa agcatctttt gaagattacc aacaatttcc cgcccgtccg tttgacgaaa
    14101 ttcatcaaga acttaccgca ctttttgcga tgatcgggca agataggcgt acagatctta
    14161 tccgctggac aaacgccttg ttcggatcgg gcgataaaat ttttattcct gccaatcagc
    14221 accgatattg gacaccgcgt tgcaccgttc aagaaacaga cggcgggcat tacctgtttt
    14281 caagatttac ccattggtcg gcactatgga atcactgact gccataaata aaccgcgcat
    14341 tcggcaggct ttccaaaaag cattaagcga ttatgacagg cacgccttaa tccaacaaaa
    14401 aatgacgatt aatctaatcg cgcatttgca agattatttg ccggatatgc cattggaaaa
    14461 cgtgttggaa ttgggctgcg gctcaggaat gttgagtgcc ttgctgcaaa aacagatttc
    14521 agcgaattat tggttattta atgatttgtg cgatgtacga agccgactgg ctgaaaaact
    14581 gcctcaatcc tttgattttt attgcggcga tgcggaaaat tttccttttc aacgacaatt
    14641 tgacttaatc gcaagcgcat ctgccgtgca atggtttcac caacccgacg cttttatcgc
    14701 ccattgcaaa acaggcttga aaacaaacgg attattggcg gttgcgacct ttggcaaaga
    14761 caatttaaaa gaagtccgcc aaatcacaaa tataggctta aattacccga ctttatccca
    14821 atggcaggct tggttagcca aagattttga gcttttatgg tgtgaggatt ttaaggtaat
    14881 actagacttt gatacgccgt tagatgtact caaacacctt aaatatacag gcgttaccgc
    14941 cacgaaccaa aaaaattgga caagaaaaaa tctcaatgga tttattggcg attacttgtc
    15001 ggcgttcggt atgccgtcgg gcaaagtgcg cctgacttat catccgttat tttttatcgc
    15061 gcgccactct gcggcgggca ggcaataagg cagcttatgg gcaaagttat ttttatatcg
    15121 ggtattgata ctgatgtggg taaaaggtaa tatggcgagc cttatgcaga aggcatattg
    15181 tcaaacgtta aattatggta tgatttaaaa tttacaagtc tatttcagta aatcgttaat
    15241 aataaaagcg gacaattggc cgttgcgggc ggtcagctat ccgctcgtta cggtatcggg
    15301 ggtttccttt ggaaaactca ttaattatcg gtctggcact ggcggtattg ctgatgcttt
    15361 tggttatgcg tgcgaagcag ggtaagaaaa caccgaagcg caaatcccaa ggtgtcggca
    15421 atacgcaggg gcagccgccc ggaagcaatg attcggactg ggtcgatcag acttggtcaa
    15481 tcggtttcag acggcacgca actcgactgg tcttggaacg aaagtgccga gaccgcatcc
    15541 gccgccgtat ccgcgcaaga agtcgatccg cttacggagt atcaggttta taagcaattc
    15601 ggttatcagg gcaaggctgc cgaatctttg gctgcctatc tggacggcat tccggatggt
    15661 aaagcgaaac ctgagaacct tatccgcgag ctgatcgata tcaatctcga agtgggggat
    15721 gtcgatgttt tggcagacaa tctgcaaaaa tacggcagac tgattccttt cgaacttttg
    15781 gcaaaatata tcgaacaggc attacagcga gattcaaacc atttgcgtat ccgcgtcttg
    15841 gcggaagaag gtttgggata gggcactcag gagattgaaa aacgtgcgga aggcggttct
    15901 gcgacggcag cttccgcatc gcccccgccg gatgtcggcg gtaaggctta tggagccgaa
    15961 gaaatcaagc gcatcccgat tgtgcggggc aaaaaagacg tgtccggaat cagccaagag
    16021 aaaatcggtg cgattgccgg cctggtccgc gccgatcaag gtgcgaaaat ccttaaagac
    16081 aaagtcagcc acgaaacggc atcgaaacaa tacgaccgtg ccatccaaac ttccgaaaaa
    16141 cctgcaaacc tgattatcga tgcgttgaaa ctcgattacc aacacgcgga catagaccgt
    16201 tttgccggac atttgtggaa actttaccaa acgttgggca actacggcag gcaggttaaa
    16261 gagcggatgc tgggttaggg gtacagcctg ggttaccatg aagttttcga tgatttggaa
    16321 aaggggccga acgatcggca aatcaaagac atcggtatga ggcacgggta tctgccgaaa
    16381 aatatacaga aattcaaagc gcaacatcgg gatttggtgc ttcaagattc ttcgttgatc
    16441 aacactggtt cgtctccggc agacgatgcg gttaaagaag tagagtcgtt gctgatgtat
    16501 ggtcagattg aagcggcaat ggatgtgttg gagcaggcgg tattgaaata tcccgacgaa
    16561 tcccagcttt atattacgtt gatcgatatt tatgaacgta ctgaagattg ggataggttg
    16621 gggcagtttt taagggtatt gagggaacgt gcggacaggc ttcctgaaga ggtcgttatg
    16681 ctgatgagcc ggctgctgca gcgtatgaat caaaatatta aaaaaataaa acggtacgga
    16741 aaataaaaat ggaagttcaa ctgccgaaaa ttaaaacagt acgcgtaatg ttggcgggga
    16801 tgacggcgca gcaggaatcc gttttcaaaa tggcattcaa aatgcacaat accacccgtt
    16861 atgaaacagt atccccttca gacggcagtg ccgtgcccga tttggttttg gcggataccg
    16921 atgccgaggg cggttttgaa ctttggaaag agcttgccgg gcgttataag gctatacccg
    16981 tcgccgtctg ttcggagaaa gttcccgatt ctgaagttcc ctacctgccc aaaccgattc
    17041 ggtttgaaac attgtttcct atgctccgca agttattgca gggcgagaat gtttatggga
    17101 aatcgtttat tgcacccgca gaccggtcgg cgaaaaacaa cgggaatgtg cagcgtacgg
    17161 ttacgatacg ccagtttaac ccgaataaag gattattggg ggcgttgcgg tttgcggaaa
    17221 agaacaggca ggacatcgct atcttgcatg gaaataagcc ggtccttaat tgttttcccc
    17281 tcgatacaac gggttttgct gacagaaagt gtgtaaaaac tcgaagaatt gtgcaaagac
    17341 gaaaatttgc aggtcagttg caagactgtt cccgataact cgcaatggcg cgaaaaggct
    17401 aaagtaggca ttatgtcctg tatgtggcag ttttccattt ggacggcgca ggacaggttg
    17461 atttatccga tttttcccga tactccgttt acgttgaaat cttggccaaa cctgacccgg
    17521 taggcaaatg tgccggggtc gatacgcttg tcggcatttt tgaccaaggc atccgtcaac
    17581 cttaacgtgt tgtataaagt gatgccttta aacctcaatg atattctgaa ttatcttgcg
    17641 gcaacctata caaccgggtt tttgtcggta gatttgaaaa cggtttcaca acaggcatac
    17701 tccgatatgg cggataaaat aaatatcggg gccgattctg cttctgatag tgaaatgatg
    17761 aaaaaagcgg aaaaaatcac gacaccatcc caatcccagt cgcgcggcct tctgcaaaga
    17821 ctgatgaaaa aactgttggg cagctaagag gcggagagat gagagaaaat aaaattattt
    17881 tcacaggacc tgtcggcgta gggaaaacca ctgccattgc ggctatttcg gacgaagcac
    17941 tcgtccagac cgatgcttcc gcatccgaca tgactttgga taggaaaagg aatacgacag
    18001 tggcgatgga ctacgggcca tcagcttgga tgaggatacc aaagtccatt tatatagtac
    18061 gcccggtcag gaacggttca actttatgtg ggaaatctta agccaaggca gtatgggttt
    18121 ggtattgctt ttagataatg cccgaaccaa cccgttgaaa gatttggaat tctttttaca
    18181 ttcgtttcga gggctgctgg agaaggcatc cgtcgttgtc ggtattacca agatggatat
    18241 acgctctcag cccggtatcg acgtgtatca caaatatctt gcaaaacata atcttaatgt
    18301 tccggttttt gaaattgatg cccgtaagga agatgacgta aaacaattgg ttagcgcaat
    18361 gttattttct attgatccgg gactggaggt ttaatatgga atcaacactt tcactacaag
    18421 cgaatttata tccctgcctg actcctgccg gtgcatttta tgccgtatcc agcgatgccc
    18481 ccagtgccgg taaaactttg ttgcgcagcc tgttgaaagc ggatgcggac gaagtggtca
    18541 gcagtgagaa gctgctcgcg ggcggacacc gccgacatcg ataccgcttt gaacctgttg
    18601 taccgtttgc aaaaactcga attcctctat ggcgatgaaa acggtcattc agacggcatc
    18661 aatttgtcgg acgagcaatt gccgttgctg atggaacaat tgtccggcag cggtaaggca
    18721 ttattggtcg atcggaacgg tctgtatctt gccaacgcca atttccatca tgagtcggcg
    18781 gaagagttgg ggttgttggc ggcagaagtc gcacagatgg aaaagaaata ccggctgctg
    18841 attaggaaca acctgtatat caacaataac gcttggggcg tttgcgatcc ttccggtcag
    18901 agcgaattga catttttccc attgtatatc ggttcaacca aatttatttt ggttatcgcc
    18961 ggcattcccg atttgagcaa agaggcattt gttactttgg taaggatttt ataccgccgt
    19021 tacagcaacc gcgtgtaaaa cttgggacag gagggattat gcagcaatta ttgatttcaa
    19081 tccttgaaga tttaaataat acatctacgg atattatcgc gtctgccgtt atctcaaccg
    19141 acggattgcc gatggcgaca atgcttcctt cacatttgaa ttcggacagg gtaggggcga
    19201 tttctgccac tttgcttgct ttggggagtc gctcggtgca ggaactcgcc tgcggggaat
    19261 tggaacaagt gatgattaaa ggaaaatcag gctatatcct tttaagtcag gcgggtaaag
    19321 atgccgtgtt ggtgctggtg gcaaaagaaa ccggcagact tggtttaatc ctattggatg
    19381 ccaaacgtgc ggcaaggcat attgcggaag ccatataaca tataaagatt gcgggcttgc
    19441 agataagtgc aatcgattgt caatttatat tgacacgttc ggtatttctg ttttattatt
    19501 cgcgtttact ccccgatagc tcagtcggta gagcgacgga ctgttaatcc gcaggtccct
    19561 ggttcgagcc caggtcgggg agccaaattc caaaaccctc taagtatttt cttagagggt
    19621 tttgttttac cggcggtcag aaacgcattt ttgagatgat tgttttgaga tggaataaaa
    19681 tctttgcaaa attcctttcg tgatggttat gaaaaataaa tttctaaaga tttaattggt
    19741 tatttttata attttgaaat ttatcggttt tgtaaaggtc tcgggataag caatttcggt
    19801 cttcggcgcg tcttttacgc caaacccata agaattttga gggtaatctt catcgttttg
    19861 cctgaattgc cgacgcaaag cgatttatcg gcggttgtgt ttgagcgttt gattgcagct
    19921 tgcccaatct caaatatttc taaataccaa ttgaaattca atattttata aaaacactga
    19981 tttggaacga acagatttat aaaaattccg tgtatccttg agtaagggag ttgattgaaa
    20041 agacttgttt gattgatgat gaagaataag ttaattaatg tcttatttgg tattcgttct
    20101 attcatattt tttcccagtt ccttcactaa aaaatccaaa aatacgcgta agcggaggtt
    20161 gacggcttta tcgctgtaat aaacagcatt aaaggggtgt gttttattgg aggtttgttc
    20221 ggcgaatagg ggaattaact ttccttcagt gatgtcgttg tcaaccaaaa aatctgataa
    20281 gcaagcaata ccgcaacttg aaaggcacaa cgagcgtaag atttcaccgc tgctggcggt
    20341 aaagtgcggt gaaattttat agggatttcc ctgcgcatct aaaaccgccc atgtatttag
    20401 agaaccgggt tctgtgaagc ctaaacattg atggttggca agatcttctg cagattgtgg
    20461 cgtgccgtgt tttgctaaat attcaggact ggcgactacg cggaagtggc tgtcaaacag
    20521 atggcgtgca cgcagcccgg aatcgtccaa ttctccggcc cgtaaggcaa tatcgacttt
    20581 gcgttcaatc agattgatat agccttcgga agaaacgagc gaaagtcgga tatgcggata
    20641 gcgttcgttg aattttgctg ccagcggcgc cagcagatgc agcaccatcg gcatcgcgga
    20701 atccacgcgc aacacgcctt gcggtacttc gtgcactgcc agcatttcgg tttccgccgc
    20761 tgccatttct tgcaggattc tctgcgcgcg gcggaaatat tgcgcgcctt cttccgtcag
    20821 attgagttgc cgcgtggtgc ggttgagcag gttcacgccc aacttttcct ccagccgttt
    20881 gacgatgcgg cttacggcag aatttgccat ctccaactgc tccgccgcac ggctgaagct
    20941 gccgctttcc accacttgaa caaatacggt cagttcttct gaattggttt tcatcgtgtt
    21001 tccttttcgg ttggaacccc accctttagg gcggcaggat cagactttat ttgggaaggg
    21061 cgtaacccct tcccaatcag gacggcacat agggagacga tttatgtgtc atcccgtgtg
    21121 ttgaaacatc tgattattcc atttgacgca aaagtgtttt cttatttttg cacttttaaa
    21181 tcataaagta aaacggtaca atacattcat caattcacaa acgaggtaac aaatgaatat
    21241 tttattatta gacggcggca aagcgttcgg acattctcac ggcgggttaa accacacgct
    21301 tcacaaaaaa gcgaaagaag ttttgaccgc gctcggacac aatgtttaag aaaccgtgat
    21361 tgatgccggc tatgatgttg aggcggaaat cgaaaaattc gtttggatgg atgctgtgat
    21421 ttggcagatg ccgggctggt ggatgcacga gccttggaca gtgaaaaaat atatggacga
    21481 agtctttacc ggcggacacg gcaaactcta ccaaagcgac ggcagacacc gcgtcaatcc
    21541 gactgagggc tacggcacag gcggcttgtt gcaaggcaaa aaacatatgc tttcactgac
    21601 ttggaatgcg ccgattgaag cctttacccg cgaaggcgat ttctttgaag gcaaaggcgt
    21661 tgatgttttg tatatgcact tccacaaagc caacgagttc atcggcttga gccgcctgcc
    21721 gacattctta tgtaacgatg tggttaaaaa tccgcaagtg gaaaaatact tggcagatta
    21781 tcaggcacac ttggaaaaag tgttcggcta attaaaaatc catcttcaac acggagatgg
    21841 attttgtttg tttcgttgat tttgtgtcag tttcagatgt gggtgcttat ccggacgggt
    21901 cgtctgaaaa tgtttgcccc aatgcaaaaa aatcactgca aaccttcaca aacggggctg
    21961 gtagtgattt tttcaaatca aacagattga aaacctgcgc cgaattgttc agacggcatt
    22021 attttttcaa ttccgccaaa atcccgtcaa cggttttctt cgcgtcgccg aaacacatca
    22081 cgctgttttc gttgaagaac agcgggtttt gtacgcctgc gtagccggtg ttcatcgagc
    22141 gtttgaatac gacgacttct tttgccttcc atacttctaa aaccggcata cctgcaatcg
    22201 ggctgttcgg atcggtttgg gcggcagggt tgacggtatc gttcgcacca atcaccaaga
    22261 ccacatcggt ttcggggaag tcgtcgttga tttcgtccat ttccaaaaca atgtcgtagg
    22321 ggactttggc ttcggcgagc agtacattca tatgaccggg caggcggccg gcgacggggt
    22381 ggatgccgaa gcgtacttcg atgccgtttt tacgcaaaag ctcggtgatt tcggcaacgg
    22441 ggtattgtgc ctgcgccact gccatgccgt agcccggggt gataatgacg ctgcttgcgc
    22501 ctttcagcat ttcggcaaca tcggcagctt tgacttctcg gtattcctct atctcttggc
    22561 tgccggaaga cgatatgccg ctgtcgctgc cgaaaccgcc ggcaatcacg gaaacaaacg
    22621 accgattcat ggctttgcac ataatgtagg acagaattgc gccgcttgag ccgaccagcg
    22681 cgccggtaac gatgagcagg tcgttggaga gcataaagcc tgccgctgcg gccgcccagc
    22741 cggagtagga gttgagcata gatacgacca cgggcatatc cgcgccgccg atggaggcaa
    22801 ccaagtgcca gccgaatgcg agggcgatca gggtcataat cagaaggatg aagccgctgc
    22861 cgtcaatgcc gacaaatacg agcagcaaca caaacgatac ggcgagcgcc agtgcgttga
    22921 gcttgtgttt ggcgggcagt tgcagcgggc tgctgctgat tttgccgttg agtttgccga
    22981 atgcggccag tgagccggta aaggttaccg cgccgatgaa aatgcccaaa tagacttcga
    23041 ccagatggat ggtgtgcata tcgtgcgaaa cgttgcccgg ctcgatgtag ctgttgaagc
    23101 cgaccaaaac ggctgccaag ccgacgaagc tgtgcagaag tgcaatcagt tcgggcattt
    23161 cggtcatttc tacttttttg gctttgtgga tgccgattgc cgcgccgatg agcatggcga
    23221 tgataatcca gcccagtccg tgggtattgt cggaaaagac cgttacgaag agggcgaccg
    23281 ccataccggc gataccggaa tagcagcccc gtttggcggt ttcctgtttg gacagccccg
    23341 ccagtgagaa gatgaataaa attgcggcaa cgatatacgc cgctgttacg agtcctgaag
    23401 acatggaaat tctccgattt tcgatgattt gttttcaatg ccgtctgaaa aattgacgtt
    23461 cgtgttttca gacggcatct gtttcaagca gccgcgacaa acagtccgac ggtgcaggca
    23521 aatccgcccg cccacatcag cgagcgcaat gctgctttgt ctgcgatgta gcaccagata
    23581 aaggcgaggc ggaacaggat gaacaatccg gcaagcgtgt tgacggttgc ttgtccggca
    23641 ttgccggttg cgtgtgccgt caaaacggcg gcggcaaacg gtgcaaaggc ttcaaaaccg
    23701 ttttgctgcg cggcgtgggc acgggcggct gcgccttgcg tatgtgccag aaaaccgcga
    23761 ggattgtggt tgtctttaaa ccggaatccg cctgcttttt tggcatacgc cgcacaaaaa
    23821 agcggcaata ggcaggcaat cagaatgcac caataggcga aagtcatggc ttaccctttc
    23881 ttaaacatat tcagcatacg ccgtgtaacc gcaaagccgc cgaagatatt gatgccggca
    23941 atcaggatgg caacaaacga cagcagcgaa acgaagccgt tgccctgacc gatttgcagc
    24001 agcgcgccga cgacgatgat gccggagatg gcgttggtta ccgacatcag cggtgtgtgc
    24061 agcgagtggc tgacgttcca aacgacatgg tagccgatga cgcaggcgag gacgaagacg
    24121 ataaagtggt tcaagaatgc tgcgggtgcg accgcgccga cccacagcac caatacggcg
    24181 gcgatggcgg cgggcgcgag ttttttccac aggggaacag gtttcggctc gggcttggcg
    24241 gcaggcgcgg ctttttcaga cggcgtttgc tgcggctggg cggaaacctg aatcggcgga
    24301 ggcgggaagg tgatttcgcc gtcgcgggta acggtcatat tgcggataat cacgtcttcg
    24361 aagtccagcg tgatttcgcc gtctttgttc gggcttaaca gcttggtcag gttcaccaag
    24421 ttggtggcgt aaagctggga agactgtccg gcaaggcggt ttgccatgtc ggtgtagccg
    24481 atgattttca cgccgttgcc ggttacggac aattcgcccg gtcgggtgag ttcgcagttg
    24541 ccgcccgtcg ccgccaaatc gacgatgacg gatccggatt tcatgctttc caccatttct
    24601 ttggtaatca gcttgggagc gggtttgccc ggaatggcgg cggtggtgat gatgatgtcc
    24661 acttctttcg cctgttcggc aaagagcttc atttcggcgg cgataaattc gtcgctcatc
    24721 actttggcgt agccgtctcc gccgccgccc gattcttgca ggaagtcgag tttcaggaac
    24781 ttaccgccca tcgattcgat ttgttccgcc acttccaagc gggtatcgaa cgcgcgcacc
    24841 actgcgccga gcgaatttgc cgtaccgatt gccgccaaac ccgccacacc tgcaccaatc
    24901 accaaaacct gcgcaggcgg cactttgccg gcggcggtga tttgaccggt gaagaaacgg
    24961 ccgaaggcgt tggcggcttc aatcacggcg cggtagccgc tgatgtttgc cattgaagac
    25021 aaagcgtcca aggcctgagc gcgggaaatg cggggaacca tgtccatcgc cagcgcgttg
    25081 actttcttgg cgcgcaaggc ctcgaccaaa gcctcgtttt ggcgcggcca caggaagctg
    25141 acgatggttt gaccttcttt gagcagcggc agctcgcctt cggacggcgc gttgacctta
    25201 taaattaaag ggcaggccca aaccgccgct ttgtcggcaa cggttgcgcc tgctgtttgg
    25261 taagcggcat cgtccaaact tgccgccaaa cctgcaccgc tttcgacaac ggtttcaaag
    25321 cctagtttgc ccagcagggc aacggtggcg ggcgtgcagg cgacgcgggt ttcgccggat
    25381 aatgactcgc gtgggatacc gattttcatc tctgaatcct ttttcgggtt gttcatatgt
    25441 atcgtgggtt aaatttaaat cggtgcaggg cggagcaacg ccgtaccggt ttaaaaccga
    25501 ttcacttcaa atgttaatat attttagata atccccttat aacgaatttt catcaggctg
    25561 gcaatagttg cgcattttcc cgtgttgtcc gacacatact gccgtttgcg tttgaagtcg
    25621 ttttccgatt gcaggcacgc ccgccgtaac attctttgcc gtttcactat ataatccgca
    25681 ttttttgagc cgccgttatg ccgcaagccc tcgtcctcca atttccctcc gccgaagccc
    25741 tgccttccga cttcccctca cgcctgcccg aacctgatta tgctgatgaa aagcgtatgc
    25801 gttttattgt tgaagaagga ttttctttaa gcgaaaaaga cgcggcgtta ctggacagcc
    25861 gtcaaatcga ccacgccgtt ttgcccaata tggcgtttgg cgaactcggg ctgattgtca
    25921 gcgatatgga ttcgacgctg attaccatcg aatgtatcga tgaaattgcg gcaggtgtgg
    25981 gtttgaaagg caaagtagcg gaaattaccg agcgcgccat gcgcggagag ttggatttcg
    26041 aacagtcttt acgcagccgc gttgcgttgt tggcgggatt ggacgaacag attttggcgg
    26101 acatttatga aaacgttttg aagctctcgc ccggtgcgga atttttgttg gacgaatgca
    26161 aaaggcacaa tgtgaaattc ctgctggtgt ccggcgggtt cacgtttttt accgaaaggc
    26221 tgcaacaacg gctcggcttc gaataccaac acgccaatat tttggaaatt gaaaacggca
    26281 ggttgaccgg ccgtctgaaa ggcagaatca tcgacgcgca ggcaaaggcg gatttattgc
    26341 gcgaataccg cagccgcctc ggattgcagc cgcatcaggt gttggcgatg ggcgacggtg
    26401 cgaacgatat tccgatactc aaagaagcgg gcataggcgt ggcttaccgc gccaaaccga
    26461 aagcgcgggc cgccgccgat gcctgtatca acttcggcgg tttggagcgt gtacgcggcc
    26521 tgttcggata ggcggatagg aaacggatgc cgtctgaaag gttttcagac ggcatttgaa
    26581 cggcaggaac gacagtggga cgcagaaaac tttggtttgc cctggcggca gcaggcgtta
    26641 tcggcggttt ggtcggcatt gtgctgacgg aactgatgca cttcatacgg catacggcat
    26701 acggttatga cgcggacggt gcgtacatct cgttccgcga aggtgtggca caggctttcg
    26761 gtatgcggcg cgttgccatg ctgacgctgt gcggcgcgat cgcaggcggc ggctggtggc
    26821 tgctcaaacg tttcggcaag ccgcaaatcg aaatcaaagc cgccttgaag cagccgttgc
    26881 aggggctgcc gtttctgacg acggttttcc atgttctgct gcaaatcata acggtcggac
    26941 tcggttcgcc gctcggacgc gaagtcgccc cgcgtgaaat gactgccgcg tttgcttttg
    27001 ccggcggcag gcggttgggt ttggacgaag gcgaaatgcg cctcttgatt gcctgtgcgt
    27061 ccggagcggg tttggcggcg gtgtataacg tgccgctcgc ctccacgctg tttatcctcg
    27121 aagcgatgtt gggcgtgtgg acgcagcagg cggttgccgc cgcattgctg acttccgtca
    27181 tcgccaccgc cgtcgcgcgc atcggcttag gcgacgtgca gcagtatcat cccgccaacc
    27241 ttgccgtaaa tacttcattg ctttggtttt ccgccgtcat cggcccgata cttggcgcaa
    27301 ccgccgtctt tttccggcgc accgcccaaa aattcccctt catcaagcgc gacaatatca
    27361 aaatcattcc cttggccgtc tgtatgtttg tactcatcgg tgtgattgcc gtttggtttc
    27421 ccgaaatttt gggcaacggc aaagcaggca accaactgac ttttggcggt ttgaccggct
    27481 ggcaatacag ccttgagttg accgctgtca aatgggcggt cgttttgatg gcgctggcgg
    27541 caggcgcata cggcggactg attacgccgt ctatgatgct cggcagcacc atttcttttg
    27601 cagccgccgc cgcgtggaac agcgtcttcc ccgaaatgcc gtctgaaagc gcggcagtcg
    27661 tcggagcggc ggtgtttctc ggcgtatcgc tcaaaatgcc gctgaccgcc attgtgttcg
    27721 tattggaact gacctacgcg ccgctgtccc tgctgctgcc tttgtgcatc ggcatggcgg
    27781 ggcattggga acatcgggaa aaatgggctt caaatgaatg ccgacaaatg ccgtctgaaa
    27841 ggtttccaga cggcatttct ttgcaaattg tcaacaatat ctgcaaaaac ctactgccaa
    27901 aaaactgaaa atagcggata ataccgcccc gaaaaagatc ccctttcacc atccaaccgt
    27961 cagaaaagga agccccaatg tccgtcatca aacgcgccct gatcagcctg tgcgacaagg
    28021 caggcgcggt cgaatttgcc caaaccctgc acaagctcgg tgtcgaaatc ctctccaccg
    28081 gcggcacggc gaagctgctt gccggtgcgg gcgttcccgt gattgaagtc gccgactata
    28141 ccggtttccc cgaaatgctc gacggccgcg tgaaaaccct gcatcctaaa attcatggcg
    28201 gcatcctcgg tcggcgcgat ttggacgaac acgtcgccaa gatggaagaa cacggcatcg
    28261 gcaacatcga ccttgtgtgt gtcaatcttt accccttcgc cgccaccatc gccaagcccg
    28321 gctgcacact ggaagacgca attgaaaaca tcgacatcgg cggcccggcc atggtgcgtt
    28381 ccgccgcgaa aaactggaaa cacgtcgcca tcgttaccga taccgccgac ttccccgcca
    28441 ttgccgccga actcgaagcc ggcaacggcg cgttgagcga taaaacccgc ttcaacctct
    28501 cacgcaaagc attcagccac accgccgaat acgacggcat gatttccaac tatttaacct
    28561 cgctttcaga cggtgttttg agcggagagc ctgaaatcgg cgaatttccg agccggttca
    28621 accaaagctg gattaaagtg caagacatgc gctacggcga aaacccgcat cagcgcgccg
    28681 cgttttaccg cgatattgac cccgccgcag gcagcctttc cgcctacaat caactgcaag
    28741 gcaaagaatt gtcttacaac aacatcgccg atgccgatgc cgcttgggaa gccgtcaaat
    28801 cctttgacgc gcccgcctgc gtgatcgtga aacacgccaa tccgtgcggc gtagccgttg
    28861 cagccgatac cttgaccgcc tacaaactcg cctacgccac cgacaccacc agcgcgttcg
    28921 gcggcatcat cgccttcaac cgcgaagtag acggcgaaac cgtcaaacag attaccgaca
    28981 accagtttat ggaagtcttg atggcgccga aattcaccgc cgaagccctt gaaatcgccg
    29041 ccgccaagaa aaacgtgcgc gtattggaag tgccgctcaa agcaggtgcc aaccgctttg
    29101 aactcaaacg cgtcggcggc ggactgttgg tacaaacccc cgacatcaac cgcatcaacc
    29161 gcgccgattt gaaagtcgtc tccaaacgcc aaccgacaga gcaggaatgg aacgatttgc
    29221 tgtttgtctg gaacgtcgcc aaatacgtca aatccaacgc catcgtgttc ggcaaaggcg
    29281 gtcaaaccta cggcatcggt gcaggccaaa tgagccgcgt ggacagcacc cgcatcgccg
    29341 cccgtaaagc gcaagatgcc ggtctcgacc tcaacggcgc gtgtgccgca tccgatgcct
    29401 tcttcccgtt ccgcgacggc gtggacgtga ttgccgaaca gggcatcaaa gccatcatcc
    29461 atccggcagg ctcgatgcgc gatcaggaag ttttcgacgc ggcggacgaa cacggcatcg
    29521 ccatggtggt aacgggtgtg cgccacttcc gccattaagg cagacgaaca aggcaatgcc
    29581 gtctgaaggg ctttcagacg gcattttgcg ccatttaccg taatcctgaa accccccatt
    29641 cccgcgcagg caggaatcta gatgagaatc catcctgtca gaaatacccg aatcgtcagg
    29701 aatacccgtg tcatcattcc cgatacaccg taatcctgaa acccgtcatt cccgcgcaga
    29761 cagaaatccg gatttgtccg cgcggaaact tatgcgccgc cattcccgcg aaggcgggaa
    29821 tccggaccgt tcggtttcgg ttatttccga taaattcctg ctgcttttca ttcctagatt
    29881 cccactttcg cgggaatgac gaaggagtgg gaatccggtt tttgagttcc ggccatttcc
    29941 gacaaattgc tttggcattg gatatttcct attttaatcc actatagtgg attaacttta
    30001 aaccagtacg gcgttgcctc gccttagctc aaagagaacg attccctaag gtgctgaagc
    30061 accaagtgaa tcggttccgt actatttgta ctgtctgcgg cttcgccgcc ttgtcctgat
    30121 ttttgttaat ccgccatatc cgatcgccgc accggaattt taaaaaataa atacattctt
    30181 taacaaaaca aatcatatcc cggcaaaaca aatctgataa aatacttggc gttgattaac
    30241 aatcttttta ataatttaat cttagatatt cggagttgat atgcatacgg ccgacaaaaa
    30301 acttctcttc tcttctcttc tcttc
//
LOCUS       DAXFZM010000013        29129 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.013, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000013 DAXFZM010000000
VERSION     DAXFZM010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 29129)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29129)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29129
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.013"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..1498
                     /gene="trbL"
                     /locus_tag="ACFJAG_000509"
     CDS             <1..1498
                     /gene="trbL"
                     /locus_tag="ACFJAG_000509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009291 - unidirectional conjugation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="P-type conjugative transfer protein TrbL"
                     /protein_id="HFC3979883.1"
                     /translation="YEGKIGAWEAAFYKAGLFIFWSLSSISIVMTGAQLIFQRDNISS
                     FFAEFTRLILFLGFFLWIITNGIKIATSIKDGLMKLAGQASGNGEQITPSSIVDIGFN
                     LFDKIVENSSIWDPIDSATLIVIGLVILLILAAVGINMLLMLITTYIVIYSGIIILGF
                     GSGRWTSDMAVGYLKQVLNLSLQLAAMILIIGIGQSIVQDTINTIGTPGFRELAVVLV
                     QTALLVGLVVKIPPMIGSLAGGAGSGGIGSFGVGNAIAAAMLAGAAAGAGAALKSLAV
                     EAGGLKKAFEAAKAGLGGSNGSSDSGSGKMDSAVDAVAGANAGDKSNQDGKPLTAESS
                     GNSENGSEGSTTGNSGGNPSGSSEENTISSGSSSSSGEANSTNTSASSGAEGSAEGEA
                     TSSETSQSASDSPSNNSGEATQTADTTPKTTNTGGGSPLATAMGGNKVSNWQAAKNVA
                     VGLVSSKWNNAVNNSAGGRLVKHWEDEKKKTEDPTKNPQKNPEGDDNA"
     gene            1491..2063
                     /locus_tag="ACFJAG_000510"
     CDS             1491..2063
                     /locus_tag="ACFJAG_000510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrbM/KikA/MpfK family conjugal transfer protein"
                     /protein_id="HFC3979884.1"
                     /translation="MLKKTLICILLVGSVHFAMAESLNDALNRSRSGNSNNNRPQVED
                     LFTGDVKLACEATLCLSTGNRPSECQPAIHRYFSIRHKRMGDTIRARHNFLRLCPASK
                     EQGMPELVNAIANGAGRCDARELNRINRSTYIKRVWVGSRRHGDWQEVKVPYIRNAKP
                     SYCSAYFENGWTQLGTRYVGEEKNGGKWVD"
     gene            2063..2662
                     /locus_tag="ACFJAG_000511"
     CDS             2063..2662
                     /locus_tag="ACFJAG_000511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HFC3979885.1"
                     /translation="MVYVADLPPFMQERVTCSIAAAEKYHLPPHYLLAVAERENGRPG
                     QQVHNTNGTYDVGAMQINTAYIRTLSRYGVTQSAVAQPGCYAYYLAAWRIKRHIVYDR
                     KGDIWTKIANYHSYTPKYNAIYRAAIIRLAEKWERWLAGRQGNNAKGNVPTQAVPAVR
                     TIRSQPLPKQYVSPTTVYVPRTIRVVERSPEPEPETVQN"
     gene            2917..3204
                     /locus_tag="ACFJAG_000512"
     CDS             2917..3204
                     /locus_tag="ACFJAG_000512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence factor"
                     /protein_id="HFC3979886.1"
                     /translation="MAYAIAFDLDTTVLQELYPNKRSWQNAYGDVKKTLVGLGFNHQQ
                     GSVYFGGSGVTAVSCVLAAQKLSQTYAWFKPAVSDIRMLRIEEMNDLQPAL"
     gene            complement(3293..3847)
                     /locus_tag="ACFJAG_000513"
     CDS             complement(3293..3847)
                     /locus_tag="ACFJAG_000513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HFC3979887.1"
                     /translation="MIIGYLRVSTKEQNVAAQRQVIQDKYQIERWYEDQAASGAVKAL
                     NRPEFRKMAEFVRQGDTVVVVAIDRLGRNTIDVLETVQFLQKKGVAVTSLRENFDLAS
                     PLGTAMLAIVSAFAELERSYIKERQMAGIRNAREEGKKLGRKVKVDPEEIRRWRQSEQ
                     TSISRTAAHFNVSESTVKRACKAK"
     gene            complement(3899..4330)
                     /locus_tag="ACFJAG_000514"
     CDS             complement(3899..4330)
                     /locus_tag="ACFJAG_000514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HFC3979888.1"
                     /translation="MKEKMRLITEISLIIRELSYSRRGYRPESYAAALDNLTIIGDLA
                     DILHNIEAATGNPFVQRMVDEKLRKFVTDFPAYKVRLSPFLNGCPHDLSLGAESLGKG
                     ESIADALAVPPEEVDIADIEFDRVLIEDDRWTGAYDGGNAQ"
     gene            complement(4345..5550)
                     /locus_tag="ACFJAG_000515"
     CDS             complement(4345..5550)
                     /locus_tag="ACFJAG_000515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="zeta toxin family protein"
                     /protein_id="HFC3979889.1"
                     /translation="MVKLSSDINLRDFGNNEYLSSVQDEAIRFATEQTDEILSLYSQH
                     ADTEGGRYVCADTFKELFPAFENKEDRATVNNAIHNSAAVLSSTQFDEVLKRDEPQKK
                     EVIFVTGIPGSGKTSTVKNMMMQDTTKLLFEGQLARPQSAFRKIEQCLDRGLEVIIVA
                     VSMRAERASDNTYKRFNEYGRGASIGIMADIQANLPNGLSQIRDKFGDAVKIVGINQD
                     RNSEFIDKFDDVIKMLSLGSQEQILGRLAEKIQGDFDSGKISRECFNQAKGSMDLESI
                     FAKKEYSKQRVVTNSKGVTLETKSANELWSKGEQIPVTGMKAGIYLLGQAKKAETGQT
                     YSGEIIYKDAAAVFQKTKNGLVRHNATHNEERLAKLVEIGQNVSIGSNKGKLIVKSLE
                     YSAKKSISR"
     gene            complement(5557..5742)
                     /locus_tag="ACFJAG_000516"
     CDS             complement(5557..5742)
                     /locus_tag="ACFJAG_000516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979890.1"
                     /translation="MNKVEPQESNAIRMIKEACEKNRRMMTDEAFRKEVEKRLYAGPS
                     PELLAKLRVLWAANKEQ"
     gene            complement(5776..6984)
                     /locus_tag="ACFJAG_000517"
     CDS             complement(5776..6984)
                     /locus_tag="ACFJAG_000517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="zeta toxin family protein"
                     /protein_id="HFC3979891.1"
                     /translation="MIEYTPLSAEGKARILNGFMKPRLSRTQSVEQPKIVLVGAQPGA
                     GKSKAASLAKSELRQEGGYIHVDADIMRALIPAPEGVVYSSEQTQKDAGALAISVRNS
                     AKENRRNIVEEGTFRNAASISQFIRDRKSEGYGVEMLAVATASEESVAGIFKRYEEQH
                     AKGVSQPRFVEESYHNEAMAGFKDTLSQCESSFDRVRVTNRAGDILYDSLNRRQNQYE
                     TAKDALSAYQEITPKRLKQVVKAWDEIQLQAESRSIDPIPNYLGMVKQHSEAIYQRVE
                     EIYRQERVVANSEGATLQRKSGDTWQDIEKAEAKGMKAGIHMLGTAKPAKSGREYSGE
                     IVHKDEASVFQKTDQGLIRHKAVQGMAEGKFSSLSEQVEIGQKVSIKREGNELSVKPA
                     DASLKKTMKR"
     gene            complement(6981..7235)
                     /locus_tag="ACFJAG_000518"
     CDS             complement(6981..7235)
                     /locus_tag="ACFJAG_000518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979892.1"
                     /translation="MQMQETIPGINYEVALELLGDSMRPLIQARESEFVKDKPNQAFI
                     EYCTARLEAIDMLRDSLSPEDTDIIARIFNPDDQTVGRVK"
     gene            complement(7612..8133)
                     /locus_tag="ACFJAG_000519"
     CDS             complement(7612..8133)
                     /locus_tag="ACFJAG_000519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979893.1"
                     /translation="MNMKTVQEYEIIIRLTKENGRYGAAAETVSGGLLESVPPLSAAG
                     SDALYALLHALALKNNFSGCLKEAERQESVKNIEAKIEEKMKPIELQYYSSDMSVGEF
                     NAYLTVKNLAKPTFISHVDIDEDDKMFIANLAKSIASEYKSLFHLDVNRQTIEKALLR
                     YLEVCVSCNSAQD"
     gene            8522..8638
                     /locus_tag="ACFJAG_000520"
     CDS             8522..8638
                     /locus_tag="ACFJAG_000520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001814923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline resistance determinant leader
                     peptide"
                     /protein_id="HFC3979894.1"
                     /translation="MILKYPENICMLCIPMVMHKNPSDKSIYHWDFYALLGF"
     gene            8654..10573
                     /gene="tet(M)"
                     /locus_tag="ACFJAG_000521"
     CDS             8654..10573
                     /gene="tet(M)"
                     /locus_tag="ACFJAG_000521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011117014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline resistance ribosomal protection
                     protein Tet(M)"
                     /protein_id="HFC3979895.1"
                     /translation="MKIINIGVLAHVDAGKTTLTESLLYNSGAITELGSVDKGTTRTD
                     NTLLERQRGITIQTGITSFQWENTKVNIIDTPGHMDFLAEVYRSLSVLDGAILLISAK
                     DGVQAQTRILFHALRKMGIPTIFFINKIDQNGIDLSTVYQDIKEKLSAEIVIKQKVEL
                     YPNMCVTNFTESEQWDTVIEGNDDLLEKYMSGKSLEALELEQEESIRFQNCSLFPLYH
                     GSAKSNIGIDNLIEVITNKFYSSTHRGPSELCGKVFKIEYSEKRQRLAYIRLYSGVLH
                     LRDSVRISEKEKIKITEMYTSINGELCKIDKAYSGEIVILQNEFLKLNSVLGDTKLLP
                     QRKKIENPHPLLQTTVEPSKPEQREMLLDALLEISDSDPLLRYYVDSTTHEIILSFLG
                     KVQMEVISALLQEKYHVEIELKEPTVIYMERPLKNAEYTIHIEVPPNPFWASIGLSVS
                     PLPLGSGMQYESSVSLGYLNQSFQNAVMEGIRYGCEQGLYGWNVTDCKICFKYGLYYS
                     PVSTPADFRMLAPIVLEQVLKKAGTELLEPYLSFKIYAPQEYLSRAYTDAPKYCANIV
                     DTQLKNNEVILSGEIPARCIQEYRSDLTFFTNGRSVCLTELKGYHVTTGEPVCQPRRP
                     NSRIDKVRYMFNKIT"
     gene            10692..10859
                     /locus_tag="ACFJAG_000522"
     CDS             10692..10859
                     /locus_tag="ACFJAG_000522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002319681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine-rich KTR domain-containing protein"
                     /protein_id="HFC3979896.1"
                     /translation="MCPVCGNKTRLKIREDTELKKFPLYCPKCRQENLIEIKQFKVTV
                     ITEPDAKTQSR"
     gene            complement(10919..11272)
                     /locus_tag="ACFJAG_000523"
     CDS             complement(10919..11272)
                     /locus_tag="ACFJAG_000523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001227347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HFC3979897.1"
                     /translation="MRKKEDKYDFRAFGLAIKEARLKRGLTREQVGALIEIDPRYLTN
                     IENKGQHPSIQVLYDLVSLLHVSVDEFFLPANNLVKSTRRLQIEKYMDSFTDKELSLM
                     ESLASGINEARNIED"
     gene            11553..12026
                     /locus_tag="ACFJAG_000524"
     CDS             11553..12026
                     /locus_tag="ACFJAG_000524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979898.1"
                     /translation="MPHEQMIDAFSAVIQNSLSLYEEQTPIYYYLTICGSWVLTALGI
                     LSLVSVFFTIKQKKPYRFIVPILFLWLGYESIHMPRPNLAVFYGYNLAQLSYPANENP
                     NSFLHLTDGSNPICCFIGEDEYLQAKRLGFKEYADAKAKALVDLIEMEKKSKQSD"
     gene            complement(12178..13074)
                     /locus_tag="ACFJAG_000525"
     CDS             complement(12178..13074)
                     /locus_tag="ACFJAG_000525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine modification methylase"
                     /protein_id="HFC3979899.1"
                     /translation="MFTHSVCSYPQRGNYGKSGYRGNCTGHIIRDFVESYLAPEGLFA
                     DPSIGSGTSSDVAEEMGIRFKGTDLHQGYNLLTQDFAAFLGEQANLIWWHPPYWNMIR
                     YSGNQWGDAANPWDLSQMDLEQFQEAMLLAMMNIHDATEQGGHYGILMGNMRKDGRYY
                     NLSSMVERMAAGRLVDEIIKIQHNCVSDSRQYGGKLVRIAHEKLLVFKKEIQTALYFL
                     AKAMNRVEAVTAVTWKAAVRRVLQAADGRDMGLMEIYGEMEPYAAARAENRNWQAKVR
                     QVLQDERFFLRVGKGIYALKTE"
     gene            complement(13078..13419)
                     /locus_tag="ACFJAG_000526"
     CDS             complement(13078..13419)
                     /locus_tag="ACFJAG_000526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979900.1"
                     /translation="MLYWDDVSDSFDGWMNLLRQLGGDSFINFEQDIWETARTYETVP
                     HFGNLRQHHLLERLQDTIRNRWPFLRTGFLINALDTHFYVNDELVETMRDLDAVLGCH
                     YRENEDDLKEE"
     gene            complement(13433..13747)
                     /locus_tag="ACFJAG_000527"
     CDS             complement(13433..13747)
                     /locus_tag="ACFJAG_000527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979901.1"
                     /translation="MASYTNRLTRHPNVFVEQNIWSNGELMGFSPINVMWNGRNAPTL
                     LCRYTFDGGQYYSLQVSEAAELETRGYQIVCDDLQCLKLKTAKARRSGILALILADAG
                     IE"
     gene            complement(14114..14473)
                     /locus_tag="ACFJAG_000528"
     CDS             complement(14114..14473)
                     /locus_tag="ACFJAG_000528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979902.1"
                     /translation="MSLSAENRTFYLVETGEIGYGSSALFISQSLEEAEAVVADFFKG
                     DEKLYYETDGNQPEISLGMGETQEEEYIPFLPKEPFVWTKGGSGMMGTEYVTIRKTIN
                     GYLEGAGSFRLIKSQQD"
     gene            complement(14470..15030)
                     /locus_tag="ACFJAG_000529"
     CDS             complement(14470..15030)
                     /locus_tag="ACFJAG_000529"
                     /inference="COORDINATES: protein motif:HMM:NF017736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcbK family protein"
                     /protein_id="HFC3979903.1"
                     /translation="MNRRDFLKLSAKAAALASSGGLLLLPEIVLADDSRFWKRSRVLS
                     IYRPASRERKNIKFFADGQYIQEGYKALCWMMRDVVDNHQMHAININLINLLFAQQQY
                     LRDLGRPNPELVLHSGFRTRRHNDSLEGAAKNSQHLSGNAGDFHIERASLSELAALAR
                     RFRVGGIGIYSTFIHNDIGVYREWRK"
     gene            complement(15027..15521)
                     /locus_tag="ACFJAG_000530"
     CDS             complement(15027..15521)
                     /locus_tag="ACFJAG_000530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor"
                     /protein_id="HFC3979904.1"
                     /translation="MDKDKLYRVAFFLTYHKQAREGWFWRVFGMAFDGRLRQTLQNIA
                     VDYRKTSQNQPLAFDDYLEMLLRHEEEKTGMSAERNQSEQAAVKAFQKQYGLDRRAGT
                     HAGTKTLSITITAADDDFLPAVEMGLEQVLKSLSAGETANEGGNEYGRYAFMVSGNVK
                     GRER"
     gene            complement(15530..18529)
                     /locus_tag="ACFJAG_000531"
     CDS             complement(15530..18529)
                     /locus_tag="ACFJAG_000531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5710 domain-containing protein"
                     /protein_id="HFC3979905.1"
                     /translation="MQNKKPFYEQVAEKLIEQLRQGTAPWQKPWDGGGLPDFMPHNAI
                     TGRRYRGINNLWLQAQGRKDPRWITYKQASSIGAQVRRGEKGTVVEYWQFTEEVPKTD
                     EKGQEIIGQDGKPEKETVRLERPKVFHAVVFNGEQIDGLPPLKLRPLSWNPDERAENI
                     LKNSGAVIDHRHGDRAFYSPSRDSITLPLREQFESPGAYYETALHELGHWTGHADRLN
                     RDLSHPFGSEGYAREELRAEIASLMLSQELGVSFNPGQHASYVASWIMVLQDDPMEIM
                     RAASDAEKIQGYVMAFDQVREIEQQNEAAVSISDRQNIDEASLAEEKNLINAVDKNDV
                     AAIINFMAEEKMHEGLKRFSLVISEMDDATFQNAFWQRHQKPENGESFMENLNAAKEA
                     LDEAIEQSSYRTVEEQIRQFLPEQDKESVRVVSDERVYVQIPYADREQAKMLGAKWDK
                     DQKSWYIPPGVNQEPFRKWLDSATNQAKTVTDNTPAIAKTLIDVPFREKNEARALGAK
                     WDKDQKSWYIPEGVNTALFARWMQPKQEALAEEAVPDDTPQEEAVERQVAAIQQEYQA
                     AKTEEAPAEENASRVYLAVPYEEKEEAKALGAKWDKANKSWFMESSNANLPAASKWLP
                     EKQQTQSMPAMSPVEEFADKLREMGCVVANGHPFMDGQKHRIETVGDKKGERSGFYVG
                     HLDGHPAGYIKNNRTGAEVKWKAKGYSLSPEEKAKLAAEAAQKLQMRSEQKKQAQEAA
                     VGRIKYYMESYLPVQTGTPYLNAKGIKPQPGIFTDREGQKTFIPVYNAAGELRSMQYI
                     QADGTKRFAKDSEQEGCMHVVGQQDLSKAKTIILSEGYATAASIKEATDNTVASVAAF
                     NSGNLPLVAKVLSAKYPQAQFLVAGDDDLAVEAKQGNNPGKEKALEAAKILNCRAVFP
                     VFAPGEQSSEHKAFTDFNDLAQKSKFGREGLAKQINEAIHARPANELQTLKTRGLQEE
                     ASQDRPVEQTKQQQRATTRKTASRGSR"
     gene            complement(18532..18714)
                     /locus_tag="ACFJAG_000532"
     CDS             complement(18532..18714)
                     /locus_tag="ACFJAG_000532"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979906.1"
                     /translation="MSIDIEVIAEKVADLNNPGMEVDFDPAEAEALGAFEETAMDAET
                     ARDSVADLSREVAEGA"
     gene            complement(18718..20913)
                     /locus_tag="ACFJAG_000533"
     CDS             complement(18718..20913)
                     /locus_tag="ACFJAG_000533"
                     /inference="COORDINATES: protein motif:HMM:TIGR01056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase 3"
                     /protein_id="HFC3979907.1"
                     /translation="MSRLYIAEKPEVARAIAAALGVGIERRNGYFRCSNGDNITWCYG
                     HMLALCDPEDYDSKYGNWKFEDLPIAHIPWRKKPLSDKKEQIGVIRDLLAECTEIVHA
                     GDPDDEGQLLVDELLEFLNCAKPVKRVLINDNNERSVKRALSAIEDNAKFRGLSQSAE
                     ARSVADQLYGYNMTRAYTLKAAEQGYQGVLSVGRVQTPILGLVVRRDRENQSHVKTHY
                     YHVYADLDVDGVRFTARYVPNKDQDPIDDKGRLSDPLFARQIAEAASGQPVKILAAKT
                     SAKRQSPPLPYNLLKLQADCSRKFGLKPDQVKDIGQSLKDKHRLITYHRSDCQYLNDE
                     HFDDAADVLDAVGKTASVFKNAIASADTKIKSRAFNPDKVSAHHAIIPTVKTANMDDL
                     TEDEKRVYLLIARAYIAQFWPDHEYNQTDIEAEIAGKKFVCRSNVTVKPGWMALYKND
                     QGNAETATDPEDLSVDLQMLKPGNSGRCLTAEETQFETKPRPLYTMDTLLNDLTRVAK
                     YVQNPKLRELLIEKDKGKEGEHGGIGTPATRDEILRNLLDKGFLLEKGKNIVSSEIGQ
                     QLYDALPDQAKFPDMTALWHEQQQHIVQGGLDAQRFVNSLMEYISGEVERVGREGISL
                     NVKKYPCPECGKPLRRMRGSKGFFWGCTGYKDGCKVSFSDKAGRPVLAPKKAEPSSKF
                     KCMACTHPLVRRPGKQKGTHFWGCSNYPECKQYYPDAGGKPDYSKHTKG"
     gene            complement(20916..21452)
                     /gene="traF"
                     /locus_tag="ACFJAG_000534"
     CDS             complement(20916..21452)
                     /gene="traF"
                     /locus_tag="ACFJAG_000534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="conjugative transfer signal peptidase TraF"
                     /protein_id="HFC3979908.1"
                     /translation="MRRLFDRAMLAMCLTAALLVTGYGLLYAAGFRINDTRSVAKGVY
                     RISGEAVRRGSYITFCPPDTEVFRMARRRGYIRAGFCPENYSGLMKFVAGIPGDNYRF
                     TDEGLLINGRLLGGTRPLWQDGLGQPLPVFEGEGRLKDDEYILIGNAVANSFDARYYG
                     IVRREHIRDVVKPIWIEE"
     gene            complement(21449..23338)
                     /locus_tag="ACFJAG_000535"
     CDS             complement(21449..23338)
                     /locus_tag="ACFJAG_000535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretory system conjugative DNA
                     transfer family protein"
                     /protein_id="HFC3979909.1"
                     /translation="MFRSKNKRNNAVGHQNQAQATGSGRLVNFICLVLVLLAGMGAAT
                     QYFAHQFQYHSQLGYGIGKFYMPWSILIWYGKWHGRYEQQFMTAFSIMLMVVAVGMIG
                     LLVWNIVRKNTNKAHESLHGSARWADRKDIEAAGLLAKKGEDSDGVYVGGWVDKKGTL
                     HYLRHSGPEHVLTYAPTRSGKGLGLVLPTLLSWPYSTFITDLKGELWALTAGWRKKYA
                     HNKVIRFEPASAQGSAAWNPLDEIRVGTEYEIGDVQNLATMIVDPDGKGLNSHWDKTA
                     FALLTGVILHALYKARDDGGVATLPSVDRMLSDPEKPVGDLWVEMATYPHADGRPLPV
                     ISSAGQDMLDRPEEEAGSVLSTAKSFLALYRDNVVAANVSRSDFKIKDLMNDEDPVSL
                     YIITQPNDKARLRPLVRILINMIIRLSADKMDFENGRPKVHYKHKMLAMLDEFPSLGK
                     LEIMQESLAFIAGYGIKCYLICQDLNQLKSRETGYGPDETITSSCHVQNAYPPNRIET
                     AEHLSKLTGITTVVKEQITTSGKRVSAMLGQVSRTTQEVQRPLLTADECMRMPGPVKD
                     ARGLITQAGDMVIYVAGYPAIYGRQTLYFKDPVFEARSKVPPPRHTDRTQKKTANTPS
                     AFDTL"
     gene            complement(23355..25748)
                     /gene="traI"
                     /locus_tag="ACFJAG_000536"
     CDS             complement(23355..25748)
                     /gene="traI"
                     /locus_tag="ACFJAG_000536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraI/MobA(P) family conjugative relaxase"
                     /protein_id="HFC3979910.1"
                     /translation="MIAKKIPMRKANLSSFEGLVTYLAGSQGVANRVGKVEIHNYESS
                     DLRWAVQETLAVQDQNKRSAADKTYHLMVSLAGGEFLTDEQLSRIEQSMIEALGYAEH
                     QRISVVHRDTDNLHFHVAINKVHPEKKTIHEPYNDFKILGRECRKFEEEYGLQRVQRG
                     GRGNKKIDMEEVAGIESLIGWIRRECGEQIKEAKTWEQLYHVLSDHGLEIKLRGNGFV
                     ISDGEHHVKASSVDREFSKSALEKRLGAFDQKTGVKAKPSKTYREKPLSKANVDDLFR
                     QYKEEKELQKSRRQDFFLHLAQNRDMEIGRIKEKYAFRRSLIRHSSSGIARRILYRML
                     FRQMKDEIRSVRTDYARRRAVFFEQNKGFAWADWLKHRAAEGDVRALDALRRRGKDAG
                     YKGNRFVGKESGGFAGIKVDTVTKKGTVIYAEDGMTIRDTGSVLKLAAIPDDKAVSRA
                     LEIAIGRYGKVLTIGGTRHFQDKVARIAAAKGLDVSFTDGRLNHLYQQYVKEYEYVRE
                     RTDRYRQADGTGRADGRAGQQRGGAGYAGGKPRRYRWHGYDASRNRGFHAGISGYPIP
                     KLSDSGGIGAGRGQSASAGSDSLRGMPERSLVRIQGRTQVLLPRDVSSHLEQQGSANY
                     QAVRRTIHRTGGVAEIRQMQAVVGLVAKPGKKPPGFRRGSLRGMEGLAEIKISSAAVV
                     EIPKNPEPAQENERLTPSLAPIDKYIAERQEKIDKKFDILNHRKYNPSDSGVMLFRGI
                     RNIDGQALALFQPKEVEEILVMSVTPYVSRRLSSVKLGSEVKVTPTGQIRPVKGRHR"
     gene            complement(25751..26128)
                     /locus_tag="ACFJAG_000537"
     CDS             complement(25751..26128)
                     /locus_tag="ACFJAG_000537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraJ"
                     /protein_id="HFC3979911.1"
                     /translation="MAGARKRPKYISVYVSEEEWKTIESLAKSVGLSQSAYLKLLGLG
                     YKPASVYDGEAVKALAKINADQGRLGGLIKMWLANDERLMMFDHDQLAKAIFGVLEQI
                     GEMQESMLEIVRSRRILAAKKIG"
     gene            26178..26879
                     /locus_tag="ACFJAG_000538"
     CDS             26178..26879
                     /locus_tag="ACFJAG_000538"
                     /inference="COORDINATES: protein motif:HMM:NF036299.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraK family protein"
                     /protein_id="HFC3979912.1"
                     /translation="MASLAEQDNPLSLPANKDCDVHVHHISCPNSGVQYAKDYTPNNS
                     IYRTYFDDKPPKNALSQTKNDLLYRIIVFKTILLGSFGKALSKNWQSPIEMIQMGKIE
                     KLVLAELAAMQKKGSSAGNKARFLAMQEDIKILLVDRNIPVISVWRILSEKKYVPYSY
                     ETFNRYCKMYIFKSDTTAADQTDTAQSTQEKPDSIRTDKEPPSPASEPIIAGGNTKSS
                     SGFTFNNNPDGKDLF"
     gene            26880..27605
                     /locus_tag="ACFJAG_000539"
     CDS             26880..27605
                     /locus_tag="ACFJAG_000539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraL"
                     /protein_id="HFC3979913.1"
                     /translation="MAIIHISLQAKGGVGKSFLALMLSMFYRHIERPVKIFDTDPANA
                     TLFGFPALEAEKFEIMKKDDIDKRLFDRLFSQILSATDDVIIDVGANAFIPLCSYIIS
                     NNLITMLTQEGHQVIIHTSIVGGQNLKHTVNGFDALCSQFPESTGFVIWLNPFWGEIE
                     FEGKSFEKLKVYEKHKSRIRSIIKIPEWDASLHGRDLAAMLEKQKTFDEALASEDFSI
                     FERQRLNIIKNEMFQTIETAQIV"
     gene            27613..28095
                     /locus_tag="ACFJAG_000540"
     CDS             27613..28095
                     /locus_tag="ACFJAG_000540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979914.1"
                     /translation="MDEKVKAILATIVEKNGIALSPKDPIMVVFTALEYMLSEQHAEQ
                     KALTVLFKAQVEEATGNWIQSVHQQTEELVSQQLNTTKEQAKEMSKLLLHETDRLLEQ
                     RITDAVKDFEGKLYGINDNAMNAVELRIKETRNTAILNLTAALIVLLAVIILAFKFTF
                     "
     gene            complement(28152..28688)
                     /locus_tag="ACFJAG_000541"
     CDS             complement(28152..28688)
                     /locus_tag="ACFJAG_000541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IncP plasmid survival protein KfrC family
                     protein"
                     /protein_id="HFC3979915.1"
                     /translation="MNEDKGLVAKAVAAETEQEELFESRQVIEETFAGVLNTYVLEKT
                     EQVERIEEKLEQLISGQMAKLQALQNARPGMLSMPSKKQTWSANIAVAQSRLNRLHDR
                     LEDVREIRDGMALGVPKIQELAARKLRMEEPDLAKKFDDVQTAVRVHNLHEKQRKEKE
                     QQKRQAGLSLSLGQKIVR"
     gene            complement(28725..>29129)
                     /locus_tag="ACFJAG_000542"
     CDS             complement(28725..>29129)
                     /locus_tag="ACFJAG_000542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KfrB domain-containing protein"
                     /protein_id="HFC3979916.1"
                     /translation="TVLLELFTSFLKIFSRMEAEKQRVLVLNKQHLFETEKDGKWITQ
                     AVKPAPANMKPGIYLLHTAKSPQDSVRYEGQIVFQNDSYVYQKTRQSIVKYPCSLFSS
                     VPSIGEVVSISVKDKAATVEKAGIGEKKTLTR"
BASE COUNT         7312 a         7530 c         6185 g         8102 t
ORIGIN      
        1 ctacgaaggt aaaatcggag cgtgggaagc agcattttat aaagctggat tatttatatt
       61 ttggtcatta tcttcaatta gtattgtaat gactggagcc caactgattt tccagagaga
      121 taatatcagc agtttttttg ctgaatttac tcgtttaatt ttattcttag gatttttcct
      181 ttggattatc acaaacggaa ttaaaattgc gacatcaatt aaagatggtt taatgaaact
      241 tgcaggacaa gctagtggaa atggtgagca gattacacct agtagtattg ttgacatagg
      301 ttttaattta tttgacaaaa ttgttgaaaa tagctcaatc tgggatccaa ttgatagtgc
      361 cactcttatt gttattggtt tagttatttt actaatctta gctgctgtcg gaattaacat
      421 gttattaatg ttaataacaa cctatattgt catctattca ggaataatta tcttgggatt
      481 cggcagtgga cgttggacat cagatatggc tgtcggatat ttaaaacaag tattaaactt
      541 atctttacaa ttagcagcta tgattctaat tattggaata ggtcaatcga ttgttcaaga
      601 cactataaac actataggaa cccctggatt tagagaacta gcagttgttc tagttcaaac
      661 agctttactt gttggtttag tcgttaaaat tcctccaatg ataggttccc tagcaggagg
      721 agcaggaagt ggaggaattg gctcctttgg tgtaggtaat gctattgctg ctgctatgtt
      781 ggcaggtgct gctgccggag caggtgcggc attaaaaagc ttagccgtag aagctggtgg
      841 tttaaagaaa gcatttgaag ctgcaaaagc aggcttggga ggttcaaatg gctcatcaga
      901 ttcaggtagt gggaagatgg atagcgcagt tgatgccgtt gcaggtgcaa atgccggaga
      961 taaatctaac caagatggaa aaccactgac tgctgagtcc agtggtaact cagaaaatgg
     1021 tagtgaagga tctactacag gaaattcggg aggtaatcca tcaggctcct ccgaagaaaa
     1081 tacaatttca tccggaagct cctcaagttc gggggaagca aattcaacaa atacatccgc
     1141 ttcatcagga gcggaaggta gtgccgaagg ggaggctact tcatcagaga catctcaatc
     1201 agcttctgat tcgccaagca ataatagcgg agaggcgact caaacggctg acaccacacc
     1261 aaaaacaact aataccggtg gaggaagtcc tcttgctact gcgatgggtg gtaataaagt
     1321 atcaaattgg caggcggcaa aaaacgttgc tgtcggcctt gttagcagca aatggaacaa
     1381 tgccgtcaat aactctgccg gtggccgcct agtcaaacac tgggaggacg aaaagaaaaa
     1441 aacagaagac cccacaaaaa atccccaaaa aaaccctgaa ggagatgaca atgcttaaaa
     1501 aaacgcttat ctgcatattg ctggtcggtt ccgtacactt tgctatggcc gaaagcctca
     1561 acgatgcgct gaaccgcagc cgttcgggaa actcgaacaa caacaggccg caggttgaag
     1621 acttgttcac cggtgatgta aagctggcct gcgaagccac gttatgcctg tccacgggca
     1681 accggccgag tgaatgccaa ccggccatcc accgttattt ctctatccgc cacaaacgga
     1741 tgggagacac aattcgcgcc cgacacaact tcctgcgttt atgcccggca tctaaagagc
     1801 aaggcatgcc cgaactggtt aatgccattg ccaacggtgc cggtcgatgt gatgcccggg
     1861 aactgaaccg tatcaaccgt tccacttata tcaagcgtgt ttgggtcgga tcaagacggc
     1921 atggagactg gcaagaggtc aaagtcccct atatccgtaa cgccaaacct tcgtactgct
     1981 ctgcctactt tgaaaacggc tggacacagc ttggcacacg ctatgtaggt gaagagaaaa
     2041 atggcgggaa atgggttgac taatggttta tgtggccgac ctgcccccat ttatgcagga
     2101 acgtgttacc tgctcgattg ctgcggctga aaaataccat ctgccgccac attacctgtt
     2161 ggccgtggcc gaacgcgaaa acggtcgtcc cggtcaacag gtacacaata ccaacggcac
     2221 ctatgatgta ggcgcgatgc agattaatac cgcctatatc cgcaccctat cccgttacgg
     2281 tgttactcag tcagccgttg cccaacccgg atgctatgcc tattacttgg ccgcatggcg
     2341 gatcaagcgg cacatcgttt atgatagaaa gggagatatt tggacaaaga tcgcaaacta
     2401 ccattcctat acgcctaaat acaacgcaat ctatcgcgca gccatcattc ggttggccga
     2461 aaaatgggaa cggtggcttg ccggtaggca agggaataac gccaagggaa atgttcccac
     2521 acaagctgtt ccagccgttc ggacaattcg gtcgcaacca ttgcccaagc aatatgtttc
     2581 cccgacgacc gtctatgttc ctagaacaat ccgtgtggta gagcgttccc cggagccaga
     2641 gccggaaacc gtccaaaact aacagtaaag accatctgaa aaagagtttc agacggtctt
     2701 ttatcagatg tgcgatggtt acgaatacaa tgcttgcgaa tggagcggtt ggcaatcttc
     2761 aaaagaaaaa gccttgttag aggctatccg cagggcggct attcagaata ccccggaata
     2821 ccggcaagcg gattgttgga tgattaactg attcccccct tgacatggat ggtaaattca
     2881 tgtttatatc aattcaatta tttaggaggt atggaaatgg cttacgcaat tgcatttgat
     2941 ttggatacga ccgttttaca agaactttac cctaataaac gtagctggca aaatgcttac
     3001 ggcgatgtaa aaaaaacctt ggtcggatta ggttttaacc atcaacaagg cagcgtatat
     3061 tttggaggct ctggggttac agccgttagc tgtgttttgg ccgcccaaaa actgagccag
     3121 acctacgcat ggtttaagcc ggccgtttcg gatattcgta tgttgcggat tgaggaaatg
     3181 aacgatttgc agcccgcttt ataaagcgat aggtatctta agaaaagggc agcgcggtat
     3241 ccccgctctg cccttttcct ttccttccgg cgttgccgga taaagtacca aactactttg
     3301 ccttgcaagc ccgtttgacc gtactttcgc taacattgaa atgtgcggcc gtccgggaaa
     3361 tactggtttg ttcagactgc cgccatcggc ggatttcttc gggatcgact ttcactttcc
     3421 gccccagttt tttcccttct tccctagcat tgcggatacc ggccatttga cgctctttga
     3481 tgtaactgcg ttccaactcc gcaaatgcgc tgacaatagc cagcatcgcc gtgcctaacg
     3541 gactggccaa atcgaagttt tcccggagcg aggttacggc cacgcccttt ttctgcaaaa
     3601 actgcaccgt ctccaaaaca tcgatggtat ttctgcccaa gcggtcaata gccactacga
     3661 ctacggtatc cccttggcgt acaaattcag ccatcttacg gaactcaggc cgattcaggg
     3721 cttttactgc acccgaagcg gcctgatctt cataccaccg ttcgatttgg tatttgtctt
     3781 ggataacctg tctttgtgcg gccacattct gctctttggt cgataccctc aaatagccga
     3841 taatcataat tcctcaaacg gattaaaaac tcttgcgccc aagtgtgaaa aatccttttc
     3901 attgcgcgtt accaccatca tatgctcctg tccaacggtc gtcttcgata agcacacggt
     3961 caaactcaat gtctgcaata tctacctctt ccggaggaac ggccaaggca tcagcgatac
     4021 tctccccctt acccaacgat tctgctccta acgaaaggtc atggggacag ccattcaaaa
     4081 acggagacaa ccgtacctta taagccggaa aatcggtaac aaactttctc agtttttcat
     4141 caaccatcct ttgaacaaat ggattgcctg tcgctgcctc gatgttgtgc aaaatgtcgg
     4201 ccaaatctcc gattatcgtc aaattatcca gcgcagccgc ataactctca ggccgatacc
     4261 cgcgccggga ataagacagt tccctgataa tcagcgaaat ttccgtgatc aaccgcattt
     4321 tttctttcat ttccgtatcc ctgcttatct gctgatggat tttttggcgg aatactccaa
     4381 agacttgaca atcaatttgc ccttattgct tccgatagaa acgttctgcc ctatctcaac
     4441 caatttggcc agtctttctt cgttatgtgt tgcattgtgc ctgacaagcc cgtttttggt
     4501 tttctgaaat accgcagcgg catccttgta aatgatttct ccggaataag tttgaccagt
     4561 ctctgctttt ttagcttgac ctagtaaata gataccggct ttcatgcctg ttacaggaat
     4621 ttgttccccc ttagaccaca actcgtttgc tgactttgtt tctagggtaa cacccttgga
     4681 gttagtaact accctttgct tggaatactc ttttttggcg aaaatacttt caagatccat
     4741 actgcccttg gcctgattga aacattcccg gctgattttc cctgaatcga aatcaccttg
     4801 gattttctca gccaacctgc ccaatatttg ttcttgcgac cccaaggaaa gcattttaat
     4861 gacatcatcg aatttatcga taaattcact gttcctgtct tggttgatgc cgactatttt
     4921 taccgcatcg ccaaacttat ccctgatttg actgagcccg ttaggaagat tagcctgaat
     4981 atcggccatg atgcctatac tagctcccct accatattcg ttaaaccgtt tgtaagtatt
     5041 gtcggaagct ctctcagccc tcatgctgac ggccacaata ataacttcga ggccacgatc
     5101 caaacattgc tcaatcttgc gaaaagcaga ctgcggccgc gcaagctgtc cttcaaaaag
     5161 cagcttggtg gtatcctgca tcatcatgtt ctttactgtc gaagtttttc ccgaacccgg
     5221 aattcccgta acgaaaataa cttctttctt ctgtggctcg tcgcgtttca gcacctcgtc
     5281 aaactgggta gaagataaaa ctgctgctga attgtggata gcattattaa ccgttgccct
     5341 gtcttctttg ttttcaaaag ctggaaacaa ctctttaaac gtatcagcac aaacatatct
     5401 accgccttct gtatctgcat gttggctata taaagacaat atctcgtctg tttgttcggt
     5461 cgcaaaacgg atggcctcat cctgaacgga agacaaatat tcgttattgc caaaatctct
     5521 caaattaata tcgctagaca gttttaccat agcggattat tgctccttat ttgccgccca
     5581 caacactctc aacttagcta gaagctccgg agatgggccg gcatacaagc gtttttccac
     5641 ttctttgcgg aaggcttcgt ctgtcatcat cctgcggttt ttttcgcaag cctcttttat
     5701 cattctgata gcattacttt cttggggctc aactttattc ataataaaat cctaatctta
     5761 attttatatt actcatcatc gcttcatcgt tttctttaat gaggcatctg ccggtttaac
     5821 ggacaattca tttccttccc gcttaataga aaccttctga ccaatttcca cctgttcgga
     5881 caaactagaa aactttcctt ccgccatacc ctgaaccgcc ttatggcgta tcagaccttg
     5941 gtcagtcttc tggaaaaccg atgcctcgtc tttatggaca atctctccgc tgtattccct
     6001 gccggattta gccggtttcg ccgtgccaag catgtgaata ccagctttca tccccttggc
     6061 ttcagccttc tcaatatcct gccatgtgtc gcctgatttg cgttgcagtg ttgccccttc
     6121 tgaattagcc accacccttt cctgacggta aatctcttcc acacgctgat aaattgcttc
     6181 actatgctgt ttgaccatgc cgagataatt aggtattgga tcgatactgc ggctttctgc
     6241 ctgaagctgt atctcgtccc atgcttttac aacctgtttc aaccgtttag gggttatttc
     6301 ctgataagcc gatagtgcat cttttgccgt ttcatactgg ttttgtcgcc gattcaaact
     6361 gtcataaagg atgtctcctg cgcggttggt aacacgaacc ctgtcaaaac ttgattcaca
     6421 ttgagacaac gtatccttga atccagccat tgcctcgtta tggtacgact cttcaacaaa
     6481 tctaggctgt gaaacacctt tggcatgttg ttcctcataa cgcttaaaaa tcccggctac
     6541 actctcttca gaagcagtgg ctaccgccag catttctacc ccgtaccctt ctgattttct
     6601 atcacggata aattggctga tacttgcagc atttctaaat gtcccctcct ccacaatatt
     6661 ccgccggttt tcttttgcac tattccgaac actaatggcc aaagcaccgg catctttctg
     6721 agtttgttca gacgaataca ccaccccctc cggcgcagga atcagtgcac gcataatatc
     6781 tgcatccaca tggatatatc cgccttcttg gcgtaactcg cttttagcta aagaagctgc
     6841 cttactctta cccgctccgg gttgtgcccc aactagaaca attttgggtt gctccacact
     6901 ttgcgttcta gataaacgtg gcttcatgaa accattcaga attcttgcct taccttcggc
     6961 acttaaaggg gtgtactcaa tcattttaca cgtccaactg tttggtcatc cggattgaaa
     7021 atacgcgcga taatatctgt gtcctccgga gagaggctgt cacgcaacat atcgatagcc
     7081 tcaagccttg ctgtacagta ttcgataaac gcttggtttg gtttatcctt tacaaactcg
     7141 gactctcttg cctgaattaa tgggcgcatc gaatctccca acaactccaa agccacttca
     7201 taattgatac caggaatagt ttcttgcatt tgcatcttgg cttcctccaa aagttatcca
     7261 caaattttgt tagtaagctg cccatatcgc cagcctgcca catataataa attgaatctt
     7321 cgtcatcaaa ccgtttttgc ctgcttttta agcaacatgg ttcaaaacct atgtttgaat
     7381 aataagccag ttcaaaataa ataacaacgt ttttgaccta tacttccaga ccttaacgaa
     7441 acatggttca taaagtacac tttttgcacc tacttatcta agttacccac ctcttaatca
     7501 agatttggcc attgcccacc atatcccata atgtgtagaa accagtagcg ttgggtggat
     7561 gacggcgttt cgggttttcc gcaggcggca gacagcctgc aatggtagtg gctaatcctg
     7621 cgcgctattg catgagacac aaacttcaag atagcgcagt aaggcttttt ctatcgtttg
     7681 tcgattaaca tctaggtgga aaagagactt atattcggat gcaatgcttt ttgccagatt
     7741 ggcaataaac atcttgtcat cttcatctat atcaacatgg ctgataaaag tcggtttggc
     7801 caaattcttg acagtgagat aggcattgaa ttctccaaca ctcatatccg aggaataata
     7861 ttgcagctct atcggtttca ttttttcttc gattttggct tcaatattct tcaccgattc
     7921 ctgccgttcc gcttctttca ggcagcctga aaaattgttt ttcagtgcca atgcgtgcag
     7981 cagagcgtac agggcatcgc taccggctgc cgacagcgga ggcacggatt cgagcagtcc
     8041 gccggagacg gtttcggctg ccgcaccgta gcggccgttc tctttcgtca ggcggataat
     8101 gatttcgtat tcttggacgg ttttcatgtt catactccca gttgtctttg ttcagtctgt
     8161 gctaacggcg tatccagccg tactccggcg gcggcatcct gcccgactct ctttcacgtt
     8221 tataattata ggataatttg tcctacttgt caaataaatt ttagccgcta aatttttact
     8281 ctcgcttatt tattcattat aataaattaa tcgttatttt gtttttgata aaaaattgga
     8341 gattccttta caaatatgct cttacgtgct attatttaag tatctattta aaaggagtta
     8401 ataaatatgc ggcaaggtat tcttaaataa actgtcaatt tgatagtggg aacaaataat
     8461 tggatgtcct tttttaggag ggcttagttt tttgtaccca gtttaagaat acctttatca
     8521 tgtgattcta aagtatccag agaatatctg tatgctttgt atacctatgg ttatgcataa
     8581 aaatcccagt gataaaagta tttatcactg ggatttttat gcccttttgg gtttttgaat
     8641 ggaggaaaat cacatgaaaa ttattaatat tggagtttta gctcatgttg atgcaggaaa
     8701 aactacctta acagaaagct tattatataa cagtggagcg attacagaat taggaagcgt
     8761 ggacaaaggt acaacgagga cggataatac gcttttagaa cgtcagagag gaattacaat
     8821 tcagacagga ataacctctt ttcagtggga aaatacgaag gtgaacatca tagacacgcc
     8881 aggacatatg gatttcttag cagaagtata tcgttcatta tcagttttag atggggcaat
     8941 tctactgatt tctgcaaaag atggcgtaca agcacaaact cgtatattat ttcatgcact
     9001 taggaaaatg gggattccca caatcttttt tatcaataag attgaccaaa atggaattga
     9061 tttatcaacg gtttatcagg atattaaaga gaaactttct gccgaaattg taatcaaaca
     9121 gaaggtagaa ctgtatccta atatgtgtgt gacgaacttt accgaatctg aacaatggga
     9181 tacggtaata gagggaaacg atgacctttt agagaaatat atgtccggta aatcattaga
     9241 agcattggaa ctcgaacaag aggaaagcat aagatttcag aattgttctc tgttccctct
     9301 ttatcatgga agtgcaaaaa gtaatatagg gattgataac cttatagaag ttattactaa
     9361 taaattttat tcatcaacac atcgaggtcc gtctgaactt tgcggaaaag ttttcaaaat
     9421 tgagtattcg gaaaaaagac agcgtcttgc atatatacgt ctttatagtg gcgtactgca
     9481 tttgcgagat tcggttagaa tatcggaaaa ggaaaaaata aaaattacag aaatgtatac
     9541 ttcaataaat ggtgaattat gtaaaattga taaggcttat tccggggaaa ttgttatttt
     9601 gcagaatgag tttttgaagt taaatagtgt tcttggagat acaaagctat tgccacagag
     9661 aaaaaagatt gaaaatccgc accctctact acaaacaact gttgaaccga gtaaacctga
     9721 acagagagaa atgttgcttg atgccctttt ggaaatctca gatagtgatc cgcttctacg
     9781 atattacgtg gattctacga cacatgaaat tatactttct ttcttaggga aagtacaaat
     9841 ggaagtgatt agtgcactgt tgcaagaaaa gtatcatgtg gagatagaac taaaagagcc
     9901 tacagtcatt tatatggaga gaccgttaaa aaatgcagaa tataccattc acatcgaagt
     9961 gccgccaaat cctttctggg cttccattgg tttatctgta tcaccgcttc cgttgggaag
    10021 tggaatgcag tatgagagct cggtttctct tggatactta aatcaatcat ttcaaaatgc
    10081 agttatggaa gggatacgct atggttgcga acaaggatta tatggttgga atgtgacgga
    10141 ctgtaaaatc tgttttaagt atggcttata ctatagccct gttagtaccc cagcagattt
    10201 tcggatgctt gctcctattg tattggaaca agtcttaaaa aaagctggaa cagaattgtt
    10261 agagccatat cttagtttta aaatttatgc gccacaggaa tatctttcac gagcatacac
    10321 cgatgctcct aaatattgtg cgaacatcgt agacactcaa ttgaaaaata atgaggtcat
    10381 tcttagtgga gaaatccctg ctcggtgtat tcaagaatat cgtagtgatt taactttctt
    10441 tacaaatgga cgtagtgttt gtttaacaga gttaaaaggg taccatgtta ctaccggtga
    10501 acctgtttgc cagccccgtc gtccaaatag tcggatagat aaagtacgat atatgttcaa
    10561 taaaataact tagtgtattt tatgttgtta tataaatatg gtttcttgtt aaataagatg
    10621 aaatattttt taataaagat ttgaattaaa gtgtaaagga ggagatagtt attataaact
    10681 acaagtggat attgtgtcct gtatgtggaa ataaaacacg attaaagata agggaagata
    10741 ctgaattaaa aaaattcccc ctctattgtc cgaaatgcag acaagaaaat ttaattgaaa
    10801 taaagcagtt caaagtaact gtgattacag agccagacgc aaagacgcag agccgataaa
    10861 atgagattaa tacaatctca ttttatcggc tctttccgtt atgtatggat tcttttaatt
    10921 agtcttcgat gtttcttgct tcgttgatac cgctggctaa agattccatt aaggatagtt
    10981 ctttgtctgt aaagctatcc atgtatttct ctatctgtaa tcgtcgggtg ctttttacca
    11041 agttattagc aggtaagaaa aattcatcaa cggaaacatg aagtaacgat acaaggtcat
    11101 aaagaacttg tatgctgggg tgttgccctt tattttcaat attagttaag taccgtgggt
    11161 caatttcaat caatgctccc acttgttcac gagttaaacc tcgtttcaat cgagcttctt
    11221 taatggctaa accaaaggct ctaaaatcat atttatcttc ttttttacgc atagtagacc
    11281 acctctatac attttattgt tcctactgaa ttaaaaacag gtatagaaaa acgtgttata
    11341 tggtttatag gtttatattt aataaaaagc actactaaac gccaataaaa aaaaccgtta
    11401 tatggtagtg ctatttacgc tgttaaaata ttgtatatta cttccaaatg gcggtttgtt
    11461 ggaggtcaac gtcgccatga agtacatcat atacaataaa tttccttaca ttgggttatc
    11521 aaaaaaatta actgtgagta attggagaca ccatgccaca tgagcaaatg attgatgctt
    11581 tttcagcagt cattcaaaac tccttaagcc tatatgaaga gcaaactccg atatactact
    11641 acctgactat ctgcggttct tgggttctga ctgcactcgg catcctctcc ttggtgtccg
    11701 tattctttac catcaagcag aaaaaaccat accgttttat cgtcccgatt ctgtttttat
    11761 ggctgggata tgaaagcatc cacatgccgc gcccgaatct tgctgtattc tacggataca
    11821 acttggcgca gctttcctat ccggcaaacg aaaatcccaa ttcgttccta catctcacag
    11881 acggctcaaa tccgatttgc tgcttcatag gcgaagacga gtatttgcaa gccaaacggt
    11941 taggtttcaa agagtatgcc gatgcaaaag caaaggcttt ggttgatttg attgaaatgg
    12001 agaaaaaatc caaacaatct gattgaattt aaaattcaat cataacgcgg tagggggctg
    12061 gtcaagcgaa ggttcaggct ctgactgaaa tttcgcttgg acagggggtg tggggcggag
    12121 cgcagcgaag ggctaccgcg tggcggccga agccgcccga caaactccag tttgtcgcta
    12181 ttccgttttc agtgcgtaaa tacctttccc cactctcaga aaaaagcgtt cgtcctgtaa
    12241 cacctgccta actttggcct gccagttcct gttttctgcc cgcgcggcgg catacggttc
    12301 catttcgcca taaatctcca tcaagcccat atccctcccg tctgccgcct gcaatacccg
    12361 tcttacggcg gctttccatg taacggctgt taccgcctca accctattca tcgctttggc
    12421 taaaaagtac aaggccgtct gaatctcttt tttaaagacc agcagttttt catgggcaat
    12481 tcgtaccagc tttccgccat attggcggct gtcgctgacg cagttgtgct ggattttgat
    12541 aatctcatcc accagccgcc ccgccgccat ccgttcaacc atgctgctca aattgtagta
    12601 acggccgtcc ttcctcatgt tgcccattag aatcccataa tgcccgccct gctcggtcgc
    12661 atcatggatg ttcatcatgg ccagcaacat agcctcctga aactgttcca agtccatttg
    12721 gctcaaatcc cacggattgg ctgcatcacc ccattgattg ccactgtatc gaatcatgtt
    12781 ccaataaggc ggatgccacc aaatcaaatt ggcctgttct cctaaaaatg ccgcaaaatc
    12841 ctgagtcagc aggttatatc cctgatgcaa atccgttcct ttaaaacgaa tgcccatttc
    12901 ttccgcaaca tccgaactgg taccgctgcc gatgctcggg tcggcaaaca gtccttccgg
    12961 agcaagatag ctttccacaa agtcgcggat gatatgcccc gtacaatttc cgcgataacc
    13021 gcttttaccg taatttccgc gctgcggata agaacaaaca gaatgcgtaa acatggttca
    13081 ttcctccttt aaatcgtctt cgttttcgcg ataatggcaa cctaatactg catccaagtc
    13141 ccgcatggtt tccaccagct cgtcattgac ataaaagtgt gtatccagcg cattgattaa
    13201 aaaacccgtc cgcaagaacg gccaccggtt gcggatggta tcctgcaaac gctccagcaa
    13261 atgatgctgc cgaaggtttc caaaatgcgg aacggtttca tatgtccgtg ccgtttccca
    13321 aatgtcctgc tcgaagttga taaacgagtc gccgccgagt tggcgcaaca gattcatcca
    13381 accatcgaaa ctgtcggaca catcatccca ataaagcata atttcctcct tatcactcaa
    13441 tccctgcatc ggccaaaatc aaagctaaga tgccgctgcg ccgtgctttg gcagttttca
    13501 gtttcagaca ctgcaaatca tcgcaaacaa tttgataccc gcgcgtctcc agttcggccg
    13561 cttctgacac ttgcaggctg taatactgcc cgccatcgaa agtgtatcga caaagcagtg
    13621 taggggcgtt tcgtccgttc cacatgacgt taatcggact gaatcccatc aactccccat
    13681 tgctccaaat attctgctcg acaaatacat tcggatgcct agttaatctg ttggtatagc
    13741 tcgccatctc tgtctcccgt actttccttg gtgttaaacg gtttttgaac tgaaccagca
    13801 ccggcgtttc cgccccgctg tgatgacgtt aaaagacaaa ctgctttgag atacaaggct
    13861 gccgcaggca ccgcaggctc ggccttgtat ctcaaagcag tttgtcttag gcatcacgca
    13921 acagcggggc gggaatgccg gctgcgtcga atggccaaaa gccgtttaac accaaggaaa
    13981 accatctgcc ggccgcagcc ggctcattgc ccctcacggg gaaggggtgg ggttcggaga
    14041 ggcggtgccg cagcacggcc gacacttaaa ccaagagcgg tttgatgcct tagcatgaaa
    14101 ccgctctttc cattcaatcc tgctgactct tgattagcct gaaactccca gcaccttcaa
    14161 gataaccgtt tatagtcttg cgaatggtaa catattccgt ccccatcatt ccggatccgc
    14221 ccttagtcca aacaaacggc tccttcggca agaaaggaat atattcctcc tcttgagtct
    14281 cccccatgcc aagactaatc tcgggctgat tcccatccgt ctcataatac agcttttcgt
    14341 cccctttgaa aaaatcggcg acgaccgctt ccgcctcttc aagagattgg ctgataaata
    14401 aagccgaact accatagccg atctcacctg tctctacaag gtagaaagtt cgattttcag
    14461 cggacagact cattttctcc actcccgata aacgcctatg tcgttatgga taaaggttga
    14521 atagataccg atcccaccta ccctgaacct tcttgccaaa gcggcaagct cggaaaggga
    14581 cgctctttcg atatgaaagt cccccgcatt gccggacaaa tgctgggagt ttttggccgc
    14641 cccctctaac gagtcgttat gtcggcgcgt gcggaatccg ctatgcaaaa ccaactccgg
    14701 attcggcctg cccaaatcac gcaaatactg ctgctgggca aacagcagat tgatcaaatt
    14761 gatgttgatg gcgtgcatct gatggttgtc caccacatcc cgcatcatcc aacacagagc
    14821 cttatagccc tcttggatat actggccgtc ggcaaagaat ttgatgtttt tccgttcccg
    14881 ggaagcaggc cggtaaatgg acaatacccg gcttcgtttc caaaaccggc tatcatccgc
    14941 caaaacgatt tccggcaaca gtaaaaggcc gcctgatgaa gcaagcgcgg ccgctttggc
    15001 cgacagcttt aaaaaatccc gacgattcaa cgctccctcc ctttcacgtt accgctgacc
    15061 ataaaagcat accggccgta ttcgttacct ccctcattcg ccgtttcccc ggccgaaagg
    15121 gattttaaaa cctgctctaa tcccatctct accgcaggta aaaaatcgtc atcggccgcc
    15181 gtaatggtaa tactgagtgt cttcgtcccg gcatgcgtac ctgcccggcg atccagtccg
    15241 tactgcttct gaaatgcttt gacggcggct tgctcggact gattccgttc ggccgacatc
    15301 cccgttttct cctcctcgtg ccgcagcaac atttctaaat aatcgtcaaa cgccaagggc
    15361 tggttctggc tggttttccg gtaatcgacg gcgatatttt gcagcgtctg cctcagacgg
    15421 ccgtcaaagg ccatgccgaa aacccgccag aaccatcctt ccctggcctg tttgtgataa
    15481 gtcagaaaaa aagccactct gtatagtttg tccttatcca taacaccccc tatcggctgc
    15541 cgcgcgatgc ggttttccgg gttgttgccc gctgctgctg cttggtctgt tcgacaggcc
    15601 gatcctgaga cgcttcttcc tgcaaaccgc gtgttttcag agtttgcaat tcgtttgccg
    15661 gtcgggcatg tatcgcctcg ttgatttgct tggccaaacc ttcacggccg aacttggatt
    15721 tctgagccaa atcgttgaaa tcggtaaatg ccttatgctc cgacgactgc tctcccggtg
    15781 caaacactgg aaacactgca cggcagttaa ggatttttgc cgcctccaac gctttttctt
    15841 tgccgggatt gttgccctgc ttagcttcga cagccaaatc atcgtctcca gcgaccaaaa
    15901 actgagcctg agggtatttc gcagacaaga ctttggccac caaaggcagg ttgccggaat
    15961 tgaaggcggc cacgctggcc actgtgttgt cggttgcctc cttaatcgaa gcggccgtgg
    16021 catagccttc cgataaaata atggttttgg ccttagacag atcctgctgg ccgacaacat
    16081 gcatacagcc ctcctgctcg ctgtccttgg caaatctttt agtgccgtct gcctgaatgt
    16141 attgcatgga gcgtaactct ccggctgcgt tgtacacagg aatgaacgtt ttctgcccct
    16201 cacggtcagt aaagataccc ggttgcggct taataccctt ggcattcaga taaggtgtgc
    16261 ctgtttgaac gggcaggtag ctttccatgt agtatttgat acggccgaca gcagcctcct
    16321 gagcctgttt tttctgctcg ctccgcattt gcagtttctg cgcggcctcg gcggccagct
    16381 tggctttttc ctccggagac aggctgtatc ccttcgcctt ccacttaact tccgctcccg
    16441 tccggttgtt tttgatgtag cctgccgggt ggccgtccaa atgaccaaca taaaagccgc
    16501 tgcgctcgcc ttttttgtcg ccgacggttt cgattcggtg tttttgtccg tccataaacg
    16561 gatgcccatt agccaccaca caccccattt cgcgcaactt gtcggcaaac tcttccaccg
    16621 gcgacatcgc gggcatgctt tgagtctgtt gcttttccgg caaccatttt gacgcggccg
    16681 gtaaattggc gttactgctt tccataaacc aagatttgtt ggctttgtcc catttggcac
    16741 caagggcttt agcctcttct ttttcttcat acggaacggc aagataaaca cgggatgcgt
    16801 tttcttctgc cggtgcttct tctgttttgg cagcctgata ctcttgctgt atggctgcga
    16861 cctgacgctc aactgcttct tcctgaggag tatcgtccgg cacggcctct tctgccaacg
    16921 cttcctgctt cggctgcatc caccgtgcaa acagtgcggt attcacgcct tcgggaatat
    16981 accaagactt ctgatcctta tcccatttcg cgcccaatgc tcgcgcttcg tttttttcac
    17041 gaaacggcac atcaattagt gttttcgcta tggccggagt attgtccgtt accgtttttg
    17101 cttggttggt ggcactgtcc agccattttc tgaaaggctc ctgattgacc ccgggaggga
    17161 tgtaccacga tttctgatcc ttatcccatt tcgcacccag catttttgcc tgttccctgt
    17221 cggcataagg aatttgaacg taaacgcgct catcggaaac cacgcggacg ctttccttgt
    17281 cctgctccgg cagaaactgg cggatctgtt cttcaaccgt acgataagag gactgctcga
    17341 tggcttcgtc caaagcctct ttggccgcat tcagattttc cataaatgac tctccattct
    17401 ccggtttttg atgccgctgc caaaaagcgt tctgaaacgt ggcatcatcc atctccgaaa
    17461 taaccagact gaaacgcttc aagccctcgt gcattttctc ttcagccatg aagttgatga
    17521 tcgccgccac atcattttta tcaaccgcat tgataaggtt cttttcttcc gccaagctgg
    17581 cttcatcaat attctgtcta tcagaaatac tcactgccgc ctcgttctgc tgttcgattt
    17641 cccgcacctg atcaaaggcc atgacatagc cttggatttt ttcggcgtca gaagccgcac
    17701 gcatgatttc catcggatcg tcctgcaata ccataatcca gcttgctaca taactggcat
    17761 gttgcccggg attgaatgaa acgcccaatt cctgactcag catcaatgaa gcgatttcgg
    17821 cacgcaattc ctcccgtgcg taaccctcgc tgccgaacgg gtgggaaagg tcgcggttca
    17881 aacggtcagc atgccccgtc caatgcccca attcatgcag ggctgtttca taatacgctc
    17941 ccggactttc aaactgctcg cgcagcggca gggtaatact gtccctgctc ggagagtaaa
    18001 acgccctgtc gccgtgccgg tggtcgatga ccgcaccaga atttttcaga atgttttctg
    18061 cccgctcatc cggattccaa cttagcggcc gcagcttcaa cggcggcaag ccgtctatct
    18121 gttcgccgtt aaataccacc gcatgaaaga cctttggacg ctccaaacga accgtttcct
    18181 tctccggttt gccgtcctgg ccgataattt cctgaccctt ttcatcggtt ttgggaactt
    18241 cctcggtgaa ctgccaatat tcgacaacag tacccttctc tccacggcgc acctgcgccc
    18301 cgatggatga tgcctgttta taggttatcc agcgcggatc ctttctgcct tgtgcctgca
    18361 accacagatt gttaatgccg cgataacggc ggccggtaat ggcattgtgc ggcataaaat
    18421 ccggcaaccc gccgccgtcc caaggtttct gccacggcgc ggttccctgc cgcaactgtt
    18481 cgatcagttt ttccgccacc tgttcgtaaa acggtttttt attctgcatc cctacgctcc
    18541 ttccgccact tcgcgggaaa ggtctgccac ggaatcccgc gcggtttccg catccattgc
    18601 ggtctcctca aacgccccca aggcttctgc ctctgccgga tcaaaatcca cttccattcc
    18661 cgggttattc aaatccgcca ctttttctgc gatcacttcg atgtcgatac tcatacctta
    18721 tcctttcgta tgtttggaat agtccggctt accgccagca tcggggtaat actgcttgca
    18781 ctcggggtaa ttgctgcatc cccaaaaatg cgttcctttc tgttttcccg gccgtctgac
    18841 caagggatgg gtgcaggcca tgcacttgaa ttttgacgac ggctcggctt ttttcggtgc
    18901 cagtaccggc cgaccggcct tgtcggaaaa agaaaccttg catccgtcct tatagccggt
    18961 acagccccaa aaaaatcctt tcgatccgcg catccgcctt aaaggtttgc cacattcggg
    19021 acacgggtac ttcttgacat tgagactgat gccttcccgc cctacccgct ccacctcgcc
    19081 ggatatgtac tccatcagac tgttcacaaa acgttgcgcg tccaaaccgc cttggacaat
    19141 atgctgttgc tgctcatgcc ataaggctgt catatcgggg aacttcgcct gatcgggcag
    19201 cgcgtcataa agctgttggc cgatttcgga actgacaatg tttttgcctt tttccagcag
    19261 aaaacccttg tccagcagat tacgcagaat ttcgtcccga gtggccgggg tgccgattcc
    19321 gccgtgctct ccttccttac ccttgtcttt ctcaatcagc agttcgcgca atttcggatt
    19381 ctgcacatac ttggctaccc gtgttaaatc gttcaacagc gtatccatcg tgtataacgg
    19441 gcgcggtttg gtttcaaact gcgtctcttc tgctgtcaaa caccggccgc tgtttcccgg
    19501 tttgagcatc tgcaaatcaa cactcaaatc ctcgggatct gtcgcggttt ccgcattgcc
    19561 ctgatcgttc ttgtatagag ccatccaacc gggctttacg gttacgttgc tgcggcagac
    19621 aaatttttta ccggcaattt ctgcttcaat gtcggtttgg ttatattcgt gatccggcca
    19681 aaactgggcg atataggcgc gggcaatcag cagatagacc cgtttttcgt cttcggtcag
    19741 gtcgtccata ttggccgttt tgacggtagg aataatggca tggtgcgccg aaactttatc
    19801 cgggttgaac gccctgcttt tgattttcgt gtcggccgat gcaatggcat ttttaaagac
    19861 tgatgcggtt tttccgacag catccagcac gtctgccgca tcatcgaaat gctcgtcatt
    19921 gagatactgg cagtcgctgc ggtggtaggt aatcaaacgg tgtttgtctt tcaatgactg
    19981 tccgatgtct tttacctgat cgggtttcaa accgaatttg cgcgaacaat ccgcctgtag
    20041 tttgagcaga ttgtatggca gcggcggact ttgccgcttg gcagaagttt tagccgctaa
    20101 aatttttacc ggctgaccac tggctgcttc ggctatctgc cgtgcaaaca gcggatcgga
    20161 caaacgtccc ttatcgtcta tcggatcttg atccttgttt ggaacgtaac gggcagtaaa
    20221 ccggacacca tccacatcca aatcggcata cacatggtaa taatgggttt tgacatggga
    20281 ctggttttcc cgatcgcgcc gcaccactaa acccaaaatc ggagtctgta ccctgccgac
    20341 ggacaacact ccttgataac cctgttccgc agccttcagc gtataggctc gggtcatgtt
    20401 gtatccgtat aactggtctg ccaccgatcg cgcttccgcc gattgggaca atcccctgaa
    20461 tttggcgttg tcttctattg ccgataacgc tctctttaca gatcgctcgt tattgtcgtt
    20521 aatcagtacc cgtttgaccg gtttggcaca attcaaaaac tccaacagtt cgtcaaccaa
    20581 caactgtcct tcgtcatcgg gatctccggc gtgaacaatc tcggtacatt ccgccagcaa
    20641 atcacgaata accccgatct gttctttttt gtcggacaag ggttttttac gccaagggat
    20701 atgcgcgatc ggtaaatcct caaacttcca gttaccgtat ttgctgtcgt aatcttccgg
    20761 atcgcacaaa gcaagcatat ggccgtaaca ccaagtgatg ttgtctccgt tactgcaacg
    20821 gaaatacccg ttgcgcctct cgataccaac tcccaaagcg gcggcaatgg ctctggccac
    20881 ttcgggtttt tctgcaatat aaagtcggga catacctact cctctatcca tatcggtttt
    20941 acgacatcac ggatatgctc tctccggact atgccgtaat aacgcgcgtc aaacgaattg
    21001 gccaccgcat taccaatcaa aatgtactca tcgtctttca gacggccttc cccttcaaat
    21061 accggtaagg gctgccctag cccgtcttgc cataaaggcc gggtgccgcc aagcagccgt
    21121 ccgttaatca acaacccttc atcggtaaaa cggtaattgt cgccgggaat accggcaaca
    21181 aacttcatca acccggaata attttccgga caaaaacccg ctctgatata ccccctcctt
    21241 cttgccattc ggaaaacttc ggtatcggga gggcaaaatg taatgtagct tccgcgccgt
    21301 accgcttcgc cggatatgcg gtaaacccct ttggccacac tgcgggtatc gttgatacgg
    21361 aaaccggctg catataacag cccgtagcct gttaccagca atgcggcggt cagacacatg
    21421 gcaagcatgg cacggtcaaa cagccttctc atagagtgtc aaacgcgctg ggcgtattgg
    21481 cagtcttttt ctgagtccgg tcggtatggc gcggaggcgg gactttggag cgcgcctcaa
    21541 ataccggatc tttgaaatac agggtctgcc gcccgtaaat cgccggatac ccggcaacat
    21601 aaatgaccat atcgcctgcc tgagtgatca aaccccttgc gtccttgacc ggcccgggca
    21661 tacgcataca ttcgtcggct gtcagcaacg gccgctggac ttcctgcgta gtccgggaaa
    21721 cctgccccaa catcgcactt acccgtttgc cgctggttgt gatctgctct ttgacaaccg
    21781 ttgtgatgcc ggtcagcttg gacaggtgtt ccgccgtctc gatccggtta ggcggataag
    21841 cgttctgcac atggcagctg gacgtaatgg tttcatccgg gccatacccc gtttcccggc
    21901 ttttcagttg gttcaagtct tggcagatca aataacattt gatgccgtaa ccggcgataa
    21961 acgccaagga ttcctgcatg atttccaact tgcccaaact cgggaactcg tccagcatgg
    22021 ccagcatctt gtgtttgtag tggactttcg gcctcccgtt ttcaaaatcc atcttgtcgg
    22081 ccgacagacg gataatcata ttgatcagaa tccgaaccaa aggccgcaac cgcgccttat
    22141 cgttgggctg ggtaatgatg tacagactga ccggatcttc gtcgttcatc agatccttga
    22201 ttttgaaatc ggaacgactg acattggcgg cgaccacatt gtcgcggtac aaagcgagga
    22261 aagatttggc tgtggaaaga accgatccgg cctcctcttc cggtctgtcc agcatatcct
    22321 gtccggcaga agaaatgacc ggcagaggac ggccgtctgc atggggatac gtcgccattt
    22381 ccacccataa atcgcctacc ggtttctccg gatcagacag catgcggtca acgcttggta
    22441 aggtggcaac cccgccatca tccctagctt tgtaaagcgc atgcagaatg acgccggtca
    22501 gcaaagcgaa agctgttttg tcccagtggc tgttcagccc cttgccgtcc ggatcgacaa
    22561 tcattgtggc cagattctga acatcgccta tctcatactc cgtccccacc ctgatctcat
    22621 ccaaaggatt ccatgccgcg ctgccttgcg cggaagccgg ttcaaagcgg attaccttgt
    22681 tgtgcgcgta tttcttccgc cacccggccg tcaatgccca taattcgccc ttcaaatcgg
    22741 taatgaacgt actgtacggc catgacagca aagtcggcaa taccaaaccc aaacccttac
    22801 cggatcgggt tggggcataa gtcaggacat gctccggccc ggaatggcgc agataatgca
    22861 gggtaccctt tttatcgacc cagccaccga catatacacc gtcgctgtcc tctccttttt
    22921 tggccagcag accggccgcc tcgatgtctt tcctgtccgc ccaacgcgcc gacccgtgca
    22981 gagactcatg cgccttattg gtattcttcc gcacaatatt ccataccaac agccctatca
    23041 tgccgacggc taccaccatc aacatgatgc tgaatgccgt cataaactgc tgctcgtacc
    23101 gtccgtgcca tttaccgtac caaatcagaa tgctccacgg catatagaac ttgccgatgc
    23161 cgtatcccaa ctgggaatgg tattggaact gatgggcaaa atattgtgtg gctgccccca
    23221 taccagccaa cagcaccaat accagacaaa taaagtttac caaacggccg cttcctgtcg
    23281 cttgggcttg gttctgatgg ccgaccgcat tgttgcgttt gttcttgctg cgaaacatgt
    23341 ttatcctttg aaatttaacg atgccttccc ttaacaggtc tgatctgccc cgtcggagta
    23401 actttcactt cactgcccag tttcacgctc gaaaggcgtc tggacacata gggtgtaacg
    23461 gacatgacca gtatttcctc gacctctttc ggctggaata aagccagtgc ctgcccgtct
    23521 atgttgcgga tgcccctgaa caacatcaca ccggaatcac ttggattata cttcctatga
    23581 ttcaatatat cgaatttttt gtcaattttc tcctgccgct cggcaatata tttgtcgata
    23641 ggtgccaatg aaggagtaag tctctcgttt tcttgtgcag gctcaggatt tttcggaatc
    23701 tctactaccg cagcggatga aattttgatt tcagccaacc cttccatccc ccgcaaactg
    23761 ccccgcctga atcccggcgg tttttttccc ggtttggcaa ccaaaccgac aactgcctgc
    23821 atctgcctga tctcagctac tcctcctgtc cgatgtattg tccgtcgcac agcctgatag
    23881 tttgcggatc cttgctgctc caagtgacta gaaacatcac gcggcaatag cacttgagtt
    23941 cgtccttgga tgcgaaccag actgcgttcg ggcattcctc gcagactgtc gcttcctgcg
    24001 gaagcagact gccctcttcc tgctccaatg cctccagagt cggagagctt cgggattggg
    24061 tatcctgata tgcctgcatg gaagcctcga tttcggcttg cgtcataccc atgccatcga
    24121 tagcgtctag gctttcctcc tgcatatccc gcgcctcctc gttgctgccc tgcccgccca
    24181 tctgcgcggc cagttccatc agcttgtctg tatcgatcgg tacgttccct gacatattcg
    24241 tattccttca catactgttg ataaagatgg ttcagacggc cgtctgtaaa cgacacatcc
    24301 aaaccctttg cggcggcaat tctggccacc ttatcctgaa aatgccgcgt tccgccgata
    24361 gtcaggactt ttccgtatcg ccctattgcg atttccaacg cccttgatac cgccttatcg
    24421 tcaggaatcg cggccagttt gagcacactg cccgtatcac ggatggtcat gccgtcctcg
    24481 gcataaataa ccgtcccctt tttcgttacc gtatcaacct tgatcccggc aaatccgcca
    24541 ctttctttgc cgacaaagcg gttgcccttg taacctgcat ccttccccct ccttctcaac
    24601 gcatctaacg cccggacatc gccttcggca gcacggtgtt tcagccaatc tgcccaagca
    24661 aaacccttgt tctgctcaaa aaaaaccgca cgtcggcggg cataatcggt tcttaccgat
    24721 ctgatttcat ccttcatttg cctaaacagc atccgataca gaatgcgcct tgcaatacca
    24781 ctgctgctat gcctaatcag gctgcggcga aaagcgtatt tttctttgat gcggccgatc
    24841 tccatatccc ggttttgtgc caaatgcagg aaaaaatcct gccgcctgct tttctgaagc
    24901 tctttttcct ccttgtattg ccggaacaga tcgtccacgt tggctttgct caacggtttc
    24961 tcacggtacg ttttggatgg tttcgccttt actcctgttt tctgatcaaa tgcaccaagc
    25021 cttttttcca acgccgactt ggaaaactcc ctatctaccg aacttgcctt gacatgatgc
    25081 tcgccgtcgc tgataacaaa accgttaccc ctcagcttga tttccaatcc gtgatcactc
    25141 agtacatggt acagttgctc ccatgtctta gcctctttaa tctgctcacc gcactctctc
    25201 ctgatccatc ctatcaggct ctcgataccc gccacttcct ccatatcgat ttttttattg
    25261 ccgcgcccgc cacgctgcac cctctgcaaa ccgtactctt cttcaaactt cctgcactcc
    25321 cgccctaaaa ttttgaagtc gttatacggc tcgtggatgg tctttttttc tgggtgcact
    25381 ttgttaatcg ctacatgaaa atgcagattg tcggtatctc tgtgaacaac agagatccgc
    25441 tgatgttcgg cataccccaa agcctcaatc atgctctgct caatacggct caactgttcg
    25501 tccgtcaaaa attccccgcc cgcaagggat accatcagat gataggtttt atccgccgca
    25561 ctgcgcttat tctgatcctg aactgccaaa gtctcctgaa ccgcccacct caaatccgat
    25621 gattcatagt tatgaatctc cacctttccc actcggtttg cgacaccttg agaaccggcc
    25681 agataggtaa ctaagccttc aaaactgctc aggttggctt tacgcatcgg aatttttttt
    25741 gcaatcatgt tcagcctatt tttttagccg ctaaaattct gcggctccgc acaatctcca
    25801 acatactttc ctgcatttct ccaatttgct ccaacactcc gaagatcgcc ttagccaact
    25861 gatcgtgatc gaacatcatc agccgctcgt cgttggccaa ccacatcttg atcaagccgc
    25921 ccaatcggcc ttggtcggca ttgattttgg ccaaggcttt aaccgcttca ccgtcataaa
    25981 cggatgcagg cttgtatccc aagccaagta atttcaaata agccgattgg ctcaatccga
    26041 cagatttagc caaactctct atggttttcc attcttcttc cgaaacgtaa acgctgatgt
    26101 attttggccg ttttcgtgcg cctgccattc ttagagtcct taatttgtgc cgcaaggcac
    26161 acaacagcca acggtagttg gccagcctcg cagagcaaga taatccgttg agcctaccgg
    26221 cgaataagga ttgtgatgta catgtacatc acatatcttg ccccaattct ggggttcaat
    26281 acgccaagga ttatacgcca aataattcaa tatatcgaac atattttgat gacaaaccgc
    26341 ctaaaaatgc tttatcacaa acaaaaaatg atttactata tcgaattatt gtttttaaaa
    26401 cgattttgct tggcagtttt ggcaaggctt tgtcaaaaaa ttggcaaagc cctatcgaaa
    26461 tgatccaaat gggaaaaata gaaaaactgg ttttggccga acttgccgcc atgcagaaaa
    26521 aaggctcctc agccggaaac aaggcaaggt tcttggccat gcaggaagac attaagatac
    26581 tgctggtgga caggaatatc cccgttatca gtgtttggcg gattttgtcg gaaaaaaaat
    26641 atgtcccata ttcctatgag acatttaacc gctactgcaa gatgtatatc ttcaaatccg
    26701 acactacggc cgctgaccaa acagacaccg cccagtccac acaggaaaaa cctgattcca
    26761 tccgcacgga caaagaaccg ccgtctcccg cctccgaacc cattatcgcg ggaggcaaca
    26821 ccaaaagctc ttcaggcttt actttcaaca acaacccaga cggaaaggac ttattttaaa
    26881 tggccattat ccatatcagc ctccaagcaa aagggggcgt cggtaaaagt ttcttggctt
    26941 tgatgctgtc tatgttttac cgccatatcg aaagaccggt aaaaattttc gataccgatc
    27001 cggccaacgc aaccctgttc ggttttcccg cactggaggc ggaaaaattc gagatcatga
    27061 aaaaggatga tattgacaaa cggttgtttg accggctttt ctcacaaatc ctgtctgcaa
    27121 ccgatgatgt catcatcgat gttggcgcca atgcgtttat tccgctttgt tcgtatatca
    27181 tttccaacaa tctgattacc atgctgacgc aggaaggcca tcaggtcata atccacactt
    27241 ccattgtcgg cggccagaac ctgaagcata cggtcaacgg atttgatgcc ctatgctcgc
    27301 aatttccgga atcaaccggt ttcgtcattt ggctcaatcc gttttggggg gaaattgagt
    27361 ttgaaggtaa gtcgtttgag aaattgaaag tctatgagaa acacaaatcc cggatacgtt
    27421 ccatcattaa gattccggaa tgggacgctt ctctgcacgg ccgcgacctt gccgccatgc
    27481 tggaaaagca aaaaacattc gacgaagcct tagcgtccga agatttcagc atctttgaac
    27541 gccaacgttt gaacattatc aaaaacgaaa tgttccaaac gatagaaacc gcccaaatcg
    27601 tctgagtaca tcatggatga aaaagtaaaa gccatattag ccaccattgt tgaaaaaaac
    27661 ggcatcgcct tatctcccaa agacccgata atggttgtat tcactgcctt agaatatatg
    27721 ctctccgaac agcacgcaga gcaaaaggct ctaaccgtct tattcaaagc gcaggtagaa
    27781 gaggccacgg gaaactggat acagtccgtt caccaacaga ctgaggaact tgtcagccag
    27841 caactcaata cgaccaaaga acaggcaaag gaaatgtcca aattactgct tcatgagaca
    27901 gacaggctgc ttgagcagag aattactgat gccgtaaaag actttgaagg aaagctatac
    27961 ggcatcaacg acaacgccat gaatgcagta gaattgagaa taaaggaaac tcggaacacg
    28021 gcaattctca atctgacggc cgccctgatt gtcttgttag cagtcattat cttggcgttc
    28081 aaatttacct tctgacaaaa aacccggcaa tgccgggttt tttgtctcca ttctttacgc
    28141 caagagaaaa atcagcgtac tattttttga cctagggaca ggcttaatcc agcttgccgt
    28201 ttctgttgtt ctttttcttt gcgctgtttt tcatgcagat tgtgaaccct gacagccgtt
    28261 tgaacatcat caaatttttt tgccagatcc ggttcctcca tccttaactt cctagcagcc
    28321 aactcctgta ttttcggaac acccagagcc atcccgtcgc gaatctcgcg aacatcttcc
    28381 aacctgtcat gcagacggtt cagccttgat tgtgccactg caatgtttgc actccacgtc
    28441 tgttttttgg acggcatgct caacattccc ggccgggcgt tttgcaatgc ctgcaacttg
    28501 gccatttgcc cggaaatcaa ttgctccaat ttttcttcta tgcgctcaac ctgttctgtc
    28561 ttttccaaga cataagtatt taacacaccg gcgaaagttt cctcaataac ctgcctgctt
    28621 tcaaacaact cttcttgttc ggtttcagcc gcaacagctt tagctacaag ccctttatct
    28681 tcattcatgg tgttatccta aaattttagc ggctaaaatt tcatttagcg cgttaaagtt
    28741 tttttctctc cgatacccgc cttttctact gttgccgctt tgtccttgac actgattgag
    28801 accacttctc cgatcgacgg aacggaagaa aatagagaac acgggtattt gactatagac
    28861 tgtcgtgttt tctgataaac atagctgtca ttttgaaaaa cgatttgccc ttcgtacctg
    28921 acagaatcct gaggagattt ggccgtatgc agcaaataaa ttcccggctt catattggca
    28981 ggagcaggct taaccgcctg cgtaatccat ttgccgtctt tttctgtctc gaacaaatgc
    29041 tgtttgttca ataccagcac tctttgtttt tctgcttcca ttctgctaaa aattttcaaa
    29101 aaagatgtga ataattctaa cagaacagt
//
LOCUS       DAXFZM010000014        27956 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.014, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000014 DAXFZM010000000
VERSION     DAXFZM010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 27956)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27956)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27956
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.014"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            58..981
                     /locus_tag="ACFJAG_000543"
     CDS             58..981
                     /locus_tag="ACFJAG_000543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HFC3979917.1"
                     /translation="MKKRNNPLPLLNGVKPSYLVLPHEKQFYGLPLLHFLCIRFPFVG
                     ADDWRRRLNSGFVVGSDGAALDEHSLFEPGKTMFYYRETSSEDEPRIPFEEKILHIDE
                     HLIVVDKPHFLPVIPGGRFLRETLLTRLRLHPELQHLNVEDITPIHRLDKDTAGVMLL
                     SHNPATRGAYQTMFQNKTVWKTYEALAPTRTDLPYPLDVVSRLARGEKFFTTQEAEGE
                     PNAHTTVELIENRGEFSLYRLTPHTGKKHQLRVHMMGLGMPLLNDAFYPVPSEAGSED
                     YRKPLKLLAKKIAFADPLSGRERVFCSGFCL"
     gene            complement(1060..1701)
                     /locus_tag="ACFJAG_000544"
     CDS             complement(1060..1701)
                     /locus_tag="ACFJAG_000544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HFC3979918.1"
                     /translation="MLKPETIHIPGPAGILETIHIPSEQVPARGVAVINHPNPLQGGT
                     NTNKVIQTAAKALSKLGFHCYLPNLRGVGGSEGTHDYGRGETQDCLAVIDYARAQHPE
                     APEFALSGFSFGGYVATFAAQVRIPDLLLLIGAAVCHYTDRPEPSAVPNVAKTLMIHG
                     AEDEVVEIEKALKWAEPQDLPVITIAGSTHFFHGKLIVLRDTILRFAPVCLNG"
     gene            complement(1756..2547)
                     /locus_tag="ACFJAG_000545"
     CDS             complement(1756..2547)
                     /locus_tag="ACFJAG_000545"
                     /EC_number="2.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine aminopropyltransferase"
                     /protein_id="HFC3979919.1"
                     /translation="MARHPYRRLRPAKSGFPEVGISEEGNIRSLHLGSDTVQSSMNLD
                     RPSELVLSYSRAMMGWLLFAERLPQHITQIGLGGGSFARWTDTYLPDTRQTAVDINPQ
                     VIAIARNLFELPFEGGKFEIIEADGAEYIKVFRHNTDIILVDGFDGEQIIDTLVEEPF
                     FRDCRNALSSDGIFVTNWWSGDKRYQRFIERLLSVFEGRVLELPAESHGNVAVMAFQS
                     SPKEQNIDKLKKRADKLSNAYGLDFHRMLAGLKASNPNNGKHFHL"
     gene            2713..2788
                     /locus_tag="ACFJAG_000546"
     tRNA            2713..2788
                     /locus_tag="ACFJAG_000546"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2746..2748,aa:Thr,seq:tgt)
     gene            2930..3721
                     /gene="panB"
                     /locus_tag="ACFJAG_000547"
     CDS             2930..3721
                     /gene="panB"
                     /locus_tag="ACFJAG_000547"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003864 - 3-methyl-2-oxobutanoate
                     hydroxymethyltransferase activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HFC3979920.1"
                     /translation="MITVNTLQKMKAAGEKIVMLTAYESSFAALMDDAGVDVLLVGDS
                     LGMAVQGRQSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFGAYQQSKEQAFAAAAEL
                     MAAGAHMVKLEGGVWMAETTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQA
                     LLNDAKVHDEAGAAVVLMECVPAELAKKVTETVSCPTIGIGAGADCDGQVLVMHDMLG
                     IFPGKTAKFVKNFMRGQSSIQAAVRAYVAEVKAKTFPAAEHIFAD"
     gene            3844..4680
                     /gene="panC"
                     /locus_tag="ACFJAG_000548"
     CDS             3844..4680
                     /gene="panC"
                     /locus_tag="ACFJAG_000548"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004592 - pantoate-beta-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HFC3979921.1"
                     /translation="MQIIHTIRELRTWRENIGKVAFVPTMGNLHEGHLALVREARKRA
                     DNVVVSIFVNRLQFGQGEDFDKYPRTLQQDADKLAAEGVAVVFAPDEKELYPNVEQRY
                     NVEPPHLQNELCGKFRPGHFRGVATVVSKLFNIVLPDVACFGKKDYQQLAVIKGLTED
                     LNFDIEIVPVDTGRAADGLALSSRNRYLSVGERAEAPRLYRELQAVAESLKQAGLDYA
                     GLERQAADHLTAAGWLVDYVEIRRADTLEMARAGDKKLVVLAAARLGTTRLIDNVEVG
                     LP"
     gene            5007..6845
                     /locus_tag="ACFJAG_000549"
     CDS             5007..6845
                     /locus_tag="ACFJAG_000549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HFC3979922.1"
                     /translation="MLPARFTILSVLAAALLAGQAYAAGAADVELPKEVGKVLRKHRR
                     YSEEEIKNERARLAAVGERVNRVFTLLGGETALQKGQAGTALATYMLMLERTKSPEVA
                     ERALEMAVSLNAFEQAEMIYQKWRQIEPIPGEAQKRAGWLRNVLREGGNQHLDGLEEV
                     LAQSDDVQKRRIFLLLVQAAVQQGGVAQKASKAVRRAALKYEHLPEAAVADAVFGVQG
                     REKEKAIEALQRLAKLDTEILPPTLMTLRLTARKYPEILDGFFEQTDTQNLSAVWQEM
                     EIMNLVSLRKPDDAYARLNVLLEHNPNANLYIQAAILAANRKEGASVIDGYAEKAYGR
                     GTGEQRGRAAMTAAMIYADRRDYAKVRQWLKKVSAPEYLFDKGVLAAAAAAELDGGRA
                     ALRQIGRVRKLPEQQGRYFTADNLSKIQMLALSKLPDKREALIGLNNIIAKLSAAGST
                     EPLAEALAQRSIIYEQFGKRGKMIADLETALKLTPDNAQIMNNLGYSLLSDSKRLDEG
                     FALLQTAYQINPDDTAVNDSIGWAYYLKGDAESALPYLRYSFENDPEPEVAAHLGEVL
                     WALGERDQAVDVWTQAAHLTGDKKIWRETLKRYGIALPEPSRKPRK"
     gene            6985..7566
                     /locus_tag="ACFJAG_000550"
     CDS             6985..7566
                     /locus_tag="ACFJAG_000550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein LolB"
                     /protein_id="HFC3979923.1"
                     /translation="MKHTVSASVILLLTACAQLPQNNENLWQPSEHISSFAAEGRLAV
                     KAEGKGSYANFDWTYQPPVETININTPLGGTLGQLCQDRDGALAVDGKGNVYQAEGTE
                     DLSRQLVGFKLPIQYLHIWAEGRRVAGAPYRIRSDGILEQYGWTIGRTADSGGQVRTL
                     QLNNGNLNIRLVFTEIGMPSETETPERCAARTR"
     gene            7576..8421
                     /gene="ispE"
                     /locus_tag="ACFJAG_000551"
     CDS             7576..8421
                     /gene="ispE"
                     /locus_tag="ACFJAG_000551"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050515 - 4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase activity
                     [Evidence IEA];
                     GO_process: GO:0016114 - terpenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HFC3979924.1"
                     /translation="MNIADGRQAFPAPAKLNLDLRITGRREDGYHNIESIFCLIDLQD
                     TVYLKPRDDGKIILHNPVGGIPQEADLSYRAASLLQKYARNLAGVEIWLDKKIPTGAG
                     LGGGSSDAATVLLVLNRWWQCGLTQWRLIDLGAALGADVPFFIFGKNAFASGIGEKLI
                     GMDIPKQWYVIVKPPVHVSTAKIFTYEGLTRDSASSIMPTFQNLQPFRNDMQAVVFKE
                     YPEVWKAYSELSKYGSAMMTGSGACIFAAFQARNSAYNIYRQVSGLYEAYLAEGLSKH
                     PLLSV"
     gene            8429..8504
                     /locus_tag="ACFJAG_000552"
     tRNA            8429..8504
                     /locus_tag="ACFJAG_000552"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:8462..8464,aa:Gln,seq:ttg)
     gene            8517..8592
                     /locus_tag="ACFJAG_000553"
     tRNA            8517..8592
                     /locus_tag="ACFJAG_000553"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:8550..8552,aa:Gln,seq:ttg)
     gene            8760..9743
                     /locus_tag="ACFJAG_000554"
     CDS             8760..9743
                     /locus_tag="ACFJAG_000554"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004749 - ribose phosphate diphosphokinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0006015 - 5-phosphoribose 1-diphosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009156 - ribonucleoside monophosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009165 - nucleotide biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HFC3979925.1"
                     /translation="MAAYDSLMVFTGNANPELAQRVVRHLDISLGNASVSKFSDGEVA
                     VELLENVRGRDVFILQPTCAPTNDNLMEILTMADALKRASAGRITTAIPYFGYARQDR
                     RPRSVRVPISAKLVANMLYSAGIDRVLTVDLHADQIQGFFDIPVDNIYATPILLNDIK
                     QQRIENLTVVSPDIGGVVRARAVAKSLNADLAIIDKRRPKANVAEVMNIIGDIQGKTC
                     LIVDDMIDTANTLCKAAVALKERGAEGVLAYASHAVFSGEAVSRIASSEIDQVVVTDT
                     IPLSEAAKNCDRIRQVTIAGLLAETVRRISNEESVSYLFNEEVMTGSMLLP"
     gene            9810..10382
                     /locus_tag="ACFJAG_000555"
     CDS             9810..10382
                     /locus_tag="ACFJAG_000555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003755233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0008097 - 5S rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HFC3979926.1"
                     /translation="MTYEIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVD
                     HKTVFYALEKESFHTALIKLSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQLVR
                     IRVPLHIVNAENSQAVKLQGGRVSLLNTAVEVLALPANIPAFLDLDCAEVVAGDILHL
                     SDIKLPEGVESVSLKRNENLAVATVTGKKR"
     gene            complement(10508..11677)
                     /locus_tag="ACFJAG_000556"
     CDS             complement(10508..11677)
                     /locus_tag="ACFJAG_000556"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase family
                     protein"
                     /protein_id="HFC3979927.1"
                     /translation="MTAHKILPVLLPIILGVSHATAASPAPNRPTVHAAPTLQTPETL
                     TAAHIVIDLQSRQTLSAKNTNTPVEPAALTQLMTAYLVFKNMKSGNIQSEENLKIPES
                     AWASEGSRMFVRPGDTVSTDKLLKGMIALCANDAALTLADRLGNGSIENFVQQMNKEA
                     RRLGMKNTVFKNPTGLGREGQVSTAKDLSLLSEALMRDFPEYYPLFSIKSFKFENIEQ
                     NNRNILLYRDNNVNGLKAGHTESGGYNLAVSYSGNGRHILVITLGSESAETRASDNSK
                     LLNRALQAFDTPKIYPKGKTVAQIQISGGSKKTVRAGFLKEAYITLPHKEAKMAEQIL
                     ETIQPIPAPVKKGQILGKIKIRQNGHTIAEKEIVALENVEKRSRWQRLWTRLTGQ"
     gene            11826..13352
                     /gene="ilvA"
                     /locus_tag="ACFJAG_000557"
     CDS             11826..13352
                     /gene="ilvA"
                     /locus_tag="ACFJAG_000557"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004794 - threonine deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase, biosynthetic"
                     /protein_id="HFC3979928.1"
                     /translation="MNTPLPYSDYLIRILTASVYDVAVETPLEPARSLSVRLKNNILL
                     KREDLQPVFSFKIRGAYNKMSKLPKDALACGVIAASAGNHAQGVALSAQRLGCRAVIV
                     MPETTPKIKVDAVKSRGGEVVLRGVSYNDAYDYAMELAEQEGLTYIAPFDDPDVIAGQ
                     GTVGMEIVSQHPDPIRAVFVPIGGGGLAAGMAAFIKQVRPEIKVIGVQTNDSCCMKQS
                     VEAGEIVHLKDVGLFSDGTAVKVVGNGTFRLCKELLDEIITVDTDAVCGAVKDIFDDT
                     RSITEPAGALALAGLKAYIAREGAENQTLIAVTSGANMNFHRLRHVSERSELGEGNEG
                     IFAVTIPEERGSFLKFVNILGNRNITEFNYRYGGDEKAHIFVGLQAAGPQDLAVIGSR
                     LDEAGLPNVDLTNNEIAKIHIRYMVGGRTDKVGHERLVSFEFPERPGALARFLNHMQG
                     GWNITLFHYRNHGADYGRILVGIDVPPHDAAAFDGFLESLGYSYHEETQNAAYKLFLA
                     "
     gene            complement(13408..14484)
                     /locus_tag="ACFJAG_000558"
     CDS             complement(13408..14484)
                     /locus_tag="ACFJAG_000558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/molybdate ABC transporter ATP-binding
                     protein"
                     /protein_id="HFC3979929.1"
                     /translation="MSITIQNLNKKRFGNFHALKNINLNVPAGKLVSLLGPSGGGKTT
                     LLRIIAGLENADGGQILFDGQDVTAKHVRERKVGFVFQHYALFRHMNVFDNVAFGLTV
                     LPKPERPSKGQIRAKVEELLKLVQLSHLAKSYPHQLSGGQRQRIALARALAVEPKLLL
                     LDEPFGALDAKVRKELRTWLRDIHHNLGVTSILVTHDQEEALEVSDEIVVMNHGKIEQ
                     TGSAEAIYRKPENAFVTEFLGEADAFEGRIEKGIWHYNGFAWKLDAQYKWQEQTATGY
                     IRPHEWQIAAEHETPMIRAEIEKIHAVGALTHVLVKHGKQDVHITLAGSDAARYPIAE
                     GKKLNLIPKQVYVFSQNELIEYSI"
     gene            complement(14481..15341)
                     /gene="cysW"
                     /locus_tag="ACFJAG_000559"
     CDS             complement(14481..15341)
                     /gene="cysW"
                     /locus_tag="ACFJAG_000559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015419 - ABC-type sulfate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter permease subunit CysW"
                     /protein_id="HFC3979930.1"
                     /translation="MKPYSANPNLTEPRRLRMLLIAAALGFLLLMLVVPLVAVFYEAL
                     KGGWDLYLKSLSDPEAWSAVKLTLITALIAVPVNAVLGVAMAWLLTRFDFLGKQLLTT
                     LLDLPFSVSPVVAGLMFVLLFGAHTALGSRLEAQGIQIIFAIPGIVLTALFVTFPFAA
                     REIIPLMQTQGDSEEQAALVLGASGWQMFWRVTLPNIKWTLLYGIILTNARAMGEFGA
                     VSVVSGHIRGETNTIPLLVEIFYNEYNFTGAFSLSGVLALLALATLAVQNIITKLQDK
                     KLAAAERNAV"
     gene            complement(15530..16368)
                     /gene="cysT"
                     /locus_tag="ACFJAG_000560"
                     /pseudo
     CDS             complement(15530..16368)
                     /gene="cysT"
                     /locus_tag="ACFJAG_000560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222661.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015419 - ABC-type sulfate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter permease subunit CysT"
     gene            16554..16886
                     /locus_tag="ACFJAG_000561"
     CDS             16554..16886
                     /locus_tag="ACFJAG_000561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979931.1"
                     /translation="MQILSFQADIAERMLEGTEGESVNENAQFVRTDNGYWIAWHEGV
                     AALLAPDTPPGIPCFWVEGAESLEELCAMVERGEFDEVEEFDGDDDAWLEAAKDCGHH
                     GDACACGH"
     gene            17213..17722
                     /locus_tag="ACFJAG_000562"
     CDS             17213..17722
                     /locus_tag="ACFJAG_000562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003662333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxyl methyltransferase
                     family protein"
                     /protein_id="HFC3979932.1"
                     /translation="MTMILSILSLFFIIRLLFLAVSIKHEKALIAKGAKQYGKTNSTV
                     LAAVHTLYYLACFVWVWLSDTAFNGISLIGTLTVMASFVILSLIIKQLGEIWTVKIYI
                     LPNHQINRSWLFKTFRHPNYFLNIIPELIGIALLCQAWYVLLIGLPIYLLVLFKRIRQ
                     EEQAMATLF"
     gene            complement(17952..18533)
                     /locus_tag="ACFJAG_000563"
     CDS             complement(17952..18533)
                     /locus_tag="ACFJAG_000563"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019957326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HFC3979933.1"
                     /translation="MEHKLPQLPYGPDALSPHLSKETLEFHYGKHHQTYITNLNNQIK
                     GTEFENLPLEEIVKKSSGGVFNNAAQTWNHTFYWLGFTPKGQGKPAGELAAAIDAKWG
                     SFEKFQEAFNACAAGTFGSGWAWLVKTPVGGLDLISTSNAATPLTTENTPLLTCDVWE
                     HAYYIDYRNSRPNYLKGFWEIVNWDEVAKRFAA"
     gene            18696..20102
                     /gene="dnaB"
                     /locus_tag="ACFJAG_000564"
     CDS             18696..20102
                     /gene="dnaB"
                     /locus_tag="ACFJAG_000564"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HFC3979934.1"
                     /translation="MNDYAAMPPEGREVGALSLPPHSMEAEQSVLGGLMLENPAWDRI
                     ADVVSGEDFYRHEHRLIFRSIAKLINEGRPADVITVQEDLQRNEELEAAGGFEYLITL
                     AQNTPSAANIRRYAEIVRERSIMRQLAEVGTEIARSAYNPQGRDAGRLLDEAENKVFQ
                     IAESTAKSKQGFLEMPDLLKEVVQRIDMLYSRDNPDEVTGVPTGFIDLDKKTSGLQPG
                     DLIIVAGRPSMGKTAFSINIAEYVAIEKHLPVAVFSMEMGGAQLVMRMLGSVGRLDQS
                     VLKTGRLEDEHWGRLNEAVVKLSDAPMFIDETPNLTALELRARARRLARRFDGRLGLI
                     VIDYLQLMAGSGRSDNRASELGEISRSLKALAKELQVPIIALSQLSRTVEQRTDKRPM
                     MSDLRESGAIEQDADLIMFMYRDEYYNQDSPMKGLAECIIGKHRNGPVGKIFLTWTGQ
                     FTKFDNAAYVPEEAKIED"
     gene            20257..20922
                     /locus_tag="ACFJAG_000565"
     CDS             20257..20922
                     /locus_tag="ACFJAG_000565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015627 - type II protein secretion
                     system complex [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GspH/FimT family pseudopilin"
                     /protein_id="HFC3979935.1"
                     /translation="MCTRKQQGFTLTELLIVMAIAAIMATIALPNMSGWIASRRIASH
                     AEQVANLLRFSRGEAVRLNLPVYICPAQVKKDGTVNNQCDFGKKGQGMLAFGDKNDNK
                     AYDGDTKDVFLRSVVLNDDINDKRINYTFNHIAFGQIQPTAERVVWTFNQNGTFGYLP
                     DQNLKNNSKFVYSDGYIQIVLTDARAVSDADRKFRSAVVLIDSSGRVEVCRKNDARAV
                     CKH"
     gene            20954..21562
                     /gene="pilV"
                     /locus_tag="ACFJAG_000566"
     CDS             20954..21562
                     /gene="pilV"
                     /locus_tag="ACFJAG_000566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus modification protein PilV"
                     /protein_id="HFC3979936.1"
                     /translation="MKNNDCLRLKNPQSGMALIEVLVAMLVLTIGILALLSVQLRTVA
                     SVREAETQTIVSQITQNLMEGMLINPTIDPDGNKKNYNLYTESYTSTSSDGDFALDKL
                     KSKKDLAKAQLDRFGYELKNALPDAVAIRYAVCKDSSGDAPTLSGNTFSSNCDNKANG
                     DTLIKVLWVNDSAGDSDISRTNLEVSGDNIVYTYQARVGGRE"
     gene            21559..22521
                     /locus_tag="ACFJAG_000567"
     CDS             21559..22521
                     /locus_tag="ACFJAG_000567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilW family protein"
                     /protein_id="HFC3979937.1"
                     /translation="MKRKMLNVPKGGYDGMKGFTIVEFLVAGLLSVIVLIAVVSSYFT
                     SRKLNDAANERLAEQQDLRNAATLIVRDARMAGSFGCFNMSEHTEKDVVSDVAQKNRL
                     FSLKMNSTNKVISNGTDNKLIPIAESPNIRYQGFTHRPNALIFQYGIDDVNASADTTV
                     VSSCAAISKPGKQILNLEDVKKELQIVSQDKEQNGNIARQRHVVNAYAVGRFGNEEGL
                     FRFQLNEKGEWGNPQLLAKKIKRMRVRYIYVSGCPEDEDAGKEEQFKYTDKFDSSVTP
                     AGVEVLLDSGGSDAKIAASSDNIIYAYRINATIRGGNVCANRTL"
     gene            22500..23096
                     /locus_tag="ACFJAG_000568"
     CDS             22500..23096
                     /locus_tag="ACFJAG_000568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilX N-terminal domain-containing pilus assembly
                     protein"
                     /protein_id="HFC3979938.1"
                     /translation="MRKQNTLTGIPTSDGQRGSALFIVLMVMIVVAFLVVTAAQSYNT
                     EQRISANESDRKLALSLAEAALREGEFQVLDLEYTADSKVTFSENCEKGLCTAVNVRT
                     NNVNEESFGNIVVQGTSTVEAVKRSCPANSASLCIDNQGVEYKKGTGNVSKMPRYIIE
                     YLGVKNGQNVYRVTAKAWGKNANTVVVLQSYVGNNDEQ"
     gene            23098..23571
                     /locus_tag="ACFJAG_000569"
     CDS             23098..23571
                     /locus_tag="ACFJAG_000569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilX family type IV pilin"
                     /protein_id="HFC3979939.1"
                     /translation="MEQKGFTLIEMMIVVTILGIISVIAIPSYQSYIEKGYQSQLYTE
                     MVGINNVLKQFILKNPQDDNDILKSKLEIFVSGYKMNPKIAKKYSVSVHFVNKEKPRA
                     YKLVGVPNARTGYTLSVWMNSVGDGYKCRDAASAKVYKEQLSGDGGCEALSNRKK"
     gene            complement(24183..24628)
                     /locus_tag="ACFJAG_000570"
                     /pseudo
     CDS             complement(24183..24628)
                     /locus_tag="ACFJAG_000570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686491.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:1902495 - transmembrane transporter
                     complex [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AzlC family ABC transporter permease"
     gene            24794..25246
                     /gene="dut"
                     /locus_tag="ACFJAG_000571"
     CDS             24794..25246
                     /gene="dut"
                     /locus_tag="ACFJAG_000571"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004170 - dUTP diphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006226 - dUMP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0046081 - dUTP catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HFC3979940.1"
                     /translation="MNIEVEMKVLDERMADFIPAYATEGSAGLDLRACLDEEVVLQPG
                     GTLLVPTGLAIYLANPAYAAVLLPRSGLGHKHGIVLGNLVGLIDSDYQGELKVSLWNR
                     SSEPFTVKPFERIAQMVIVPVVQAGFKRVEEFVGSSRGEGGFGSTGSH"
     gene            25324..26511
                     /gene="dapC"
                     /locus_tag="ACFJAG_000572"
     CDS             25324..26511
                     /gene="dapC"
                     /locus_tag="ACFJAG_000572"
                     /EC_number="2.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009016 - succinyldiaminopimelate
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinyldiaminopimelate transaminase"
                     /protein_id="HFC3979941.1"
                     /translation="MNTLLNRLKPYPFARLREAMQGISAPEGMEAVPLHIGEPKHPTP
                     KVITDALTASLRELEKYPLTAGLPELRQACANWLKRRYDGLTVNPDNEILPVLGSREA
                     LFSFVQTVLNPVSDGLKPVIVSPNPFYQIYEGATLLGGGEIHFANCPAPSFNPDWRSI
                     SEEVWERTKLVFVCSPNNPSGSVPDLDGWREVFDLQDKYGFIIASDECYSEIYFDGNK
                     PLGCLQAAAQSGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDAELLKNFLLYRTYHGSA
                     MSIPVQRASIAAWNDEQHVIDNRRMYQEKFERVIPILQQVFDVKLPDASFYIWLKVPN
                     GDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVADVATCVKAAETIVS
                     LYQ"
     gene            26822..27601
                     /gene="yaaA"
                     /locus_tag="ACFJAG_000573"
     CDS             26822..27601
                     /gene="yaaA"
                     /locus_tag="ACFJAG_000573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide stress protein YaaA"
                     /protein_id="HFC3979942.1"
                     /translation="MFFVLSPAKNLNEKDPCPVSEFTQPDLLAESEILMRQLRELAPQ
                     QIAELMHVSDKIALLNAERNAAWHTPFTPENAKQAVFMFNGDVYEGMDANTLNTNQIQ
                     YLQNHVRLLSGLYGLMRPLDLMQPYRLEMGTAFANLRGKNLYEFWGDIITNLLNDTLA
                     QAGSNTLVNLASQEYFKSVNTKKLRARLITPIFKDEKNGKYKIISFYAKRARGLMVRY
                     AAEHNITDPEMLKNFNYEGYAFNDAASNESEWVFMRSEQIK"
     gene            27684..27774
                     /locus_tag="ACFJAG_000574"
     tRNA            27684..27774
                     /locus_tag="ACFJAG_000574"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:27718..27720,aa:Ser,seq:tga)
     gene            27852..27938
                     /locus_tag="ACFJAG_000575"
     tRNA            27852..27938
                     /locus_tag="ACFJAG_000575"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:27886..27888,aa:Ser,seq:cga)
BASE COUNT         6830 a         6520 c         7719 g         6887 t
ORIGIN      
        1 aattatgttt tgatatgccg tctgaaaagt ttgtgaaaaa cggttacaat ccgccgcatg
       61 aaaaaacgca ataatcctct tccgctgttg aacggtgtca aacccagtta tttggtgctg
      121 ccgcatgaaa agcagtttta cgggctgccg ctgctgcatt ttctgtgcat ccgctttcct
      181 tttgtgggtg cggacgattg gcggaggcgg ttgaacagcg gttttgtggt cggttcggat
      241 ggtgcggcgt tggacgaaca ttctttgttc gagccgggta agacgatgtt ttattatcgg
      301 gaaaccagca gtgaggatga gccgcgtatt ccgtttgaag aaaaaatttt gcatattgat
      361 gagcatttga ttgtggtgga caagccgcat tttctgcccg tcatccccgg cgggcgtttt
      421 ttgcgggaaa cgctgctcac acgtctgcgc ctgcaccctg aattgcagca tttgaatgtt
      481 gaagacatta cgccgattca ccgcttggac aaggatacgg caggcgtgat gctgctgtcg
      541 cacaatcctg ccacgcgcgg ggcttatcag acgatgtttc aaaacaaaac ggtatggaaa
      601 acgtatgagg cgcttgcgcc gacaaggacg gatttgccgt atccgctcga tgtggtttcg
      661 cgtttggcga ggggggagaa attttttacg acgcaagagg ccgaaggcga accaaacgca
      721 catacgacgg tcgaactgat tgaaaacagg ggggaattca gcctttaccg cctcacgccg
      781 cataccggca agaaacacca gttacgcgtg catatgatgg gtttgggtat gccgctgttg
      841 aatgacgcgt tctatcccgt gccgtctgaa gcgggtagcg aggattatcg gaaacctttg
      901 aagcttttgg caaaaaagat tgcgtttgca gatcctttgt cgggtcggga aagggtgttt
      961 tgcagcgggt tttgcctgta atgagaggga acgcaaaccc gtatcggcag atgccgccgg
     1021 atacgggttt gatattatcg atgctgtctg aaaggggctt tatccgttca ggcatacggg
     1081 tgcgaagcgg aggatggtgt cgcgcaggac gatgagtttg ccgtgaaaga agtgcgtcga
     1141 accggcgatg gtaatgacgg gcaaatcttg cggttcggcc catttcagtg ctttttcgat
     1201 ttcgacgacc tcatcttccg cgccgtgtat catcagcgtt ttggcaacgt tgggaacggc
     1261 ggacggctcg gggcggtcgg tatagtggca gactgccgca ccgatgagca gcaataaatc
     1321 gggtatgcgc acttgtgcgg caaatgtggc gacatagccg ccgaaggaaa agccggataa
     1381 ggcaaattcc ggggcttcgg gatgttgggc gcgggcatag tcgatgacgg cgaggcagtc
     1441 ttgcgtttcg ccgcgtccgt aatcatgtgt gccttcgctg ccgcctacgc cgcgaaggtt
     1501 gggaaggtag cagtggaagc cgagcttgct caatgctttg gcggcggttt ggatgacttt
     1561 gttggtgttc gtcccgcctt ggagggggtt ggggtggttg atgacggcaa caccgcgtgc
     1621 cggtacttgt tcggacggga tatggatggt ttctaaaatg ccggcagggc cgggtatgtg
     1681 tatggtttcg ggtttcagca taatggtttc ctcttgattt tccgcatatt ccgatgcagc
     1741 cgcgaagatg gcggcttaaa ggtggaaatg cttgccgttg ttggggttgg acgctttcag
     1801 gccggcgagc atgcggtgga agtccaatcc gtatgcgttg ctcagtttgt cggcacgttt
     1861 tttgagtttg tctatgtttt gctctttggg gctgctttgg aaggccatta ccgcgacatt
     1921 gccgtggctt tcggcaggaa gttccaatac gcgcccttca aaaacgctca acaaccgttc
     1981 gatgaagcgt tgatagcgtt tgtcgccgct ccaccagttg gtaacgaata tgccgtctga
     2041 agagagtgcg ttgcggcagt ctctgaaaaa cggttcttca accagcgtat cgatgatttg
     2101 ttcgccgtcg aatccgtcca ccaagatgat atcggtgttg tggcggaaga ctttgatgta
     2161 ttccgcaccg tctgcttcga taatttcaaa ttttccgccc tcgaaaggca actcaaacag
     2221 gttgcgggca atggcgatga cctgaggatt gatgtccacg gcggtttggc gcgtgtcggg
     2281 caggtaggtg tctgtccagc gtgcaaacga accgccgccc aagccgattt gggtgatatg
     2341 ttgcggcagg cgttccgcaa acagcagcca gcccatcatc gcgcggctgt aagagagcac
     2401 cagctcggac gggcggtcga ggttcatcga gctttgaacg gtgtcgctgc ccaagtgaag
     2461 cgaacggata ttgccttctt cggaaatacc gacttcggga aagccggatt ttgcaggacg
     2521 caggcggcgg tagggatgtc ttgccatcgg tgtgaacggt cggtttgaaa ggcggatatt
     2581 ttatcagaat gccgatgctt gttctgtttc aaattaattt tgttttaaat aagatactta
     2641 gtgtattttt atgagggggt cgaacaaatt tcttgccaaa gtgtgaagtt gcctgcataa
     2701 ttcgccttct ttgccggtat agctcagttg gtagagcacc tgacttgtaa tcagggggtc
     2761 ccgagttcga ctcttggtgc cggcaccaga tttgacagcc cgattgtgta aaacagtcgg
     2821 gctgttttgc atttgcggca cggtcggtgg cagggctgcg ggcatttcac tataatagcc
     2881 cgtttcaaac tgaaaaggcc gtctgaaaag ggcggggtaa caatatctga tgattactgt
     2941 gaacacactg caaaaaatga aggcggccgg cgagaaaatc gttatgctga ccgcttacga
     3001 atccagtttt gccgcgctga tggacgatgc cggcgtggat gtgctgttgg tcggggattc
     3061 tttgggaatg gcggttcagg ggcgacagtc gacgctgccg gtcagcctgc gcgatatgtg
     3121 ctatcacacc gaatgtgtag cacgcggtgc aaaaaatgcg atgattgtca gcgatttgcc
     3181 gtttggtgca tatcagcaga gtaaggagca ggcgtttgcc gccgccgccg aactgatggc
     3241 tgccggcgcg catatggtca aactcgaagg cggcgtgtgg atggcggaaa cgactgaatt
     3301 tctgcaaatg cgcggaattc cggtctgtgc ccacatcggt ctgaccccgc aatccgtgtt
     3361 tgccttcggc ggatataaag ttcaggggcg cggcggcaag gcgcaggcgt tgcttaacga
     3421 tgccaaggtg catgatgaag ccggagctgc cgtcgtactg atggaatgcg tgccggcgga
     3481 actggcaaaa aaggtaactg aaactgtttc ctgtccgacc atcggcatcg gggcgggcgc
     3541 ggattgcgac ggtcaggttt tggtgatgca cgatatgctc ggtattttcc cgggcaaaac
     3601 ggcgaaattc gtcaaaaact ttatgcgcgg gcaaagcagc atccaggctg cggttcgggc
     3661 gtatgttgcc gaagtcaaag ccaaaacctt ccctgctgcg gaacatattt ttgcagattg
     3721 aacaaggtct gctgccgatg ccgtctgaaa gccgtttcag acggcatttt gttttgccgt
     3781 gcgcggcgcg tataatcggc gcgttttgtc gggcaggaag cccgaaggat aaggattacc
     3841 gtaatgcaaa tcatacatac cattcgagaa ctgcgcacgt ggcgtgaaaa tataggaaag
     3901 gtggcatttg tgccgaccat gggcaatctg catgaagggc atcttgccct tgttcgcgaa
     3961 gccagaaaac gcgccgacaa cgttgttgtc agcatattcg tcaaccgctt gcaattcggt
     4021 cagggcgagg atttcgacaa atatccgcgt actttgcaac aggatgcgga caaacttgcc
     4081 gccgaaggcg ttgccgttgt tttcgcgccc gatgagaaag aactctatcc gaacgtggaa
     4141 cagcgttaca acgtcgaacc gccccatttg caaaacgaat tgtgcggcaa attccgcccc
     4201 ggccattttc gcggcgtggc gacggtggtg tccaagctgt tcaatatcgt tttgccggat
     4261 gttgcctgtt tcggcaaaaa agattaccag cagcttgccg tgattaaagg tttgaccgag
     4321 gatttgaatt tcgatatcga aattgtcccc gtcgatacgg ggcgggcggc ggacggtttg
     4381 gcactctcca gccgcaaccg gtacttgagc gttggggaac gcgccgaagc accgcgcctg
     4441 taccgcgagc tgcaggctgt tgccgaatcg ctgaagcagg ccggtttgga ttatgcgggt
     4501 ttggagcggc aggctgccga ccatttgacc gctgcgggct ggctggtcga ttatgtggaa
     4561 atccgccgcg ccgatacgct cgaaatggcg cgggcgggag ataagaaact ggtggtcttg
     4621 gccgccgccc gtctggggac gacgcgtctg attgacaatg tggaagtcgg cctgccttag
     4681 cccgccggag ccgggaatgc cgcctgaagc ggatttgcgt ttcagacggc attttgccgt
     4741 cggctgtgct tcggaataat gtcggaaaat agacggaatg aaataaattt ctttttgttc
     4801 aacaaattaa actgtcaaac caaataataa ggcaaggatt gtccggcatc gcatacaggc
     4861 aaaccgacgc aatctcaaaa cacagccctg ccttcgggcg ggttttgcaa atctacaaac
     4921 cgtttggctt gtgataaagt gacgccttgt ctagatactc aatatgccgt ctgaaggttc
     4981 ggacggatgt cggataaagg atgattatgt tacccgcccg tttcactatt ttatctgtcc
     5041 tcgcagcagc cctgcttgcc ggacaggcgt atgctgccgg cgcggcggat gtggagctgc
     5101 cgaaggaagt cggaaaggtt ttaaggaaac atcggcgtta cagcgaggaa gaaatcaaaa
     5161 acgaacgcgc acggcttgcg gcagtgggcg aacgggtcaa cagggtgttt acgctgttgg
     5221 gcggtgaaac ggctttgcag aaagggcagg cgggaacggc tctggcaacc tatatgctga
     5281 tgttggaacg cacaaaatcc cccgaagtcg ccgaacgcgc cttggaaatg gccgtgtcgc
     5341 tgaacgcgtt tgaacaggcg gaaatgattt atcagaaatg gcggcagatc gagcctatac
     5401 cgggtgaggc gcaaaaacgg gcggggtggc tgcggaacgt attgagggaa gggggaaatc
     5461 agcatctgga cgggttggaa gaggtgctgg cgcaatcgga cgatgtgcaa aaacgcagga
     5521 tatttttgct gctggtgcaa gccgccgtgc agcagggtgg ggtggctcaa aaagcatcga
     5581 aagcggttcg ccgtgcggcg ttgaagtatg aacatctgcc cgaagcggcg gttgccgatg
     5641 cggtgttcgg cgtacaggga cgcgaaaagg aaaaggcaat cgaagctttg cagcgtttgg
     5701 cgaagctcga tacggaaata ttgcccccca ctttaatgac gttgcgtctg actgcacgca
     5761 aatatcccga aatactcgac ggctttttcg agcagacaga cacccaaaac ctttcggccg
     5821 tctggcagga aatggaaatt atgaatctgg tttccctgcg taagccggat gatgcctatg
     5881 cgcgtttgaa cgtgctgttg gaacacaacc cgaatgcaaa cctgtatatt caggcggcga
     5941 tattggcggc aaaccgaaaa gaaggtgcgt ccgttatcga cggctacgcc gaaaaggcat
     6001 acggcagggg gacgggggaa cagcggggca gggcggcaat gacggcggcg atgatatatg
     6061 ccgaccgcag ggattacgcc aaagtcaggc agtggttgaa aaaagtgtcc gcgccggaat
     6121 acctgttcga caaaggcgtg ctggcggctg cggcggctgc cgaattggac ggaggccggg
     6181 cggctttgcg gcagatcggc agggtgcgga aacttcccga acagcagggg cggtatttta
     6241 cggcagacaa tttgtccaaa atacagatgc tcgccctgtc gaagctgccc gacaaacggg
     6301 aagccctgat cgggctgaac aacatcatcg ccaaactttc ggcggcggga agcacggaac
     6361 ctttggcgga agcattggca cagcgttcca ttatttacga acagttcggc aaacggggaa
     6421 aaatgattgc cgaccttgaa accgcgctca aacttacgcc cgataatgca caaattatga
     6481 ataatctggg ctacagcctg ctttccgatt ccaaacgttt ggacgagggt ttcgccctgc
     6541 ttcagacggc ataccaaatc aacccggacg ataccgccgt taacgacagc ataggctggg
     6601 cgtattacct gaaaggcgac gcggaaagcg cgctgccgta tctgcggtat tcgtttgaaa
     6661 acgaccccga gcccgaagtt gccgcccatt tgggcgaagt gttgtgggca ttgggcgaac
     6721 gcgatcaggc ggttgacgta tggacgcagg cggcacacct tacgggagac aagaaaatat
     6781 ggcgggagac gctcaaacgc tacggaatcg ccttgcccga gccttcccga aaaccccgga
     6841 aataatgcag gcccatcctt tcagacggca taaggtttgc cgggaagccg gggcattcgg
     6901 gcaaacggca cgcagttcgc acgcgttttg cacggcacgc cgcacccgtc ggccggcagg
     6961 atgacacccg ttaaggaaac tctgatgaaa cacaccgtat ccgcatcggt catcctgctt
     7021 ttgaccgctt gcgcgcaatt acctcaaaat aacgaaaacc tgtggcagcc gtccgaacac
     7081 atcagcagtt ttgcagcgga agggcggttg gcagtcaaag cggaagggaa aggttcgtat
     7141 gcaaatttcg attggacata ccaaccgccc gtggaaacca tcaatatcaa cacccctttg
     7201 ggcggcacgc tcggacagtt gtgtcaagac agggacggcg cattggcagt ggacggcaaa
     7261 ggaaatgtct atcaggcaga gggtacggaa gacttgagca ggcagctggt cggtttcaaa
     7321 ctgccaatcc aatatctgca tatctgggcg gaaggcaggc gtgtggcggg cgcgccttac
     7381 cgcatccgtt cagacggcat attggaacaa tacggttgga caatcggcag aaccgccgac
     7441 agtggggggc aagtccgaac gttgcaactg aataacggaa atttgaacat caggctggtt
     7501 ttcaccgaaa ttggaatgcc gtctgaaacc gaaaccccgg aacgctgtgc ggcgcgcacg
     7561 agataaggcg gacagatgaa tattgcggac ggacggcagg cgtttcccgc acctgcaaaa
     7621 ctgaatctcg atttgaggat taccggcagg cgggaagacg gttatcacaa tatcgaaagc
     7681 atattctgcc tgatagattt gcaggatacc gtatatttga aaccgaggga cgacggcaaa
     7741 atcatcctgc acaatcctgt cggcggaata ccgcaggaag ccgatttgag ctaccgtgcc
     7801 gcatcgttgc tgcaaaaata tgcgcgcaac cttgccggcg tggaaatatg gctggacaaa
     7861 aaaatcccga ccggcgccgg cttgggaggg gggagttccg atgccgcaac ggttttgctg
     7921 gtgttgaacc gttggtggca gtgtggtttg acgcagtggc ggctcattga tttgggtgcg
     7981 gctttgggtg cggacgtacc gttttttatt ttcggaaaaa atgcttttgc aagcgggata
     8041 ggtgaaaaac tgataggaat ggatattccg aaacagtggt atgttattgt caaacctccc
     8101 gtccacgttt ccaccgcaaa aattttcaca tacgaaggct tgacacggga ttctgcctca
     8161 agcataatgc cgactttcca aaacctgcaa ccgttcagaa acgatatgca ggcagtggta
     8221 tttaaagaat accctgaagt ttggaaagct tattccgagt tgtcgaaata cggttctgca
     8281 atgatgaccg gctcaggagc ctgtatattt gcagcatttc aagctaggaa tagcgcatac
     8341 aatatatacc gacaagtttc aggtttgtac gaggcatatt tggcagaggg tctttcaaaa
     8401 catcctttgt tgtccgtata aacattgttg gggagtcgtc aagcggttaa gacactggat
     8461 tttgattcca gcatgcgaag gttcgaatcc ttcctcccca gccaagccaa acaagttggg
     8521 gagtcgtcaa gcggttaaga cactggattt tgattccagc atgcgaaggt tcgaatcctt
     8581 cctccccagc cagacaaaag cgtgtaagcc tgcttacacg ctttttattt catagaaata
     8641 aaaatattga aacgcctttg tttgtgtcgg atgttgcagg tataatgccg ggcttggtac
     8701 aagcggaggg aagcattgtg ttttctgagc ggaagttaaa cataaaatca ggtgagaata
     8761 tggctgcgta cgacagtttg atggtattta caggcaatgc caatcccgaa ttggcacaac
     8821 gtgttgtcag gcatttggac atttctttgg gcaatgcttc cgtatccaag ttttcagacg
     8881 gcgaagttgc cgtcgaactg ttggaaaacg tacgcgggcg cgacgttttc atccttcagc
     8941 cgacctgtgc gccgaccaat gacaacctga tggaaatcct gacgatggcg gatgcactga
     9001 agcgtgcttc ggcaggtcgt attaccacag ccattccgta tttcggctat gcgcgccaag
     9061 accgccgtcc gcgttccgtc cgcgttccga tttctgccaa actggtggca aatatgctgt
     9121 attcggcagg gatcgaccgt gttttgactg tcgatttgca tgccgaccag attcaaggtt
     9181 tcttcgatat tccggtggac aatatttatg ccactccgat tttgttgaac gacatcaagc
     9241 agcagcggat tgaaaatctg accgtcgtca gcccggacat cggcggtgtc gtccgcgccc
     9301 gcgccgtggc aaaatctttg aatgccgact tggcaatcat cgacaaacgc cgcccgaaag
     9361 ccaatgtggc ggaagttatg aacatcatcg gcgatattca aggcaaaacc tgtctgattg
     9421 tggacgatat gattgacact gcaaatacgc tgtgcaaagc cgccgtcgcc ttgaaagagc
     9481 ggggggcgga aggtgttcta gcctatgcca gccacgccgt attctccgga gaggcggtca
     9541 gccgtattgc ctcatccgaa atcgaccagg tggtcgtaac cgataccatt cctttgtctg
     9601 aagcggctaa aaactgcgac cgtatccgtc aggtaacgat tgcaggtttg ttggccgaaa
     9661 ccgtccgccg cattagcaat gaagaatccg tctcatatct tttcaatgaa gaagtgatga
     9721 caggcagcat gttgctgccg taaccccgat gccgtcttaa gctggtcgcg gccgatgacg
     9781 gcgattttac ctaacttgga gtatttaaca tgacttatga aattcaagcc tctgttcgtg
     9841 aagcacaagg cactggtgcg agccgccgcc tgcgtcgcga aggccaaatc cccggtattc
     9901 tgtacggtga aggtcaagag cctgttgcca ttgccgtaga tcacaaaacc gtattttacg
     9961 cattggaaaa agaatctttc catactgcgt tgattaaatt gtctctgaac ggcgaaacca
    10021 aagacgttat cgtccgcgat ttccaaatgc acccgttccg ccgcgaagtc caacacatcg
    10081 acttccaagc tgtgaaagcc gatcaacttg tacgcatccg cgttcccctg cacattgtta
    10141 acgctgaaaa ttctcaagcc gttaaattgc aaggcggtcg cgtatctctg ctgaacacgg
    10201 ctgttgaagt gcttgcgttg cctgccaata tccctgcttt cttggatttg gattgtgccg
    10261 aagtggttgc cggcgacatt ttgcacttgt cagacatcaa actgcctgaa ggtgtagaaa
    10321 gcgtttccct gaaacgtaac gaaaatctgg ctgttgctac cgttaccggt aaaaagcgct
    10381 aacttacttc catcagcagg gcggcgcgta tgcaatacgt accgccctgt tgttttatgc
    10441 cgtctgaacc gtgtttcaga cggcatttct ttatttgttg gaaaagcggg atatttgaaa
    10501 cggcagatta ctgccctgtc agacgcgtcc aaagcctttg ccaccggctt cttttttcta
    10561 cgttttccag tgcgacgatt tctttttcgg caatggtatg tccgttttgc ctgattttga
    10621 tttttcctaa aatctgccct ttttttaccg gggcgggaat cggctgtatg gtttccaaaa
    10681 tctgttctgc cattttcgct tctttatgtg gcagagtgat gtaggcttct ttgaggaagc
    10741 ctgcgcggac ggtttttttg ctgcctccgg aaatttggat ttgggcaacg gttttgcctt
    10801 tcggatatat tttgggcgta tcgaaggcct gcaatgcccg gttcagcagc ttgctgttgt
    10861 ccgatgcgcg ggtttccgcc gattccgaac ctagtgtgat gacaaggatg tgcctgccgt
    10921 tgccggagta tgacacggca aggttgtagc cgccgctttc tgtgtgcccg gctttcaggc
    10981 cgtttacatt gttgtcccta tataaaagga tattgcggtt gttttgttct atgttttcaa
    11041 acttgaacga tttgatggaa aacagcgggt aatattccgg aaagtcgcgc atcaatgctt
    11101 cagacagcag ggagaggtct ttggcggtgg aaacctgtcc ttctctaccc aagcctgtcg
    11161 ggtttttgaa tacggtgttc ttcatgccca agcgtcgggc ttctttgttc atttgttgca
    11221 caaaattttc aatcgagccg ttgcccagcc ggtcggcaag ggttagggcg gcatcgtttg
    11281 cgcatagggc aatcatgcct tttaagagtt tgtcggtgct gaccgtatcg ccgggacgta
    11341 caaacattct gcttccttct gaagcccatg cggattcggg tatttttaag ttttcttcag
    11401 attggatatt tcccgatttc atgtttttga aaaccaaata tgcggtcatc agttgggtta
    11461 gtgccgccgg ttcgacaggg gtattggtgt ttttggcgga taaagtctgc ctgctttgaa
    11521 ggtcgataac gatgtgtgcc gccgtgaggg tttcgggtgt ttggagcgtg ggggcggcgt
    11581 gtaccgtcgg tctgttgggc gcgggcgatg cagccgttgc gtgagaaacg cctaagatga
    11641 tgggaagaag gacgggcagg attttatgtg ctgtcatgaa atattctaaa ttgtgtgagt
    11701 gtttcagcct gccgattata cgcttagggt gtctgatcgg gcggattttt cttgctttcg
    11761 cgccgtcttg ggcgtatggt tttgggtttt gcgattttaa taaaccgatt atcccgcatt
    11821 gaattatgaa cacgcccctt ccttattccg attacctcat ccgcatcctg acggcatctg
    11881 tctatgatgt agcggtcgaa acgcctttgg aaccggcacg cagcctttct gtacgtttga
    11941 aaaacaacat ccttttgaaa cgcgaagatt tgcagccggt tttttcgttc aaaatacgcg
    12001 gcgcgtacaa caaaatgtcc aagttgccga aagatgcgct cgcttgcggc gtgattgcgg
    12061 caagcgcggg caatcacgca caaggcgtgg cgttgtccgc acagcgtttg ggctgccgtg
    12121 ccgttatcgt catgccggag actacgccga aaattaaagt ggatgcggtt aaaagccgtg
    12181 gcggcgaggt ggttttgcgg ggtgtttcat acaacgatgc ctacgattat gcgatggagc
    12241 tggcggaaca ggaagggctg acctatatcg cgccgtttga cgatcccgat gtgattgcgg
    12301 gacaggggac ggtggggatg gaaattgtca gccagcatcc cgatccaatc cgcgccgtat
    12361 tcgtaccgat agggggcggc ggtttggcgg cgggcatggc ggcatttatc aaacaggttc
    12421 gtcccgaaat taaagttatc ggcgtacaga ccaacgattc ctgctgtatg aagcagtcgg
    12481 tcgaagcagg cgaaatcgtc catttgaaag atgtcgggct gttttcagac ggtacggcgg
    12541 tcaaagtcgt cggaaacgga accttccgcc tctgcaaaga acttttggat gaaatcatta
    12601 cagtcgatac cgatgcggtt tgcggcgcgg tcaaggatat tttcgatgac acgcgcagca
    12661 ttaccgagcc ggccggcgcg ttggcgttgg cgggtctgaa agcctatatt gcccgagaag
    12721 gtgcggaaaa ccaaaccctg attgccgtta ccagcggtgc gaatatgaat tttcaccgtt
    12781 tgcgccacgt ttcggaacgg agcgaattgg gcgagggcaa cgaaggtatt tttgccgtta
    12841 ccatccccga agaacgcggc agcttcctta agtttgtcaa tatattggga aataggaata
    12901 ttaccgagtt caactaccgc tacggcggcg atgaaaaagc gcatatcttt gtcggacttc
    12961 aagcggcagg cccgcaggat ttggcggtta tcggcagccg gttggatgag gcgggattgc
    13021 ccaatgtcga tttgaccaat aatgagattg ccaaaatcca tatccgctat atggtcggag
    13081 ggcggacgga caaagtaggg cacgagcgtc tggtcagttt tgagtttccg gagcgtccgg
    13141 gcgcgttggc gcgctttttg aaccatatgc agggcggttg gaacattacg ctcttccatt
    13201 accgcaacca cggtgcggat tacgggcgga ttttggtcgg tatcgacgtg ccgccgcacg
    13261 atgccgccgc atttgacggt ttcttggaaa gtctgggata cagctatcac gaggaaacgc
    13321 aaaatgccgc gtacaagctg tttcttgcct gacgtttgac acgcaatgcc gtctgaaagc
    13381 ctttcagacg gcattgcgct ttcagggtta aatcgaatat tcaatcaact cgttttgaga
    13441 aaaaacataa acctgtttcg gaattaagtt taattttttg ccttcggcga ttgggtagcg
    13501 cgcggcatcg ctgccagcca gtgtgatatg cacgtcttgt ttgccgtgtt tcaccaaaac
    13561 gtgcgtcaat gcgccgacgg cgtggatttt ttcgatttcg gcacggatca tcggggtttc
    13621 gtgttcggcg gcgatctgcc attcgtgcgg gcggatatag ccggtggcgg tttgctcctg
    13681 ccatttgtat tgcgcgtcca atttccacgc gaagccgttg taatgccaga tgcctttttc
    13741 gatgcgtcct tcaaatgcgt cggcttcgcc gaggaactcg gtaacgaagg cgttttcggg
    13801 tttgcggtaa atggcttcgg cactgccggt ttgttcgatt ttgccatggt tcatcacgac
    13861 gatttcgtcg gaaacttcga gggcttcttc ttggtcgtga gtcaccagaa tgctggttac
    13921 gccgaggttg tgatgaatgt cgcgcagcca ggtgcgtaat tctttgcgca ctttggcatc
    13981 cagcgcgccg aagggttcgt ccaaaagcag gagtttcggt tcgaccgcaa gcgcgcgggc
    14041 gagggcgatg cgctggcgtt gcccgccgga gagttggtgc ggataggatt tggcgaggtg
    14101 ggagagttgt acgagtttga gcaattcttc gactttggcg cggatttgtc ctttggacgg
    14161 gcgttcgggc ttgggcaata cggtcaaacc gaaagcgacg ttgtcaaaca cattcatgtg
    14221 gcggaagagg gcgtagtgtt ggaacacgaa accgactttg cgctcgcgca catgcttggc
    14281 ggttacgtct tggccgtcaa agagaatttg gccgccgtcg gcgttttcca gtccggcgat
    14341 aatgcgtaaa agtgtggttt tgccgccgcc ggagggaccg agcagggaaa cgagtttgcc
    14401 ggcggggacg ttgaggttga tgtttttcag cgcgtgaaaa ttgccgaagc gttttttgtt
    14461 taagttttga atggtaatac tcatactgcg ttcctttcgg cggcggcgag ttttttgtct
    14521 tgtaatttgg tgatgatgtt ctgcaccgcc agcgtcgcca gtgctaaaag tgccaatacg
    14581 ccggagaggg agaatgcgcc ggtgaagttg tattcgttgt agaagatttc gaccaaaagc
    14641 gggatagtgt tggtttcgcc gcgtatgtgt cccgatacca cgctgaccgc gccgaactcg
    14701 cccatcgcac gggcgttggt gaggatgatg ccgtagagca gcgtccattt gatgttgggc
    14761 agggtaacgc gccaaaacat ctgccaaccg cttgcgccga gtaccaatgc cgcctgttct
    14821 tcgctgtcgc cctgtgtctg cattaaaggg atgatttcgc gtgcggcaaa gggaaaggta
    14881 acgaacagcg ccgtcaaaac aatgccggga atggcgaaga taatctgtat gccttgcgct
    14941 tccagccggc tgcccaacgc cgtgtgcgcg ccgaacaata agacgaacat caaaccggca
    15001 accacgggcg atacggaaaa cggcaaatcg agcagggtgg tcagcaactg cttgccgaga
    15061 aagtcaaaac gggtcaacag ccacgccatc gccacgccca agacggcatt gacgggaacg
    15121 gcaatcagcg cggtaatcag cgtcaatttg acggcagacc acgcttcggg atcgcttaag
    15181 gatttcaggt acaaatccca accgcctttt aaggcttcgt agaatacggc gacgagcggc
    15241 acgaccagca tcagcagcag aaagcccagc gcggcggcaa tcagcaacat gcgcagccgg
    15301 cgcggttcgg tcaggttggg attggcggaa tagggtttca tggcggtggt gttctctggt
    15361 ttgttgttta aggtgttcgg atgccgtctg aaagggattg aggggtttca gctttcgtcg
    15421 gtcggattct tgaatccgac aaggttgctg aatcgcaaat gtttgtcgga tacaagtatc
    15481 cgacctacga attctgtgtt ttggggagcg gattcgtttt cagacgacct caacccttcg
    15541 cacccgaacg cctgcccaac gcccactgca gcacgttcag cgcaaacaga atcacaaacg
    15601 aaaccagcag cataaacaac gccaccgccg acgcgccctg cgcgtcgaat tgttccagct
    15661 tgcccgtaat aatcagcggc aggatttcgg aaatcatcgg aatgctgccc gcgataaaaa
    15721 tcaccgaacc gtattccccc gttgcccgcg cgaacatcat gcccgcgccg gtcaagagtg
    15781 ccggcgtgat ttccggcagc agcacgcggc ggaacgttgt gaaacggttt gcgcccaaag
    15841 tcgccgccgc ttcctcatat tcgcccgaca attcctccaa taccggctgc acggcgcgga
    15901 cgataaaggg caggctgacg acaaccagcg caatccaaat gccgacgggc gtaaacgcga
    15961 ttttgatgcc caaaggttcg aaaaaacggc ctatccaacc gttgggcgca tacagggccg
    16021 ccaacgcgat acccgtaacc gccgtcggca gcgcaaacgg caaatcaacc ggcgcgttcg
    16081 ccaggccctt gcccggaaat tcatagcgca ccaacaccca agccaccagt gtgccgaaca
    16141 cgacacattg gtcagcatcg cataaaacga catccgcaaa ctcagccgca ccgccgccag
    16201 cacgttcggc tcggcaatcg tgttccgaaa gccgccccag ccgatttccg ccgccttcgc
    16261 cgccatcatc gcaaacggca aaaccaccaa aagcgaaaag cacaatacgg tcagaccgag
    16321 gctgagtttg aagccgggca gtacgccggg tgttttgagc ggtaacataa aacaatgctg
    16381 aaaataagga aaaggaagga ctactttaac gatgccgcct gaaaaacgga aaaaatggaa
    16441 agtttggtgc aaagacgaat ttgttataaa gcggttggca gtttttcaag cgggcgcgat
    16501 gttctaaaat aacgctttgt tttgacggaa aaccatcata taaaggaaca cttatgcaga
    16561 ttttatcttt tcaggcggac attgcggaac gtatgctgga aggtacggaa ggcgagtcgg
    16621 tcaacgaaaa cgcacaattt gtccgtacgg acaacggcta ttggattgcg tggcatgaag
    16681 gcgtggcggc actgcttgcg cccgatacgc cgccgggcat tccctgtttt tgggtggaag
    16741 gggcggaaag ccttgaagag ttgtgtgcga tggtggaacg cggcgagttt gacgaagtgg
    16801 aagagtttga cggcgatgac gacgcgtggc tcgaagcggc taaagattgc ggacaccacg
    16861 gcgacgcttg cgcctgcgga cattaaaggc atggcaggct tgccgcaagg ggtgcaaggc
    16921 tttgccgttt tttaaataat cggcggattg catctgtttg caatgggcgg aacgcttccc
    16981 tttgtatttt attgaataaa aattatcttg gtattataat aaggcagcat caattatttt
    17041 gggactgcaa caaacgcaaa gcattgattt gcgccgattg caaacttatt atagcaggtt
    17101 gcggcgtaga cttgatggga attgtttata gagcatgata gtctgaaaca tattaattaa
    17161 aaataccatt aatccgattt atatttattt caatttcaat ggaaaaacat caatgacaat
    17221 gattttaagc attttaagcc tgttttttat cattagactg ttatttttag ccgtctccat
    17281 taaacatgaa aaagccttga ttgccaaagg ggcgaaacaa tacggaaaaa ccaattccac
    17341 ggtgcttgcg gcagttcata cgctttatta tttggcgtgt tttgtttggg tatggctttc
    17401 tgacactgct tttaatggca tatccttgat tggtacactg acggtgatgg cttcatttgt
    17461 gatattatca ttgattatta agcagttggg ggagatttgg acggttaaaa tctatatttt
    17521 gccaaatcat caaattaatc gttcgtggtt gtttaaaaca ttccgccacc cgaattattt
    17581 tttaaacatc atacccgaac tgattggcat cgccttatta tgtcaagcgt ggtatgtttt
    17641 attgattggc ctgcccattt atttgctggt cttatttaag cgtatccgac aagaagaaca
    17701 ggcgatggca acactttttt aacccgtttc atcaattaaa aatatatcga caaagagaac
    17761 cgtctatcaa ttaaatccat tcttatcatt ggggcaggct tattgtcatt gggcaagccg
    17821 tgacaaaagc ccgaacctgc aaaacttatc tataaggctg catcagtgtg tattgaaacc
    17881 ccgccttttt gacaacaaat gccgtctgaa gccttcagac ggcatttgtt cggtttggca
    17941 aagccggcgg cttatgcggc aaaacgtttg gcgacttcgt cccagttgac gatttcccaa
    18001 aaacctttca ggtagttggg gcggctgttg cggtagtcga tgtagtaggc gtgttcccac
    18061 acgtcgcaag tcaagagcgg cgtgttttca gtggtcagcg gcgtagcggc gttggaagtg
    18121 gaaatcaaat ccaatccgcc gacaggggtt ttcaccagcc acgcccaacc ggagccgaac
    18181 gtaccggccg cgcaggcatt gaacgcttct tggaattttt cgaagctgcc ccatttcgcg
    18241 tcgatggcgg cggccagttc gccggcaggc ttgccttggc ctttgggcgt gaaacccagc
    18301 cagtagaagg tgtggttcca agtttgggcc gcgttgttga acacgccgcc cgaagatttt
    18361 ttcacaatct cttccaaagg caggttttca aattcggtgc ctttgatttg attgttcagg
    18421 ttggtgatgt aggtttgatg gtgtttgccg tagtggaatt ccaaagtttc tttactcaga
    18481 tgcggggaca atgcgtccgg cccataaggc agttgcggca gcttatgttc cattttgtgc
    18541 tcctaatatt gttttaaatg ttgtattttg gcagtgttgc tgcaaacgaa tcggcagctc
    18601 acgcattcta cctgttttga gtgatggaaa ccaattaaac ctgctttgcg ttataataga
    18661 agattgcaat ttcggcacga cagattggat gtaccatgaa cgattacgca gctatgccgc
    18721 ctgaaggccg tgaggtcggc gcattgtcgc tgcctccgca ttcgatggag gcggaacaat
    18781 ccgttttggg cggtttgatg ctggaaaatc cggcttggga caggattgcc gatgtggttt
    18841 cgggagagga tttctaccgc cacgaacacc gcctgatttt ccgatccatt gccaaattaa
    18901 tcaatgaggg ccgtcccgca gatgtgatta cggttcagga agatttgcag cggaacgaag
    18961 aattggaagc ggcaggcgga tttgaatatc tgattacact ggcgcaaaac accccgtctg
    19021 ccgcaaacat ccgccgctac gccgaaatcg tacgcgagcg ttccattatg cgccaactcg
    19081 ccgaagtggg gacggaaatc gcccgcagcg catacaatcc gcaaggcagg gacgcggggc
    19141 ggcttttgga tgaggcggaa aacaaagtgt ttcaaatcgc cgaaagcacc gccaaatcca
    19201 agcagggctt tttggagatg cccgatttgc tgaaagaagt cgtacagcgc atcgatatgc
    19261 tttattcgcg cgacaatccc gatgaagtta ccggcgtacc gacagggttc atcgaccttg
    19321 ataaaaaaac ctcgggtctg cagcccggcg acctgattat cgtcgccggc cgcccgtcta
    19381 tgggtaaaac cgcgttctcc atcaatattg ccgagtatgt cgccattgaa aaacatttgc
    19441 ccgtcgccgt tttctcgatg gaaatgggcg gggcgcaatt ggtcatgcgt atgctcggtt
    19501 cggtcggacg cttggatcag agcgtcctga aaacaggcag gctggaagat gaacattggg
    19561 ggcgtttgaa cgaggcagtc gtcaaacttt ccgacgcgcc tatgtttatt gacgaaactc
    19621 cgaatctgac cgccctcgaa ttgcgcgccc gcgcccgccg cctcgcccgc cggtttgacg
    19681 gcagattagg cttgatcgtc atcgactacc tgcaactgat ggcgggatcc ggccgttccg
    19741 acaaccgcgc ttcagagctt ggcgaaattt cccgttccct caaagctttg gcaaaagaat
    19801 tgcaagtccc catcattgcc ttgtcgcaac tgagccgcac tgtcgaacag cgtaccgaca
    19861 aacgcccgat gatgtccgac ttgagggagt cgggggcaat cgagcaggat gccgacctga
    19921 ttatgtttat gtaccgcgac gaatactaca accaggactc acccatgaaa ggccttgccg
    19981 aatgtatcat cggcaaacac cgcaacggtc ccgtcggtaa aatcttcctc acatggacgg
    20041 gacaattcac caaattcgac aatgctgcct atgttcccga ggaggcaaag atagaagatt
    20101 aaatggctat ataaaaattt attaggcgga atcaggcaaa atcgtttaaa atcatgctta
    20161 gagattgccc taaaaaataa aacgcggtct tgaggcattt ttgcattcag tccgcagata
    20221 attgaaaaat acattacagt tgacgtccta ttgcttatgt gtacacgaaa acaacaaggt
    20281 ttcacgctaa cagagctgct catcgtgatg gccattgcag ccattatggc gacgatagcc
    20341 ctccccaata tgagtgggtg gattgcatca cgccgcattg ccagtcacgc ggagcaggtt
    20401 gccaaccttt tgcgtttttc caggggcgaa gccgtccggc tcaatctccc tgtctatatc
    20461 tgtcctgccc aagttaaaaa agacggtacg gtcaacaacc agtgcgactt cggcaagaag
    20521 gggcagggaa tgttggcttt cggcgacaaa aacgacaata aggcatatga cggcgatact
    20581 aaggatgttt ttctccgcag cgtggtattg aatgatgata tcaatgataa gcggattaat
    20641 tacaccttca atcatatcgc tttcggtcaa atacagccga ctgccgaacg tgttgtttgg
    20701 actttcaacc aaaacgggac attcggctat ttgcccgatc agaatctcaa gaataattcc
    20761 aaatttgttt attctgacgg ttatatccaa atcgtgctga cagatgcgag agcagtttca
    20821 gatgccgata ggaaattccg ttcggcggtg gttttgattg acagcagcgg cagggtcgaa
    20881 gtttgtcgta aaaacgatgc gcgcgccgta tgcaaacatt aatgactgtt ttagtcggtt
    20941 tgggaaataa aaaatgaaga ataatgattg cttgcgcctg aaaaatcccc agtccggtat
    21001 ggcgttgata gaagtcttgg tcgctatgct ggttctgacc atcggtattt tggcattgct
    21061 gtccgtacag ttgcggacgg tcgcttccgt cagggaagcg gaaacgcaaa ccatcgtcag
    21121 ccaaatcacg caaaacctga tggaaggaat gttgatcaat ccgaccattg atccggacgg
    21181 caacaagaaa aactataatc tttacactga gtcgtacacc tccacttctt ctgacggcga
    21241 ttttgcactt gataagctta aaagcaagaa ggatttggca aaggcccagt tggacaggtt
    21301 cggttatgaa ttgaaaaatg ccttgccgga tgcggtagct attcgttacg ccgtctgcaa
    21361 ggattcgtcg ggtgacgcgc cgacattgtc cggcaatact ttttcttcaa attgcgacaa
    21421 taaggcaaac ggggatactt tgattaaagt attgtgggta aatgattcgg caggggattc
    21481 ggatatttcc cgtacgaatc ttgaggtgag cggcgacaat atcgtatata cctatcaggc
    21541 aagggtcgga ggtcgtgaat gaaacgtaaa atgctaaacg taccaaaagg cggttatgat
    21601 ggtatgaagg gttttaccat tgttgaattt ctggttgcgg gcctgctcag tgtgattgtc
    21661 ctgatagcgg tcgtatcgag ttactttaca tcccggaaat taaatgatgc ggcaaacgag
    21721 cgtcttgccg agcaacagga tttgcggaat gcggcaacat tgattgtccg cgatgcaaga
    21781 atggcgggga gcttcggttg tttcaatatg tctgagcata ccgaaaagga tgttgtttcc
    21841 gatgtggcgc aaaaaaaccg tcttttttcc ttaaaaatga acagtacaaa taaagttatc
    21901 tccaacggta cagataataa acttatcccc atagcggaat ctccaaatat cagatatcag
    21961 ggttttaccc atcgccctaa cgcattgatt tttcaatacg gaatcgatga tgttaatgca
    22021 agcgccgata ctaccgtcgt cagcagctgt gccgcaatat cgaaaccggg caagcaaatc
    22081 cttaatttag aagatgtaaa aaaagaattg cagattgtga gtcaggataa ggagcaaaat
    22141 ggcaatatag cgcgtcaaag gcatgtggtc aatgcctatg cggtcggcag gtttggcaat
    22201 gaggaaggtt tgttccgctt ccaattgaat gaaaagggcg agtggggtaa tcctcagttg
    22261 ctcgcgaaaa agattaaacg tatgagagtg cggtatatct atgtttccgg ttgtcctgaa
    22321 gatgaagatg ccggcaaaga ggaacaattc aaatatacgg ataaattcga cagctctgtt
    22381 acgcctgccg gggtggaggt tttattggat agcggcggta gtgatgccaa gattgccgct
    22441 tcttcagata atattattta tgcttaccgt atcaatgcga caatacgcgg gggaaatgta
    22501 tgcgcaaaca gaacactttg acgggaatcc cgacttctga cggacagagg gggtccgcac
    22561 tgtttatcgt gctgatggtg atgatagtcg tggccttttt ggttgtaact gccgcccagt
    22621 cctacaatac cgagcagcgg atcagtgcca acgaatcaga caggaaattg gctttgtctt
    22681 tagccgaggc ggctttgagg gaaggcgaat ttcaggtttt ggatttggaa tatactgcgg
    22741 atagtaaggt tacatttagc gaaaactgtg aaaaaggcct gtgtaccgca gtgaatgtgc
    22801 ggacaaataa tgttaatgaa gagtcttttg gcaatatcgt ggtgcaaggc acgtccaccg
    22861 ttgaggccgt gaagcgttct tgccctgcaa attctgccag cctgtgcatt gacaatcagg
    22921 gagtggaata taagaaaggt acgggaaacg tcagcaaaat gccgcgctat attatcgaat
    22981 atttaggcgt gaagaacgga caaaatgttt atcgggttac tgccaaggct tggggtaaga
    23041 atgccaatac cgtggtcgtc cttcaatctt atgtaggcaa taatgatgag caataaaatg
    23101 gaacaaaaag ggtttacatt gattgagatg atgatagttg tcacgatact cggcatcatc
    23161 agcgtcattg ccataccttc ttatcagagt tatattgaaa aaggctatca gtcccagctt
    23221 tatacggaga tggtcggtat caacaatgtt ctcaaacagt ttattttgaa aaatccccag
    23281 gacgataatg atatcctcaa gagcaaactg gaaatatttg tctcaggcta taagatgaat
    23341 ccgaaaattg ccaaaaaata tagtgtttcg gtgcattttg tcaataagga aaaaccaagg
    23401 gcatacaagt tggtcggtgt tccgaacgcg aggacgggtt ataccttgtc ggtatggatg
    23461 aacagcgtgg gcgacggata caaatgccgt gatgccgctt cggcaaaggt ctataaagag
    23521 cagttgtccg gagacggtgg ttgtgaagcc ttatccaacc gtaagaaata gaatgggttt
    23581 gaagatgccg tctgaaaatt ggttttcaga cggcattttt atgggtatag tggattaaca
    23641 aaaatcagga caaggcggcg aagccgcaga cagtacaaac agtacggaac cgattcactt
    23701 ggtgcttcag caccttaggg aatcgttctc tttgagctaa ggcgaggcaa cgccgtaccg
    23761 gtttttgtta atccactata catcccgtca ttcccacgaa agtgggaatc tagaaattta
    23821 atgttgcggc actagccaaa aaaaccgaaa ccgaacggac tagattcccg cctgcgcggg
    23881 aatgacggat tttaggttgg ggtcatttat tggaaaaagc agaaaccgct ccgccgtcat
    23941 tcccacgaaa gtgggaatcc ggttttttga gtttcagtca tttccgataa attgccttag
    24001 cattgaatgt ctagattccc gcctgagcgg gaatgacgaa tccatccgta cggaaacctg
    24061 caccacgtca ttcccgcgaa agtgggaatc caggatgcag ggttgggaaa accgtgttat
    24121 ccgataagtt tccgcaccga caggtctaga ttcccgcctg cgcgggaatg acgattcact
    24181 ataatgtaga ggataaagca tgcgcccata taagaaggca tattgaatgc aggcaaaccg
    24241 gctgctttcc gtttttggat ttcggagaat gccatggccc ggctttcatc acacataaaa
    24301 agcagcgcgg gtacggtttt tttcagcggt atttctttca tgtgcgtggc aagcgccgcc
    24361 cccatcagga tatgccgcga attaatcata aaggttatgg tggcgataag cagtatcggc
    24421 agaggttccg cccacaggtt gaccgtggca aattcggagc cgccggcgaa gttcatcccc
    24481 gtcatcagca gcatttccag ccgggccata cctttttgcc cgcctgcatt ccgagtatta
    24541 atgcccaagg caaaagccca atcagcatgg gcgaactttc tttgatgccg cgtatgaatt
    24601 catcacgtgg agaggctgtg tgcgtcatgt taatgtttat atatgaagag acggggcggt
    24661 atcatacaca ggcagaatgt ttttgacagt cgaggatggt ttcaaaacaa aagcagtttg
    24721 ttgtgtttca gcgtaaacac ggcttgtgta taatctccaa tctttgaaac cggccgtatg
    24781 caggagcagg acgatgaata ttgaagtaga aatgaaagtg ttggacgaga ggatggcgga
    24841 ttttatccct gcctatgcga cggagggttc tgcaggtttg gatttgcgcg cctgtttgga
    24901 tgaggaagtc gttttgcagc cgggcggaac gttgcttgtg ccgacaggtt tggcaattta
    24961 tttggcgaat cccgcatatg ccgctgtttt gctgccccgt tccggcttgg ggcataaaca
    25021 cggcattgtt ttgggcaatt tggtcggctt aatcgactcc gattatcagg gagaattgaa
    25081 ggtgtcgtta tggaacagaa gcagcgaacc gtttactgtc aaaccgttcg agcgtatcgc
    25141 acaaatggtt atcgtgccgg tcgtacaggc gggcttcaaa cgtgtcgagg aatttgtcgg
    25201 aagcagccgg ggtgagggcg gcttcggcag tacgggttct cactaaagat atagaatgcc
    25261 gtctgaaggg cacgtcagct tcagacggca tatcttccga tataccgata accggagaaa
    25321 atcatgaata ccttactcaa ccggctcaaa ccatatccct ttgcccgact gcgcgaggcg
    25381 atgcagggca tttccgcgcc tgaaggcatg gaagccgtcc cactgcatat cggcgaaccg
    25441 aaacacccga caccgaaagt cattacggat gcgctgaccg cctcattgcg cgagttggaa
    25501 aaatatccgc tgactgcggg tctgcctgaa ctgcgtcagg cgtgtgcgaa ctggttaaaa
    25561 cgccgttatg acggcttgac ggtcaatccg gataatgaaa ttctgccggt tttgggcagt
    25621 agggaggcgt tgttttcttt tgttcaaacc gtgttgaacc ctgtttcaga cggtctaaaa
    25681 cccgtaatcg tcagcccgaa tcccttttat cagatttacg aaggtgcgac acttttgggc
    25741 ggcggtgaaa tccattttgc caattgcccc gcgccgtctt tcaaccccga ttggcgcagt
    25801 atttccgaag aggtttggga acgcaccaaa ctggtgttcg tctgctcgcc caacaacccc
    25861 agcggcagcg tgccggattt ggacggatgg agagaagttt ttgatttaca ggataaatat
    25921 ggtttcatta ttgcctcgga tgaatgctat tccgaaatct atttcgacgg caacaaacct
    25981 ttgggctgcc tgcaagccgc cgcacagtcg gggcgaagca ggcaaaaatt gcttatgttt
    26041 accagtttgt ccaagcggtc caatgttccg ggcctgcgtt ccggttttgt cgccggtgat
    26101 gcggaactgc ttaagaactt tctgctttac cgaacctatc acggcagcgc aatgagcatt
    26161 cccgtgcagc gtgccagtat tgccgcctgg aatgacgaac aacacgttat tgacaaccgc
    26221 cgtatgtatc aggaaaaatt tgagcgcgtt attcccattt tgcaacaggt atttgacgtt
    26281 aaattaccgg atgcctcgtt ttacatctgg ttgaaagtcc ccaatggcga cgatttggca
    26341 ttcgcacgca atttatggca aaaagccgct atccaagtat tgcccggacg ctttttggca
    26401 cgggataccg aacagggcaa tcccggggaa ggttatgtgc ggattgcttt ggttgccgat
    26461 gtcgcaactt gtgtcaaagc tgcggaaacc attgtttccc tatatcagta aagaataaaa
    26521 aataccgtct gaacttttgt tcagacggca tttttcaata ttttacggtt gaatttgcta
    26581 taacggtatt tatagtggat taacaaaaat caggacaagg cggcgagccg aagacagtac
    26641 aaatagtacg gaaccgattc acttggtgct tcagtacctt agagaatcgt tctctttgag
    26701 ctaaggcgag gcaacgctgt actggtttaa atttaatcca ctatacttca cttttaatcg
    26761 gcttgcccgc aaacacgttt aaacttaaaa tccccatgtt tgacacaata ccgagcggat
    26821 tatgtttttt gtcctttccc ctgcgaaaaa ccttaacgaa aaagaccctt gccctgtcag
    26881 cgagtttacc caacccgatc ttttggcgga atctgaaatc ctgatgcgcc aactgaggga
    26941 gcttgcccct caacaaattg cagagttgat gcacgtttcc gacaaaatcg cacttctaaa
    27001 cgccgaacga aatgcagcgt ggcacacgcc gtttacgccg gaaaacgcca aacaggcagt
    27061 ctttatgttc aacggcgatg tttacgaagg tatggatgca aacacattga ataccaatca
    27121 aatacaatat ctgcaaaacc atgtccgcct gctgtccggc ttgtacggtc ttatgcgtcc
    27181 actggatttg atgcagccct accgcctgga aatgggaacg gcatttgcca atttgcgcgg
    27241 caagaatttg tatgagtttt ggggcgacat cattaccaac cttttaaatg acacgcttgc
    27301 ccaagcaggc agcaatacgc ttgtcaacct tgcctcacag gaatatttca agtccgtcaa
    27361 cacgaaaaaa cttcgggcgc ggctgattac cccgatattt aaagacgaaa aaaacggtaa
    27421 atataaaatc atcagtttct atgccaaacg cgcgcgcgga ttgatggtgc gctatgcggc
    27481 agaacacaat attaccgatc ctgaaatgct gaaaaatttt aattacgaag gctacgcatt
    27541 caatgacgcg gcttccaatg aaagcgaatg ggtgtttatg cgttcggaac aaataaagtg
    27601 aaaacaataa attaagtatt tcccaaaaaa agtgcttggc aaaatgtata aacttcatta
    27661 ttattcctac tcttcaagaa gacggaagcg tggcagagcg gtttaatgca acggtcttga
    27721 aaaccgtcga gggttgatag ccctccgtga gttcgaatct caccgcttcc gccaatcctt
    27781 gaagtcaaaa accaaataaa aatgaagtag cataaagcat cggcattttt atttggtttt
    27841 acttcattat cggaaacgtg gcagagaggc tgaatgcagc ggactcgaaa tccgctgagg
    27901 gtgcaaatcc tccgtgggtt cgaatcccgc cgtttccgcc gcaaagcaaa accgcc
//
LOCUS       DAXFZM010000015        27823 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.015, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000015 DAXFZM010000000
VERSION     DAXFZM010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 27823)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27823)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27823
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.015"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            735..998
                     /locus_tag="ACFJAG_000576"
     CDS             735..998
                     /locus_tag="ACFJAG_000576"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979943.1"
                     /translation="MSSAQQANYPQNLFPTKNNPQVCTKGNPPYRHPFKTAIQMILKI
                     KKSYPQKIPHINIIIVLLFKPYILFITLQGNGTAKRKGIFSKN"
     gene            1078..2526
                     /gene="gnd"
                     /locus_tag="ACFJAG_000577"
     CDS             1078..2526
                     /gene="gnd"
                     /locus_tag="ACFJAG_000577"
                     /EC_number="1.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019269816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004616 - phosphogluconate dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="decarboxylating NADP(+)-dependent
                     phosphogluconate dehydrogenase"
                     /protein_id="HFC3979944.1"
                     /translation="MKGDIGVIGLAVMGQNLILNMNDCGFKVVAYNRTIGKVDEFLNG
                     AAKETGIIGAYSLQDLVDKLAKPRKIMMMVRAGSVVDDFVEQLLPLLEEGDIIIDGGN
                     ANYPDTTRRTHYLAGKGILFVGAGVSGGEEGARRGPSIMPGGDKRAWEAVKPIFQAIA
                     AKTPQGEPCCDWVGKDGAGHFVKMVHNGIEYGDMQLICEAYQFMKDGLGLSYDEMHRV
                     FAEWNKTELDSYLIEITAAILGYKDEGGEPLAEKILDTAGQKGTGKWTGINALDLGIP
                     LTLISEAVFARCVSSFKEQRVQTGKLFARTATPVEGGKQEWVEALRQALLASKIISYA
                     QGFMLIREAGESYGWGLDYGNTALLWREGCIIRSAFLGNIRDAYEANPDLVFLGADPY
                     FKNILENCLPAWRKVVAKAVECGIPMPCMASAITFLDGYTTERLPANLLQAQRDYFGA
                     HTYERTDKPRGEFFHTNWTGKGGDTASTTYDI"
     gene            2589..3860
                     /gene="waaA"
                     /locus_tag="ACFJAG_000578"
     CDS             2589..3860
                     /gene="waaA"
                     /locus_tag="ACFJAG_000578"
                     /EC_number="2.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid IV(A) 3-deoxy-D-manno-octulosonic acid
                     transferase"
                     /protein_id="HFC3979945.1"
                     /translation="MFQWLYDVLWLLAPIWIRRYLDKRSGSAPAYRAHRDERFGKPHP
                     NPVTGAVWIHAVSVGETRAAQPLIRELRRRFPDAPLLMTQMTPTGRETAQVLFPDAQC
                     RYLPYDKKTWVRQFLREHRPMFGILMETEIWPNLMKECRRAGVPLFLANARLSEKSLN
                     GYLKVRRLIRPAAASLTGCLAQTEADAARLAKLGAASVQVCGNTKYDLMPSEDMKTLA
                     GQFEKRIGGRPVAVCGSTRVYRGEDEAEKLLAAWQQYRGDALLAVVPRHPEHFQTTFE
                     TAKRFGFKVQRRSDGLPVEPDTQVWVGDSMGELYAYYLCADVAFVGGSLVGSGCQNII
                     EPLSCGVTTIFGFSTYNFSEACRHALASGAAVQVESADAWREAVEKNLSGEGGGMQMQ
                     ARVDGFIAQHRGAGARIAEAVREAVCGHRGR"
     gene            3901..4350
                     /locus_tag="ACFJAG_000579"
     CDS             3901..4350
                     /locus_tag="ACFJAG_000579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopD family copper resistance protein"
                     /protein_id="HFC3979946.1"
                     /translation="MSIYAVAHIIHLYCATAFVGGVFFEVLVLSVLHTGRVSREARRE
                     VEKAMSYRAVRVMPFAVGLLFASGIVMAANRYLPISGEPFATSFGTMLTLKILLAFSV
                     LAHFAIAVVKMARSTLTVGWSKYIHAVVFTHMLLIVFLAKAMFYISW"
     gene            4383..5357
                     /locus_tag="ACFJAG_000580"
     CDS             4383..5357
                     /locus_tag="ACFJAG_000580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HFC3979947.1"
                     /translation="MTEYPGIGSPLFYGVFFAAVLVMIALDMFSLKKNGSHKVGIKET
                     LAWSGLWVAVSCLFAGWLYFELAGNPGYGAAAAKEKVLEFFTGYILEKSLAVDNIFVF
                     LMIFGYFKVAPQFQHRVLLYGVLGALVLRTVMIFVGAALVRQFEWILYLFGAFLLYTG
                     IHMMKPEGDEEEDLANSRLLNAVKKVVPVGTAFHGEKFFTVENGKKIATPLFLVLIMI
                     ELSDVVFAVDSIPAVFAVTTDPFIVLTSNIFAILGLRAMYFLLADVAERFIFLKYGLA
                     FVLGFIGVKMLVMHWVHIPISVSLSVVFGALGASILTSLIYTKKQPDK"
     gene            5426..5501
                     /locus_tag="ACFJAG_000581"
     tRNA            5426..5501
                     /locus_tag="ACFJAG_000581"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5459..5461,aa:Lys,seq:ttt)
     gene            5721..6974
                     /gene="murA"
                     /locus_tag="ACFJAG_000582"
     CDS             5721..6974
                     /gene="murA"
                     /locus_tag="ACFJAG_000582"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008760 - UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0019277 - UDP-N-acetylgalactosamine
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HFC3979948.1"
                     /translation="MDKLKISANGPLNGEITVSGAKNAALPLMCAGLLTSGTLRLKNV
                     PMLADVATTQKLLQGMGARVLTDNISEFEINGGTVNNTCAPYELVRTMRASILVLGPT
                     LARFGEAQVSLPGGCAIGSRPVNQHLKGLEAMGAEIAIEHGYVKAKGKLKGARVAMDV
                     VTVGGTENLLMAATLAEGTTVLENCAIEPEVVDLAECLVKMGAKISGIGTSTMIVEGA
                     GELYGCEHSVVPDRIEAGTFLCAVAITGGRVVLRNAAPKTMEVVLDKLVEAGAVIEAG
                     DDWIAIDMRQRPKAVDIRTVVHPGFPTDMQAQFMALNAVAEGSCRVVETIFENRFMHV
                     PELNRMGANITTEGNTAFVQGVERLSGAVVKATDLRASASLVIAGLAARGETVVERIY
                     HLDRGYENIEKKLGSVGANIERVSG"
     gene            7055..8248
                     /locus_tag="ACFJAG_000583"
     CDS             7055..8248
                     /locus_tag="ACFJAG_000583"
                     /EC_number="2.7.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004618 - phosphoglycerate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HFC3979949.1"
                     /translation="MAFLKLTEQNVRGKTVLIRADMNVPFKGGKISDDTRIRASLASV
                     KYCLDNGASVIVMTHLGRPTEGEFHPEDDVAPVAAHLGGLLGKDVKVLNDWRENKPAL
                     NAGDVVMLQNVRINKGEKKNDLELGKAYAALCDVFVNDAFGAAHRAQASTEAVAQAAP
                     VACAGVLMAGELDALGKALKQPARPMVAIVAGSKVSTKLTILESLADKVDQLIVGGGI
                     ANTFLLAEGKAIGKSLAEHDLVEESKKIMAKMAAKGGSVPLPTDVVVAKAFAADAEAV
                     VKDIADVAEDEMILDIGPKSAAALADLLKAAGTVVWNGPVGVFEFDQFAGGTKALAEA
                     IAQSKAFSIAGGGDTLAAIAKFGVTDQIGYISTGGGAFLEFLEGKELPAVAALEKTRR
                     VNGLI"
     gene            complement(8300..8548)
                     /locus_tag="ACFJAG_000584"
     CDS             complement(8300..8548)
                     /locus_tag="ACFJAG_000584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1990229 - iron-sulfur cluster assembly
                     complex [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family protein"
                     /protein_id="HFC3979950.1"
                     /translation="MLTPEQVKALIAGVAKCEHIEVEGDGHHFFAVIVSSEFEGKARL
                     ARHRLIKDGLKAQLESNELHALSISVAATPAEWAAKAQ"
     gene            complement(8641..9558)
                     /gene="ftsX"
                     /locus_tag="ACFJAG_000585"
     CDS             complement(8641..9558)
                     /gene="ftsX"
                     /locus_tag="ACFJAG_000585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="permease-like cell division protein FtsX"
                     /protein_id="HFC3979951.1"
                     /translation="MSIIHYFSLHVESARSALKQLLRQPFGTLLTLIMLAVAMTLPLF
                     MYLGIQSGQSVLGKLNESPQITVYMETAAAQSDSDTVRSLLTRDKRLDNIRFIGKEDG
                     LAELQSNLDQNLISMLDGNPLPDVFIVTPDPATTPAQMQAIYRDITKLPMVESASMDT
                     EWVQTLYQINEFIRKILWFLSLTLGMAFVLVAHNTIRLQILSRKEEIEITKLLGAPAS
                     FIRRPFLYQAMWQSIFSAAVSLGLCGWLLSAVRPLVDAIFKPYGLNIGWRFFYVGELG
                     LVFGFVIALGVFGAWLATTQHLLCFKAKK"
     gene            complement(9555..10205)
                     /locus_tag="ACFJAG_000586"
     CDS             complement(9555..10205)
                     /locus_tag="ACFJAG_000586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0007049 - cell cycle [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HFC3979952.1"
                     /translation="MIRFEQVSKTYPGGFEALKNVSFQINKGEMIFIAGHSGSGKSTV
                     LKLISGITKPSMGKVLFNGQDLGTLSDNQIGFMRQHIGIVFQDHKILNDRNVLQNVIL
                     PLRIIGYPPRKAEERARIAIEKVGLKGRELDDPVTLSGGEQQRLCIARAVVHQPGLLI
                     ADEPSANLDRAYALDIMELFKTFHEAGTTVIVAAHDETLMADYGHRILRLSKGRLA"
     gene            complement(10400..10882)
                     /locus_tag="ACFJAG_000587"
     CDS             complement(10400..10882)
                     /locus_tag="ACFJAG_000587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HFC3979953.1"
                     /translation="MKRLNLAAIALAATFAAHTASADELAGWKDNTPQNLQSLKAPVR
                     IANLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIW
                     RYTGANSRNFMKSYGNNVGVLPFTVVEAPKCGYRQTITGEVNEKSLTEAVKLAHSKCR
                     "
     gene            11006..11359
                     /gene="arsC"
                     /locus_tag="ACFJAG_000588"
     CDS             11006..11359
                     /gene="arsC"
                     /locus_tag="ACFJAG_000588"
                     /EC_number="1.20.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271974.1"
                     /note="This arsenate reductase requires both glutathione
                     and glutaredoxin to convert arsenate to arsenite, after
                     which the efflux transporter formed by ArsA and ArsB can
                     extrude the arsenite from the cell, providing resistance;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0008794 - arsenate reductase
                     (glutaredoxin) activity [Evidence IEA];
                     GO_process: GO:0046685 - response to arsenic-containing
                     substance [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase (glutaredoxin)"
                     /protein_id="HFC3979954.1"
                     /translation="MSEIKIFHNPRCSKSRAAVSLLEERGIAAEAVKYLDTPPDLSEL
                     KDIFNKLGLASARGMMRVKDDLYKELGLDNPDLDNDALLRAIADHPALLERPIVLANG
                     KAAVGRPLENIEAVL"
     gene            11356..12012
                     /locus_tag="ACFJAG_000589"
     CDS             11356..12012
                     /locus_tag="ACFJAG_000589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HFC3979955.1"
                     /translation="MNKRLFCSRNGLRYYLLGGFCLSVFPLLLVFASSVWAVYRTGGQ
                     VLPPYVRADAALVLGAAAWDKRPSPVFRERINHAIALYQSRRVGKIVFTGGRTKKGYM
                     TEAEVGRRYALKQGVPARNILFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLA
                     RAAEMAEDLGVRVYMSATPTTRFDAGNKKKIFMLQEGYALSLYRLEKWGSRFLGWLSD
                     "
     gene            12128..13522
                     /gene="gltX"
                     /locus_tag="ACFJAG_000590"
     CDS             12128..13522
                     /gene="gltX"
                     /locus_tag="ACFJAG_000590"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004818 - glutamate-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HFC3979956.1"
                     /translation="MTVKTRFAPSPTGYLHIGGVRTALFSWAFARHHKGEFLLRIEDT
                     DLARSTAESVNIILEGMKWVGLDYDNADNVVYQTRRFDRYKEVIAELLAKGDAYYCYC
                     SKEELEAMREKAEKEGTATYDRRWRPEAGKTLPEIPAGVQPVVRFKTPLDGVTKWTDL
                     VKGEISIPNEALDDLIIARADGTPTYNFCAVVDDYDMGVTHIIRGDDHVNNTPKQINI
                     LKAIGANLPEYGHLPMILNEQGKKISKRSGDTVAITDFGAMGILPEAMLNYLARLGWA
                     HGDDEFFTTEQFIEWFDLKDVSPSPSRMDLKKLYWINGEHIKITPDGKLTELVKPRLA
                     LRDIHETEKPALEDVLALVKDRAQDLNALADECLYFYKKQVPAEADVAKHWDDEAAAR
                     MLRFAERLEGLEDWNAKAIHDLFKPFCDEEGIKMGKLGMPLRLAVCGTAKTPSVDAVL
                     ALISKEEVLKRIRA"
     gene            13543..13938
                     /locus_tag="ACFJAG_000591"
     CDS             13543..13938
                     /locus_tag="ACFJAG_000591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979957.1"
                     /translation="MPSDVGMRLQTAFRRKLNMKKILYFLMFVFSTSVWAGGAEDNLL
                     SIQSGYRALLQKQNNLDGKIIGMQSDLEDARRRLQAAQADIARLEAEIPAAMAQKARQ
                     AEEMRQIGVRLDHAWNAVYGAGERKRRGN"
     gene            13942..14433
                     /locus_tag="ACFJAG_000592"
     CDS             13942..14433
                     /locus_tag="ACFJAG_000592"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HFC3979958.1"
                     /translation="MNSLFVDNTVFITRLKAGHIGRLVQALFEEWHGFEPWSSVDKIR
                     AYYGRCLKDDELPLAFAAVDDSGTLLGSAAVKRHDMENFPQYEYWLGDVFVLPEYRGK
                     GIGRRLVAHCIGAARSLGIKFLYLYTPDVQIFYESFGWAVVGRHFHNGEWVTVMRLDV
                     DKV"
     gene            complement(14709..17303)
                     /gene="mutS"
                     /locus_tag="ACFJAG_000593"
     CDS             complement(14709..17303)
                     /gene="mutS"
                     /locus_tag="ACFJAG_000593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0030983 - mismatched DNA binding [Evidence
                     IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HFC3979959.1"
                     /translation="MSKSAVSPMMQQYLGIKAQHTDKLVFYRMGDFYELFLDDAVEAA
                     KLLDITLTTRGQMDGVPIKMAGVPFHAAEQYLARLVKLGKSVAICEQVGEVGAGKGPV
                     ERKVVRIVTPGTLTDSALLEDKETNRIVAVSPDKKYIGLAWASLQSGEFKTKLTTADK
                     LNDELARLQAAEILLPDSKNAPQLQTASGVTRLNAWQFAADAGEKLLTEYFGCQDLRG
                     FGLDSKEHAVSIGAAGALLNYIRLTQNLMPQHLDGLSLETDSQYIGMDAATRRNLEIT
                     QTLSGKKTPTLFSILDGCATHMGSRLLALWLHHPLRNRAHIRARQEAVTALESQYEPL
                     QCHLKSIADIERIAARIAVGNARPRDLASLRDSLFELAQIDLSATGSSLLETLKAVFP
                     ETLPVAETLKAAVMPEPSVWLKDGNVINHGFHPELDELRRIQNHGDEFLLDLEAKERE
                     RTGLSTLKVEFNRVHGFYIELSKTQAEQAPADYQRRQTLKNAERFITPELKAFEDKVL
                     TAQDQALALEKQLFDGVLKNLRTALPQLQKAAKAAAALDVLSTFSALAKERNFVRPEF
                     ADYPVVHIENGRHPVVEQQVRHFTANHTDLDHKHRLMLLTGPNMGGKSTYMRQVALIV
                     LLAHTGCFVPADAATIGPVDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSI
                     VLMDEVGRGTSTFDGLALAHAIAEHLLQKNKSFSLFATHYFELTYLPEAHAAAVNMHL
                     SALEQGRDIVFLHQIQPGPAGKSYGIAVAKLAGLPVRALKAAQKHLNGLENQAAANRP
                     QLDIFSTMPSEKGDEPNVDCFVDKAEEKHFEGILAAALENLDPDSLTPREALSELYRL
                     KDLCKSVS"
     gene            17733..18737
                     /gene="gap"
                     /locus_tag="ACFJAG_000594"
     CDS             17733..18737
                     /gene="gap"
                     /locus_tag="ACFJAG_000594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003766473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0006006 - glucose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HFC3979960.1"
                     /translation="MSIKVAINGFGRIGRLALRQIEKAHGIEVAAVNDLTPAEMLLHL
                     FKYDSTQGRFQGTAELKDDAIVVNGREIKVFANPNPEELPWGELGVDVVLECTGFFTN
                     KTKAEAHIRAGARKVVISAPGGNDVKTVVYGVNQDILDGSETVISAASCTTNCLAPMA
                     AVLQKEFGVVEGLMTTIHAYTGDQNTLDAPHRKGDLRRARAAALNIVPNSTGAAKAIG
                     LVIPELNGKLDGSAQRVPVATGSLTELVSVLERPATKEEINAAMKAASSESYGYNEDQ
                     IVSSDVVGIEYGSLFDATQTRVMTVGGKQLVKTVAWYDNEMSYTCQLVRTLEYFAGKI
                     "
     gene            complement(18889..19569)
                     /gene="tsaA"
                     /locus_tag="ACFJAG_000595"
     CDS             complement(18889..19569)
                     /gene="tsaA"
                     /locus_tag="ACFJAG_000595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase
                     TrmO"
                     /protein_id="HFC3979961.1"
                     /translation="MTYTITPIGTARSPYKQKFGIARQPGLVSAAEACIELNPEFTAD
                     SVRGLEDFDYVWISFIFHGVLDEGWAQMVRPPRLGGKQKMGVFATRSPHRPNHLGLSL
                     LKLERIETGKPVRLYCSGSDLLDGTPIVDIKPYIPFIESKPDAASGFVSGKPVELEVV
                     WQENIGAENLSANTKNLISQSIAQDPRPAYQNIPERIYVMNIADYEVRFQIEENRATV
                     INLSPTPL"
     gene            20029..20664
                     /locus_tag="ACFJAG_000596"
     CDS             20029..20664
                     /locus_tag="ACFJAG_000596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamidase"
                     /protein_id="HFC3979962.1"
                     /translation="MIVSIDVDAQKTFTPLCPDELPVNEGHLIVEELNAQAALADLRV
                     MTKDAHHMAAKWLVDNPVDMLKPTGLSDADLTWVAHAMVGTCGYELLDGLPSAKEYDY
                     CVWKGVDPELHPYGACFHDIEEKLSTGLIEWLRCQNTNMVIVGGLATDYCVKTTVLQL
                     LKGGRWQVIVNEAACRGIAPDTIEAAWQEMRSSGAIILKNAEKIKKYINNQ"
     gene            20701..21669
                     /gene="waaC"
                     /locus_tag="ACFJAG_000597"
     CDS             20701..21669
                     /gene="waaC"
                     /locus_tag="ACFJAG_000597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008920 - lipopolysaccharide
                     heptosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase I"
                     /protein_id="HFC3979963.1"
                     /translation="MKILLVRLSSMGDLIHTLPAIEDLARQCSDVELHWLCEAGFAGI
                     ARLHPFVKKVHVMKWRQWRKHLFQAETWREMGRLKQALLQEAFDFVLDSQGLIKSACF
                     AKMAKSPIYGLDKHSAREGVAALAYDKKYVVPKGRNAVWRNRDLFAQVFGYAMPETQV
                     FGLSVPEASRLKNLAQPYYAALHATSRDSKLWPMENWRELLQKLNQKQQCNVYLPWGN
                     EAEKVRAEQIADGLPFTIVCAKMNLLQAAYLLKHAVGIVGVDTGLLHLANALEKPVVG
                     IYTDTDPIKTGVQVSAIAKNVGNIGQIPTADLVYQTLMDCVSADKG"
     gene            21895..22644
                     /locus_tag="ACFJAG_000598"
     CDS             21895..22644
                     /locus_tag="ACFJAG_000598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HFC3979964.1"
                     /translation="MKALVAVKRVVDYNVKVRVKADGSDVDIGNVKMSMNPFDEIAVE
                     EAVRLKEAGKVSEIVAVSLGEKKCEETLRTALAMGADRAIHIETDVKLEPLAVAKLLK
                     AVADKENPQIFFLGKQAIDDDANQVAQMLAALLNAAQGTFVSKVQIEGDEVQIVREID
                     GGEETIALKLPAVISADLRLNEPRFVKLPNIMAAKKKPLEKLDSADLATDISPRLKTV
                     KFAEPKARQAGVKVASVAELVEKLKNEAKVI"
     gene            22655..23590
                     /locus_tag="ACFJAG_000599"
     CDS             22655..23590
                     /locus_tag="ACFJAG_000599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HFC3979965.1"
                     /translation="MSVLIIAEHDNKQLNPATLHAVAAAAKLGKVDLLVVGNGASSVV
                     EFAKQVAGVEKVLVADAAHYAEGLAEELAPLVVKLAADYRYVAATATTFGKNLLPRVA
                     ALLDVPQISDLTEIVDNTTFVRPIYAGNAFETVQADSEKLVLTFRVTAFDAVAAQGGN
                     AEVINVKTTPAQNLSRFVNRQLSHSDRPELTQAKVIVSGGRALGSVEKFSEVLTPLAD
                     VLGAAIGASRAAVDAEYAPNDAQVGQTGKVVAPQLYFAIGISGAIQHVAGMQDSKVIV
                     AINKDADAPIFNVADYGLVGDLFEIVPQLIELLKN"
     gene            23653..24264
                     /locus_tag="ACFJAG_000600"
     CDS             23653..24264
                     /locus_tag="ACFJAG_000600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YigZ family protein"
                     /protein_id="HFC3979966.1"
                     /translation="MITTYKTITSPTQAEFKDKGSRFIAFAYPIRTLADVKKYLNLLK
                     EEHYKARHWCYAYRLGVNGMQFRGNDDGEPPGSAGRPILGQIDSVGITDVLVVVVRYF
                     GGALLGVPGLIHAYKEATAQALAIAEVVEKNIEKTVWLKCEYPFLNEAICIAKQYQAD
                     ILEQDLQLDCRLTVSLSLANYEACVAAWKNTRQVEVNTEKPFE"
     gene            complement(24316..24654)
                     /locus_tag="ACFJAG_000601"
     CDS             complement(24316..24654)
                     /locus_tag="ACFJAG_000601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4298 domain-containing protein"
                     /protein_id="HFC3979967.1"
                     /translation="MKKEQANTQKRIDEIQSKYREWCHLLLQLEENIRRWKYAVALIR
                     DMDNFYTHEYQVRHQTIKDGVELNLQTEGEYSIMSEDALWNAPGEFHQLAWLYLCSSV
                     DTLDRYTQEN"
     gene            24791..26062
                     /gene="purD"
                     /locus_tag="ACFJAG_000602"
     CDS             24791..26062
                     /gene="purD"
                     /locus_tag="ACFJAG_000602"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004637 - phosphoribosylamine-glycine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009113 - purine nucleobase biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HFC3979968.1"
                     /translation="MKLLVIGNGGREHALAWKLAQSPKVETVFVAPGNAGTAIESKLQ
                     NIALTAYQDLIEFCRKENIVFTVVGPEAPLAAGIVDDFRAAGLKIFGPTQYAAQLESS
                     KDFAKAFMVKYNIPTAQYQTFENADAAHDYVNQKGAPIVIKADGLVAGKGVIVAMTLD
                     EAHAAIDDMLLGNKMGNAGERVVIEDFLQGEEASFIVMVDGNHVLPMATSRDHKRLLD
                     GDKGPNTGGMGAYSPAPVVTPAVYERAMNEIILPTVAGMKAEGHEFTGFLYAGLMIDQ
                     SGAPYTIEFNCRFGDPETQPIMSRLNSDLADLVEAAIDGRLDSVKAEWNPQTAVGVVL
                     AAQNYPETPKKGDVISGLDDVNRIGKVFHAGTTVNEKGDVLTNGGRILCVVGLGDDVA
                     QAKAKAYGALEKISFDGMQYRKDIADKAINR"
     gene            26096..26698
                     /locus_tag="ACFJAG_000603"
     CDS             26096..26698
                     /locus_tag="ACFJAG_000603"
                     /EC_number="2.7.7.87"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0003725 - double-stranded RNA binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0061710 - L-threonylcarbamoyladenylate
                     synthase [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HFC3979969.1"
                     /translation="MTDALQTAFYIMLFSRIIAASAQRKLSVYLKKGGLVAYPTESCY
                     GLGCLPTLAKALGKLAHLKKRPQHKGMIVIGNQLEQLQPLLQMPFENIQTMLRNEWPA
                     PKTFLLLAKSGVLPALRGKRRSKLAVRVPDHTGARRLCQALGMPLVSTSCNRAGKRAC
                     RTEREVRRQFGRDVWIVGGRIGRQKSPSQIIDGETGKRLR"
     gene            26713..27228
                     /locus_tag="ACFJAG_000604"
     CDS             26713..27228
                     /locus_tag="ACFJAG_000604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979970.1"
                     /translation="MKTFLHTQRKNFLDGISLHDCYRTAIKVEGRNVCFDFEDGFVVL
                     DNNPNNQAGKHLKTDFSRVVLTHENRNAEDDYLVDIFEDIVFLGKRLFTVRKFLDFSE
                     LLEMINAQGYFLEFLYLYECIGVKTSDYFLEAVLVTGRSRECKKCFIKIMRASSFVYQ
                     WNNLRLNSEIV"
     gene            complement(27380..27820)
                     /locus_tag="ACFJAG_000605"
     CDS             complement(27380..27820)
                     /locus_tag="ACFJAG_000605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="surface-adhesin E family protein"
                     /protein_id="HFC3979971.1"
                     /translation="MIKETLMRPIFLSFVLLPILITACSTPDKSARWENIGTISNGNI
                     HTYINKDSVRKNGNLMIFQDKKVVTNLKQERFANTPAYKTAIAEWEIHCNNKTYRLSS
                     LQLFDTKNTEISTQNYTASSLRPMSILSGTLTEKQYETVCGKKL"
BASE COUNT         6664 a         6380 c         7864 g         6915 t
ORIGIN      
        1 ataaagcgcg gtatggcgga aaacctgcct tttcaaagtt ttattcatat tttattcctt
       61 aagtttgcct tcgcgggacg gcgcgccgcg aacgccgggg ttcggtaaac cgcccgattc
      121 cgcgcccgcc ggattgctga ttgaaaagct tacctcccca ttttaacttt gcgcacttat
      181 cacggtaaag cgttttttag caaaccgccg cagatgcccg accggtccgg attcccgcct
      241 gcgcgggaat gacggcatcg gtttgacggt atttaattga attgcggaaa ttgacggatt
      301 cagtgagatt ggcgggatga agcctaccct gtagcccgcc ttttatagcg gattaacaaa
      361 aaccggtacg ggttgccccg ccccggctca aagggaacgg ttccctaagg cgcccaagca
      421 ccgggcggat cggttccgta ccattcgtac tgcctgcggc ccgccgcctt gtcctgattt
      481 tcgttaatcc gctatgctta tacacaacca gccaaaagcc atcttattga aatatcataa
      541 gatttactca aaaatcttat tttctccacc acttatgcac aaactcggat acacactctg
      601 ccaatatgca gaaaaaaaga cattcgcgcc gacacctttt catccccaca agttccaaac
      661 acatttccgg cttaaatatc cacagcattc ccgttcttaa aggcaccggc agccattcgg
      721 taaagaaaag cgggatgtcg tccgcacaac aagcaaacta tccacaaaac ctattcccca
      781 cgaaaaacaa tccacaggta tgcacaaaag ggaatcctcc ttaccgacac ccttttaaaa
      841 cggcaattca gatgatttta aaaataaaaa aaagttaccc acagaaaatt ccccatatca
      901 atataatcat cgttttatta tttaaacctt atattttatt tataaccctt cagggaaacg
      961 gcacggcaaa gcgtaaaggc atcttttcaa aaaattaaaa agttaaggat tgttaaacaa
     1021 gtgtaaatca ggtagagttg cagccgataa attaaatcta taacggagct tcctgcaatg
     1081 aaaggcgata ttggcgtaat cggtttggcg gttatggggc aaaacctgat tttgaatatg
     1141 aacgattgcg gatttaaggt tgtcgcctac aaccggacaa tcggtaaagt ggacgaattt
     1201 ttaaacggtg cggcaaaaga gacgggcatt atcggcgcgt attccctgca agacttggtc
     1261 gataagctgg caaaaccgag aaaaatcatg atgatggttc gcgcaggttc ggtggttgac
     1321 gactttgtcg aacaactgct tccgctgttg gaagaaggcg acatcattat cgacggcggc
     1381 aatgccaatt accccgacac gacacggcgg acacattacc ttgccggaaa agggattttg
     1441 tttgtcggcg cgggcgtatc cggcggcgaa gaaggcgcgc ggcgcgggcc gtccatcatg
     1501 ccgggcgggg ataagcgcgc ttgggaagcg gtcaagccga ttttccaggc gattgccgcc
     1561 aaaacgccgc agggcgaacc gtgttgcgac tgggtcggca aggatggcgc gggacatttt
     1621 gtcaaaatgg tgcacaacgg catcgaatac ggcgatatgc agctgatttg cgaagcgtac
     1681 cagtttatga aagacggttt ggggctgtcc tacgacgaaa tgcaccgcgt gtttgccgag
     1741 tggaacaaaa ccgagctgga ttcttatctg attgaaatca cagcggcaat tttgggctat
     1801 aaggacgaag gcggcgaacc gctggccgag aaaatcctcg atacggcagg gcaaaaaggc
     1861 acgggcaaat ggacgggcat caatgccttg gatttgggca ttccgctgac gctgatttcc
     1921 gaagccgtat tcgcccgctg tgtttcgtcg ttcaaagaac agcgcgtgca gaccggcaag
     1981 ctgttcgccc gaacagccac gcccgtcgaa ggcggcaaac aagaatgggt cgaggcgttg
     2041 agacaggctt tgcttgcctc caaaatcatt tcctacgcac aaggctttat gttgatccgc
     2101 gaagcgggcg aaagttacgg ctggggtttg gactacggca acactgcgct gctgtggcgc
     2161 gaaggctgca tcatccgcag cgcgtttttg ggcaatatcc gcgacgcgta tgaggccaat
     2221 cccgatttgg tgttcttggg tgcggatccg tatttcaaaa atattttgga aaactgcctg
     2281 ccggcatggc gcaaggtggt tgccaaggcg gtcgaatgcg gcatccctat gccctgcatg
     2341 gcttcggcga ttacgttctt ggacggctat acgaccgaac gcctgcctgc caacctcttg
     2401 caggcacagc gcgactactt cggcgcgcac acttacgagc gcaccgacaa accgcgcggc
     2461 gaatttttcc ataccaactg gacgggcaag ggcggagata ccgcttcgac aacctacgat
     2521 atttgattcc gttgccgaaa tgccgtccga accgttcgga cggcatttgt tttgcaggaa
     2581 atagaaagat gttccaatgg ctttatgatg tattgtggct gcttgcgccg atatggatac
     2641 ggcgttattt ggacaaacgc tccggaagtg ccccggcata ccgggcgcat agggacgagc
     2701 gtttcggcaa gccgcatccg aatcccgtta ccggcgcggt ttggatacac gccgtttcgg
     2761 tcggagaaac gcgtgccgcc cagcccttga tacgcgagtt gcggcggcgt tttcccgatg
     2821 cgccgctgct gatgacgcag atgaccccga cgggacggga aaccgcgcaa gttctgtttc
     2881 ccgatgcgca atgccgctat cttccgtatg acaaaaaaac gtgggtacgg cagtttttgc
     2941 gcgaacaccg cccgatgttc ggcattttga tggaaaccga aatctggccc aatctgatga
     3001 aggaatgccg gcgagcgggt gtgccgctgt ttttggcgaa tgcgcggctg tcggaaaaat
     3061 cgctgaacgg ttatctgaaa gtccgccgcc tgatccgtcc cgcagccgct tcgctgacgg
     3121 gctgtctggc gcagacggag gcggatgcgg cgcggttggc gaaattgggc gcggcatccg
     3181 tgcaggtgtg cggcaatacc aaatacgacc tgatgccgtc tgaagacatg aaaacgctgg
     3241 cggggcagtt tgaaaaacgc atcggaggcc ggccggttgc cgtgtgcggc agcacgcgcg
     3301 tttatcgggg cgaagacgag gcggaaaaac tgctggcggc gtggcaacaa tatcgcggcg
     3361 atgccctgct ggccgtcgtg ccgcgccatc ccgagcattt tcagacgaca tttgaaacgg
     3421 cgaaacgctt cgggtttaag gttcagcggc gcagcgacgg tttgccggtc gaacccgata
     3481 cgcaggtgtg ggtaggcgac agtatgggcg agctgtatgc gtattacctg tgcgccgatg
     3541 tcgcttttgt cggcggcagt ctggtcggtt cgggctgtca gaacatcatc gaaccgcttt
     3601 cctgcggcgt tacgacgata ttcggctttt cgacctacaa tttttccgaa gcctgccggc
     3661 acgccttggc atcgggtgcg gcggttcaag tcgaatcggc ggacgcgtgg cgtgaagccg
     3721 ttgaaaaaaa cttatctggc gaggggggcg gaatgcagat gcaggcgcgc gtggacggct
     3781 ttatcgcaca acatcgcgga gcgggcgcga gaatcgccga ggcggtgcgg gaagcggtat
     3841 gcggacatcg ggggcgatag tgatacaatc cgtatccgag ttttccggtt ggagcatcgt
     3901 atgagtattt atgccgtcgc gcacatcatc cacctgtatt gcgccaccgc ctttgtcggc
     3961 ggcgtgtttt ttgaagtgct ggttttgtcc gtcctgcata cgggacgggt gtcgcgcgag
     4021 gcgcggcgcg aagtggaaaa ggcaatgtct taccgcgccg tcagggtgat gccgtttgcg
     4081 gtcggactgc tgttcgccag cggcatcgtg atggcggcaa accgctacct tcctatatcg
     4141 ggcgaaccgt ttgccacttc cttcggtacg atgctgacgc tgaaaatcct gttggcgttc
     4201 agcgtgttgg cgcacttcgc catcgccgtc gtcaaaatgg cgcgttccac gctgacggtc
     4261 ggctggtcga aatacataca cgccgtcgtc tttacccata tgctgctgat tgtctttttg
     4321 gcaaaagcga tgttttatat cagctggtaa cacaactaca tttcaaatca ggagattgaa
     4381 ccatgacaga atatcccggc atcgggtcgc cgttgtttta cggcgttttt tttgcggcag
     4441 tgctggtcat gattgccttg gatatgtttt cgctgaagaa aaacggcagc cataaagtcg
     4501 gcatcaaaga aaccttggca tggagcggct tgtgggttgc cgtatcctgc ctgttcgcag
     4561 gctggctgta tttcgaactc gccggcaatc ccggctacgg cgcggcagcc gcaaaagaaa
     4621 aagtattgga attctttacc ggctacattt tggaaaaatc gttggcagtc gacaatattt
     4681 tcgtgttcct gatgatattc ggctacttca aagtcgcacc gcagtttcaa caccgcgtgc
     4741 tgctgtacgg cgtattgggc gcattggtat tgcgcaccgt catgattttc gtcggcgcgg
     4801 cactggttcg gcagttcgag tggattctgt atctgttcgg cgcgttcctg ctctataccg
     4861 gcatacacat gatgaagccc gaaggagatg aggaagagga tttggcaaac agcaggctgc
     4921 tgaatgccgt caagaaagtc gttccggtcg gcacggcgtt tcacggcgag aaatttttta
     4981 ccgtcgagaa tggcaaaaaa atcgccacgc cgctgttttt ggtgctgatt atgattgaat
     5041 tgagcgatgt cgtttttgcc gtggacagta tccccgccgt ctttgccgtt accaccgatc
     5101 cgtttatcgt gctgacttcc aatattttcg ctattttggg tttgcgggcg atgtatttcc
     5161 tgctggcgga tgtggcggaa cgctttatct tcctgaaata cggcttggca ttcgtgttgg
     5221 gttttatcgg tgtgaaaatg ctggtgatgc attgggtaca catcccgatt tccgtttcgc
     5281 tgtcggtcgt gttcggcgcg ttgggtgcat cgatactgac ctcgttaatt tatacgaaaa
     5341 aacagcctga taaataaaac gccgtctgaa cgccgacaaa atggttgaca gcatcaggct
     5401 tgatgtatag aatttcaaag ttttcgggtc gttagctcag tcggtagagc agcggacttt
     5461 taatccgttg gtcgagcgtt cgaatcgctc acgacccacc aggtaaagca aaaaagctga
     5521 gttttcaaaa ctcggctttt tttgttttcc gacaatcctt gttcggaaag cgcggcattt
     5581 cgtcaaattc tttggtgcgg cttccgtatt tttcccgaaa atcccttata attccgcctc
     5641 tgcaaccttc atcgggtgat gctttatgca ttgtcccgag tattgaaata ttagcaagta
     5701 cccaccagga aagaacaaac gtggacaaac tgaaaatctc cgcaaacggc ccgctcaacg
     5761 gggaaataac ggtctcgggc gcgaaaaacg cggcattgcc gctgatgtgc gcgggtttgc
     5821 tgacatcggg tacgttgcgc ctgaaaaacg tccctatgct ggcagatgtc gcaaccacgc
     5881 aaaagctgct tcagggcatg ggcgcgcgcg ttctgaccga caatatcagc gaatttgaaa
     5941 tcaacggcgg tacggtcaac aatacctgcg ccccttacga attggttcgg acgatgcgcg
     6001 cttcgatttt ggtgcttggc ccgacgctgg cgcgtttcgg cgaggcgcaa gtcagcctgc
     6061 cgggcggctg cgccatcggt tcgcgccccg tcaatcagca tttgaaaggc ttggaagcga
     6121 tgggggcgga aatcgccatc gaacacggtt acgtcaaagc caaaggcaaa ctcaaaggtg
     6181 cgcgcgtggc gatggatgtc gttaccgtcg gcggtacgga aaacctgctg atggcggcga
     6241 cgctggcgga aggtacgacg gttttggaaa actgcgccat cgagcctgaa gtggtcgatt
     6301 tggcggaatg cctggtcaaa atgggcgcga aaatcagcgg catcggaaca tcgaccatga
     6361 ttgtggaagg tgcgggcgag ctgtacggct gcgaacacag cgtcgtcccc gaccggattg
     6421 aagcggggac gttcctgtgt gcggtggcga taaccggcgg cagggtggtt ttgcggaatg
     6481 ccgccccgaa aacgatggaa gtggtgttgg acaaactggt cgaggcaggt gcggtgattg
     6541 aagcgggcga cgattggatc gccatcgata tgcggcagcg tccgaaggcg gtggacatcc
     6601 gcacggtcgt ccatcccggc ttccccacgg atatgcaggc gcagtttatg gcattgaatg
     6661 ccgtggcaga gggaagctgc cgcgtggtgg aaacgatttt tgaaaaccgc tttatgcacg
     6721 ttccggagtt gaaccggatg ggggcgaaca ttacaaccga gggcaatacg gcatttgtgc
     6781 agggtgtgga acggctttcc ggcgcggtcg tcaaggcgac ggatttgcgc gcgtccgcca
     6841 gcctagttat cgccggtttg gcggcgcgcg gcgaaaccgt ggtcgaacgg atttaccact
     6901 tggatcgcgg ttatgaaaat attgaaaaaa aactcggcag cgtcggtgcg aacatcgagc
     6961 gcgtatccgg ctgatcgggt tgctatgccg tctgaaggct tcaggcggca tcaattgttt
     7021 ctgtatcgca aacactgatt gaaaaggact gattatggca tttttaaaac tgaccgaaca
     7081 aaacgtgcgg ggcaaaaccg tcctcatccg cgccgatatg aacgtgccgt tcaaaggcgg
     7141 caaaatcagc gacgacaccc gtatccgcgc ctcgctcgcg tccgtcaaat actgcttgga
     7201 caacggcgcg tccgttattg tgatgaccca cttgggccgc ccgaccgaag gcgagttcca
     7261 ccccgaagac gacgttgcgc ccgttgccgc gcacttgggc ggcctgttgg gcaaagacgt
     7321 gaaagtattg aacgactggc gcgaaaacaa accggctttg aacgcgggcg atgtcgtgat
     7381 gctgcaaaac gtgcgtatca acaaaggcga gaagaaaaac gatttagaac tgggcaaagc
     7441 ctacgccgcc ttgtgcgacg tgttcgtcaa tgatgcgttc ggcgccgcac accgcgccca
     7501 agcttcgacc gaagccgttg cccaagccgc gcccgtcgcc tgcgccggcg tattgatggc
     7561 gggcgaactc gacgctttgg gcaaagccct gaaacagccc gcgcgtccga tggtggcgat
     7621 tgttgccggc agcaaagtgt ccaccaagct gaccatcctc gaatcgttgg cggacaaagt
     7681 cgatcagctt atcgtcggcg gcggcatcgc caacacattc ctgttggcag aaggcaaagc
     7741 catcggtaaa tcgctggcgg agcacgattt ggtggaagaa tccaaaaaaa ttatggcgaa
     7801 aatggcggcc aaaggcggtt ctgtgccgct gccgaccgat gtcgtcgttg ccaaagcctt
     7861 tgccgccgat gccgaagcgg tggtaaaaga catcgccgac gttgccgaag acgagatgat
     7921 tttggacatc ggcccgaaat ccgccgccgc gcttgccgat ttgcttaaag ccgccggtac
     7981 ggtcgtttgg aacgggccgg tcggcgtgtt cgagttcgat caattcgcag gcggcacgaa
     8041 agcccttgcc gaagccatcg cccaaagcaa agcgttctcg attgcgggcg gcggcgacac
     8101 gctggcggcg attgccaaat tcggcgttac cgaccaaatc ggctacatct ccaccggagg
     8161 cggcgcgttc cttgagttct tggaaggcaa agagctgcct gccgtagccg ctttggaaaa
     8221 aacgcggcga gtaaacggtt tgatataaaa aaatgccgtc tgaaacgaaa tggtttcaga
     8281 cggcattttt gtgtggcggt tattgtgctt tggcagccca ttccgccgga gtggcggcaa
     8341 ccgaaatgga aagtgcgtgc agttcgttgc tttccagttg ggctttgagt ccgtctttaa
     8401 tcaggcggtg gcgcgcgagg cgtgccttgc cttcaaattc tgatgaaacg atgacggcga
     8461 aaaaatggtg tccgtcgcct tctacttcga tgtgttcgca ttttgccacg cctgcaatca
     8521 gggccttgac ttgttcgggt gtcagcatag tggggagtcc ttattgggga aatgcgccat
     8581 tatactggca aatcgaaatt ccgtctgaaa acggcttcag acggaatttt tgacggtgtt
     8641 ttattttttg gctttgaagc agagcaggtg ttgtgtggtg gcaagccacg cgccgaatac
     8701 gcccaacgcg atgacgaagc cgaacaccag cccgagttcg ccgacgtaga agaaacgcca
     8761 gccgatgttc aagccgtagg gtttgaagat ggcatcgacc aaggggcgca cggcagagag
     8821 cagccaaccg caaagcccta agctgacggc ggcggagaag atactctgcc acatagcctg
     8881 ataaaggaag gggcggcgga taaacgacgc gggcgcaccc aggagtttgg tgatttcgat
     8941 ttcttctttg cggctgagga tttgcagtcg gatggtgttg tgtgcgacaa ggacgaaagc
     9001 catacccagc gtcagggaaa gaaaccataa gattttgcgg atgaactcgt tgatttggta
     9061 cagcgtttgc acccattcgg tatccataga cgcggattcg accataggca gcttggtaat
     9121 gtcccggtag attgcctgca tttgggcggg cgtggttgcc gggtcggggg taacgataaa
     9181 gacatccggc agggggttgc cgtcaagcat ggaaatcaga ttttggtcga ggttggactg
     9241 taattccgcc aaaccgtctt ccttgccgat gaagcggatg ttgtcgagcc gtttatcgcg
     9301 cgtcagcagg ctgcgtacgg tatcgctgtc gctttgtgcg gcggcggttt ccatatagac
     9361 ggtgatttgc ggcgactcgt tgagtttgcc caacacgctt tgcccgcttt ggatgcccag
     9421 atacataaac agcggcaggg tcatcgcgac ggcaagcatt atgagggtaa gcagtgtgcc
     9481 gaagggttgg cgcagaagct gtttgagtgc ggagcgcgcg gattcgacgt gcagcgagaa
     9541 gtagtggatg atgctcatgc gagtcgtcct ttcgagaggc gcaggatgcg gtgtccgtag
     9601 tccgccatca gggtttcgtc atgtgcggcg acgatgacgg tggttcccgc ttcgtggaag
     9661 gttttgaaca attccataat atcgagcgcg taggcacggt cgaggttggc ggagggttcg
     9721 tcggcaatca gcaggccggg ctggtggacg acggcgcggg cgatgcacag gcgttgttgt
     9781 tcaccgcccg agagggttac gggatcgtcc aattctcgtc ctttcaagcc gactttttcg
     9841 atggcgatgc gggcgcgttc ttcggctttg cgcggcggat agccgataat ccgcaggggc
     9901 aggatgacgt tttgcaggac attgcggtcg ttgaggattt tgtggtcttg gaacacgatg
     9961 ccgatgtgtt ggcgcataaa gccgatttgg ttgtcggaca atgtgccgag gtcctgcccg
    10021 ttaaacagga ctttgcccat gctcggcttg gtgatgcccg aaatcagctt gaggacggtg
    10081 gatttgcccg aaccggagtg tcccgcgata aaaatcatct cgcctttgtt gatttggaag
    10141 ctgacgtttt tcagggcttc aaaaccgccg ggataggttt tggaaacttg ttcgaaacgg
    10201 atcataggag gtcctgtaag gaagggcggc atatcgtttc gggcggttgc gtccgcaggg
    10261 atatgccgtc tgaacaatag gtaagacagt accgattata aagattccgc ctgtttttag
    10321 atagtggata agtttggcgg ataccgaagg ccgggcggga aaaatgccgt ctgaagcggc
    10381 ttcagacggc atccggcgtt taacggcatt ttgaatgggc gagtttgacg gcttcggtca
    10441 ggcttttctc gttcacctct cctgtaatgg tctgcctgta tccgcatttc ggggcttcga
    10501 cgacggtaaa gggcagtacg ccgacattgt ttccgtagga tttcataaag tttcggctgt
    10561 tcgccccggt gtaacgccaa atcgggtagc tgaccggggt ctgcttgaga aagttgccga
    10621 tattgtcgga tgtgtcgagc gcgatgccga ccatatcgac gctgcctttt ttctgcgctt
    10681 tgtaccattt ggacatggcg ggcatctctt ttcgacacgg accgcaccaa gtcgcccata
    10741 ggttggcgat gcggacgggg gctttgagcg attgcaggtt ttgcggggta ttgtctttcc
    10801 atccggccag ttcgtctgcc gaggcggtat gtgcggcaaa tgtggcggca agggcgattg
    10861 cggcgagatt caagcgtttc atcgttttgt cctttgtatg tcgattcggg tattgtaaac
    10921 cgtttggtac ggttggaggc ggggtattga gtaaaaccct gcgtaagccg ataataaggg
    10981 gattgtcgag aagtagggaa atgtcatgtc tgaaatcaaa attttccaca atccgcgttg
    11041 cagcaaatcg cgtgccgccg tgtccctatt ggaagaacgc ggcattgctg ccgaagcggt
    11101 caaatatttg gatacgccgc ccgacttgtc cgaattgaag gatattttca acaaattggg
    11161 cttggcatcg gcgcgcggga tgatgcgcgt gaaagatgat ttgtacaagg aattgggttt
    11221 ggacaacccc gatttggaca atgacgcgct gctgcgtgcc atcgccgatc atcccgccct
    11281 gttggagcgt ccgattgttt tggcaaacgg taaggctgct gtcggcagac cgttggaaaa
    11341 tatcgaagcg gtattgtgaa caaacggctg ttttgcagcc gcaacggctt gcgctattac
    11401 ctgttgggcg gtttctgttt gagtgttttt ccgcttttgc tggtgtttgc ctcatccgtt
    11461 tgggcggttt atcggacggg cgggcaggtt ttgccgccgt atgtccgggc ggatgccgcg
    11521 ctggtgttgg gcgcagccgc gtgggacaaa cgcccttccc cggtttttcg ggaacgcatc
    11581 aaccacgcca tcgcgcttta ccaaagccgc agggtaggca aaatcgtgtt tacgggaggg
    11641 cgaaccaaaa aaggctatat gaccgaagcc gaggtcgggc ggcggtacgc gctcaaacag
    11701 ggggttccgg cgcgcaacat cctgtttgaa aacacttcgc gcaacactta tgaaaacctg
    11761 aacaacatcc gtccggtttt gcgtgccaac ggtattgcca gcgtggtgat tgtcagcgat
    11821 ccctaccatt tggcgcgggc ggcggaaatg gcggaggatt tgggtgtccg cgtttatatg
    11881 tctgccacgc cgaccacgcg gtttgatgcg ggaaataaga aaaaaatctt tatgctgcaa
    11941 gaggggtatg cgttatccct ctaccgtttg gaaaaatggg gcagccgctt tttgggatgg
    12001 ctgtctgatt gaagcggtag aaaatgccgt ctgaaactta tccgcaggca gggttcggac
    12061 ggcatttttg atgcctaagc acggtaaaaa cagtaaaata aacgctttca aagatttcgg
    12121 agccattatg accgtcaaaa cccgtttcgc ccccagcccc accggttacc tgcacatcgg
    12181 cggcgttcgc accgccttgt tttcgtgggc gtttgcccgc catcataaag gcgaattttt
    12241 attgcgtatc gaagacaccg acttggcacg ttccaccgcc gaatccgtca acatcatcct
    12301 tgaaggcatg aaatgggtcg gtctcgatta cgacaacgcc gacaacgtgg tgtaccaaac
    12361 ccgccgtttc gaccgttata aagaagtcat tgccgaactc ttggcaaaag gcgatgccta
    12421 ctactgctat tgcagcaaag aagaattgga agcgatgcgc gagaaagccg aaaaagaagg
    12481 cacggcgact tacgaccgcc gctggcggcc ggaagcaggc aaaaccctgc ccgaaattcc
    12541 tgcaggcgtg caacccgtcg tccgcttcaa aacgcctttg gacggcgtta ccaaatggac
    12601 agacttggtc aaaggcgaaa tctccatccc caacgaagcc ctagacgacc tgattattgc
    12661 ccgcgccgac ggtacgccga cctacaactt ctgcgccgtg gtagacgact acgacatggg
    12721 cgttacccac attatccgcg gggacgacca tgtgaacaac accccgaaac aaatcaacat
    12781 cttgaaagcc atcggcgcga acctgcccga atacgggcat ctgccgatga ttctcaacga
    12841 acaaggcaaa aaaatctcca aacgcagcgg cgataccgtc gccattaccg atttcggcgc
    12901 aatgggcatt ctgcccgaag cgatgctcaa ctatttggcg cgtttgggct gggcgcacgg
    12961 cgacgatgag tttttcacga cggaacaatt catcgaatgg tttgatttga aagacgtttc
    13021 cccgtcccca agccgtatgg atttgaaaaa gctctattgg atcaacggcg aacacatcaa
    13081 aatcacaccc gacggcaaac ttaccgaact cgtcaaaccg cgccttgcgc tgcgcgatat
    13141 tcatgaaacc gaaaaacctg cgttggaaga cgtgttggca ctggtcaaag accgcgccca
    13201 agatttgaac gccttggcag acgaatgcct gtatttctac aaaaaacaag tccctgccga
    13261 agccgatgtt gccaaacact gggacgacga agccgccgcc cgtatgctgc gcttcgccga
    13321 acgcctcgaa gggctggaag actggaacgc caaagccatt cacgacctct tcaaaccttt
    13381 ctgcgacgaa gaaggcatca aaatgggcaa actcggtatg cccctgcgcc ttgctgtctg
    13441 cggtacggca aaaaccccga gcgtcgatgc cgtgttggca ttaatcagca aagaggaagt
    13501 gttgaaacgc atccgtgctt aagttatcca caggtgcggg caatgccgtc tgatgtcgga
    13561 atgcggcttc agacggcatt cagacggaag ttgaacatga aaaaaatatt gtattttctg
    13621 atgtttgttt tttctacaag cgtatgggca gggggtgcgg aagacaattt gctcagcatc
    13681 caatccggtt accgtgcttt actgcaaaag caaaacaatc tggacggaaa aatcatcggg
    13741 atgcagtcgg atttggaaga tgcgcgccgg cgtttgcagg cggctcaggc agacatcgcc
    13801 cgtttggaag cggaaattcc tgcagcaatg gcccaaaaag cccggcaggc tgaagagatg
    13861 aggcaaatcg gagtgcgttt ggaccatgct tggaatgcgg tttacggcgc aggggaacga
    13921 aagcgtcggg ggaattgacc gatgaattcc ctctttgtgg acaacactgt ttttattaca
    13981 cggctgaaag ccgggcatat cggcaggttg gttcaggcgt tgtttgagga gtggcacgga
    14041 tttgaaccgt ggtcttctgt ggataagatt cgtgcctatt acggcagatg tttgaaggat
    14101 gacgaactgc cgctggcttt tgcggctgtg gatgattccg gaaccctgtt gggttcggct
    14161 gcagtcaagc ggcatgatat ggaaaatttt ccacagtatg aatattggtt gggcgatgtc
    14221 tttgttttac ctgaatatcg cggaaaaggc attggcagga ggctggtcgc ccactgcata
    14281 ggcgcagcgc gttcgctggg gataaagttc ttgtatcttt atacgcctga tgtgcaaata
    14341 ttttatgaat cattcggctg ggcggttgtc gggcgacatt tccataacgg ggaatgggtt
    14401 acggttatgc gtttggatgt ggataaggtt taagccgaat gggcagatgc cgtctgagct
    14461 gttcggacgg cattttttat gtttggaaat ttcctgtcag atatagtgga ttaacaaaaa
    14521 ccggtacggc gttgccccgc cccggctcaa agggaacggt tccctaaggc gcccaagcac
    14581 cgggcggatc ggttccgtac catttgtact gcctgcggcc cgccgccttg tcctgatttt
    14641 tgttaatccg ccataaagtt tatccacaga tttttccata tggtttgatg ctgctccgcc
    14701 aacggaaatt aagatacgga tttgcacaaa tctttcagac ggtacagttc tgacaatgct
    14761 tcgcgcgggg tcaggctgtc gggatcgagg ttttccaggg ctgctgccaa tataccttca
    14821 aaatgttttt cctctgcttt atccacaaag cagtccacat tcggttcatc tcctttttca
    14881 gacggcatgg tactgaaaat atccagttgg ggacggtttg cggcggcttg gttttccagt
    14941 ccgttcaaat gcttttgggc ggctttcaat gcgcgcacag gcaggccggc gagtttggcg
    15001 acggcgatgc cgtagctttt tccggcggga ccgggttgga tttggtgcag gaacacgatg
    15061 tcccgtccct gttcgagcgc ggaaaggtgc atattgacgg cggcggcgtg ggcttcgggc
    15121 aggtaggtca gctcgaaata gtgggtggca aacaggctga aggatttgtt tttttgcagc
    15181 aggtgttcgg cgattgcgtg cgcgagggcg aggccgtcga aagtggaagt accacgtccg
    15241 acttcgtcca ttaaaacaat gctttgttcg gtggcgtgat gcaggatgta ggcggtttcg
    15301 ctcatttcga ccatgaaggt ggagcggttg gaggcgaggt cgtccgatgc gccgatgcgg
    15361 gtgaagattt gatcgacagg cccgattgtg gcggcatcgg caggcacgaa acagccggtg
    15421 tgtgccaata aaacaatcag cgcgacttgg cgcatatagg tggatttgcc gcccatattg
    15481 gggccggtga gcagcatgag gcggtgtttg tggtcgaggt cggtgtggtt ggctgtgaag
    15541 tggcgtacct gctgttcgac aacgggatgg cggccgtttt cgatgtggac aaccggatag
    15601 tcggcaaact cgggacggac aaagttccgc tcttttgcca aggctgaaaa tgtggacaac
    15661 acgtccagcg cggcggcggc tttggcggct ttttgaagct gcggcaatgc cgtccgaagg
    15721 tttttcaata cgccgtcaaa gagttgtttt tctaaggcga gggcttggtc ttgagcagtc
    15781 agcactttgt cttcaaaggc tttcagttcc ggcgtgatga agcgttcggc gtttttgagg
    15841 gtttgccggc gttggtagtc ggcaggtgct tgttcggctt gggttttgga caattcaatg
    15901 taaaagccgt gaacgcggtt gaactcgact ttgagtgtgg acaaaccggt acgttcgcgt
    15961 tccttggctt ccaaatccag caaaaattcg tcgccatggt tttgaatgcg gcgcaattcg
    16021 tccagttcgg gatgaaaacc gtggttgatg acattgccgt ctttcagcca gacggaaggt
    16081 tcgggcatca cggcggcttt gagggtttcg gcaacgggca gggtttcggg gaaaacggct
    16141 ttaagggttt ccaacaggct gctgccggtt gcggacaagt cgatttgtgc caactcgaac
    16201 agactgtcgc gtaaagatgc caaatcgcgc gggcgggcat tgccgacggc gatgcgggcg
    16261 gcgatacgtt cgatgtcggc aatgctcttc agatggcatt ggaggggttc gtattggctt
    16321 tccagcgcgg ttacggcttc ttggcgcgct cggatgtggg cgcggttgcg taaagggtgg
    16381 tgaagccaca atgccaacag gcggctgccc atgtgggtgg cgcagccgtc gagtatggaa
    16441 aacagggtcg gcgttttttt accggagagg gtttgcgtga tttcgagatt gcggcgcgtg
    16501 gcggcatcca tgccgatata ttggctgtcg gtttcgagcg acaggccgtc caaatgttgc
    16561 ggcatcaggt tttgcgtcag gcggatatag ttcaacagcg cacctgccgc gccaatcgaa
    16621 acggcgtgtt ctttgctgtc caaaccgaag ccgcgcaaat cttggcagcc gaaatattcc
    16681 gtcagcagtt tttcccccgc gtcggcggca aactgccacg cgttcaggcg tgtaacaccc
    16741 gatgccgtct gaagttgcgg tgcgttttta ctgtccggca gcaaaatttc cgccgcctgc
    16801 aggcgcgcca gttcgtcgtt caatttatcc gcagttgtca gcttggtttt gaattcgccg
    16861 ctttgcagcg atgcccacgc caaaccgatg tattttttgt cgggagacac ggcaacgatg
    16921 cggttggttt ccttgtcttc cagtaatgcg gaatcggtta gcgtgccggg cgttacgatg
    16981 cgcacgactt tgcgctccac cggccctttg cccgcgccga cttcgccgac ctgttcgcaa
    17041 atcgccacgc ttttgcccaa cttgaccagg cgcgccagat actgttccgc cgcgtgaaac
    17101 ggaacgcccg ccattttaat cggcacgccg tccatctgcc cgcgtgtggt cagggtgatg
    17161 tccaacaatt tcgccgcttc caccgcgtca tccaaaaaca gctcgtaaaa atcacccata
    17221 cggtaaaaca ctagtttgtc ggtatgttgc gcttttatgc cgaggtattg ctgcatcatt
    17281 ggggaaacgg cggatttgga catggggctg ccttattatt aggaaaacgg tattgtagca
    17341 aaaggttttg tcttcgacgg aatgagactg accgtaagct tgtcaataaa gttgtggaga
    17401 caaataggaa aacggcaaag ttatccataa gaatattatt aagtcaaaaa acatccacgc
    17461 ttatctgtct tatacggcaa gccttaaact caaatttatt taacaaaaag gtaatgaaaa
    17521 tattggatat ttgctactta tacacaagca ggtcggcaat catcaaaatc atcattaaaa
    17581 tttaaaatca aatattgaat gcgcgttttt gaaatagcga aattcacctg cgtcaaacaa
    17641 aacgcaagta attttatgta atagtggaat gtagttttat ttcagaatac aatacaggta
    17701 tcggacttta tttcacaacc gggagacaaa atatgagcat caaagtagcg attaacggtt
    17761 tcggccgcat cggccgcctc gcattgcgtc aaattgaaaa agcccacggc atcgaagtcg
    17821 ccgccgtcaa cgacctgacc cctgccgaaa tgctgctgca ccttttcaaa tacgacagca
    17881 cacaaggccg tttccaaggt actgccgaat taaaagacga tgccatcgtg gtaaacggca
    17941 gagaaatcaa agttttcgcc aatccgaatc ccgaagaatt gccttggggc gagttgggtg
    18001 tggatgtcgt cctcgaatgt accggtttct ttaccaacaa aaccaaagcc gaagcacata
    18061 tccgtgccgg cgcgcgcaaa gtcgtgattt ccgcacccgg cggcaatgat gtgaaaaccg
    18121 tcgtatatgg cgtaaaccaa gacatcttgg acggtagcga aactgtcatt tccgccgctt
    18181 cctgtaccac caactgcctt gccccgatgg cggcagtcct gcaaaaagag ttcggcgtag
    18241 tcgaaggcct gatgaccacc atccacgcct acaccggcga ccaaaacacc cttgacgcgc
    18301 cgcaccgcaa aggcgatttg cgccgcgccc gcgccgccgc gctcaacatc gtgcccaaca
    18361 gcaccggcgc cgccaaagcc atcggtctgg ttatccccga attgaacggc aaactcgacg
    18421 gctccgccca acgcgtccct gttgccaccg gctcgctgac cgaattggtt tccgtcctcg
    18481 aacgccctgc aaccaaagaa gaaatcaacg ccgcgatgaa agccgcctcc agcgaatctt
    18541 acggctacaa cgaagatcaa atcgtttctt ccgacgttgt cggcatcgaa tacggctcgc
    18601 tctttgacgc aacccaaacc cgcgtgatga ccgtgggcgg caaacaactg gtgaaaaccg
    18661 ttgcctggta cgacaacgaa atgtcctaca cctgccaact cgtccgtact ttggaatact
    18721 tcgcaggcaa aatctaaggc ttgaacaaac ctgtggataa gtaaatgccg tctgaacaca
    18781 ttgcgttcag acggcattgt ttatctgtaa cttgatattg cggcttatgg cgaacaaaca
    18841 acagccgttt gttcaactgc tatgcggcaa aaccggattt tgcccgattt aaagcggggt
    18901 tggggaaaga ttaataaccg tcgcgcggtt ttcctcgatt tgaaacctga cttcgtaatc
    18961 cgcaatattc atcacataaa tccgttcggg aatattctga taggcggggc gcggatcttg
    19021 ggcaatgctt tggctgatga ggtttttggt gtttgcagat aaattttccg cgccgatgtt
    19081 ttcctgccaa acgacttcca actctacggg tttgccgctg acgaaaccgg atgcggcatc
    19141 gggtttggat tcgataaagg ggatataagg cttgatgtcc acaatcggcg tgccgtccag
    19201 caggtctgag ccgctgcaat agaggcggac gggtttgccg gtttcgatgc gttcgagttt
    19261 aaggagagag agtccgagat ggttggggcg gtgggggctg cgcgtggcga acacgcccat
    19321 tttttgtttg ccgccgagcc gtggcgggcg caccatttgc gcccaacctt catccaatac
    19381 gccgtggaag ataaaactta tccacacata atcgaaatct tccaacccgc gcacgctgtc
    19441 tgcggtaaat tcgggattca gctcgatgca ggcttctgcg gcggagacca aaccgggctg
    19501 gcgggcgatg ccgaatttct gtttgtaggg cgagcgggcg gtgccgatgg gggtaatggt
    19561 ataagtcata agattgtgga taagtttttt ggaaaaacct tatcttatca cagccggttt
    19621 taccgctttc gggtagtaat ttgttataat acagggcatt taaatcgcgt tgaaataaag
    19681 tagcacagaa tcctcgtgtc caagacgctc ttaaaaaggc attggagtat tgataaaaaa
    19741 gaagcataac ggttcgttat aacgaagagg gaatcccgta tattacaccc aagtcaggtt
    19801 gttatctttc cttttggata tcacttacag gaggtgagat ctgaaatttt gggtaataaa
    19861 atcggattac agcttctagc aaggagtacc ttaggtatag ctaaaatgga gggggtggat
    19921 atgacatatc atatccacct agatggattg tgctccttaa ataaagaagg taagagtttt
    19981 gttattcgta aaatagagaa tgacgatctt aagtgaagaa gtaatgagat gattgtttcc
    20041 attgatgttg atgcacaaaa aacgtttacg ccactgtgtc ctgacgaact gcccgtgaac
    20101 gaggggcatt tgattgtcga ggagttaaat gcccaagccg ctttggcgga tttgcgtgtg
    20161 atgacgaaag atgcgcatca tatggcggcg aaatggcttg tggataaccc tgttgatatg
    20221 ttgaagccga caggtttgtc cgatgcggat ttgacttggg tggctcatgc gatggtcggt
    20281 acgtgcggct atgaattgtt ggacggtctg ccttccgcca aggaatacga ttattgcgtt
    20341 tggaaaggtg tcgatcccga attgcatcct tacggcgcgt gttttcacga tattgaggaa
    20401 aaactgagca ctggattgat tgagtggctg cgttgtcaaa atacgaatat ggtcattgtc
    20461 ggcggcttgg ctacggatta ttgtgttaaa acaacggttt tgcagttact taaaggcggt
    20521 cgttggcagg ttatcgtgaa tgaagcggct tgtcggggta ttgcgcccga taccattgaa
    20581 gcagcgtggc aggaaatgcg ttcttcgggt gcgataattt tgaaaaacgc cgaaaaaatt
    20641 aaaaaatata ttaataatca ataacttata attgtttcac gtgaaacacc ctgtctatat
    20701 atgaaaattt tgcttgtccg tttgtccagt atgggtgatt taattcacac tttgcccgca
    20761 atcgaagatt tggcgcgaca atgctctgat gtagaactgc attggctatg tgaagccggg
    20821 tttgcgggta ttgcacggtt gcatccgttt gtaaaaaagg tccatgtaat gaagtggcgg
    20881 caatggcgca aacatctctt tcaggctgaa acttggcggg agatgggtcg tctgaaacag
    20941 gctttgctgc aggaagcatt tgattttgta ttggacagtc agggtctgat taaaagcgcg
    21001 tgtttcgcca aaatggcaaa atcccctatt tatggtttgg ataaacacag tgcgcgtgag
    21061 ggggtggctg ctttggcgta tgataaaaag tatgtcgtac cgaaaggtag aaatgccgtt
    21121 tggcgcaacc gtgatctgtt tgcccaggtg tttgggtatg caatgcctga gacgcaggta
    21181 tttggtttgt ccgttcctga agcaagccgt ctgaaaaatt tagcgcagcc gtattatgcg
    21241 gctttgcacg cgaccagtcg ggacagtaag ttatggccta tggaaaattg gcgggagttg
    21301 ctgcagaaac tgaatcaaaa acaacaatgc aatgtttatc tgccttgggg aaacgaggct
    21361 gaaaaagtgc gtgcggaaca gattgcagac gggctgccgt ttaccatagt gtgcgctaaa
    21421 atgaatttat tacaggcggc gtatctgttg aaacacgcgg ttggaatagt tggtgtagat
    21481 accggtttgc tgcatttggc aaatgccttg gaaaaacctg tggtcggcat ttataccgat
    21541 accgatccga ttaaaacagg cgttcaagtt tcggctattg caaaaaatgt gggcaatatc
    21601 gggcagattc cgaccgcaga tttggtttat caaacgctga tggattgtgt ttcagcagat
    21661 aaaggctaaa gggtcgtcta aaactgatat ggcggcatga tattttccaa tttattagat
    21721 acaggaatgt atatccgcca gcctgagtaa atactttaaa aatggtataa tcggtaaaat
    21781 tatccgaaag attgctaaat aaattcgttt ttaaggaaaa cggatttgat tttataaaga
    21841 agaaggtttg gtttcgctgg atggtgaaag cagcgttctt tttaggagaa ttcaatgaaa
    21901 gcactggtcg cagtaaagcg cgtagtggac tacaacgtca aagtccgtgt gaaagccgat
    21961 ggttcggatg tggacatcgg caatgtcaaa atgtcgatga acccgtttga tgaaatcgct
    22021 gtggaagaag ccgtccgttt gaaagaagcc gggaaagtaa gcgaaattgt agcggtttct
    22081 ttgggtgaaa agaaatgcga agaaaccttg cgtaccgctt tggcaatggg tgccgaccgt
    22141 gccattcata ttgaaaccga tgtgaaatta gagccgctgg cagttgccaa actgctgaaa
    22201 gctgttgcgg acaaagaaaa tccgcaaatt ttctttttgg gcaaacaagc gattgatgac
    22261 gatgccaatc aagtggcgca aatgctggca gctttgttga atgcggcgca aggtacattt
    22321 gtttcaaaag tacaaattga aggtgatgaa gtacagattg tgcgcgaaat tgatggcggc
    22381 gaagaaacga ttgcgttgaa actgcctgca gtcatcagcg cagatttgcg tttgaacgag
    22441 ccgcgctttg tcaaactccc caatattatg gcggcaaaga aaaaacctct ggaaaaactg
    22501 gattctgccg atttggctac cgatatttcg cctcgtctga aaacggtgaa atttgccgaa
    22561 cctaaggcgc gtcaggcagg cgtaaaagta gcaagcgttg ccgaattggt tgaaaaattg
    22621 aaaaacgaag ccaaagtgat ttgaggaggc tgaaatgagc gtattgatta ttgccgaaca
    22681 cgacaacaaa cagttgaatc ctgccacttt gcatgctgtt gccgctgccg ccaaactggg
    22741 caaggtcgat ttattggttg tcggaaacgg cgcatcgtcc gtcgtggaat tcgcgaagca
    22801 agtagcggga gtggaaaaag ttttggttgc agatgctgct cattatgctg aaggtttggc
    22861 tgaagagttg gctccgctgg ttgtcaaatt ggcggcggat taccgctatg ttgcagcaac
    22921 ggcaaccaca ttcggtaaaa accttttgcc ccgcgtagcc gccttattag acgtaccgca
    22981 aatttctgat ttgaccgaga ttgtagataa cacgactttt gtacgtccga tttatgcagg
    23041 taatgcattt gaaaccgtgc aagccgattc agaaaaattg gtgctgacct tccgtgtgac
    23101 ggcttttgac gcagtggcgg cgcaaggtgg taatgctgag gtaattaatg ttaaaacaac
    23161 ccctgcccaa aacctgagtc gttttgttaa ccgtcaactt tcccattccg atcgtcccga
    23221 actgactcag gcaaaagtga ttgtttccgg tggtcgtgcg ttgggtagtg tggaaaaatt
    23281 cagtgaagtg ctgacaccgt tggcggatgt tttaggtgcg gcaatcggtg catcccgtgc
    23341 ggcggttgat gccgagtatg caccaaacga tgctcaagtc ggacaaaccg gtaaggtggt
    23401 tgcgccgcag ctctattttg caatcggtat ttcaggtgcg attcaacacg ttgccggtat
    23461 gcaggacagt aaggtgattg ttgcaatcaa caaagatgcc gatgcgccga ttttcaatgt
    23521 agccgattac ggattggttg gcgatttatt tgaaattgtt ccacaattaa tagaattatt
    23581 gaaaaattga tgtttcacgt gaaactttca ggcgactttg ttattaatga ggtcgtctaa
    23641 aaacatttca gcatgattac gacttataaa accattactt ccccgacgca ggctgagttt
    23701 aaagataaag gcagccgttt tattgcattt gcctatccga ttcggacatt ggctgatgtg
    23761 aaaaaatacc tcaatctgtt aaaggaagag cattataaag cgcggcattg gtgctatgcc
    23821 tatcgtttag gtgtgaacgg gatgcagttt cgcggcaacg atgatggaga gccaccagga
    23881 agtgctgggc ggccaatttt gggacagatt gattcggtgg gtatcactga tgttttggtc
    23941 gtggtcgtcc gctatttcgg tggtgcttta ttgggcgttc ccggcttgat tcacgcatac
    24001 aaagaggcaa cggctcaggc gttggcgatc gcggaagtgg ttgaaaagaa tattgaaaaa
    24061 accgtttggc tgaaatgtga gtatccgttt ttgaatgaag caatatgcat tgccaaacaa
    24121 tatcaggcgg atatattgga gcaggatttg cagttggatt gccgattgac ggtaagtttg
    24181 tcgttggcaa attatgaggc ctgtgttgcg gcttggaaga atacacggca ggttgaagta
    24241 aatacggaaa agccttttga atgaaaggtt gtatgaaatg ctttgtaatg gtatttcagg
    24301 caacctcttc gctgattaat tttcttgtgt atatctgtct aaggtatcga cgctggagca
    24361 taaatatagc caagccaatt gatggaattc gcccggcgcg ttccataatg catcttcact
    24421 cataatgcta tattcgcctt ctgtttgcaa attcagttct accccgtctt taatagtctg
    24481 atggcgcacc tgatactcgt gggtatagaa attgtccata tcgcgaatta aagcgacggc
    24541 atatttccaa cggcggatgt tttcttccag ttgcagtagt aaatgacacc attcgcggta
    24601 tttgctttgg atttcatcaa tacgtttttg cgtgtttgct tgttcttttt taatttgtga
    24661 ataagttgaa taggttgcag agtggaatga agtggtcttt tgtttgattc tactaaaatt
    24721 tcttcagatg ggacaaaagt tcctttgtat cgagttttcg ttaaaagtac atatttgtca
    24781 aggagatggc atgaaactgc tggttatcgg taatggcggt cgcgaacacg cgctggcttg
    24841 gaagttggcg caatcgccca aagtggaaac agtatttgtt gcgcccggta atgccggtac
    24901 ggcgattgaa tccaagctcc aaaacattgc cttgaccgcg tatcaggatt tgattgaatt
    24961 ctgccgtaaa gaaaatattg tttttaccgt cgtcggccct gaagcgcctt tggcggcagg
    25021 tattgtggat gattttcgtg ccgcagggct gaaaatattt ggtccgacac aatatgcggc
    25081 gcagttggaa agttctaaag atttcgccaa agcatttatg gtgaaataca atattccgac
    25141 cgcgcaatac caaacctttg aaaatgccga tgccgcacat gattacgtca atcagaaagg
    25201 tgcgcctatc gttatcaaag ccgatggttt ggtggcaggt aaaggcgtga ttgtggcaat
    25261 gactttggat gaagcgcatg ctgcgattga cgatatgttg ttgggcaata aaatgggcaa
    25321 tgccggcgaa cgcgttgtga ttgaagattt tctgcaaggc gaagaagcga gctttatcgt
    25381 tatggttgat ggcaatcatg tattacctat ggcgaccagt cgagaccaca aacgtctttt
    25441 agacggagat aaaggcccga atacgggcgg tatgggtgcg tacagtcccg cgcctgtggt
    25501 aacgcctgct gtgtacgagc gtgcgatgaa cgagattatt ttgccgaccg tagcgggtat
    25561 gaaagcggag gggcacgagt tcaccggctt tttgtacgca ggtttgatga tcgatcaaag
    25621 cggtgcaccc tatacgattg agtttaactg ccgtttcggc gatcccgaaa cccagccgat
    25681 tatgagccgt ctaaacagcg atttggcgga tttggttgaa gcggcaatag acggcagact
    25741 ggacagcgtc aaagcggaat ggaatccgca aactgccgtg ggtgtggtac tggcggcgca
    25801 aaattacccc gaaacaccca agaaaggcga tgttatttcc ggtttggatg acgtcaaccg
    25861 aatcggcaaa gtattccatg ccggcacaac ggtaaacgag aaaggcgacg tgttgaccaa
    25921 cggcgggcgc atattgtgtg ttgtaggatt gggcgacgat gtggcgcaag cgaaagccaa
    25981 ggcgtatggc gcgttggaaa aaatcagctt cgacgggatg caataccgta aagacattgc
    26041 cgataaagcg attaaccgtt aattagaaag aggatgatgc cgtctgaagc caagtatgac
    26101 tgatgcgctt cagacggcat tttatattat gttattttcg agaattatcg cagcatcagc
    26161 gcaacgtaag ttaagcgttt atttgaaaaa aggcggtttg gttgcttatc cgaccgaatc
    26221 ttgttatggc ttggggtgtc ttccgacatt agccaaagca ctcggtaagt tggcgcattt
    26281 gaaaaaaagg ccgcaacaca agggtatgat tgtcatcggg aatcaacttg aacaattgca
    26341 gcctttactt caaatgccgt ttgaaaacat tcaaaccatg cttagaaacg aatggcctgc
    26401 tcctaagact ttcctattgt tggctaaatc tggcgtatta cctgcgttgc gcgggaagag
    26461 gcgcagcaag cttgcggtca gagtgcccga tcatacaggt gcaaggcgtt tgtgtcaggc
    26521 attgggtatg cctttggttt ccacttcatg taatcgggcg ggtaaacgcg cgtgtcggac
    26581 ggagagggaa gtcagaaggc agttcggacg cgatgtgtgg attgtcggtg ggagaatcgg
    26641 caggcagaaa tcgccgagtc agattatcga tggggaaaca ggtaaacgtt tgcgttagat
    26701 atggatgctt gagtgaaaac ttttttgcat acacaaagaa aaaatttttt ggatggtatt
    26761 tctctacatg attgttatcg cacggcgata aaggtagaag gacgcaacgt ctgctttgat
    26821 tttgaggacg gttttgtcgt tctggacaat aatccgaaca atcaagcggg caagcatctg
    26881 aaaacagatt tttcccgtgt tgttttaacc catgaaaata gaaacgccga agacgactat
    26941 ttggtcgata tttttgaaga catcgtcttt ttagggaaac gtttgtttac agtcagaaaa
    27001 tttcttgatt tttctgaatt gcttgaaatg atcaatgcac aaggctattt tcttgaattt
    27061 ctgtatctgt atgaatgtat cggtgtcaaa acaagcgatt attttttaga ggctgtgttg
    27121 gttacgggac ggagccggga atgtaaaaaa tgctttatca aaattatgag ggcaagcagt
    27181 tttgtgtatc aatggaacaa tttacgtttg aatagtgaga ttgtatagcg ggtttatatt
    27241 tcggatggaa gccggtttaa aaaaataatg tggataattt cagggaatgg caaaatgtcg
    27301 tctgaaatgc tgatatttca gtattccaga cggcattttt ataataaggc ttatggataa
    27361 atttgtgtat aagttgaaat cagagttttt tcccgcatac ggtttcatat tgtttttcag
    27421 ttaatgtccc ggacaggatg ctcatcgggc ggagggaaga ggctgtgtag ttttgtgtgg
    27481 aaatttccgt gttttttgta tcaaataact gtagcgaact taagcggtat gttttgttgt
    27541 tgcagtggat ttcccactcg gcaatggcag tcttgtatgc gggggtgttg gcaaaacgtt
    27601 cttgtttcag attggtaaca acttttttat cttggaaaat catcagattt ccgttttttc
    27661 tcacactgtc tttattaata tatgtatgaa tattgccgtt tgagattgtg ccgatatttt
    27721 cccatcgggc agacttgtcc ggtgtgctgc aggcggttat caaaataggg agtaaaacga
    27781 aagataggaa gattgggcgc attagggttt ccttaatcat tga
//
LOCUS       DAXFZM010000016        27138 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.016, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000016 DAXFZM010000000
VERSION     DAXFZM010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 27138)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27138)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27138
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.016"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..277
                     /locus_tag="ACFJAG_000606"
     CDS             <1..277
                     /locus_tag="ACFJAG_000606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HFC3979972.1"
                     /translation="KEKFIAGVEALKAQRPSFKTYVLIKTGRKLSRATGTMLSEDDRK
                     LGEKYPNDLFLTLYQVVGNKDKGWQGKDFWLPNIKLPHNGLVYQSAK"
     gene            complement(340..1404)
                     /gene="hemE"
                     /locus_tag="ACFJAG_000607"
     CDS             complement(340..1404)
                     /gene="hemE"
                     /locus_tag="ACFJAG_000607"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004853 - uroporphyrinogen decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HFC3979973.1"
                     /translation="MTLLKNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAG
                     SFLDLCKNTGLATEVTIQPLERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRA
                     LQHESDIAKLHVPDMEKLQYVFDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGGS
                     KEFRTIKTMMYSRPDLLYKILDTNAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAF
                     KEFSLKYIRQIVAGLKRESEGRRVPVIVFAKGGGLWLESMAQIGADALGLDWTCNIGE
                     ARRRVGNQVALQGNFDPSALFGTPESIRTEVARILTGYGHGSGHVFNLGHGINQHADP
                     EHAKILVDTVHELSRQYHGG"
     gene            complement(1479..2696)
                     /locus_tag="ACFJAG_000608"
     CDS             complement(1479..2696)
                     /locus_tag="ACFJAG_000608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme biosynthesis protein HemY"
                     /protein_id="HFC3979974.1"
                     /translation="MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAF
                     VLGSLIAVVVWYFLFKFIIGVLNIPEKMQRSGSARKGRKAALALNKAGLAYFEGRFEK
                     AELEASRVLGNKEAGDNRTLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYL
                     LLAESALNRRDYEAAEANLHAAAKMNANLTRLVRLQLRYAFDRGDALQVLAKTEKLSK
                     AGALGKSEMERYQNWAYRRQMADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLG
                     LYADAVKWVKQHYPHNRRPELLEAFVESVRFLGEREQQKAIDFADSWLKEQPDNALLL
                     MYLGRLAYGRKLWGKAKGYLEASIALKPSIPARLVLAKVFDETAQSQKAEAQRNLVLA
                     SVAGENRPSAETR"
     gene            complement(2693..3967)
                     /locus_tag="ACFJAG_000609"
     CDS             complement(2693..3967)
                     /locus_tag="ACFJAG_000609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HFC3979975.1"
                     /translation="MPSETSSPRKENETEVHIPAAPFIVKQSGSNALAACALVLAALG
                     LGASGFLFVQGQNVLKNQELAFNQKIDKAALGESENAALLKDNLNRQSAIQSELDRLD
                     SGVKANGEQILMTQKAYRELTKGRADWLVDETETILNLAAQQLVLTGNIQTAVGVLEH
                     IDSRLSRFDQAELLPIKQAVSSDLAELKNRPYVDISGTALRLDRLETAVSGLPLILDG
                     VLKPGVQARNEAVSASWWQNVWEKSLGTLKGLVEIRRLENNDAMLISPEQAYFVRENL
                     RLRLLDARTALMQRNGEVYQGDLNNAEAAVRQYFDAKSPATQSWLKELAELKTLDVRM
                     TADDGLKTSLNAVRAYRDGTRMTAAENQEAEQAASEPANENTASEPAAASDVKAIEAP
                     SLPSERKPEQPAKKQPAPEKAGRSPSAKGERA"
     gene            complement(4039..4803)
                     /locus_tag="ACFJAG_000610"
     CDS             complement(4039..4803)
                     /locus_tag="ACFJAG_000610"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004852 - uroporphyrinogen-III synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006780 - uroporphyrinogen III biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HFC3979976.1"
                     /translation="METAKPVMLIVRPSGRAKDDVEVCRRAGWQAEVLSPIEIETDEA
                     SLKRLPEMYARADAVFWVSPTAVETAVPYLNLSDGIKAHIAVGQGSRRALARYAGAGV
                     FAPEDGNDSEAVLRLPVWNSLPEGARVLSVRGHGGRDFLMNALQEKGFRTEVAEVYFR
                     RHKPLNFQNFQTENIAAAYITSTELVQSLFAQLPPQFSRFFKSLLYFTHHPRIAEALK
                     REGVCSVETVPTLEAALSYSSISVSDGMVFPGTSNQ"
     gene            complement(4821..5243)
                     /locus_tag="ACFJAG_000611"
     CDS             complement(4821..5243)
                     /locus_tag="ACFJAG_000611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein Gly1ORF1"
                     /protein_id="HFC3979977.1"
                     /translation="MKKMFLSAALLLSAAAQTVWADTVFSCKTDNNKYIEVQKINRNL
                     YEYSFGSAAKKEIAIRNSKADLLGRSDRWQGMGSGRRATMKFQNGEFMYTVWTGFDSV
                     THTESSGVVVERRGKEVARVGCTPKTAQANFNDDDFSR"
     gene            complement(5525..6493)
                     /locus_tag="ACFJAG_000612"
     CDS             complement(5525..6493)
                     /locus_tag="ACFJAG_000612"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HFC3979978.1"
                     /translation="MVELQEIFDVSYGSKLDLNKMSSFNPTINFVGRSGKNNGVTASV
                     DLLKNTKPYPAGLLTVALGGSVLSTFLQNKPFYTAQNVAVLNPKTEMTEQQKLFYCAA
                     IFANAYRFSACGREANRTLRQLFVPSLDEIPSWVESVNLNPSAGVTEPKLKEPLDLPV
                     VRQSKRLDEIFTIQNGIAATKLKEFEQRQKDTVVYIRPASTQARTLRSYIARDSVDEK
                     HIFPCHTLFTSTNGEGSHTYSYVSTCEFVANSDVAVLTPIQSDMPIEVKLYYAKCITA
                     NRYLFSYGRKPKGEKLKSIMLPYFDQQEDFDYICRFIHTLLFSNNL"
     gene            complement(6493..7317)
                     /locus_tag="ACFJAG_000613"
     CDS             complement(6493..7317)
                     /locus_tag="ACFJAG_000613"
                     /inference="COORDINATES: protein motif:HMM:NF014442.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HFC3979979.1"
                     /translation="MFALAASNMILRGDGKANLHQSSCFMTDFQDLIKNPKPETGLKR
                     PNVGFLNPPYAQSKSDAELHELYFVKEMLDMLAEGGTGIAIIPVSCVIAPSKAKSEIV
                     KYHRLKAVMSMPSELFYPVGTVTCIVVFEAHKPHFQTVVIDPDTQEEISTKKACRKTW
                     FGYWRDDGFEKTKHLGRIDLYDRWQGIKARWLEHYLNNEVHTGESVTAFVTDNDEWVA
                     EAYLETDYSKITRADFEQVVREFALFQLLGAEVGPTENLDNESYEDDDNNDFGDDE"
     gene            complement(7347..7988)
                     /locus_tag="ACFJAG_000614"
                     /pseudo
     CDS             complement(7347..7988)
                     /locus_tag="ACFJAG_000614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711434.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            complement(8157..8477)
                     /locus_tag="ACFJAG_000615"
     CDS             complement(8157..8477)
                     /locus_tag="ACFJAG_000615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2322 family protein"
                     /protein_id="HFC3979980.1"
                     /translation="MNFQDYLATFPSIDHLGGLDVQDAEGKTVHHIPAVQGKLGSLKL
                     YNALAERFDGKLGKEAAEQGLIWFAEHVADARAHPGKHPNIDFLENVVQSGETLLLKP
                     LAAQ"
     gene            complement(8500..9126)
                     /gene="upp"
                     /locus_tag="ACFJAG_000616"
     CDS             complement(8500..9126)
                     /gene="upp"
                     /locus_tag="ACFJAG_000616"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004845 - uracil phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006223 - uracil salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HFC3979981.1"
                     /translation="MNVNVINHPLVRHKLTLMREADCSTYKFRTLTTELARLMAYEAS
                     RDFEIEKYLIDGWCGQIEGDRIKGKTLTVVPILRAGLGMLDGVLDLIPTAKISVVGLQ
                     RDEETLKPISYFEKFADSMDERPALIIDPMLATGGSMVATIDLLKEKGCRNIKALVLV
                     AAPEGVKAVNDAHPDVTIYTAALDSRLNENGYIIPGLGDAGDKIFGTR"
     gene            complement(9232..9543)
                     /gene="grxD"
                     /locus_tag="ACFJAG_000617"
     CDS             complement(9232..9543)
                     /gene="grxD"
                     /locus_tag="ACFJAG_000617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Grx4 family monothiol glutaredoxin"
                     /protein_id="HFC3979982.1"
                     /translation="MASIHDQIKEVVTTHRVVLFMKGTKQFPQCGFSSRAVQILNAAG
                     CTDYVAVNVLENPEVRQGIKEYSDWPTIPQLYVNGEFVGGSDILMEMYEAGELQELLK
                     A"
     gene            complement(9644..9835)
                     /locus_tag="ACFJAG_000618"
     CDS             complement(9644..9835)
                     /locus_tag="ACFJAG_000618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF333 domain-containing protein"
                     /protein_id="HFC3979983.1"
                     /translation="MSALLPAACQHVSDRHGKFRFQFCIAKGGRREVKKDESGGGYAL
                     CHLPDSRIVEEWEYCRSQH"
     gene            complement(9884..10663)
                     /locus_tag="ACFJAG_000619"
     CDS             complement(9884..10663)
                     /locus_tag="ACFJAG_000619"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HFC3979984.1"
                     /translation="MHIIDSHCHLNFEGLKERLPEVLSNMEANGVGQALAISVSRESF
                     SEVFVVAEAHEHIYCTIGVHPDSKEAEEFSIAEMAEAATHPKVVGIGETGLDYYWCKG
                     DLSWQHKRFADHIEAANQTGLPVIVHTRDAAADTLAILKECKTNSGVIHCFSEDVGFA
                     RAAMDLGLYISFSGIVTFKNAPLVQEAAKYVPDDRILVETDAPFLAPVPKRGRQNEPA
                     FVRHTAEHIAKLRNQTLEQVAAYTTENFYRLFKKVPDMRVV"
     gene            complement(10668..11018)
                     /locus_tag="ACFJAG_000620"
     CDS             complement(10668..11018)
                     /locus_tag="ACFJAG_000620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HFC3979985.1"
                     /translation="MSDGQNIPAKMMSLQLKDMNLLYSSYMPFLEHGGLFVQTDDVFS
                     IGDDILLAVEILNFPKLFLPTKVAWINPASTSSKPKGVGLAFTKHENCLKVKDQIEVE
                     LGSTISGSRPTFTM"
     gene            complement(11022..11999)
                     /locus_tag="ACFJAG_000621"
     CDS             complement(11022..11999)
                     /locus_tag="ACFJAG_000621"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HFC3979986.1"
                     /translation="MIYPWHQEQWRQIAEHWTSRPNAWLFVGKKGTGKTAFARFAAKA
                     LLCETPAPGCKPCGECMSCHLFGRGSHPDFYEITPLADEPENGRKLLRIKIDAVREII
                     DNVYLTSVRGGLRVILIHPAESMNVQAANSLLKVLEEPPPQVVFLLVSHAADKVLPTI
                     KSRCRKMVLPAPSHGEALAYLRDRGVAEPEERLAFHSGAPLFQEEGELRELRAKLLEI
                     LAEPRLLKILDYAALFDKEKLPLAVFVGWMQKWLVDLGLCLQHMKPVYYPAYEDRLLQ
                     TASGFRPRNVFAAEDMLKQLAPYGFHTLNVKMQIEHLLINYLELKKENR"
     gene            complement(12033..13163)
                     /locus_tag="ACFJAG_000622"
     CDS             complement(12033..13163)
                     /locus_tag="ACFJAG_000622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HFC3979987.1"
                     /translation="MFTDENMTAKEELFAWLRHMNKNKGSDLFVTTHFPPAMKLDGKI
                     TRITDEPLTAEKCMEIAFSIMSAKQAEEFSSTNECNFAISLPDTSRFRVNAMIQRGAT
                     ALVFRAITSKIPKFESLNLPPALKDVALKKRGLVIFVGGTGSGKSTSLASLIDYRNEN
                     SFGHIITIEDPIEFVHEHKNCIITQREVGVDTENWMAALKNTLRQAPDVILIGEIRDR
                     ETMDYAIAFAETGHLCMATLHANSTNQALDRIINFFPEERREQLLTDLSLNLQAFISQ
                     RLVPRDGGKGRVAAVEVLLNSPLISELIHNGNIHEIKEVMKKSTTLGMQTFDQHLYQL
                     YEKGEISLQDALKNADSAHDLRLAVQLRSRRAQSSDPDLELL"
     gene            13331..14032
                     /locus_tag="ACFJAG_000623"
     CDS             13331..14032
                     /locus_tag="ACFJAG_000623"
                     /EC_number="3.2.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008782 - adenosylhomocysteine
                     nucleosidase activity [Evidence IEA];
                     GO_function: GO:0008930 - methylthioadenosine nucleosidase
                     activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009164 - nucleoside catabolic process
                     [Evidence IEA];
                     GO_process: GO:0019509 - L-methionine salvage from
                     methylthioadenosine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'-methylthioadenosine/adenosylhomocysteine
                     nucleosidase"
                     /protein_id="HFC3979988.1"
                     /translation="MSLKTVAVIGAMEQEIELLREMMENVKAVSFGRFSAYEGELAGK
                     RIVLALSGIGKVNAAVATAWLIRQFAPDCVINTGSAGGLGKGLKVGDVVIGTETEHHD
                     VDVTAFGYARGQVPQLPARFASDGILIETAKRAARTFEGAEVEQGLIVSGDRFVHSSE
                     GVAEIRKHFPEVKAVEMEAAAIAQTCHQLETPFVIIRAVSDSADEKADISFEEFLKTA
                     AASSAKMVAEIVKSL"
     gene            14174..15967
                     /gene="lepA"
                     /locus_tag="ACFJAG_000624"
     CDS             14174..15967
                     /gene="lepA"
                     /locus_tag="ACFJAG_000624"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor 4"
                     /protein_id="HFC3979989.1"
                     /translation="MKNIRNFSIIAHIDHGKSTLADRFIQYCGGLDLREMSTQVLDSM
                     DIEKERGITIKAQTAALNYKARDGQVYQLNLIDTPGHVDFSYEVSRSLSACEGALLVV
                     DASQGVEAQTVANCYTAIDLGVEVVPVLNKIDLPAADPERVEQEIEDIIGIDAVGAVQ
                     CSAKSGIGVEDVLEEIVAKIPAPTGDENAPLQAVIVDSWFDNYVGVVMLIRVKNGTIK
                     LKDKVRFMSTKAETQVEQLGVFTPKSVQKQELKAGEVGFLITGVKELGQAKVGDTVTL
                     VANPATEPLPGFQEVQSQVFAGLYPVESHDYEALRDALEKLQLNDASLKFEPEVSQAL
                     GFGFRCGFLGLLHLEIVQERLEREFDMDLITTAPTVVYEVVLKSGEKIEVENPSKLPD
                     IGSIETILEPIITATILVPQEYVGNVMTLCNQKRGVQVNMQYMGRQVMLTYDLPMNEV
                     VMDFFDKLKSTSRGYASLDYHFKEFQPSDLIKLDIMVNGEKVDALSLIVHRQSAVHKG
                     RELASKMRELIPRQMFDIAVQAAIGSRIIARENVKALRKNVLAKCYGGDITRKKKLLE
                     KQKAGKRRMKQVGNVEIPQSAFLAILQVSDK"
     gene            16113..17132
                     /gene="lepB"
                     /locus_tag="ACFJAG_000625"
     CDS             16113..17132
                     /gene="lepB"
                     /locus_tag="ACFJAG_000625"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HFC3979990.1"
                     /translation="MNTMLMSGAAAALLAGIILYFKSDKKRQENGEWSSGLEYAYILT
                     AVGVFAALSLFMSFTAVFLIFVVLCGTAWGVYKYRLKTHPEISESSHFGDYFGSFFPT
                     VLVLFLIRSFIAEPFQIPSSSMRPGLIKGDFILVGKFSYGLRAPVLNNVFIPTGKIER
                     GDVVVFNYPLQPEMTYIKRIVGIPGDIVEYRDKVLTVNGKPASDIPDGTYRYPDDTDP
                     SEIHNTDMFRSGLDGKSFNILKKEGQPAVSLPVLGKYTSDIMSENGYSIDQSGLNHCQ
                     YADDGSGFVCKVPEGRYFAMGDNRNNSADSRYWGFVDDKLVVGKAMFILMNFGDFGRA
                     GTAIR"
     gene            complement(17237..17344)
                     /locus_tag="ACFJAG_000626"
                     /pseudo
     CDS             complement(17237..17344)
                     /locus_tag="ACFJAG_000626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(17568..17717)
                     /locus_tag="ACFJAG_000627"
     CDS             complement(17568..17717)
                     /locus_tag="ACFJAG_000627"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979991.1"
                     /translation="MDWQAVKTGKTKHADNGAERKMPSEALSDGIGAGRIKKAASAGM
                     AMQLK"
     gene            complement(17763..18670)
                     /locus_tag="ACFJAG_000628"
                     /pseudo
     CDS             complement(17763..18670)
                     /locus_tag="ACFJAG_000628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273746.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
     gene            complement(18979..19911)
                     /gene="cysK"
                     /locus_tag="ACFJAG_000629"
     CDS             complement(18979..19911)
                     /gene="cysK"
                     /locus_tag="ACFJAG_000629"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004124 - cysteine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HFC3979992.1"
                     /translation="MKIANSITELIGNTPLVKLNRLTKGLKAEVAVKLEFFNPGSSVK
                     DRIAEAMIEAAEKAGKINKNTVIVEATSGNTGIGLAMVCAARGYKLAITMPESMSKER
                     KMLLRTFGAELILTPAAEGMAGAIAKAQSLVDAHPDTYFMPRQFDNEANPEVHRKTTA
                     EEIWNDTDGKVDVFVAGVGTGGTITGVGEVLKKYKPEVKVVAVEPEASPVLSGGEKGP
                     HPIQGIGAGFIPTVLNTKIYDSIAKVPNEAAFETARAMAEKEGILAGISSGAAVWSAL
                     QLAKQPENEGKLIVVLLPSYGERYLSTPLFADLA"
     gene            complement(20107..20712)
                     /locus_tag="ACFJAG_000630"
     CDS             complement(20107..20712)
                     /locus_tag="ACFJAG_000630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979993.1"
                     /translation="MILLHLDFLSALLYAAVFLFLIFRAGMLQWFWASIALWLGISVL
                     GVKLMPGMWGMTRAAPLFIPHFYLTLGSIFFFIGYWNRKTDGNGWQADPEHPLLGLFA
                     VSNVSMTLAFVGICALVHYCFSGTVQVFVFAALLKLYALKPVYWFVLQFVLMAVAYVH
                     RCGIDRQPPSTFGGSQLRLGVLAAMLMQVAVTAMLLAEIGR"
     gene            complement(20709..21560)
                     /gene="dapF"
                     /locus_tag="ACFJAG_000631"
     CDS             complement(20709..21560)
                     /gene="dapF"
                     /locus_tag="ACFJAG_000631"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008837 - diaminopimelate epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HFC3979994.1"
                     /translation="MKTLKFTKMHGLGNDFMVIDAVSQDFTPEDVPIAAWADRFRGVG
                     FDQLLVVGCSETEGVDFRYRIFNADGSEVGQCGNGARCFARFVADKGLTDKKEICVET
                     AKGIIFPKLSDNGMVTVNMGKPKFMPSEIPFVPESGEGDDACIYGVHLESGIQPVSCV
                     NMGNPHAVIVVDDVECAPVRETGSRIEPHRQFPERVNVGFMQVVGRTAIRLRVFERGV
                     GETQACGTGACAAVVAGIRLGLLDEGKTVEVVLPGGTLYIEWACGGDVMMTGPAETVF
                     EGELAYS"
     gene            21697..22011
                     /locus_tag="ACFJAG_000632"
     CDS             21697..22011
                     /locus_tag="ACFJAG_000632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3979995.1"
                     /translation="MSRLFLLLFPWATLAACTRNIPASPAVSNCAHLHNRTVLYFDAH
                     GKPADSTAKGGFYRTVEIHDTNRILIQDFNSTGNALVKPYWSDCRKLSVFPDKHLTMS
                     HP"
     gene            22008..22676
                     /locus_tag="ACFJAG_000633"
     CDS             22008..22676
                     /locus_tag="ACFJAG_000633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HFC3979996.1"
                     /translation="MNHDITFLTLFLLGFFGGTHCIGMCGGLSSAFALQLPPHINRFW
                     LILLLNTGRISSYTAIGLMLGLIGQLGISLDQTRVLQNILYTASNLLLLFLGLYLSGI
                     SSLAAKIEKIGKPIWRNLNPILNRLLPIKSIPACLAVGILWGWLPCGLVYSASLYALG
                     SGSATTGGLYMLAFALGTLPNLLAIGIFSLQLKKIMQNRYIRLCTGLSVSLWALWKLA
                     VLWL"
     gene            complement(22749..24872)
                     /gene="pnp"
                     /locus_tag="ACFJAG_000634"
     CDS             complement(22749..24872)
                     /gene="pnp"
                     /locus_tag="ACFJAG_000634"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004654 - polyribonucleotide
                     nucleotidyltransferase activity [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HFC3979997.1"
                     /translation="MMFNKYVKTFQYGNQTVTLETGEIARQAAAAVKVSMGDTVVFVA
                     VTTNKEVKEGQDFFPLAVDYLERTYAAGKIPGGFFKREGKQSEKEILTSRLIDRPIRP
                     LFPEGFYHDIQIVAMVVSVDPEIDSDIPAMLGASAALVLSGVPFAGPIGAARVGYING
                     VYVLNPTKAELAKSQLDLVVAGTSKAVLMVESEAKILPEDVMLGAVVYGHDQMQVAIN
                     AINEFADEVNPEVWDWKAPETNEELVAKVRGIAGETIKEAFKIRQKQARSAKLDEAWN
                     AVKEALITEETDTLAANEIKGIFKHLEADVVRSQILDGQPRIDGRDTRTVRPLNIQTG
                     VLPRTHGSALFTRGETQALAVATLGTSRDEQIIDALSGEYTDRFMLHYNFPPYSTGEV
                     GRMGAPKRREIGHGRLAKRALLAVLPKPEDFSYTMRVVSEITESNGSSSMASVCGGCL
                     SLLSAGVPLKAHVAGIAMGLILEGNKFAVLTDILGDEDHLGDMDFKVAGTTEGVTALQ
                     MDIKIQGITKEIMQIALAQAKEARLHILDQMKAAVAGPQELSAHAPRLFTMKISQDKI
                     RDVIGKGGETIRSITAETGTEINIAEDGTITIAATTQEAGDAAKKRIEEITAEVEVGK
                     VYEGIVVKILDNNVGAIVSVMPGKDGLVHISQIAHERVRNVGDYLQVGQVVNVKALEV
                     DDRGRVRLSIKALLDAPVREENAAE"
     gene            complement(25106..25969)
                     /locus_tag="ACFJAG_000635"
     CDS             complement(25106..25969)
                     /locus_tag="ACFJAG_000635"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004639 -
                     phosphoribosylaminoimidazolesuccinocarboxamide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HFC3979998.1"
                     /translation="MSEIGLVKIYSGKVRDLYEIDDKRMLMVASDRLSAFDVILDAPI
                     PGKGEILTQISNFWFKKLAHIMPNHFTGDTVYDVLPENEAKALEKRAVVAKKLTPVKV
                     EAIVRGYLAGSGWKDYQKTGSVCGIRLPEGMREAQQLPEVIFTPSTKAAVGDHDENIS
                     FEECGRIIGKELAEEVRDKAVRLYTEAAEYAKSRGIIICDTKFEFGLDEEGTLTLMDE
                     VLTPDSSRFWPADQYEVGINPPSFDKQFVRDWLEQSGWNKKAPAPKVPADVIRKTVEK
                     YQEALTLLTQD"
     gene            26162..27025
                     /gene="rfbD"
                     /locus_tag="ACFJAG_000636"
     CDS             26162..27025
                     /gene="rfbD"
                     /locus_tag="ACFJAG_000636"
                     /EC_number="1.1.1.133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008831 - dTDP-4-dehydrorhamnose reductase
                     activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose reductase"
                     /protein_id="HFC3979999.1"
                     /translation="MRILLTGSKSQLAHCLRDRLPEDWETIATDSASLDITDADAVCN
                     MVKSFQPDAIVNTAAYTAVDKAEGDAAAAFAVNASAVYNLALAAHRAHARFIHISTDY
                     VFDGKGKIPHQESDFTNPSNVYGQSKTAGELLALSANPDSLILRTSWLFSEYGDNFVR
                     TMLNLARERSPLSAVHNQIGCPTYAGDLSAAIIRLLQQSNPVRGIYHYAGGKSVSWYE
                     FARHIFQTALQQDASFPVPELKAVSDEGSAAAAPRPAYSILDCRKIENDFGIKPSDWQ
                     KALAQVVSKLL"
BASE COUNT         6512 a         7294 c         6592 g         6740 t
ORIGIN      
        1 taaggaaaaa tttattgctg gtgtagaagc attaaaagca caacgtccaa gttttaaaac
       61 ctatgttttg atcaaaaccg gacgtaaact ttctcgagca accggcacaa tgctttcgga
      121 agacgaccgt aaattaggag aaaaatatcc caatgattta ttccttacgc tttatcaagt
      181 agtaggaaat aaagacaaag gttggcaggg aaaagatttt tggttaccca atatcaagct
      241 accacacaat ggcttggtgt accaaagtgc aaaatgaagc atatgccgtc tgaaaacttc
      301 cgattcttca gacgacatat cgggcggttt cctgccggct tacccgccgt gatactgccg
      361 cgacagctcg tgtacggtgt cgactaagat tttggcgtgt tcggggtcgg cgtgttggtt
      421 gatgccgtgt ccgaggttga agacatggcc gctgccgtgt ccgtagccgg tcaggatacg
      481 tgcgacctcg gtgcggatgg attcgggcgt accgaagagg gcggacgggt cgaagttgcc
      541 ttgcagggcg acttggttgc cgacgcggcg gcgtgcttcg ccgatgttgc acgtccagtc
      601 caagcccaat gcgtctgcgc cgatttgggc catgctttcc agccacagcc cgccgccttt
      661 ggcaaacacg ataacaggca cgcggcgacc ttcgctttca cgtttgagtc cggcaacgat
      721 ttggcggatg tatttgaggc tgaactcttt aaacgccgcg tcgctcaaca cgccgcccca
      781 agtgtcgaaa atctgcaccg cctgcgcgcc cgcgtcgatt tgggcgttga ggtaggcggt
      841 aacggcttgg gcgttggtat cgaggatttt gtacagcaaa tcggggcgcg agtacatcat
      901 ggttttgatg gtgcggaatt ctttgctgcc gccgccttcg accatataac aggcgagcgt
      961 gaacgggctg ccggagaagc cgataagcgg tacgcggccg tccaatgctt tacggatgga
     1021 agttaccgcg tcgaaaacgt attgcagttt ttccatgtcg ggaacgtgca gcttggcgat
     1081 gtcggattcg tgttgcaagg cgcgtttgaa tttcgggcct tcgccttcgg caaaatacag
     1141 ccccaagccc attgcatcgg gaacggtcaa gatgtcggaa aacaaaatcg ccgcgtccaa
     1201 atcgaagcgt tccaaaggct ggatggtgac ttcggtcgcc aatccggtgt ttttgcacaa
     1261 atcgaggaag ctgcccgctt tcgcgcgcgt ggctttgtat tcgggcagat aacgccccgc
     1321 ctggcgcatc atccaaatcg gtgtgtattc gacgggctgt ttgagcaggg cgcggaggaa
     1381 ggtatcgttt tttaaaagag tcatacgggt tttctgtcaa tctgtttgtc aagtgaaatg
     1441 gttttcagac ggcatttcaa cgatgccgtc tgaaggtttc aacgggtttc ggcggaaggg
     1501 cggttttccc cggcaacgct tgccaaaacc aagttgcgct gtgcttcggc tttttgcgac
     1561 tgtgcggttt cgtcaaaaac ctttgccaac accaaacgcg ccggaatact cggcttcagt
     1621 gcaatactcg cttcaaggta gccttttgcc ttaccccaaa gtttgcggcc gtaggcgagc
     1681 cggccgagat acatcagcag aagcgcgtta tcgggctgtt ctttcagcca agaatcggca
     1741 aaatcgatgg ctttctgctg ttcgcgctcg cccaaaaagc gcacgctttc gacaaaggct
     1801 tccaaaagct cggggcggcg gttgtgcgga taatgctgtt tgacccattt gaccgcatcg
     1861 gcatacagtc ccaaacgttc gtacttttcc gcaaccgata cgctcaattc cccgtttttg
     1921 aggctgtcgg gaatccgctt caggcaggtt ttcaaagcgg cggcatcggc agcatccgcc
     1981 atctggcggc ggtatgccca attttgatac cgttccattt ccgatttgcc caacgcgccc
     2041 gccttggaaa gtttttcggt ttttgccaga acctgcaacg catcgccccg atcgaaggcg
     2101 taacgaagtt gcagacgcac gaggcgcgta aggttggcat tcatcttcgc cgccgcatga
     2161 agattggctt ccgccgcttc gtaatcgcgc cggtttaacg ccgattccgc cagcagaaga
     2221 tagcgggaaa gctgctgttt ttccggcagt ttggcgattt ccgcaagata acggtcgcgc
     2281 agctcgatat tttccatctg tcctgccgcg tgcgcgccca gcatcaatgc caaagtccgg
     2341 ttgtctccgg cctctttgtt gcccaacact cgagaggctt cgagttccgc cttttcaaaa
     2401 cgcccttcga aatacgccaa acctgcctta ttcaaggcaa gcgcggcctt gcggcctttc
     2461 cgcgccgaac cggaacgctg catcttttcg gggatattaa gtacgccgat gatgaattta
     2521 aacaggaaat accacaccac gacggcaatc agcgaaccta acacaaaagc gtgcaggttg
     2581 attctgagca tggtctgtcc gagtacgata tacacgtcgc cggtgtaaat gcccgaagcc
     2641 agcgccagtc cgacggcggc ggcaaacagg acgacaatcc agactaccgt tttcatgcgc
     2701 gttctccttt agcggacggc gaacgccctg ccttttccgg tgcgggctgt ttttttgcag
     2761 gctgttccgg tttgcgttcc gaaggcaggg acggtgcttc tatggccttc acatccgatg
     2821 cggcagccgg ttcggaagct gtgttttcgt ttgccggttc ggaagccgcc tgttccgctt
     2881 cttgattttc cgccgccgtc atgcgcgtac cgtcgcgata ggcgcggacg gcatttaaac
     2941 tggtcttcaa gccgtcatcc gccgtcatgc gtacatccag tgttttcaat tccgccagtt
     3001 ctttcagcca cgactgcgtg gcgggcgact tggcatcgaa atactgtctg acggcggctt
     3061 cggcattgtt caaatcgccc tgatagactt cgccgttgcg ctgcatcaat gcggtgcgcg
     3121 catccaacag gcgcagacgc aggttttcac gcacaaaata tgcctgttcg ggagaaatca
     3181 gcatggcatc gttgttttcc aaacggcgga tttcgaccag ccccttcaat gtgccgaggg
     3241 atttttccca tacgttctgc caccatgaag cggaaacggc ttcgttgcgg gcctgtacgc
     3301 ccggtttcaa tacgccgtcc aaaatcagcg gcagtccgga tacggcggtt tccaaccggt
     3361 cgaggcgcaa tgccgtgccg gaaatatcga catagggacg gtttttcagt tccgccaaat
     3421 cgctgctgac cgcctgtttg atcggcagaa gctctgcctg atcgaaacgg gacaggcggc
     3481 tgtcgatatg ctccaacacg ccgactgccg tttggatatt gccggtcaac accagctgtt
     3541 gcgccgccag attgagtatg gtctcggttt cgtccaccag ccaatcggca cgccctttgg
     3601 tcagctcgcg ataggctttt tgcgtcatca ggatttgttc gccgttggct ttgacaccgc
     3661 tgtccaaacg gtcgagttcg gactgtatgg cactttggcg gttgaggttg tctttgagca
     3721 gggcggcgtt ttccgactcg cccaaggcgg ctttgtcgat tttctggttg aatgccagct
     3781 cttggttttt caagacattc tgtccttgga caaacaaaaa accacttgca cccaaaccca
     3841 atgccgccaa taccaaggcg caggccgcca aagcgttgct gccggactgt ttgacgataa
     3901 aaggagcggc gggaatgtgt acttctgttt cgttttcttt gcgtggggaa gaggtttcag
     3961 acggcatttc ttttgatgcc tgtatctcgc gtacgggttc ggatgatttg ttttcaggtt
     4021 cgcccaccgt tttgctcctt attggtttga ggttccggga aagaccatgc cgtctgaaac
     4081 ggaaatggaa gaataggaaa gcgcggcttc cagcgtaggg acggtttcga ccgaacacac
     4141 gccttcgcgc ttcaatgcct ccgcaatgcg cggatgatgg gtaaagtata gcaaggattt
     4201 gaagaatcgg gaaaattgcg gcggaagctg tgcaaacagc gactgcacaa gttctgtgga
     4261 cgtaatatag gcggcggcaa tattttcggt ttggaaattt tgaaagttca aaggtttatg
     4321 ccgtctgaaa tagacttctg ccacctccgt ccgaaaacct ttctcctgca aggcattcat
     4381 cagaaaatcc cgcccgccgt gtccgcgcac agacaatacg cgcgcacctt cgggcagact
     4441 gttccaaacc ggcaggcgca aaaccgcctc gctgtcgttg ccgtcttcag gtgcaaacac
     4501 gcccgcgccc gcataacgcg ccaaggcacg gcggctgcct tgccctacgg caatgtgcgc
     4561 ctttatgccg tctgaaaggt taaggtacgg gacggcggtt tcaacggcgg tcggactgac
     4621 ccaaaacacg gcatccgcac gggcatacat ttccggcagc cgtttcaggc ttgcttcgtc
     4681 ggtttcgatt tcaatcggac tcaacacttc cgcctgccat ccggcacgac ggcagacttc
     4741 cacatcgtcc ttcgccctgc ccgacgggcg gacaatcagc atgacgggct tcgctgtttc
     4801 catcgcctta tccgccccga ttaccgggaa aaatcgtcat cgttgaaatt cgcctgcgcg
     4861 gttttcggcg tacagcctac ccgtgcgact tccttgcccc tacgctccac aacgacaccg
     4921 ctgctttccg tatgagtcac ggaatcgaag cctgtccata cggtgtacat aaattcgccg
     4981 ttttggaatt tcatcgttgc ccggcgtccg ctgcccatgc cttgccacct gtcggaacgc
     5041 cccaacaggt cagctttgct gttgcgtatg gcaatttctt tttttgccgc actgccgaac
     5101 gaatattcgt aaagattgcg gttgattttt tgaacttcta tgtatttgtt gttgtccgtt
     5161 ttacaggaaa ataccgtatc cgcccacacg gtttgggcgg cagccgacag aagcaatgcg
     5221 gcagaaagga acattttttt catcataatt tccttaatgg ttgaaacccc gccattcgga
     5281 catccgtcct tcgtggcagc agcatcagat tttatttgaa aggggtgtaa cccctttcaa
     5341 attagggcaa cacatagggc ggcgctttat gtgtcgtcct gtgtgttgaa acatcattgc
     5401 ccgtatcctg aaatagaagg ctgtgtttta acaatccgtt gattgcttaa gatgaattca
     5461 cactaaaaaa cagttctcta tttcatctat tacggcgggt tgttttgttt ataagggtgg
     5521 taatctacaa attgttacta aatagcaagg tgtgaatgaa acggcagata taatcaaaat
     5581 cttcttgttg gtcaaaatac ggtaacataa tgctttttaa tttttcgcct ttgggtttac
     5641 gtccataaga aaacagatag cggtttgctg taatacattt agcgtaatac agttttactt
     5701 ctattggcat atcggactgt atgggtgtta atacggcgac atcactattt gctacaaatt
     5761 cacaagttga aacatagcta taagtatggc taccttcgcc attggtagaa gtgaaaagcg
     5821 tatggcatgg aaaaatatgt ttttcatcaa cgctatcacg agcgatataa cttcgtagcg
     5881 ttcttgcttg cgtactggca ggacggatat agacaaccgt gtctttttgc cgttgttcaa
     5941 attcttttaa tttggttgcg gcaatgccgt tttgaatagt aaaaatttca tcaagtcgtt
     6001 ttgattgtcg aaccacaggc aaatcaagcg gttcttttaa tttcggttcg gttacacccg
     6061 cagatggatt taaattcacg ctttcaaccc agcttgggat ctcatccaaa gatggcacaa
     6121 acagttgtcg taacgtgcgg ttagcttccc taccgcaagc agaaaaacgg taggcattgg
     6181 caaaaatagc agcacaataa aagagttttt gttgttctgt catttctgtt ttgggattta
     6241 aaacagcaac attttgagct gtataaaatg gtttgttttg taaaaaagta gataaaacag
     6301 aaccacctaa tgcaacagtt aataatcctg ctggataagg ttttgtattt ttcaataaat
     6361 ccacagatgc tgttacacca ttatttttgc ctgacctgcc tacaaagttg attgttggat
     6421 tgaagctgct cattttattc aaatctaatt ttgaaccgta actcacatca aaaatctctt
     6481 gcaattcaac cattattcat cgtctccgaa gtcgttattg tcatcgtctt catagctttc
     6541 attatccaaa ttttcagtcg gccctacttc cgctcccagt agttgaaata aagcaaattc
     6601 acgcacgact tgctcaaaat ctgctcgggt aattttggaa taatcagttt ccaaataggc
     6661 ttcggcaacc cattcatcgt tatcagttac aaatgctgtt accgattctc ctgtgtgaac
     6721 ttcgttgttt aaataatgtt ccaaccagcg cgctttaatg ccctgccagc ggtcgtataa
     6781 atcaatgcgt cccaagtgtt tggttttttc aaaaccgtca tcacgccagt agccaaacca
     6841 cgttttgcga caggcttttt tcgtgctgat ttcttcttgt gtgtccgggt caatcacgac
     6901 tgtctgaaaa tgcggtttat gggcttcaaa tacgacaatg cacgttaccg tgccaactgg
     6961 gtaaaacagt tcgctcggca tagacatcac ggcttttaag cgatgatatt tcacaatttc
     7021 gcttttggct ttgcttggtg caatcacgca actgactgga ataatggcaa tgcctgtgcc
     7081 accttctgcc aacatatcca acatttcttt gacaaaataa agttcatgca attcggcatc
     7141 gcttttggat tgggcgtaag gtggattgag aaagccaaca tttgggcgtt ttaagcctgt
     7201 ttcaggtttg ggatttttga ttaaatcctg aaaatcagtc atgaaacaac tgctttggtg
     7261 taaattggct ttaccgtctc cgcgtaaaat catattactg gcggcaagag caaacatttt
     7321 tgggttgttt tcaatgccaa tcagttgata ttttttagag atggcttacc caaattgcta
     7381 attctagcaa cagatttacc gtctaaattg ataccacaag gaacacaaac ttgttctttg
     7441 gaaatgccac gtttcgttgc tctcgttcct cgtttgtgag caggacgtgg cagattaaaa
     7501 tttttgtggt gccctttgta agaaatcgtc gaataagttt catcagcttg cacaatgccg
     7561 tctaactcaa cttcattcat catgttttga agtgcgtcca aaattttgtg ccgccaagta
     7621 aacgcagtag caagattgat tttgcaaatt tcagcacatt tgcgaagtgg gtatttttca
     7681 atcatacaat gaatgtattt ttcccaaact tcaatgtctt tttgcgtgtt gtagagaata
     7741 gtgcctgtct gctcaacaaa agacttttta caatcacgac acaaaaaacg ttggttgcca
     7801 caatctttgc catttttgac gaaatgtgta gattggcaat gtgggcactt cgtaactttt
     7861 cttggttcaa tgactttttt aacctgttct tttgagctga cagaagtcaa aaaagcctgt
     7921 ttatccgtat cggacaaatt ttcaaaaagt tgttttaaaa tgtctaattc ttttgttacg
     7981 cccgacatta taaaatccct tatagttcaa tttgttataa gggattttat caaaaattag
     8041 tgcaaaaatc aacggattgt taaaacacag ccaaatagaa aagaaaatgc ccgttttacg
     8101 gtcttctttc cgacaaaatg ccgtctgaaa cgaatttcag acggcatggt cgaaaattat
     8161 tgcgcggcaa gcggtttgag caggagggtt tcgccgcttt gcacgacatt ttccagaaaa
     8221 tcgatgttcg gatgcttccc cggatgggcg cgcgcgtcgg caacatgttc ggcaaaccat
     8281 atcaaaccct gttctgccgc ttctttaccc aattttccat caaaacgttc cgccaaggca
     8341 ttgtacagct tgagcgaacc gagcttgccc tgaacggcgg gaatgtggtg aaccgttttg
     8401 ccttcggcat cctgaacatc caaaccgccc agatggtcga ttgaaggaaa tgtggcgaga
     8461 tagtcttgga aattcatatc aaatccgaaa atcagtcagt tagcgcgtgc cgaaaatctt
     8521 gtcgcccgca tcgcccagac cgggaataat atagccgttt tcgttcaaac ggctatccag
     8581 cgcggcggta taaatcgtaa catcgggatg cgcatcatta acagccttca cgccctcagg
     8641 ggcggcaacc aagactaagg ctttgatgtt gcggcaacct ttttctttca acaggtcgat
     8701 ggtggccacc atcgaaccgc ctgtcgccag cataggatcg ataatcaaag ccggacgctc
     8761 gtccatactg tccgcaaatt tctcaaaata ggaaataggc ttcagcgttt cctcgtcgcg
     8821 ctgcaaaccg accacgctga ttttggcagt cggaatcagg tcgagcacgc cgtcgagcat
     8881 acccaaaccg gcgcgcagga tggggacgac ggtcagggtt ttgcctttga tgcggtcgcc
     8941 ttcaatctgt ccgcaccatc cgtcgataag gtatttttca atttcaaaat cacggcttgc
     9001 ctcgtatgcc atcaggcgcg ccaactcggt ggtcagcgta cggaatttgt aggtgctgca
     9061 atccgcctcc ctcatcaggg tcagtttgtg gcggacgagc ggatggttga taacgttaac
     9121 gttcatcgcg gtgttccagt gtgattttga gacgcgtcat tatacttttt tttaatttgc
     9181 cggaaaagaa aatgccgtct gaaacacgtt cagacggcat tgccgaatcc atcaggcttt
     9241 cagcagctct tgcagctcgc ctgcctcata catttccatc aggatgtccg aaccgccgac
     9301 aaactcgccg ttcacataaa gttgggggat ggtcggccag tcgctgtatt ccttaatgcc
     9361 ttggcgtact tcgggatttt ccaatacgtt gacagcaacg taatcggtgc agcctgccgc
     9421 gttcaggatt tgcacggcgc gggaagagaa accgcattgc ggaaactgct tcgtaccttt
     9481 cataaacaat acgacgcggt gtgtcgttac tacttcttta atttggtcgt ggatggaagc
     9541 catcgcttat tccttttgat aaagttgaca aaatttgtca ggtagggcgc attatacgca
     9601 aaagcggaaa cttcccacaa tatttgccgt atatcgcgca gtatcaatgt tgcgaacggc
     9661 aatattccca ctcctcgaca atcctgctgt ccggcaaatg gcacagggca tatccgccgc
     9721 cgctttcgtc tttttttact tcccgtctgc cgcctttggc aatgcagaat tggaagcgga
     9781 atttgccatg cctgtccgaa acgtgttggc aggcagccgg cagcagcgcg gacatgcata
     9841 cggatgaatt gccttcatgg ttttccttat cgtcggcaca gggtcagacg acccgcatat
     9901 cgggtacttt tttaaacagc cggtaaaagt tttccgtcgt atatgccgca acctgttcca
     9961 atgtttgatt ccgcaatttg gcaatatgtt cggcagtatg acgcacaaaa gccggttcgt
    10021 tctgcctgcc tcgtttggga acgggggcaa ggaacggcgc atcggtttcc actaaaatgc
    10081 ggtcgtccgg aacgtatttc gccgcctcct gaaccaaggg ggcgttttta aaggtaacga
    10141 ttcccgagaa agaaatataa agccccaaat ccatggcagc ccgggcaaaa ccgacatcct
    10201 cggaaaaaca gtgaatcaca cccgaattgg ttttacattc ttttaaaatc gccaaggtgt
    10261 ccgccgccgc atcgcgcgta tggacgataa cgggcagtcc ggtttgattg gctgcttcga
    10321 tgtggtctgc aaagcgtttg tgctgccaag acaaatcgcc tttgcaccag taataatcca
    10381 aacccgtctc gccgatgccg accactttcg gatgggtggc ggcttcggcc atttccgcaa
    10441 tggaaaattc ttcggcttcc ttgctgtcgg gatgtacgcc tatggtgcaa tagatgtgtt
    10501 cgtgcgcttc ggcgacaaca aagacttcgg agaagctttc cctactgacg ctgatggcga
    10561 gtgcctgccc cacgccgttt gcttccatgt tggacaaaac ttcgggcagg cgttctttca
    10621 aaccttcaaa attgaggtgg cagtgcgaat cgatgatatg catagcgtta catggtaaac
    10681 gtaggtctgc tgccgctgat tgtgctgccc agttcgactt cgatctggtc tttgactttc
    10741 aggcagtttt cgtgttttgt gaatgccagc cccacccctt tgggtttgga ggaagtactc
    10801 gcaggattaa tccaggcgac cttggtcggc aggaacagtt tggggaagtt gaggatttct
    10861 acggcaagca gaatatcgtc cccgatggaa aatacgtcgt cggtctgcac aaacagaccg
    10921 ccgtgttcca aaaacggcat ataggagctg tacagcagat tcatgtcttt cagctgcaac
    10981 gacatcattt ttgccggaat attttgtccg tctgacataa ttcacctgtt ctctttcttc
    11041 aattccaaat agttgatgag cagatgctcg atctgcattt tgacatttaa agtatgaaac
    11101 ccgtaagggg caagctgttt gagcatatcc tccgccgcaa atacattgcg cggacggaaa
    11161 cccgatgccg tctgaagcag cctgtcttca taagcgggat aatagacggg tttcatgtgt
    11221 tgcaggcaca agcctaaatc gaccagccat ttctgcatcc acccgacaaa tacggcgagc
    11281 ggaagttttt ccttatcgaa aagcgcggcg taatccaaaa tcttcaacaa tctcggctct
    11341 gccaatatct ccagcagctt tgccctcaat tcccgaagct cgccttcctc ctgaaacagc
    11401 ggcgcgcccg aatggaaagc cagacgttcc tcaggctccg ccacacccct gtcgcgcaga
    11461 tacgccaatg cttccccatg cgaaggagcg ggcaaaacca tcttccggca gcggctttta
    11521 atggtcggta aaaccttgtc cgccgcgtgg cttaccagca aaaagaccac ttgtggcggc
    11581 ggctcttcca acactttcaa caaactgttg gcggcttgga cattcatact ttccgcagga
    11641 tgaatcagga tcacgcgcaa accgccccgt accgaagtca ggtacacatt atcgatgatt
    11701 tccctgacgg catcgatttt gatccgcaac agtttgcgtc cgttttcggg ttcgtccgcc
    11761 agaggcgtga tttcgtaaaa atcgggatgg cttccccgtc caaacagatg gcaggacata
    11821 cattcgccac agggtttgca gcccggtgca ggggtttcgc acaacagcgc cttcgccgca
    11881 aagcgggcaa acgcagtctt ccccgtcccc tttttgccaa caaacagcca cgcattagga
    11941 cggctcgtcc aatgctcggc aatctgccgc cattgttcct gatgccacgg ataaatcatg
    12001 tcaaactgcc cgtccggaaa tccataccgc catcagagca gttccaaatc ggggtcggaa
    12061 ctttgtgccc tgcggctgcg caactgtacc gccaaacgca aatcatgtgc ggaatcggca
    12121 tttttcaagg catcctgcaa ggaaatctcg cctttttcat acaattggta aaggtgttgg
    12181 tcgaaggtct gcatacccag ggtagtggat tttttcatca cttctttgat ttcatggatg
    12241 ttgccgttgt gaatcaactc cgaaatcagg ggcgaattga gcagtacctc gactgccgcc
    12301 accctgccct tgccgccgtc tcgcggaacg aggcgttgcg aaataaacgc ctgaaggttg
    12361 agcgacaaat ccgtcagcaa ttgttcgcgc cgctcctcgg ggaagaagtt gatgatgcgg
    12421 tcgagcgcct gattggtgct gttggcgtgc agcgtcgcca tacacaaatg ccccgtttcg
    12481 gcaaaggcga tggcgtagtc cattgtttca cggtcgcgga tttcgccgat aaggatcaca
    12541 tccggcgcct gacgcagcgt atttttcaac gccgccatcc agttttccgt gtccacgccg
    12601 acctcgcgct gggtaatgat gcagtttttg tgttcgtgga caaactcgat cggatcttcg
    12661 atggtgatga tgtgtccgaa cgaattttca ttgcggtagt cgataagcga ggcgagcgaa
    12721 gtcgatttgc ccgagccggt gccgccgaca aaaataacca gcccgcgttt tttcagcgca
    12781 acatccttca aggccggcgg caggttcagg ctttcaaact tgggaatctt gctggtaatc
    12841 gcgcggaata ccaacgccgt cgcaccgcgc tgtatcatcg cattgacgcg gaagcggctg
    12901 gtgtccggca ggctgatggc gaagttgcac tcgttggtcg atgaaaattc ttccgcctgc
    12961 ttcgcactca taatcgaaaa ggcgatttcc atacattttt ccgccgtcag cggttcgtcc
    13021 gtgatgcggg tgattttgcc gtccagcttc atagcgggcg ggaaatgggt cgtcacaaac
    13081 aggtcggaac ctttgttttt gttcatatgg cgcagccatg cgaacagttc ttcctttgca
    13141 gtcatatttt catcggtaaa catcctcgtc ccccaatctt caaacaatct gtaccttccc
    13201 attctaccaa aaatccgccg tgctgtctga aaccgtttca gacggcacgg acaaaccgcc
    13261 tccactcaat cctgccgtgt tagcgtgtat aattcggcgt tctatccgaa attcacagca
    13321 ggttagcaat atgtctttga aaacagtagc cgttatcggc gcgatggaac aggaaatcga
    13381 gcttttgcgc gagatgatgg aaaatgtcaa agccgtctct ttcggcagat tttccgccta
    13441 tgaaggcgaa ttggcgggaa aacgcatagt gcttgcattg agcggcatcg gcaaggtcaa
    13501 cgcggcggtt gcaacggctt ggcttatccg tcaattcgca ccggactgcg tcatcaacac
    13561 cggcagcgca ggcggtttgg gcaagggttt gaaagtcggc gacgtggtga tcggcacgga
    13621 aaccgagcac cacgatgtcg atgtaaccgc attcggctat gcccgggggc aagtgccgca
    13681 actgccggca aggttcgctt cagacggcat attgattgaa acggcaaaac gggcggcgcg
    13741 gacgtttgaa ggcgcggagg tagaacaagg cctgattgtc agcggcgacc gcttcgtcca
    13801 cagcagcgaa ggcgtggcgg aaatccgcaa gcacttcccc gaagtcaaag cagtggaaat
    13861 ggaagcggcg gcgattgccc aaacctgtca tcagttggaa acgccgttcg tcatcatccg
    13921 cgctgtttcc gattcggcgg acgaaaaggc agacatcagc tttgaagagt ttttgaaaac
    13981 ggcggcggca agttctgcaa aaatggtggc agaaatcgtc aaatctttat aaaaccttta
    14041 tcaaatcatg ccaaaacagc ggttttccgt tagaatatcg ggctatttcc acgttgcgcc
    14101 cgatattcgg acgtaccgct gtttgttcag acggcatttc taaaacctac cgttcagcat
    14161 taaaaacaac tcaatgaaaa atatccgaaa tttctccatc atcgcccaca tcgaccacgg
    14221 caaatcgacg cttgccgacc gcttcatcca atattgcggc ggtttggatt tgcgcgaaat
    14281 gagtacgcag gtgctcgatt ccatggacat cgaaaaagag cgcggcatca ccatcaaagc
    14341 gcaaaccgcc gcactcaact acaaagcacg cgacgggcag gtgtatcagc ttaatttgat
    14401 tgacacgccg ggacacgtcg acttctctta cgaagtttcc cgttcgctgt cggcttgcga
    14461 aggcgcgctt ttggtcgttg acgcgtcgca gggcgtggaa gcgcaaaccg tggcgaactg
    14521 ctataccgcg attgatttgg gcgtggaagt cgtgcccgtt ttgaacaaaa tcgacctgcc
    14581 cgccgccgac cccgagcgtg tggaacagga aatcgaagac atcatcggca tcgatgccgt
    14641 cggcgcggtg cagtgttcag ccaaaagcgg catcggcgtg gaagacgttt tggaagaaat
    14701 cgttgccaaa attcctgcgc cgaccggcga cgaaaacgcg ccgctgcaag ccgttatcgt
    14761 cgattcgtgg tttgacaatt acgtcggcgt ggtcatgctg attcgagtga aaaacggcac
    14821 catcaaactg aaagacaaag tgcgctttat gagcaccaag gcggaaacgc aggtcgagca
    14881 gctgggcgta ttcacaccga aatcggttca aaaacaagaa ctaaaagccg gcgaagtggg
    14941 ttttttgatt accggcgtga aagaattggg acaggcgaaa gtcggcgata cggttacttt
    15001 ggttgccaac cctgccactg agccgctgcc cggtttccaa gaagtacaaa gccaagtatt
    15061 tgcgggtctc tatcctgtgg aaagccacga ttacgaagcc ttgcgcgacg ctttggaaaa
    15121 attgcagctg aacgatgctt cgttgaaatt cgagcctgaa gtttctcaag cattgggctt
    15181 cggcttccgc tgcggcttct taggcctgct gcatttagaa atcgtgcagg aacgcttgga
    15241 acgcgagttc gacatggatt tgattaccac cgcgccgacg gtggtttacg aagtcgtgtt
    15301 gaaaagcggc gaaaaaatcg aagttgaaaa cccgtccaaa ctgcccgaca tcggcagcat
    15361 cgaaaccatt ctcgagccga ttattaccgc gaccatcctt gtgccgcagg aatacgtcgg
    15421 caacgtcatg actttgtgta accaaaagcg cggcgtgcag gtcaatatgc agtatatggg
    15481 ccgccaagtg atgctgactt acgacttgcc gatgaacgaa gtcgtaatgg actttttcga
    15541 caaactcaaa tccacttcgc gcggttatgc ttcgttggac taccatttca aagaattcca
    15601 accgtctgat ttgattaagc tcgacattat ggttaacggc gaaaaagtcg atgccttaag
    15661 cctgattgta caccgtcaaa gcgcggttca caaaggccgc gagctggcat cgaaaatgcg
    15721 cgaactgatt ccgcgccaaa tgttcgacat cgccgtccaa gccgccatcg gcagccggat
    15781 tatcgcccga gaaaacgtta aagccctgcg taaaaacgtt ttggcgaaat gttacggcgg
    15841 cgatattacg cgtaagaaaa aactgcttga aaaacaaaaa gcaggcaaac gccgtatgaa
    15901 acaagtgggc aacgtggaaa ttccgcaaag cgcgttcttg gcgattttgc aggtgagcga
    15961 caaataatat ttcggcacat agggcgggcg cgtcgggaac acctctcaaa ccgccctgat
    16021 ttcagcggca cgcgcccgca aacaaatttt gcaatttgcc gccttaaaac ggttgcacgg
    16081 ccgggcgggt ttttaaccgt taaggaacaa caatgaacac aatgctaatg tcgggcgcgg
    16141 ctgccgcgct gcttgccggc atcatccttt atttcaaaag cgacaagaaa cggcaggaaa
    16201 acggtgaatg gagttccggc ctcgaatacg cctatatcct gacggcggtc ggtgtgtttg
    16261 ccgctttgtc cctgtttatg agctttaccg ccgttttcct gattttcgtt gtattgtgcg
    16321 gtacggcttg gggggtatat aaataccgcc tgaagactca tcccgaaatc tcggaaagca
    16381 gccacttcgg cgattatttc ggcagtttct tccctaccgt tttggtattg ttcctcatcc
    16441 ggtcgtttat tgccgaaccg ttccaaatcc cgtccagctc gatgcgcccg ggattaatca
    16501 agggcgattt cattttggtc ggcaaatttt cctacggcct gcgcgcaccc gttttaaaca
    16561 atgtattcat ccccacgggc aaaatcgaac ggggcgatgt cgttgttttt aactatcctt
    16621 tgcagccgga gatgacctac atcaagcgta ttgtcggcat cccgggcgac attgtcgaat
    16681 atcgagataa agttttgacg gtaaacggaa aaccggcttc cgacattcct gacggcacat
    16741 accgttatcc tgacgatacc gacccatccg aaatccacaa cacggatatg ttccgcagcg
    16801 gtctggacgg caaatccttc aatattctga aaaaagaagg acagcctgcc gtttccctgc
    16861 ccgtattggg caaatatacc tccgatatta tgtctgaaaa cggatattcc atagatcaaa
    16921 gcggtctgaa ccattgccaa tatgccgacg acggcagcgg tttcgtgtgc aaagttcccg
    16981 aaggacgcta tttcgctatg ggcgacaacc gcaacaacag tgccgattcg cgctactggg
    17041 gctttgtgga tgacaagctg gttgtcggca aggcaatgtt cattttgatg aacttcggcg
    17101 atttcggcag ggccggcacg gcaatccgtt aagccggaaa attacgccgg aacatcaaaa
    17161 atgccgtccg aaccctgttt cagacggcat ttttatcatc aaactccttg tttccctacc
    17221 ggcagcctcg gggataatat agtggattaa atctaaacca gtacagcctg gcctcgcctt
    17281 gccgtactat ttgtactgtc cgcggcttcg tcgccttggc ctgatttgaa tttaatccac
    17341 tatatgcacc gccttgccgg cattatcgat atgggcggca catatggatt gcctggaaaa
    17401 atgatgcgtt cgggcggcgt atgatttgcc tgtgtttaaa tcatcggttg attttatccg
    17461 tcggcaagtg aaaagccggt tatttccgtt tgtgtggaaa cccatcccat tgaataaagg
    17521 gcatttcgtc cgactgacgg tgtgggcggc atatggaaat acggacatta ttttagttgc
    17581 attgccattc ctgcggaggc ggcttttttg attctgcccg ccccgatgcc gtctgaaagg
    17641 gcttcagacg gcattttccg ctccgcgccg ttgtcggcat gtttggtctt gccggttttg
    17701 actgcctgcc agtccaatcg tacgcaggtt tgccacggca gaaaatctga tgccgaccgg
    17761 agtcaaagct cggacggctg tttcagcgaa ccgaggtaaa tcgccgaaag cgtcagcacc
    17821 acccctgccc actgcacgcc ttcaatcgtt ttgcccaatc cgaaataatc gatgaacagg
    17881 gcggcgaccg gttcggacaa aagcaacagc cccgtcagcg acagggaaag cagcggaatc
    17941 gcataggcaa ccatcgccca cgcaaaacac tgcatcacca cgccccgtac acaagcacca
    18001 aacccgaatc tttccaagtg gtcggataaa gtgcgccgcc gtccatcagc aatgccggaa
    18061 caatcggcga tgccgcgccg cccaaactca aaatcatcat tgaaggaaaa agcgccacct
    18121 gttcgacttc atgagtcttg cggacgaaca ccatagatag ggcaagcatc agcccggaca
    18181 ccaaaccgct ggcgaatccc caaaccgcat taccgttgta gccgaattcc gcaccggcaa
    18241 tcatcgccac gcccacaacc gccgacatca agcttgccgc ctgcagcctg cccaaacgct
    18301 cgccgaaaaa gaaaacaccg attgccgaca agaaaaagat ttgcaggctg ttgagcaggg
    18361 tggaaatacc cggcccgacc gcgtgtatgc tttcgtgcca aagtgccaaa tcgaaagcga
    18421 gaaacacgcc cgccgtcagg gcatatcgga cggtttttct gttttttggg aatttttgtc
    18481 cgaaaaaccg tgccaaaaac caaaatacca ataccgaaat cagcaaccgc caaaatgcga
    18541 ttgcatacgg gccgacgggg acggatctga caatcaggct gcccaatccg aacaccgcgc
    18601 aacccagcac cagcaatggt gcggcatatt tttttccgtt accgaccaca atatcccctc
    18661 ccttccccat atggctgccg cgccgccggc aaaagtgccg ccattccgaa aatatgccgt
    18721 ctgaagccca aagccccggc tgcgcccgga caaacggctg actttacggg caggccggct
    18781 attttccgtt ggggcaaaat ccgtcctgcc ggataaaacc cgaataaaaa atatttccct
    18841 caagcaatgc ggcggcgcca acacctgatt aaaacacaac cggcgttttc ggtatatatg
    18901 caaaaacgca ttttccggca cggcgttaca ccgataccga aaaatgcgtc tgaatgtttc
    18961 gacaatccga ttaaagcatt atgccaaatc tgcaaaaagt ggcgtagaga gatagcgttc
    19021 gccataagaa ggcagcagca cgactatcag cttgccttcg ttttcaggct gtttggcaag
    19081 ctgcaacgcg ctccaaaccg ccgcaccgga agaaatgccc gccaaaatgc cttctttttc
    19141 cgccattgca cgggcggttt caaaagccgc ttcgttcggc actttggcaa tgctgtcgta
    19201 gattttggta ttcaaaacgg tcggaataaa acctgcgccg ataccttgaa tcgggtgcgg
    19261 gcctttttcg ccgccgctca atacggggga agcctcaggc tcgacggcaa ccactttaac
    19321 ttcgggtttg tattttttca atacttcgcc cacgccggta atcgtaccgc ccgtgccgac
    19381 gccggcaacg aagacatcga ctttaccgtc ggtatcgttc caaatttcct cggcggttgt
    19441 tttgcggtgg acttcgggat ttgcctcatt gtcgaactgg cgcggcataa aataagtgtc
    19501 tggatgagcg tccaccaagg attgcgcttt ggcaatcgcg cccgccatac cttcggcggc
    19561 gggggttaga atcagttccg cgccaaacgt gcgcaacagc attttgcgct ctttgctcat
    19621 gctttccggc atggtaatcg ccagtttgta gccgcgtgcg gcacatacca ttgccaaacc
    19681 gatacccgta ttgccgctgg ttgcttcgac aatgacggtg tttttgttga tttttcccgc
    19741 tttttcggcg gcctcgatca ttgcttcggc aatgcggtct ttgacgctgc tgcccggatt
    19801 aaaaaattcc agtttcacgg caacctctgc cttcaaacct ttggtcaaac ggttcagttt
    19861 gaccaaaggc gtgttgccga tcaattcggt gatgctgttt gcaattttca tcttctgctc
    19921 ctgaataata aggtttcgac agtaaggcgc aatccccatc ggtatcctgt ccgattgcag
    19981 gggatttgcg ccgaaccata aacaaatttc ggatatggct ttatcctaaa cctatgccgc
    20041 ctaaaaaacc aatacccaaa atttatttct ttataacttt ttgttccgat acagacggca
    20101 tcacaatcat ctgccgattt cggcaagcag catcgccgtt accgcaacct gcatcaacat
    20161 cgccgccaac acgccgagtc gcagctgcga accgccgaac gttgacggcg gctgccggtc
    20221 tataccgcag cggtggacat aggcaaccgc catcaataca aactgcaaca cgaaccaata
    20281 aaccggcttc agcgcataaa gtttgagcaa tgccgcaaac acaaacactt gaaccgttcc
    20341 cgaaaagcaa taatgcacca acgcacatat tccgacaaaa gcaagcgtca tcgatacatt
    20401 actgacggca aaaagcccga gcagcggatg ttcggggtct gcctgccatc cgtttccatc
    20461 tgttttccgg ttccaatacc cgatgaaaaa aaatatgctg cccaaagtca ggtaaaaatg
    20521 ggggatgaac aaaggcgcgg cgcgggtcat tccccacatc cccggcatca gctttacccc
    20581 taaaaccgag atgccgagcc acaacgcaat actcgcccaa aaccattgca acattcctgc
    20641 gcggaatatc agaaacagaa aaaccgccgc atacagtaag gcagacaaaa aatccaaatg
    20701 cagcaaaatc atgaatacgc caactcgcct tcaaacacgg tttccgcagg gccggtcatc
    20761 atcacatcgc cgccgcaggc ccattcgata tataaagtcc cgcccggcaa aaccacctct
    20821 accgttttcc cttcatccaa cagccccaga cggatacccg ccaccacagc cgcacacgcg
    20881 cccgtaccgc acgcttgggt ttcgcccacg ccgcgctcga acacgcgcaa acggattgcc
    20941 gtccgtccga caacctgcat aaagccgacg ttgacgcgtt cgggaaactg cctgtgcggt
    21001 tcgatacgcg aaccggtttc gcgcaccggc gcgcattcca cgtcatcgac tacaatcaca
    21061 gcatgaggat tgcccatatt gacgcagctg acaggctgaa tgccggattc gagatgcacc
    21121 ccgtaaatac aggcatcatc cccctcgccc gattcgggga caaacggtat ttcagacggc
    21181 ataaacttcg gtttgcccat attgaccgta accataccgt tatcggacaa tttcggaaaa
    21241 ataatgccct tggccgtttc aacacaaatt tctttcttat cggtcaaacc cttgtctgca
    21301 acaaaacggg caaaacaacg cgctccgttg ccgcattgcc cgacctcgct accgtcggca
    21361 ttgaaaatac ggtaacggaa atccacgcct tcggtttccg aacacccgac caccaaaagc
    21421 tggtcgaagc ccacgccccg gaagcggtcc gcccatgccg caatcggcac gtcctcgggg
    21481 gtaaaatcct gactgaccgc gtcaatcacc ataaaatcgt tgcccaaacc gtgcattttg
    21541 gtaaatttca aagttttcat attgttccga aatcccgtat tgtctgttgc ttccgaatcc
    21601 gaaatccccg agcccgaagg gaaatgcttc catctcccgc cgcctgagga ttaaaatgag
    21661 ccattatact gtttgttacc ccttacaaga aacacaatgt cccgcctgtt cctgctgctt
    21721 ttcccttggg caacccttgc cgcctgcacc cgaaacatac cggcaagccc cgccgtttca
    21781 aattgcgcgc atcttcacaa ccgcaccgtc ctgtattttg acgcacacgg caaacccgcc
    21841 gacagcacag caaagggcgg attttacagg accgtcgaaa ttcatgacac aaaccgcatc
    21901 cttattcaag actttaacag cacggggaat gccctcgtca aaccctattg gtcggactgc
    21961 cggaaattgt ccgttttccc cgacaaacat ctgaccatga gccatccatg aaccacgaca
    22021 tcactttcct caccctgttc ctgctcggtt tcttcggcgg aactcactgc atcggtatgt
    22081 gcggcggatt aagcagcgcg tttgcgctcc aactcccccc gcatatcaac cgcttttggc
    22141 tgattctgct gcttaacaca ggacggataa gcagctatac ggcaatcggc ctgatgctcg
    22201 gattaatcgg acaactcggc atttcactcg accaaacccg cgtcctgcaa aatattttat
    22261 acacagcctc caacctcctg ctgctctttt taggcttata cttgagcggt atttcttcct
    22321 tggcggcaaa aatcgagaaa atcggcaaac cgatatggcg caacctgaac ccgatactca
    22381 accggctgct gcccataaaa tccatacccg cctgccttgc tgtcggaata ttatggggct
    22441 ggctgccgtg cggactggtt tacagcgcat cactttacgc gctgggaagc ggtagtgcga
    22501 caaccggcgg actgtatatg cttgcctttg cactgggtac gctgcccaat cttttggcaa
    22561 tcggcatttt ttccctgcaa ctgaaaaaaa tcatgcaaaa ccgatatatc cgcctgtgta
    22621 caggattatc cgtatcatta tgggcattat ggaagcttgc cgtcctgtgg ctgtaagccc
    22681 cattcattcc cgatacccgt aaaaaatacc gtctgaaacc tgttcagacg gtattttcac
    22741 cctaagcgtt actcggcggc attttcttca cggacaggcg catccagcag ggctttgatg
    22801 gacagacgga cacgacctct gtcatccact tccaatgctt tcacgttcac cacctgaccg
    22861 acttgcaggt aatcgccgac attgcgtacg cgctcgtgtg cgatttggct gatgtgtacc
    22921 aaaccgtctt tgcccggcat cacgctgaca atcgcgccga cgttgttgtc gaggatttta
    22981 accacaatac cttcgtacac tttgcccact tccacttcgg cagtgatttc ttcgatgcgt
    23041 tttttcgctg catcgcccgc ttcttgagta gtcgcagcga tagtgatggt accgtcttca
    23101 gcgatattga tttcagtacc ggtttcagcg gtaatcgaac gaatggtttc gccgccttta
    23161 ccaatcacat cacggatttt gtcttggctg attttcatgg tgaacaaacg cggcgcgtgt
    23221 gcggacagct cttgcggacc cgcaacggca gctttcatct gatccaagat gtgcaaacgc
    23281 gcttctttgg cctgtgccaa agcaatttgc ataatctctt tggtaatgcc ttggattttg
    23341 atgtccattt gcagcgcggt aacgccttcg gtcgtaccgg ccactttaaa gtccatatcg
    23401 cccaagtggt cttcgtcgcc caaaatgtcg gtcaggacgg caaacttatt gccttccaaa
    23461 atcagaccca tcgcgatacc ggcaacgtgt gctttcaaag gcacgccggc agacagcagg
    23521 ctcaaacagc cgccgcagac agaagccata gaggaagagc cgttggattc ggtaatttcg
    23581 gagaccacgc gcatggtgta gctgaaatct tcaggtttcg gcaatacggc caacaacgca
    23641 cgtttagcta aacggccgtg accgatttca cggcgtttcg gcgcgcccat gcggcccact
    23701 tcgccggtag agtacggcgg aaagttgtag tgcagcataa agcggtcggt atattcgccg
    23761 gacaacgcgt cgatgatttg ttcgtcgcgc gaagtaccca aagtcgctac ggcaagggct
    23821 tgggtttcgc cacgggtaaa cagtgcggaa ccgtgcgtgc gcggcaatac gccggtttgg
    23881 atgttcagcg gacggacggt gcgggtgtcg cggccgtcga tgcgcggttg tccgtccaaa
    23941 atttggctgc ggacgacatc ggcttccaag tgtttgaaaa tacctttgat ttcgttggct
    24001 gccagcgtgt cggtttcttc ggtaatcaag gcttctttta ccgcattcca agcctcgtcc
    24061 aatttggcgg aacgcgcttg tttttgacgg attttgaacg cttctttaat ggtttcgccg
    24121 gcaatcccgc gtactttggc aaccagttct tcattggttt caggtgcttt ccaatcccaa
    24181 acttccggat tcacttcgtc ggcaaattca ttgattgcat tgatggcaac ctgcatttga
    24241 tcgtggccgt aaaccaccgc gcccaacatc acgtcttcgg gcaggatttt ggcttcggat
    24301 tccaccatca acacggcttt ggaagtaccg gcgaccacca agtccaattg tgatttcgcc
    24361 aactcggctt tagtcgggtt caaaacgtac acgccgttta tataacccac gcgcgccgcg
    24421 ccaatcgggc cggcgaacgg tacgccgctc aacaccagcg cggcggacgc gcccaacatt
    24481 gcaggaatgt cggaatcgat ttcgggatcg acggacacaa ccatcgctac gatttggatg
    24541 tcgtggtaga aaccttcggg gaacagcgga cgaatcgggc ggtcgatcag acggctggtc
    24601 aggatttctt tttcgctttg tttgccttcg cgtttgaaga agccgccggg gattttgcct
    24661 gcggcataag tgcgttccaa ataatcgacg gccaacggga agaagtcctg accttctttg
    24721 acctctttgt tggtggtaac ggcaacaaaa acaacagtgt cgcccatcga tactttaacg
    24781 gcagcggcag cttggcgggc aatttcgccg gtttccaaag taacggtttg attaccgtat
    24841 tggaaggtct taacgtattt attgaacatc attgttcctt tcaaaatacc gcactgctaa
    24901 aacactaata atgcacacta aaatccgaat gtgcatagtt agggtttcag accgtgcggc
    24961 aggttgtaaa caagctttca gacggcattt cggacgctga aaacaattgc ggattataaa
    25021 ggcaaccatc cttaaaatcc agtattgata caataaaaag gccgtctgaa acatatcctt
    25081 ttcagacggc cttcagtctt caaaatcaat cttgtgtcag taaagtcaat gcttcctgat
    25141 atttctcgac cgttttccga attacatcgg caggcacttt aggcgcaggg gcttttttgt
    25201 tccaaccgct ttgttccagc cagtcgcgga cgaattgttt gtcaaaagac ggcggattga
    25261 tgccgacttc atattgatcc gccggccaga agcggctcga atcgggagtc aatacctcat
    25321 ccatcagcgt cagcgtacct tcttcatcca aaccgaattc aaatttggta tcgcaaatga
    25381 tgatgccgcg cgatttggca tattccgccg cttcggtgta aagccgaacc gctttgtcgc
    25441 gcacttcttc cgccaattct ttaccgataa tgcgtccgca ttcttcaaag ctgatgtttt
    25501 catcgtgatc gccgactgcg gctttagttg agggcgtaaa aatcacttcg ggtagttgtt
    25561 gcgcttcccg cataccttcg ggcagccgaa taccgcaaac cgagccggtt ttttgataat
    25621 ctttccaacc gctgcctgcc agataaccgc gcacaatggc ctccactttc accggagtga
    25681 gttttttagc tacaacggcg cgtttttcca aagctttggc ttcgttttca ggcaaaacat
    25741 cgtacacggt atcgccggtg aaatggttgg gcataatatg cgccagtttt ttaaaccaaa
    25801 aattggaaat ctgcgtcagg atttcgccct tacccggaat cggggcgtcc aaaatcacat
    25861 caaacgcgga caggcggtcg gaagcgacca tcagcatacg tttatcgtcg atttcatata
    25921 aatcgcgcac ttttccggaa taaatcttta ccaaaccaat ctcactcatt tcgcaccccc
    25981 ctgaaaatat cttgaaaata ccgacccgac aggtttgaat cgcaaaccga tattctagcc
    26041 gaagtcggcg caaaacaata cccatggcac aaaaagccaa cccgtcaacc gtcggcaaag
    26101 ttttggcact ataataccga cagcaagtcc tacaatacac tttcaccaaa ggaaatacct
    26161 catgagaatc ctattgacag gctcgaaaag ccaactggca cactgcctgc gcgaccgtct
    26221 tcctgaagac tgggaaacca ttgcgacgga ttccgcatcc ctagacatta ccgatgccga
    26281 tgccgtctgc aacatggtca aaagtttcca acccgacgct attgtcaaca cggctgccta
    26341 tactgccgtc gacaaagcgg aaggcgatgc ggcagcggca tttgccgtca atgcttccgc
    26401 cgtttacaac cttgccttgg cagcacatcg cgcccatgcc cgattcatcc acatctcaac
    26461 cgactatgtc tttgacggaa aagggaaaat accccatcag gaaagcgact ttaccaaccc
    26521 ttccaatgta tacggacaat ccaaaaccgc cggcgaactg ctcgcactgt ctgccaatcc
    26581 cgacagcctt atcctgcgga cttcttggct gtttagcgaa tacggggaca actttgtccg
    26641 cacgatgctg aaccttgcgc gggaacgttc cccgctgtcc gccgtccaca accaaatcgg
    26701 ctgcccgacc tatgccggcg acttgtccgc cgccatcatc cgcctgttgc agcagtccaa
    26761 tcccgttcgc ggcatttacc actacgccgg cggcaaatcc gtatcctggt acgaatttgc
    26821 ccggcacatc tttcagacgg cattgcaaca ggatgcctct tttcccgttc ccgaactgaa
    26881 agccgtttcg gatgaaggct ctgcggctgc cgcccccagg cccgcataca gcattttgga
    26941 ctgccgcaaa atcgaaaacg acttcggcat caaaccgtca gactggcaaa aagcccttgc
    27001 acaggtcgtt tccaagctgc tctgatgccg cccgcccctc cgtttcctcc gccaagcacc
    27061 gccttggcgg ttttcttata aaatctactg attacacaaa cacatatcat ctttacacaa
    27121 tcatgcttcc atcaacag
//
LOCUS       DAXFZM010000017        25131 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.017, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000017 DAXFZM010000000
VERSION     DAXFZM010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 25131)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25131)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25131
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.017"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..1555)
                     /locus_tag="ACFJAG_000637"
     CDS             complement(<1..1555)
                     /locus_tag="ACFJAG_000637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E/G"
                     /protein_id="HFC3980000.1"
                     /translation="MKRMLFNATQAEELRVAIVDGQNLLDLDIETLGKEQRKGNIYKG
                     IITRIEPSLEACFVDYGTDRHGFLPFKEVSRSYFLGYEGGRARIQDVLKEGMEVIVQV
                     EKDERGNKGAALTTFISLAGRYLVLMPNNPRGGGVSRRIEGEERQELKAAMAQLDIPN
                     GMSIIARTAGIGRSAEELEWDLNYLKQLWQAIEEAGKAHHDPYLLFMESSLLIRAIRD
                     YFRPDIGEILVDNQEVYDQVAEFMSYVMPGNAGRLKLYEDHTPLFSRFQIEHQIESAF
                     SRSVSLPSGGAIVIDHTEALVSIDVNSARATRGADIEDTAFKTNMEAAEEVARQMRLR
                     DLGGLVVIDFIDMENPKHQRDVENVLRDALKKDRARVQMGKLSRFGLLELSRQRLKPA
                     LGESSHAACPRCAGTGVIRGIESTALHVLRMVQEEAMKDNTGEVRAQVPVDVATFLLN
                     EKRAELFAMEERLDVNVVLIPNIHLENPHYEINRIRTDDVEEDGEPSYKRVAEPEEDE
                     SAKPFGGEKA"
     gene            2048..3040
                     /locus_tag="ACFJAG_000638"
     CDS             2048..3040
                     /locus_tag="ACFJAG_000638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HFC3980001.1"
                     /translation="MKTHEISKGSVSLIGVAEHEAGQRLDNYLIKILKGVPKGYIHRI
                     IRAGEVRLNKKRCKPDSRIAEGDTVRIPPVRVAEKEMPSERRAAVPARAFEVVYEDDA
                     LLVVNKPSGVAVHGGSGVGFGVIEQLRRARPEAKYLELVHRLDKDTSGLLMVAKKRSA
                     LVKLHEAIRNDHPKKIYLALGVGKLPDDNFHVKLPLFKYTGAQGEKMVRVSEDGQSAH
                     TVFRVLSRFSDGILHGVGLSHLTLVRATLKTGRTHQIRVHLQSQGCPIAGDERYGDYQ
                     ANRRLQKLGLKRMFLHASELHLNHPLTGEPLVLKAEPPPDLAQFAVMLENGTKM"
     gene            3191..4363
                     /gene="lpxB"
                     /locus_tag="ACFJAG_000639"
     CDS             3191..4363
                     /gene="lpxB"
                     /locus_tag="ACFJAG_000639"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008915 - lipid-A-disaccharide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HFC3980002.1"
                     /translation="MWGQTNMVDKKSPLIAVSVGEASGDLLGAHLIRAIRKRCPQARL
                     TGIGGELMKAEGFESLYDQERLAVRGFVEVVRRLPEILRIRRELVRDLLSLKPDVFVG
                     IDAPDFNLGVAEKLKRAGIPTLHYVSPSVWAWRRERVGKIVHQVNRVLCLFPMEPQLY
                     LDAGGRAEFVGHPMAQLMPLEDDRETARKTLGADVGIPVFALLPGSRVSEIDYMAPVF
                     FQTALLLLERYPAARFLLPAATEATKRRLAEVLQRPEFAGLALTVTDRQSETVCRAAD
                     AVLVTSGTATLEVALCKRPMVISYKISPLTYAYVKRKIKVPHVGLPNILLGKEAVPEL
                     LQSEAKPEKLAAALADWYEHPDKVAALQQDFGALHLLLKKDTADLAARAVLEEAGC"
     gene            4371..4529
                     /locus_tag="ACFJAG_000640"
     CDS             4371..4529
                     /locus_tag="ACFJAG_000640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980003.1"
                     /translation="MDYFPEAARITKKGGEIVINGTSNNKYLRGIPNETELARMGLRL
                     KYNGSLTD"
     gene            4620..4889
                     /locus_tag="ACFJAG_000641"
                     /pseudo
     CDS             4620..4889
                     /locus_tag="ACFJAG_000641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215525.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(5003..5812)
                     /gene="dapB"
                     /locus_tag="ACFJAG_000642"
     CDS             complement(5003..5812)
                     /gene="dapB"
                     /locus_tag="ACFJAG_000642"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008839 - 4-hydroxy-tetrahydrodipicolinate
                     reductase [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HFC3980004.1"
                     /translation="MIPLKIAIAGANGRMGRVLVEAVNNHPDTVLSGALEHSGSEALG
                     LDAGYAVGLKTGIAISDDVDAVLAQSDVLIDFTRPEPTLKHLQKCVEKQVNIIIGTTG
                     FDDAGKAAIRAAAEKTGIVFAANFSVGVNLTFHILDTVARVLNEGYDIEIIEGHHRHK
                     VDAPSGTALRMGEVIAGALGRDLKQCAVYGREGHTGPRDPSTIGFATVRAGDIVGDHT
                     ALFATDGERVEITHKAGSRMTFAAGAVRAAVWVNGKTGLYDMQDVLGLNNR"
     gene            complement(5822..6199)
                     /locus_tag="ACFJAG_000643"
     CDS             complement(5822..6199)
                     /locus_tag="ACFJAG_000643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HFC3980005.1"
                     /translation="MNKTLILALSALFSLTACSVERVSLFPSYKLKIIQGNELEPRAV
                     AALRPGMTKDQVLLLLGSPILRDAFHTDRWDYTFNTSRNGIIKERSNLTVYFENGVLV
                     RTEGDALQNAAEALRAKQNADKQ"
     gene            6426..6860
                     /gene="fur"
                     /locus_tag="ACFJAG_000644"
     CDS             6426..6860
                     /gene="fur"
                     /locus_tag="ACFJAG_000644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferric iron uptake transcriptional regulator"
                     /protein_id="HFC3980006.1"
                     /translation="MEKFSNIAQLKDSGLKVTGPRLKILDLFEKHAEEHLSAEDVYRI
                     LLEEGVEIGVATIYRVLTQFEQAGILQRHHFETGKAVYELDKGDHHDHIVCVKCGEVT
                     EFHNPEIEALQDKIAEENGYRIVDHALYMYGVCSDCQAKGKR"
     gene            6930..7655
                     /gene="aat"
                     /locus_tag="ACFJAG_000645"
     CDS             6930..7655
                     /gene="aat"
                     /locus_tag="ACFJAG_000645"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008914 - leucyl-tRNA--protein transferase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HFC3980007.1"
                     /translation="MRIPLLAPDNYAFPDPAYALARCDGLVGVSRDLDAGRLLEAYRN
                     GVFPWFSRDGWFFWYAVGPRAVIVPERLHVPRSLAKTLRNGSYRVAVNGCFAEVVAHC
                     AAAARPNQDGTWIAPEFQTAYLKLHEMGHAHSFECHYPDENGKTRLAGGFYGVQIGRV
                     FYGESMFALQPDASKIAFACAVPFLADLGVELIDCQQDTEHMRRFGSELLPFADFAER
                     LRMLNAVPLKEEIGRREVACKGL"
     gene            complement(7910..8941)
                     /gene="gap"
                     /locus_tag="ACFJAG_000646"
     CDS             complement(7910..8941)
                     /gene="gap"
                     /locus_tag="ACFJAG_000646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0006006 - glucose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HFC3980008.1"
                     /translation="MGIKVAINGYGRIGRQVLRAIYDYQIQDQLQIVAVNASGSLETN
                     AHLTKFDTVHGRFEADVSHDGGNLIVNGDKIPFFSTRNPAELPWKELGVDLVMECTGA
                     FTSKEKAKIHLESGAKKVLISAPGGDDVDATVVYGVNDSVLTADMTVVSNASCTTNCL
                     SPVAKVLSESVGIVKGAMTTIHALTNDQTVTDVRHKDLRRARSGVENMIPTKTGAAKA
                     VGLVLPELKGRLDGLAIRVPTVNVSLVDLSFQAARDTTVEEINALMKAASEAGALKGV
                     LGYNTLPLVSMDFNHTTEASHFDATLTKVVDGNMVKVFAWYDNEWGFSCQMLNTARRM
                     FGLEVRPLK"
     gene            complement(9140..9979)
                     /locus_tag="ACFJAG_000647"
     CDS             complement(9140..9979)
                     /locus_tag="ACFJAG_000647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RnfABCDGE type electron transport complex
                     subunit B"
                     /protein_id="HFC3980009.1"
                     /translation="MTATAADLDRLLPQTQCRECGYEGCLPYARAMLRGEAHNLCAPG
                     GATVVRDLAALLGKPLVAPAKTQAKALARIDETACIGCTACIRACPADAIMGAGKLMH
                     TVITDECTGCGLCVAPCPVDCIHMQPVADTVLPRARRFSLSDDSRFAAAEHARARYLK
                     RNERKQREADERKAMLAEREAAVRNARPQTPDTPKKPAFNPADLIAKAMAKAQTQQDR
                     LAAADNRQGYQAKQIAEARERAELRRAQRDMKYGSDSEKAAALEYLKQYKAKQEAAQN
                     TAS"
     gene            10125..12101
                     /locus_tag="ACFJAG_000648"
     CDS             10125..12101
                     /locus_tag="ACFJAG_000648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HFC3980010.1"
                     /translation="MNEFSLAPIVVVLLVSVITVILCRKFNIPSMLGYLLVGFLAGPG
                     MLSLIPKSHATDYLGEIGIVFLMFSIGLEFSLPKLRAMRRLVFGLGGLQVGVTMLSVM
                     GILMLTGVPFNWAFAVSGALAMSSTAIVSRILSEKTELGQPHGQMAMGVLLMQDIAVV
                     PLMILIPALAGGGDGNIWAALGLAFAKMLLTLGLLFFVGSKIMSRWFRMVAKRKSSEL
                     FMINVLLVTLGVAYLTELEGLSMALGAFVAGMLLSETEYRFQVEDDIRPFRDILLGFF
                     FITVGMKLDIQALIGGWRQVLMLLAMLLVLKALVVFAIAFKMKHSVGDSLKTALYLAQ
                     GGEFGFVMLAIAGQLDMVSPELEQAATAAVLLSMIIAPFLLGGSDALVGRLVKSSWDM
                     KSLDLHSMLVEAMSKSDHVLIVGFGRGGQTVGRVLAQEDIPYFALDLDIARVQVARSA
                     GEPVSFGDAKRREVLEAAGLGRAKMVVVTLNNMHETQHVLDNVLSMHPNMPVYARATN
                     DDYVKTFTDMGAEEAVSDTKETGLVLAGYAMLGNGASYRHVYQTMANIRHSRYAALEG
                     LFVGSDDEAGFGENGETVRHAFPLAAEAYAVGKTVGTLPMAAYGIKLLFVRRRTGRIE
                     NPDASFTLEGGDVLVVAGKKKEIISFENWSLQGI"
     gene            12171..12246
                     /locus_tag="ACFJAG_000649"
     tRNA            12171..12246
                     /locus_tag="ACFJAG_000649"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:12204..12206,aa:Val,seq:tac)
     gene            12279..12355
                     /locus_tag="ACFJAG_000650"
     tRNA            12279..12355
                     /locus_tag="ACFJAG_000650"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:12313..12315,aa:Asp,seq:gtc)
     gene            12395..12470
                     /locus_tag="ACFJAG_000651"
     tRNA            12395..12470
                     /locus_tag="ACFJAG_000651"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:12428..12430,aa:Val,seq:tac)
     gene            12503..12579
                     /locus_tag="ACFJAG_000652"
     tRNA            12503..12579
                     /locus_tag="ACFJAG_000652"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:12537..12539,aa:Asp,seq:gtc)
     gene            13151..13249
                     /locus_tag="ACFJAG_000653"
     CDS             13151..13249
                     /locus_tag="ACFJAG_000653"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="eamA-like transporter family protein"
                     /protein_id="HFC3980011.1"
                     /translation="MAVVFLDERPNTQEWIGLGLVTAGVLTLALKR"
     gene            complement(13320..14705)
                     /locus_tag="ACFJAG_000654"
     CDS             complement(13320..14705)
                     /locus_tag="ACFJAG_000654"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003941 - L-serine ammonia-lyase activity
                     [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HFC3980012.1"
                     /translation="MISIFDIFKIGIGPSSSHTVGPMKAAAAFAAGLDAQTARIAIDI
                     YGSLALTGYGHGTFDALMLGLEGSLPHDIPLAGIPERLGRIRTQHILRLNGQEIRFIP
                     DRDLNIRGNQVLPKHPNGLRFTAYASDGTVLKEQVYYSVGGGFVVTEEDFEWQSETEK
                     AVPYPYNSCAGLLARCRLNRLDISEVVLANEAALAGCGEAEIRRRVAAVAEVMEGCIK
                     RGLGADGELPGGLNVRRRAPQLAAKLKVLRETEIVNTQLWPMVYAMAVNEENAAGGRV
                     VTAPTNGAAGIIPAVLHYFRKFNPHATQERVENFLLTAGAIGILYKTNASISGADVGC
                     QGEVGVACSMAAGAYAEVIGGTPKQVENAAEMAMEHHLGLTCDPVGGLVQIPCIERNG
                     IAAEKALKLGTLALLEDGTDKKVSLDEVIRTMLQTGRDMKATYKETSLAGLAATLRKK
                     AVPVSVRVVEC"
     gene            complement(14804..17194)
                     /gene="gyrB"
                     /locus_tag="ACFJAG_000655"
     CDS             complement(14804..17194)
                     /gene="gyrB"
                     /locus_tag="ACFJAG_000655"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004283954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005694 - chromosome [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HFC3980013.1"
                     /translation="MTEQKHEEYGADSIQVLEGLEAVRKRPGMYIGDTQDGSGLHHMV
                     FEVLDNAIDEALAGHCDKITVTIHADHSVSVADNGRGMPTGIHPKEGRSAAEVIMTVL
                     HAGGKFDNNSYKISGGLHGVGVSVVNALSDWVTLTIYRDGKEHFVRFVRGETEEPLKI
                     VGDSDKKGTTVRFLAGTETFGNIEYSFDILAKRIRELSFLNNGVDIELTDERDGKHES
                     FALSGGVAGFVQYMNRKKTPLHEKIFYAFGEKDGMSVECAMQWNDSYQESVQCFTNNI
                     PQRDGGTHLTALRQVMTRTINSYIEANEVAKKAKVETAGDDMREGLTCVLSVKLPDPK
                     FSSQTKDKLVSGEIGPVVNEVINQALTDFLEENPNEAKIITGKIVDAARAREAARKAR
                     EITRRKGVMDGLGLPGKLADCQEKDPALSELYLVEGDSAGGSAMQGRDRKFQAILPLK
                     GKILNVEKARFEKMLASQEVATLITALGAGIGKEEFNPEKLRYHRIIIMTDADVDGAH
                     IRTLLLTFFYRQMPELVERGYIYIAQPPLYKAKYGKQERYLKDELEKDQWLLGLALEK
                     AKIVSDGRTIEGAELADTAKQFLLAKTVIEQESRFVDELVLRAMLHASPIDLTSSENA
                     DKAVAELSGLLDEKEAALERIEGHEGHRFIKITRKLHGNVMVSYIEPKFLNSKAYQTL
                     TQTAAALKGLVGEGAKLYKGENEYDADSFETALDILMSVAQKGMSIQRYKGLGEMNPE
                     QLWETTMDPAVRRLLKVRIEDAIAADEVFVTLMGDEVEPRRAFIENNALIAQNIDA"
     gene            17460..18332
                     /locus_tag="ACFJAG_000656"
     CDS             17460..18332
                     /locus_tag="ACFJAG_000656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel domain-containing
                     protein"
                     /protein_id="HFC3980014.1"
                     /translation="MEIWNMLNTWPDAVPIRAEAAESVAAVAALLLARALLLNIHFRR
                     HPDFGIESKRRFLVASRNITLLLVLFSLAFIWSAQIQTLALSMFAVAAAVVVATKELI
                     MCLSGSILRSATQQYSVGDYIEINGLRGRVVDINLLNTLMMQVGPNPLVGQLAGTTVS
                     FPNSLLLSHPVRRDNILGDYVIHTVEIPVPIHLDSDEAVCRLKAVLEPLCAPYIPAIQ
                     RYLENVQAEKLFITPAARPRVTRVPYDDKAYRIIVRFASPVSKRLEIQQAVMDEFLRV
                     QYRLLNHPAGSETL"
     gene            18420..20456
                     /locus_tag="ACFJAG_000657"
     CDS             18420..20456
                     /locus_tag="ACFJAG_000657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family metallopeptidase"
                     /protein_id="HFC3980015.1"
                     /translation="MIDNALLHLGEEPRFNQIKTEDIKPAVQTAIAEARGQIAAVKAQ
                     THTGWANTVERLTGITERVGRIWGVVSHLNSVVDTPELRAVYNELMPEITVFFTEIGQ
                     DIELYNRFKTIKNSPEFATLSPAQKTKLDHDLRDFVLSGAELPPEQQAELAKLQTEGA
                     QLSAKFSQNVLDATDAFGIYFDDAAPLAGIPEDALAMFAAAAQSEGKTGYKIGLQIPH
                     YLAVIQYAGNRELREQIYRAYVTRASELSNDGKFDNTANIDRTLENALKTAKLLGFKN
                     YAELSLATKMADTPEQVLNFLHDLARRAKPYAEKDLAEVKAFAREHLGLADPQPWDLS
                     YAGEKLREAKYAFSETEVKKYFPVGKVLNGLFAQIKKLYGIGFAEKTVPVWHKDVRYF
                     ELEQNGKTIGGVYMDLYAREGKRGGAWMNDYKGRRRFADGTLQLPTAYLVCNFAPPVG
                     GKEARLSHDEILTLFHETGHGLHHLLTQVDELGVSGINGVEWDAVELPSQFMENFVWE
                     YNVLAQMSAHEETGEPLPKELFDKMLAAKNFQRGMFLVRQMEFALFDMTIYSEDNEGR
                     LKNWQQVLDSVRKEVAVIQPPEYNRFANSFGHIFAGGYSAGYYSYAWAEVLSADAYAA
                     FEESDDVAATGKRFWQEILAVGGSRSAAESFKAFRGREPSIDALLRHSGFDNAA"
     gene            complement(21037..22200)
                     /locus_tag="ACFJAG_000658"
     CDS             complement(21037..22200)
                     /locus_tag="ACFJAG_000658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c peroxidase"
                     /protein_id="HFC3980016.1"
                     /translation="MSFKLRYLASVLALSSLLAACGGQEKSAAGDASPASETEAASQV
                     QASEAVPSASSASPEDQDLLKRAQGVFQPLPTVEEMQKIRPFTEEQVKLGHQLWYEPR
                     LSKGNTVSCNSCHNLASAGVDNMPTSQGHKGQFGGRNSPTALNAALLGSQFWDGRAAD
                     VEEQAGGPLVNPVEMANDSQEAAAAKIAKVPEYQEMFKKAFPEDGAVSFKNITTALGA
                     FERTLLTPTKWDEYLKGNVNALSEQERKGVRAFMDNGCIACHNGVNLGGTTFQKFGLV
                     QGPYWKFIEDPKRDKGRADVTKKTEDEFFFRVPGLRNVAKTYPYFHNGSVWELDKAVT
                     IMGKAQLGKDIPKEDVDNIVVFLNALSGNVSESARTMPELPLTAPMESKPDNK"
     gene            complement(22422..22988)
                     /locus_tag="ACFJAG_000659"
     CDS             complement(22422..22988)
                     /locus_tag="ACFJAG_000659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese efflux pump MntP family protein"
                     /protein_id="HFC3980017.1"
                     /translation="MSLYALLLVALGMSMDAFAVALAKGAAVRMPPRKIAATALVFGT
                     VEAFMPLAGWVGGFYAKPFISEWDHWVAFVLLGGLGLKMMREGLSGEAEDVRESKQES
                     LWMTVLTAFGTSIDSMIVGVGLAFMEVNIAFAAAVIGMAATVMVTIGLTAGKAFGVLF
                     GRRAEFAGGLVLIAIGTWTLLSHLGLIQ"
     gene            complement(23503..25017)
                     /gene="katA"
                     /locus_tag="ACFJAG_000660"
     CDS             complement(23503..25017)
                     /gene="katA"
                     /locus_tag="ACFJAG_000660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase KatA"
                     /protein_id="HFC3980018.1"
                     /translation="MTTSKCPVTHLTMNNGAPVADNQNSLTAGPRGPLLTQDLWLNEK
                     LADFVREVIPERRMHAKGSGAFGTFTVTHDITKYTRAKIFSEVGKKTEMFARFTTVAG
                     ERGAADAERDIRGFALKFYTEEGNWDVVGNNTPVFFLRDPRKFPDLNKAVKRDPRTNM
                     RSATNNWDFWTLLPEALHQVTIVMSDRGIPASYRHMHGFGSHTYSFWNEAGERFWVKF
                     HFRSQQGIKNLTNEEAAKIIADDRESHQRDLYEAIERGEFPKWTMYIQVMPEADAEKV
                     PYHPFDLTKVWPKKDYPLIEVGEFELNRNPENFFADVEQSAFAPSNLVPGIGASPDKM
                     LQARLFNYADAQRYRLGVNFRQIPVNRPRCPVHSNQRDGQGRADGNYGSLPHYEPNSF
                     GQWQQQPDFAEPPLKINGDAAHWDYRQDDDDYFSQPRALFNLMNDAQKQALFDNTAAA
                     MGDAPDFIKYRHIRNCYRCDPAYGEGVAKALGLTVEDAQAARATDPALGQAGLL"
BASE COUNT         5169 a         6378 c         7536 g         6048 t
ORIGIN      
        1 tggctttttc gccgccgaaa ggtttggcgg attcgtcttc ttcaggctcg gcaacgcgct
       61 tgtagctcgg ttcgccgtct tcttctacgt cgtcggtgcg gatgcggttg atttcgtagt
      121 gcggattttc gaggtggatg ttcggaatca ggacgacgtt cacatccaaa cgctcttcca
      181 ttgcaaacag ctcggcgcgt ttttcgttca gcaggaaggt ggcgacatcg acgggcactt
      241 gggcgcgcac ttcgccggtg ttgtccttca tcgcttcttc ctgaaccatg cgcaaaacgt
      301 gcagggcggt ggattcgatg ccgcggatca cgccggtgcc ggcgcagcgc ggacaggcgg
      361 cgtggctgct ttcgcccaaa gcgggtttca ggcgttggcg gctcaattcc aaaagtccga
      421 aacgggagag tttgcccatc tgtacgcggg cgcggtcttt tttgagtgcg tcgcgcagga
      481 cgttttccac atcgcgctgg tgtttggggt tttccatgtc gatgaagtcg atgacgacca
      541 agccgcccaa gtcgcgcagg cgcatttgtc gggcgacttc ttcggcagct tccatattgg
      601 ttttgaaggc ggtgtcttcg atgtccgcgc cgcgtgtggc gcgtgcggag ttcacgtcga
      661 tggagacgag ggcttcggtg tggtcgatga cgatcgcgcc gccggagggc aggctgacgc
      721 tgcgcgagaa cgcgctttcg atctggtgtt cgatttggaa gcgggaaaac agcggcgtgt
      781 ggtcttcgta gagtttcaga cgacctgcgt tgcccggcat gacgtagctc atgaactcgg
      841 caacttggtc gtaaacttct tgattgtcca ccaaaatttc gccgatgtcg ggacggaagt
      901 agtcgcggat ggcgcggatg agcaacgagc tttccataaa gagcaggtag gggtcgtgat
      961 gcgcttttcc tgcttcttcg attgcctgcc agagttgttt gaggtagttc aaatcccatt
     1021 ccaactcttc cgcgctgcgg ccgatgccgg cggtacgcgc gatgatgctc atgccgttcg
     1081 gaatgtcgag ttgcgccatc gcggctttga gttcttgacg ctcttcgcct tcgatacggc
     1141 gggatacgcc gccgccgcgc ggattgttcg gcatcaatac cagatagcgt ccggcgaggc
     1201 tgatgaaggt ggtcagcgcc gcgcctttgt tgccgcgctc gtctttttcg acttggacga
     1261 tgacttccat gccttctttg agcacgtcct gaatgcgcgc gcgcccgcct tcgtagccga
     1321 ggaaatacga acgcgatact tctttaaacg gcaaaaagcc gtggcggtcg gttccgtaat
     1381 cgacgaaaca cgcttccagc gacggctcga tgcgggtaat gatgcctttg tagatattgc
     1441 ctttgcgctg ttctttgccc agcgtttcga tgtccaaatc cagcaggttt tgtccgtcga
     1501 cgatggcaac gcgcagctct tcggcctgcg ttgcgttgaa taacattctt ttcatgatca
     1561 cctcgtggac gggcggcatt cgggcgcgcc ggtccggttc ggcattccgt aaggctgggt
     1621 ttccgatgtc ttcggataaa accggtaatc agtttttgag ttgaaaatcc gcagggatgc
     1681 acgttccggg aaaccgtgtg cggaagggtc ggataaagaa ggctataaag atcgatgcgg
     1741 cggtctgcct gccgcgttcc gaacgctgcg gtcggaaaaa tgggcgccgg cttcttcttg
     1801 ttatcgtgat gcctgtgttt tcgggcggtt tgcgttcggg gcttggggct ccgctgccgt
     1861 cttacttccg cgccgaaacg gcaaaatcaa ttcaaacttg actacgttct gcgcctgccg
     1921 gctgggaaca ggcgcaggga aaatgctttg cggagtgcgt ttttaatata aaattccgtt
     1981 ttaaagtaaa ccgtttcagg gggcgcggcg gacgcgcttt ctgctgaaac ggatgttcgg
     2041 attatagatg aaaacgcacg aaataagcaa aggttcggtc agcctgatag gggttgccga
     2101 acatgaggcg ggtcaacgcc ttgataacta tctgataaaa atcctcaagg gcgtgcccaa
     2161 gggctatatc caccgcatta tccgcgccgg cgaggtgcgg ttgaacaaga aacgctgcaa
     2221 acccgacagc cgtattgcgg agggagatac ggtgcggatt ccgcctgtgc gcgtggcgga
     2281 gaaggaaatg ccgtctgaaa ggcgtgccgc cgtaccggcg cgtgcgtttg aggtggtgta
     2341 tgaggacgac gcgctactgg tggtcaataa gccttccggt gtggcggtac acggtggcag
     2401 cggcgtgggt ttcggcgtta tcgaacagtt gcgccgcgcc cgtccggagg cgaagtattt
     2461 ggagttggtc caccgtttgg acaaggatac gagcggcttg ttgatggtgg cgaagaaacg
     2521 cagcgcgctc gtcaaactgc acgaagctat ccgtaacgac caccccaaaa aaatctacct
     2581 tgcgctgggg gtgggcaaac tgccggacga caatttccat gtcaaactgc ccctgttcaa
     2641 atataccggc gcacaaggcg aaaagatggt acgcgtcagc gaggacgggc agtcggcgca
     2701 tacggtgttc cgtgtgttaa gccgtttctc agacggcatt ttgcacggtg tcgggctgtc
     2761 gcacctgact ttggtgcggg caacgctgaa aacgggccgt acgcaccaaa tccgcgtgca
     2821 tctgcaatct caaggctgtc cgattgcggg cgacgaacgc tacggcgatt atcaggcgaa
     2881 ccggcgtttg cagaaattgg gtttgaagcg catgtttttg cacgcgtccg agctgcacct
     2941 gaaccatccg ctcacgggtg agccgctggt gttgaaggcg gagccgccgc cggatttggc
     3001 gcagtttgcg gtgatgttgg aaaacgggac gaaaatgtga accccgatgc cgtctgaagg
     3061 cttcagacgg catcggggcg tgaaagtata gtggattaac aaaaatcagg acaaggcgac
     3121 gaagccgcag acagtacaga tagtacggca aggcgaggca acgccgtacc ggtttttgtt
     3181 aatccactat atgtggggac agacgaatat ggttgataaa aaaagccctt tgattgccgt
     3241 cagtgtcggc gaagcgtcgg gcgacctgtt gggggcgcac ctgatacgcg ccatccgaaa
     3301 gcgttgcccg caggcacggt taaccggcat cggcggggaa ctgatgaagg cggaaggttt
     3361 cgagagcctt tatgatcagg agcggctggc ggtgcgcggc tttgtcgaag tggtcaggcg
     3421 gctgccggaa attttacgga tacgcaggga gctggtacgg gatttgctgt cgttgaaacc
     3481 tgatgtcttt gtcggtatcg atgcgcccga ttttaatctg ggtgtggcgg aaaagctgaa
     3541 acgggcgggc attccgaccc tgcattatgt cagtccgtcg gtttgggcgt ggcggcgcga
     3601 acgcgtgggc aaaatcgtgc atcaggtcaa ccgcgtgctg tgcctgttcc cgatggagcc
     3661 gcagctttat ctcgatgcgg gcggacgtgc ggagtttgtc ggtcatccga tggcacagct
     3721 tatgcccttg gaagacgacc gtgaaacggc gcggaaaact ttgggcgcgg atgtcggcat
     3781 ccccgtattc gccctgctgc ccggcagccg cgtcagcgaa atcgactata tggcgccggt
     3841 gttttttcag acggcattat tgttgttgga acgctatccc gccgcccgct tcctgctgcc
     3901 tgccgcaacg gaggcgacga agcggcgttt ggcggaagtt ttgcagcggc cggagtttgc
     3961 cggattggcg ctgacggtaa ccgacagaca gtctgaaacg gtgtgcaggg cggcggatgc
     4021 ggtgctggta acgagcggta cggcgacttt ggaggtggcg ttgtgcaagc gtccgatggt
     4081 catcagctac aagatttcgc cgctgaccta tgcttatgtg aaacgcaaaa tcaaagtgcc
     4141 gcatgtcggc ctgccgaata tcctgttggg taaggaggcc gtgccggaat tattgcaatc
     4201 tgaagcaaaa ccggaaaaac tggcggcggc attggcggac tggtacgaac accccgataa
     4261 ggttgccgcg ctgcaacagg atttcggggc gttgcacctg ctgttgaaaa aagatacggc
     4321 ggatttggcc gcgcgcgcgg ttttggaaga ggcgggatgt tgagcggtta atggattatt
     4381 ttcccgaagc agcacgtatt acaaaaaaag ggggagaaat tgtgattaat ggcacatcaa
     4441 acaataagta tttaagagga attccaaatg aaacagaact ggcccgaatg ggattaaggt
     4501 taaaatataa tggttcgtta actgattaat tttattatat atgattatag tttatactaa
     4561 tacgcttacg taccttgttt catttgttct tcgtaaattt ctattttagg caattgtgtc
     4621 ctacaccaaa ttacacagac tgggtaaaaa ttaaattcaa gcagttcagc tatctgaaat
     4681 ttatctatgg atacgctacg gagaaccaag ataaagatat cgataatacc ttggagcttg
     4741 gagaattaaa gcaggatgat gaaatcttgg attatggagg tgcactggca ttaatagggc
     4801 gtaggtataa tcttccgacc agttttatca tagatatagt ttgccgggaa atagagttgg
     4861 aatttttaga tcaggagagt ttcaattaaa cgagccgtag cttgtcatgc tgcacaagca
     4921 actttattga tatgccgata cgaagcctgt cggcaaaatg ccgtctgaac aatatctttt
     4981 cagacggcat tttgtatggg ggttaacggt tgttcagccc gagtacgtcc tgcatatcgt
     5041 acaaacccgt tttgccgttt acccaaactg cggcgcggac ggcaccggcg gcaaaggtca
     5101 tgcggctgcc ggctttgtgg gtgatttcca cgcgttcgcc gtcggtggcg aagagggcgg
     5161 tgtggtcgcc gactatgtcg cctgcgcgga cggtggcaaa gccgatggtg gaaggatcgc
     5221 gcggaccagt gtggccttcg cggccgtaaa cggcgcattg tttgaggtcg cggccgagcg
     5281 cgccggcgat gacttcgccc attcgtaatg ctgtgccgct gggggcatcg actttgtggc
     5341 ggtggtggcc ttcgatgatt tcgatgtcgt agccttcgtt gaggacgcgg gcgacggtgt
     5401 cgaggatgtg gaaggtgagg ttgacgccga cgctgaagtt ggcggcgaaa acgatgcctg
     5461 ttttttcggc ggcggcgcgg atggcggctt tgcccgcatc gtcgaagcct gttgtgccga
     5521 tgatgatgtt gacttgtttt tcaacgcatt tttgcaggtg cttgagggtc ggctcggggc
     5581 gggtgaagtc gatgagtacg tcgctttggg cgagaacggc gtcaacgtcg tctgaaatgg
     5641 cgatgccggt tttgagtccg acggcgtagc ccgcgtccag cccgagggct tctgagcctg
     5701 agtgttcgag cgcgccggaa aggacggtgt cgggatggtt gttgacggct tcgacgagga
     5761 cgcgtcccat gcggccgttt gcgccggcga tggcgatttt gagcggtatc atgtgtgttc
     5821 cttattgttt gtctgcgttt tgtttcgcgc ggagggcttc ggcggcattt tggagggcgt
     5881 cgccttcggt gcggacgagt acgccgtttt caaaatagac ggtcaggttg ctgcgttctt
     5941 tgatgatgcc gttgcgggag gtgttgaagg tatagtccca gcggtcggta tggaaagcgt
     6001 cgcgcagtat ggggctgccg agcaggagca ggacttggtc tttggtcatg ccggggcgca
     6061 gggcggcaac ggcgcgcggt tcgagttcgt tgccttggat gattttgagt ttgtaggagg
     6121 gaaacagcga gacgcgttcg acgctgcacg cggtcaggct gaacagggcg gaaagggcga
     6181 ggatgagggt tttgttcacg ggagaacctt tctgtgcaaa tcgggatgtc tagtgtagca
     6241 ctgcttgaat attttataaa agcgaacgat aatcatacgc ttaagcggta ttttaccctg
     6301 tctgtgtccg actgcccgtc cgccgttgcg gttttgctat tgcgaactgc tatggtgtga
     6361 tagtgggcaa gcaggctgaa attgcgtatt atagcgtcta ttattttaca gggatattga
     6421 atattatgga aaaattcagc aacattgcgc aactgaaaga cagcggtctg aaggttaccg
     6481 gcccgcgttt gaagattttg gatttgttcg agaagcacgc ggaagagcat ttgagtgcgg
     6541 aagatgtgta ccgcattctg ctggaagagg gcgtggaaat cggtgtggcg acgatttacc
     6601 gcgtgctgac gcagttcgag caggcgggca ttctgcaacg ccaccatttt gaaacgggca
     6661 aggcggttta tgagttggac aagggcgacc accacgacca tatcgtctgc gtgaagtgcg
     6721 gcgaggtaac ggaattccac aatcccgaaa tcgaagccct gcaagacaaa atcgccgagg
     6781 aaaacggcta ccgcatcgtc gatcacgcgc tttatatgta cggcgtgtgc agcgactgtc
     6841 aggccaaggg caaacgttaa atccggacgg tttgttgttc agacggcatt catgattttg
     6901 gatgccgtct gtgtttttgg agaactgcca tgcgtattcc gctgcttgcc cctgacaatt
     6961 atgcctttcc cgatcctgcc tatgctttgg cccggtgcga cgggctggtc ggcgtgagca
     7021 gggatttgga cgcggggcgg ctgctcgagg cgtatcggaa cggcgtgttt ccttggtttt
     7081 cgcgggacgg ttggtttttt tggtatgcgg tcgggccgcg tgcggtaatt gttcccgaac
     7141 gtctgcacgt tccgcgctcg ctggcgaaaa cgctgcgtaa cggcagctat cgggttgcgg
     7201 tcaacggctg ttttgcggaa gttgtcgcgc attgtgcggc agcggcgcgc ccgaatcagg
     7261 atgggacttg gattgcgccc gagtttcaga cggcatattt gaagctgcac gaaatgggac
     7321 acgcgcattc tttcgagtgc cattatcccg atgaaaacgg taaaacgagg ttggcgggcg
     7381 gcttttacgg cgttcagatc ggcagggtgt tttatggcga atcgatgttt gcgttgcaac
     7441 cggatgcgtc gaaaatcgcg tttgcctgcg ccgtgccgtt tttggcggat ttgggcgtgg
     7501 aactgataga ctgccagcag gacacggaac atatgcgccg tttcggttcg gagctgctgc
     7561 cgtttgcgga ttttgccgaa cgtctgcgga tgttgaacgc cgtgccgttg aaagaggaaa
     7621 tcgggcggcg cgaagtggcg tgcaaggggc tttgatggcg gcttatgctt cggtcaggtt
     7681 caaatatagt ggattatagt ggattaacaa aaatcaggac aaggcggcga agccgcagac
     7741 agtacaaata gtacggcaag gcgaggcaac gccgtaccgg tttaaattta atccactata
     7801 aaattggaaa tgacgacagc cgggtaaaat cgcggtcaaa aatgaaaagt gccgtctgaa
     7861 acttgaaaac atcgggtttc agacggcatt ttgtttgacg gtttgtcgct tatttgagcg
     7921 ggcgcacttc aagtccgaac atacggcgtg cggtgttcag catttggcag ctgaagcccc
     7981 attcgttgtc ataccacgcg aacactttga ccatgttgcc gtcgacgact ttggtcagcg
     8041 ttgcgtcgaa gtggctggct tcggtggtgt ggttgaagtc catggaaacc aatggcaggg
     8101 tgttgtagcc caaaacgcct ttgagcgcgc ctgcttccga ggcggctttc atcagtgcgt
     8161 tgatttcttc gactgtggtg tcgcgcgcgg cttggaagct caaatctacc aaggatacgt
     8221 tgacggtcgg cacgcggatg gcaagcccgt cgagtctgcc tttcaattcg ggcaagacca
     8281 aaccgacggc ttttgccgcg ccggttttgg tcggaatcat gttttccacg ccgctgcggg
     8341 cgcggcgcag gtctttgtgg cgcacgtcgg taacggtttg gtcgttggtc agtgcgtgga
     8401 tggtggtcat tgcgcctttg acgatgccga cgctttcgct caacactttg gcaaccggcg
     8461 agaggcagtt ggtggtgcag gaagcgttgg aaacgacggt catgtcggcg gtcaggacgc
     8521 tgtcgttcac gccgtacacg acggttgcat cgacatcgtc gccgcccggt gcggaaatga
     8581 ggactttttt cgcgccgctt tcgaggtgga ttttggcttt ttctttgctg gtgaacgcgc
     8641 cggtgcattc catgaccaaa tcgacaccga gttctttcca cggcagttcg gcagggttgc
     8701 gggtcgagaa gaaggggatt ttgtcgccgt tgacgatgag gttgccgccg tcgtgggata
     8761 cgtcggcttc aaagcgtccg tgtacggtgt cgaatttggt cagatgggcg ttggtttcaa
     8821 ggctgccgct ggcgttgacg gcgacgattt ggagttggtc ttgaatctga tagtcgtaga
     8881 tggcgcgcaa aacctggcgg ccgatgcgtc cgtagccgtt gatggcgact ttgatgccca
     8941 tggtttgttc ctttgttgag ggttgggtag attttcgggg cggattatag caaatttgta
     9001 gtggcgtgta attaatattt tattgaaaac ggcacggccg gaagggtggg cggtaagata
     9061 cggacggcac gggtacggcg gacggagagc ttgataaaat gccgtctgaa gcggcttcag
     9121 acggcatgtc gggtaagggt caggaggcgg tattctgtgc ggcttcctgt ttggctttgt
     9181 attgtttgag gtattcgagg gcggcggctt tttcgctgtc gctgccgtat ttcatatcgc
     9241 gttgggcgcg gcgcaattcg gcgcgttcgc gggcttcggc tatctgtttt gcctgatagc
     9301 cttggcggtt gtcggcggcg gcgaggcgat cctgttgggt ttgcgctttt gccatggctt
     9361 tggcgatgag gtcggcgggg ttgaacgccg gttttttcgg tgtgtcgggc gtttgcggac
     9421 gcgcgttgcg gacggcggct tcgcgttcgg caagcatagc cttgcgttcg tcggcttcgc
     9481 gctgtttgcg ttcgttgcgt ttgaggtagc gcgcacgcgc gtgttcggcg gcggcaaaac
     9541 ggctgtcgtc ggacaggctg aaacggcgcg cgcgcggcag gacggtgtcg gcaacgggct
     9601 gcatatggat gcagtccacg gggcaggggg cgacgcagag tccgcagccg gtgcattcgt
     9661 cggtgatgac ggtgtgcata agtttgcccg cgcccataat ggcatcggca gggcaggcgc
     9721 ggatgcaggc ggtgcagccg atacaggcgg tttcgtctat ccgggcgagt gctttggctt
     9781 gggttttggc aggtgcgaca aggggtttgc cgagcagggc ggcaaggtcg cggacgacgg
     9841 ttgcgccgcc cggggcgcag aggttgtgcg cctcgccccg cagcatcgcg cgggcgtagg
     9901 gcaggcagcc ttcatagccg cattcgcggc attgggtttg ggggaggagt cggtctaaat
     9961 cggcggcggt ggcggtcatt gtgcggtggt gcgggtcaaa agggcgtatt ttatcagaat
    10021 tgtatgccgc acccgtttcg gatggtgcgc ggtgttttgt tataatacgg cggcgtatgc
    10081 cgtttcagac ggcatttttc tgtattttcc tgttcggacg gtccatgaac gaattttcgc
    10141 ttgcccctat tgtggttgtt ctgctggtgt cggtcattac ggtgatcctg tgccgcaagt
    10201 tcaacattcc ctccatgctg ggctacctgc tggtgggctt tttggcgggg cccggtatgc
    10261 tcagcctgat tccgaaaagc catgcgacgg attatttggg cgaaatcggg attgtgttcc
    10321 tgatgttcag catcggtttg gagttttcat tgcccaagct gagggcgatg aggcggctgg
    10381 tgttcggtct gggcggtttg caggtcggcg ttacgatgct gtcggtaatg ggcatactga
    10441 tgctgacggg cgtgccgttc aattgggcgt ttgccgtatc gggcgcgttg gcgatgtcgt
    10501 ccacggcgat tgtgagccgg attttgtcgg aaaagacgga gttggggcag ccgcacggtc
    10561 agatggcgat gggcgtgctg ctgatgcagg acatcgccgt cgtgccgctg atgattctga
    10621 ttcccgcgct ggctggcgga ggggacggaa atatttgggc ggccttgggt ttggcgtttg
    10681 caaaaatgct gctgacgctg gggctgctgt ttttcgtcgg cagcaaaatt atgtcgcgat
    10741 ggttcaggat ggtggcaaaa cgcaaatcgt ccgaactctt tatgatcaat gtgctgctgg
    10801 taaccttggg tgtggcttat ctgactgagc tggaaggttt gtctatggcg ttgggcgcat
    10861 tcgttgccgg catgttgctt tcggaaacgg aataccgttt ccaagtcgaa gacgacattc
    10921 gcccgttccg cgatattttg ctcggcttct tctttatcac ggtcggcatg aagctggaca
    10981 ttcaggcatt gatcggcggc tggcggcagg tattgatgct gttggcaatg ctgctggtgt
    11041 tgaaggcatt ggttgtgttt gccattgcat tcaaaatgaa gcattcggtc ggcgacagcc
    11101 tcaaaacggc tttgtatctc gcgcaaggcg gcgagttcgg cttcgtgatg ctggccattg
    11161 ccgggcagct tgatatggtt tcgccagaat tggaacaggc ggcgacggcg gcggttctgc
    11221 tgtcgatgat tatcgcgccc ttcctcttgg gcggcagcga tgcgctggtc gggcgcttgg
    11281 tcaagtcaag ctgggacatg aagtcgctcg atctgcacag catgttggtg gaagcgatga
    11341 gcaagtctga tcatgtgctg attgtcggct tcggcagggg cgggcagacg gtcggacgcg
    11401 tcctcgccca agaggatatt ccgtatttcg cgctcgactt ggacatcgca cgcgtgcagg
    11461 tagccagaag tgcaggcgag ccggtgtcgt tcggcgatgc gaaacgcagg gaagtattgg
    11521 aagccgccgg tctgggacgg gcgaaaatgg tggtggttac gctcaacaat atgcacgaaa
    11581 cgcaacacgt tttagacaat gtgctgtcca tgcatcccaa tatgcccgta tatgcgcgcg
    11641 ccaccaatga cgattatgtg aaaacgttta ccgatatggg tgcggaagaa gccgtgtcgg
    11701 acaccaaaga aaccggactc gtgctggcag gctatgcgat gttgggcaac ggcgcgtcgt
    11761 accggcacgt ctatcagacg atggcaaata tccgccacag ccgttatgcc gcgttggagg
    11821 gactgtttgt cggtagtgat gatgaggcag gattcggcga aaatggcgaa accgtccgcc
    11881 acgcctttcc tttggctgca gaagcatacg ccgtcggcaa aacagtcggc acgcttccga
    11941 tggcggctta cggcatcaaa ctcttgttcg tccgccgccg caccggccgg attgaaaacc
    12001 cggatgcctc gtttacattg gaaggcggtg acgtgttggt ggtcgcaggc aaaaaaaaag
    12061 aaattatctc ttttgaaaac tggagcttgc agggaatata aatgaaatgc cgaaataagg
    12121 cttgcgccat tcccggttat ttggtctaat agcgttttcg caaatcgcaa gggtgattag
    12181 ctcagttggt agagcgtctg ccttacaagc agaatgtcgg cggttcgact ccgtcatcac
    12241 ccaccaagtt tcctttcatt gttgcaaaca atggatgcgc ggtggtagct cagttggtta
    12301 gagtaccggc ctgtcacgcc ggtggtcgcg ggttcgagcc ccgtccgccg cgccaagttt
    12361 caaaatactg actctgtcgg tattttttat acacgggtga ttagctcagt tggtagagcg
    12421 tctgccttac aagcagaatg tcggcggttc gactccgtca tcacccacca agtttccttt
    12481 cattgttgca aacaatggat gcgcggtggt agctcagttg gttagagtac cggcctgtca
    12541 cgccggtggt cgcgggttcg agccccgtcc gccgcgccaa aagttaagaa ataccaacct
    12601 ccggttggta ttttttgttt gtacgctttg aaaaatgttt gtttccggat tttgccattc
    12661 ccatccggtt ttgcgctgta cgatgtgttt tagcgcggac ttgctcaaaa tcggatgtgg
    12721 ttccggtatt tgaggctttg attagggatg cggactttca atatattttt ctcagttaca
    12781 acaacgaagt cttgatgtct gtcgggcagg taagggagat ttttgagtgt ttcggcaaat
    12841 ataatttggt tcaaacggaa taccggcgtt ttaaggcgga taagacagaa aaccgtaatc
    12901 ataaggcaaa ttcgacattc gaatatctgc atattttaga aaagaccttt tatagtggat
    12961 taacaaaaac cggtacggcg ttgcctcgcc ttagctcaaa gagaacgatt ctctaaggtg
    13021 ctgaagcacc aagtgaatcg gttccgtact atttgtactg cctgcggctt cgtcgccttg
    13081 tcctgatttt tgttaatcca ctataaaaat tcttgccgga tgctgcaaac aacgccggtt
    13141 tgcattcctg atggcggtgg ttttcttgga cgaacgcccg aacacgcagg aatggatagg
    13201 cttggggctg gttacggcgg gcgtgttgac gttggcgttg aagcggtaaa cccgcaaaaa
    13261 ataaatgaaa tgccgtctga aaaactgttt tcagacggca ttttcgtttc tgtccatcct
    13321 cagcactcga ccacgcgcac ggatacgggg acggcttttt tccggagcgt ggcggcgagt
    13381 ccggcaagcg aggtttcttt gtaggtcgcc ttcatgtccc ggccggtttg cagcatggtt
    13441 cggatgactt cgtcgagcga gacttttttg tccgtgccgt cttccaagag cgcgagcgtg
    13501 ccgagtttga gggctttttc ggcggcgatg ccgttgcgtt cgatgcaggg gatttgcacc
    13561 aacccgccga cggggtcgca agttaagccc aaatggtgtt ccattgccat ttcggcggcg
    13621 ttttccactt gtttgggcgt gccgccgatg acttcggcgt atgcacccgc cgccattgaa
    13681 cacgctacgc cgacttcgcc ctgacaaccg acatccgcgc cggaaatgga ggcgttggtt
    13741 ttgtagagga tgccgattgc gcctgcggtg agcaggaagt tttcgacacg ttcctgtgtg
    13801 gcgtgggggt tgaacttgcg gaaataatgc aatacggcgg gaatgatgcc tgccgcgccg
    13861 ttggtcgggg cggtaacgac gcgtccgccg gcggcgtttt cttcgttgac cgccatggcg
    13921 tacaccatcg gccagagctg ggtgttgacg atttcggttt cgcgcaggac tttgagtttg
    13981 gcggcaagct gcggggcgcg gcggcggacg ttcaatccgc cgggcagttc gccgtccgca
    14041 cccaagccgc gtttgatgca gccttccata acctcggcaa cggcagcgac gcggcggcgg
    14101 atttcggctt cgccgcatcc ggcaagcgcg gcttcgtttg ccaacacgac ttcggagatg
    14161 tcgagccggt tcagacggca tcgggcaagc agcccggcac aactgttgta aggataagga
    14221 acggcttttt ccgtttccga ctgccactcg aagtcttctt cggtaacgac aaagccgccg
    14281 ccgaccgaat aataaacctg ttccttcaat accgtgccgt ctgaagcata ggcggtaaat
    14341 cgcaggccgt tggggtgttt gggcagcact tgattgccgc gtatgttcag gtcgcggtcg
    14401 gggatgaagc ggatttcttg cccgttgagc cggaggatgt gctgcgtgcg gatgcgtccg
    14461 aggcgttcgg gaatgccggc aagcgggatg tcgtgcggca ggctgccttc caaaccgagc
    14521 atcagcgcgt caaatgtgcc gtgtccgtat ccggtcaggg caagcgagcc gtaaatgtcg
    14581 atggcgatgc gggcggtttg cgcgtccaag cctgcggcaa aggcggcggc ggccttcatc
    14641 gggccgaccg tatgcgaact ggaagggccg ataccgattt tgaaaatatc aaaaatgctg
    14701 atcatggttt tgctccgaaa ggcggtttca gacggcatgg cttccgtttg acaaaccaaa
    14761 aggagacgcg gcaagctgcc cgtctccttt tttaaaacgg cacttatgcg tcgatatttt
    14821 gcgcaatcag cgcattgttt tcgataaagg cgcggcgcgg ttcgacctcg tcgcccatca
    14881 gggtaacgaa cacttcgtcg gcggcaatgg catcttcgat gcgcactttc aacaggcggc
    14941 gcacggcggg atccatcgtg gtttcccaaa gctgctcggg gttcatctcg cccaaacctt
    15001 tgtatcgttg gatggacata cctttttggg caacgctcat caagatgtcc aaagcggttt
    15061 caaagctgtc cgcgtcgtac tcgttctcgc ctttgtagag cttggcgccc tcgccgacca
    15121 agcctttgag cgcggcggcg gtttgggtga gggtttggta ggctttgctg ttgaggaact
    15181 tgggttcgat gtagctgacc atgacgttgc cgtgcagctt gcgcgtgatt ttgatgaacc
    15241 ggtgtccttc atgaccttcg atgcgttcga gggcggcttc tttttcgtca agcaaaccgg
    15301 aaagttcggc aacggcttta tcggcgtttt cagacgacgt caaatcaatg ggcgacgcgt
    15361 gcagcatggc acgcaggacg agttcgtcca cgaagcggct ttcctgttcg atgacggttt
    15421 tcgccaacaa gaattgtttg gcggtgtcgg caagttctgc gccttcgatg gtgcggccgt
    15481 ctgaaacgat tttggctttt tccaaggcaa ggccgagcag ccattggtct ttttccagtt
    15541 cgtctttgag gtaacgctcc tgcttgccgt atttggcttt gtagagcggc ggctgggcga
    15601 tgtaaatgta gccgcgctcg accagttcgg gcatttggcg gtagaagaag gtcaggagca
    15661 gggtgcggat gtgcgcaccg tccacgtcgg catcggtcat gatgatgatg cggtggtagc
    15721 gtagtttttc agggttgaac tcttctttgc cgatgcctgc acccagcgcg gtaatcaggg
    15781 tggcgacctc ttggctggcg agcatttttt caaaacgtgc tttttcgacg ttcaaaattt
    15841 tacctttgag cggcaaaatc gcttggaatt tgcggtcgcg gccctgcatg gcggaaccgc
    15901 ctgcggagtc gccctcgacg aggtagagtt cagacagggc agggtctttt tcttggcagt
    15961 cggcgagttt gccgggcagt cccaagccgt ccatcacgcc tttgcggcgg gtgatttcgc
    16021 gggctttgcg ggcggcttcg cgtgcgcggg cggcatcgac gattttgccg gtgatgattt
    16081 tggcttcgtt cggattttct tcgaggaagt cggttagtgc ttggttgatg acttcgttga
    16141 caacggggcc gatttcgccg gaaaccagtt tgtctttggt ttgggatgag aatttggggt
    16201 cgggcagttt gacggacaac acgcaggtca aaccttcgcg catatcgtcg ccggcggttt
    16261 ccactttggc ttttttggcg acttcgttag cttcgatgta gctgttgatg gtgcgcgtca
    16321 tcacttggcg cagcgcggtc aggtgcgtac cgccgtcgcg ctgagggatg ttgttggtga
    16381 agcactgcac gctttcctga tagctgtcgt tccattgcat tgcgcattcg acgctcatgc
    16441 cgtctttctc gccgaacgca tagaagattt tttcgtgcaa gggcgttttt ttgcggttca
    16501 tgtattgcac gaagcccgcc acgccgccgg aaagggcgaa gctttcgtgc ttgccgtcgc
    16561 gctcgtcggt caattcgatg tccacgccgt tgtttaggaa cgaaagttcg cgaatacgtt
    16621 tggcgaggat gtcgaagctg tattcgatat tgccgaaggt ttccgtgccg gcgaggaagc
    16681 gcacggtcgt gccttttttg tcggaatcgc cgacaatttt cagcggctct tcggtttcgc
    16741 cgcgtacgaa gcggacgaag tgttctttgc cgtcgcggta gatggtcagc gttacccagt
    16801 cggacagcgc gttgacgacg gatacgccca cgccgtgcag gccgccggag attttgtagc
    16861 tgttgttgtc gaatttgccg cccgcgtgca agacggtcat gatgacttcg gcggcggaac
    16921 gcccttcttt cgggtggatg ccggtgggca taccgcgccc gttgtcggcg acgctgacgg
    16981 aatggtcggc gtgtatcgtt accgtgattt tgtcgcaatg tccggcgagt gcttcgtcga
    17041 tggcgttgtc caatacttca aacaccatat ggtgcagccc gctgccgtcc tgcgtgtcgc
    17101 cgatgtacat gccggggcgt ttgcgtaccg cttccaagcc ttcgagcacc tggatgctgt
    17161 cggcgccgta ttcttcgtgt ttttgttcag tcatattttt tgccggattt tgaaaagatt
    17221 ttgcgatgcc gccaaaacag tccgcacctt gtggaaaaag cgggcgggac ggcgcatata
    17281 attgtgtatt atagccgatt tcgccgcctg attcagcgtt atccgcatcc ggatgccgtc
    17341 tgaaagggcg tgcggcgcat ttgcggccgg tacgggcgcg gaatttgccg gcaaagtggc
    17401 aaaagcgttt ttttgccact aaaatctaca ccctatactt ttcggacagg ggcgcggaaa
    17461 tggaaatatg gaatatgttg aacacttggc ccgatgccgt cccgatacgc gcggaggcgg
    17521 ccgaatccgt ggcggcggtc gcggctttgc tgctggcgcg cgcccttctg ttgaatatcc
    17581 acttcagacg gcatccggat ttcggcatcg aaagcaagcg gcggtttttg gttgccagcc
    17641 gcaatataac gctgcttttg gtgctgtttt cgctggcatt tatctggtcg gcgcaaattc
    17701 aaacgctggc gttgtcgatg tttgcggtgg cggcggcggt cgtcgtggcg acaaaagaac
    17761 tgattatgtg tctgtcgggc agtattttaa ggtctgccac ccagcaatac tcggtcggcg
    17821 actatatcga aatcaacggc ctgcgcgggc gcgtggtcga catcaatctg ttgaacacgc
    17881 tgatgatgca ggtcggtccg aaccccttgg tcggacagct tgcgggaacc accgtttctt
    17941 tccccaacag cctgttgttg agccaccccg tgcgccgcga caatattttg ggcgactatg
    18001 tcatccatac ggtcgaaatc cccgttccca tccatttgga ttcggatgaa gccgtatgcc
    18061 gtctgaaagc cgtactcgag cccttgtgcg cgccctacat ccccgccatt cagcggtatt
    18121 tggaaaacgt gcaggcggaa aaactgttta tcacgcccgc cgccaggccg cgcgttaccc
    18181 gcgtaccgta cgacgacaag gcataccgca tcatcgtccg cttcgcctcc cccgtttcaa
    18241 agcggctgga aatccaacag gcggttatgg acgaattttt gcgcgtacaa taccgcctgt
    18301 taaatcatcc cgccggctcc gaaacacttt aactttcccc ggccggcccc atttctggct
    18361 tcagacggca tattgccgat atgccgtctg aagcacaaca cgcaaaggaa acccatctta
    18421 tgattgacaa cgcactgctc cacttgggcg aagaaccccg ttttaatcaa atcaaaaccg
    18481 aagacatcaa acccgccgtc caaaccgcca tcgccgaagc gcgcggacaa atcgccgccg
    18541 tcaaagcgca aacgcacacc ggctgggcga acaccgtcga gcgtctgacc ggcatcaccg
    18601 aacgcgtcgg caggatttgg ggcgtcgtgt cccatctcaa ctccgtcgtc gacacgcccg
    18661 aactgcgcgc cgtctataac gaactgatgc ctgaaatcac cgtcttcttc accgaaatcg
    18721 gacaagacat cgaactgtac aaccgcttca aaaccatcaa aaattccccc gaatttgcaa
    18781 cgctttcccc cgcacaaaaa accaagctcg atcacgacct gcgcgatttc gtattgagcg
    18841 gcgcggaact gccgcccgaa cagcaggcag aactggcaaa actgcaaacc gaaggcgcgc
    18901 aactttccgc caaattctcc caaaacgtcc tagacgcgac cgacgcgttc ggcatttact
    18961 ttgacgatgc cgcaccgctt gccggcattc ccgaagacgc gctcgccatg ttcgccgccg
    19021 ccgcgcaaag cgaaggcaaa acaggttaca aaatcggctt gcagattccg cactaccttg
    19081 ccgtcatcca atacgccggc aaccgcgaac tgcgcgaaca aatctaccgc gcctacgtta
    19141 cccgtgccag cgaactttca aacgacggca aattcgacaa caccgccaac atcgaccgca
    19201 cgctcgaaaa cgcattgaaa accgccaaac tgctcggctt taaaaattac gccgaattgt
    19261 cgctggcaac caaaatggcg gacacgcccg aacaggtttt aaacttcctg cacgacctcg
    19321 cccgccgcgc caaaccctac gccgaaaaag acctcgccga agtcaaagcc ttcgcccgcg
    19381 aacacctcgg tctcgccgac ccgcagccgt gggacttgag ctacgccggc gaaaaactgc
    19441 gcgaagccaa atacgcattc agcgaaaccg aagtcaaaaa atacttcccc gtcggcaaag
    19501 tattaaacgg actgttcgcc caaatcaaaa aactctacgg catcggattt gccgaaaaaa
    19561 ccgtccccgt ctggcacaaa gacgtgcgct acttcgagct ggagcaaaac ggcaaaacca
    19621 tcggcggcgt ttatatggat ttgtacgcac gcgaaggcaa acgcggcggc gcgtggatga
    19681 acgactacaa aggccgccgc cgctttgccg acggcacgct gcaactgccc accgcctacc
    19741 tcgtctgcaa cttcgccccg cccgtcggcg gcaaagaagc gcgtttaagc cacgacgaaa
    19801 tcctcaccct cttccacgaa accggccacg gactgcacca cctgcttacc caagtggacg
    19861 aactgggcgt gtccggcatc aacggcgtag aatgggacgc ggtcgaactg cccagccagt
    19921 ttatggaaaa cttcgtttgg gaatacaatg tattggcaca aatgtccgcc cacgaagaaa
    19981 ccggcgagcc cctgccgaaa gaactcttcg acaaaatgct cgccgccaaa aacttccaac
    20041 gcggcatgtt cctcgtccgc caaatggaat tcgccctctt tgacatgacc atttacagcg
    20101 aagacaacga aggccgtctg aaaaactggc agcaggtttt agacagcgtg cgcaaagaag
    20161 tcgccgtcat ccaaccgccc gaatacaacc gcttcgccaa cagcttcggc cacatcttcg
    20221 ccggcggcta ctccgcaggc tattacagct acgcatgggc ggaagtcctc agcgccgacg
    20281 cctacgccgc ctttgaagaa agcgacgacg ttgccgccac aggcaaacgc ttctggcagg
    20341 aaatcctcgc cgtcggcggc tcccgcagcg cggcggaatc cttcaaggcc ttccgcggac
    20401 gcgaaccgag catagacgca ctgctgcgcc acagcggctt cgacaacgcg gcttgatagt
    20461 caggttgata taaaaagcgg attcgatgta gaaatacctg aatcgttatc cccgcgcagg
    20521 cgggaatccg gaacataaaa ttgaagaaac cgttttaccc gataagtttc tgtgccgaca
    20581 agtctggatt cccgcctgcg tgggaatgac gacaaagata tttttatttg aaatttacta
    20641 taaaaggccg tctgaaaatt tttcagacgg cctttttata atctaaaact gtcggattcg
    20701 ggaatacaat ccaaacaggc tattgattat cataatgccg aagtacaaac ccccaaagcc
    20761 gatggtaatg gtagcgcaag aatattgatt aattatccaa acgcatcatg gcttacacaa
    20821 cgcagccatt gaattaggct tcagcccacc aatccctccg cctacgccgc gcattcgtga
    20881 aaaacgcata agacccggac atggttggtt gaattggtgg aaacggctgg ctgaagcaca
    20941 ccctacggca taccctgcgt atctgacgcg acgaaatata aaatgccgtc tgaaacagat
    21001 tcccgtttca gacggcattt ttgcgtaccg gccggattat ttgttgtccg gcttagattc
    21061 catcggtgcg gtcaggggca gttccggcat cgtgcgcgct gattcggaaa cattgccgga
    21121 aagtgcattc aggaatacga cgatgttatc cacatcttct ttcggaatgt ctttacccaa
    21181 ttgcgcctta cccatgatgg taactgcctt atccagctcc cacacgctgc cgttgtggaa
    21241 atacggataa gttttagcca cgttacgcaa ccccggaaca cggaagaaaa attcgtcttc
    21301 ggtttttttg gttacgtcag cacggccttt gtcgcgtttc ggatcttcaa tgaatttcca
    21361 atacggccct tggaccagac cgaatttctg gaaggtcgtg cctccaaggt tgacaccgtt
    21421 gtggcaggca atacagccgt tgtccatgaa cgcgcgcacg ccttttcgtt cctgttcgct
    21481 cagggcgttg acgttgcctt tgaggtattc gtcccatttg gtcggcgtca gcagggtacg
    21541 ctcaaacgca cccaatgcgg tagtgatgtt tttaaacgaa accgcgccgt cttcaggaaa
    21601 agctttttta aacatttctt gatattcggg aactttggcg attttggctg cagccgcctc
    21661 ttgcgaatca ttcgccattt ccaccggatt caccaaaggc ccgccagcct gttcttcaac
    21721 atcggcggca cgtccgtccc aaaactggct gcccagcagc gcagcattca atgcggtagg
    21781 cgagttgcgt ccgccgaact gccctttgtg cccctgactg gtcggcatat tgtccacacc
    21841 ggcggaagca aggttgtggc aagagttgca gcttacggta ttgcctttgg aaaggcgtgg
    21901 ttcataccag agttggtgtc cgagtttgac ctgttcttcg gtaaacggac ggattttctg
    21961 catttcttcg acagtcggca aaggttggaa tacaccttgc gcgcgtttca aaaggtcttg
    22021 gtcttcgggc gaggccgatg aagcggaagg aacggcttcc gaggcctgta cttgggaagc
    22081 cgcttcggtc tcggaagcag gagaagcatc gcctgccgca gacttttcct gaccgccgca
    22141 tgccgccaac agtgaagaca atgccaatac tgatgcgagg taacggagtt tgaaagacat
    22201 cgtgtattcc ttatgggagg ttaaaatcat tgttcaaacc ggcaggcaaa cctgttctgc
    22261 cgattatttc ttcagtgtac ctatcgcacc tttagccatc tttgcggaaa atcaatattt
    22321 tattttcaat agctttacac aataataccg atagagaatc aagtttaaca aaatgccgtc
    22381 tgaaaccggt aaagcttcag acggcatttt attttccgac atcattgaat caaacccaaa
    22441 tgcgataaga gcgtccatgt accgatggca atcaacacca aacctccggc aaattccgca
    22501 cgcctgccga acaatacgcc aaaagccttt cccgccgtca gcccgatggt aaccattacc
    22561 gtagccgcca taccgattac ggcggcggca aaggcgatgt ttacctccat aaacgccaag
    22621 cccaccccga cgatcatgga atcaatactg gttccaaaag cagtcaaaac cgtcatccat
    22681 aggctttcct gtttgctttc gcgcacatct tccgcctcgc cggacaaccc ttcgcgcatc
    22741 attttcagac ccagtccgcc caacaggaca aaagccaccc aatggtccca ttcgctgata
    22801 aacggcttgg cataaaaacc gcctacccag cccgccagcg gcatgaacgc ttcaaccgta
    22861 ccgaacacca aagccgttgc tgcaattttg cgcgggggca tcctgaccgc cgcgcccttt
    22921 gccagcgcga cggcaaacgc atccatcgac attcccagcg caaccaagag caaagcgtaa
    22981 agactcatac cgcacccatc cttaaaaagg gcggattata acaaaacagc aaagcgcgaa
    23041 aaacgccgca cgaaaacccg catcccgtta ttcccgcaaa aacaaaaaat caaaaacaga
    23101 aatcccgtca ttcccacgaa agtgggaatc cagccccgtc ggcacggaaa cttatcggga
    23161 aaacggtttc tttagatttt acgttccgga ttcccacttt cgcgggaatg acgcggaaaa
    23221 gttttcgtgc cggtttgaac cggtggggat ggtgcgggaa tgacgggata ttttgcgttt
    23281 atagtggatt aacaaaaatc aggacaaggc gaggcaacgc cgtaccggtt taaatttaat
    23341 ccactataat aaaaaacgcc cactgaaacg gcggggcgag gtgtggaaat gccgtctgaa
    23401 acggtcaaac gacgtttcag acggcatttt tatgcccggt tatttccggt atcggacggc
    23461 gcgggacagg atttcttcaa tttccatcca cataatgccc ccttacagca aaccggcctg
    23521 acccagtgcg ggatcggtcg cgcgggcggc ttgtgcgtct tcgacggtca gtccgagggc
    23581 tttggctacg ccttcaccgt atgccgggtc gcaacggtag cagttgcgga tatggcggta
    23641 tttgatgaag tcgggcgcat cgcccatggc tgcggcggtg ttgtcaaaca aagcctgttt
    23701 ctgcgcgtcg ttcatcaggt tgaacaaggc gcgcggttgg ctgaagtagt cgtcatcgtc
    23761 ttggcggtag tcccagtgtg ccgcgtcgcc gttgattttc aaaggcggtt cggcgaagtc
    23821 gggttgttgc tgccattggc cgaagctgtt gggttcgtag tgcggcaggc tgccgtagtt
    23881 gccgtcggcg cggccttgtc cgtcgcgctg gttgctgtga acagggcaac gcggacgatt
    23941 gacggggatt tggcggaagt tcacacccaa gcggtaacgt tgcgcgtcgg cgtaattgaa
    24001 caaacgggct tgcaacattt tatccgggct cgcgccgata ccgggaacga ggttgctcgg
    24061 tgcgaaggcg gattgttcca catcggcgaa gaagttttcg ggattgcggt tcaactcgaa
    24121 ttcgcccact tcaatcagcg gatagtcttt tttcggccaa actttggtca agtcaaacgg
    24181 atgataaggc actttttcgg catcggcttc aggcatgact tggatgtaca tcgtccattt
    24241 cgggaactcg ccgcgctcga tggcttcgta caggtcgcgc tgatggcttt cgcggtcgtc
    24301 ggcgatgatt tttgcagctt cttcgttggt caggttttta atcccttgct ggctgcggaa
    24361 atggaatttc acccaaaaac gttcgcccgc ttcgttccag aagctgtagg tatgcgaacc
    24421 gaagccgtgc atatggcggt agctggcggg aataccgcgg tcgctcatca cgatggtaac
    24481 ttggtgcagg gcttcgggca gcagcgtcca gaagtcccag ttgtttgtgg cggaacgcat
    24541 attggtgcgc ggatcgcgtt tgacggcttt gttcaggtcg gggaatttgc gcgggtcgcg
    24601 caggaagaac acgggcgtgt tgttgccgac cacatcccag ttgccttctt cggtatagaa
    24661 tttcaacgca aaaccgcgga tgtcgcgttc cgcatcggct gcgccgcgct cgcctgccac
    24721 ggtggtgaaa cgggcgaaca tctcggtttt tttgccgact tcgctgaaaa ttttggcgcg
    24781 ggtgtatttg gtgatgtcgt gtgttacggt aaacgtaccg aacgcgcccg aacctttggc
    24841 gtgcatacgg cgttcgggga tgacttcgcg cacgaagtcg gcgagttttt cattcagcca
    24901 caaatcttgc gtcagcaggg ggccgcgcgg gccggcggtc aggctgtttt gattgtcggc
    24961 aacgggcgcg ccgttgttca tggtcagatg ggttacgggg catttggagg tagtcatcgc
    25021 tcttgttcct tttctcaggt tggtcaaatg gggggcaaac ggcttacagt acgatttggc
    25081 ggaaagcgta ttcgtaaccg gtttcttgat tgtaataaat ttcttgaatc g
//
LOCUS       DAXFZM010000018        24316 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.018, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000018 DAXFZM010000000
VERSION     DAXFZM010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 24316)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24316)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24316
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.018"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(260..2539)
                     /gene="nrdA"
                     /locus_tag="ACFJAG_000661"
     CDS             complement(260..2539)
                     /gene="nrdA"
                     /locus_tag="ACFJAG_000661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004748 - ribonucleoside-diphosphate
                     reductase activity, thioredoxin disulfide as acceptor
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class 1a ribonucleoside-diphosphate reductase
                     subunit alpha"
                     /protein_id="HFC3980019.1"
                     /translation="MNTPTDLKVTKRDGRLEAIDLDKIHRVVTWAAEGLENVSVSQVE
                     LKSHIQFYNGIRTDDIHETIIKAAADLISEDTPDYQYLAARLAIFHLRKIAYGEYEPP
                     HLYNHVKKLTDAGKYDRHILEDYSREEFDELNAYIDHERDMSFSYAAVKQLEGKYLVQ
                     NRVTRQIYETPQFLYVLVAMCLFSKYPKEVRLGYVKRFYDAVSTFKVSLPTPIMSGVR
                     TPTRQFSSCVLIECDDSLDSINATTSAIVKYVSQRAGIGINAGRIRGLDSEIRGGEAR
                     HTGCIPFFKMFQAAVKSCSQGGVRGGAATLFYPLWHIEAESLLVLKNNRGVEDNRIRQ
                     LDYGVQINRLLYTRLIKGGNITLFSPNEVSGLYEAFFADQDEFERLYTKYEQDPNIRK
                     RIIPAADLFSTLMQERAGTGRIYIQNVDHCNTHSPFDPRVAPVHQSNLCMEIALPTKP
                     LDNINDPDGEIALCTLSAFNLGALNSLDELEGLADLTVRALDALLDYQGYPVEAARTS
                     TMDRRSLGIGVINYAYYLAKNGVRYSDGSALGLTHRTFEAIQYYLLKASANLAKEYGA
                     CTLFNQTVYSQGKLPIDTYKKDLDAVCGEPLHYDWESLRADIVKYGLRNSTLTALMPS
                     ETSSQIANATNGIEPPRGLVTVKASKDGILKQVVPEFETLKNAYETLWQLPGNEGYLK
                     LVGVMQKFVDQAISANTAYDPGKFEGNKVSMKQMLKDLLTAYKYGVKTLYYHNTRDGA
                     DDTQTDIQDDGCAGGACKI"
     gene            3070..3381
                     /locus_tag="ACFJAG_000662"
     CDS             3070..3381
                     /locus_tag="ACFJAG_000662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response protein"
                     /protein_id="HFC3980020.1"
                     /translation="MLAILLSAILGLVSTTAAAGTSEPAHRHTKHISKANKQMLHPEC
                     RKYLERRAAWYRSQGNVQELRENKKARKAFRTLPYAEQKIQCRAAYEAFDDFDGGRFR
                     R"
     gene            complement(3431..3541)
                     /locus_tag="ACFJAG_000663"
                     /pseudo
     CDS             complement(3431..3541)
                     /locus_tag="ACFJAG_000663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(3644..4411)
                     /locus_tag="ACFJAG_000664"
     CDS             complement(3644..4411)
                     /locus_tag="ACFJAG_000664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HFC3980021.1"
                     /translation="MSSNKASFFTRLRRLCRLTVWLFKTGKNLRGIDGGCPKSRNRAV
                     IALGKGALAALDIGLEVGRPAPEHPNGVLVAANHVSWLDIFAMSAVYPSSFIAKQEIK
                     SWPVLGKMGQNAGTVFINRNSRRDIEPINRAVCETLQRGQNVSFFPEARTSSGLGLLP
                     FKAALFQSAIDAGAKVLAVALRYYDETGKRTARPSYADVGLPTCLWRIVSMKKLTIKV
                     DFVCVADAAESEDRYALKDKIEESIRAVVAGDADVAV"
     gene            complement(4499..5326)
                     /gene="mutM"
                     /locus_tag="ACFJAG_000665"
     CDS             complement(4499..5326)
                     /gene="mutM"
                     /locus_tag="ACFJAG_000665"
                     /EC_number="3.2.2.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008534 - oxidized purine nucleobase
                     lesion DNA N-glycosylase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-formamidopyrimidine glycosylase"
                     /protein_id="HFC3980022.1"
                     /translation="MPELPEVETTLRGIAPHIEGKTVEAVILRQLKLRWQINPDLGEI
                     LSGRQVLSCGRRAKYLIVRFQTGILLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVF
                     SDGTVMRYRDPRKFGAILWYEGIEERHPLLEKLGPEPLSEAFCTDYLYAGLKAQKRAV
                     KLALMDNTVVVGVGNIYANESLFRAGISPHRPANRLKKKECAVLVETVKAVLQRAIET
                     GGSTLRDFVDSDGKSGYFQQEYTVYGRHNQPCLRCGGLVVKETLGQRGTFYCTNCQK"
     gene            complement(5379..6044)
                     /locus_tag="ACFJAG_000666"
     CDS             complement(5379..6044)
                     /locus_tag="ACFJAG_000666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HFC3980023.1"
                     /translation="MDAWFEDTAMGRYVAKLEQDFFNRYVASYRFSGMCAVQVGGQWL
                     SLSEDIVCVPRDMSMSAENMALADVFADMLLLPHTLECGVPSQILSEAHRILKPSGRL
                     MLTGFNPYSLWGFCRWFDGVRLPEKRFCLPLPELKRQLADAGFDIEFGKFMVYLPPVS
                     SLGQIRFWRFMEKAGDRWWPQCAAVYGLVLVKRAAGVTPLPAWDGYWGGKALAAGAAR
                     VAD"
     gene            6223..8199
                     /locus_tag="ACFJAG_000667"
     CDS             6223..8199
                     /locus_tag="ACFJAG_000667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HFC3980024.1"
                     /translation="MSKLKTIALTASGLSVCPGFLYAQNTSSHQVGLAIMRLNSSILD
                     LPPTKQYFQSGSLWDELRQGFRMGEVNPELVRRHESKFIASRSYFDRVVNRSRPYMYH
                     IANEVKKRNMPAEAALLPFIESAFVTKAKSHVGASGLWQFMPATGRHYGLEKTPVYDG
                     RHDVYAATDAALNYLQYLYGLFGDWPLAFAAYNWGEGNVGRAVNRARDQGLEPTYENL
                     RMPNETRNYVPKLLAVRNIIATPQSFGMNISDIDNKPYFQAVEPGRPLDNEAIARLAG
                     ITQSELLALNPAFNVPAFIPKNKRKLLLPVASVQTFQSNYLNAAPDSLFSWEVYTPAA
                     KTSLSDISTATGMSIADIKRLNNLNGNLVNAGRSILVAKNGKTLHTASESVVSIDIDN
                     TPDTYRSNMPAGTVNVSIARIQPAAAQTADITVAPLPQETVRTEPDPLVRIAEPALAT
                     AAAQPQTEKQTAMPSETQTATLAQVVPPNDMQAADELMQLVARNNLRRQAEETISAVI
                     GTPDTVAEHNISSSPQHTVAADGKRRARLETRVAKAADGEAETSPLHASIHRVVEGDT
                     LFNIAKRYNVSVADLIVANNIKGNTIQKGQVLRLAQAAPAQTRIEKVSYTARKGDTFK
                     SIAARFNIHIDDIRRLNPNLNTINPGQRVKLIGS"
     gene            8267..8959
                     /locus_tag="ACFJAG_000668"
     CDS             8267..8959
                     /locus_tag="ACFJAG_000668"
                     /EC_number="5.4.99.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_function: GO:0140098 - catalytic activity, acting on
                     RNA [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA pseudouridine(516) synthase"
                     /protein_id="HFC3980025.1"
                     /translation="MKLIKYLQYQGIGSRKQCQWLIRGGYVSINGTCMDDTDADIDSS
                     YVETLDIDGEAVTVVPEPYFYILLNKPEDYETSHKPKHYRSVFSLFPDNMRNIDMQAV
                     GRLDADTTGVLLITNDGKLNHNLTSPSRKIPKLYEVTLKHPTGETLCETLKNGVPLHD
                     ENETVCAADAVLENPTTLLLTITEGKYHQVKRMVAAAGNRVQHLHRRRFAHLETENLK
                     PGEWKFIECPKF"
     gene            9433..10803
                     /locus_tag="ACFJAG_000669"
     CDS             9433..10803
                     /locus_tag="ACFJAG_000669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HFC3980026.1"
                     /translation="MSSPSNTNRQTWSSRLTYILTVAGATVGFGATWRFPYLVGENGG
                     GAYVFLFCIAMLVIGIPMILVENVIGRRKGVNALDAFGGPMNGKPVAKIWKLVGRMGL
                     LGAFGIMAYYMVLGGWVISYIVNIIGGNLNISSPVDGVVTKGFFTEHIENSPWEIAFY
                     TLLFVAVNQWILVKGVIGGIEKTAKYLMPLLFLFLIAMVVRNVTLPGAMEGVAFYLKP
                     DFSKITAELFVFVLGQVFFALSLGFGVMITLSSYLDKNENLVQTAVITAITNTIIAVL
                     AGFMIFPSLFSFGVAPNSGPTLVFQSLPIVFSHMWAGPVFAVIFFSLLLIAALTTSLT
                     IYEVLITTIQEKTKIRRTAAITIVLSVIFVFGNIPSILSYGPWKDVSVFGKNIFDAFD
                     YISGNILFMLTALGSALFVGFVMKDEAKEELLYKGNHTTVNIWFAYVKYLVPLVILLI
                     FVSNLF"
     gene            11036..11692
                     /gene="cmk"
                     /locus_tag="ACFJAG_000670"
     CDS             11036..11692
                     /gene="cmk"
                     /locus_tag="ACFJAG_000670"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004127 - (d)CMP kinase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HFC3980027.1"
                     /translation="MNRQKVIAIDGPGASGKGTVAARVAAALGYDYLDTGALYRLTAL
                     YAQKQGVEWHDEENVSALAKKLPAVFSGNRILLDGEDVSDGIRTEAIGMGASAVAQWP
                     KVRAALLQRQRDFLTEKGLVADGRDTGSVVFPQAELKIFLTAESKIRAERRAKQIGIP
                     CEGFTFERILSDIETRDEADRNRKVAPLKQQSDALLLDTSRLTIEETVKKVLDWYRKV
                     "
     gene            11845..13530
                     /gene="rpsA"
                     /locus_tag="ACFJAG_000671"
     CDS             11845..13530
                     /gene="rpsA"
                     /locus_tag="ACFJAG_000671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HFC3980028.1"
                     /translation="MSMENFAQLLEESFTLQEMNPGEVITAEVVAIDQNFVTVNAGLK
                     SESLIDVAEFKNAQGEIEVKVGDFVTVTIESVENGFGETKLSREKAKRAADWIALEEA
                     MENGNILSGIINGKVKGGLTVMISSIRAFLPGSLVDVRPVKDTSHFEGKEIEFKVIKL
                     DKKRNNVVVSRRAVLEATLGEERKALLENLQEGSVIKGIVKNITDYGAFVDLGGIDGL
                     LHITDLAWRRVKHPSEVLEVGQEVEAKVLKFDQEKQRVSLGMKQLGEDPWSGLTRRYP
                     QATRLFGKVSNLTDYGAFVEIEQGIEGLVHVSEMDWTNKNVHPSKVVQLGDEVEVMIL
                     EIDEGRRRISLGMKQCQANPWEEFAANHNKGDKISGAVKSITDFGVFVGLPGGIDGLV
                     HLSDLSWTESGEEAVRKYKKGEEVEAVVLAIDVEKERISLGIKQLEGDPFGNFISVND
                     KGSLVKGSVKSVDAKGAVIALSDEVEGYLPASEFAADRVEDLTTKLKEGDEVEAVIVT
                     VDRKNRSIKLSVKAKDAKESREALNSVNAAANANAGTTSLGDLLKAKLSGEQE"
     gene            13541..13855
                     /locus_tag="ACFJAG_000672"
     CDS             13541..13855
                     /locus_tag="ACFJAG_000672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003744632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005694 - chromosome [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HFC3980029.1"
                     /translation="MTKSELMVRLAEVFAAKNGTHLLAKDVEYSVKVLVDTMTRSLAR
                     GQRIEIRGFGSFDLNHRPARIGRNPKTGERVEVPEKHVPHFKPGKELRERVDLALKEN
                     AN"
     gene            complement(14051..14458)
                     /locus_tag="ACFJAG_000673"
     CDS             complement(14051..14458)
                     /locus_tag="ACFJAG_000673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HFC3980030.1"
                     /translation="MTYTTAKAAEKIGISAHTLRFYDKEGLLPNIGRDEYGNRCFTDN
                     DLQWLYLLQCLKNTGMSLKDIKRFAECTVIGDDTIEERLSLFENQIENVKCQIAELKR
                     YLDLLEYKLAFYQKAKALGSVKAVNLPQIPETA"
     gene            14608..15718
                     /locus_tag="ACFJAG_000674"
                     /pseudo
     CDS             14608..15718
                     /locus_tag="ACFJAG_000674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000842106.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004024 - alcohol dehydrogenase (NAD+)
                     activity, zinc-dependent [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0051903 - S-(hydroxymethyl)glutathione
                     dehydrogenase [NAD(P)+] activity [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="S-(hydroxymethyl)glutathione dehydrogenase/class
                     III alcohol dehydrogenase"
     gene            15727..16554
                     /gene="fghA"
                     /locus_tag="ACFJAG_000675"
     CDS             15727..16554
                     /gene="fghA"
                     /locus_tag="ACFJAG_000675"
                     /EC_number="3.1.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011961786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018738 - S-formylglutathione hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0046294 - formaldehyde catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-formylglutathione hydrolase"
                     /protein_id="HFC3980031.1"
                     /translation="MKLIEQHQIFGGSQQVWAHHAQTLQCEMKFAVYLPDNPENQPLG
                     VIYWLSGLTCTEQNFITKSSFRRYAAEHQVVVVAPDTGPRGEQVPNGAAYDLGQGAGF
                     YLNATEQPWAANYQMYDYILNELPRLIEEHFPTNGKRSIMGHSMDGHGALVLALRNRE
                     HYQSVSAFSPILSPSLVPWGEKAFTAYLGKDREKWQQYDANSLIQQGYKVQGMRIDQG
                     LEDEFLPTQLRTKDFIETCRAANQPIDVRFHKGYDHSYYFIASFIGEHIAYHAAFLK"
     gene            17084..18235
                     /gene="zapE"
                     /locus_tag="ACFJAG_000676"
     CDS             17084..18235
                     /gene="zapE"
                     /locus_tag="ACFJAG_000676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapE"
                     /protein_id="HFC3980032.1"
                     /translation="MNNRDQLFKAPPFENHSPLTWYQAASQLPNFIRDDAQAAAIEHL
                     DRLWTELMMFKRKRNRFLGRSLRSPQVPKGLYFYGGVGRGKSFLMDAFFGCLPYRRKR
                     RVHFHAFMAEIHRRLKALKSESNPLKSVAAEITKETRVLCFDEFHVSDIADAMILGRL
                     LENLLNEGVVLVATSNYAPSELYPQGQNRSGFLPTIALIESSLTVLNVDGGEDYRLRT
                     LRPAEIFFTPANEENEAKLAKLFKEMTGITDLNPGISTIHGREIPHKAESGRTIWFDF
                     RALCFSPRSQSDYLYLAEHYEMVFISGLEQLSPQEKAEARRLTWLIDVLYDFRVKLCA
                     TGAVDVNHIYTEGDFAEEFTRTASRMVEMQSEVYLEQPHLTLSPKASGG"
     gene            18294..18719
                     /gene="ndk"
                     /locus_tag="ACFJAG_000677"
     CDS             18294..18719
                     /gene="ndk"
                     /locus_tag="ACFJAG_000677"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004550 - nucleoside diphosphate kinase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HFC3980033.1"
                     /translation="MAIERTISIIKPDAVGKNVIGKIYSRFEENGLKIVAAKMKQLTL
                     KEAQEFYAVHKDRPFYAGLVEFMTGGPVMIQVLEGENAVLKNRELMGATNPTEAAEGT
                     IRADFATSVSINAVHGSDSVENAALEIAYFFSQTEICPR"
     gene            18863..19957
                     /gene="rlmN"
                     /locus_tag="ACFJAG_000678"
     CDS             18863..19957
                     /gene="rlmN"
                     /locus_tag="ACFJAG_000678"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016433 - rRNA (adenine) methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0030488 - tRNA methylation [Evidence IEA];
                     GO_process: GO:0070475 - rRNA base methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HFC3980034.1"
                     /translation="MKTNLLNYDLQGLTRHFADMGEKPFRAKQVMRWMHQSGAQNFDE
                     MTDLAKSLRHKLNEQASIEIPKLMMSQESSDGTRKWLLDVGTGNGVETVFIPESDRGT
                     LCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQLWWANKAMGVTPKNERVISNVVM
                     MGMGEPMANFDNVVTALSIMLDDHGYGLSRRRVTVSTSGMVPQMDRLRDVMPVALAVS
                     LHASNDEVRNQIVPLNKKYPLKELMAACQRYLVKAPRDFITFEYVMLDGVNDKAQHAY
                     ELIELVKDVPCKFNLIPFNPFPNSGYERSSNENIRIFRDILQQAEFVVTVRKTRGDDI
                     DAACGQLAGQVQDKTRRQQKWQQILIGQQG"
     gene            19960..20721
                     /gene="pilW"
                     /locus_tag="ACFJAG_000679"
     CDS             19960..20721
                     /gene="pilW"
                     /locus_tag="ACFJAG_000679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus biogenesis/stability protein PilW"
                     /protein_id="HFC3980035.1"
                     /translation="MPFKPSKRISLLLVLALGACSTSYRPSRAEKANQVSNIKTQLAM
                     EYMRGQDYRQATASIEDALKSNPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPD
                     SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLA
                     EAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWK
                     IAKALGNVQAAYEYEAQLQANFPYSEELQTVLTGQ"
     gene            20737..22002
                     /gene="ispG"
                     /locus_tag="ACFJAG_000680"
                     /gene_synonym="gcpE"
     CDS             20737..22002
                     /gene="ispG"
                     /locus_tag="ACFJAG_000680"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate synthase activity (ferredoxin) [Evidence IEA];
                     GO_process: GO:0044237 - cellular metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HFC3980036.1"
                     /translation="MNTLQRRKTHQVLIDHITVGSEAPVVIQSMTNTDTADAKATALQ
                     IKELSDAGSEMVRITVNSPEAASKVAEIRRRLDDMGYATPLIGDFHFNGERLLAEFPE
                     CGKALSKYRINPGNVGKGVKGDEKFAFMIRTAAENDKAVRIGVNWGSLDQSLAKRMMD
                     ANLVSSAPKPPEEVMKEALIVSALESAEKAVLLGLPEDKIILSCKVSAVHDLIQVYRE
                     LGSRCVYPLHLGLTEAGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGSPRTQEV
                     VVGQEILQTMGLRSFTPMVTACPGCGRTTSTVFQELAQDVQNYLRQKMSIWRTLYPGV
                     ESLNVAVMGCVVNGPGESKLADIGISLPGTGETPVAPVYVDGERKVTLKGNNIASEFL
                     AIVEEYVKTNYGKNSSKRNKGKVIPIQSL"
     gene            complement(22056..22670)
                     /gene="clpP"
                     /locus_tag="ACFJAG_000681"
     CDS             complement(22056..22670)
                     /gene="clpP"
                     /locus_tag="ACFJAG_000681"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009368 - endopeptidase Clp complex
                     [Evidence IEA];
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HFC3980037.1"
                     /translation="MSFDNHLVPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVTDES
                     ANLVVAQLLFLESENPDKDIFFYINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAAS
                     MGAFLLSAGEKGKRFALPNSRIMIHQPLISGGLGGQASDIEIHARELLKIKEKLNRLM
                     AKHCGRDLADLERDTDRDNFMSAEEAKEYGLIDQVLENRASLRL"
     gene            complement(22766..24076)
                     /gene="tig"
                     /locus_tag="ACFJAG_000682"
     CDS             complement(22766..24076)
                     /gene="tig"
                     /locus_tag="ACFJAG_000682"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003742150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005854 - nascent polypeptide-associated
                     complex [Evidence IEA];
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA];
                     GO_process: GO:0051083 - 'de novo' cotranslational protein
                     folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HFC3980038.1"
                     /translation="MSVTVEILENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGF
                     RPGKAPLKMIAQMYGASAQNDVINELVQRRFYDVAVAQELKVAGYPRFEGVEEQDDKE
                     SFKVAAIFEVFPEVVIGDLSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVDREAR
                     NGDRVIIDFEGKIDGEPFAGGASKNYAFVLGAGQMLPEFEAGVVGMKAGESKDVTVNF
                     PEEYHGKDVAGKTAVFTITLNNVSEPTLPEVDADFAKALGIADGDVAKMREEVKKNVS
                     REVERRVNEQTKESVMNALIKAVELKVPVALVNEEAARLANEMKQNFVNQGMTDAANL
                     DLPLDMFKEQAERRVSLGLILAKLVDENKLEPTEGQIKAVVANFAESYEDPQEVIDWY
                     YADTSRLQAPTSLAVESNVVDFVLGKAKVNKKALSFDEVMGAQA"
BASE COUNT         6329 a         6484 c         5645 g         5858 t
ORIGIN      
        1 tctattaatt tttaattcac catataaaac atgttgaatt ctatcaataa agtgccatcc
       61 taaaatagca aatactaaaa gaacactaat aaatatataa aatttatatt caactaagaa
      121 tgaccgaatg acatccatac ttttcctttt ctggaaaata acaacttagc ctcatatagt
      181 agtaggcact aatttaagaa aatccttgaa gcctcctact atctagaagc cttggatata
      241 tttcaaaaat taacctgttt taaatcttac aagccccacc agcgcagccg tcatcttgaa
      301 tatcggtctg cgtgtcgtcc gcgccgtcgc gggtgttgtg gtagtacagg gttttgacgc
      361 cgtatttgta ggcagtcagc aggtctttga gcatttgttt catagaaact ttgttacctt
      421 cgaatttgcc cgggtcataa gcagtgttgg cggaaatcgc ctgatcgacg aatttttgca
      481 ttacgccgac aagtttcagg tagccttcgt tgcccggaag ctgccacagg gtttcgtagg
      541 catttttcaa ggtttcaaac tccggcacga cttgtttcaa aatgccgtct ttcgatgctt
      601 tgaccgttac caatccgcgc ggcggctcga tgccgttggt ggcgttggcg atttgcgagc
      661 tggtttcaga cggcatgagc gcggtcagag tagagttgcg caggccgtat ttgacgatgt
      721 cggcacgcag gctttcccag tcgtaatgca aaggctcgcc gcagacggca tccaaatctt
      781 ttttgtaggt gtcgatgggc agtttgcctt gcgaataaac ggtttggtta aagagcgtgc
      841 acgctccgta ttctttggca aggtttgccg atgctttgag caggtaatac tgtatggctt
      901 caaaggtacg gtgggtcaga ccgagcgcgg aaccgtcgct gtagcggaca ccgtttttcg
      961 ccagatagta ggcgtagttg atgacaccga tgccgagcga acgccggtcc atagtagagg
     1021 tacgcgcggc ttctaccgga tatccctgat aatctaaaag tgcatcgagt gcgcgcacgg
     1081 tcaaatcggc aagcccttcc aattcgtcca agctgtttaa tgcacccaag ttgaaggcgg
     1141 acagtgtaca cagggctatt tcgccgtcag ggtcgttgat gttgtccagc ggtttggtcg
     1201 gcagggcgat ttccatacac aagttggact gatgaacagg cgcaacgcgc ggatcgaacg
     1261 ggctgtgcgt attgcagtga tcgacgtttt gaatgtagat gcgcccggtc ccggcacgct
     1321 cctgcatcag cgtggaaaac aggtcggcag ccggaatgat acgcttgcgt atgttcgggt
     1381 cttgctcgta tttcgtatag agccgctcaa attcgtcttg gtcggcaaaa aacgcttcgt
     1441 acaaccccga aacctcgttg ggcgaaaaca gcgtaatgtt gccgccctta atcaggcggg
     1501 tgtacagcag gcggttgatt tgcacgccat aatcaagctg gcggatacgg ttgtcttcca
     1561 cgccccggtt gtttttcaac accagcaggc tttcggcttc aatatgccac aaggggtaga
     1621 acaaggttgc cgcgccgccg cgcacgccac cttgcgaaca agatttgacc gccgcctgaa
     1681 acatcttaaa gaagggaatg cagccggtat gccgggcttc accgccccgg atttcgctgt
     1741 ccagcccgcg gatacgtccg gcattgatgc cgatgcccgc gcgttgggaa acgtatttca
     1801 caatcgcgct ggtagtggca ttgatggaat ccaaactatc gtcgcattca atcagcacac
     1861 agcttgagaa ctggcgcgta ggcgtacgca cgccgctcat aatcggcgtg ggcaacgata
     1921 ctttgaatgt ggaaacggca tcgtaaaacc gtttgacgta acccaagcgc acctctttcg
     1981 ggtatttgct gaaaaggcac atcgccacca aaacatataa aaactgcggc gtttcgtaaa
     2041 tctggcgggt aacgcggttc tgtaccagat atttgccttc gagctgtttg acggcggcat
     2101 aggaaaagga catatcgcgt tcgtggtcga tataggcgtt cagttcgtca aattcttcgc
     2161 ggctgtaatc ctcaaggata tgcctgtcgt attttccggc atcggtgagc tttttaacat
     2221 ggttgtaaag gtgcggcggc tcgtattcgc cgtaggctat tttacgaaga tggaaaatcg
     2281 ccaaacgtgc ggcaaggtat tggtagtccg gggtatcttc cgaaattaaa tctgcagcgg
     2341 ctttgatgat ggtttcgtgg atgtcgtcgg tgcggatgcc gttgtagaac tggatgtgcg
     2401 atttcaactc gacctgcgac acggaaacat tttccaatcc ttccgccgcc caagtaacga
     2461 cacggtgaat cttatccaaa tcaatggctt ccaatcttcc gtctcgtttg gttactttta
     2521 aatcagtcgg tgtattcatc gcttcctctt ccactcttga tattcaagac acggtctttt
     2581 caaataaatt aaggcagaca atatagtgga tttttagcat tttctccagt cttgacaacg
     2641 attgcatttt tcagtttcag gcaatgcgcg ataaaacccg cctgtcgtat ttttcctata
     2701 acatttgttt tatctgataa ttctttaccg ataaaaaacg ggtaaatttt ttgccttttg
     2761 accggctccg gctacaaggc gatgaaataa ggattttccg acgaaaaagg aaaacttccg
     2821 gttttccgcc cctgcgaatt gttaaatttt gcaaagtatg atttttgcca cgccgccgcc
     2881 gacaaattcc attttcttac cgattggaat ttattattga gattaatatg ttatttgaat
     2941 ttgcatatca aacggcaagt tttgtcggct gaatgagtct gaaactgccg acagtttgcc
     3001 cgttccatcc ttccatccta tactggaagg aattacaaac tgaaaggatc gtcatgtccg
     3061 tcaataaaga tgcttgccat actgttgtct gcaatactgg gactggtatc aacaactgcc
     3121 gctgccggta cgtcagaacc cgcccaccga cataccaaac atatcagcaa ggcaaacaag
     3181 cagatgctgc accccgaatg caggaaatat ttggaacgcc gtgccgcgtg gtaccgatcg
     3241 caaggcaacg tgcaggaatt gcgcgaaaac aaaaaggcgc gcaaagcatt ccgcaccctg
     3301 ccttatgcgg aacagaaaat ccaatgccgg gcggcttatg aggctttcga tgatttcgac
     3361 ggcggcaggt tccgccgtta atcccatata aaatatgctg tctgaacaca agttaagatg
     3421 gcattttcca tagatatagt ggattaaatt tagaccggta cggcgttgcc tcgccttgcc
     3481 gtgctatttg tactgtctgc ggcttcgccg ccttgtcctg atttaaattt aatccactat
     3541 acaacaaact atccttacgg catttctttt gaggtactcc cgttaccgca gccttaaggc
     3601 atccgcaaaa gcgaatcata ccgctacatt ccgacaaccg ctttcagacg gcaacatccg
     3661 catcgcctgc gacaacggca cggatgcttt cttcgatttt atcttttaaa gcataacggt
     3721 cttcgctttc cgccgcgtcc gccacgcaaa cgaaatcgac tttgatagtc agttttttca
     3781 tagacacgat tcgccacagg caagtcggca aaccgacatc ggcatacgac ggacgggccg
     3841 tcctttttcc cgtttcgtca taataacgca gtgcgaccgc caaaaccttt gcccccgcat
     3901 cgatggcgga ttggaacagc gcagccttga acggcaggag ccccagtccg gaggaagttc
     3961 gcgcctcagg gaaaaaactg acgttttgac cgcgttgcaa ggtttcgcag acggcgcggt
     4021 taatcggttc gatgtcgcgc cgcgaattgc ggttgatgaa caccgttccc gcgttctgcc
     4081 ccatcttgcc caataccggc cagcttttga tttcctgctt ggcgataaag ctactcggat
     4141 aaaccgcgct catcgcgaaa atatccagcc aggacacgtg gttggcggca accaagacac
     4201 cgttcggatg ttcgggtgcg ggtctgccca cctccaatcc gatatccaaa gccgccaaag
     4261 cgcccttgcc caacgctata actgcccgat tgcgcgactt ggggcagccg ccgtcaatac
     4321 cgcgcaggtt tttgccggtt ttgaacagcc agaccgtcaa gcggcacaag cggcgcagac
     4381 gtgtaaaaaa tgaagcttta tttgaagaca tgggcaattc tttcccgata atcggtgttt
     4441 gttgttgaaa cgttcggacg gcataccgat aaaatgccgt cagaaaccgt tttccgccct
     4501 atttctgaca gttcgtgcaa taaaacgtgc cgcgctgccc caaagtttct ttcacaacca
     4561 aaccgccgca ccggaggcac ggctgattgt gccgcccgta caccgtatat tcctgttgaa
     4621 agtagccgct tttgccgtcg ctgtccacaa aatccctcag cgtactgccg cccgtttcaa
     4681 tggcgcgctg caacaccgct ttgacggttt caaccaaaac cgcgcactct ttctttttta
     4741 ggcggttggc aggacggtgg ggcgaaatgc ccgccctgaa cagactctcg ttggcataaa
     4801 tattgcccac gccgaccacg acggtattgt ccatcagagc gagtttgacc gcgcgtttct
     4861 gcgccttcag ccccgcatac agataatccg tgcaaaatgc ctccgacaaa ggctccggcc
     4921 ccagtttttc caacagcgga tgacgttctt cgattccctc ataccaaagt atcgcgccga
     4981 actttctcgg atcgcggtaa cgcatgaccg tgccgtctga aaacacaata tcgacgtgat
     5041 cgtgtctgtc cggcctgccg atacgtccgt ccgacggcgt aaagatccgc aagctgcccg
     5101 acatccccaa gtgaatcagc aaaatccccg tttggaaacg gacaatcaga tatttggcac
     5161 gcctgccgca ggacaaaacc tgccggccgg acaaaatctc ccccaaatcg ggattgatct
     5221 gccagcgcag cttcagttgg cgcaatatca cggcttccac cgtttttcct tcaatatgcg
     5281 gcgcgatgcc gcgcaacgtc gtttccactt ccggcaattc cggcataacc cctcccgaca
     5341 ttttttctga cagatgccgt ctgaaagacg gccgtccctt aatccgcaac ccttgccgca
     5401 cccgccgcaa gggctttgcc gccccaatac ccgtcccacg cgggcagggg cgttacgccc
     5461 gccgcccttt tgaccaaaac caaaccgtac actgcggcac attgcggcca ccaacggtcg
     5521 cccgcctttt ccataaaccg ccaaaagcgt atttgcccga gcgacgaaac gggaggcaga
     5581 tacaccatga atttcccaaa ttcaatatcg aaaccggcat cggcaagctg ccttttcaac
     5641 tcgggcagcg gcagacaaaa ccgtttttcc ggcagacgga caccgtcaaa ccaacggcag
     5701 aatccccaaa gcgaatacgg attgaaaccc gtcagcatca aacgtccgga cggtttcaat
     5761 atccggtgcg cttccgacag gatttgcgaa ggtacgccgc attccagcgt atgcggcaaa
     5821 agcagcatat ccgcaaaaac atccgccaaa gccatattct ccgccgacat cgacatatct
     5881 cgcggcacac agacaatgtc ttcagacagg ctcagccact gaccgcccac ctgaaccgca
     5941 cacattcccg aaaaacggta tgacgccaca taccgattaa agaagtcctg ttccaatttt
     6001 gcaacatacc gccccatcgc cgtatcttca aaccatgcat ccatattgcg tccgtttcaa
     6061 acagattgcc tgccgatatt ttattccaaa caggatttct gtcaaaaaac acatcggccg
     6121 cccatttccg aatccgcata aagttcctgt aaaacttgac gctttttcag tcaaacagta
     6181 ccatcggacg ataaaatatg tttattccgc cgagtataaa tcatgtccaa actcaaaacc
     6241 atcgccctga ccgcatcagg tctgtccgtt tgtccgggtt tcctatatgc ccaaaacacc
     6301 tcatcacacc aagtcggttt agcgattatg cggttaaact cttcaatact cgacctgcca
     6361 ccgacaaaac aatatttcca atccggcagc ctgtgggacg agctgcgcca aggcttccgg
     6421 atgggcgaag tcaatcccga actggtacgc cgccacgaaa gcaaattcat cgcaagccgc
     6481 agctatttcg acagggtcgt caaccggagc cgaccctata tgtaccatat cgccaacgaa
     6541 gtcaaaaaac gcaatatgcc cgccgaagcc gccctgcttc ccttcatcga aagcgcgttc
     6601 gtcaccaaag ccaaatcaca cgtcggcgca tcgggcctgt ggcagttcat gcccgctacc
     6661 ggcaggcatt acggcttgga aaaaacaccg gtttacgacg gcaggcacga cgtttacgca
     6721 gccaccgatg ccgcactcaa ctatctgcaa tatctctatg gactgttcgg cgactggccg
     6781 ctcgcctttg ccgcctacaa ctggggtgaa ggcaacgtcg gacgcgccgt caaccgcgcc
     6841 cgcgaccaag ggctcgaacc gacctacgaa aacctgcgta tgcccaacga aacgcgcaac
     6901 tatgtcccca agctgctcgc cgtgcgcaac attattgcca ccccccaatc tttcggcatg
     6961 aatatcagcg acatagacaa caaaccctat tttcaggcag tcgaaccggg ccgtccgctc
     7021 gacaacgaag ccatcgcccg gcttgccggc atcacgcaaa gcgagctgct cgccctgaat
     7081 cctgcattca acgtccccgc gttcatcccc aaaaacaaac gcaaactgct gcttcctgtc
     7141 gcgtccgtcc aaaccttcca aagcaactac ctcaacgccg cacccgacag cctgttttca
     7201 tgggaagtct atacgcctgc cgccaaaacc agcctgtccg acatctcgac ggcaaccggc
     7261 atgagcattg ccgacatcaa acgcctcaac aacctgaacg gcaaccttgt caacgcagga
     7321 cgcagcatcc ttgtcgccaa gaacggcaag acccttcata cggcatcgga atccgtcgtt
     7381 tccatcgaca tcgacaatac gcccgacacc taccgttcca atatgccggc aggcacggtg
     7441 aacgtcagca ttgcccgaat ccaacccgcc gccgcacaga cagcggacat taccgtcgca
     7501 cctttgccgc aagaaaccgt ccgtacggaa cccgatcccc ttgtccgcat tgccgaaccc
     7561 gcccttgcga cagccgcagc gcaacctcaa accgaaaaac agactgccat gccgtctgaa
     7621 acccaaaccg caacactcgc gcaggtcgtc cccccaaacg acatgcaggc ggcagacgaa
     7681 ctcatgcagc ttgttgcccg aaacaacctg cgccggcagg ctgaagaaac catctccgcc
     7741 gtcatcggca cgcctgacac agttgccgaa cacaacattt cctcatctcc gcaacatacc
     7801 gttgccgccg acggcaaacg ccgggcacgt ttggaaacgc gcgtagccaa agctgccgac
     7861 ggcgaagccg aaacctcccc gctccatgcc agcatccacc gcgttgtaga aggcgacacc
     7921 ctgttcaaca ttgccaaacg ctacaacgtc agcgtagccg acctgattgt cgccaacaac
     7981 atcaaaggca acaccatcca aaaaggacag gtactccgcc tggcgcaggc agcccctgcc
     8041 caaacccgta ttgaaaaagt atcctacacc gcgcgcaaag gcgacacctt caaaagtatc
     8101 gccgcgcgct tcaatatcca tatcgacgac atccgccggc tcaatcccaa cctgaacacc
     8161 atcaatccgg gacagagggt caaactgatt ggaagctgat tcggatacgg cacatgacag
     8221 gactttctca gtcctgtctt tttcatccca catttcccat accatcatga aactcatcaa
     8281 atacctgcaa tatcaaggca taggaagccg caagcagtgc caatggctga ttaggggcgg
     8341 ctacgtctcc atcaacggaa cctgcatgga cgacaccgat gcagacatcg attcctcata
     8401 cgtcgaaacg ttggatattg acggggaagc agtaaccgtc gttcccgaac cctatttcta
     8461 catcctgctc aacaagcctg aagattacga aacttcgcac aaaccgaaac actaccgcag
     8521 cgtattcagt ctgttccccg acaatatgcg gaacatcgat atgcaggcgg tcggcaggct
     8581 ggatgcggat acgaccggcg tattgctaat taccaacgac ggcaaactga accacaacct
     8641 gacttcgccg agcagaaaaa ttcccaagct atacgaagta acgctcaaac accctacagg
     8701 agaaacgctc tgcgaaactt tgaaaaacgg cgtgccgctc cacgacgaaa acgaaaccgt
     8761 ttgtgccgcc gatgccgttt tggaaaatcc gaccaccctg ctgctgacca ttaccgaagg
     8821 aaaataccac caagtcaaac gcatggttgc cgccgccggc aaccgcgtgc aacaccttca
     8881 ccgccggcga ttcgcacatt tggaaacaga aaacctcaaa cccggggaat ggaaatttat
     8941 cgaatgtccg aaattctgaa acaaaattcc ataatttccc tatattcaac catatgctta
     9001 ttaaataagc agttttacaa aaattaactc aaaaaacagt tagtttacaa tataatccgc
     9061 ttgtctaagt aacgcctgtt caagcaggat tatgagcaag acgttttccc cgtaatgtgt
     9121 tttgccatct atacttcccc ccttgtatag atggttttct atttcaaatt ccctctcttt
     9181 catcatcatt gaaatgctat cattaatatg attaacaaaa tttcacttcc gtacaccgat
     9241 gtagaaaaat aacagattaa tctgttcata aactccgatt cttcctcatc ggtttatact
     9301 catcagaaat attcactgaa atatatgcat tttacatgga aaatcactag gcagttgaaa
     9361 aacattcagt caatttctgt taagaatcac gtgtaaaatt tccgctttat ctcaatcgga
     9421 cacggtttca atatgtcttc cccttcaaat accaaccgtc aaacctggtc cagccgtttg
     9481 acttatatcc ttaccgttgc cggcgcgact gtcggtttcg gcgcgacgtg gcgtttcccg
     9541 tatttggtcg gtgaaaacgg cggcggcgcg tatgtgtttt tattctgtat cgcgatgctg
     9601 gttatcggca tcccgatgat tttggtggaa aacgtcatcg gacggcgcaa aggcgtgaac
     9661 gcgctggatg cgttcggcgg cccgatgaac ggcaaacctg ttgccaaaat ttggaaactg
     9721 gtcggccgga tggggctgct cggcgcgttc ggcatcatgg cttattatat ggtactcggt
     9781 ggctgggtaa tcagctatat cgttaatatt attggaggaa atttgaatat ttccagcccc
     9841 gtcgacggtg tggttacaaa aggcttcttt accgaacaca ttgaaaacag cccttgggaa
     9901 attgcgtttt atacgctgct ttttgtcgcc gtgaaccaat ggattttggt caaaggcgtt
     9961 atcggcggca ttgaaaaaac ggcgaaatac ctgatgcctc tgctgttttt gttcctaatc
    10021 gcgatggtcg tccgcaacgt tacccttccg ggcgcaatgg aaggggttgc tttctatctg
    10081 aaacctgatt tcagcaagat taccgccgaa ctgttcgtct tcgttttggg acaggtattt
    10141 tttgccctga gcctgggttt cggcgtgatg attaccttat ccagctatct ggataaaaac
    10201 gaaaatctgg ttcagacggc agttatcacg gcaattacca ataccatcat cgctgtactt
    10261 gcgggcttta tgattttccc gtcgctcttc agcttcggcg tcgcgcccaa ttccggcccg
    10321 actttggtgt tccaaagttt accgattgtg ttctcacata tgtgggcagg acctgtgttc
    10381 gccgtcattt tcttctctct gctcctgatt gccgcgttga caacttcgct gacgatttat
    10441 gaagtgttga ttacgaccat tcaggaaaaa accaaaatcc gccgtaccgc cgcaatcacg
    10501 attgtattgt ccgtcatctt cgttttcggc aacatcccgt ctattttgag ctatggcccg
    10561 tggaaagacg tttccgtgtt cggcaaaaat attttcgatg ccttcgacta catcagcggc
    10621 aacatcttgt ttatgctgac cgcgctcggt tccgcattgt ttgtcggttt tgtgatgaag
    10681 gacgaagcga aggaagaatt gctttataaa ggcaaccata cgacggtcaa tatttggttt
    10741 gcctatgtga aataccttgt gccgctggtg attctgctga ttttcgtcag caacctgttc
    10801 taatccgcag caatcaatgc cgtctgaagg tcatacctct ttcagacggc attgcattga
    10861 tgcccgccac gccggaatcc gaaccggctt gccggcttct gtcggacgct ttccgggcag
    10921 gcggcgttcc gtctgcttag acaatcgtcc tttaaaacag gtagaatccg ccccaacggg
    10981 aaacacaccc ttcagacggc aaaacccata ccccaaacca tcaggaatcc cccttatgaa
    11041 cagacaaaaa gtcatcgcca tcgacggtcc gggcgcatcg ggcaaaggca cggtcgccgc
    11101 ccgcgttgcc gccgcattgg gatacgatta tctcgatacc ggcgcgctct accgcctgac
    11161 cgccctatat gcacaaaaac aaggcgtgga atggcacgat gaagaaaacg tttccgcact
    11221 tgccaaaaaa ctgcccgccg tattttcagg caaccgcatc ctacttgatg gcgaagacgt
    11281 ttcagacggc atccggacag aagccatcgg tatgggcgca tccgcagttg cgcaatggcc
    11341 caaagtccgc gccgcactgc tgcaacgcca acgcgatttt ctgaccgaaa aaggactggt
    11401 tgccgacgga cgggacaccg gatcggtcgt cttcccccaa gccgaactca aaatttttct
    11461 gacagccgaa tctaaaatcc gtgccgaacg ccgcgccaaa caaatcggca ttccctgcga
    11521 aggtttcaca ttcgagcgca tcctgtccga catcgagacc agagacgaag cagaccgaaa
    11581 ccgcaaggtt gcccccctga aacaacagtc cgatgccctg cttttggata cgagccgcct
    11641 aactatagaa gaaactgtaa aaaaagtgct tgattggtat cgtaaagttt aaattttcag
    11701 gtataatcgc ccgcattgcg cttcagacag catgaatttc catgtgccgt ctgaaacctt
    11761 atttacccgc ctgccgtgcc aaggactgca gacacccacc aacccaaccc gcaccccttg
    11821 gcggtgtacc gaaaagagtt atatatgtct atggaaaatt ttgctcagct gttggaagaa
    11881 agctttaccc tgcaagaaat gaacccgggt gaggtgatta ccgctgaagt agtggcaatc
    11941 gaccaaaact tcgttaccgt aaacgcaggt ctgaaatcag aatccctgat cgatgtagct
    12001 gaattcaaaa acgctcaagg cgaaattgaa gttaaagtcg gcgacttcgt taccgttacc
    12061 atcgaatccg tcgaaaacgg cttcggcgaa accaaactgt cccgcgaaaa agccaaacgc
    12121 gcagccgatt ggatcgcttt ggaagaagcc atggaaaacg gcaacatcct gtccggcatc
    12181 atcaacggta aagtcaaagg cggcctgacc gttatgatca gcagcatccg cgcattcctg
    12241 ccgggttctt tggtcgacgt acgtcccgtt aaagacactt cccattttga aggcaaagag
    12301 atcgaattca aagtgatcaa actggacaaa aaacgcaaca acgtcgttgt ttcccgccgc
    12361 gccgttttgg aagccacttt gggtgaagaa cgcaaagccc tgctggaaaa cctgcaagaa
    12421 ggctccgtca tcaaaggcat cgtcaaaaat atcaccgact acggcgcatt cgttgacctg
    12481 ggcggcatcg acggcctgct gcacatcacc gatttggcat ggcgtcgcgt gaaacacccg
    12541 agcgaagtct tggaagtcgg tcaggaagtt gaagccaaag tattgaaatt cgaccaagaa
    12601 aaacaacgtg tttccttggg tatgaaacaa ctgggcgaag atccttggag cggtctgacc
    12661 cgccgttatc cgcaagccac ccgcctgttc ggcaaagtat ccaacctgac cgactacggc
    12721 gcattcgtcg aaatcgaaca aggcatcgaa ggtttggtac acgtctccga aatggactgg
    12781 accaacaaaa acgtacaccc gagcaaagtc gtacaactgg gtgacgaagt cgaagtcatg
    12841 attttggaaa tcgacgaagg ccgccgccgt atctctttgg gtatgaaaca atgccaagcc
    12901 aatccttggg aagaatttgc cgccaaccac aacaaaggag acaaaatctc cggtgcggtt
    12961 aaatccatta ccgatttcgg cgtattcgtc ggcctgcccg gcggcatcga cggtctggtt
    13021 cacctgtccg acctgtcttg gaccgaatcc ggcgaagaag ccgtacgcaa atacaaaaaa
    13081 ggagaagaag tcgaagccgt cgtattggca atcgatgtgg aaaaagaacg catctccttg
    13141 ggtatcaaac aactggaagg cgatcctttc ggcaacttca tcagcgtgaa cgacaaaggt
    13201 tctttggtta aaggttccgt gaaatctgtt gacgccaaag gcgctgttat cgccctgtct
    13261 gacgaagtag aaggctacct gcctgcttcc gaatttgcag ccgaccgcgt tgaagacttg
    13321 accaccaaac tgaaagaagg cgatgaagtt gaagccgtca tcgttaccgt tgaccgcaaa
    13381 aaccgcagca tcaaactttc cgttaaagcc aaagatgcca aagaaagccg cgaagcactg
    13441 aactccgtca atgccgccgc caatgcgaat gccggtacca ccagcttggg cgacctgctg
    13501 aaagccaaac tctccggcga acaagaataa ggttgcagac atgacaaagt ctgagttaat
    13561 ggttcgcttg gcagaagtat ttgccgccaa aaacggcacg catcttctgg caaaagacgt
    13621 agagtacagc gtaaaagtct tggttgacac catgacccga tcgcttgccc gaggtcaacg
    13681 catcgaaatc cgcggtttcg gcagcttcga tttgaaccat cgtcctgccc gcatcggtcg
    13741 caatcccaaa accggcgagc gcgtggaagt acctgaaaaa catgtacccc acttcaagcc
    13801 tggtaaagaa ttgcgcgagc gggtcgactt ggctttaaaa gaaaatgcca attaaacctt
    13861 agcatcaaaa cgccgctggt acgcggcgtt ttttctttgg tttaacttca tccgctgctt
    13921 caatacctta agccaagcaa gcaacggatt agagcgtgga ttttttacca ttgcttacaa
    13981 tccgcttttt aaacaacaaa ttgttgattt ctattacgaa caggacaaaa tcctgcttat
    14041 tgcactaaaa ctaagccgtt tcaggaattt gcggcaaatt tacagctttt accgagccta
    14101 atgctttcgc tttttggtaa aacgccaatt tgtattcaag caaatctaaa taacgtttta
    14161 attcggcaat ttgacacttc acattttcta tttgattttc aaacaaggaa aggcgttctt
    14221 caatggtatc gtcgccaatg acggtacatt ccgcaaagcg tttgatgtct tttaagctca
    14281 ttcccgtatt tttcaagcat tgcaataagt acaaccattg caaatcgtta tcggtaaaac
    14341 aacggttacc gtattcatca cgtccgatat taggcaacaa gccttctttg tcgtaaaagc
    14401 gtaaagtgtg ggcggagatg cctatttttt cggcagcttt ggcagtggta taagtcattt
    14461 tccctccctc taaacaaaaa acggtaaaaa aacacttgcc ttagagtgaa ctctaaaatg
    14521 taaactgttg ctatgttgct caggcaaggc tattttgtta atgaattaag aggaaagaca
    14581 atggaaatga aacaaaccga ttcaaccatc aaatctcgtg cggcggtggc attcgcccct
    14641 aaccaaccct tacaaattgt ggaaatcgac gtggaaatgc cgcgtaaaga cgaggtgtta
    14701 attcgtaaca cccacactgg cgtgtgccat actgatgcat ttaccttatc aggaagcgat
    14761 cctgaaggcg tattccctgt ggtgcttgga cacgaaggtg cgggtgtggt cgttgctgtg
    14821 ggcgagggtg tgtcaagcgt aaaaccgggt aatcacgtca ttccgcttta caccgcagaa
    14881 tgtggcgaat gtgagttttg cctctcgggt aaaaccaatt tatgcgtctc agtgcgtgat
    14941 acacaaggta aaggcttaat gccagacggc acgacgcgtt tttcttatca aggtcagccg
    15001 atttatcact atatgggctg ttcgactttc agtgaatatt ctgttgttgc cgaagtttca
    15061 ctggcgaaaa tcaacccgaa agccaaccac gaacaagtat gtttgctcgg ctgcggcgtt
    15121 accactggta ttggtgcggt acataacacg gcaaaagtac aagaaggcga ttctgttgcc
    15181 gtgtttggct tgggagcgat tggtttggct gtggtgcaag gtgcgcgtca agccaaagcc
    15241 ggtcgcatta tcgccattga taccaatcct gcaaaattcg agttggcaaa acagtgttgg
    15301 tgcaactgac tgtttgagcc cgaaagatta cgataaacca atcaaagatg tgttgttaga
    15361 cgtcaacaaa tggggcattg accacacctt tgaatgtatc ggcaatgtaa acgtaatgcg
    15421 tcaggcatta gaaagtgcac accgaggttg gggacaatcc atcatcatcg gcgtagcgga
    15481 tgcaggacaa gaaatttcaa cgcgtccgtt ccaatcggta acaggccgtg tttggaaagg
    15541 ctcggcattt ggtggtgtta aaggccgctc cgagcttccg aaaatggtgg aggattcaat
    15601 gaaaggcgat atccaattag aaccatttgt gacccatgca atgacccttg atcaaatcaa
    15661 tgaagccttt gagttaatgc acgaaggtaa atcgatccgc gctgttattc attactaagg
    15721 tccacgatga aactgattga acaacatcaa atttttggtg gttcgcaaca agtttgggcg
    15781 catcatgccc aaacgcttca atgcgaaatg aaatttgccg tctatttgcc ggataatccg
    15841 gaaaatcaac cgcttggtgt gatttattgg ctttccggct tgacgtgtac ggaacaaaat
    15901 ttcattacca aatcgagctt ccggcgttat gcggcagaac atcaagtggt tgtggtcgcc
    15961 cccgataccg gccctcgcgg agagcaagtg ccgaacggtg ccgcttatga tttaggacag
    16021 ggggcaggct tttatttgaa tgcgaccgaa cagccttggg cggcgaatta tcaaatgtat
    16081 gattacattt tgaacgagtt gccccgtctg attgaggagc attttcctac caacggcaaa
    16141 cgttccatta tggggcattc gatggacgga cacggcgcat tggtattggc actacggaat
    16201 cgggaacatt atcaaagtgt ttctgccttt tcgcctattt tatcgccaag cctcgtaccg
    16261 tggggagaaa aagcctttac tgcttattta gggaaagacc gtgaaaaatg gcagcaatat
    16321 gatgctaact cactcattca acaaggctat aaagtgcaag gtatgcgtat cgatcagggc
    16381 ttggaagatg agtttttgcc gacacaattg cgtaccaaag attttatcga aacctgtcgt
    16441 gcggcaaatc agccaatcga tgtgcgtttc cataaaggat acgatcacag ctattacttc
    16501 atcgccagtt ttattggtga gcatatcgct tatcacgccg catttttgaa gtaagtcaaa
    16561 gagcggtcag ttttcaaagc agtttggaat agccggcacg agggcggtaa gaagtgccgg
    16621 cataaacgta tgccgcctga accggaagga gccggcccta cggattacca aaccctgccc
    16681 ttgatttgat tagtatgatt tttaagctta aaccctgatt gatcaaacat taaaatcgcc
    16741 cgtatttcct acttcacttt cgggcttcgt attattcgtt gccgaatttg cataagcaac
    16801 ctgttcctgt tgtgttttcg ccccctccaa gctgacggtg gcgtaacagc ttcgcgattc
    16861 accatctgtt tcatttgtcc tccttcaata ttaaaacgca gcctgaaata aaaggcattt
    16921 tggctcatat ctgcaccata ttaaaacgcc gcctttgctt ataccccctt tgtgcgcgtc
    16981 attattcttt tccacgggaa acgccaagtt tgaaggaaat catttataat accagcggta
    17041 agcattttct ttcttagccg caagaagtat aacaaggtta aatatgaata atagagacca
    17101 actttttaaa gccccgccgt ttgaaaacca cagcccgctg acctggtatc aggctgcctc
    17161 acaactgccc aacttcatcc gcgacgacgc acaggcggcc gccatcgaac accttgaccg
    17221 gctttggacc gaattgatga tgttcaaacg caaaagaaac cgttttttag gcaggagttt
    17281 gcgttccccg caagttccca aagggcttta tttctatggc ggagtcggac gcggcaagag
    17341 ctttctgatg gacgcttttt tcggctgcct cccttaccgc cgcaaacgcc gcgtccactt
    17401 tcatgccttt atggcggaaa tccaccggcg gctgaaagcc ctgaaaagcg aaagcaaccc
    17461 gttgaaatcc gttgccgccg agattaccaa agaaacccga gtattgtgtt ttgacgaatt
    17521 tcatgtcagc gatattgcgg atgcaatgat tttaggccgt ctgctggaaa acctgcttaa
    17581 cgagggcgtt gttttggtgg cgacttcaaa ctacgcgcct tccgaactct acccgcaagg
    17641 tcaaaaccgg agcggttttc ttcccacaat cgcgctcatc gagtccagtc tgaccgtctt
    17701 aaacgttgac ggaggggaag actaccggct gcgtaccctc cgccccgccg agattttctt
    17761 tacgcctgcc aatgaagaaa atgaggcaaa actggcaaaa ctgttcaaag aaatgacagg
    17821 cattaccgat ttgaaccccg gcatcagcac catccacggc cgggaaattc cccacaaagc
    17881 cgagtccggt cgtaccatat ggtttgattt ccgcgcactg tgcttcagtc cccgctcaca
    17941 gtccgactat ctgtatttgg ccgaacatta tgaaatggtt tttatttcag gtttggaaca
    18001 actctcaccg caagaaaagg cggaggcgcg acggctgact tggctgattg acgtactcta
    18061 cgatttccgg gtcaaactgt gtgccaccgg cgcggtagat gtcaaccata tctacacgga
    18121 aggcgatttt gccgaagaat ttacccgcac cgccagccgg atggtcgaaa tgcagtccga
    18181 agtttatttg gaacagccgc acctgacctt atctcccaag gcttcaggcg gataagttat
    18241 ttttttggta gaataccgat ttgattcttc ttaagtaaaa ataaggatat agcatggcga
    18301 ttgaacgtac catatccatc atcaaacccg atgccgtcgg caaaaacgtt atcggcaaaa
    18361 tatacagccg ctttgaggag aacggtctga aaatcgttgc cgccaaaatg aagcagctta
    18421 ccctcaaaga agcccaagaa ttttatgcgg ttcataaaga ccgccccttc tatgccggat
    18481 tggttgaatt tatgaccggc ggtccggtta tgattcaagt actggaaggc gaaaacgccg
    18541 ttctgaaaaa ccgcgaactg atgggggcga ccaatcccac cgaagccgca gaaggcacga
    18601 tacgcgcgga ctttgccact tcggtcagca ttaacgccgt acacggttcc gacagtgtgg
    18661 aaaatgccgc tttggaaatt gcctactttt tcagccaaac cgaaatctgc ccccgttgat
    18721 acaatacacc gcccaattcc tattcagacg gcataaaata tatccatgcc gtctgaaaac
    18781 tctgttgcaa aagacttcaa atcaaacttg cctgccctgc aattttttat ttgaagcctt
    18841 aatttaagaa aaacacaaat acatgaaaac caatctgctc aactacgacc ttcaagggct
    18901 aacccgacat tttgccgata tgggtgaaaa accattccgc gccaaacagg ttatgcgttg
    18961 gatgcaccaa tccggcgcgc aaaattttga cgaaatgacc gatttggcaa aatcgttgcg
    19021 ccataaactg aacgaacagg caagcatcga aattcccaag ctgatgatgt cccaagaatc
    19081 ttcagacggc actcgaaaat ggcttttgga tgtcggtacg gggaacggcg tggaaaccgt
    19141 cttcatcccc gaatcggatc gcggcacgct ctgcatttcc tcgcaagtcg gctgcgcttt
    19201 ggaatgtaca ttttgttcga ccggccggca gggcttcaac cgcaatttaa ccgctgccga
    19261 aatcatcgga cagttgtggt gggcaaacaa agcgatgggc gttacaccga aaaacgagcg
    19321 tgtgatttcc aacgtcgtca tgatgggcat gggcgagccg atggcgaact tcgacaatgt
    19381 cgttaccgcc ttgagcatca tgctggacga ccacggctac ggtttgagcc gccgccgcgt
    19441 aaccgtttcc acttcgggta tggttcccca aatggacagg ttgcgcgatg tcatgccggt
    19501 ggccttggcg gtttccctcc acgcttccaa tgacgaagtc cgcaaccaaa tcgtaccgtt
    19561 gaacaaaaaa tatcccttga aagaattgat ggccgcatgc caacgctatc tggtcaaagc
    19621 gcccagggat ttcatcactt tcgagtatgt gatgctggac ggtgtcaacg ataaggcaca
    19681 acatgcatac gaacttattg aactggtcaa agatgttccc tgcaaattca atttaatccc
    19741 gtttaatcct ttccctaatt cgggatatga acgttcaagt aacgaaaaca tccgtatttt
    19801 cagagatatc ctgcaacaag ccgaatttgt cgttaccgtt cgaaaaactc gtggcgacga
    19861 tatcgatgcc gcctgcggac agttggcagg tcaggttcag gataaaacgc gccgccaaca
    19921 aaaatggcag cagattttaa tcggacaaca ggggtaatta tgccttttaa gccatccaaa
    19981 cgaatctctt tattacttgt tcttgccttg ggcgcgtgca gcacttccta ccgcccctcg
    20041 cgggcagaaa aagccaatca ggtttccaat atcaaaaccc agttggcgat ggaatatatg
    20101 cgcggtcagg actaccgtca ggcaacggca agtattgaag atgccttgaa atcgaaccct
    20161 aaaaacgaac ttgcctggct ggtccgtgcc gaaatctatc aatacctgaa agttaacgac
    20221 aaggcgcagg aaagtttccg gcaagccctc tccatcaaac ccgacagtgc cgaaatcaac
    20281 aacaactacg gctggttcct gtgcggcagg ctcaaccgcc ctgccgaatc tatggcatat
    20341 ttcgacaaag ccctggccga ccccacctac ccgacccctt atattgccaa cctgaataaa
    20401 ggtatatgca gcgcaaaaca ggggcaattc ggattggcgg aagcctattt gaaacgttcc
    20461 ctcgccgccc agccgcagtt cccacccgca tttaaagaac tggcgcgcac caaaatgctg
    20521 gccgggcagt tgggcgatgc cgattactac tttaaaaaat accaaagcag ggtagaagtc
    20581 cttcaggccg atgatttgct gctaggctgg aaaattgcca aagccctcgg caacgtgcag
    20641 gcggcatacg aatatgaagc acaattgcag gcaaatttcc cctactcgga agaattgcaa
    20701 accgtcctca ccggtcaata aacagattca aaccatatga acacactcca acgccgcaag
    20761 acgcatcaag tcctcatcga tcatatcacc gtcggttcag aagcacccgt cgttatccaa
    20821 tctatgacca acaccgacac tgccgatgca aaagccaccg cattgcagat taaggaattg
    20881 agcgatgccg gctcggaaat ggtgcggatt accgtcaaca gccccgaagc cgcgtccaaa
    20941 gttgccgaaa tccgccgccg cttggacgat atgggctatg ccacaccact gattggcgat
    21001 ttccatttta acggcgaacg cctgttggcg gaatttcccg aatgcggcaa agcattgtcc
    21061 aaataccgca tcaatcccgg caatgtcggc aaaggcgtaa aaggcgatga aaaatttgcc
    21121 tttatgattc ggactgctgc tgaaaacgat aaagccgtcc gtatcggcgt aaactggggt
    21181 tctttggatc agagcctcgc caaacgtatg atggatgcca acctcgtttc ttccgcgccg
    21241 aaaccgcccg aagaagtgat gaaggaagca ctgattgtct ccgctttgga atctgccgaa
    21301 aaagccgttc tattgggact gcccgaagac aaaatcatcc tgtcgtgcaa agtcagcgcg
    21361 gttcatgatt tgattcaggt ttaccgcgaa ctgggcagcc gttgcgtcta tccgctgcat
    21421 ttgggtttga ccgaagccgg tatgggcagc aaaggcattg tcgcatcaac ggcggcatta
    21481 tctgttttgc ttcaagaagg aattggcgac accatccgca tttcactcac tccggaaccg
    21541 ggcagcccgc gtactcagga ggtcgtcgtc gggcaagaga ttttacagac tatgggtttg
    21601 cgctcgttta cgccgatggt taccgcctgc ccgggatgcg ggcgtaccac cagtaccgta
    21661 tttcaagagc tggcacaaga tgttcaaaat tacctgcgcc aaaaaatgtc tatatggcgt
    21721 accctttatc ccggggttga atccctgaac gttgccgtaa tgggctgcgt tgtcaatggc
    21781 cccggagaaa gcaaattggc cgacatcgga atcagccttc ccggtacggg ggaaacaccc
    21841 gtcgcacctg tttatgtaga tggggagcgc aaagtcacac tgaaaggtaa taatattgca
    21901 agcgaattcc tagctattgt agaggaatat gttaaaacca attatggcaa aaacagttct
    21961 aaacgcaata aaggaaaagt catcccgata cagtctctat aaaacaaatg ccgtctgaac
    22021 gtttcagacg gcatttgttt ctctcagatt tcttattaaa gccgcaaaga agcgcggttt
    22081 tccaaaactt ggtcgatcaa accatattct tttgcttctt cggcagacat gaaattatca
    22141 cggtcggtgt cgcgctccaa atctgccaaa tcgcggccgc aatgtttcgc catcaggcgg
    22201 ttgagttttt ctttgatttt caacaactcg cgtgcgtgga tttcaatgtc ggatgcctga
    22261 ccgcccaagc cgccgctgat taaaggctgg tgaatcataa tccggctgtt gggcagggcg
    22321 aaacgtttgc ctttctcgcc tgccgacaat aagaacgcgc ccatacttgc cgcctgcccc
    22381 aagcacaaag tcgatacatc gggcttgatg aaattcatcg tgtcgtaaat cgacataccg
    22441 gccgttaccg agccgccggg ggaattgatg tagaagaaaa tatccttatc cggattctca
    22501 ctttccaaaa acaacagttg ggcgaccacc agattagcag actcatcggt taccgggcca
    22561 accagaaata cgatgcgctc tttcaaaagc cgggaataga tatcgaatgc acgctcaccg
    22621 cgaccgctct gctcgataac ggtagggaca agatggttat caaaagacat ttcgtctcct
    22681 ttcatgatgg aaaagcacca aagcgggctt taaaaacggc ttcggtgctt tcaaaaactg
    22741 ccttcagaca gcattttcag aacaatcagg cttgcgcgcc catcacttcg tcaaaagaca
    22801 aagctttttt gtttactttg gctttgccca aaacgaaatc aacaacgttg ctttctactg
    22861 ccaaagaagt cggggcttgc aggcgggaag tatctgcgta gtaccagtca atcacttctt
    22921 gaggatcttc gtagctttct gcgaagttgg cgacaacggc tttgatttgc ccttcagtcg
    22981 gttccagttt gttttcgtca accagtttgg ccaaaatcag acccaaagat acgcgacgtt
    23041 cggcttgttc tttgaacata tccaaaggca aatccaagtt cgcggcatcg gtcatacctt
    23101 ggttaacgaa gttttgtttc atttcgtttg ccaggcgggc ggcttcttca ttgaccaaag
    23161 caaccggaac tttcaactct acggctttaa tcagcgcgtt cattacggat tctttggttt
    23221 gttcgttcac gcggcgttcc acttcgcggc ttacgttttt cttcacttct tcacgcattt
    23281 tggcaacatc gccatccgca atacccaagg cttttgcaaa atctgcatcg acttcaggca
    23341 gagtgggctc ggaaacattg ttcagcgtaa tggtgaacac ggcagtttta ccggcaacat
    23401 ctttgccgtg gtattcttca gggaagttga cggtaacgtc tttactttcg cccgctttca
    23461 tgccgactac gccggcttca aattcaggca gcatttgacc tgcgcccaat acgaaggcgt
    23521 agtttttgga tgcgccgccg gcaaaaggtt cgccgtcgat tttgccttca aagtcgatga
    23581 tgacgcggtc gccgtttcgg gcttcgcggt caacatggtt gaagcgggta cgttgtttac
    23641 gcaggatttc tacagtttgg tcgacttcgg catcgccgac ggaagcggtt actttttcga
    23701 cctcttgtgc agacaaatcg ccgataacga cttcggggaa cacttcaaaa atggcggcaa
    23761 ctttgaaaga ctctttatcg tcttgttctt caacgccttc aaaacgtgga tagcctgcca
    23821 ctttcaactc ttgggcaacg gcaacatcgt agaagcggcg ttgcaccagc tcgttgatca
    23881 cgtcgttttg cgcgctcgca ccgtacattt gggcaatcat ttttaaaggt gctttacccg
    23941 gacggaaacc gtcgattttt gcacggcgtt gggtttgttt cagtttttta tcggtttctg
    24001 cgttgatttc ggaccaaggc agggacaaca ctactttgcg ttccagattt tctaaaattt
    24061 caacagttac gctcatcata agcccttaaa tttgttgtgt tgataaaatg ataaaccttc
    24121 ttccctacat ggggaagcaa acagcgcaac ggtacgatat ttgaaccgca ttgccgcaaa
    24181 ggggaaattt tagctggcaa gtatatcaca atgtttcgcc tgaaacataa tatgccgaga
    24241 cctttgcaaa attcccctaa aatcccctaa attcccacca aggcatttag gggatttccc
    24301 atgagcacct tcttcc
//
LOCUS       DAXFZM010000019        24300 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.019, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000019 DAXFZM010000000
VERSION     DAXFZM010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 24300)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24300)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24300
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.019"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            166..390
                     /locus_tag="ACFJAG_000683"
     CDS             166..390
                     /locus_tag="ACFJAG_000683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980039.1"
                     /translation="MMKNKYILIKAAIGITAISIFYLLTQESSGKTEEPSYFLMFMFL
                     NLLWFEENKTVMAAATAMIAAHFIFVALSD"
     gene            446..1102
                     /locus_tag="ACFJAG_000684"
     CDS             446..1102
                     /locus_tag="ACFJAG_000684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HFC3980040.1"
                     /translation="MEQKRRFAASLLLAAALPLCAHSFPFAEENPIAYGKVKIQSWKA
                     RRDFNIVKQDLDFSCGAASVATLLNNFYGQTLTEEEVLEKLGKEQMRASFEDMRRIMP
                     DLGFEAKGYALSFEQLAQLKIPVIVYLKYRKDDHFSVLRGIGGNTVLLADPSPGHVSM
                     SRAQFLDAWQTREGNLAGKILAVVPKKAETISNKLFFTHHPKRQTEFAVGQIRQGRAE
                     "
     gene            1230..2525
                     /gene="hisS"
                     /locus_tag="ACFJAG_000685"
     CDS             1230..2525
                     /gene="hisS"
                     /locus_tag="ACFJAG_000685"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004821 - histidine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006427 - histidyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HFC3980041.1"
                     /translation="MAQKIQSVKGMNDLLPVGQKDFKLTAVFWQAFEDTVNRWTRAYG
                     YQQIRTPIVEQTGLFVRSIGEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVE
                     HNLLYNSPQKLWYMGPMFRRERPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLW
                     EKLGIREYLTLEINSLGNREERAAHRAALVEYLTRYEAQLDEDSKRRLKTNPLRVLDT
                     KNPDLQEICNAAPRLVDYLGEASQNHYARFKAMLDGLGIQYIENSRLVRGLDYYNQTV
                     FEWTTDKLGAQATVCGGGRYDGLIEELGGKPAPSIGFAMGIERLLLLVSEYGSLEVNA
                     APDVYAMHQGEGADLQVMKYAQALRAQGFNVIQHSGYQSLKAQMKKADNSGARFALIV
                     AQDELADGTVTLKDMNGAHGQQTVSATDLTDTLQQWKNA"
     gene            2526..3155
                     /locus_tag="ACFJAG_000686"
     CDS             2526..3155
                     /locus_tag="ACFJAG_000686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfgM family protein"
                     /protein_id="HFC3980042.1"
                     /translation="MAAHLEEQQELDNFKYFWKTTGKWLFALLILAALGYLGYTVYQN
                     RAASQNQEAAAVLANIVEKAQNKAPQSEINAELSKLQQSYPHSISAAQATLMAAATEF
                     DAQRYDVAEGHLKWVLSNQKDSLIQALAAQRLGVVLLQQKKYDAALAALDTPVEADFA
                     PLLMETKGDVYAAQEKSQEALKNYGQALEKMPQDSVGRELLQMKLDSLK"
     gene            3305..4762
                     /gene="der"
                     /locus_tag="ACFJAG_000687"
     CDS             3305..4762
                     /gene="der"
                     /locus_tag="ACFJAG_000687"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003745900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HFC3980043.1"
                     /translation="MKPTIALIGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGH
                     GKVGSKPYFVIDTGGFEPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKI
                     IADRLRQSPRPVYLAVNKGEGGDRAVLAAEFYELALGEPHVISGAHGDGVYYLIEEIL
                     ENFPEPEAEEADAKHPVFAVIGRPNVGKSTLVNAILGEKRVIAFDMAGTTRDSIHIDF
                     EREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDA
                     TIAGFALEAGRALVVAVNKWDGISEERREQVKRDISRKLYFLDFAKFHFISALKERGI
                     DGLFESIQAAYNAAMIKMPTPKITRVLQTAVGRQQPPRAGLVRPKMRYAHQGGMNPPV
                     IVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRIQYNVSENPYENAEDKPKKKPLR
                     RVSLSNRIEKREGRKEEKNRFKKKTKVSVKKQFSK"
     gene            4793..5692
                     /locus_tag="ACFJAG_000688"
     CDS             4793..5692
                     /locus_tag="ACFJAG_000688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-associated protein RdgC"
                     /protein_id="HFC3980044.1"
                     /translation="MWFKQISFYPLNKEKLPEADVLADKLAEAEFTHCQGLDWFSEGF
                     TAPVSFSPELVFPADFTLRVALKKEEKVLPAGVIRDILEEKVAEIQNNEARNVGRKEK
                     QELKEQITDDLLPRAFTRSSRTEAVFNTRHGYLLVNNAASAKAENILTKLREALGGLE
                     ASLPNTKQSPSSLMTGWLLQGHCEGGFELDSDCELKGTGDIVPVVKVSKQDLTADEVV
                     QHVKNGKTVTRLGLVWREQIAFILTQDFTLKRIQYLDVLQEEAESNGDDAAGLAFASQ
                     ILMAESVSTMLEELVSYLGGWQD"
     gene            5744..6161
                     /locus_tag="ACFJAG_000689"
                     /pseudo
     CDS             5744..6161
                     /locus_tag="ACFJAG_000689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449185.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            6228..6794
                     /gene="dcd"
                     /locus_tag="ACFJAG_000690"
     CDS             6228..6794
                     /gene="dcd"
                     /locus_tag="ACFJAG_000690"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003823864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008829 - dCTP deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0006229 - dUTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HFC3980045.1"
                     /translation="MSIKSDKWIRRMSEEFGMIDPFEPNQIKEADGQRIISYGTSSYG
                     YDIRCANEFKIFTNINSTIVDPKNFDPKNFVTVEDDCCIIPPNSFALARTVEYFRIPR
                     NVLTVCLGKSTYARCGIIVNVTPFEPEWEGYVTLEFSNTTPLPAKIYAGEGVAQVLFF
                     ESDEVCETSYKDRNGKYMGQTGVTLPKA"
     gene            complement(6860..7564)
                     /locus_tag="ACFJAG_000691"
     CDS             complement(6860..7564)
                     /locus_tag="ACFJAG_000691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248833.1"
                     /note="The SIMPL domain is named for its presence in mouse
                     protein SIMPL (signalling molecule that associates with
                     mouse pelle-like kinase). Bacterial member BP26, from
                     Brucella, was shown to assemble into a channel-like
                     structure, while YggE from E. coli has been associated
                     with resistance to oxidative stress; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="HFC3980046.1"
                     /translation="MLRSVLAASLLAVSFPAAAEALNYNIVEFSESAGIEVAQDTMSA
                     RFQVAAEGRDKNAVNAEFVKKFNNFTRKSKNGSFKTELVSRSAMPRYQYTNGRRIQTG
                     WEERAEFKAEGRDFDALNRFIADVQTDASLEDTDFSVSRERRNEVIDQVSKDAVLRFK
                     ARAEKLAGVLGASGYKIVKLNFGQIGSHIAGDGAVRAKMLRAMPMAASVNMKGTDSAA
                     PGVEEISISINGTVQF"
     gene            7708..8903
                     /locus_tag="ACFJAG_000692"
                     /pseudo
     CDS             7708..8903
                     /locus_tag="ACFJAG_000692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678130.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
     gene            8929..9882
                     /locus_tag="ACFJAG_000693"
     CDS             8929..9882
                     /locus_tag="ACFJAG_000693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HFC3980047.1"
                     /translation="MTHTVHLHLEETDNPTLQRLCGSFDSNLDSLAKALDIHISRRFE
                     HFTFNGAFAHAGKRALLKLLETAQTRDLNDSIIRLAAVETQTEDAGHQEKNHEHAYYF
                     RTKRGSIGGRTPRQNGYIRALLDHDIVFGLGPAGTGKTYLAVAAAVDAMEKHQVERII
                     LVRPAVEAGEKLGFLPGDLTQKVDPYLRPLYDALYDLMGFDRVTKLIEKGLIEITPLA
                     YMRGRTLNGAYIILDEAQNTTPEQMKMFLTRIGFGAKAVITGDTSQIDLPKNIKSGLK
                     DAREKLHGVAGLYFHTFTGEDVVRHPLVQKIVEAYESAEHD"
     gene            complement(9987..10310)
                     /locus_tag="ACFJAG_000694"
     CDS             complement(9987..10310)
                     /locus_tag="ACFJAG_000694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980048.1"
                     /translation="MKKCILGILTACAAMPAFADRISDLEARLAQLEHRVAVLESGGN
                     TVKIDLFGSNSTMYVCSVTPFQKTFEASDRNEGVARQKVRQACNRETSAMFCGDEAIR
                     CRKFD"
     gene            complement(10483..11841)
                     /locus_tag="ACFJAG_000695"
     CDS             complement(10483..11841)
                     /locus_tag="ACFJAG_000695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polynucleotide adenylyltransferase PcnB"
                     /protein_id="HFC3980049.1"
                     /translation="MLKKWLNKMLPSGRSSKKAESKTVIPAERHNIRAEMLSFAAENV
                     IRRLKGAGFQAYVVGGAVRDLLLGIEPKDFDVATDATPEQVHKLFRRSRIIGRRFQIV
                     HVMNGAEIIEVTTFRGGAKVHQNAHGRIMKDNTYGSIEEDAMRRDFTCNALYYDPEKE
                     EILDFHNGIADVAARRLVMIGNAAERYQEDPVRILRAIRLSGKLGFELSEETAAPIAE
                     SICRLKHEPVARLFDEIMKLLFSGHARECLKRLNGFDIPDIHPLLNALRVSDGIAGKM
                     TALALKNTDERLRADKSVSVGFVLAALMWPELDRHWKSNLQQGLKPTPALSDAINTMR
                     ETVERGWGVPQRFSATMREIWMFQPQFENRKGARPHKLFAQARFRAAYDFLLLRAETG
                     NADRALAEWWTAFQTASAEQRTEMTKNEAAARHEKNEGQEKKRRRRRRKPKPKVVGTD
                     WE"
     gene            complement(12199..13899)
                     /gene="recJ"
                     /locus_tag="ACFJAG_000696"
     CDS             complement(12199..13899)
                     /gene="recJ"
                     /locus_tag="ACFJAG_000696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008409 - 5'-3' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HFC3980050.1"
                     /translation="MSVKIQTRPVNTDVFNHLLAAGADPLIARLCASRGVQSPAELDD
                     KLASLLPYQSLTNCEAAAGRLADAVERKEKILIVADYDADGATACAVGLDGLAAMGAK
                     VDFLVPNRFEHGYGLTPELAEIAAAQGVDLLITVDNGIASIAGVARAQALGLDVIVTD
                     HHLPADTVPDCIIVNPNQKGCGFPSKSLAGVGVIFYVLTALRAELRRRNYFSDGIKEP
                     NLGGLLDLVALGTVADVVPLDHNNRILVSQGLKRMRSGKMRPGIRALFEVARRDWRKA
                     QPFDMGFALGPRINAAGRLDDMSVGIACLLARDDSEAQELAARLNNLNIERREIEQSM
                     LRDALNAFPETLPSGQTTLVAYRDDFHQGVVGIVASRLKDRFYRPTIVFAPADNGEVR
                     GSGRSIPNLHLRDALDLVSKRHPDLILKFGGHAMAAGLSILEHNIPAFQTAFEEAVRE
                     MVCEDDLSQTYITDGSLPACDITLEQAQNLACHVWGQGFAPPSFTDEFHVVRQQPLGA
                     EGKHKKAWLQKDGCEFEAMFWRCSEDIPEYIRTVYRPVANEWRDNLELQLYIDYWEAA
                     "
     gene            complement(13951..14682)
                     /locus_tag="ACFJAG_000697"
     CDS             complement(13951..14682)
                     /locus_tag="ACFJAG_000697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980051.1"
                     /translation="MLFRKTTAAVLAATLILNGCTMMLRGMNNPVSQTITRKHVDKDQ
                     IRAFGVVAEDNAQLEKGSLVMMGGKYWFAVNPEDSAKLTGLLKAGLDKPFQIVEDTPS
                     YARHQALPVKFEAPGSQNFSTGGLCLRYDTDRPDDIAKLKQLEFKAVKLDNRTIYTRC
                     VSAKGKYYATPQKLNADYHFEQSVPADIYYTVTEKHTDKSKLFGNILVYAPLVDIGCG
                     GRGAGLAYGSDCSREFLRQMNGNAV"
     gene            complement(14729..15235)
                     /gene="yjgA"
                     /locus_tag="ACFJAG_000698"
     CDS             complement(14729..15235)
                     /gene="yjgA"
                     /locus_tag="ACFJAG_000698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis factor YjgA"
                     /protein_id="HFC3980052.1"
                     /translation="MFEQEDEWISKTQMKKQMNGLQDLGMELTRLSNDTLKKIGLDED
                     LYEAVVTYKKITSNGALKRQAQFIGRLMRDTDPAPIEAFLAKLRGDDAAHNAFLQRVE
                     QARVRLLADEGALTQFMSDFPNAGAGRLRTLVRNTKKEQEQDKPPKNFRALFQELKTV
                     MENGGAEI"
     gene            15389..16720
                     /gene="pmbA"
                     /locus_tag="ACFJAG_000699"
     CDS             15389..16720
                     /gene="pmbA"
                     /locus_tag="ACFJAG_000699"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease PmbA"
                     /protein_id="HFC3980053.1"
                     /translation="MLFNHTASELLDLCRRTLDLAKAAGATAAEADFSESLGQSVSVR
                     LGEIEQIEFQQDKSLDITVYVGKRKGRAGTADFSEQALRDTVRAAADIARHTAEDGCA
                     GLADPELMAQHIGDPDLYHEWDLDTEAAVGLAKQCEQAALDTDSRIENSEGAAVQTGH
                     YQYVYGNTHGFAAHRQSTHHSISCSVVAADENGMQRDYWYDSACRHPDMDSPETIGQT
                     AARRTLRRLGSRSIPTGSYPVLFDTTVSGGLIGHLVGTLSGGALYRQSSFLIDSIGKK
                     VLPDFLNLREEPHIPRSFRSSYFDAEGVATAPRFVIQNGIVEGYFLGSYSARKLGMQT
                     TGNAGGAHNLYLNHTHETQSDLLKEMGTGLLVTELMGQGANTITGDYSRGAAGFWVEN
                     GVIAYPVHEITVAGRLQDMYRDIVGVADDALRRSSNKIGSILIAGMTVAGS"
     gene            complement(17019..17222)
                     /locus_tag="ACFJAG_000700"
     CDS             complement(17019..17222)
                     /locus_tag="ACFJAG_000700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HFC3980054.1"
                     /translation="MATGIVKWFNDAKGFGFITPDEGGEDLFAHFSAINMEGFKTLKE
                     GQRVSFDVTTGPKGKQAANIQAA"
     gene            17467..17769
                     /gene="clpS"
                     /locus_tag="ACFJAG_000701"
     CDS             17467..17769
                     /gene="clpS"
                     /locus_tag="ACFJAG_000701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adapter ClpS"
                     /protein_id="HFC3980055.1"
                     /translation="MTAQHQSDTLLHRLNTLPPKRYGVFLLNDDYTTMEFVVEILTEI
                     FMLGQEQAVAVMLSVHHEGKGLCGTYTRDIAQTKQQQVMQRAKAEGHPLQCIVEEI"
     gene            17771..20062
                     /gene="clpA"
                     /locus_tag="ACFJAG_000702"
     CDS             17771..20062
                     /gene="clpA"
                     /locus_tag="ACFJAG_000702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009368 - endopeptidase Clp complex
                     [Evidence IEA];
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0043335 - protein unfolding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpA"
                     /protein_id="HFC3980056.1"
                     /translation="MLAPELEQILQQLYREARKAHYEFISLEHLLLVLIEEDAAVPNV
                     LKLCGADLKAVSEQLAASVAENTPLIPDHLLDTVETRPTLGFQRVIQRAMVHTQSAGK
                     GLAEPLDVLVALMSETDSHAVYFLGLQSVTRFEVLRCIAHGSPDEDEDDGNYFSDGMD
                     DDNENRTKPGKNPLSAYTVNLNAEVKAGRIDPLIGRKHEMERLVQILCRRRKNNPLLV
                     GEAGVGKTALADGLAHQIVNDDIPDALKEAEVYALDMGSLLAGTKYRGDFEARVKSVL
                     KQLEKIPHAILFIDEIHTIIGAGSTGGGTMDASNLLKPALAKGSLRCIGATTYDEYRT
                     IFDKDHALSRRFQKIDVVEPTVAETVQILRGLKPMFEAFHQIRYTQGALEAAAELSAR
                     YINERFLPDKAIDVMDEAGAAQRILPKSKQKKVIGKAQIETVIAKVARIPEKTVSHDD
                     KQVLQFLGRDLKNMVYGQENAIDALVAAVKMSRSGLALPDKPIGSFLFSGPTGVGKTE
                     VAKQLAYSMGVPLQRFDMSEYMERHAVSRLIGAPPGYVGFEQGGLLTEAVNKQPHCVL
                     LLDEIEKAHPDIFNVLLQVMDAGKLTDNNGKSADFRNVILIMTTNAGAESLSRPSLGF
                     TAKRERGDEMQAINKLFTPEFRNRLDAIIPFAPLSEPIIVKVVDKFLLQLEHRLLDKK
                     VEAEFTPALRKYLAEKGFDPQMGARPMHRLIQEKIRKPLADELLFGKLADGGFVRIDW
                     DAAKEEAVLKFKKSKVKIKTASA"
     gene            complement(20102..23200)
                     /locus_tag="ACFJAG_000703"
     CDS             complement(20102..23200)
                     /locus_tag="ACFJAG_000703"
                     /EC_number="3.1.21.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009035 - type I site-specific
                     deoxyribonuclease activity [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease subunit R"
                     /protein_id="HFC3980057.1"
                     /translation="MNLETKPIAETPNFIVLDQYEKIEQSGSYQSENRLEAELIADLQ
                     NQGYEYRKDLNSQSRLLENLRAQLQRLNDVAFSDGEWARFLTEYLDRPAENITDKTRK
                     IHDDHIYDFAFDDGRLKNIYLLDKKNLARNHVQLINQFEQTGTHANRYDVTVLVNGLP
                     LVQIELKKRGVAVREAFNQVHRYSKESFNSGNSLFKFLQIFVISNGTDTRYFANTTKR
                     DKNSFDFTMNWARSDNHPIKDLKDFTATFLQKSVLLSVLLHYSVFDANDTLLIMRPYQ
                     IAAAERILWKINSSAQAKNWSGPESGGYVWHTTGSGKTLTGFKAARLATESAFIDKVF
                     FVVDRKDLDYQTMKEYQRFSPDSVNGSESTAGLKRNLEKDGNKIIVTTIQKLNNLMKS
                     EDNLPVYHRQVVFIFDECHRSQFGEAQKNLKKKFKKFCQFGFTGTPIFPENALGAETT
                     AGVFGRELHSYVITDAIRDEKVLKFKVDYNDVRPQFKAVEAEQDEKELSAAENRQALL
                     HPERIREITQYILSRFRQKTHRLNAGGKGFNAMFAVSSVDAAKCYYEAFKTQQAGSLH
                     PLKTATIFSFAANEEQNAVGEIVDETFEPEAMDSSAKEFLQAAINDYNACFKTNFGTD
                     SKAFQNYYRDLAKRVKNREVDLLIVVGMFLTGFDAPTLNTLFVDKNLRYHGLMQAFSR
                     TNRIYDATKTFGNIVCFRDLEQATIDAITLFGDKNTKNIVLEKSYEEYMNGYTDSQTG
                     EARRGYLDVAKELHERFPDPDKIETEKDKKDFAKLFGEYLRAENVLQNYDEFAALREL
                     QNVDAADEDAMKAFQEKYYLSDEDVQEMRKVPMPSERAVQDYRSAYNDIRDWLRRQKA
                     GEQKEQSKIDWDDVVFEVDLLKSQEINLDYILQLVFEHHKKIKGKAELVEEIRRIIRA
                     SIGHRAKEGLIVDFINDTDLDKVPDVPAILETFYTYAQEVMRHEAAGLIAAEGLNETA
                     AKRYLTGSLKRGYASENGTELTETLPKMSPLNPQYLTKKQSVFQKIAAFVEKFAGIGA
                     DI"
     gene            complement(23431..24000)
                     /locus_tag="ACFJAG_000704"
     CDS             complement(23431..24000)
                     /locus_tag="ACFJAG_000704"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF013579.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HFC3980058.1"
                     /translation="MVWKTLGEVAEYSKNRICSDKLNEHNYVGVDNLLQNREGKKLSG
                     YVPSEGKMTEYIVNDILIGNIRPYLKKIWQADCTGGTNGDVLVIRVTDEKVNPKYLYQ
                     VLADDKFFAFNMKHAKGAKMPRGSKAAIMQYKIPIPPLPEQEKIVAILGKFDTLTHSV
                     SEGLPHEIALRRKQYEYYREQLLAFPKAA"
     gene            complement(24030..>24300)
                     /locus_tag="ACFJAG_000705"
     CDS             complement(24030..>24300)
                     /locus_tag="ACFJAG_000705"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HFC3980059.1"
                     /translation="YFLKTQENYFRNIGSKMQMPQIATPDTDNYKIPIPSLETQQKIV
                     KILDKFTELEATLEATLEAELALRKRQYRYYRDLLLDFDNQIGGG"
BASE COUNT         5850 a         6778 c         6023 g         5649 t
ORIGIN      
        1 ttcactcggt gcttcagcac cttagagaat cgttctcttt gagctaaggc gaggtaatgc
       61 cgtaccggtt taaatttaat ccactatata tttatccgat atatcaacat ctctctatct
      121 tattccgaat tttattgttg aaacttgcat taaaaaccat acaagatgat gaagaacaaa
      181 tatattttaa taaaagcagc aatcggcata accgccatat ccatatttta tcttctaact
      241 caagaaagca gcggcaaaac tgaagaacca tcatatttct tgatgtttat gtttctcaac
      301 ttgctttggt ttgaagaaaa taaaacagtt atggctgccg ctacggcaat gattgccgcc
      361 cactttatat ttgtcgcact atccgattaa taagcaaaca aaaaggctgc ttggaaattt
      421 caggcagcct ttcaggagga ttttgatgga acaaaaaagg cggtttgccg cttccctgct
      481 cctcgccgcc gccctgccgc tttgtgcaca ttcttttccc tttgcggaag aaaaccccat
      541 agcctacggc aaagtcaaaa tacaaagctg gaaagcgcgg cgggatttca atattgtaaa
      601 gcaggatttg gatttttcct gcggggcggc ttcggtggcg acgcttttga acaattttta
      661 cgggcaaacg ctgacggaag aagaagtgtt ggaaaaactg ggtaaggaac agatgcgcgc
      721 gtcgtttgag gatatgcggc gcattatgcc cgatttgggt tttgaagcga aaggctatgc
      781 cctgtctttc gagcagctcg cgcagttgaa aatccccgtc atcgtgtatc tgaaataccg
      841 caaggatgat catttctcgg tattgcgcgg cataggcgga aatacggttt tgcttgccga
      901 cccgtcgccg ggtcatgttt cgatgagcag ggcgcagttt ttggatgctt ggcaaacccg
      961 tgagggtaat ttggcaggca agattttggc tgtcgtaccg aaaaaagccg agacaatttc
     1021 aaataaattg tttttcacac atcatcccaa gcggcagacg gagtttgcag tcggacaaat
     1081 caggcaaggg cgcgcagagt aagtcaaatg ccgtctgaaa actgtttcag acggcatttt
     1141 tacccgtccg caaaccatct ccatcctcac aagcccttaa aaatccgcta taatcgcccg
     1201 caatttgatt tcagcacccc ctttttgaaa tggcacaaaa aatccaatcc gtcaaaggca
     1261 tgaacgacct tctgcctgtc gggcaaaaag atttcaaact cacggctgtg ttttggcagg
     1321 cgtttgagga tacggtaaac cgttggacgc gagcttacgg ttatcagcaa atccgtacgc
     1381 cgattgtcga gcaaaccggt ttgtttgtcc gctccatcgg cgaggaaacc gatgtagtcg
     1441 gcaaggaaat gtacaccttc tccgattcaa acgattcttt gagtttgagc ctgcgtcccg
     1501 aaggtacggc ctcttgtctg cgtgcggtgg tcgaacacaa ccttctgtac aacagcccgc
     1561 aaaagctgtg gtatatgggg ccgatgttcc gccgcgagcg tccgcaaaaa ggacgctacc
     1621 gccaatttca tcaggtcggt atcgaggctt tgggttttga agggccggat attgatgcgg
     1681 aaatcatcgc aatgtctgcc gacttgtggg aaaaattggg tattcgcgaa tacctgactt
     1741 tggaaatcaa cagcttgggc aaccgtgagg aacgcgcggc acaccgtgcg gcattggttg
     1801 aatatctgac ccgctatgaa gcgcaactgg acgaagacag caaacgccgt ctgaaaacca
     1861 atcctttgcg cgttttggat acgaaaaacc ctgatttgca ggaaatctgc aatgccgcgc
     1921 cgcgtttggt agattacttg ggcgaggctt cgcaaaacca ctatgcacgc ttcaaggcga
     1981 tgttggacgg tttgggtatt caatatattg aaaattcgcg cttggttcgc ggtttggatt
     2041 attacaatca gacggttttt gagtggacga ccgacaaact cggcgcgcag gcgactgtgt
     2101 gcggcggcgg acgttacgac ggtttgattg aagaactcgg cggcaagcct gcgccgtcca
     2161 tcggctttgc gatgggcatc gaacggctgc tgcttttggt gagcgaatac ggttcgctgg
     2221 aagtgaacgc cgcgcctgat gtctatgcaa tgcaccaagg cgaaggggcg gacttgcagg
     2281 tgatgaaata cgcacaagcc ttgcgcgcgc aaggtttcaa tgtaatacag cattccggct
     2341 atcaaagcct gaaggcgcaa atgaaaaaag ccgacaacag cggcgcgcgc tttgccctga
     2401 ttgtcgcgca agacgaactg gcggacggta ccgttacgct caaagacatg aacggcgcac
     2461 acggtcagca aaccgtttcc gccaccgact tgacagatac tttacaacaa tggaagaacg
     2521 cataaatggc agcccatctc gaagaacaac aagagttaga caactttaaa tatttttgga
     2581 aaaccacggg caaatggctg tttgccctgc tgattttggc ggcactcggc tacttgggat
     2641 acacggttta ccaaaaccgt gcggcttccc aaaatcagga agcggcggcg gtgctggcaa
     2701 acatcgtgga aaaggcgcaa aacaaagccc cgcaaagcga aatcaatgcc gaactgtcca
     2761 aactccaaca aagctacccc cattccattt ccgccgccca agccacgctg atggcggcgg
     2821 caaccgaatt tgacgcgcag cgttacgatg ttgccgaagg tcatttgaaa tgggtgttgt
     2881 ccaaccaaaa agacagcctg attcaggcgt tggcggcgca gcgtctgggc gttgtgttgt
     2941 tgcaacaaaa aaaatacgat gccgcgcttg ccgcactcga cacgccggtt gaggcggact
     3001 tcgcccccct gctgatggaa actaaaggcg atgtttatgc cgcacaggaa aaaagccagg
     3061 aagccttaaa aaactacgga caggctttgg aaaaaatgcc tcaagattct gtcggtcgcg
     3121 aattgcttca aatgaaactc gattcgctga aataaatacc gtctgaaatg ccgctctctc
     3181 ttcagacggc atttcagaca accccatcct acggcaattc ccgtaaaacc atccgccgtg
     3241 tcccaacaga cacctgctcg tgttcagttc taccgaacgg cacttgacac agaaagaccc
     3301 aatcatgaaa ccaaccatcg cgcttatcgg ccgccccaac gtcggcaaat ctaccttgtt
     3361 caaccgtttg acgcgcacca aagacgcgct cgtgcatgac ctgccgggtc tgacccgcga
     3421 ccgccattac ggacacggca aagtcggcag caaaccttat tttgtcatcg ataccggcgg
     3481 tttcgagccg gttgtggaca gcggcatttt gcacgaaatg gcaaaacaaa ccttgcaggc
     3541 tgtcgatgaa gccgatgcgg ttgtgttttt ggtggacggc cgtaccggtt taacaccgca
     3601 agacaagatt attgccgacc gtttgcgcca aagtccgcgt cccgtttatt tggccgtgaa
     3661 taaaggcgag ggcggcgaca gggccgtact tgccgccgag ttttacgagc tggcattggg
     3721 cgagccgcac gttatttccg gcgcgcacgg cgacggcgtg tattacctga ttgaagaaat
     3781 tttagaaaac ttccccgagc ctgaagccga agaagccgat gcaaaacatc ccgtttttgc
     3841 cgttatcggt cgtccgaacg tcggcaaatc tacgctggtt aacgccattc tcggcgaaaa
     3901 acgcgtcatc gccttcgata tggcaggcac aacgcgcgac agcatccaca tcgatttcga
     3961 gcgcgaaggc aaaccgttta ccatcatcga taccgcaggc gtgcgccgtc gcggcaaagt
     4021 ggatgaagcg gtggaaaagt tctccgttat caaagctatg caggcggttg aagcggcaaa
     4081 cgttgctgtt ttggtattgg acgcgcaaca ggacattgcc gaccaagatg cgacgattgc
     4141 cggttttgct ttggaagcgg gacgcgcgct ggtagttgcc gtcaacaaat gggacggcat
     4201 cagcgaagag cggcgcgaac aagtgaaacg cgacatttcc cgcaaactgt atttcctcga
     4261 ttttgccaag ttccacttta tttccgcgtt gaaagagcgc ggtatagacg gtttgtttga
     4321 aagcattcaa gctgcctaca acgcggcgat gattaagatg ccgacgccga aaatcacgcg
     4381 cgtattgcaa accgccgtcg gacgccaaca gccgccgcgt gccggcttgg tgcgtccgaa
     4441 aatgcgttat gcccaccaag gcggcatgaa tccgccggtg attgtggtac acggcaattc
     4501 gctgcacgcg atttccgaca gctatacgcg ctatctgacc cagaccttcc gcaaagcctt
     4561 caacctgcaa ggcacgccgt tgcggattca atacaatgtt tcggaaaacc cgtatgaaaa
     4621 tgcggaagac aaaccgaaga aaaaaccgct gcgccgcgtc agcctgagca accgtattga
     4681 gaaacgcgaa ggccgaaagg aagagaaaaa ccgcttcaag aagaaaacca aagtcagtgt
     4741 gaaaaaacaa ttcagcaaat aattcccgac atttcaaaca ataggaaaca ttatgtggtt
     4801 caagcagatt agtttttatc cgctcaacaa agaaaagctg cctgaggcgg acgtacttgc
     4861 cgacaaactt gctgaagctg aatttaccca ttgccaaggt ttggactggt tcagcgaagg
     4921 ctttaccgca ccggtttctt tttcgcccga actcgttttc cctgccgact ttaccttgcg
     4981 cgtcgccctg aaaaaagagg aaaaagtcct gcctgccggc gtcatccgcg atattttgga
     5041 agagaaggta gcggaaatcc aaaacaatga agcccgcaat gtcggtcgca aagaaaaaca
     5101 agagcttaaa gagcaaatta cagacgacct gctgccccga gcgtttaccc gcagcagccg
     5161 tacagaagcg gtgtttaaca cccgccacgg ctacctgctc gtcaataacg cggcttccgc
     5221 caaagcggaa aacatcctga ccaagctgcg cgaagctttg ggcggtttgg aagcctcgct
     5281 gccgaatacc aaacaatcgc cctcttccct gatgaccggc tggctgttgc aagggcattg
     5341 cgaaggcggt tttgaattag acagcgattg cgaactcaaa ggtacgggcg atattgttcc
     5401 cgtcgtcaaa gtatccaaac aagacttaac cgccgacgaa gtggttcaac acgtcaaaaa
     5461 cggtaaaacc gttacccggc tcggtttggt ttggcgcgaa caaatcgcct ttatcctcac
     5521 tcaagacttc acactcaagc gcatccaata cctcgacgta ttgcaggaag aagccgaaag
     5581 caacggcgac gatgccgccg gccttgcctt cgcctcgcaa atcctgatgg cggaatccgt
     5641 cagcaccatg ttggaagagc tggtttccta tttgggcggc tggcaagatt gatttttcag
     5701 acggctttta taccgtcagc caaaatccaa tggaataacc cttatgctta aacatctcgc
     5761 attcctactg cccgccatga tgttcgccct ccccgcccag accgccgtcc taagccccta
     5821 tcaggaaacc ggctgcacct acgaaggcgg gatcggaaaa gacgggcttc cttcaggcaa
     5881 aggcatatgg cgttgccggg atgggcgcgg ttataccggt tcattcaaaa acggcaaatt
     5941 cgacgggcaa ggcgtttata ccgttgccgc cggccgcgaa gtatttctcg agccgttcaa
     6001 ttccgacagt accaaattcc gcaatatggc attgtcgggc acgttcaaac aaggcttggc
     6061 acacggcagg ttcgccgcct cgcaaaacgg cgaaaccctc ttttattatg aaatgcgaac
     6121 acggcatgat taaagaagtg aaactgccca aaaacaaata accccccgtt tttcaaacag
     6181 catcccccaa tgctttatcc gaacaccgca aaaaacaagg aaaccccatg agcatcaagt
     6241 ccgacaaatg gatacgccga atgagcgaag aattcggcat gattgatccc ttcgagccga
     6301 accaaatcaa agaagccgac ggacagcgca tcatctccta cggtacgtcc agctacggct
     6361 acgatatccg ctgcgccaat gaatttaaaa tttttaccaa catcaacagc accatcgtcg
     6421 atcccaaaaa cttcgacccg aaaaatttcg ttaccgtcga agacgactgc tgcatcatcc
     6481 cgcccaattc cttcgcactg gcgcgcacgg tcgaatattt ccgcattccg cgcaacgtcc
     6541 tgaccgtctg tttgggcaaa tccacctacg cccgctgcgg catcatcgtc aacgttaccc
     6601 cgttcgagcc ggaatgggaa ggctacgtta ccctcgagtt ttccaacacc acccccctgc
     6661 ccgccaaaat ctacgcaggc gaaggcgtgg cgcaagtcct cttcttcgag agcgacgaag
     6721 tgtgtgaaac ttcatacaaa gaccgcaacg gcaaatacat gggacaaacc ggcgtaaccc
     6781 tgcccaaagc ctgaaataca aaatgccgtc tgaaccctta tcgtcgggtt tcagacggca
     6841 tctacctatt tatccgtggt tagaactgaa ccgtcccatt gatgctgatg ctgatttcct
     6901 ccacacccgg tgcggctgaa tccgtaccct tcatattgac gcttgccgcc atcggcatcg
     6961 cgcgcagcat ttttgcccga acagccccat cgcccgcaat atggctgccg atttgcccaa
     7021 aattcaattt gacgatttta taaccggacg cacccagaac gcccgccagt ttttcggcac
     7081 gcgccttgaa acgcaaaacg gcatccttgc tgacctgatc gatgacctcg tttcggcgtt
     7141 cgcgcgacac gctgaaatcg gtatcttcaa gcgaagcatc cgtctgaaca tcagcaataa
     7201 aacggtttaa agcatcaaaa tccctgccct ccgccttaaa ttccgcacgc tcctcccagc
     7261 ctgtttgaat gcgtctgccg ttggtatatt gatagcgcgg catcgcactg cgcgatacca
     7321 attcggtttt aaagctacca tttttcgatt ttctggtaaa attgttgaat tttttaacaa
     7381 actcggcatt gacggcattt ttgtcccgtc cttccgccgc cacctggaaa cgcgcggaca
     7441 ttgtatcctg agccacctcg atacccgccg attcggaaaa ttcgacaata ttgtaattca
     7501 atgcctcagc cgccgccgga aaagataccg ccagcaggga agccgccaaa acagaacgca
     7561 gcatatccgt atccttactt gaaaaaccgc caatctaaca tataggtacg ctaaattgcg
     7621 ttagcataag acaacaattt aaatattcga tcggtctgcc ttataataac cgtctttccg
     7681 atactgaatc atattatgtc cgaaccgttg cacgtcctcg tcatcccctt atggtatcca
     7741 cgatccgaac aggatgtgga cggaatattt ttccaaaatc aagcacaggc cctccaacgc
     7801 aaaggcatca aaaccgccat cctcgccccc atgttccgtt atctgcggaa agaaacagca
     7861 agcatcctga ccggtcctta cggttttgcc cgatgccggc aaagcggttt ggacatctac
     7921 gcatggcgca gcatgtattt cttccccgct ttccgtttat cgacatcgac cgcatccgct
     7981 gggtgcgcgc cggtttgaaa gccttcaaac actacatccg cgaaaacgga ctgcccgacc
     8041 tgattcacgc ccactgcatg aactatgcag gcatacttgc ccaaaaaatt tccgaaaaat
     8101 acggcattcc ctacgtttta accgaacaca gcagcaccat cacgcgcggt ctgatccgtc
     8161 accaccaatg gcagccgatg gaaaaagcag cggcgcccgc ctccgcacgt ctcgccgtca
     8221 gccgccattt cgcacacgtc ctgcaacaca aatacggctg cgaatggcag tacctcccca
     8281 acatactggg tggaatattc aagcaaacat ttgaataaaa agaaaaaaat aacaaaccgc
     8341 atttcgtgtt ctgcaccgtc tcgcaccttc gccgcctcaa aggacacgat gtcctgctca
     8401 ctgcttttgc ccgggcgttg gcacaatgcc cgcaactgcg cctgaacatc ggcggcagcg
     8461 gacaggaaga acagcggctg aaacagcagg cggcagactt gggcatcgcc catgccgtta
     8521 catttttagg cgcactgcaa cccgaagcaa tcttggattt gatgaggaac agcgacgcct
     8581 tcatcctcgc cagccgcacc gaaaccttcg gcgtggtcta tatcgaagcc ctctcgcaag
     8641 ggttgcccgt catcgccata cattgcggcg gcgcggaatc catcgtttca gacggcaacg
     8701 gatacctcgt ttccgttgac gatgccgatg tcctagccct tctcaaaata tatgaacacc
     8761 atgccgattt ttccgccgaa cagctcagaa ccgactgcct cgcaacattc ggcgaagatg
     8821 ccgttatcgg cagactgatt gccgtattcc gtcaggcggc gcggaacacg gcgcgaaaac
     8881 gcccgaaaaa tagattaaaa tgacgcaaaa caaccttcgg attcaaatat gacccatacc
     8941 gtccacctgc acttggaaga aaccgacaac ccgacgctgc aacgcctgtg cggttctttc
     9001 gacagcaacc tcgattcgct cgccaaagca ctcgacatcc atatcagccg ccgtttcgag
     9061 cattttacct tcaacggtgc atttgcacac gccggcaaac gcgcactgct caaactcttg
     9121 gaaacggcgc agacgcgcga cctaaacgac agcatcatcc gccttgccgc cgtcgaaacc
     9181 caaaccgaag atgccgggca tcaggaaaaa aatcacgaac acgcctatta tttccgaacc
     9241 aagcgcggca gcataggcgg cagaacgcca cggcagaacg gctatatccg cgccctgctc
     9301 gaccacgaca tcgtattcgg cctcgggccg gcaggtacgg gcaaaaccta tcttgccgtc
     9361 gccgccgccg tcgatgcgat ggaaaaacac caagtcgaac gcatcatttt agtgcggcct
     9421 gccgtcgaag ccggtgagaa actgggcttc ctgcccggag acctgaccca aaaagtcgat
     9481 ccctacctcc gtccgcttta tgatgccctc tatgacctga tgggctttga ccgtgtaacc
     9541 aagctgattg aaaaaggcct gattgaaatc accccgctcg cctatatgcg cggcaggacg
     9601 ctcaacggcg catacatcat cctcgacgaa gcgcaaaaca ccacgcccga acaaatgaaa
     9661 atgttcctga cccgcatcgg cttcggcgcg aaagccgtca ttaccggcga caccagccaa
     9721 atcgacctgc ccaaaaacat caaatcggga ttgaaagacg cacgtgagaa actgcacggc
     9781 gtggcaggac tgtatttcca taccttcacc ggcgaagacg ttgtccggca tcctctggtg
     9841 caaaaaatcg tcgaagccta cgaatcggca gaacacgact gacactccaa tgccgtctga
     9901 aacccgatgc atggaaaatc gggcagagaa aaacagagac ggaagccaag ctccgtatcc
     9961 gtttctttat ccgtccaacc gatacatcaa tcgaattttc tgcatcggat tgcctcatct
    10021 ccgcaaaaca ttgccgaagt ttcgcggttg cacgcctgac gcactttctg ccgcgccacg
    10081 ccttcattcc gatcgcttgc ctcaaacgtc ttctgaaaag gcgtaacgct gcatacatac
    10141 atggtggaat ttgaaccgaa aaggtcgatt ttgacggtat tgccgccgct ttccaatacg
    10201 gcgacacggt gttccaactg cgccagacgt gcttccaaat cgctgattct gtcggcaaat
    10261 gcaggcatgg cggcacacgc ggtcaaaatg cccaaaatac attttttcat caatttttcc
    10321 ttgttgcttg aaccctgccc acccggacat cctttttccg ggcggcaggg tcagacttta
    10381 tttgcaggga tgaagcccct tacaaatcag aataatacat gaatcggcac tttatgcttc
    10441 atcctatgtg ttgaaacttc attgttcctt gtctgttgac cgttattccc aatccgttcc
    10501 cacaaccttc ggcttgggtt tgcgcctgcg acggcggcgt tttttctcct gtccttcgtt
    10561 tttttcgtgc cgggcggcgg cctcgttttt ggtcatttcc gtccgctgtt ccgccgatgc
    10621 cgtctgaaac gccgtccacc actcggcaag tgcgcggtcc gcattgccgg tttcggcgcg
    10681 caagagcagg aaatcatagg cggcacggaa acgcgcctgt gcaaacagtt tgtgcggacg
    10741 tgcgcctttg cggttttcaa actgcggctg gaacatccaa atttcacgca tcgtggcgga
    10801 aaagcgttgc ggtacgcccc aaccgcgttc gacggtttcg cgcatcgtat tgattgcatc
    10861 ggacagggcg ggcgtaggtt tcaaaccctg ttgcagattg cttttccaat ggcggtccaa
    10921 ctctggccac atcagggccg ccagtacgaa accgaccgaa accgatttgt cggcacgcag
    10981 ccgctcatcg gtatttttca gggcaagcgc cgtcattttt ccggcgatgc cgtctgaaac
    11041 gcgcaaagca ttgagcagcg gatggatgtc cggtatgtca aatccgttca aacgtttcag
    11101 acactcgcgc gcgtgccctg aaaacagcag tttcatgatt tcgtcgaaca gccttgccac
    11161 aggttcgtgc ttcagacggc atatcgattc ggcaatcggt gcggcggttt cttccgacag
    11221 ctcaaagccc aatttgcccg acaggcggat ggcgcgcaaa atcctgacag ggtcttcctg
    11281 atagcgttcg gcggcattac caatcataac cagcctgcgg gcggcaacat cggcaatccc
    11341 gttgtggaaa tccaaaatct cttctttttc aggatcgtaa tacaaggcat tgcaggtaaa
    11401 atcgcgccgc atcgcatctt cttcgatgct gccgtaggtg ttgtccttca tgattctgcc
    11461 gtgcgcgttc tgatgaacct tcgcaccgcc gcgaaacgtc gttacttcga taatctccgc
    11521 accgttcatc acatggacaa tctgaaaacg cctgccgatg atgcggctgc ggcggaagag
    11581 tttgtgcacc tgttcgggcg tggcatcagt tgcgacatcg aaatctttgg gttcgatgcc
    11641 gagcagcagg tctctgaccg caccgccgac cacataagcc tgaaaccccg cccctttcag
    11701 gcggcgtatg acgttttcgg cggcaaagct caacatttcg gcacggatgt tgtgtctttc
    11761 ggcaggaatg accgttttac tttccgcttt tttactgctc cgaccggaag gcagcatctt
    11821 attcaaccat tttttcagca taaatattct gacccgaaga gcggcatctc cacgggcaac
    11881 cgtgttcaga ctgcatcagg cggtacgatt ccacaagatg ccgaaaacca taagcaaaag
    11941 gcgtagaaac tacgccgtcc gaatcacgcc gccctcgcgg cggcaacgcg tcattataac
    12001 agattgcccc ttaaaaaatc agaccctgct tttgtggcgg agtctgaaat ttgatgcacc
    12061 ttatatattg cgtccctaag aagggatgat taacaaaaat taacaccctt tactttcttt
    12121 tccgattggg aacattcccg tcgtacaaac aagcaaatga aggaacagaa atcacattca
    12181 aacggcgttc cgccgcctct acgccgcttc ccagtagtcg atataaagct gcaattcgag
    12241 gttgtcgcgc cattcgttgg caacggggcg gtacaccgtg cggatgtatt cgggaatgtc
    12301 ttcgctgcaa cgccagaaca tcgcttcaaa ttcgcagccg tctttttgca accacgcttt
    12361 tttgtgtttg ccttccgcgc ccaaaggctg ctggcgaacg acgtggaact cgtcggtaaa
    12421 gctcggcggc gcaaagccct gcccccaaac gtggcaggcg aggttttgcg cctgttccaa
    12481 cgtgatgtcg caggcgggca ggctgccgtc agtaatatag gtttgcgaca aatcgtcttc
    12541 gcacaccatc tcacgcacgg cttcttcaaa ggccgtctga aacgcgggaa tattgtgttc
    12601 aagtatgctt aaacccgccg ccatcgcgtg tccgccgaat ttcaaaatca aatcgggatg
    12661 gcgtttggac accaagtcca aagcatcgcg caagtgcaga ttgggaatgg agcgtcccga
    12721 accgcgcact tcgccgttgt ccgccggcgc aaacacgatg gtcggacggt aaaaacggtc
    12781 tttgaggcgg ctggcaacaa tgccgaccac gccttgatgg aagtcgtcgc gatacgccac
    12841 caaagtcgtc tgacctgaag gcagggtttc gggaaaggcg ttcaacgcgt ctcgcagcat
    12901 agactgctcg atttcgcggc gttcgatatt gaggttgttt aaccgagccg ccagttcctg
    12961 cgcttcggaa tcatctcgcg ccaacaggca ggcgatgccg accgacatat cgtccagccg
    13021 tccggcggcg ttgatgcgcg ggcccaacgc aaagcccata tcaaacggct gagccttgcg
    13081 ccaatcgcgc cgcgccactt caaacaaggc gcggatgccg gggcgcattt tgcccgaacg
    13141 catccgtttc aaaccttgcg acacgaggat gcggttgttg tggtcgaggg ggacgacatc
    13201 ggcgacggta ccgagtgcga ccaaatccaa aaggccgccc agattcggct ctttgatgcc
    13261 gtctgaaaaa taattgcggc ggcgcagttc ggcacgcaac gccgtcaaca cataaaaaat
    13321 cacgcccacg cccgccaagc ttttgcttgg aaaaccgcag cctttttggt tcggattgac
    13381 gatgatgcag tcgggtacgg tatcggctgg caaatggtgg tcggtaacga tgacatccaa
    13441 acccagagcc tgcgcgcgcg ccacgcctgc aatactggca atgccgttat ccaccgtaat
    13501 cagcaaatcc acgccttgcg cggcggcgat ttcggcgagt tcgggcgtta agccgtagcc
    13561 gtgctcaaag cggttgggca cgaggaaatc cactttcgcg cccatcgccg ccaaaccgtc
    13621 caaaccgacg gcgcacgcgg tcgcgccgtc ggcatcatag tcggcgacaa tcaggatttt
    13681 ttccttgcgt tcaaccgcat ccgccaaacg gccggcggcg gcttcgcaat tcgtcagcga
    13741 ttgataaggc aggagggaag cgagtttgtc gtccaactcg gcaggacttt gcacaccgcg
    13801 cgaggcacaa agccgggcga ttaaaggatc ggcgccggcg gcgagcaaat gattgaaaac
    13861 gtcggtattg acggggcggg tttggatttt gactgacata gcgcggggtt ttacagtgcg
    13921 ggtgtgcttg aaatgccgtc tgaaggcttt tcagacggca ttgccgttca tttgtctgag
    13981 gaattcgcgg ctgcaatcag agccataggc aagaccagca ccgcggccgc cgcatccaat
    14041 atcaacaagg ggggcgtata ctaagatatt tccaaacagc ttggatttgt cggtatgttt
    14101 ttcagtaacc gtataataaa tatcggcggg cacactttgc tcaaaatgat aatcggcgtt
    14161 cagtttttgc ggtgtggcgt agtatttgcc tttggcggat acgcagcgcg tgtaaatggt
    14221 ccgattgtcg agtttgaccg ctttaaactc aagctgtttc agcttggcga tgtcgtcagg
    14281 tctgtcggta tcatagcgca ggcaaagacc tccggtactg aaattctggc tgccgggcgc
    14341 ttcgaatttg accggcaggg cttggtggcg ggcatagctc ggggtatcct caactatttg
    14401 gaagggcttg tccaacccgg ccttcaaaag gcccgtcagc ttcgccgaat cttcgggatt
    14461 gacggcgaac cagtatttcc cgcccatcat caccaggctg cccttttcca attgggcatt
    14521 gtcttcggca accacaccga aggcgcggat ttggtctttg tcaacgtgtt tgcgggtaat
    14581 tgtttggctg accgggttgt tcatcccccg caacatcatc gtacagccgt tcagtatcaa
    14641 ggttgccgcc aaaacggcgg cggtcgtttt acggaacaac attttatctt ccaatctaaa
    14701 taacggcgga tgccgtctga aaatatgcct aaatttccgc gcccccgttt tccatcacgg
    14761 ttttcaattc ttgaaacagg gcgcggaagt ttttcggcgg tttgtcctgt tcctgttctt
    14821 ttttggtgtt gcggacgagc gtcctcagcc tgcccgcgcc ggcgtttgga aaatcggaca
    14881 taaactgcgt cagcgcgccc tcgtctgcca acaaccgtac acgcgcctgt tccacgcgtt
    14941 gcaaaaaggc gttgtgcgcc gcatcgtcgc cgcgcagctt ggcaaggaac gcctcgatgg
    15001 gcgcgggatc ggtatcgcgc atcagacgtc cgataaattg cgcctgacgt ttgagcgcgc
    15061 cgttggacgt aattttttta taggtaacga cggcctcgta caaatcttca tccaaaccga
    15121 tttttttcag cgtgtcgttt gagagcctgg tcagttccat acccaaatcc tgcaaaccgt
    15181 tcatctgctt tttcatttgg gttttgctga tccactcgtc ttcttgttca aacatcttga
    15241 ttctcgaatt ttttccaata gcgtatttta acagaatgcc gccgcgttca gacggctttt
    15301 tgcaccgcac gccctgcaag cggcacgctt ttgcccctgc cgcccgaaac ggttaaaatg
    15361 ccgcaacgct ccaccaagaa agattgttat gctgttcaac cacaccgctt ccgaactcct
    15421 cgacctctgc cgccgcacgc tcgacttggc aaaagcagcg ggcgcgaccg ccgccgaagc
    15481 cgacttcagc gaatcgctcg gacaaagcgt cagcgtgcgc ttgggcgaaa tcgaacaaat
    15541 cgagttccag caggacaaat cgctggacat taccgtttac gtcggcaaac gcaaaggccg
    15601 cgccggcacc gccgacttct ccgaacaagc cctgcgcgac accgtccgcg ccgccgccga
    15661 catcgcccgc cacaccgccg aagacggttg cgccggactt gccgaccccg agttgatggc
    15721 gcaacacatc ggcgaccccg acctttacca cgaatgggat ttggatacgg aagccgccgt
    15781 cggcttggca aaacaatgcg aacaggcagc gttggacacg gacagccgca tcgaaaactc
    15841 cgaaggcgcg gcggtgcaaa ccggacacta ccaatacgtt tacggcaaca cccacggttt
    15901 tgccgcacac cggcaaagca cgcaccacag catttcctgc agcgtcgttg ccgccgacga
    15961 aaacggaatg cagcgcgact actggtacga ttccgcctgc cgccatccgg atatggacag
    16021 ccccgaaacc atcggtcaaa ccgccgcccg ccgcactttg cgccgactcg gcagccgcag
    16081 catcccgaca ggcagctacc ccgtcctctt cgataccacc gtttcgggcg ggctgatcgg
    16141 acacctcgtc ggcacactct ccggcggcgc gctctaccgc caaagcagtt tcctgatcga
    16201 cagcatcggc aaaaaagtcc tgcccgattt cctcaacctg cgcgaagaac cgcacatccc
    16261 ccgctctttc cgcagcagct attttgatgc ggaaggtgtt gccaccgcgc cgcgcttcgt
    16321 gattcaaaac ggcattgtcg aaggctattt cctcggcagt tacagcgcgc gcaaactcgg
    16381 aatgcagacc acgggcaacg ccggcggcgc gcacaacctg tatttgaacc atacgcacga
    16441 aacgcaatcc gacctgctga aagaaatggg cacgggattg ctggtaaccg aattgatggg
    16501 acagggtgcg aacaccatca ccggcgacta ttcgcgcggc gcggcgggtt tttgggtgga
    16561 aaacggcgtg attgcctacc ccgtccacga gattaccgtt gccggacgct tgcaggatat
    16621 gtaccgcgac atcgtcggcg tggcggatga cgctttgcgg cgttcgtcca acaaaatcgg
    16681 ttcgattctg attgcgggga tgacggttgc cggaagctga acgccctgcc gatgccgtct
    16741 gaagacgaag gcggcgcgtt ttgccccgtg cctgcccgtt tgccgtttta tgccgcaccg
    16801 ccttttaccg gcgacattgc acattttttt catcagcact gattttccct tatccgtcaa
    16861 aatactaagc cacttgccca caacagggta cacacaagtt caggataagg cgggcgggga
    16921 ttggggactt ttccgccatc ggcaaaacgg cagacaaaaa cggcgggaca ttgcctgtcc
    16981 cgccgttttc aaatatacat ttgaccgtac atcaggaatt aagctgcctg aatgttggcg
    17041 gcctgtttgc ctttagggcc ggtggttacg tcgaaagaga cgcgttggcc ttctttcagg
    17101 gttttgaaac cttccatatt gatcgctgag aagtgtgcga acaaatcttc gccgccttcg
    17161 tcaggagtga tgaaaccaaa acctttagcg tcgttaaacc attttacgat accggttgcc
    17221 attagaaact tcctatactt aaaaattaac aaaatcagca aaataaggca tacagcaaac
    17281 ttaaacgttc agcgtttcca cccagcttta tatacttggt cgagtgccga cttttgctta
    17341 accgtctttt tacatttgtt aagacaaaac gtcaagctat gttttcaaaa aagtgggaaa
    17401 ataggcgaaa gtaccgaaaa tacaacaaaa atgccgtctg aacgcggctt tcaaatggga
    17461 cacgctatga ccgcgcaaca ccaatccgac acgcttttgc accgcctgaa caccctgccg
    17521 ccgaaacgtt acggcgtatt tttattgaac gacgattaca ccacgatgga atttgtcgtt
    17581 gaaatcctga ccgaaatctt tatgctcggg caggaacagg cggtagcggt aatgctctcg
    17641 gttcatcacg aaggcaaagg cctgtgcggc acttacacgc gcgatatcgc ccaaaccaaa
    17701 cagcaacaag tcatgcagcg ggcaaaagcc gaaggacatc cgctgcaatg tattgtcgag
    17761 gagatttaat atgcttgccc ctgaattgga acagattttg cagcagcttt accgcgaggc
    17821 gcgtaaggct cattatgaat ttatcagcct cgagcatctg cttttggtac tcatcgaaga
    17881 agatgccgcc gtgccgaacg tcttaaaact ctgcggtgcg gatttaaaag cggtgtccga
    17941 acagctcgcc gccagcgttg ccgaaaacac ccccctgatt cccgaccacc ttttagacac
    18001 ggtcgaaacc cggcccacgc tcggcttcca acgcgtcatc cagcgggcga tggtgcatac
    18061 ccaatcggca ggcaaaggct tggccgagcc tttggacgtt ttggtcgcgc tgatgagcga
    18121 aaccgacagc cacgccgttt attttttggg tttgcaatct gttacgcgtt ttgaagtttt
    18181 gcgctgtatt gcccacggct ctcccgatga agatgaagac gatggcaact atttttcaga
    18241 cggcatggac gacgataatg agaaccgcac caaaccgggc aaaaaccctt tatcggcgta
    18301 caccgtcaac ctcaacgccg aagtcaaagc cggccgcatc gaccctttga ttggtcgcaa
    18361 acacgaaatg gaacggctgg tgcaaatcct gtgccgccgc cgcaaaaaca atccgctttt
    18421 ggtcggcgaa gcaggcgtgg gcaaaaccgc gctggcggac ggtttggcac atcaaatcgt
    18481 caacgacgac attcccgacg cgctcaaaga ggccgaagtg tacgcgctgg atatgggttc
    18541 gcttttggcg ggcacaaaat accgcggcga ctttgaagcg cgggtcaaat ccgtcttgaa
    18601 acagctcgaa aaaatcccgc acgccatttt attcatcgac gaaatccaca ccatcatcgg
    18661 cgcgggcagc accggcggcg gcacgatgga cgcgtccaac ctgctcaaac ccgcattggc
    18721 gaaaggttca ttgcgctgta tcggcgcaac cacttacgac gaataccgta ctatttttga
    18781 caaagaccac gccctaagcc gccgcttcca gaaaatcgac gtggtcgaac ccaccgttgc
    18841 cgaaaccgtt caaatcctgc gcggcttgaa accgatgttc gaagccttcc accaaatccg
    18901 ctacacgcaa ggcgcactcg aagccgccgc cgaactctcc gcccgctaca tcaacgagcg
    18961 cttcctgccc gacaaagcca tcgacgtaat ggacgaagca ggcgcggcgc aacggattct
    19021 gcccaaatcc aaacagaaaa aagtcatcgg caaagcgcaa atcgaaaccg tcatcgccaa
    19081 agtcgcgcgg attcccgaaa agaccgtgtc gcacgacgac aaacaagtgt tgcaattcct
    19141 cggccgcgat ttgaaaaaca tggtttacgg tcaggaaaat gccatcgatg cgttggttgc
    19201 cgccgtcaaa atgtcgcgct ccggccttgc cctgcccgac aaaccgatag gcagcttcct
    19261 cttctccggc cctaccggcg tcggcaaaac cgaagtcgcc aaacagcttg cctactcaat
    19321 gggcgtaccg ctgcaacgct ttgatatgtc cgaatacatg gaacgccacg ccgtatcgcg
    19381 actcatcggc gcgccaccgg gctacgtcgg ctttgaacaa ggcggccttt tgaccgaagc
    19441 cgtcaacaag cagcctcatt gcgtgttgct cttggacgaa atcgaaaaag cccatccaga
    19501 tattttcaac gtcctcctgc aagtcatgga cgcaggcaaa ctgaccgata acaacggtaa
    19561 gagcgccgat ttccgcaacg tcatcctgat catgaccacc aacgcaggcg cagaaagcct
    19621 cagccgaccc agcctaggct ttaccgccaa acgcgagcgc ggcgacgaaa tgcaggcaat
    19681 caacaaactc ttcacgcccg agttccgcaa ccgcttggac gcgatcatcc cgtttgcacc
    19741 tttgtccgaa cccatcatcg tcaaagtcgt ggacaaattc ctgctccagc tcgaacaccg
    19801 gctcctcgac aaaaaagtcg aagccgaatt cacaccggca ttgcgtaaat acttggcaga
    19861 aaaaggtttc gacccgcaaa tgggcgcgcg cccgatgcac cgcctgattc aggaaaaaat
    19921 ccgcaaaccg ctcgccgacg aactcctgtt cggcaaactc gccgacggcg gctttgtgcg
    19981 gatagactgg gatgcggcga aagaagaagc cgtattgaag tttaagaaaa gcaaggtcaa
    20041 aataaaaacc gcctccgcat aaaatcaaaa atgccgtctg aaaggttcag acggcatttt
    20101 gtcaaatatc ggcccctatt ccggcaaact tctccacaaa cgccgcgatt ttttggaaga
    20161 cgctttgttt cttcgtcaga tattgcgggt tgagcggact cattttcggc agggtttcgg
    20221 tcagttccgt accgttttcg ctggcatagc cgcgtttgag cgagccggtc aaatagcgtt
    20281 tggcggcggt ttcgttcagg ccttcggcgg caatcaatcc tgccgcttcg tgccgcatca
    20341 cctcttgcgc gtaggtgtaa aaggtttcca gtatggcggg aacgtcgggc actttatcca
    20401 aatccgtatc gttgatgaaa tccacaatca ggccctcttt ggcgcggtgg ccgatgctgg
    20461 cgcggatgat gcggcggatt tcttccacca gctccgcttt gcctttgatt tttttgtgat
    20521 gctcgaaaac cagttgcagg atgtaatcca gattgatttc ctgcgatttg agcaaatcca
    20581 cctcaaaaac cacatcgtcc cagtcgattt ttgactgttc tttctgttcg cctgcttttt
    20641 ggcggcgcag ccagtctcgg atgtcgttat aggcggaacg gtagtcctgc accgcccttt
    20701 cagacggcat cggcactttc cgcatttcct gcacgtcttc gtcgctcagg tagtattttt
    20761 cctgaaacgc cttcatcgca tcttcgtccg ccgcgtccac attctgcaat tcgcgcagcg
    20821 cggcaaattc atcgtagttc tgcaatacgt tttccgcccg caggtattcg ccgaagagtt
    20881 tggcaaaatc ttttttgtct ttttccgttt cgattttgtc gggatcgggg aaacgctcgt
    20941 gcaattcttt tgctacatcc agataaccgc gccgtgcttc gccggtctgg ctgtcggtat
    21001 agccgttcat gtattcttcg tagctttttt ccagcactat atttttggtg tttttgtcgc
    21061 cgaagagcgt gatcgcatca atggttgcct gctccaagtc gcggaagcag acaatgttgc
    21121 cgaaggtttt ggtagcatcg taaatgcggt tggtgcgaga aaacgcctgc atcaggccgt
    21181 gatagcgcag gtttttatcg acgaacagcg tattcagcgt cggtgcgtca aaacccgtca
    21241 aaaacatgcc gaccacaatc agcaagtcca cttcccggtt tttcacccgt tttgccaaat
    21301 cgcggtagta gttctgaaag gctttgctgt ccgtgccgaa attggttttg aaacaggcgt
    21361 tgtaatcgtt gatggcagcc tgcaaaaatt ctttcgcgct gctgtccatc gcttccggtt
    21421 caaaggtctc gtcaacaatt tcaccgacgg cgttttgctc ttcgttggcg gcaaaggaaa
    21481 aaatggtggc tgttttcaac gggtgcaggc tgcctgcctg ttgtgttttg aacgcttcgt
    21541 aatagcactt cgccgcatcc acgctgctga cggcaaacat ggcgttgaag cctttgccgc
    21601 ccgcattcaa gcggtgcgtt ttctgcctga accggctcag gatatattgc gtgatttcgc
    21661 ggatgcgttc ggggtgcagc agggcttggc ggttttcggc ggcactcagt tccttctcgt
    21721 cctgttccgc ttccacggct ttgaactgcg ggcgcacatc gttgtaatcc actttgaatt
    21781 tcaatacttt ttcatcgcgg atggcatcgg taatcacata agaatgcagc tcccgcccga
    21841 acacgcccgc cgtggtttcc gcgcccaaag cgttttcggg aaaaatcggc gtgccggtaa
    21901 agccgaactg gcagaatttt ttaaatttct ttttcaggtt tttttgcgct tcgccgaatt
    21961 gcgagcggtg gcattcgtcg aaaataaata caacctgccg gtgataaacc ggcagattat
    22021 cttcactttt catcaggttg ttcagctttt ggatggtggt aacgatgatt ttgttgccgt
    22081 ctttttccaa attgcgtttc aagcccgccg tactttccga gccgtttacg ctgtcgggcg
    22141 aaaaacgttg gtattccttc atcgtctgat agtccaaatc cttcctgtcc accacgaaga
    22201 aaaccttgtc gataaacgcc gattccgtcg ccagacgcgc cgccttaaag ccggtcagcg
    22261 ttttgccgct gcccgtggta tgccaaacat agccgccgct ttccggcccg ctccaattct
    22321 tcgcctgcgc cgagctgttg attttccaca aaatgcgttc ggcggcggca atctggtacg
    22381 gccgcataat cagcagcgta tcattcgcat cgaacacgct gtaatgcagc aaaacgctca
    22441 gcaatacgct tttttgcagg aacgtggcgg taaagtcttt caaatcctta atcggatgat
    22501 tgtccgaccg cgcccaattc atcgtgaaat cgaagctgtt tttgtcgcgc ttggtggtgt
    22561 tggcgaaata acgcgtgtcc gtgccgttgg aaatcacgaa gatttgcagg aatttgaaca
    22621 gcgaatttcc gctgttgaag ctctctttgc tgtaacggtg cacctgattg aatgcctcgc
    22681 gcaccgccac accgcgcttt ttcaattcaa tctgcaccag cggcaggccg tttaccaaca
    22741 cggtaacgtc ataacggttt gcatgcgtgc ccgtctgctc aaactggttg ataagctgca
    22801 catggttgcg ggcaaggttt ttcttgtcca gcagataaat gtttttcaga cggccgtcat
    22861 caaaagcgaa atcgtaaata tggtcgtcgt ggattttgcg ggttttatcg gtaatgtttt
    22921 cagccggcct gtccagatat tccgtcaaaa accgcgccca ttcgccgtct gaaaacgcca
    22981 catcgttcag ccgctgcaac tgggcgcgca ggttttccag cagcctgctt tggctgttca
    23041 aatccttgcg gtattcgtac ccctgattct gcaaatcggc gattaactcc gcttctaacc
    23101 ggttttccga ttggtagctg cccgactgtt cgattttttc atattggtcg agcacgatga
    23161 aattcggcgt ttcggcgatg ggtttggttt cgaggttcat gggtcgtcct ttgcggtgtc
    23221 gggttttata gtgaattaac aaaaaccggt actgcgttgg ctcgccttag ctcaaagaga
    23281 acgattccct aaggtgctga agcaccaggc gaatcggttc cgtactattt gtactgtctg
    23341 cggctcgccg ccttgtcctg atttttgtta attcactata aacggtttga tgttcggatt
    23401 gggctgcctg aaaaagtgca ggctgctttt tcaggcagcc ttggggaagg caagcagctg
    23461 ttcgcggtaa tattcgtatt gtttgcggcg cagggcgatt tcgtgcggta ggccttcgct
    23521 gacggagtgg gtcagggtat cgaatttgcc taggatggcg acgatttttt cctgttcggg
    23581 gagcgggggg atggggattt tatattgcat aatcgctgct ttgctgccac gcggcatttt
    23641 tgcacctttg gcgtgcttca tattaaaagc aaaaaattta tcatcggcca atacctgata
    23701 cagatatttt ggattaacct tttcatctgt tacccggata accaaaacat caccgtttgt
    23761 tccgcccgtg cagtctgcct gccagatttt tttcaaatac ggacggatat ttccaatcaa
    23821 aatgtcattg acaatatatt ctgtcatttt tccttcgctt ggaacataac cggataactt
    23881 tttaccttct ctattttgta agagattatc cacgccaacg taattatgtt cgttcagttt
    23941 atccgaacaa atacggtttt ttgaatattc ggcaacctcc cccaacgtct tccaaaccac
    24001 atttttcaga cggcattgat agccgtcagc tatccccccc cgatttgatt gtcaaaatct
    24061 aaaagtaagt cgcggtaata ccggtattgg cgtttgcgca gggctaattc cgcttccagc
    24121 gtagcttcca gcgtagcttc cagctcggtg aatttgtcaa gtatttttac aattttttgt
    24181 tgggtttcca atgatgggat ggggatttta tagttatctg tatctggtgt tgctatttgt
    24241 ggcatttgca tttttgatcc gatattacga aaatagtttt cttgtgtttt taagaaataa
//
LOCUS       DAXFZM010000020        22702 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.020, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000020 DAXFZM010000000
VERSION     DAXFZM010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 22702)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22702)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22702
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.020"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..521)
                     /locus_tag="ACFJAG_000706"
     CDS             complement(<1..521)
                     /locus_tag="ACFJAG_000706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02594 family protein"
                     /protein_id="HFC3980060.1"
                     /translation="MKELKWIEEARKYLGAHEKVNGKSNPVLLAMLQEMGNFNQEQKA
                     WWKETDTPWCGLFVGHCLGKAGRAVIRDWYRAKAWAMSGLTKLEAPAYGCIAVKPRRG
                     GGHVFFVVGKDAEGRILGLGGNQGNMVSIIPFDPADIDGYFWPSKLIGGKPVPSSPAE
                     GRYRLTAAAATGA"
     gene            complement(563..688)
                     /locus_tag="ACFJAG_000707"
     CDS             complement(563..688)
                     /locus_tag="ACFJAG_000707"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980061.1"
                     /translation="MPPETDFAKRRRVTGVEMETERVKPDVSVLRKPAIKGLAGV"
     gene            728..964
                     /locus_tag="ACFJAG_000708"
     CDS             728..964
                     /locus_tag="ACFJAG_000708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HFC3980062.1"
                     /translation="MLRLQKWGNSAAVRLPARLLTALNAKIGDALETEIRNGELLIRP
                     VKRYRLSDLLAETEAAPPRAEGWEEMPDVGQEGV"
     gene            964..1311
                     /locus_tag="ACFJAG_000709"
     CDS             964..1311
                     /locus_tag="ACFJAG_000709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HFC3980063.1"
                     /translation="MYIPERGDIFHLAFDPAAGTEMKGGHYAIALSPRAYNRATGLVY
                     ACPISQGRAAAARSGGMISTLLGAGTATQGNVHCHRMKALDWKIRRAAFRETVPDYVI
                     EDVLARIGAVLFD"
     gene            1319..1552
                     /locus_tag="ACFJAG_000710"
     CDS             1319..1552
                     /locus_tag="ACFJAG_000710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980064.1"
                     /translation="MRSLSAGGSIRFHTRPYFKAFKISAGFQINAVKGAAHKTARKNR
                     RTDRYFSNKSNILRNSLKILVYSAYSYSFLNKD"
     gene            complement(1680..2012)
                     /locus_tag="ACFJAG_000711"
     CDS             complement(1680..2012)
                     /locus_tag="ACFJAG_000711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980065.1"
                     /translation="MGFLQFGLLFAAAGGVLGAVWASLQERGRPVQAVLEAFISAIAA
                     AAAAERFVPLDQAWTCAAAGVFAGMMTGHALDTVRALAPKVLRGYLGGLAEKLTGVKD
                     GGSSDGKD"
     gene            complement(2013..2483)
                     /locus_tag="ACFJAG_000712"
     CDS             complement(2013..2483)
                     /locus_tag="ACFJAG_000712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980066.1"
                     /translation="MLRVLLNRRFLPAGFQAWLFGTATRVLEAVSGLGLSGYAAVFAL
                     APDEIYAWRIYYKFQDIPEAWTVGVLAAAGLLQTALLFARGVRACVASAYLLLFSGFV
                     WFLVSVAFWGAYPPLNTGMVVPPLLAFFCALAGNNALRFLFSAQKSRGLADEGS"
     gene            complement(2554..2859)
                     /locus_tag="ACFJAG_000713"
     CDS             complement(2554..2859)
                     /locus_tag="ACFJAG_000713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980067.1"
                     /translation="MIEDKKIVALNFAVEDGMTGASAAYHVVEHIGADYRNGYVTATL
                     NGYVSENAFKSGKRYLLARTLDFQETDITAPDPGWVYRKALEGAAGIPKDAQPVYAE"
     gene            complement(2971..7116)
                     /locus_tag="ACFJAG_000714"
     CDS             complement(2971..7116)
                     /locus_tag="ACFJAG_000714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017147109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HFC3980068.1"
                     /translation="MGGKSSTVTSAEERILSLQVQRSSQGLTLPVIYGRTRVAGNLIW
                     YGDFVTIEHKTTTRRGGKGGGGVKQVGISYTYEAAVMLALCEGEIQGVGRVWRDKEKF
                     DSPAQLRLTLMRGGDEQPLWTHLQQAKHQGQALNYSGTAYLCSPNYELTKSAQIYQHN
                     FEVIGKSGYSGNIPDANPREIVLDLLTNQRYGCGFPSQNIGDTDRYSNYCRAVGIFLS
                     PAYTEQGEAQRNISELLEQTNSAAVFSQGRLKIIPYGDGSHSGNGAVYVADNKAAYDL
                     TDDDFIVSGAQDPVKAGRKTNADAFNQIQVEYLDRDNDYNVAIAEAKDQANIEQYGLR
                     PKDAVRMHGICDAKVAQKVAQQLLQRALYVRNEYEFKLGWKYCLLEPMDIVTLTDAGL
                     GLNKTPVRITEIEEDGEGVLSVKAEDCPAGVYTVSEYPTQPSSGYSADYNVSPGNAHV
                     PVIFEAPLQLTGGEPQIWLATAGGGMWGGAEVWVSADGDSYTRVGAVNRKARFGALTA
                     DLPDGAVFDRTNTLGVEISAGQLTGGTEQDSRDLLTLCYVDGEFLAYADAELKGVGRY
                     TLGNLTRGAYGSAVNAHAAGSRFARIDEALFKYAVPRNWIGRTVWVKLVSYNVFGGGI
                     QDLAEVPAYSYTIEGAPLGQIQNLRLTSSWAYGKEAVIAWDKLDGADTYDVEIYAGGS
                     RRRLRAVDGIVDNSYTYTQADMKADGGQVRGIVFKVRGRAVTGKTGNWAQIAAQNPQL
                     QALQGISIDSGLRQAFFTCQKPDEEDFAGIIVWVCENAACPAADANKAYDGAETFITI
                     AKCGGKPLEKGKTYYLRAAGYDSFGKDNLKISGSISFTVYDVSATDLSESSLNKALRD
                     KINLIDGNGAGSVNERVEAVRSTADGNAAAVQTHARSINGLEAQYTVKVDANGKVAGF
                     GLATTPKNGTPESKFIVNADRFGIGAAGKADVFPFVVDTQKNRVGINGELVVNGKAVV
                     DKLNAGDIHGGKIAADTLDANRLKAGSVTAREIGAAAVTADKIGANAVTADKIQVADL
                     SAVSSNLGSITGGSLNIGGGNFTVSSDGILTADNAVIRGRIEADSGYFNGTVRASSVE
                     GDVLRAHRLRWTEGNVWVLDLDKDPLPRVLIPNFYVVSETFGNNKVQAKLLLNGGVLA
                     PREVRETENYTNYIWRGRTFGRYEDLPPRARGGGDYTEQSGSRYRTRLEYQIQVIPAG
                     KPVSLKLSLASHESVFSPFVSVSYLAQSDYEYKQLLGRMVWRTFAESFRYDSKKQVYL
                     GGDRRVHDYQNQMYKHWNAYGGLLQLPDDIYGISFEYRPFTNADWSTMLAFDRSDKFV
                     VVKKYRGHAPQQYSLFQEEFNTAVPKSNLLFFVEHWWQYIELRNIRVLIPESRENEVW
                     QVG"
     gene            7356..7634
                     /locus_tag="ACFJAG_000715"
     CDS             7356..7634
                     /locus_tag="ACFJAG_000715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HFC3980069.1"
                     /translation="MESQTFASVFDALCDTPAEAANMRLRAGLMMHIADTVRENGWTQ
                     KQAAEHCGLTRPRINDLLNGKIDKFSLDALVNINAGLGQCISLSFAPA"
     gene            complement(7662..8093)
                     /locus_tag="ACFJAG_000716"
     CDS             complement(7662..8093)
                     /locus_tag="ACFJAG_000716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NlpC/P60 family protein"
                     /protein_id="HFC3980070.1"
                     /translation="MPSETDLRARIVEEARSWLGTPYHHHAMVKGAGVDCAMLLVAVY
                     GAVGLLPEGFDPRPYPQDWHLHRDCERYLGFVTQFCRETESPQAGDIAVWRFGRSFSH
                     GGILAGGGKVIHSYIGRGVVSDDIGQAELIGRGVRFFTFSF"
     gene            complement(8095..8949)
                     /locus_tag="ACFJAG_000717"
     CDS             complement(8095..8949)
                     /locus_tag="ACFJAG_000717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2163 domain-containing protein"
                     /protein_id="HFC3980071.1"
                     /translation="MKAATKELIDLLHGGDEFQMADLYTITLSGGRVLRHTGADMPVV
                     WDGQAYGAHELVIKRGATRTAVGLEVDSNTLQISAAPDYRLEGLQWAEAALGGVLDGA
                     RVKIDRVFFDAGLRPVGAVNIFSGRVSDVSGGRSSVKVDVKSDIELLNVSSPRNIYQA
                     GCMRTLYDDGCKVNREKFTVNGRVTENSRTGTVLKHNLTQPDGWFSQGVIKFAGGRNA
                     GLSRTVKAHGGNTFELALRLPYPPQAGDAFKVYPGCDKRRDTCKDKFDNIVHFRGFPF
                     IPSADTVV"
     gene            complement(8946..9545)
                     /locus_tag="ACFJAG_000718"
     CDS             complement(8946..9545)
                     /locus_tag="ACFJAG_000718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2460 domain-containing protein"
                     /protein_id="HFC3980072.1"
                     /translation="MGNAVFPEFPGLKWGRKKTAVWSTGTQKSASGREFRTAYYTYPQ
                     WRFSLSFEVLRTKASVNELEKLAGFFNARKGSFESFLYEDPADNAVTDQPVGNTVQGV
                     ARYQLVRSMGGFIEPVSAVKERPAVKVGGTALAYGRDYTVTDKGVLVFNTPQPPGRPI
                     TWTGGFYFRVRFTSDTVDFENVLGSLWAAKKIEFTSVKL"
     gene            complement(9545..9811)
                     /locus_tag="ACFJAG_000719"
     CDS             complement(9545..9811)
                     /locus_tag="ACFJAG_000719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980073.1"
                     /translation="MIAHVCASTGWTWDYVADNLDLPRIKHLNEYWREHPPVHILAAS
                     YMGVKPSSGSVQSEADEAEAVGMLGGGELSEDEFDALLKAKGII"
     gene            complement(9823..10152)
                     /locus_tag="ACFJAG_000720"
     CDS             complement(9823..10152)
                     /locus_tag="ACFJAG_000720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980074.1"
                     /translation="MTVRIKGVTVELNGADYVIPPIALGALEQLQERIGSFDGNAADA
                     GQISTVIDCAHAALKRNYPDLTREEAADLIDIGNMNEVFAAVMDVSGLKRREQEAAQA
                     GEARAAD"
     gene            complement(10213..10986)
                     /locus_tag="ACFJAG_000721"
     CDS             complement(10213..10986)
                     /locus_tag="ACFJAG_000721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980075.1"
                     /translation="MQLTFGSGEVFAQMITDAYGNRVQNATPVRIMGLQEMSVDLSAE
                     LKEFYGQNRYPLAVAQGKVKVSGKMKGALINGLTLNTLFFGTEYATGTMKALWAETTG
                     KVLDGDNYSYLQAAAPGGGKFAEDAGVMGQDGTAYIKVASSPKQGQYTVSESGVYAFN
                     SSDKGKTVYPSFTYTQTMPPAKKIELTNMATGNTPTFKMRYLTQFKGKKALLELESVT
                     SGKLGLFSTKNDDFSVPEIDFTASTDEAGFKIGTLWIQE"
     gene            complement(11012..11440)
                     /locus_tag="ACFJAG_000722"
     CDS             complement(11012..11440)
                     /locus_tag="ACFJAG_000722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980076.1"
                     /translation="MNREAVYSALWSKLDALGGFVTKSRKLLHWNDVKRYDQPALFMA
                     QGDMQALTLTGQETKWILRADVYLYVQTAGQPPAPVMNPLIDAVCNAVNAVHPVTGKT
                     DLTADGADIEYCRVEGTVETDEGTLGEQAVCIIPIVICAA"
     gene            complement(11437..11919)
                     /locus_tag="ACFJAG_000723"
     CDS             complement(11437..11919)
                     /locus_tag="ACFJAG_000723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 gp10 family phage protein"
                     /protein_id="HFC3980077.1"
                     /translation="MLKMEFIGGGILAAVFKAYAADVQDAVVKSVGRSALRLQGEVKQ
                     NRLSGRVLGVRTGNLRRSVHQRVNVSGNVVSGEVDTNVRYGIAHEYGFAGSVNVKASL
                     RQVRQAFGRPLKPPRYVHVRAHTRDVKLPERSFLRSALRDLTPKFADDLQKSIGKVLK
                     "
     gene            complement(11919..12449)
                     /locus_tag="ACFJAG_000724"
     CDS             complement(11919..12449)
                     /locus_tag="ACFJAG_000724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0016032 - viral process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="head-tail connector protein"
                     /protein_id="HFC3980078.1"
                     /translation="MAAPVSLEEFKQRIGVEHDRRDDFFLSVIDGVSAAAEAYIGRSL
                     LAADYVGRYDGNGKDRIVLDNYPVLSVSSVKINGADAGGWEFDNWLLMRPEGFARGLK
                     NVEVSYRAGYERMPADIREAVMIIAVQRVNEIEGKGVRSKTLAGETVAFSTFGNSGGM
                     PPSAFAILNEYKRKGV"
     gene            complement(12452..12814)
                     /locus_tag="ACFJAG_000725"
     CDS             complement(12452..12814)
                     /locus_tag="ACFJAG_000725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980079.1"
                     /translation="MPSENQTAFSFGDFEMTVKLKAPEGFTDVSFGSQSYAADENGIV
                     EVPSEAAEFLYQFGFGNVASEPAEGPEKAKRGRKPKTGQPAGQSEPAEAAEPAEAEAE
                     AAEPAEAEAEPAEAEKAE"
     gene            complement(12821..14320)
                     /locus_tag="ACFJAG_000726"
     CDS             complement(12821..14320)
                     /locus_tag="ACFJAG_000726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980080.1"
                     /translation="MNVNQLTQETIELMKSAQAGGGPPDKGFTQPASFTAGLQTYDLS
                     APSQKLYPVLTPLRNRIPRVGGGRTIGSNWKAVTNINVGNQRAGIGEGRRGGVINHET
                     VERNAQFRAIGLENQVTFEADYAARGFEDVKALAVAQTLQATMVAEEMILLGGNTSLK
                     AGVTPTPTAVVSADAAGKISVSTLSVICVALGLQAYWDVAGANNGATGQSPNIKTAQV
                     PAKITRRNADGTTDTFGGGSARKSAAASVSGIEAGKKVTAVIPAVRGAVAYAWYWGAA
                     GSEKLGAVTTAAKVEISADAEGTQTAASLPSEDNSTSILEFDGLLTQIALPDSGAFWS
                     DNKGGGLTSDNAGGVYEFEEAFAHFFTRYRLSPDTVYVNARDLAALTKLIIGNSGAPL
                     IKLNVDVNNTANIRAGVVVGSYMNKITGDDLNIVVHPNLPAGTYLFYSSRLPAYVQGV
                     GNLLQVRTRQEYYQIEWPLRTRMYEYGVYADEVLQGMFMPAFGMITNVG"
     gene            complement(14361..15518)
                     /locus_tag="ACFJAG_000727"
     CDS             complement(14361..15518)
                     /locus_tag="ACFJAG_000727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="caudovirus prohead protease"
                     /protein_id="HFC3980081.1"
                     /translation="MTKLYAQIAKTEAQDDGTVKVWGYASSEAVDSDGEVVAAEAMKA
                     AIPDYMKFGAVREMHGSNAAGTAIEINVEDDGRTFFGAHIVDPVAVTKVKTGVYKGFS
                     IGGSVTARNDLNKSQITGLKLTEISLVDRPANPDAVFTCFKADKPKDEAGAADKDGKP
                     SDKPTEEEDENPKDGDKGPKTEDKGDKDAGKKDEAGKSASVELSESEIAALKAVLAKA
                     DKPKGGTAAKSMYQVKSPADVLMSLKWLVEDAAYDNIDEAVTAQIKESAAGLAESLKA
                     LAASEADKPADGLAAKAGKSGDLAKAESADELAKAQDALKKSNDALAKAQAEIESLKK
                     QAVPPKGSTKAISKAEDNGEDPLKGFQPIVKNDGTLDDVATLIKAKQTGRL"
     gene            complement(15586..17733)
                     /locus_tag="ACFJAG_000728"
     CDS             complement(15586..17733)
                     /locus_tag="ACFJAG_000728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HFC3980082.1"
                     /translation="MSKKTPLSQGFIARVAAGVRYAFTGNADGWFDAGEPPAPAAQQA
                     EGRRFDYEPFYNVGHSKPREREAVGFAQLRALADNYDVLRLVIEARKDQMECLKWTIQ
                     KRDVESTEDDESQRKDRKVDEAVAFFRSPDKEHTWADWLRILLEDLFVIDAPCIYPRK
                     TLGGGLYALEVMDGATIKRVLDNTGRMPLPPDTAYQQILHGMAAVDYTADELIYRSRN
                     NRSYKVYGYSPVEQIIMTVNIALKRQVHALEYYTAGSVPDALVGVPETWSADDIRRFQ
                     EYWDLLLSGETAQRRKMRFVPGELSRNFRETKQPPLKDVYDEWLARVVCFAFSVEPTP
                     FVAQVNRSVAETSREQSLSDGMGSLKNWVKALIDDVLARYMDMAAYEFVWKGEESLNP
                     KEQAEIYAIYKNAGILTADEIRAELGKEPLPGQGQPEPDKQDGRKPEEPPNQGAEKLG
                     KSESPMSEDESAALIEAYLLTRIDGLAEQIAALIEGAAVDWQAGDLAAELSRAAGVVA
                     NGLDFGDWSGLSDVVEPIIRRVAEDGAVAALLRVMPEPAAGMVTNIRSRAVKWAHERA
                     AEMVGMKRAGGGLVRNPAAEWQITEGTREMIRAQVAEAMRNGDSVQELAGRLKESHAF
                     GNARARTIARTETAMADGMGNLIGWEETGLVAGKQWITAKDDKVSDVCNANGGMGVIG
                     LHEPFSHGALTIPGHPNCRCAVVPVLAGDMPES"
     gene            complement(17730..19151)
                     /gene="terL"
                     /locus_tag="ACFJAG_000729"
     CDS             complement(17730..19151)
                     /gene="terL"
                     /locus_tag="ACFJAG_000729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit"
                     /protein_id="HFC3980083.1"
                     /translation="MALGQFDDVETSVIRSLSSASLYMFTRRMFYQRRGYVWQRANHH
                     APICNALERVFNGETKRLIINIPPRYSKTEIAVVNFIAWAMGRVPDCEFIHASYSAAL
                     AVNNSVQIRNLVQHEEYRAIFPDLALAGESGHHWKTTAGGVMYATGAGGTITGFGAGR
                     HREGFGGCIIIDDPHKADEARSEVRRQNVIDWFQNTVESRKNSPDTPIILIMQRLHEK
                     DLAGWLLDGGNGEEWEHLCLPAIQEDGTALWPEKHDIETLRRMEQAAPYVFAGQYLQR
                     PAPPDGGTFKPDNLQFVKALPAGNIRWVRAWDLASTANGGDYTAGGRLGVTEDGRYII
                     ANVVRGRYGADERDRILRNTAQKDGVKTKISIPQDPGQAGKSQTLYLTRQLAGFSVSA
                     GPESGDKVTRAGPFAAQVNIGNVMVLDDGTWDTDALIAEMRMFPNGRHDDQIDCLGRA
                     FGELLDTRTGMIDFLRSQVEAVK"
     gene            complement(19213..19662)
                     /locus_tag="ACFJAG_000730"
     CDS             complement(19213..19662)
                     /locus_tag="ACFJAG_000730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980084.1"
                     /translation="MSGTKRKLGRPTDYTKDMADKICEKIANGRSLRSICAEDGVPPM
                     KTIYRWLEANEEFRHQYARAREKQADYFAEEIIEIADSAQAESAAVSKAKLQIDARKW
                     AASKIAPKKYGDKSELDVKSGDGSMRAAVRLDAEEYRKIAEDVLRRV"
     gene            complement(19955..20824)
                     /locus_tag="ACFJAG_000731"
     CDS             complement(19955..20824)
                     /locus_tag="ACFJAG_000731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bro-N domain-containing protein"
                     /protein_id="HFC3980085.1"
                     /translation="MNVIQSFNFNTTSPVRAFEKDGLTWFVAADVCKALEIQNPTQAL
                     EKLDDDERSMFNIGRSEIHGGGGNVNIINESGLYILILRSRKAMEQGSTAWKFRKWVT
                     SEVLPTIRKTGGYQVGQKTTADDRTGLRQAVAALVGRKGIDYSSAYSMIHQRFNVEAI
                     EDIPAGKLPEAVAYVHALTLHTGLTGEVLDREPLPAPQPALPISGNALYDLAVAVSYG
                     ARAIQMGRDVSLPLKQLGCRQAVTMWTVWAETRSRLKAAANALEALSAHADAEHAEKI
                     RPILPEIRNLSAV"
     gene            complement(21103..22062)
                     /locus_tag="ACFJAG_000732"
     CDS             complement(21103..22062)
                     /locus_tag="ACFJAG_000732"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980086.1"
                     /translation="MAYINILAGDFHKGKAVLKKDCIVLSRGGKVALLDIAGYEVQDG
                     GVIEVVFFDGRRMLVEKNDAFLQAVKVALYNEPQNPEERRQQYNQRQVNSAAKAKKAK
                     KIKLIVGGIFVLLFVAMCAVPKKELTPEEKAAAEKQKIDGKIASGVREFKYDKKAYPK
                     LYKQWGEKAVNEMNGYLPRIAEHIAREDSCDAVETVDISDSRSNPKAKQMVFFVDCRN
                     GKRFFVSTDDLNSGRKSTAEQDKKIDSSAVISQCDEAIKAQLNHPRTFDPHILDTATG
                     VNQNGNVLVTRGFTAKNGLGMQIDYRAYCVITDNKVEVSIEQK"
     gene            complement(22123..22530)
                     /locus_tag="ACFJAG_000733"
     CDS             complement(22123..22530)
                     /locus_tag="ACFJAG_000733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980087.1"
                     /translation="MNQQEFEFMNDLARAFERRYRDTRSLNRCLSIEGRYMGEEACPH
                     KPEIGLRYGEDAMFLTLQAWAKVDAPQQEAVRISFGIGAKSQAAYEERLQAEIRRRGE
                     GPLHLQTDLGLAAWYGAIRQAAGDDFDLLFEKV"
BASE COUNT         4771 a         7076 c         5719 g         5136 t
ORIGIN      
        1 tgcgcgccgg tggcggcggc ggcagtcaac cggtaacgcc cttcggcggg ggacgaaggc
       61 acaggtttgc cgccaatcag cttggacggc cagaaatagc cgtcaatgtc cgcagggtca
      121 aacgggatga tggataccat attgccctga ttgccgccca agcccaagat tctgccttcc
      181 gcgtctttgc cgacaacgaa gaacacgtgt ccgccgcccc ggcgcggttt gaccgcgatg
      241 cagccgtatg cgggggcttc gagtttcgtc aaacccgaca ttgcccaagc cttggcgcga
      301 taccagtccc tgatgaccgc gcgtcccgct ttgcccaggc agtgtccgac aaacaggccg
      361 caccacgggg tatctgtttc tttccaccac gctttctgct cctgattaaa atttcccatt
      421 tcttgcagca tcgctaaaag cacagggttt gacttgccat tcactttttc gtgagcgcca
      481 aggtatttac gggcttcttc aatccatttc aattctttca tttcttttcc ttccgataaa
      541 agacgagatg taaactttcg gtttacaccc cggccaagcc tttgattgca ggtttccgca
      601 acaccgatac atccggtttc acacgttccg tttccatctc cactcctgtt acacgccgcc
      661 gcttggcaaa atccgtttca ggcggcataa tgtatcgaca acgtatctac aacacgaaag
      721 caaaaccatg ttgcgactgc aaaaatgggg caacagcgcg gcagtccgtc tgcccgcccg
      781 cctcctgacc gccctcaacg ccaaaatcgg cgacgcgctg gaaacagaaa tccgcaacgg
      841 cgagctgctc atccgccccg tcaaacgcta ccgcctgtcc gaccttttgg cggaaacgga
      901 agccgccccg ccgcgcgcgg aaggctggga agaaatgccc gatgtcggac aggagggcgt
      961 ttgatgtata ttcccgagcg aggcgacatt ttccatcttg ccttcgaccc cgccgccggt
     1021 acggaaatga aaggcggcca ttacgccata gccctgtcgc ccagagctta caaccgcgca
     1081 accggcttgg tttacgcctg cccgatttca caaggcaggg cggcggcggc aagaagcggc
     1141 ggtatgattt ccacactgct cggcgcggga acggcaacac aaggcaatgt ccactgccac
     1201 cggatgaagg cattggattg gaaaatccgc cgcgccgcct tccgcgaaac cgtccccgat
     1261 tacgtgattg aagacgtatt ggcacgcatc ggcgcagtac tgttcgactg acttcagagt
     1321 gcgaagcctg tccgcagggg gaagcatccg tttccatacc cgcccctatt tcaaagcatt
     1381 caaaatatcc gccggcttcc aaatcaacgc cgtcaaaggc gcggcgcaca aaaccgcccg
     1441 caaaaacagg cgcaccgacc gatatttctc caacaagagc aacatacttc gcaactccct
     1501 caaaattttg gtatactccg cctatagcta ttccttcctt aacaaggatt aggttaagaa
     1561 acgccgcaag gattccgccc ctcgcggcgt ttcgccgttc acaccccgcg cgtaatgtcg
     1621 tgcgtcagcc ggacgcgccc ggaacacagc gtcttcacgc gccgcgatac cgctcgaaat
     1681 caatcttttc catccgaaga ccctccgtct ttcacacccg taagcttttc cgccaagccg
     1741 cccaagtaac cgcgcaacac cttgggcgcg agcgcgcgca ccgtatcgag cgcgtgcccc
     1801 gtcatcatcc ccgcgaacac ccccgccgcc gcgcacgtcc acgcctgatc cagcggcacg
     1861 aaccgctccg ccgcggccgc cgccgcgatt gcagaaataa aagcctccag cacagcctgc
     1921 accgggcggc cgcgttcctg aaggcttgcc cacaccgcgc ccagcacgcc gccggccgcc
     1981 gcaaacagca aaccgaactg caagaacccc attcacgacc cctcatccgc caaaccccgc
     2041 gacttttgcg ccgaaaacaa aaacctcaac gcattattcc ccgccagcgc gcagaaaaac
     2101 gccaacagcg gcggaacgac catacccgtg ttcaaaggcg ggtacgcccc ccaaaacgcc
     2161 accgaaacca aaaaccacac aaagcccgaa aacaaaagca ggtaagccga agccacacaa
     2221 gccctcacgc cccgcgcaaa cagcaatgcc gtctgaagca gccccgccgc cgccagcacc
     2281 cccaccgtcc acgcctccgg aatatcctgg aatttgtaat aaatccgcca cgcgtaaatc
     2341 tcgtcgggcg caagcgcgaa caccgccgcg taacccgaca agcccaaacc gctgaccgcc
     2401 tccagcaccc gcgtcgccgt gccgaacaac cacgcctgaa acccggcggg caaaaaccgc
     2461 cgattcaaca aaaccctcaa catacccgtc acacaccccc cggcaaaaca ccgcgaagcc
     2521 gaagccccgc agtgtccgac gccgtctgaa aacttattcc gcgtaaaccg gttgcgcgtc
     2581 tttggggatg cccgccgcac cttccaacgc cttgcggtac acccaaccgg ggtcgggcgc
     2641 ggttatgtcc gtttcctgaa aatccaatgt gcgcgccaac aggtagcgtt tgcccgattt
     2701 aaacgcattt tccgacacat agccgttcaa cgtcgccgta acataaccgt tgcggtaatc
     2761 cgcgccgata tgttcgacga cgtggtaggc cgcactcgcg ccggtcatac cgtcctcgac
     2821 tgcaaaattc aaggcaacaa tctttttatc ttcaatcatt tcaaatctcc aaaagcccgc
     2881 taggggcggg aacgaaaatg ccgtccgagg tcttcagagg gcattgcccg gacaaaacag
     2941 gaaaaaccca aacggcggca tacgggggcg tcagccaacc tgccaaacct cgttttcgcg
     3001 cgattccgga atcagcaccc tgatattgcg cagctcgata tactgccacc agtgttccac
     3061 aaaaaacagc aggttggatt tcggaacggc agtattaaac tcctcctgaa acagagaata
     3121 ctgttggggc gcatgacccc ggtatttctt aaccactaca aacttatccg acctgtcgaa
     3181 cgcaagcatc gtactccagt cggcattggt aaaaggccgg tactcgaacg atatgccgta
     3241 gatatcgtcc ggcaactgaa gcagcccgcc gtaagcattc caatgtttat acatctgatt
     3301 ttggtaatcg tgtacacgcc ggtcgccgcc caaataaacc tgcttcttac tgtcgtaccg
     3361 gaaactttcc gcaaaggtgc gccaaaccat cctcccgagc agctgcttgt attcgtagtc
     3421 ggattgcgcc aaatacgaaa ccgacacgaa cggcgaaaac accgattcgt gggaagcgag
     3481 cgacaacttc aggctgacgg gtttgcccgc ggggatgact tgaatctggt actcgaggcg
     3541 ggttctgtac cttgagccgg attgttcggt ataatccccg cccccccttg cccggggggg
     3601 caggtcttcg tacctcccga aagttcggcc gcgccaaata taattggtat agttctcggt
     3661 ttccctgact tccctcggcg caagcacacc cccgttcaac agcagctttg cctgcacctt
     3721 gttgttgccg aacgtttccg aaaccacata aaaattcgga atcaaaaccc tcggcagcgg
     3781 gtctttatcc aaatccaaca cccaaacgtt accctccgtc caacgcagcc tgtgcgccct
     3841 caacacgtcg ccctcgacgg acgaagccct gaccgtgccg ttgaaataac ccgaatcggc
     3901 ctcaatccgg ccgcgtatta ccgcattgtc ggccgtcagg atgccgtctg aagacaccgt
     3961 aaaattaccc ccgccgatat tcaggctgcc gcccgtgatg cttccgagat tggaagatac
     4021 cgcgctcaaa tcggcaacct gaatcttatc ggcagtcacc gcgtttgccc cgattttatc
     4081 ggcggtaacg gcggcagccc cgatttcccg cgccgtaacg cttccggctt tcaggcggtt
     4141 tgcgtccagc gtgtccgccg cgattttgcc gccgtggata tccccggcgt tcaacttatc
     4201 gacaaccgcc ttgccgttga ccaccaattc gccgttgatg cccacgcggt ttttctgcgt
     4261 gtccaccacg aacgggaaca catccgcctt cccggccgca ccgatgccga agcggtcggc
     4321 attcacgata aacttgcttt cgggcgtgcc gtttttcggc gtagtcgcca agccgaagcc
     4381 cgccactttg ccgtttgcat caaccttgac cgtgtattgc gcctccaagc cgttgatgct
     4441 tcgggcgtgt gtctgaaccg ccgccgcatt gccgtccgcc gtcgatcgga ctgcctcgac
     4501 gcgctcgttg acgctgcccg cgccgttgcc gtcaatcagg ttgattttgt cgcgcaaagc
     4561 cttgttcaga ctgctttccg acaggtcggt tgccgatacg tcgtaaacgg taaacgatat
     4621 gctgccgctg attttcaggt tatctttgcc gaaactgtcg taacccgccg ccctcaagta
     4681 ataggtcttt cctttctcca gcggtttgcc gccgcatttg gcgatggtta taaacgtttc
     4741 cgcgccgtca taggctttgt ttgcgtccgc ggccgggcag gctgcgtttt cgcaaaccca
     4801 aacgataatc cctgcaaagt cttcttcgtc aggtttttgg caggtaaaaa acgcctggcg
     4861 caggccgctg tcgatagaga tgccctgcaa tgcctgcaat tgcggatttt gcgccgcgat
     4921 ttgcgcccaa ttgcccgttt taccggtaac ggcacgcccg cgaaccttga agacaatacc
     4981 gcgtacctgg ccgccgtccg ccttcatatc cgcctgagtg taggtgtagc tgttgtcaac
     5041 gatgccgtca accgcacgca gacggcgtcg gctgccgcct gcgtagattt ccacgtcgta
     5101 ggtatccgcg ccgtccaatt tatcccaagc gatgacggct tctttgccgt atgcccacga
     5161 tgatgtcagg cgcaggtttt ggatttgacc gagcggcgcg ccttcgatgg tgtaggaata
     5221 cgccggcact tccgccaaat cctgaatgcc gccgccgaaa acgttgtacg aaaccagttt
     5281 gacccaaacc gtgcggccaa tccagttgcg cggcacggcg tatttgaaca atgcttcgtc
     5341 gatgcgcgca aaccggctgc ccgccgcgtg tgcgttgacg gcggagccgt acgcgccgcg
     5401 cgtcaggttg cccaatgtgt agcgtcccac gcccttcagt tcggcgtcgg cgtatgccag
     5461 aaattcgccg tcgacgtagc acaatgtcag caaatcgcgg ctgtcctgct ccgtgccgcc
     5521 cgtcagctgc cccgccgaaa tttccacgcc caacgtattt gtgcggtcga aaaccgcgcc
     5581 gtcgggcaaa tcggcggtca gcgcgccgaa acgcgccttg cggttgaccg cgccgacgcg
     5641 ggtgtagctg tcgccgtccg ccgataccca cacttcggcg ccgccccaca taccgccccc
     5701 ggcggttgcc agccagattt gcggttcgcc gcccgtcagt tgcaacggcg cttcgaaaat
     5761 taccggcaca tgggcgttgc ccggcgaaac gttgtagtcg gccgaataac ccgaagacgg
     5821 ctgcgtcgga tattccgaca cggtataaac accggccggg cagtcttcgg ccttgacgga
     5881 taaaacccct tctccgtctt cttcgatttc cgtgattcgg acgggcgttt tattcaggcc
     5941 gagccccgcg tcggtcaggg ttacgatgtc catcggctca agcaggcagt atttccaacc
     6001 cagcttaaac tcatattcgt tgcgcacgta cagggcgcgt tgcagcagtt gttgcgccac
     6061 tttttgcgcc accttcgcat cgcaaatgcc gtgcatcctg accgcgtctt tcgggcgcaa
     6121 tccgtactgc tcgatattcg cctggtcttt cgcttcggcg atggcgacgt tgtagtcgtt
     6181 gtccctgtca aggtactcga cctgaatctg attaaacgca tcggcattgg ttttgcgccc
     6241 ggcctttaca gggtcttgcg cgcccgaaac gatgaaatcg tcatcggtca ggtcgtaggc
     6301 ggccttattg tcggcaacgt acaccgcgcc gttccccgaa tggctgccgt ccccgtaggg
     6361 gatgattttc aggcggcctt gcgaaaatac cgccgcgctg ttggtctgct ccagcagttc
     6421 ggaaatattc cgttgcgcct ccccctgttc cgtgtaggca gggcttagga aaatcccgac
     6481 ggcgcggcaa taattgctgt accggtcggt atcgccgatg ttttgggacg ggaaaccgca
     6541 gccgtagcgt tggttcgtca gcaaatccaa tacgatttcg cgcgggtttg catcggggat
     6601 gttgccggaa tagcccgatt tcccgatgac ctcgaaattg tgctgatata tctgcgccga
     6661 tttcgtcagt tcgtagttcg ggctgcacaa ataagccgtg cccgaataat tcaaggcttg
     6721 gccttggtgc ttcgcctgtt gcaggtgcgt ccacaacggc tgctcgtcgc cgccgcgcat
     6781 aagcgtcagg cgcaactgtg ccggcgaatc gaatttctcc ttgtcgcgcc aaacccgccc
     6841 cacgccctga atctcgccct cgcacaaagc aagcatgacg gcggcttcgt aggtatagga
     6901 aataccgacc tgtttcacac cgccgccgcc cttgccgccc cggcgcgtcg tagttttatg
     6961 ctcgatggtg acgaaatcgc cgtaccaaat caaattgccc gccacgcgcg tcctgccgta
     7021 gatgacgggc agggtcagcc cctgtgatga ccgctgaacc tgtaacgata aaatccgctc
     7081 ttcggcagat gtaacggttg acgatttacc acccataaaa ccacctcgaa acttgcaaaa
     7141 attatcaaaa tcgatataat ttacttatat caaaacagat ataaaatatg aaaccgttaa
     7201 atttttcagg cggttcattg gattgcctgc ggcaattccc cgaaaacgcc aaacaggcgg
     7261 caggttatca acttcaagaa aagccggaaa accgcgggcg ccgattcgga atcggcggaa
     7321 aaacgttaca acaaattaat tcgggaaaag aaataatgga aagccaaact ttcgcctccg
     7381 tatttgacgc actgtgcgac acgcctgccg aagccgccaa tatgcggttg cgcgccggcc
     7441 tgatgatgca catcgccgat accgtccgcg aaaacggttg gacgcaaaaa caggccgcag
     7501 aacattgcgg cctgacccgg ccgcgcatca acgacctgct gaacgggaaa atcgacaaat
     7561 tttcattgga tgcgctcgta aacatcaatg ccggactcgg gcagtgcatt tccttatcct
     7621 tcgcccccgc gtaaagcccg tcctttcaga cggccgcaaa atcaaaatga aaatgtaaaa
     7681 aaccgaaccc cgcgcccgat aagttcggct tggccgatgt cgtccgacac cacgccgcgc
     7741 ccgatgtagc tgtgaataac cttgccgccg cccgccaata tgccgccgtg cgaaaacgac
     7801 cgcccgaaac gccatactgc aatgtcgccc gcctgcggcg attccgtttc acggcaaaat
     7861 tgcgtgacga accccaaata acgctcgcaa tcgcggtgca gatgccaatc ttgagggtaa
     7921 gggcgcgggt cgaacccttc gggaagcagt ccgaccgccc cgtagacggc gaccaggagc
     7981 atcgcgcaat caacacccgc gcccttgacc attgcatgat gatggtacgg cgtgccaagc
     8041 cacgaccgcg cctcttcgac gatccgcgcc ctcaaatccg tttcggacgg catatcacac
     8101 caccgtatct gccgaaggga tgaacgggaa gccgcggaaa tgcacgatat tgtcaaactt
     8161 atccttgcag gtatcgcgcc gcttgtcgca gcccggataa accttgaacg catcgcccgc
     8221 ctgcggcggg tagggcaggc gaagggcaag ttcgaacgtg ttgccgccgt gtgccttgac
     8281 cgtcctgctc aaacccgcgt tgcgcccgcc cgcaaactta atcacgccct gcgaaaacca
     8341 gccgtcaggc tgcgtcagat tgtgcttcag cacggttccc gtccggctgt tttcggttac
     8401 gcgcccgttt accgtgaatt tctcacggtt gaccttgcag ccgtcgtcat agagcgtcct
     8461 catgcagccc gcctgataaa tgttgcgcgg gctggaaacg ttcaaaagct cgatgtcgga
     8521 tttcacgtca accttcacgg acgacctgcc gcccgatacg tccgacacgc gccctgaaaa
     8581 aatattcacc gcaccgacgg ggcgcagtcc ggcatcaaaa aacacacggt ctattttgac
     8641 ccgcgcgccg tccaatacgc cgcccagggc ggcctccgcc cattgcaggc cctcaagcct
     8701 gtaatcgggc gcggctgaaa tctgcagggt gttggaatcc acttccaatc cgacggcggt
     8761 acgggttgcg ccgcgcttga taaccagctc gtgcgccccg taggcctgac cgtcccaaac
     8821 gacgggcata tccgcgccgg tatgccgcag cacccggccg cccgaaagcg taatggtgta
     8881 caaatccgcc atctgaaact cgtcgccgcc gtgcagcaaa tcaatcagtt cttttgtcgc
     8941 cgccttcata gtttcacact cgtaaactca atctttttgg ccgcccacaa gctgcccaaa
     9001 acgttttcaa aatccaccgt gtcagacgta aacctcacgc ggaaataaaa gccgcccgtc
     9061 catgtgatcg ggcggcccgg cggttgcggc gtgttgaaaa ccaaaacgcc cttgtcggta
     9121 acggtgtaat cgcgcccgta cgccaacgcc gtgccgccga ccttgacggc gggccgttcc
     9181 ttgaccgccg acacaggctc gataaatccg cccatcgaac ggacaagctg ataacgcgca
     9241 acgccctgca ccgtgtttcc gacaggctgg tcggttacgg cgttgtcggc cgggtcttcg
     9301 taaaggaaac tttcaaagct gcctttgcgc gcgttgaaga atcccgccag tttttccaac
     9361 tcgtttacgg acgcctttgt ccgcaatacc tcgaacgaca gcgaaaaccg ccattgcggg
     9421 taggtgtagt aggcggttcg gaactcacgg ccgcttgccg atttctgcgt accggtactc
     9481 cataccgccg ttttcttccg cccccacttc aagccgggga actcggggaa aaccgcattg
     9541 cccatcagat gattcctttc gctttgagca gggcgtcaaa ttcgtcttcg gacagttcgc
     9601 cgccgccaag cataccgacg gcttcggctt cgtccgcttc gctttgcaca ctgcccgacg
     9661 acggcttgac gcccatatac gacgctgcca agatatgcac gggcggatgt tcgcgccaat
     9721 actcgttcag gtgtttgata cgcggcaaat ccaagttgtc ggcgacgtag tcccacgtcc
     9781 agccggtaga ggcgcaaacg tgggcaatca ccgcgccgaa acttaatccg ccgccctggc
     9841 ctcccccgct tgtgcggctt cctgctccct gcgtttcaag cccgaaacgt ccatcacggc
     9901 ggcaaacact tcgttcatgt tgccgatatc gatcaaatcg gccgcttctt cgcgcgttaa
     9961 atccgggtaa ttgcgcttca gggcggcgtg ggcgcaatcg ataacggtag agatttgtcc
    10021 ggcatccgcc gcattgccgt caaatgagcc gatgcgctcc tgcaactgct ccaacgcgcc
    10081 cagcgcaata ggcggaatca cataatccgc gccgttcagt tctacggtta cgcctttaat
    10141 ccgtacggtc atttttattt ccttgacttt ggttgaataa aaaaagccgc cttttcagac
    10201 ggcatataaa cattactcct gaatccacag cgtaccgatt ttaaagcccg cctcgtcggt
    10261 tgaggcggta aagtcgattt cggggacgga gaagtcgtcg tttttagtcg agaacaagcc
    10321 caatttgccg ctggttacgc tttccagttc caacagggct tttttgcctt tgaactgcgt
    10381 caggtacctc atcttaaacg tcggcgtgtt gcccgtcgcc atattggtca gctcgatttt
    10441 cttcgccggg ggcatcgttt gcgtataggt aaagctcgga taaacggttt tgcctttatc
    10501 cgagctgtta aaggcgtaca cgcccgattc cgaaaccgta tattggcctt gtttcgggga
    10561 ggatgctact ttgatataag ccgtgccgtc ctggcccatc acgcccgcgt cctcagcgaa
    10621 cttgccgccg ccgggcgcgg ctgcctgaag gtaagaataa ttgtcgccat cgaggacttt
    10681 gcccgtagtt tccgcccaaa gcgccttcat cgtgccggtt gcatattccg taccgaaaaa
    10741 cagggtattg agggtcaggc cgttaatcaa cgcgcctttc attttgcccg acaccttgac
    10801 cttgccttgc gccacagcca aaggataacg gttttgaccg tagaactctt tcaattccgc
    10861 cgacaaatcg acggacattt cctgcaagcc cataatccgc acgggcgttg cgttctgtac
    10921 acggttgccg taagcatccg taatcatttg ggcgaacact tcgccgctgc caaacgtcaa
    10981 ctgcatgaca tccctttcaa aaaaagccgc attacgcggc gcaaatcaca atcggaataa
    11041 tacaaaccgc ctgttcgcca agcgtcccct cgtcggtttc caccgtaccc tcgacgcggc
    11101 aatactcgat atccgcgccg tccgccgtta aatccgtctt gcccgtaacg gggtggacgg
    11161 cgttcacggc attgcacacc gcgtcaatca gcggattcat gacgggcgcg ggcggttggc
    11221 ccgccgtctg gacgtacagg taaacatcgg cgcgcaaaat ccacttggtt tcctgccccg
    11281 tcaatgtcaa cgcctgcata tcgccctgtg ccataaataa cgcgggctgg tcgtagcgtt
    11341 tcacatcgtt ccagtgcagt aatttacggc tcttggtaac aaaaccgcct aatgcgtcca
    11401 gtttcgacca aagcgcggaa taaaccgcct cacgattcat ttcagcacct ttccaatcga
    11461 tttctgcagg tcatccgcga acttcggcgt caaatcgcgc aatgccgaac ggaggaacga
    11521 ccgctccggc aacttcacat cacgggtatg ggcgcggacg tgaacatatc gcggcggttt
    11581 cagcggcctt ccgaacgcct gcctgacctg gcgcagcgaa gccttaacgt tgacactgcc
    11641 cgcgaaacca tactcatgcg cgatgccgta acggacgttc gtatcgactt cgcccgaaac
    11701 gacattgccg gaaacgttca cgcgctggtg tacggagcgt cgcaggttcc ccgtccttac
    11761 ccccaacacc cggcccgata accggttctg cttgacttcg ccctgcaggc gcaatgccga
    11821 cctgcccacc gatttgacga ccgcatcttg aacatcggcg gcatatgctt taaaaaccgc
    11881 cgccagaata ccgccgccga taaattccat cttcagcatc acacgccctt tcgtttgtac
    11941 tcattgagta tcgcaaacgc cgacggcggc ataccgccgg aattaccgaa cgtagaaaaa
    12001 gcgacggttt cgcctgcaag cgtcttgctc cgtacgccct tgccctcgat ttcgttcacg
    12061 cgctgcaccg cgataatcat caccgcttcg cgtatgtcgg cgggcatgcg ctcataaccg
    12121 gcgcggtacg atacctcgac atttttcagc ccccgcgcga aaccttcggg gcgcatcagc
    12181 agccagttgt caaactccca gccgccggca tccgcgccgt tgattttgac ggacgacacc
    12241 gacaggacgg gataattgtc caacacgatg cggtctttgc cgttgccgtc gtaccgcccg
    12301 acataatcgg cggccaggag gctgcgcccg atataggctt ccgccgccgc cgacacgccg
    12361 tcaatgacgc tgaggaagaa atcgtcccgc cggtcatgtt caacgccgat acgctgcttg
    12421 aactcctcaa gcgataccgg ggcagccatc gttattcagc cttttcggct tcggcaggtt
    12481 cggcttctgc ttcggcaggt tcggcagctt cggcttcggc ttcggcaggt tcggcagctt
    12541 cggcaggttc ggattgtcct gccggctgcc cggttttagg tttacgcccg cgcttggctt
    12601 tttcaggccc ttcggcaggc tcggaggcaa cgttgccaaa accgaactga tacaggaatt
    12661 ccgccgcctc cgacggcact tccacgatac cgttttcatc tgccgcgtag ctttggctgc
    12721 cgaaggaaac gtcggtaaac ccttcgggcg cttttaattt gactgtcatc tcaaaatctc
    12781 caaaagaaaa agccgtctga ttttcagacg gcatatcggc ttaacccacg ttggtaatca
    12841 taccgaaggc aggcatgaac ataccttgca gcacctcgtc cgcatagacg ccgtattcgt
    12901 acatacgggt gcgcagcggc cattcgattt ggtaatactc ttggcgcgta cgcacttgca
    12961 gcagattgcc gacgccctga acgtaggcgg gcaggcggct tgagtagaac aggtaagtac
    13021 cggcaggcag gttcgggtgt accacgatgt tcaggtcgtc gcccgtgatc ttgttcatat
    13081 acgaaccgac aacgacaccg gcgcggatgt tcgccgtatt gttcacgtca acgttcaact
    13141 taatcaacgg cgcgccgctg tttccgataa tcagcttggt cagcgccgcc aaatcgcggg
    13201 cgttgacgta gacggtatcg ggggacaggc ggtatcgggt aaagaaatgc gcgaacgcct
    13261 cttcaaattc atacacgccg cccgcgttgt cggaagtcag gccgccgcct ttgttgtccg
    13321 accagaacgc gcccgaatca ggcagggcga tttgggtcaa caggccgtca aattccaaaa
    13381 tagaagtgga attgtcttcg gacggcaggg aagcggcggt ctgggtacct tcggcatcag
    13441 ccgaaatttc cactttggcg gcagtggtaa ccgcgcccag tttttcagaa ccggccgcac
    13501 cccagtacca agcataggca accgcgccgc gaacagccgg aatcacggcg gttacttttt
    13561 tgcctgcctc aataccggaa acggaagccg ccgcagattt tcgggcggaa ccgccgccga
    13621 acgtatcggt tgtaccatcc gcgtttcggc gtgtgatttt ggcagggact tgggcagttt
    13681 taatgttcgg gctttgaccg gttgcaccgt tgtttgcgcc tgccacgtcc caatacgcct
    13741 gcaagcccaa agccacacag attacagaca aggtgctgac gctgattttc cccgccgcgt
    13801 cggcggaaac gacggcggtc ggtgtaggtg taacgcctgc cttcaggctg gtgttgccgc
    13861 ccagcaaaat catttcttcg gcaaccatag tagcctgaag ggtttgggcg accgccaacg
    13921 ctttcacgtc ctcgaaaccg cgcgcggcgt aatccgcttc aaaggttact tggttttcca
    13981 agccgatggc gcggaattgc gcgttgcgtt ccaccgtttc gtgattgatg acgccgccgc
    14041 gcctgccttc gccgataccg gcgcgttggt tgccgacgtt gatattcgtg acggctttcc
    14101 agttcgagcc gatggtgcgg ccgccgccca cgcgcgggat acggttgcgc aacggggtca
    14161 ataccgggta gagtttttga gacggcgcgg aaaggtcata ggtttgcagg ccggcggtaa
    14221 aactagccgg ctgggtaaaa cctttgtcag gcggcccgcc gcccgcttgt gccgacttca
    14281 tcagttcaat cgtttcttgt gtgagttggt tcacgttcat ttatcgctcc tgataataaa
    14341 aaaaccgcct gtaagcggtg ttacagacgg cctgtttgtt ttgccttaat gagtgtcgcc
    14401 acgtcatcca gcgtgccgtc attctttaca atcggctgaa aaccttttaa cgggtcttcg
    14461 ccgttatctt ctgccttact gatagctttc gtactgcctt tcggcggtac tgcctgtttc
    14521 ttcaggcttt cgatttccgc ctgcgctttg gcaagggcgt cattcgattt tttcagcgcg
    14581 tcttgtgcct ttgccagttc gtcagccgat tccgctttgg caagatcgcc tgatttgccg
    14641 gctttggccg ccaaaccgtc ggccggctta tcggcttcgc ttgccgccaa cgctttcagc
    14701 gattcggcaa ggccggccgc cgattctttg atttgcgcgg taacggcttc atcgatgttg
    14761 tcgtaggcgg cgtcctcaac cagccatttc agcgacatca atacatcagc cggtgatttg
    14821 acttggtaca ttgatttggc ggccgtcccg cctttcggct tgtcggcttt agccaatacc
    14881 gctttcaagg cggcgatttc agattcggac aattcgacgc ttgccgattt tccggcttcg
    14941 tcctttttgc cggcgtcctt atcgccttta tcttcggttt taggcccttt atcgccgtct
    15001 ttaggatttt catcttcctc ttcggttggt ttgtcagacg gcttgccgtc tttatccgcc
    15061 gcccctgcct catctttcgg tttgtccgcc ttaaagcagg taaacaccgc gtcaggattg
    15121 gcagggcggt cgacaaggct gatttccgtc agcttcaagc ccgtgatttg cgacttgttc
    15181 aaatcattgc gggcggtaac gctgccgccg atggaaaagc ctttgtaaac gcctgtcttg
    15241 actttcgtca ccgcaacagg gtcaacgata tgcgccccga aaaatgtgcg cccgtcgtct
    15301 tccacgttga tttcaatcgc cgttcccgcc gcgtttgagc cgtgcatctc gcgcaccgcg
    15361 ccgaacttca tataatcggg aatcgccgcc ttcattgctt ccgccgcgac gacttcgccg
    15421 tccgaatcga ccgcttcgct cgaggcatac ccccaaactt tgaccgtgcc gtcgtcctgc
    15481 gcctccgtct tggcgatttg cgcgtataac ttcgtcattg gtttgctcca aaaaaaagcc
    15541 gccccgctaa ggggcggcaa aacacacccg cctgacccga aggaatcaag attcaggcat
    15601 atcccctgcc aaaacaggca caaccgcgca ccggcagttc ggatgaccgg gtatcgtcaa
    15661 cgcaccgtgg gagaaaggct cgtgcaaacc gattacgccc atcccgccgt tggcattgca
    15721 gacatcggac accttgtcgt cttttgcggt tatccactgc ttgccggcaa ccagccccgt
    15781 ttcttcccag cctatcaggt tgcccatacc gtccgccatc gccgtttccg ttcgggcaat
    15841 ggttcgggcg cgtgcgttgc cgaaagcatg ggattctttc aggcggcctg ccaattcctg
    15901 cacactgtcg ccgtttcgca tggcttcggc tacttgggcg cgtatcattt cgcgcgtccc
    15961 ttcggtgatt tgccactcgg cggcaggatt tcggacaagc ccgccgcccg cccgcttcat
    16021 gccgaccatt tcggcggcgc gttcatgcgc ccacttgacg gcgcggctgc gaatgttcgt
    16081 aaccataccg gcggcaggtt caggcattac gcgcaacaag gcggcaaccg ccccgtcttc
    16141 cgcaacacgc ctgattatcg gctcgaccac atcggacaat cccgaccaat cgccaaaatc
    16201 caagccgttt gcaacaaccc ctgccgcgcg gctcaattcc gccgccaaat ccccggcctg
    16261 ccaatcgacg gccgcaccct caatcagcgc cgcgatttgt tcggccaagc cgtcaatgcg
    16321 tgtcagcaaa taagcctcaa taagcgcggc agattcgtct tcgctcatcg ggctttccga
    16381 ctttcccaac ttttcagccc cttggttcgg cggctcttcg ggctttcggc cgtcttgctt
    16441 atccggttca ggctgcccct gccccggtaa cggctccttg cccagttcgg cgcggatttc
    16501 gtcggcggtc aagatgcctg cgtttttgta gatggcgtag atttcagcct gttctttcgg
    16561 gttgagcgat tcctccccct tccagacaaa ctcatacgcc gccatatcca tgtaacgggc
    16621 aagcacgtcg tcaatcaggg cttttaccca gtttttcagg ctgcccatgc cgtctgaaag
    16681 cgactgctcg cggctcgtct ctgccacgct gcggtttacc tgcgccacga acggcgtagg
    16741 ctcgacacta aacgcaaagc agacgacacg cgccagccat tcgtcgtaaa cgtccttcaa
    16801 cggcggctgc ttcgtctcgc ggaagtttcg ggacaactcg cccggcacga aacgcatttt
    16861 gcgccgctgc gccgtttcgc ccgacagcag caaatcccag tattcttgaa accgcctgat
    16921 gtcgtccgcc gaccacgttt caggcacgcc gactaaagca tcgggcacgc tgcccgccgt
    16981 gtagtattcc agcgcgtgaa cctgccgttt tagggcgata ttcacggtca tgatgatttg
    17041 ctcgacgggc gaatagccgt aaaccttgta acttcggtta ttccgcgaac ggtaaatcaa
    17101 ctcgtcagcc gtgtaatcga ccgccgccat gccgtgcagg atttgctgat acgccgtatc
    17161 gggcggtaac ggcatacgcc ccgtattgtc caaaacgcgc ttaatcgtcg ccccgtccat
    17221 cacttcgagg gcgtacaagc cgccgcccag tgttttgcgc gggtagatgc acggcgcgtc
    17281 aataacaaac aggtcttcca gcaagatgcg cagccagtcc gcccatgtat gctctttatc
    17341 gggcgaccgg aagaacgcaa cggcttcatc gacctttcgg tctttccgtt gcgattcgtc
    17401 gtcttcggtt gattcgacgt cgcgcttctg aatcgtccac ttaaggcact ccatttggtc
    17461 tttacgcgcc tcgatcacca aacgcaatac atcgtagttg tcggcaaggg cgcgtaattg
    17521 tgcaaagcct accgcttcac gttcgcgcgg cttggaatgc ccgacgttgt agaacggctc
    17581 gtaatcaaac cgccgcccct ctgcctgctg cgcggcaggg gccggaggct cgcccgcgtc
    17641 gaaccacccg tccgcgttgc cggtaaaggc gtaacggacg ccggcggcaa cgcgggcaat
    17701 aaagccttgc gataaaggtg tctttttact catttcacag cctcgacctg cgatcgcagg
    17761 aaatcaatca tgcccgtccg ggtatccagc agctcgccaa acgcacggcc caaacagtct
    17821 atttggtcgt catgccggcc gttcgggaac atgcgcattt ccgcaatcag cgcgtccgtg
    17881 tcccatgtgc cgtcgtccaa caccatcaca ttgccgatgt tgacctgtgc cgcgaacggt
    17941 ccggcgcgtg taaccttgtc gcccgattcg gggccggcgg atacggaaaa acccgccaac
    18001 tggcgggtca ggtatagtgt ttgcgatttg cctgcctgcc cggggtcttg cgggatggat
    18061 attttcgttt tcacgccgtc tttttgcgcc gtgttgcgta atatcctgtc ccgctcgtcc
    18121 gcgccgtacc ggccgcgcac gacgttggcg atgatatacc gcccgtcttc cgtaacgcca
    18181 agcctgccgc ctgccgtgta gtcgccgccg tttgcggttg aagccaagtc ccacgcgcgt
    18241 acccatctga tattcccggc aggcaacgcc ttgacaaatt gcaggttgtc aggcttgaac
    18301 gtaccgccgt caggcggggc ggggcgttgc aaatactgcc cggcaaacac atacggcgcg
    18361 gcctgctcca ttcggcgcag tgtttcaata tcatgctttt caggccacaa cgccgtgccg
    18421 tcttcctgaa tggcaggcag gcacaaatgc tcccactctt cgccgttgcc gccgtcaagc
    18481 agccagcccg ccaagtcttt ctcgtgcagg cgttgcataa tcaggataat cggcgtgtca
    18541 gggctgttct tccgggattc gaccgtgttt tgaaaccagt cgatgacgtt ctgccgcctg
    18601 acctcgcttc gcgcttcatc tgctttgtgc gggtcgtcaa tgatgatgca gccgccgaat
    18661 ccctcccgat gcctgcccgc accgaaacct gtaatcgtac cgcccgcacc tgttgcgtac
    18721 atcacgccgc ctgcggttgt tttccagtga tggccgcttt cgcctgccag tgccaaatca
    18781 ggaaaaatcg cccgatactc ttcgtgttgc accaagttcc gaatctgtac ggagttattg
    18841 accgccagcg ccgccgaata gctcgcgtgg ataaactcgc aatcaggcac gcgccccatc
    18901 gcccacgcga taaagttcac gaccgcgatt tccgttttcg agtatcgcgg cggaatattg
    18961 ataatcaggc gtttcgtttc gccgttgaaa acacgctcga gcgcgttgca gattggcgca
    19021 tggtgattcg cccgctgcca aacatagccg cgcctttgat aaaacatccg gcgcgtgaac
    19081 atatacaggc ttgcagaact taaactgcga attactgatg tttcaacatc gtcgaattgc
    19141 cctagtgcca tttcattcta acttcctttg gagaaacggc catacagccc ctcttatgat
    19201 tagcgtttta tgctaaaccc tacgcaacac atcttccgct atcttgcgat attcctcagc
    19261 atcaagccgt acagccgccc tcatgctccc atcgcccgat ttaacgtcaa gctccgattt
    19321 gtcgccgtat ttcttcggcg caatcttgga agccgcccac tttcgggcat ctatctgcaa
    19381 tttcgccttt gaaaccgccg cgctctctgc ttgtgcacta tcggcaatct cgatgatttc
    19441 ttcagcgaaa tagtccgcct gcttttctct cgcgcgcgcg tattggtggc gaaattcttc
    19501 attagcttcc aaccaacggt aaatagtttt cattggcggc acaccatctt cggcgcatat
    19561 tgaacgtagg cttctgccat ttgcgatttt ttcgcatatc ttatcggcca tgtctttcgt
    19621 gtaatctgtc ggacggccta atttgcgttt cgtgccgctc ataaaccctc ctcaaaaaag
    19681 aaaccgtcta actctgaccc ctctcagaat tagacggcaa acacacactc gccacatagg
    19741 aaaaacggaa cgccgctacc tgtacaggca gaagctcaaa ttcggacagc ctaaaacgca
    19801 aaaacccgca cattgttatg tacgggctta aaaattcata tccttcgggc gtgcgaaaat
    19861 ccccgcaagg gtaacgattt gaattataca cctattgccg gaaaaaacaa caggccgtct
    19921 gaagattcag acggcatttg tattccctac tgcatcaaac cgccgacagg ttgcggattt
    19981 cgggcagtat cgggcggatt ttttctgcgt gttccgcgtc ggcgtgtgcg cttaaggctt
    20041 cgagggcgtt tgcggcggct ttgaggcggc tgcgcgtttc cgcccagacc gtccacatcg
    20101 taaccgcctg cctgcagccg agctgcttca gcggcaggga aacgtctctg cccatttgga
    20161 tggcccgcgc gccgtagctg acggcgacgg cgaggtcgta cagggcgttg ccgcttatgg
    20221 gcagggcggg ttgcggcgcg ggtaacggtt cgcggtcgag gacttcgccc gtcaagcccg
    20281 tgtgcagggt cagcgcgtgg acgtaggcga cggcttcggg cagcttcccg gcggggatgt
    20341 cttcgatggc ttcgacgttg aagcgttggt gaatcatact gtacgctgag gagtagtcta
    20401 tgcctttgcg tccgacaagt gcggcaacgg cttggcgcaa tccggtacgg tcgtcggcgg
    20461 tggttttttg tccgacttgg tagccgcctg ttttgcggat ggtgggcagg acttcggatg
    20521 ttacccattt gcggaatttc caagcggttg agccttgttc cattgcttta cggctgcgaa
    20581 gaatcaaaat atataaaccg ctttcgttga tgatgttcac gttaccgccg cctccgtgaa
    20641 tttcagaccg ccctatgtta aacatagacc gctcgtcatc atctaatttt tcaagtgctt
    20701 gcgttgggtt ctggatttct aaagccttac atacatcggc ggcaacaaac caagtcaagc
    20761 cgtctttttc aaaggcacga acgggagaag tagtattgaa attaaatgat tgaattacgt
    20821 tcataatgaa gtttcctagt gagttttctt aatgcccgtt agggcggacg cgtggttaag
    20881 aaccctcact agatgggcgg acttattccc cttacgggta ttgtattcgt cgcccacgcg
    20941 tccataagaa acttcggttg tgccatcgaa acaaacaaca cgaaaggaaa cttacagata
    21001 tgaaaaaatc acattgacgg agtgattgcc gctagtgtgt ggttcttacg ccacgaacag
    21061 gaatataaaa caaaaccccc tgcatatgca aggggttttt tactatttct gttcaatcga
    21121 aacttccact ttattgtctg tgataacgca atatgcccga taatcaatct gcattccaag
    21181 cccgttttta gccgtaaatc cacgggtaac caagacattg ccattctgat ttactccggt
    21241 tgccgtgtct aggatgtgcg ggtcaaacgt tctgggatga ttcaattgag ctttgattgc
    21301 ctcatcacac tgactgatga cggctgaact atcaatcttt ttatcctgtt cagcggttga
    21361 tttccgaccg gaattaaggt cgtcagtaga tacaaaaaag cgtttgccat tcctgcaatc
    21421 tacaaagaaa accatttgtt ttgctttcgg gttgctgcga gaatctgaaa tatcaacagt
    21481 ttctactgca tcgcatgaat cctcccgagc aatatgttcg gctatccgtg gcaaataacc
    21541 attcatttca ttgacagcct tctcgcccca ctgcttgtac aacttcggat aagctttctt
    21601 atcgtactta aattcccgta cgcctgaagc aattttccca tcaatcttct gcttttcggc
    21661 tgccgccttc tcttctggcg ttaattcctt tttcggcaca gcgcacatag cgacaaacag
    21721 caaaacaaaa ataccgccca caatcagctt gattttcttt gctttttttg ccttagccgc
    21781 agaattaacc tgcctttggt tgtattgctg ccgccgctct tctgggtttt gtggttcatt
    21841 ataaagggcg accttcaccg cttgcaggaa tgcgtcgttc ttctccacca gcatgcggcg
    21901 gccatcaaaa aacacaacct ctatcacgcc gccgtcctgc acctcataac ctgcaatatc
    21961 aagcagcgca accttcccac cacgagaaag aacaatacaa tcttttttta agacggcttt
    22021 ccctttatga aaatcgccag ccagtatgtt gatatatgcc atttccccat ctcccattaa
    22081 gaagtgttaa tttccacaat cataccgtaa ccgaaaagaa aatcaaacct tctcaaacag
    22141 caaatcaaaa tcgtcccctg ccgcctgccg tatcgccccg taccacgcgg ccaagcccaa
    22201 atccgtctgc aaatgcaggg gcccctcgcc gcgccgcctg atttcagcct gcaaacgttc
    22261 ctcgtaggct gcctgcgact tcgcaccgat gccgaacgaa atacggacgg cctcttgttg
    22321 cggcgcatcc accttcgccc atgcctgcag agtcagaaac atggcatctt cgccgtatct
    22381 caagccgatt tcaggcttat gcgggcaagc ttcctccccc atataacggc cttcgatact
    22441 caaacatcta tttaggctgc gcgtatcacg gtaacgacgc tcaaaagcac gcgccaagtc
    22501 gttcataaat tcaaattctt gttgattcat agcttgatta accctttttc atgcaacaaa
    22561 accaaagtcc gcattacacc ttccgcgaag gccgtctgaa gttccccttc cgcacaatcc
    22621 gccaagcggt tctatacatc aaaactccca aatgattcca aattctaccg cagcccgcgc
    22681 ctgcaccgtt tcggatatgg cg
//
LOCUS       DAXFZM010000021        22417 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.021, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000021 DAXFZM010000000
VERSION     DAXFZM010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 22417)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22417)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22417
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.021"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            50..640
                     /locus_tag="ACFJAG_000734"
     CDS             50..640
                     /locus_tag="ACFJAG_000734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HFC3980088.1"
                     /translation="MLGLCLLTPASYQNIHVRSWKARRDSGIVKQDLDFSCGAASIAT
                     LLNNFYGRHYSEAEILDKMDKTQMRASFDDMQRIMPELGFEAQGYALPFEQLVQLKIP
                     VIVYLKYRKNNHFSVLNGINGETVLLADPSLGHVSTSKSQFLSAWKTRDGEMEGKILA
                     IVPKNTDFVRNQMFFNKNPVRQTRFTVEQIQMRQKR"
     gene            complement(906..1457)
                     /locus_tag="ACFJAG_000735"
     CDS             complement(906..1457)
                     /locus_tag="ACFJAG_000735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980089.1"
                     /translation="MKVLNGWSDRKMWRVLSALPIGVVFFDLIYGFVLNVLQGLDLQR
                     AVPDSEGVLAVTPDIAFNSLQIVANGGMAAVVCFGLAVVFLLNRSVRRRQVLEIGVFR
                     MLGLVAVLAFSAPSLWEWANALPLLLKGADVVNTGNARYVLTALCMPFPAVSCIIGLV
                     GRFRLQTASGRVAKAGGAVKAGG"
     gene            complement(1616..2287)
                     /locus_tag="ACFJAG_000736"
                     /pseudo
     CDS             complement(1616..2287)
                     /locus_tag="ACFJAG_000736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_021111752.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            2547..4019
                     /gene="pyk"
                     /locus_tag="ACFJAG_000737"
     CDS             2547..4019
                     /gene="pyk"
                     /locus_tag="ACFJAG_000737"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004743 - pyruvate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0030955 - potassium ion binding [Evidence
                     IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HFC3980090.1"
                     /translation="MNQTSRDLTRISHNTKIVATLGPGSNNVELLEDMIRVGGLNVVR
                     FNFSHGTPEFHQENARIVREAAKRAGQEIAIIADLQGPKIRVGKIAGGGIELNKGETL
                     VLDAALEGEGTREAVGLDYRDLPDDVAAGDVLWLDDGLLTLTVESVEGSRIITRVENS
                     HILKSNKGINKRGGGLSAGALTEKDFRDLKTAIAIGCDYLAISFVKSAEDLHIARAKV
                     EEEMKGSTAVRPGLVSKIERVEAIENLDEIILAGDGIMVARGDLAVEVGHAAVPALQK
                     RMIRRARELRRFSITATQMMESMITNPVPTRAEVSDVANAVLDGTDAVMCSAETAVGA
                     YPFETVSQMAIICAAAEKEQDSLNGVAEQTEYPEAVSTNLAIAGGAVSVARAVHAKAI
                     VALTESGSTAFEISRHNITLPIFALTPSVSAQRRMAMYRGVRPLILATSTDHDTALNE
                     VETMLVEHNILHSGDQYIITSGSQMRESGSTNTLEVLRVK"
     gene            4253..5605
                     /locus_tag="ACFJAG_000738"
                     /pseudo
     CDS             4253..5605
                     /locus_tag="ACFJAG_000738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235352.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="OmpP1/FadL family transporter"
     gene            complement(5688..6110)
                     /locus_tag="ACFJAG_000739"
     CDS             complement(5688..6110)
                     /locus_tag="ACFJAG_000739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980091.1"
                     /translation="MAGCLTDLENCLEKYLEQFGPVSESIEACTAKLQEQPSFFNRLM
                     KANDKLNRQIDVLQKQSAAIHNEAYIEMNTLLYRHREVVSIHNRKADYAEKGKERIAL
                     FPRGLNGITKLPAAVLLPERPYHFDMKEVLYIFSRIPR"
     gene            complement(6293..6442)
                     /locus_tag="ACFJAG_000740"
     CDS             complement(6293..6442)
                     /locus_tag="ACFJAG_000740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980092.1"
                     /translation="MPSETLLSVSDGILTNTVRRRKTAGFSCVSYADVSTHRTAHKAS
                     PYVPS"
     gene            complement(6460..6657)
                     /locus_tag="ACFJAG_000741"
     CDS             complement(6460..6657)
                     /locus_tag="ACFJAG_000741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980093.1"
                     /translation="MNTVPKSRIPVKPLPEKTTAEAKVEKWRQLGADHGLSGEWAVAA
                     RLGENGFTEEQMENIANLFGR"
     gene            complement(6667..7683)
                     /locus_tag="ACFJAG_000742"
     CDS             complement(6667..7683)
                     /locus_tag="ACFJAG_000742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme inhibitor LprI family protein"
                     /protein_id="HFC3980094.1"
                     /translation="MYRKLIALPFALLLAACGREEPPKALECANPAVLQDIRGSIQET
                     LTQEARSFAREDGRQFVDADKIIAAAYGLAFSLEHASETQEGGRTFCIADLNITVPSE
                     TLADAEANSPLLYGETSLADIVQQKTGGNVEFKDGVLTAAVRFLPAKDARTAFIDNTV
                     GMATQTLSAALLPYGVKSIVMIDGKAVTKEDAVRVLSGKAREEEPSKPTPEDILEHNA
                     AGGDAGVPQAAEGAPEPEILHPDDVERADTVTVSRGEVEEARVQNQRAESEITKLWGG
                     LDTDVQKELVGEQRKWAQEKISNCRQAAAQADRQEYAEYLKLQCDTRMTRERIQYLRG
                     YSID"
     gene            complement(7782..8996)
                     /gene="gltS"
                     /locus_tag="ACFJAG_000743"
     CDS             complement(7782..8996)
                     /gene="gltS"
                     /locus_tag="ACFJAG_000743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015501 - glutamate:sodium symporter
                     activity [Evidence IEA];
                     GO_process: GO:0015813 - L-glutamate transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/glutamate symporter"
                     /protein_id="HFC3980095.1"
                     /translation="MEWAFNSYYTLIAATLVLLVGKVLVKKIKILRDFNIPEPVAGGL
                     IAAIILFALHEAYGVSFKFEKPLQNAFMLIFFTSIGLSADFSRLKAGGLPLVVFTAIV
                     GGFILVQNFVGVGLATALGLDPLIGLITGSVSLTGGHGTSGAWGPNFETQYGLVGATG
                     LGIASATFGLVFGGLIGGPVARRLINKMGRKPVENTKQDQDDNADDVFEQAKRTRLIT
                     AESAVETLAMFAACLAFAEIMDGFDKEYLFDLPKFVWCLFGGVVIRNILTAAFKVNMF
                     DRAIDVFGNASLSLFLAMALLNLKLWELTGLAGSVTVILAVQTAVMVLYATFVTYVFM
                     GRDYDAAVLAAGHCGFGLGATPTAVANMQSVTHTFGASHKAFLIVPMVGAFFVDLINA
                     AILTGFVNFFKG"
     gene            complement(9249..9530)
                     /locus_tag="ACFJAG_000744"
     CDS             complement(9249..9530)
                     /locus_tag="ACFJAG_000744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980096.1"
                     /translation="MKQIKASDFTDEHFGLPTILDILSELEKPQPRTDSRPQTTTQRA
                     CPNQFGDGGCVCEVEAVSPTAGMYSDRCSGGFCPRFFCYFKYVYSHDAV"
     gene            complement(9549..10673)
                     /locus_tag="ACFJAG_000745"
     CDS             complement(9549..10673)
                     /locus_tag="ACFJAG_000745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HFC3980097.1"
                     /translation="MSNNQPNSQIYEDYWAFTNAFTNYNDQKFCTALNICLDFIDANQ
                     DQPYSNELYEALQQNIAQDSVMASQRTSKAMNLASVRKAINQFVKMGFIEPFLSSYTP
                     LSRDYVQARTNRKRQTLLSKIVYTHSGFQRSVTENSNIRQINFLIKTLVEHPQGKLNK
                     KEIAAMMLVDLKTFQQDYLTETELNDYFQQGIESGFIERKYNQISYLWNLLDKLDDLK
                     RVGDDLYFAEDAQRIFGNLDEITVRKRDPYLHRLYKNQLQEESEEHYGNVKCMLEKLA
                     YPVLIASHIKPFILSDDTEAYDPNNGLLLSRTLDSLFDLKYISFDDEGNMVKSKRLSD
                     DVWRRWCDVKLDNNLLNDKRKSYLAYHRELMLQEDQEFHI"
     gene            complement(10736..11743)
                     /locus_tag="ACFJAG_000746"
     CDS             complement(10736..11743)
                     /locus_tag="ACFJAG_000746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009007 - site-specific
                     DNA-methyltransferase (adenine-specific) activity
                     [Evidence IEA];
                     GO_process: GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HFC3980098.1"
                     /translation="MNKKYPKINYIGNKEKIASWICDQLPSDVDTVADVFSGGCSFAY
                     EAKKRGYRVITNDILAINYQIALALIENNHETLNDDDVAMIFSGSPHAGFMSQRYSEK
                     FYFHDECQQLDLYCKNIGKLNNQYKRALAFTLMRRAMIRKMPYSRFTIPWEKVKQLRD
                     EEYSYAKYGRRRAYHNESFQSHFLQNLDDYNQAVFNNGWRHHAFNQDIFDLLPNIQAD
                     AVYLDPPYTGTMNNYFGFYGLLDSYITSSIPKPFANHFMDKKQAVELFKRVINHLKPF
                     KYWLLSYNNASYPNRDELEEMLGKNGRNVQILETPHVYKVTGKEKKQSHKEILFLVEN
                     T"
     gene            complement(11736..12737)
                     /locus_tag="ACFJAG_000747"
     CDS             complement(11736..12737)
                     /locus_tag="ACFJAG_000747"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003886 - DNA
                     (cytosine-5-)-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HFC3980099.1"
                     /translation="MHTPLTYIDLFSGAGGLSLGFEQAGFQQLLSVEMESDYCQTYRT
                     NFPRHQLLQKDLTTLTEQDLTNCLNGQSVDLVIGGPPCQGFSMAGKIGRTFTDDPRNH
                     LFKEFVRIVKIVQPYFFVMENVARLYTHNSGKTRIEIIQAFQNIGYSVECKILSAADF
                     GVPQIRSRVIFIGRRDKGKISFPEPLQISHQTVGSAIGHFPKLAAGESNPHVANHEAM
                     NHSAQMLEKMAFVKNGGNRNDIPEPLRPKTGDIRKYIRYNSNKPAVCITGDMRKVFHY
                     EQNRALTVRELAALQSFPDNFIFCGSKIAQQQQVGNAVPPLLAKAIAESILKMSENE"
     gene            complement(12768..15041)
                     /locus_tag="ACFJAG_000748"
     CDS             complement(12768..15041)
                     /locus_tag="ACFJAG_000748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003729 - mRNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Tex family protein"
                     /protein_id="HFC3980100.1"
                     /translation="MNITRILSQELSATTVQINAAIELLDDGATVPFIARYRKEATGG
                     LDDTQLRQLAERLQYLRELEERKAVVLKSIEEQGKLSDDLRAQIEAADNKTALEDLYL
                     PYKPKRRTKAQIAREHGLQPLADVLLAEQPQDVEAAAQGYLNENIPDAKAALDGARAI
                     LMEQFAEDAELIGTLRDKLWNEAEIHTQVVEGKETEGEKFSDYFDRREPVRAMPSHRA
                     LAVLRGRNEGVLNIVLKYQPDDTPITQQSEYEQIIARRFKVSDGHKWLRDTVRLTWRA
                     KIFLSLELEALNRLKEAADTDAITVFARNLKDLLLAAPAGRLTTLGLDPGYRNGVKCA
                     VVDDTGKLLDTVIVYLHQENNMLATLSRLIKQHGVKLIAIGNGTASRETDKIAGELVR
                     GMPESSLHKIVVSEAGASIYSASELAAREFPDLDVSLRGAVSIARRLQDPLAELVKID
                     PKSIGVGQYQHDVNQSRLAKSLDAVVEDCVNAVGVDANTASAPLLARISGLNQTLAQN
                     IVAYRDENGAFDSRKKLLKVPRLGEKTFEQAAGFLRINGGKEPLDASAVHPEAYPVVA
                     KMLAQQGITAAELIGNRERVKQIKASDFTDERFGLPTILDILSELEKPGRDPRGAFQT
                     ASFAEGIHEISDLQVGMILEGVVSNVANFGAFVDIGVHQDGLVHISALSNKFVQDPRE
                     VVKAGDVVKVKVLEVDAARKRIALTMRLDDEPGGAKHKMPSENRSRERTAGRKPQRND
                     RAPTNSAMADAFAKLKR"
     gene            15156..16172
                     /gene="galE"
                     /locus_tag="ACFJAG_000749"
     CDS             15156..16172
                     /gene="galE"
                     /locus_tag="ACFJAG_000749"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003978 - UDP-glucose 4-epimerase activity
                     [Evidence IEA];
                     GO_process: GO:0006012 - galactose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HFC3980101.1"
                     /translation="MTVLITGGTGFIGSHTAVSLVQSGYDAVILDNLCNSSAAVLPRL
                     RQITCRNIPFYQGDIRDCQILRQIFSEHEIESVIHFAGLKAVGESVAEPTKYYGNNVY
                     GSLVLAEEMARAGVLKIVFSSSATVYGDAEKVPYTEDMRPGDTANPYGASKAMVERML
                     TDIQKADPRWSVILLRYFNPIGAHESGLIGEQPNGVPNNLLPYICQVASGRLPQLSVF
                     GGDYPTPDGTGMRDYIHVMDLAEGHIAAMKAKGGVAGVHLFNLGSGRAYSVLEIIRAF
                     EAASGLHIPYRIQPRRAGDLACSYADPSHTKQQTGWETKRGLQQMMEDSWRWVSRNPG
                     RYGD"
     gene            16173..17213
                     /gene="rfbB"
                     /locus_tag="ACFJAG_000750"
     CDS             16173..17213
                     /gene="rfbB"
                     /locus_tag="ACFJAG_000750"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008460 - dTDP-glucose 4,6-dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009225 - nucleotide-sugar metabolic
                     process [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HFC3980102.1"
                     /translation="MQTAGKKNILVTGGAGFIGSAVVRHIIQNTRDSVVNLDKLTYAG
                     NLESLTDIADNPRYAFEQVDICDRAELDRVFAQYRPDAVMHLAAESHVDRAIGSAGEF
                     IRTNIVGTFDLLEAARAYWQQMPSEKREAFRFHHISTDEVYGDLHGTDDLFTETTPYA
                     PSSPYSASKAAADHLVRAWQRTYRLPSIVSNCSNNYGPRQFPEKLIPLMILNALSGKP
                     LPVYGDGAQIRDWLFVEDHARALYQVVTEGVVGETYNIGGHNEKTNLEVIKTICALLE
                     ELAPEKPAGVARYEDLITFVQDRPGHDARYAVDAAKIRRDLGWLPLETFESGLRKTVQ
                     WYLDNKTRRQNA"
     gene            17318..18184
                     /gene="rfbA"
                     /locus_tag="ACFJAG_000751"
     CDS             17318..18184
                     /gene="rfbA"
                     /locus_tag="ACFJAG_000751"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008879 - glucose-1-phosphate
                     thymidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0045226 - extracellular polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HFC3980103.1"
                     /translation="MKGIILAGGSGTRLYPITRGVSKQLLPVYDKPMIYYPLSVLMLA
                     GIRDILVITAPEDNAAFQRLLGDGSDFGIRLQYAVQPSPDGLAQAFIIGEEFIGNGNV
                     CLILGDNIFYGQSFTQTLKQAAAKTHGATVFGYRVKDPERFGVVEFDENFNALSIEEK
                     PQQPKSDWAVTGLYFHDNRAVEFAKQLKPSARGELEISDLNRMYLEDGSLSVQILGRG
                     FAWLDTGTQESLHEAASFVQTVQNIQNLHIACLEEIAWRNGWLTKKDVETRAKHLEKT
                     AYGQYLLHLIGK"
     gene            18323..18880
                     /gene="rfbC"
                     /locus_tag="ACFJAG_000752"
     CDS             18323..18880
                     /gene="rfbC"
                     /locus_tag="ACFJAG_000752"
                     /EC_number="5.1.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008830 - dTDP-4-dehydrorhamnose
                     3,5-epimerase activity [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HFC3980104.1"
                     /translation="MDIIDTALPDVKLLKPQVFTDGRGFFMETFRDGWFKENIADRTF
                     VQENHSNSSKGVLRGLHYQTENTQGKLVRVVVGEVFDVAVDMREGSPTFGKWAGATLS
                     AQNRYQLWIPEGFAHGFCVLGDAAEVVYKCTDYYNPETEQVLIWNDPAIGIGWPLQTA
                     PLLSPKDLAGKTWAQAEKLRLTLSR"
     gene            complement(18924..20942)
                     /locus_tag="ACFJAG_000753"
     CDS             complement(18924..20942)
                     /locus_tag="ACFJAG_000753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0035673 - oligopeptide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006857 - oligopeptide transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OPT family oligopeptide transporter"
                     /protein_id="HFC3980105.1"
                     /translation="MNKSLSGSVEKYRELTLRGMILGALITVIFTASNVYLGLKVGLT
                     FASSIPAAVISMAVLKFFKGSNILENNMVQTQASAAGTLSTIIFVLPGLLMAGYWSGF
                     PFWQTTLLCIAGGILGVIFTIPLRYVMVVKSDLPYPEGVAAAEILKVGGHEEGDDRQG
                     GSGIKELAAGGALAGLMSFCAGGLRVIADSASYWFKSGTAIFQLPMGFSLVLLGAGYL
                     VGLTGGIAILLGISIAWGIAVPYFSSHIPQPSDMEMAAFAMKLWKEKVRFIGAGTIGI
                     AAVWTLLMLLKPMVEGMKMSFKSFGGGAPATERAEQDLSPKAMIFWVLSMMFILGVSF
                     YHFIGDSHITGGMAWLLVAVCTLLASVIGFLVAAACGYMAGLVGSSSSPISGVGIVSI
                     VVISLVLLLVGESGGLLADEANRKFLLALTLFCGSAVICVASISNDNLQDLKTGYLLK
                     ATPWRQQVALIIGCIVGALVISPVLELLYEAYGFTGAMPREGMDAAQALAAPQATLMT
                     TIASGIFAHNLEWAYIFTGIAIGAVLIVVDLVLKKSSGGKLALPVLAVGMGIYLPPSV
                     NMPIVAGAVLAAVLKHIIGKKAENREGRLKNADRIGTLFAAGLIVGESLIGVIMAFII
                     AFSVTNGGSDAPLALNLQNWDAAASWLGLAFFVTGMFFFAQRVLKAGR"
     gene            complement(21137..22258)
                     /gene="dnaJ"
                     /locus_tag="ACFJAG_000754"
     CDS             complement(21137..22258)
                     /gene="dnaJ"
                     /locus_tag="ACFJAG_000754"
                     /EC_number="1.8.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HFC3980106.1"
                     /translation="MSNQDFYATLGVARAATDDEIKKAYRKLAMKYHPDRNPDNKEAE
                     EKFKEVQKAYETLSDKEKRAMYDQYGHAAFEGGGQGGFGGFGGFGGAQGFDFGDIFSQ
                     MFGGGSGRAQPDYQGEDVQVGIEITLEEAAKGVKKRINIPTYEACDVCNGSGAKPGAS
                     PETCPTCKGSGTVHIQQAIFRMQQTCPTCRGAGKHIKEPCVKCRGVGRNKAVKTVEVN
                     IPAGIDDGQRIRLSGEGGPGMHGAPAGDLYVTVRIRAHKIFQRDGLDLHCELPISFAM
                     AALGGELEVPTLDGKVKLTVPKETQTGRRMRVKGKGVKSLRSSATGDLYCHIVVETPV
                     NLTDRQKELLEEFERISTGLENQTPRKKSFLDKLRDLFD"
BASE COUNT         5661 a         6137 c         5334 g         5285 t
ORIGIN      
        1 aaattgataa attatgcggc tttgattggt ttcgccccaa atatagtttt tgcttggcct
       61 atgtttgttg acccccgctt cttaccaaaa catccatgta cggagttgga aagcacggcg
      121 agattccggc atagtaaaac aagatttgga tttttcttgc ggcgcggctt cgattgccac
      181 gttactgaat aatttttatg gcagacatta ttctgaagcg gaaatcttag acaaaatgga
      241 taaaacccaa atgcgtgctt cttttgatga tatgcaacgc ataatgcccg aactgggttt
      301 tgaagcacaa ggttatgctt tgccatttga acagttggta caactaaaaa ttcctgtaat
      361 tgtgtattta aaataccgta aaaacaacca tttttcggta ttgaacggta ttaacggaga
      421 aactgttttg ctggctgatc catcgctggg gcacgtctca acgagcaaat cacaattctt
      481 gagcgcatgg aaaacacgtg atggcgaaat ggaaggaaaa attttagcca tcgtgccaaa
      541 aaatactgat tttgttagaa atcagatgtt ttttaataaa aatcccgttc gtcaaacacg
      601 ttttacggta gaacaaatcc aaatgcggca aaaacgataa taaaccgatt tttgcccatt
      661 tattttatat agtaatcagg acaaggcgac gaagccgcag acagtacaaa tagtacggaa
      721 ccgattcact tggtgcttca gcaccttaga gaatcgttct ctttgagcta aggcgaggca
      781 acgccgtact ggtttttgtt aatccactat aaaagcaaag aaaccgccat tagcactaca
      841 cccccccaag ctgcggctgc caaacacatc ggctgcttct cgacgcaccc gctgaaaaat
      901 gcgccctatc cgcccgcctt gaccgcaccc cctgcctttg ccaccctgcc cgatgccgtc
      961 tgaagcctga accgccctac cagcccgatg atgcacgaca ccgccggaaa gggcatacac
     1021 aaagccgtca gcacataacg cgcattcccc gtattgacca cgtccgcgcc cttcagcagc
     1081 agcggcagcg cgttcgccca ctcccacagc gaaggcgcgc tgaacgccaa taccgccacc
     1141 agccccaaca tccggaacac cccgatttcc aagacctgcc gccgccgcac cgaacggttg
     1201 agcaaaaaca caaccgccaa cccgaaacag accaccgccg ccataccgcc gttggcgaca
     1261 atctgcaaac tgttgaacgc aatatcgggc gtaaccgcca acacgccttc cgaatccggc
     1321 acggcacgct gcaaatccaa cccctgcaac acattcaaca caaaaccgta gatcaaatca
     1381 aaaaacacca cgcctatcgg caaagcactc aaaacccgcc acatcttcct atctgaccaa
     1441 ccgttcaaaa ccttcatttt atagtggatt aaatttaaac cagtacggcg ttgcctcgcc
     1501 ttgccgtact atttgtactg tctgcggctt cgtcgccttg tcctgattta aatttaatcc
     1561 actatacccg accacgcaag ccgccgaaca aaaaataagg ggctgtccta gataactagg
     1621 ataaactcga ttttactaat tgttttaaaa tggaacaaga acttttatct cactgttgtt
     1681 aaaacgccat tcgcactcct ttaaatacag ctcaaaatgc gctttgggaa tgccgttaaa
     1741 cttgcgtaaa tgacgttttg cctgattcca aaagttctca attccattaa tatggttttg
     1801 tcgttcggca aaatgtgtgc tgtgattgat acgaaaacga agtttcagcg aagctaaaat
     1861 ggctaaattc gctcacatct aatacatcat agctacgata acaatccgta taaacaatac
     1921 tgtcaggttt cacttgttca cggataatag gaaataaagt agcggtttga gtattcggta
     1981 ctgtaaccgt ataaacctta ccatttcgct tcaaaagacc gaatacggcg actttaccgg
     2041 cagcaccgcg accgcgtttg cctttgcgtt gtccgccaaa ataactttca tctgcttcta
     2101 cttcgccatc aaacatttcc aaatgcggac tgttttgata aataagtaat cgtaaacgat
     2161 gaaaataata ggctgcggta tttttattaa cgcctactaa ctctgctgcc gttcttgcag
     2221 ttacacctgc gacaaacagt tcaatgagtt tattttgttt atactggctt agacgacttt
     2281 ttctcatagg gataattcta acttaatttg aatttcccta gttatctagg acagccccaa
     2341 aataaattta gcctaaatca taaaaccgtg taattttgca ccaaaaaagg cggtttgcag
     2401 gtaaaatatc aaaccattaa tttaaatcat atttttacag aatattccgc cgcgttcacc
     2461 aaatggacat caaaccggtt ccaaatttct gtaattttgc aacaaaatac cgcaaaacac
     2521 ccgattgaga ccgaaaggac tttcatatga accagacaag ccgcgatctg acccgcatca
     2581 gccacaacac caaaatcgtc gccacccttg ggccgggcag caacaacgtc gaactgttgg
     2641 aagacatgat ccgcgtcggc ggcctgaacg tcgtccgctt caacttcagc cacggcacgc
     2701 ccgaattcca tcaggaaaac gcccgcatcg tgcgcgaggc ggcaaaacgc gccggacagg
     2761 aaatcgccat cattgccgat ctgcagggcc cgaaaatccg cgtgggcaaa atcgccggcg
     2821 gcggcatcga attgaacaaa ggcgaaacat tggtactcga tgccgcgctc gaaggcgaag
     2881 gcacgcgcga ggcggtcggt ttggactacc gcgacctgcc cgacgacgtt gccgcaggcg
     2941 atgtcttgtg gctggacgac ggcctgctga ccctgaccgt ggaatccgtc gaaggcagca
     3001 ggattatcac aagggtggaa aacagccaca tcctgaaaag caacaaaggc atcaacaaac
     3061 gcggcggcgg tttgtccgca ggcgcgttga ccgaaaaaga cttccgcgac ctgaaaaccg
     3121 cgattgccat cggttgcgac tatctcgcca tcagctttgt gaaatccgcc gaagacctgc
     3181 acatcgcgcg cgccaaagtc gaagaggaaa tgaagggcag cactgccgtc cgccccggtt
     3241 tggtttccaa aatcgaacgc gtagaagcga ttgaaaacct tgatgaaatc atccttgccg
     3301 gcgacggcat tatggttgcg cgcggcgact tggcggtcga agtcggacac gccgccgtcc
     3361 ccgccctgca aaaacggatg atccgccgcg cccgcgagtt gcgccgcttc agcattacgg
     3421 cgacgcaaat gatggaatcg atgattacca accccgtgcc gacccgcgcg gaagtcagcg
     3481 atgtggcaaa cgcggtattg gacggcaccg atgcggtgat gtgttccgcc gaaaccgccg
     3541 tcggcgcgta tccgtttgaa accgtcagcc aaatggcgat tatctgcgcg gctgcggaaa
     3601 aagaacagga ttcgctcaac ggcgttgccg aacagacaga gtatcccgaa gccgtcagca
     3661 ccaacttagc gattgccggc ggcgcggtca gcgtggcgcg cgcggttcac gccaaagcca
     3721 tcgtcgccct gaccgaaagc ggttcgaccg cctttgaaat cagccgccac aatattaccc
     3781 tgccgatttt cgcgctgacc ccgagcgttt ccgcccaacg ccgtatggcg atgtaccggg
     3841 gcgtgcgccc gctgattttg gcaaccagca ccgaccacga cacggcgttg aacgaagtcg
     3901 aaacgatgct ggtggaacac aacatcctgc attccggcga ccagtacatc atcaccagcg
     3961 gctcgcaaat gcgcgaatcc ggttcgacca atacgctgga agtgctgcgc gtcaaataat
     4021 ccgccctgag tggaaaatgc cgtctaaagc cgatactgtc gggcttcaga cggcatttta
     4081 tttgcattcc gtcaggtaaa accgaaagaa ttgtgcaaat ccggcaacat cggataaaat
     4141 cgagtgccta tactaaagcg aaacaaggca tttccgactg ccttttttat ttgtccaccg
     4201 tccgcctttt tacggaaacc gaaatgaccc ctttcacact gaaaaaaccg tcctgctgct
     4261 cggcactgcc tttgccgccg catctgtcca cgcatccggc taccacttcg gcacacagtc
     4321 ggtcaacgcg caaagcacgg caaatgccgc cgacgcgtcg accatcttct acaatcccgc
     4381 cggcctgacc aaactcgaca gcagccagat ttccgtcaac gccaacatcg tgctgcccag
     4441 cattcattat gaagcagatt ccgccaccga ctttaccggg cttcccgtcc aaggttctaa
     4501 aaacggcaaa atcaccaaaa ccacggtcgc accccacatt tacggcgcat acaaagtcaa
     4561 cgacaatctg accgtgggct tgggcgtgta cgtccccttc ggctctgcca ccgaatacga
     4621 aaaagattcc gtgttgcgcc acaacatcaa caaactcggt ctgaccagca tcgccgtcga
     4681 acctgtcgcc gcgtggaaac tcaacgaacg ccattccttc ggcgcaggca tcatcgccca
     4741 acataattcc gccgaactgc gcaaatatgc cgactgagga atcccaaaaa aagcgcaaat
     4801 gctgcaagca acaccttcta atcctactgc cgctgctcaa atcaaggccg acggacacgc
     4861 cgatgtcaaa ggcagcgatt ggggcgtcgg ctaccaactg gcgtggatgt gggacatcaa
     4921 cgaccgcgcg cgcgtgggcg tgaactaccg ttccaaagtt tcacacacgc tcaaaggcga
     4981 tgccgaatgg gcggcagacg gcgcggcggc gaaacaacag tggaatgaca atatgctcac
     5041 accgctcggt tacacggcga atgaaaaagc ccgcgtcaaa atcgtaacgc ctgagtcttt
     5101 gtccgtacac ggcatgtaca aagtgtccga caaagccgac ctgttcggcg acgtaacttg
     5161 gacgcgccac agccgcttca ataaggcgga actgtttttt gaaaaagaaa aaaatattgc
     5221 taatggcaaa aaatccgacc gcaccaccat cacccccaac tggcgcaaca cctacaaagt
     5281 cggcttgggc ggttcttatc aaatcagcga accgctgcaa ctgcgcgtcg gcatcgcttt
     5341 tgacaaaccg cctgtccgca acgccgacta ccgcatgaac agcctgcccg acggcaaccg
     5401 catctggttc tccgccggca tgaaatacca tatcggcaaa aaccacgtcg tcgatgccgc
     5461 ctacacccac atccacatca acgacaccag ctaccgcacg gcgaaggcaa gcggcaacga
     5521 tgtggacagc aaaggtgcgt cttgcgcacg tttcaaaaac cacgccgaca tcatcggcct
     5581 gcaatacacc tacaaattca aataaacgtt acaccgtttg aatataaaaa tgccgtctga
     5641 aacagatttc cgtttcagac ggcattttta tccggcagcc gatacgccta tctcggtatt
     5701 cgggagaata tatacagaac ctccttcata tcaaaatggt agggacgctc gggcaacagg
     5761 acggcggcag gcagcttggt gatgccgttc aaaccgcgcg ggaacagcgc aatccgctct
     5821 ttgccctttt ccgcataatc tgctttgcgg ttgtggatgg aaactacttc gcgatggcgg
     5881 taaagcagcg tgttcatttc gatataggct tcgttgtgga tggctgccga ctgtttctgc
     5941 aacacgtcaa tctgcctgtt gagcttgtcg ttggctttca tcagcctgtt gaagaacgac
     6001 ggttgctcct gcagtttggc ggtacaggct tcgatacttt ccgataccgg cccgaactgt
     6061 tcgaggtatt tttccagaca gttttccaag tcggtcaggc agccggccat cttgcgggaa
     6121 aattcttctt caggctttcc ctgccgaatg gacaatatag tggattaaca aaaatcagga
     6181 caaggcgacg aagccgcaga cagtacaaat agtacggcaa ggcaaggcga ggcaacgccg
     6241 taccggtttt tgttaatcca ctatatttgg gaggggcgta accccttccg aatcaggacg
     6301 gcacataggg cgacgcttta tgtgccgtcc tgtgtgttga aacatcagca taggaaacac
     6361 aggaaaagcc ggctgttttg cgcctgcgta ccgtattggt caaaatgccg tctgaaaccg
     6421 acaacagggt ttcagacggc atttccgtca attttccctt tatctgccga acaggttggc
     6481 gatattttcc atctgttctt cggtaaaacc gttttcgccc aatctggcgg caactgccca
     6541 ttcgcccgac aaaccgtggt ccgcaccgag ctgccgccat ttttcgactt tggcttcggc
     6601 tgtggttttt tcgggcagcg gtttgacggg aatcctgctt ttggggacgg tattcatcgg
     6661 tttgccctaa tcgatggaat agccgcgaag atactgtatc cgttcgcgcg tcatccgcgt
     6721 gtcgcattgg agcttgaggt attcggcgta ttcctgccgg tctgcctgcg cggcggcttg
     6781 tcggcagttg ctgatttttt cctgcgccca cttgcgctgt tcgccgacca actctttttg
     6841 cacgtcggta tcgagtcctc cccaaagttt ggtaatttcg gattccgcac gttggttttg
     6901 tacgcgcgcc tcttccactt cgccccgtga tacggtaacg gtatcggcac gctcgacgtc
     6961 gtcgggatgc aggatttcgg gttcgggcgc gccttctgcg gcttggggta cgcccgcatc
     7021 gccgccggcg gcattgtgtt ccaaaatgtc ttcgggggtg ggtttggacg gttcttcttc
     7081 acgggctttg ccgctcaaaa ccctgaccgc gtcttctttt gtcaccgcct tgccgtctat
     7141 catcacgatg ctcttcacgc cgtaaggcag caacgcggca gacagcgttt gcgtcgccat
     7201 accgaccgtg ttgtcgataa atgccgtccg agcgtctttg gcgggcagga agcggacggc
     7261 tgccgtcaat acgccgtctt taaactcgac attgccgccc gtcttctgct gcacgatgtc
     7321 tgccaaagac gtttccccat acagcagggg gctgtttgcc tcggcatcgg caagcgtttc
     7381 agacggcacg gtaatgttca aatcggcgat acagaacgtg cgcccgcctt cctgcgtttc
     7441 cgaagcgtgt tccaaagaaa acgccaaacc gtaggcggcg gcgataattt tgtcggcatc
     7501 gacaaactgc ctgccgtctt cgcgcgcgaa agaacgcgct tcctgcgtga gcgtttcctg
     7561 aatactgccg cgtatgtcct gcaacacggc ggggttggcg cattccaacg ccttgggcgg
     7621 ttcttccctg ccgcacgctg caagcagcag ggcaaacggc agcgcaatga gtttccgata
     7681 catgatgttc cttccaaacg gtgcagaccg atggcggcta tcatagcaaa agcacctgca
     7741 ggcggtaaac cttgcaggcg ctttgtcgga aaggcggaaa atcagccttt aaagaaattc
     7801 acaaaaccgg tgagaatcgc ggcattaatc aaatcgacaa agaacgcgcc gaccataggc
     7861 acaatcaaaa acgccttatg cgacgcgccg aaagtatgcg tgacggactg catatttgcc
     7921 accgccgtcg gcgttgcgcc caaaccgaaa ccgcagtggc cggcagccaa tactgcggca
     7981 tcatagtcgc gccccataaa gacataggta acaaaagtcg cgtacaaaac catcactgcg
     8041 gtttgtactg caagaatcac ggttacagac cccgccaaac cggtcagctc ccacagtttc
     8101 aaattcagca acgccattgc caagaaaagc gaaagcgaag cattgccgaa cacatcgatg
     8161 gcacggtcga acatattgac cttgaatgcg gcggtaagga tgttgcggat aaccacgccg
     8221 ccaaacagac accacacgaa tttgggcagg tcgaacaggt attctttgtc gaagccgtcc
     8281 ataatctcgg caaacgccag acacgcggca aacatggcaa gcgtttcaac ggcagattcc
     8341 gccgtaatca ggcgggtgcg ttttgcctgc tcgaacacgt cgtccgcgtt gtcgtcctga
     8401 tcctgttttg tgttttcaac cggtttgcgg cccattttgt tgatcaggcg gcgcgcaacc
     8461 ggcccgccga tcaggccgcc gaacaccagc ccgaaagtag ccgaagcaat acccaaaccg
     8521 gttgcgccga ccaagccgta ttgcgtttca aaattaggtc cccacgcacc tgacgtgccg
     8581 tgtccgcccg tcagcgacac cgaaccggta atcagaccga tgagcgggtc caaacccaaa
     8641 gccgtagcca gtccgacccc gacaaagttt tgcaccaaga taaatccgcc cacaatcgcg
     8701 gtaaaaacca ccagcggcaa accgcccgcc ttcaaacggg aaaaatccgc gctcaagccg
     8761 atggacgtga agaaaatcag cataaacgca ttttgcagcg gtttctcaaa tttgaagctc
     8821 acgccgtacg cctcgtgcag cgcaaacagg ataatcgcgg caatcagccc gcccgccacg
     8881 ggttcgggga tgttaaaatc acgcaagatt ttgattttct taaccaaaac cttgccgacc
     8941 aacaaaacca aagtggcggc aatcaaggtg taataactgt taaacgccca ttccatatcg
     9001 tttgacctcc taaaatgttt ttctttatat ccgcccgaag gggacgcaag cgcgaagata
     9061 ttaggggaat agttaaggct tgtcaaagaa tcgccgtttt ttatagtgga ttaaatttaa
     9121 accagtacat cgttgactcg ccttgccgta ctatctgtac tgtctgtggc ttcgtcgcct
     9181 tgtcctgatt taaatttaat ccactataca actatttttt acaaacaaaa tgccgtccga
     9241 aactccgttc agacggcatc atgggaatac acatatttga aataacagaa aaagcggggg
     9301 caaaacccgc cgctgcatct gtcgctgtac atccctgctg tcggacttac cgcttcaact
     9361 tcgcaaacgc atccgccatc gccgaattgg ttgggacacg ctcgttgcgt tgtggtttgc
     9421 ggccggctgt ccgttcgcgg ctgcggtttt tccagctcgg acagaatgtc cagaatggtc
     9481 ggcagtccga agtgttcgtc ggtgaagtcg gacgctttga tttgcttcac gcgctcgcgg
     9541 ttaactgcct aaatatgaaa ttcttggtct tcttgtagca taagttctcg atgatatgcc
     9601 aagtaagatt tacgtttgtc gttgagcaga ttgttatcta gcttcacatc acaccaacgt
     9661 cgccaaacat catctgataa ccgcttagat ttcaccatat ttccttcatc atcaaacgaa
     9721 atatatttca aatcaaatag gctatccaag gtacgactta atagcaagcc gttatttggg
     9781 tcgtatgctt cggtatcatc cgacaggatg aaaggcttaa tatgactggc aatcaataca
     9841 ggataggcaa gtttttccag catacatttc acattaccgt aatgttcttc actttcttct
     9901 tgaagttggt ttttgtatag gcgatgtaaa taagggtcgc gtttccttac agtaatttca
     9961 tccaaattac caaaaatacg ttgggcatcc tcagcaaaat ataagtcatc acctactcgt
    10021 tttaagtcgt ctaatttgtc taataggttc cataaataac ttatttgatt gtattttcgt
    10081 tcaataaatc ctgattctat tccctgttga aaataatcat tcaattctgt ttcggttaga
    10141 taatcttgtt gaaaggtttt taagtctact aacatcatgg cggcaatttc ttttttattt
    10201 agcttgcctt gtggatgctc gaccagcgtt ttaatcagga aatttatttg tcgaatatta
    10261 gagttttcag ttactgaacg ctgaaagcca gagtgcgtat atacgatttt ggaaagtagg
    10321 gtttgtcgtt ttcggttagt acgagcttgt acataatctc gtgataaagg tgtatagctt
    10381 gataaaaacg gttctataaa tcccattttt acaaattgat taatagcttt acgaaccgag
    10441 gccaaattca tggccttgct tgttctctgc gaagccataa cggaatcttg ggcaatgttt
    10501 tgctgcaatg cttcatatag ttcgttgctg tatggctggt cttgattcgc atcaataaag
    10561 tcaagacaaa tattgagtgc agtacaaaat ttttgatcgt tataatttgt aaaggcattg
    10621 gtaaacgccc aataatcttc ataaatttgg ctgtttggct gattattact catctctgtc
    10681 tccaagaata ttcgatacca atattctgtt tttgtattta agtaatatct atcattcatg
    10741 tattttctac taaaaacaga atttccttat ggctttgctt cttttctttt cctgtaacct
    10801 tataaacgtg aggcgtttcc aagatttgta catttcgccc atttttacct aacatttctt
    10861 ctaattcatc tcggtttgga tatgaagcat tgttgtagct taacagccaa tatttaaatg
    10921 gtttcaaatg attgattacc cttttaaata attcgacagc ctgcttttta tccatgaaat
    10981 gattggcaaa tggtttgggt atggatgatg taatgtaact gtccaataat ccgtaaaagc
    11041 caaaataatt gttcatcgtg cctgtgtaag gtgggtctaa atagacggca tcagcttgta
    11101 tattaggtaa taaatcaaat atatcttgat taaaggcgtg atgccgccag ccattattga
    11161 aaacagcttg gttatagtca tccaaatttt gcagaaaatg actttgaaaa ctttcattgt
    11221 ggtaggcgcg tcgacggcca tatttagcat aactgtattc ttcatcacgc agttgtttaa
    11281 ctttttccca aggaattgtg aatcgtgaat agggcatttt acgtatcatg gcgcgacgca
    11341 ttaaagtaaa cgccaaagca cgtttatact ggttattcag cttccctata tttttacagt
    11401 acaaatcaag ttgttggcat tcatcgtgaa aatagaattt ttcggaataa cgctgactca
    11461 taaaaccggc atgcgggctg cctgaaaaaa tcattgcgac atcatcgtca tttaatgttt
    11521 catggttgtt ttctattaat gctaaagcaa tttggtaatt aattgccaaa atatcgttag
    11581 taatcacacg atagccgcgt tttttggctt cgtaggcaaa ggaacagcct ccactaaata
    11641 catctgcaac tgtatctaca tcagacggaa gctggtcaca aatccaggaa gctattttct
    11701 ctttattacc gatatagtta attttcggat atttcttatt cattttcact catttttaaa
    11761 atactttcag caatagcttt tgccaataaa ggcggcacgg cgttaccaac ctgctgctgc
    11821 tgggcaattt tgctgccgca aaaaataaaa ttatcaggga aagattgtaa ggcagctaat
    11881 tcacgaacgg ttaaagcccg attctgttca tagtgaaaaa ctttgcgcat atctcctgta
    11941 atacaaacgg ctggtttgtt gctgttgtaa cggatgtatt tacggatatc acctgttttc
    12001 ggacgtaatg gttcaggaat atcgttacgg ttacctccat ttttaacaaa tgccattttt
    12061 tctaacattt gtgccgaatg attcatagct tcatgatttg caacgtgtgg attgctttcg
    12121 ccagcagcca gttttggaaa atgtcctatt gctgatccaa cagtctgatg ggaaatctgc
    12181 aaaggttcgg gaaaggaaat tttgccttta tccctcctcc cgataaatat cactcggcta
    12241 cgtatctgag gaacaccgaa atcggctgca ctcagtatct tacattccac cgaataaccg
    12301 atattctgaa atgcttgaat aatctcaata cgtgttttac ctgaattgtg tgtatagagt
    12361 cgcgctacat tttccataac aaaaaaatat ggttggacaa ttttaactat tcggacaaac
    12421 tctttaaata aatggttgcg tgggtcatct gtaaatgtcc gtccaatctt tcctgccata
    12481 ctaaaacctt gacaaggtgg tcctccaata accaaatcaa ctgattgtcc gttaagacaa
    12541 ttggttaaat cttgttcggt tagtgtggtt aaatcttttt gcagtaattg atgacggggg
    12601 aagttggtac ggtaagtctg acaataatca gactccattt caacagaaag caattgttgg
    12661 aatccggctt gttcaaaacc caaggatagg cctcctgctc ctgagaaaag gtcaatatag
    12721 gtaagtggtg tgtgcataag tcaaaatcca taaactcttc gattatttta ccgcttcaac
    12781 ttcgcaaacg catccgccat cgccgaattg gtcggggcgc ggtcgttgcg ttggggtttg
    12841 cggccggctg tccgttcgcg gctgcggttt tcagacggca ttttatgttt tgcgccgccc
    12901 ggttcgtcat ccaagcgcat ggtcagcgcg atgcgtttgc gtgcggcatc gacttccagc
    12961 actttcactt tcaccacgtc gccggctttc accacttcgc gcgggtcttg gacgaactta
    13021 ttagacaggg cggagatgtg caccaagccg tcctgatgga cgccgatgtc cacgaacgcg
    13081 ccgaagttgg cgacgttgga gaccacgccc tcgagtatca tgccgacttg caagtcgctg
    13141 atttcgtgga tgccttcggc aaacgatgcc gtctgaaacg caccgcgcgg gtcgcggccg
    13201 ggtttttcca gctcggacag gatgtccaaa atagtcggca gaccgaagcg ttcgtcggtg
    13261 aagtcggatg ctttgatttg cttcacacgc tcgcggttgc cgatgagttc ggcggcggta
    13321 atgccttgtt gcgccagcat tttggcgacg acgggatagg cttcggggtg gacggcgctc
    13381 gcgtccagcg gctctttgcc gccgttaatc cgcaaaaagc ctgctgcttg ctcgaaggtt
    13441 ttttcgccca agcgcggtac ttttagcaat ttttttcggc tgtcgaacgc gccgttttca
    13501 tcacggtagg cgacgatgtt ttgggcaagg gtttgattca agccggaaat ccgcgccaag
    13561 agcggggcgg aggcggtgtt cgcgtccacg ccgacggcgt tcacgcagtc ttcgaccacc
    13621 gcgtccagcg atttggcgag ccggctttgg ttcacgtcgt gctgatactg ccccacgccg
    13681 atggatttgg ggtcgatttt gaccaactcg gcaagcgggt cttgcagcct gcgggcgatg
    13741 gacactgcgc cgcgcaggga aacatctaag tcgggaaact cgcgcgccgc cagttcggac
    13801 gcagaataaa tcgacgcgcc ggcttcggaa acgacgattt tgtgcaggct gctttcgggc
    13861 attccgcgca ccagttcgcc cgcgattttg tcggtttcgc ggctggcggt gccgttgccg
    13921 atggcgatga gcttcacacc gtgttgttta atcaggcgcg acaacgttgc caacatattg
    13981 ttttcttgat gcaaatagac aatgaccgta tccagcagtt tgcccgtgtc gtccaccacg
    14041 gcgcatttca cgccgttgcg gtagccgggg tcgagtccca aagtggtcag ccgcccggcg
    14101 ggcgcggcga gcagcaagtc tttgagattg cgggcgaaca cggtaatcgc gtcagtgtcg
    14161 gcagcttctt tcaaacgatt gagagcttcg agttccagcg acaaaaagat tttcgcgcgc
    14221 caagtcaggc gcacggtgtc gcgcagccat ttgtggccgt ctgaaacctt gaagcggcgg
    14281 gcgatgattt gctcgtattc gctttgctgc gtaatcggcg tgtcgtcggg ctggtatttg
    14341 agcacgatgt tcaacacgcc ttcgttgcga ccgcgcaaaa ccgccagcgc gcggtggctg
    14401 ggcatggcgc gcacgggttc gcggcggtcg aaataatcgc tgaatttttc gccttcggtt
    14461 tctttgcctt caacgacttg cgtgtggatt tcggcttcgt tccacagctt gtcgcgcagc
    14521 gtgccgatga gttccgcgtc ttcggcaaac tgctccatca gaatcgcgcg cgcgccatcc
    14581 agcgcggctt tggcgtcggg gatgttttcg ttcaggtagc cttgcgcggc ggcttccacg
    14641 tcctgcggct gttcggcaag caacacgtcc gccagcggct gcaaaccgtg ttcgcgagcg
    14701 atttgcgctt tggtgcggcg tttgggcttg taaggcagat acaggtcttc cagcgcggtt
    14761 ttgttgtcgg cggcttcgat ttgcgccctg aggtcgtctg aaagcttgcc ttgctcttca
    14821 atgcttttta acacaacggc cttgcgctct tccaactcgc gcaggtattg cagccgctcg
    14881 gcaagctggc gcagctgcgt atcgtccagc ccgcccgtgg cttctttacg gtaacgcgcg
    14941 ataaagggga cggtcgcgcc gtcgtccaaa agctcgatag cggcattgat ttgcacggta
    15001 gtggcggaga gttcttggga gaggattcgg gtaatgttca taaattgcct ccgtgatgcc
    15061 gtctgaacag ccgacggcgc aatgtgggta atcgtttgga aaagatgaag ataatactga
    15121 tatactttgc ccgatacaat ctgaaaggaa tgtttatgac cgtcctgatt accggcggca
    15181 ccggctttat cggttcgcac accgccgtct cgctcgtcca atccggttac gatgccgtga
    15241 ttttggataa tctgtgcaac tcgtctgccg ccgtcctccc gcgccttcgg caaattacct
    15301 gcagaaacat accgttttat cagggcgaca tccgcgactg tcagattttg aggcagattt
    15361 tttcagaaca tgaaatcgaa tccgtcatcc attttgccgg tttgaaggca gtgggggaaa
    15421 gcgttgccga gccgacaaaa tattacggca acaatgttta cggcagcctg gtgctggcgg
    15481 aagaaatggc gcgcgcgggc gtgttgaaaa tcgtattcag ctcgtcggca accgtttacg
    15541 gcgatgcgga aaaagtcccc tatacggaag atatgcgccc gggcgatacc gctaatcctt
    15601 acggtgcgtc caaagcgatg gtggagcgga tgttaaccga catccaaaaa gccgatccgc
    15661 gttggagcgt gattttgttg cgctatttca acccgatcgg cgcgcacgaa agcggactta
    15721 tcggcgaaca gcccaacggc gttcccaaca atcttttgcc ctatatctgt caagtggctt
    15781 cgggcaggct gccgcaactg tcggtattcg gcggcgacta tccgaccccc gacggtacgg
    15841 gaatgcgcga ctacatccat gtgatggatt tggcagaagg gcatatcgcg gcaatgaagg
    15901 cgaaaggcgg cgttgccggc gtacatttgt tcaacttggg ttcgggacgc gcctattccg
    15961 ttttggaaat catccgcgcc tttgaggccg catccggttt gcacattcct taccgaatcc
    16021 aaccccgccg cgccggcgac ttggcgtgtt cctatgccga cccgtcccat accaaacaac
    16081 aaaccggctg ggaaaccaaa cgcggcttgc agcaaatgat ggaagattcg tggcgttggg
    16141 tcagccgcaa ccccggcaga tatggggatt aaatgcaaac cgcaggcaaa aaaaacatcc
    16201 tcgttaccgg cggcgcgggt tttatcggct cggcagtcgt ccgccatatt atccaaaaca
    16261 cccgagattc cgtcgtcaac ctcgacaagt taacctacgc gggcaatctc gaatcgctga
    16321 ccgacattgc cgataatccc cgctacgctt ttgagcaagt ggatatttgc gaccgcgccg
    16381 aactcgaccg cgtgttcgcg caataccggc ccgatgccgt gatgcacttg gcggcggaaa
    16441 gccacgtcga ccgcgccatc ggttcggcag gcgaatttat ccgaaccaat atcgtcggca
    16501 cattcgacct gctggaagct gcgcgcgcct attggcagca aatgccgtct gaaaaacgcg
    16561 aagccttccg tttccaccat atttctaccg atgaagtcta tggcgatttg cacggcacag
    16621 acgatttgtt tacagaaacc acgccatacg cgccgtccag cccctactcc gcctccaaag
    16681 ccgccgccga ccaccttgtc cgcgcgtggc agcggactta caggctgccc tccattgtca
    16741 gcaactgttc caataattac ggcccccgac aattccccga aaaactcatt cctttgatga
    16801 ttctgaacgc actttccggc aaaccactgc ctgtgtacgg cgacggggcg caaatccgcg
    16861 actggctgtt tgtcgaagac cacgcgcgcg cgctgtatca ggtcgttacc gaaggtgttg
    16921 tcggcgaaac ctacaatatc ggcggacaca atgaaaaaac caatctcgaa gtgatcaaaa
    16981 ccatctgcgc cctcttggaa gaactcgccc ccgaaaaacc ggccggcgtg gcacggtatg
    17041 aagatttaat tactttcgta caagaccgcc ccggccatga tgcccgctac gccgtcgatg
    17101 cggcgaaaat caggcgggat ttgggctggc tgcctttgga aacttttgaa tccggcctcc
    17161 gcaaaaccgt gcaatggtat ttggacaaca aaacccggcg gcaaaacgca taaaacggca
    17221 actgccgttc ggaacgctta ggtacgggca aatagttttc agacggcatc ccgacgcaat
    17281 gccgtctgaa aacccatcgc aaaggaagaa agaaaagatg aaaggcatca tactggcagg
    17341 cggcagcggt acgcgcctat atccgattac gcgcggcgta tccaaacaac tgctgcccgt
    17401 gtacgacaaa ccgatgattt attacccctt gtcggttttg atgctggcgg gaatccgcga
    17461 tattttggta attaccgcac ccgaagacaa cgctgccttc caacggctac tcggcgacgg
    17521 ctccgacttc ggcatccgcc tgcaatatgc cgttcaaccc agccccgacg gcttggcgca
    17581 ggcatttatc atcggcgaag aatttatcgg caacggcaat gtctgcctga ttttgggcga
    17641 caatattttc tacggtcaat catttacgca aacattgaaa caggccgccg ccaagaccca
    17701 cggcgcaacc gtattcggtt atcgggttaa agaccccgag cgtttcggcg tggttgaatt
    17761 tgacgaaaac ttcaacgcct tatccatcga agagaaaccg caacagccca aatccgattg
    17821 ggcggtaacc ggcttgtact tccacgacaa ccgcgccgtc gagttcgcca aacagctcaa
    17881 accgtccgca cgcggcgaat tggaaatttc cgacctcaac cggatgtatc tggaagacgg
    17941 ctcgctgtcc gttcaaatat tgggacgcgg tttcgcgtgg ttggacaccg gcacgcaaga
    18001 aagcctgcac gaggcggctt ccttcgtcca aaccgtgcaa aatatccaaa acctgcacat
    18061 cgcctgcctc gaagaaatcg cctggcgcaa cggttggctg acgaaaaaag atgtggaaac
    18121 acgcgcaaaa catttggaaa aaaccgccta cgggcaatac ctgctgcacc taatcggcaa
    18181 ataaataccg tctgaacgcc ccgacggctt tcagacggca tccaaaccgt gccgcgccgg
    18241 caccttaacc gacctgccgc acggcgcgca taaaaaatca aaccgcaaaa aaacagcggt
    18301 aacgataccg ccaaaggact ttatggacat catcgacacc gccctccccg acgtaaaact
    18361 tttaaaaccg caagtcttca cagacgggcg cggttttttt atggaaacat tccgcgacgg
    18421 atggttcaaa gaaaatattg ccgatcgaac tttcgtgcag gaaaaccact ccaactccag
    18481 caagggcgta ttgcgcggcc tgcactacca aaccgaaaac acccaaggca aactcgtacg
    18541 cgtagttgtc ggcgaagtgt tcgacgtggc cgtcgatatg cgcgaaggtt cgccgacttt
    18601 cggcaaatgg gcgggcgcaa ccttgtcggc gcaaaaccga taccagcttt ggatacccga
    18661 aggcttcgca cacggttttt gcgttttggg cgacgcggcg gaagtcgtgt acaaatgcac
    18721 ggactattac aaccctgaaa ccgaacaggt tttaatatgg aacgacccgg caatcggcat
    18781 aggctggccg cttcaaaccg cgccgctgct ttcgcccaaa gaccttgccg gcaaaacgtg
    18841 ggcacaagcc gaaaagctcc gccttacgct ttcccgataa aaaatgccgt ccgaacgttt
    18901 cagacggcat tttctccgac aggctaccta cccgccttca gtacgcgctg tgcaaagaaa
    18961 aacatcccgg taacgaagaa cgccaagccc aaccaagaag cggcggcatc ccagttttgc
    19021 agattcaacg cgagcggcgc atccgagccg ccgttggtca cagagaaggc aataataaac
    19081 gccataatta caccaatcag gctttcaccg acaatcaggc ctgccgcgaa aagcgtaccg
    19141 atacggtcgg cgtttttcag acggccttcg cggttttccg ccttcttgcc aatgatgtgt
    19201 ttcaacaccg ccgccaacac cgcgcctgcc acgatgggca tattgacgga cggcggcaga
    19261 taaatgccca taccgaccgc aaggacgggc agggcaagtt taccgcctga tgattttttc
    19321 aacaccaaat cgacgacgat taataccgct ccaatcgcga taccggtaaa gatgtacgcc
    19381 cattcgaggt tgtgggcgaa aatgcccgac gcaatggtcg tcatcaaagt cgcttgaggg
    19441 gctgccaaag cctgcgccgc atccatgcct tcgcgcggca ttgcgccggt aaagccgtag
    19501 gcttcgtaaa gcagttccaa cacgggcgaa ataaccagcg caccaacgat acagccgata
    19561 atcagggcga cttgctgccg ccaaggcgta gctttgagca ggtagccggt tttcaagtct
    19621 tgcaggttgt cgttggaaat cgaagccacg cagattactg ccgatccgca aaaaagcgtc
    19681 aacgccagta agaatttgcg gttggcctca tccgccaaca aacctccgga ttcgcctacc
    19741 agcagcaaaa ccagtgaaat aacgacgatg gacacgatgc ccacgccgga aatcgggctg
    19801 gaagacgagc cgaccaaacc tgccatataa ccgcaggcgg cggcgaccaa aaagccgatg
    19861 acggaagcca aaagcgtgca aaccgccacc aaaagccacg ccatgccgcc cgtaatgtgc
    19921 gaatcgccga taaagtggta aaacgacacg cctagaataa acatcataga caacacccag
    19981 aaaatcatgg ctttaggcga caaatcctgt tcggcgcgtt ctgtagcggg cgcaccgccg
    20041 ccaaaactct tgaacgacat cttcatgcct tccaccattg gcttgagcag catcaaaagc
    20101 gtccaaaccg ccgcgatacc tatggttccc gcaccgataa aacgcacttt ttccttccac
    20161 agcttcatcg caaacgccgc catttccata tcggaaggtt gcggaatgtg tgaggagaaa
    20221 tacggcacgg caatacccca agcaatcgaa atgcccagca ggatggcgat gccgcccgtc
    20281 agtccgacca aataacccgc gcccaacaag accagtgaaa agcccatcgg cagttggaaa
    20341 attgccgtac cgcttttaaa ccaataactc gcgctatcgg caatcacacg cagacctccg
    20401 gcgcaaaagc tcatcaatcc cgccaacgcg ccgccggccg ccagctcttt gataccgctg
    20461 ccgccctgac ggtcatcccc ttcttcatga ccgcccactt tcaaaatttc agcagccgcc
    20521 acaccttccg gataaggcaa atcgcttttc accaccatca cgtaacgcag cggaatggtg
    20581 aaaatcaccc ccaaaatccc gccggcaata cataaaagcg tcgtctgcca aaacgggaaa
    20641 ccgctccagt agcccgccat cagcaaaccg ggcaggacga agatgatggt tgaaagcgta
    20701 cccgcagccg aggcttgggt ctgcaccatg ttgttttcca aaatattgct gcctttgaaa
    20761 aattttaaaa ccgccatcga aatcaccgcc gccggaatcg acgaggcaaa ggtcagcccg
    20821 actttcaaac cgaggtaaac gttagacgca gtaaaaatta cagtgatcaa tgcgccgagt
    20881 atcatgcctc ggagcgtcag ttcgcggtat ttttctaccg aaccggataa agatttattc
    20941 attattcttc ctttgacaac agacgttcac atattgttgg catcacgcca tgatgtcaag
    21001 ttttaaaaag aacagttaaa aacaattatc ccaccctgcc catacccaat tgaaaataaa
    21061 aactatttcc aaacgaacaa aaacagccgt atcagggagg ttccccgata cggctgcttg
    21121 tttccgaacc ttaaaatcaa tcaaacaaat cgcgcagctt gtctaaaaac gatttcttgc
    21181 gcggcgtttg gttttccaag cccgtagaaa tccgctcaaa ttcttccaaa agctcttttt
    21241 gacggtcggt caaattgaca ggcgtttcga caacaatatg gcagtacaaa tcgccggtcg
    21301 cgctgctgcg taaagatttg acacccttac ctttcacgcg catcctcctg ccggtttggg
    21361 tttctttggg gacggtgagc ttgactttgc cgtccaaggt cggcacttct aactccccgc
    21421 ccaaagcagc catggcaaaa ctaatcggca gttcgcaatg caaatccaaa ccatcgcgtt
    21481 ggaaaatctt atgcgcccga atgcggacgg ttacatacag gtcgccggca ggcgcgccgt
    21541 gcatacccgg cccgccttca ccgctcaaac ggatacgctg cccgtcatcg ataccggcgg
    21601 gaatattgac ttccaccgtc ttgaccgcct tattccgccc cacgccacgg catttgacgc
    21661 aaggttcttt aatatgtttg cccgcaccgc ggcaggtcgg acaagtctgc tgcatacgga
    21721 aaatcgcctg ctggatgtgc accgtacccg aacctttgca agtcgggcag gtttccgggg
    21781 atgcccccgg tttcgcgccg ctgccgttgc agacatcaca cgcttcataa gtcggaatat
    21841 tgatgcgttt cttcacacct tttgcggctt cttcaagcgt gatttcgata ccgacctgca
    21901 cgtcctcacc ctgataatca ggctgggcgc gccccgaacc acctccaaac atttggctga
    21961 aaatatcccc aaagtcaaaa ccctgcgcac cgccaaatcc gccaaaccct ccgaagcccc
    22021 cctgtccgcc gccttcaaac gccgcatgac catactggtc gtacatggca cgcttttcct
    22081 tgtcggacaa agtttcatac gccttttgta cttctttaaa cttctcttcc gcctctttat
    22141 tgtcaggatt gcggtcggga tggtatttca tcgccaattt acggtaggct tttttaatct
    22201 catcatcggt agctgctctt gccacaccca gcgtcgcata aaaatcttga ttactcattt
    22261 tttcatctaa aaataaaatc acggcttaaa atgagggcaa ttgcgcaaaa cacaagacaa
    22321 acagactgag acctttgcaa aattccccta aaatccccta aattcccacc aaggcattta
    22381 ggggatttcc catgagcacc ttcttccggc aaaccgc
//
LOCUS       DAXFZM010000022        22283 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.022, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000022 DAXFZM010000000
VERSION     DAXFZM010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 22283)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22283)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22283
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.022"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(41..211)
                     /locus_tag="ACFJAG_000755"
     CDS             complement(41..211)
                     /locus_tag="ACFJAG_000755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003744701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rubredoxin"
                     /protein_id="HFC3980107.1"
                     /translation="MAQYMCGPCGWIYDEELGDPEHGIAPGTKFEDIPDDWKCPECGV
                     GKEDFYLLDFVI"
     gene            complement(344..1426)
                     /locus_tag="ACFJAG_000756"
     CDS             complement(344..1426)
                     /locus_tag="ACFJAG_000756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HFC3980108.1"
                     /translation="MNAQTLLANVAELVKTKLKPLVDDIGRKGYYPEAFMRELGAIGA
                     VGIEAEGGNGLGLATRIAVLREIGKECGATSFSAWCQAACAWYLHQTPNQAVKDKYLA
                     DILQGKVLAGTGMSNTVKHLAGIEKHNLQAECVEGGYTVNGALPWVSNIGEDHIWANT
                     AQIGGGYVMFITGGQREGVSLQNCPEFCALEGTHTFSLNFKDVFIPDEDIIAAPEQFA
                     GYIQSIKAGFILLQIGIGAGVIDGSLGIIRLVNVVNAEVNSYLDDGYDSLKARLDGAW
                     AETERLAGLAWDNTPDNLATLKLREAAAVLALAAAQSAALHSGAKGYLMRSPAQRRVG
                     EAMFVAIVTPAIKHLCKEIAAIEAAK"
     gene            complement(1564..2112)
                     /locus_tag="ACFJAG_000757"
     CDS             complement(1564..2112)
                     /locus_tag="ACFJAG_000757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HFC3980109.1"
                     /translation="MARLTVHTLETAPEAAKPRVAAVLQNNGFIPNLIGVLANAPEAL
                     AFYQEVGKLNAANSLTAGEVEVIRIIAARTNQCGFCVAGHTKLATLKKLLSEQSLNAA
                     RALAAGEFDDAKLGALAAFTQAVMAKKGAVSDDELKAFFDAGYNRQQAVEVVMGVALA
                     TLCNYANNLAQTEINPELQAYA"
     gene            complement(2252..2623)
                     /locus_tag="ACFJAG_000758"
     CDS             complement(2252..2623)
                     /locus_tag="ACFJAG_000758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2628 domain-containing protein"
                     /protein_id="HFC3980110.1"
                     /translation="MKPYKIYTHPALPPQAVKQGWSWPGLLFGTLWACFKRMWGLGLG
                     MTGAIFVLAVFAQLVYGDTPATDSAFNVLGLAVSVWFGAKGNSLYARHLLSRGYTELP
                     ETVEAANPQAALAQYFGRGGG"
     gene            complement(2808..4499)
                     /gene="dld"
                     /locus_tag="ACFJAG_000759"
     CDS             complement(2808..4499)
                     /gene="dld"
                     /locus_tag="ACFJAG_000759"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016901 - oxidoreductase activity, acting
                     on the CH-OH group of donors, quinone or similar compound
                     as acceptor [Evidence IEA];
                     GO_process: GO:0006089 - lactate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0019516 - lactate oxidation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-lactate dehydrogenase"
                     /protein_id="HFC3980111.1"
                     /translation="MSASQLLSSLTQITGEKYIITDPAKTEQYRQGYRFGEGKALAVV
                     RPGSILEMWKILQACVEADVIVITQAANTGLTGGSTPDGNDYDRDIVIVNTMRMNIIQ
                     TINNNEQVVCLPGSTLNQLELLLKPLGREPHSVIGSSCIGASVLGGVCNNSGGALVQR
                     GPAYTEMALFAQINEEGRLELVNHLGIDLGDTPEEILTNLQGHHYQKKDIKQDAGKGH
                     DHAYCEHVRQVDEPTAARFNADPARHYEASGCAGKLMVFAVRLDTFPQEKQTAVFYIG
                     TNDINELTDIRRAALGEFESLPVSGEYIHRHAFDIADVYGKDTFYVIKKFGTHQLPKL
                     FDLKARVDRFGKKVSFLPKHFSDKAMQFVSKFLPDHLPKSMRDYRDKYEHHLILKMGG
                     KGVDEARAFLKEYFSHHGGAFFECNAEETQAAMLHRFAVASAAIRYRSVHDDEVEDLV
                     ALDIALRRDDRDWFEKLPPEIDNKIIHKLYYGHFMCHVFHQDYIIKKGNGCMALEHEM
                     LHLLEQRGAQYPAEHNVGHLYEAKPALKQFYRKLDPTNSFNPGIGKTSKKKNWAE"
     gene            complement(4674..4770)
                     /gene="ffs"
                     /locus_tag="ACFJAG_000760"
     ncRNA           complement(4674..4770)
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="ACFJAG_000760"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            5031..8864
                     /locus_tag="ACFJAG_000761"
     CDS             5031..8864
                     /locus_tag="ACFJAG_000761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3683 domain-containing protein"
                     /protein_id="HFC3980112.1"
                     /translation="MTTTTAPQRIREIPYNYTSYTDREIVIRLLGDEAWHILQDLRGQ
                     RKTGRSARMLFEVLGDIWVVVRNPYLVDDLLEHPKRRAALVREMRHRLNEIRKRRDDN
                     QQADVLIAAAEKAVERFDGSFDETRQKRRQILERLSKITKPHNIMFDGLARVTHVTDA
                     TDWRVEYPFVVVNPDTEAEVAPLVRALIELDLVIIPRGGGTGYTGGAVPLDANSAVIN
                     TEKLDKHRSVEYVELAGLYGRHPIIRCGAGVVTRRVEETAHQAGLVFAVDPTSADASC
                     VGGNVAMNAGGKKAVLWGTALDNLAYWNMVNPQGEWLRIERVRHNFGKIHDEETAVFD
                     VHTLDSDGINIVKTERLEIPGHKFRKVGLGKDVTDKFLSGLPGVQKEGTDGIITGVAF
                     VLHKMPKYTRTVCMEFFGTAATATPSIVEIRDFLLAHDSVRLAGLEHLDWRYVRAVGY
                     ATKAAGKGRPKMVLLADVVSDDEAAVEAAAEHICELARARDGEGFIAVSPEARKTFWL
                     DRSRTAAIAKHTNAFKINEDVVIPLERLGEYSDGIERINIELSIQNKLKLCAALEQYL
                     SGKLPIDKMGTDLPTAELLGERGKHALAHVAAVKARWDWLLAHLDAPLADYKSRYGTA
                     VHAAPEAKDDESCFTAFRDFRLRVSVKADVMKPLAEIFSGKTDTKIIQGLGKIHAKTV
                     RSRVFVALHMHAGDGNVHTNIPVNSDDAEMLQTAYRSVERIMKIARSLGGVISGEHGI
                     GITKLEFLTDEDLQPFWNYKNQVDPKHTFNRHKLMKGSDLRNAYTPSFELLGAESLIM
                     EKSDLGTIADSVKDCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQT
                     RRGVSVKHFEELMDIGDHCTVCHRCVKPCPVNIDFGDVTVAVRNYLADSGHKRFAPAA
                     SMGMAFLNATGPKTIKALRAAMIQTGFPAQNFAYKIGKLLPIGTKKQKAEPKATVGKA
                     PIKEQVIHFINRPLPKSVPAKTPRSLLGIEDGKSIPIIHNPAAPEDAEAVFYFPGCGS
                     ERLFSQIGLAVQAMLWHVGVQTVLPPGYMCCGYPQDAGGNKAKAEEMSTNNRVAFHRM
                     ANTLNYLDIKTVVVSCGTCYDQLEKYRFEEIFPGCRIIDIHEYLLEKGVKLDGVKGQQ
                     YLYHDPCHTPIKTMNATQMASSLMGQKVVLSDRCCGESGMFAVKRPDIATQVKFRKQE
                     EIEKNLKELPQGEPVKMLTSCPACLQGLSRYSDDNNMPADYIVIEMAKHILGENWLDE
                     FVKKANNGGVEKVLL"
     gene            8941..9942
                     /locus_tag="ACFJAG_000762"
     CDS             8941..9942
                     /locus_tag="ACFJAG_000762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase"
                     /protein_id="HFC3980113.1"
                     /translation="MIDGQTTEPKQKTRIIPAPMRGLVDDVMRDLLTRIGGYDECVSE
                     FVRITHTVHSRSIWLKYVPEIANGNKTFSGTPCTVQLLGSDADNMAANALEAVRFGAD
                     KIDLNFGCPAPTVNKHKGGAILLKEPELIFHIVKTLRGRLPAHIPLTGKMRLGYEDKS
                     PALECACAIAEGGACGLTVHARTKAEGYEPPAHWEWIRKIHDTVNIPVTANGDVFSLQ
                     DYIGIKTISGCNSVMLGRGAVIRPDLARQIKQYENGGPVKDTDFAEVSTWIGQFFELC
                     LTKEANNKYPIARLKQWLGMMKKTFDPAQTLFDRVRTVKDADEVRRILNAFEHEMDV"
     gene            complement(10003..10185)
                     /locus_tag="ACFJAG_000763"
     CDS             complement(10003..10185)
                     /locus_tag="ACFJAG_000763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980114.1"
                     /translation="MFWYVIGFCAFVVALLSLWVNAGAFGMQEDDTPQSDYEKRLGLG
                     AKLKNKNTPKAGEKRQ"
     gene            complement(10358..10489)
                     /locus_tag="ACFJAG_000764"
     CDS             complement(10358..10489)
                     /locus_tag="ACFJAG_000764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980115.1"
                     /translation="MSETAKIKLNDRPENAEKPNEKVELPIVDNDKKGGHGEGGCCG"
     gene            complement(10748..11891)
                     /locus_tag="ACFJAG_000765"
                     /pseudo
     CDS             complement(10748..11891)
                     /locus_tag="ACFJAG_000765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247001.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
     gene            complement(12216..12692)
                     /gene="greA"
                     /locus_tag="ACFJAG_000766"
     CDS             complement(12216..12692)
                     /gene="greA"
                     /locus_tag="ACFJAG_000766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0070063 - RNA polymerase binding [Evidence
                     IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HFC3980116.1"
                     /translation="MQKIPLTVRGAELLKQELQQLKSVARPEVIEAIAEARSHGDLSE
                     NAEYEAAKERQGFIEGRISELEHKLSVAHIINPAEIHAEGKIVFGTTVTLEDLETEEH
                     VTYQIVGEDEADIKQGKIYVGSPIARALIGKEEGDTAEVQAPGGVREYDIIEVRYI"
     gene            complement(12956..13084)
                     /locus_tag="ACFJAG_000767"
     CDS             complement(12956..13084)
                     /locus_tag="ACFJAG_000767"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980117.1"
                     /translation="MAKRKYKDKNSLHYTGANAVWKISGLAFSVLKYVNLVFYAEN"
     gene            13083..14384
                     /gene="aroA"
                     /locus_tag="ACFJAG_000768"
     CDS             13083..14384
                     /gene="aroA"
                     /locus_tag="ACFJAG_000768"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003866 - 3-phosphoshikimate
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HFC3980118.1"
                     /translation="MTESVRLPAASPKPSTVALPGSKSISNRTLLLAALSDNVCEIHS
                     LLKSDDTDRMLEALDKLGVQIEHLAEGRLKVHGTGGRFPNRSADLFLGNAGTAFRPLT
                     AALAVLGGDYHLHGVPRMHERPIGDLVDALRIAGADVEYLGNEHYPPLHVGEREDCGE
                     RVIPIKGNVSSQFLTALLMALPLTGQAFEIRMVGELISKPYIDITLKLMAQFGVQVAN
                     EGYRVFKIPADAHYHAPEHLHVEGDASGASYFLAAGLIAATPVRVTGIGANSIQGDVA
                     FARELEKIGADVVWGENFVEVSRPKGRAVQAFDLDANHIPDAAMTLAIVALATRQTCT
                     LRNIGSWRVKETDRIAAMANELRKLGAKVVEEAEAIHITPPETPTPDAVIDTYDDHRM
                     AMCFSLISLLGVPVVINDPKCTHKTFPTYFEVFSSLTETAE"
     gene            complement(14462..14995)
                     /locus_tag="ACFJAG_000769"
     CDS             complement(14462..14995)
                     /locus_tag="ACFJAG_000769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HFC3980119.1"
                     /translation="MFSPDKTLFLCLGALLLASCGTTSGKHRQPKPKQTVRQIQAVRI
                     SHIGRTQGSQELMLHSLGLIGTPYKWGGSSTATGFDCSGMIQFVYKNALNVKLPRTAR
                     DMAAASRKIPDSRLKAGDLVFFNTGGAHRYSHVGLYIGNGEFIHAPGSGKTIKTEKLS
                     TPFYAKNYLGAHTFFTE"
     gene            complement(15052..16578)
                     /locus_tag="ACFJAG_000770"
     CDS             complement(15052..16578)
                     /locus_tag="ACFJAG_000770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003765285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D family protein"
                     /protein_id="HFC3980120.1"
                     /translation="MKTRSLISLLCLLLCSCSSWLPPLEERTESRHFNTSKPVLLDNI
                     LQIRHTPHNNGLSDIYLLDDPHEAFAARAALIESAEHSLDLQYYIWRNDISGRLLFNL
                     MYLAAERGVRVRLLLDDNNTRGLDDLLLALDSHPNIEVRLFNPFVLRKWRALGYLTDF
                     PRLNRRMHNKSFTADNRATILGGRNIGDEYFKVGEDTVFADLDILATGSVVGEVSHDF
                     DRYWASHSAHNATRIIRSGNIGKGLQALGYNDETSRHALLRYRETVEQSPLYQKIQTG
                     RIDWQSVQTRLISDNPAKGLDRDRRKPPIAGRLQDALKQPEKSVYLVSPYFVPTKSGT
                     DALAKLVQDGIDVTVLTNSLQATDVAAVHSGYVKYRKPLLKAGIKLYELQPNHAVPAT
                     KDKGLTGSSVTSLHAKTFIVDGKRIFIGSFNLDPRSARLNTEMGVVIESPKIAEQMER
                     TLADTTPEYAYRVTLDKHNRLQWHDPATRKTYPNEPEAKLWKRIAAKILSLLPIEGLL
                     "
     gene            complement(16690..18231)
                     /locus_tag="ACFJAG_000771"
     CDS             complement(16690..18231)
                     /locus_tag="ACFJAG_000771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MDR family MFS transporter"
                     /protein_id="HFC3980121.1"
                     /translation="MIFDNNYHYNAMPIRLLVNIQDADSAGIQTASENNNGTRMGYNH
                     PMEKNTLSARAPSPWLPLLLAIAIFMQMLDATILNTALPEIAADLNESPPDMQQAVVA
                     YTLTVALLIPLSSYLADKFGTKKVFFGSIAVFMLGSALCAASGSLFELTLSRVVQGIG
                     GSMLVPIPRLTILRVYEKSKLLNAINYAVMPALIGPALGPLAGGYLVEYASWHWIFLL
                     NLPIGLLGFVLGRNIMPDVKGNDTALDFKGYLTFSVAACLLLLAAESLSHALPPYFAL
                     LPLCGGLLFARRYFRHMKTASKPIYSADLFLIRTFRLGLAGNLFSRLGISSIPFLMPL
                     MFQVAFGFGASLSGWLVAPVALSSLLVKPLIAPLMKRFGYRTVLLWNTKLLAAFIMLL
                     ALPDGNSPLWIWIFLSLAIGACNSLQFSAMNTLTLADLRPQQTGSGNSLMAVNQQLAI
                     SVGIVAGALILKNWTFLIPASSGLHFAFRMTLLSIGGITLASSLVFKRLHVSDGANLT
                     RGTRP"
     gene            18379..19158
                     /locus_tag="ACFJAG_000772"
     CDS             18379..19158
                     /locus_tag="ACFJAG_000772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HFC3980122.1"
                     /translation="MSATIPPKIIRYDSNPTDVYFFGTCVLDLFMPEAGMDAIALIEQ
                     QGIRVHFPMAQSCCGQPAYSSGHPTEAFDVAKAQLDLFPENWPIVVPSGSCGGMMKHH
                     WPTLFKNTEYESKAVDCANRIIEFTHFLLAIGYKPEDKGEPVKVAVHTSCAARREMNV
                     HLSGWQLIDGMENVERIVHDHESECCGFGGTFSVKQADISGAMVTDKVAALKETGATE
                     IISADCGCMMNIGGKIAKDEPDMPRPKHIASFLLERTGGKV"
     gene            19155..19856
                     /locus_tag="ACFJAG_000773"
     CDS             19155..19856
                     /locus_tag="ACFJAG_000773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate utilization protein C"
                     /protein_id="HFC3980123.1"
                     /translation="MSARENILAKLKKAGALPMEEPAVFDYYREKGVSWDSEAERLKH
                     WAAAMRAVKTEIYWVTKSNWMQVFREAAEGKGLKNILLPLATEHGQIARAALAGSNID
                     PIAFEREIDTWKTEFFTNIDAGFSGAQCGIARTGTLMLFSSPEEPRTLSLVPPVHFCL
                     FDTSKMYNEFHNAVEGEKLVENGMPTNVFLISGPSKTADIQLTLAYGAHGPRDLVILA
                     ILPDHISPADLEENA"
     gene            19853..21307
                     /locus_tag="ACFJAG_000774"
     CDS             19853..21307
                     /locus_tag="ACFJAG_000774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0019516 - lactate oxidation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LutB/LldF family L-lactate oxidation iron-sulfur
                     protein"
                     /protein_id="HFC3980124.1"
                     /translation="MTTQTIKFHMKPETFKQNAAISLQDKPLRKSLRTAMDMLMTKRK
                     AVLTDEEELQSLRDLCEHIRQRSLSKLPALLEQLEENLTKLGVKVHWAETPAEACQII
                     HDIITAKNGKLMVKGKSMVSEEIELNHYLEAKGIKAVESDLGEFIVQMAGEKPTHIVM
                     PAIHKTKEQVSELFHQNLGTPLTDDVDQLTGFARKALRDIYSTADVGLSGVNFAVAET
                     GTLCLVENEGNGRLSTTVPPVHIVITGIEKVVAKLSDVPPLYSLLPRSAIGQNITTYF
                     NMITGPRRSEELDGPQEMHLVLLDNGRSQAYAEDQMRRTLQCIRCGACMNHCPVYTRI
                     GGAAYGTTYPGPIGEIISPHLLGLDATRDLPTACTMCGACVEVCPVRIPITEQMQRLR
                     VEAQRSPTETVPHPIRGQGASHTFGEQMAWRTFNGIFSGSKTYRAFGWAATKFRNLTP
                     RKQLGWTQNRVPMKPAKKTLHELMAEKMRQKEQA"
     gene            complement(21456..21875)
                     /gene="fitB"
                     /locus_tag="ACFJAG_000775"
     CDS             complement(21456..21875)
                     /gene="fitB"
                     /locus_tag="ACFJAG_000775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system toxin FitB"
                     /protein_id="HFC3980125.1"
                     /translation="MILLDTNVISEPLRPQPNERVVAWLDSLILEDVYLSAITVAELR
                     LGVALLLNGKKKNVLHERLEQSILPLFAGRILPFDEPVAAIYAQIRSYAKTHGKEIAA
                     ADGYIAATAKQHSLTVATRDTGSFFAADVAVFNPWHD"
     gene            complement(21875..22111)
                     /gene="fitA"
                     /locus_tag="ACFJAG_000776"
     CDS             complement(21875..22111)
                     /gene="fitA"
                     /locus_tag="ACFJAG_000776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system antitoxin FitA"
                     /protein_id="HFC3980126.1"
                     /translation="MASVVIRNLSEATHNAIKFRARAAGRSTEAEIRLILDNIAKAQQ
                     TVRLGSMLASIGQEIGGVELEDVRGRNTDNEVSL"
BASE COUNT         5157 a         5962 c         6089 g         5075 t
ORIGIN      
        1 cggaacacgc cgagggattt tccaaggggt gcggctgccg ctatatcacg aaatccaaca
       61 ggtagaaatc ttctttgccc acgccgcatt cggggcattt ccagtcgtcg gggatgtctt
      121 caaactttgt cccgggggcg atgccgtgtt ccgggtcgcc gagttcttca tcgtaaatcc
      181 agccgcaggg gccgcacata tattgagcca tttgtgtttc cttgtttgta ccgtgctttt
      241 ttgcagcggg ccgccggggt ttggttcgga tgccgtctga agcgtgccgc cgcatctgtc
      301 ccgccttggg cggtttgtgc ttcagacggc attttccgcc tgtttatttt gcggcttcga
      361 ttgctgctat ttctttgcag aggtgtttga ttgcgggggt tacgatggcg acaaacatcg
      421 cttcgccgac gcgcctttgg gcgggactcc gcatcaggta gcctttcgcg ccggaatgca
      481 gggcggcgga ttgcgcagcg gcaagggcca gtacggcggc ggcttcgcgc agcttgaggg
      541 tggcgaggtt gtcgggcgtg ttgtcccacg ccaatccggc gagccgttcg gtttctgccc
      601 acgcgccgtc cagccttgct ttgaggctgt cgtagccgtc gtcgagatag ctgttgactt
      661 ctgcattgac gacgttgacg aggcggatga tgccgaggct gccgtcaatc acgcccgcgc
      721 cgataccgat ttgcaggagg atgaagcctg ctttgatgct ttggatgtag ccggcaaact
      781 gttcgggcgc ggcgatgatg tcttcgtcgg gaataaatac gtctttgaaa ttcaggctga
      841 aggtgtgcgt gccttcgagg gcgcaaaatt cggggcagtt ttgcaggctt acgccttccc
      901 tttgcccgcc tgtgatgaac atgacgtagc cgccgccgat ttgggcggta ttcgcccaaa
      961 tgtggtcttc gccgatgttg gacacccacg gcagcgcacc gttgactgta taaccgccct
     1021 ccacgcactc ggcttgaagg ttgtgttttt caatgccggc aaggtgtttg acggtattgg
     1081 acattccggt gcccgccaat actttgcctt gcaggatgtc ggcgaggtat ttgtctttga
     1141 cggcttggtt gggcgtttgg tgcagatacc acgcgcaagc cgcctgacac cacgcgctga
     1201 aggaggtcgc gccgcattct ttgccgattt cgcgcaagac ggcgattcgt gttgccaagc
     1261 ctaagccgtt gccgccttcg gcttctatac cgactgcgcc gattgcgccg agttcgcgca
     1321 taaatgcttc ggggtagtat cctttgcggc cgatgtcgtc gacgaggggt ttgagcttgg
     1381 ttttgacgag ttcggcaacg ttggcaagca gggtttgggc gttcatcttt gttccttaag
     1441 gtttttgggg ggaaatcggg gacacgcctg atgcgcggct gcttttcccg ccgcttgggc
     1501 ggcttgtttt tgtttgaggg ggtgtttttg aaaaaccgcc cgatattcgg gcggtttgcc
     1561 gtatcaggcg taagcctgca attcggggtt gatttcggtt tgggcgaggt tgttggcgta
     1621 gttgcacaaa gttgccaagg ctacgcccat tacgacttcg actgcctgct gccggttgta
     1681 gcccgcatcg aaaaatgctt tgagttcgtc gtcggatact gcgccttttt tcgccattac
     1741 ggcttgggta aaggcggcaa gcgcgccgag tttggcatcg tcaaattcac ctgccgccaa
     1801 agcgcgggcg gcattgaggg attgctcgga caggagtttt ttcagggttg cgagtttggt
     1861 gtgccctgcc acgcagaagc cgcattggtt ggtgcgtgcg gcaatgatcc ggatcacttc
     1921 gacttcgccg gcggtcaggc tgttggcggc gttgagcttg ccgacttctt ggtaaaacgc
     1981 caaggcttcg ggggcgtttg ccaatacgcc gataaggttg gggatgaagc cgttgttttg
     2041 aagtacggcc gctacgcgcg gtttggcggc ttcgggggcg gtttcgaggg tgtgtacggt
     2101 taaacgtgcc attttctttc cttgttcgca aatattgggg acgggcgcat ggtacgcatt
     2161 tcggaacgga ataggaaaga ctgtgccaca aacaaaaagt tataagaaat gccgcctgaa
     2221 gcctttcaga cggcattgcc gggaaacacg cctacccgcc cccgcgtccg aaatattgcg
     2281 ccaatgcggc ttgggggttg gcggcttcga ctgtttcggg caattcggta tagccgcgcg
     2341 ataaaaggtg gcgtgcataa aggctgttgc cctttgcgcc gaaccagacg gaaaccgcca
     2401 agcccaatac gttaaacgcc gagtctgtgg cgggcgtgtc gccgtaaacc agttgggcaa
     2461 acaccgccaa cacgaatatc gcgcccgtca tccccagccc caaaccccac attcttttga
     2521 aacacgccca cagcgtgccg aacaaaagac ccggccacga ccagccttgt ttgacggctt
     2581 ggggcggcag ggcgggatgg gtgtagattt tgtatggttt catcgtgttt ccttttcggt
     2641 tgaaaccccg ccctttgggg cggtaggatc agactttatt tgtgagacgc gcgcccgtgt
     2701 gccgacatac ggcttgaaca tgcccgtcgg ggaagacaga tccgacaatg ccgtctgaac
     2761 ggtgttttgc cttcagacgg cattgcctgc cttcaaagcg gacgcgctta ttccgcccag
     2821 tttttctttt tgctggtttt gccgataccc gggttgaagc tgttggtcgg gtcgagtttg
     2881 cggtaaaact gtttgagcgc gggcttggct tcatacaaat ggccgacgtt gtgttcggcg
     2941 ggatattgcg cgccgcgttg ctctaagaga tgtagcattt cgtgttccaa cgccatacag
     3001 ccgttgcctt ttttgatgat gtaatcctga tggaaaacgt ggcacataaa atgcccgtaa
     3061 tacaatttat ggatgatttt attgtcgatt tccggcggca gtttttcaaa ccagtcgcgg
     3121 tcgtcgcggc gcagggcgat atccagcgcg accaagtcct ccacttcgtc gtcgtgcacg
     3181 gaacggtagc ggatggcggc ggaagcgacg gcgaaacggt gcagcatcgc ggcttgggtt
     3241 tcttcggcgt tgcactcgaa aaacgcgccg ccgtggtgtg aaaaatattc ttttaagaac
     3301 gcgcgcgcct catccacgcc ttttccgccc attttcagaa tcaggtggtg ttcgtatttg
     3361 tcgcggtaat cgcgcatgga tttgggcagg tggtcgggca ggaatttgct gacgaactgc
     3421 attgccttgt cggaaaaatg tttgggcagg aagctgactt ttttgccgaa cctgtccacg
     3481 cgcgccttca agtcaaataa tttcggcagt tggtgcgtac cgaatttttt gatgacgtag
     3541 aacgtgtctt tgccgtacac gtcggcaatg tcgaaagcgt ggcggtggat gtattcgccg
     3601 gaaacgggca ggctttcaaa ttcgcccaag gcggcgcggc ggatgtcggt cagctcgttg
     3661 atgtcgttcg tgccgatgta gaacacggcg gtttgttttt cttgcgggaa ggtgtccaaa
     3721 cggacggcaa aaaccatcag cttgcccgcg cagcccgagg cttcgtaatg gcgggcgggg
     3781 tcggcattga aacgcgcggc ggtcggttcg tccacttggc ggacgtgttc gcaataggcg
     3841 tggtcatgtc ctttgcccgc gtcttgtttg atgtcttttt tctgataatg atgaccttgc
     3901 aggttggtca ggatttcttc gggcgtgtcg cccaagtcta tgcccaagtg gttgaccagt
     3961 tccaacctgc cctcttcgtt gatttgggcg aacaacgcca tttcggtgta ggccgggccg
     4021 cgctgtacca acgcgccgcc ggagttgttg cacacgccgc ctaaaacgga cgcgccgatg
     4081 caagaagagc cgatgaccga atgcggttct cgtcccaaag gtttcagcag cagttcaagc
     4141 tggttcaggg tcgagccggg caggcagacg acttgttcgt tgttgttgat ggtttggatg
     4201 atgttcatcc gcatggtgtt cacaatcacg atgtcgcggt cgtaatcgtt gccgtcgggg
     4261 gtcgaaccgc cggtcagtcc ggtattcgcc gcctgcgtaa tcacaatcac gtccgcttcg
     4321 acgcaggcct gcagaatttt ccacatttcc aaaatgcttc ccgggcgcac caccgccaac
     4381 gccttgcctt cgccgaaacg gtagccttgg cggtattgtt cggttttcgc ggggtcggtg
     4441 atgatgtatt tttcgcctgt gatttgggtc aggcttgaca gtaattgtga tgcgctcatg
     4501 gcagtttcct taaaattgtc ggcaggtgca tatgcacatt ggaattgttt tcacattgta
     4561 gttatacgtt atggcaaagt aaagaaaatg ccgtctgaaa gggcgttatc gtatacgctg
     4621 cggcgacata aaggaaaacg ccggaatttt cagaattccg gcgtttcaaa taaggcggcg
     4681 ggccaaaccc ccggcactgg cgcatcggag tgggctgctg gcttccgccc ctgacccggt
     4741 gttccgattt gccatgcggg gagacccgcc tcagagaaac ggcattataa cgggttttct
     4801 gaaaaactca accgttttga tacggtcata cgccggaaac accgcctaaa atttatattt
     4861 gataatattg tcaacaattt ctcaaagcgt tattttgttt ctataagggt atttcctgtt
     4921 tcggcattga aaaatatcaa aaattgaact acattatcgc cttttcaaac ccggctgaaa
     4981 ccgacttttc aaacggcatt caaataaaaa ctgccaaaca cggacacacc atgaccacga
     5041 ctaccgcccc gcagcgtatt cgggaaatcc cctacaacta tacttcctac accgaccgcg
     5101 aaatcgtcat ccgcctgctg ggcgacgagg cgtggcacat tctgcaggac ttgcgcggac
     5161 agcgcaaaac cgggcgttcg gcacggatgc tgtttgaagt gttgggcgat atttgggtgg
     5221 tcgtacgcaa tccgtatctg gtcgatgatt tgctggagca tccgaaacgc cgcgccgcgc
     5281 tggtgcggga aatgcgccac aggttgaacg aaatccgcaa acgccgcgac gataatcagc
     5341 aagcggatgt gttgattgcg gcggcggaaa aggcagtgga gcgttttgac ggcagctttg
     5401 acgaaacgcg ccaaaagcgg cggcagattt tggagcgttt gagcaaaatt accaagccgc
     5461 acaatattat gtttgacggg ctggcgcggg taacacacgt taccgatgcg accgactggc
     5521 gcgtcgaata tccgtttgtc gtcgtcaatc ccgacacgga ggcggaagtc gcgcctttgg
     5581 tgcgcgcctt aatcgagctg gatttggtca ttatcccgcg cggcggcggt acgggttata
     5641 ccggcggcgc ggtacctttg gacgcaaaca gcgcagtcat caataccgaa aaactcgaca
     5701 agcatcgcag cgtcgaatac gttgagctgg caggcttgta cggcagacat ccgattatcc
     5761 ggtgcggcgc gggcgtggtt acgcggcggg tggaagaaac cgcgcatcag gcgggcttgg
     5821 tgttcgccgt cgatccgact tccgccgacg cgtcctgcgt gggtggtaat gtggcgatga
     5881 atgcgggcgg taaaaaagcc gtattgtggg gtactgcctt ggacaacctc gcctactgga
     5941 acatggttaa ccctcaaggc gaatggctgc gtatcgaacg cgtgcgccac aatttcggca
     6001 aaatccacga cgaagaaact gccgtgttcg acgtgcacac gctggattca gacggcatca
     6061 acatcgttaa aaccgaacgc ttggaaatcc ccggacacaa attccgcaaa gtcggtttgg
     6121 gcaaagacgt taccgacaaa tttttgagcg gactgcccgg cgtgcagaaa gaaggtacgg
     6181 acggcatcat taccggcgtt gccttcgtat tgcacaaaat gccgaaatac acgcgcaccg
     6241 tgtgtatgga gtttttcggc acggccgcca ccgccacgcc ttctatcgtc gaaatccgcg
     6301 attttctgct cgcacacgac agcgtgcggc tggcgggttt ggagcatttg gactggcgtt
     6361 atgtccgcgc cgtcggctac gccaccaaag cggcgggcaa aggacgaccg aaaatggtct
     6421 tgctggcgga cgtggtttca gacgacgaag ccgccgtaga ggcagccgcc gaacacatct
     6481 gcgaacttgc ccgcgcccgt gacggcgaag gctttatcgc cgtatcgccc gaagcgcgca
     6541 aaaccttttg gctcgaccgc agccgcaccg ccgccatcgc caaacacacc aacgccttta
     6601 aaatcaacga agacgtggtg attccgctgg agcggctggg cgagtattcg gacggcatcg
     6661 aacgcatcaa catcgagctt tccatccaaa acaaactcaa actctgtgcc gctttggagc
     6721 aatatctttc gggcaaactc cccatcgaca aaatgggcac cgacctgccg accgccgaac
     6781 tgttgggcga acgcggcaaa cacgccctcg cccacgttgc cgccgtcaaa gcgcgttggg
     6841 actggctgct cgcccatttg gatgcgccgc ttgccgacta caaatcacgc tacggtacag
     6901 ccgtccacgc cgcgcccgaa gccaaagacg atgaaagctg cttcaccgcc ttccgcgatt
     6961 tccgcctgcg cgtgtctgtc aaagcagacg taatgaagcc gcttgccgaa atcttcagcg
     7021 gcaaaaccga taccaaaatt atccaaggct tgggcaaaat ccacgccaaa accgtacgca
     7081 gccgcgtctt tgtcgccctg catatgcatg ccggcgacgg taacgtccac accaatattc
     7141 cggtcaactc agacgatgcc gaaatgcttc agacggccta ccgttctgtg gaacgcatta
     7201 tgaaaatcgc ccgttcgctc ggcggcgtga tttccggcga acacggcatc ggcatcacca
     7261 agctcgaatt cctcaccgat gaagatttgc aaccgttttg gaactacaaa aaccaagtcg
     7321 accccaagca caccttcaac cgccacaaac tgatgaaagg ttcggactta cgcaacgcct
     7381 acacgccgtc tttcgagctg ttgggcgcgg aatcgctgat tatggaaaaa tcagacctcg
     7441 gcacgattgc cgattccgtc aaagactgcc tgcgctgcgg caaatgtaaa cccgtctgct
     7501 ccacccacgt tccgcgcgcc aacctgctgt acagcccgcg caacaaaatc ctcggcgtgg
     7561 gtttgctgac cgaggccttc ttatacgaag aacaaacccg gcgcggcgtt tccgtcaaac
     7621 attttgaaga actgatggac atcggcgacc actgcaccgt gtgccaccgc tgcgtcaaac
     7681 cctgccccgt caacatcgac ttcggcgacg ttaccgtagc cgtccgcaac taccttgccg
     7741 attccggcca caaacgcttt gcgcctgcgg cttcaatggg tatggcgttt ttgaacgcca
     7801 ccggtccgaa aaccatcaaa gccctgcgcg ccgcgatgat acagaccggc ttccccgcgc
     7861 agaactttgc ctacaaaatc ggcaagcttc ttccgatcgg cacgaaaaag caaaaagccg
     7921 aacccaaggc aaccgtcggc aaagccccga ttaaagaaca ggttatccat ttcatcaacc
     7981 gcccactgcc caaaagcgta cccgccaaaa caccgcgctc cttattgggc atcgaagacg
     8041 gcaaaagcat ccccatcatc cacaaccccg ccgcgcccga agatgccgaa gccgtgttct
     8101 acttccccgg ctgcggttcg gagcgtttgt tcagccaaat cggactcgcc gtccaagcca
     8161 tgctctggca cgtcggcgta caaaccgtcc tgccgcccgg ctatatgtgt tgcggctatc
     8221 cgcaagacgc tggcggcaac aaggcaaaag ccgaagaaat gagcaccaac aaccgcgtcg
     8281 ccttccaccg tatggcgaac accctcaact acctcgacat caaaaccgtc gtcgtcagtt
     8341 gcggcacttg ttacgaccag cttgaaaaat accgcttcga ggaaatcttc cccggctgcc
     8401 gcatcatcga catccacgaa tacctgctcg aaaaaggcgt gaaactcgac ggcgtgaaag
     8461 gtcagcaata cctctaccac gacccctgcc acaccccgat taaaaccatg aacgccaccc
     8521 aaatggccag cagcctgatg gggcagaaag tcgttttaag cgaccgctgc tgcggcgaat
     8581 ccggtatgtt cgccgtcaaa cgccccgaca tcgccacaca ggtcaagttc cgcaaacaag
     8641 aggaaatcga gaaaaacctc aaagagctgc cgcagggcga acccgtcaaa atgctgacct
     8701 cctgccccgc ctgcctgcaa ggactgagcc gctattccga cgacaacaat atgcctgccg
     8761 actacatcgt cattgaaatg gcgaaacaca tcctcggcga aaactggctg gatgagtttg
     8821 taaaaaaagc caacaacggc ggcgtagaga aagtgttgct ataacaacgg acacggaaat
     8881 gccgtctgaa cgccgaaagc cttcagacgg cattgtttga atcaaatacc tacccgaatc
     8941 atgattgacg gacaaacaac cgaacccaaa caaaaaacca gaatcatacc agcccccatg
     9001 cgggggctgg tagacgatgt gatgcgcgac ctgctgacac gtatcggcgg ctacgacgaa
     9061 tgcgtcagcg aatttgtacg cattacccat accgtgcatt cacgatccat atggttaaaa
     9121 tatgtccccg aaatcgccaa cggaaacaaa acgttttccg gcacgccctg caccgtccaa
     9181 cttctgggca gcgatgcgga caatatggcg gcaaacgcat tggaagccgt ccgattcggc
     9241 gcggacaaaa tcgatttgaa cttcggctgc cccgcgccca ccgtcaacaa acacaaaggc
     9301 ggcgcaattc ttctgaaaga gccggaactg atattccaca tcgtcaaaac gctgcgcgga
     9361 cgtttgcctg cacatattcc gctgacgggg aaaatgcggc taggctatga agacaaaagc
     9421 cctgctttgg aatgcgcctg tgcgattgcc gaagggggcg cgtgcggact gaccgtgcac
     9481 gcgcgcacca aagccgaggg ctacgaaccc ccggcgcatt gggaatggat aaggaaaatc
     9541 cacgataccg tcaatattcc cgttaccgcc aacggcgacg ttttcagcct gcaggactat
     9601 atcggcatca aaacaatcag cggctgcaac agcgtgatgc tcggtcgcgg tgcggtcatc
     9661 cgccccgatt tggcgcgcca aatcaagcaa tacgagaacg gcggaccggt caaagacacg
     9721 gattttgccg aagtttccac atggataggg cagtttttcg agctgtgcct gacaaaagag
     9781 gcaaacaaca aatacccgat cgcccgtctt aagcaatggc tgggcatgat gaaaaaaacg
     9841 ttcgacccgg cgcaaacgct gttcgaccgc gtccgaacgg ttaaagatgc ggatgaagtg
     9901 cgccgaatcc tgaacgcatt tgagcatgag atggatgttt gatgtctccc gcgcttcaaa
     9961 gcaaatgccg tctgaaaacc tttcagacgg catttgttat ctttattgcc gtttttcccc
    10021 tgctttcggt gtatttttgt ttttcagttt cgcccccaaa cccaaacgtt tttcataatc
    10081 cgattgcggg gtatcgtctt cctgcatacc gaacgcgccg gcattgaccc acagcgacag
    10141 cagcgcgacg acaaaggcgc aaaagccgat tacataccaa aacattgccc ctccaaattt
    10201 gttaaaatca tatcaaatac agtgccgaat ttatcacaag cgcacgagca aataaatctt
    10261 ctgaccgcag tatttcattc atttaccttg aaaacaaaaa agggcacctg aaaattttgc
    10321 gaaacttttc agatgccctg ctttgccgaa aaacgtatca gccgcagcaa ccgccttcgc
    10381 cgtgtccgcc ttttttgtcg ttatcgacaa tgggcagttc gactttttcg tttggttttt
    10441 ctgcattttc gggccggtcg ttgagtttga ttttcgcggt ttcgctcatt tccttacctc
    10501 atttggaaaa cggtttgaaa gattcattaa tatagcatgt ttaatccgaa tctgaaaagg
    10561 gaagccgtat gcgaaatccc gtctgaagcc caatcagggc ttcagacggg atttgctatc
    10621 tttattgccg cttttcttcc gtatccggat ttttgtttgg ggctgaagca gattggcagt
    10681 cagattgcaa tcgaagaatg aaggcaagcc atcaaaaaca aagctatccg cttcaccgcc
    10741 ccgatattta gaatttgtgg cgcagaccaa cggaggcggc attaatttga gtgtagttgc
    10801 cgatgccggt atttcgtttc agccaagcgg cagacatgat ggcggaagtg cgcttggaaa
    10861 aatcgtaatc gacaccggcg atgatttgat catagctggt atgttcgcgt ttctgactgc
    10921 gttcgacaaa gtcgaaacca tgggcatagc tgatgcgcgg gactgtatta ccgaagcggt
    10981 aggaagcagt ggcggcaatt tcggtcgtac tgtttttggt tttgtcggca ttttcagaca
    11041 aatccaactg agccgccaag gcgagattca agccgcttcc tcatagccgc ccgtcaggcg
    11101 gtgtacctga tggtttttca atggatcggt atcactcgct ctgccgagca agaacaaaaa
    11161 gaaagcatca tgcccctcat tggcgtgttt cgcatattta agggcataat ttccgaaaaa
    11221 gccgccattt ttgtaattca gaccggcata atacacatcc gaccccggct tgccgacaac
    11281 agccggaact ggtttcatct gattactttc cagcgtgaaa gtagcaggcg tataggcgga
    11341 cttgctgttt tgactcggaa caaattgaat gctgccgctg aaaccggaaa atccggggga
    11401 atcgtaacgc acggaaaccg gcataccgtc gtggcgtttg aaaataccca attgcgaagc
    11461 cacattatta ttgctgtccc aaggatcaat ggctttgctg gcatcgccaa acggattcgc
    11521 aacgcgaccg gcgagcgccg tgccgaattc gcctgccaag ccgataaagg attccctgtt
    11581 accccaacgg gtcgcgccgc cgccggcaac ggatacgtct tgctcgagct gccaaacagc
    11641 cttcagcccg ccgcccaaat ccccaccccc ttaaagccga taaacgagcc gaaatcactg
    11701 actttcgtcc tgatgcggct tttggcctta gtaactgtat tgcccgtttg accttctgag
    11761 ggtggctcgg tcaactgcag ccggatgttc ctgccttcca caccagcttt gacttcgccg
    11821 tacaggctga catcggcaac tgccgcaaac ggcagtgcgg acaatacgag ggcggtaagt
    11881 ttttttcgca tatcggcttc cttttgtaaa tttgctaaaa acatcgggca aacacccaat
    11941 cagtctccaa ttaccccccg aaaaaaaaac catttttcgg aacaaatttc gggtaaattt
    12001 tggaattttt attttgaaaa ataatatttc aatataaaac aataaattaa cttttttgaa
    12061 aatgttgctt tcccgcaaca tgatttaaat acagaccttg tcaaagccga tgcggcgcag
    12121 acccggatgc cgtctcgttt tttaaaacac cataaaaaaa cacacgcggt gctttaattt
    12181 cctgcgtgtg tcgagtgtat cgaaatcaag ccgaatcaaa tataccggac ttcgataata
    12241 tcgtattcgc gtacgccgcc cggtgcctga acttccgccg tatccccttc ttccttgccg
    12301 atcagggcgc gggcaatcgg agagccgaca tagattttgc cctgtttgat gtcggcttcg
    12361 tcttcgccga caatttgata ggtaacgtgt tcttccgttt ccaaatcttc cagcgtaacc
    12421 gtcgtaccga acacgatttt gccttcggcg tggatttcgg ccggattgat gatgtgggca
    12481 acggaaagtt tgtgttccaa ctcggaaatg cggccctcga taaaaccttg gcgttctttg
    12541 gcggcttcgt attcggcgtt ttcggacaaa tcgccgtgcg atctggcttc ggcaatcgct
    12601 tcgatcactt cgggacgcgc cacgcttttg agctgctgca attcctgttt cagcaattcc
    12661 gcaccgcgta cggtcagggg gattttttgc atcggtcttt ttctccatat tccggcacac
    12721 cggtttgcgg cggcaagcat accgcgtacc gtcttgtttt gtgcgtccgg atattaaaat
    12781 aaaaatacaa gccgcccgga aaatcggcgg cttgtctgtc gttgaacagc ggctattcta
    12841 ccaaattcta tgaaattggc aatcgtgccg tgccgccggc aaacgcgcta tgtccgcaac
    12901 aaaagccgaa aatatgccgg caaaaaaatt ttagaaacaa aaaatttaaa aaaaatcaat
    12961 tttcggcata aaaaaccaaa ttcacgtact ttaaaaccga aaatgccaaa cctgagattt
    13021 tccagacggc atttgcacca gtataatgca ggctgttttt atctttatat ttacgttttg
    13081 ccatgaccga atccgtccgc ctccccgccg cctcgcccaa accttccacc gtcgccctgc
    13141 ccggctccaa aagcatcagc aaccgcaccc tgctgctcgc cgccctgtcc gacaatgttt
    13201 gcgaaatcca ttccctgctc aaatccgacg ataccgaccg tatgctcgaa gcactcgata
    13261 aactcggcgt tcaaatcgaa catcttgccg aaggccgtct gaaagtacac ggcacgggcg
    13321 gacgcttccc caaccgctct gccgatttgt ttttgggcaa cgcgggcacg gcgttccgtc
    13381 cgctgaccgc cgcgctggcc gttttgggcg gcgattatca tctgcacggc gtgcctcgta
    13441 tgcacgaacg ccccatcggc gatttggtcg atgcgttgcg gattgccggc gccgatgtcg
    13501 aatatctcgg caacgaacac tatccgccgc ttcatgtcgg cgaacgtgaa gactgcggcg
    13561 agcgcgtgat tccgattaaa ggcaatgtgt ccagccagtt tctgaccgcc cttttgatgg
    13621 cgttgccgct gaccgggcag gcgtttgaaa tccgtatggt cggcgagttg atttccaagc
    13681 cctatatcga cattactttg aaactgatgg cgcaattcgg cgtacaggtt gccaatgaag
    13741 gctaccgcgt tttcaaaatc cctgccgatg cgcactatca cgcacccgaa cacttgcacg
    13801 tcgaaggcga tgcctccggc gcgtcctact tcctcgcagc cggtttgatt gccgccacgc
    13861 ccgtccgcgt taccggcatc ggcgcaaaca gcatacaggg cgatgtcgcc tttgcccgcg
    13921 aactggaaaa aatcggtgcg gacgtggttt ggggcgaaaa cttcgtcgaa gtctcgcgcc
    13981 cgaaaggacg cgccgtccaa gcctttgatt tggatgcgaa ccatatcccc gatgccgcga
    14041 tgaccctcgc catcgtcgcg cttgccacaa ggcaaacctg cacgcttcgc aacatcggtt
    14101 cgtggcgcgt taaggaaacc gaccgcatcg ccgcaatggc gaacgagttg cgcaaactcg
    14161 gtgcaaaagt cgtcgaagaa gccgaagcga ttcacattac cccgcccgaa acgccgacac
    14221 ccgatgccgt catcgacact tacgacgacc accgcatggc gatgtgtttc tcgctgattt
    14281 cgctgttggg agtacccgtc gtcatcaacg acccgaaatg cacccataaa accttcccga
    14341 cttattttga agtgttctca tcactgaccg aaacagcgga ataaggcgga aaaatgccgt
    14401 ctgaaacccg aaaacagggc ttcagacggc attttgccgc gattccggcg cggcgggcgg
    14461 ctcattctgt aaaaaacgta tgcgctccaa ggtagttttt ggcgtaaaac ggtgtggaga
    14521 gtttttcggt tttgatggtt ttgccgctgc cgggggcatg gatgaattcg ccgttgccga
    14581 tgtagagtcc gacgtgtgag tagcggtgtg cgccgccggt gttgaagaat acgaggtcgc
    14641 cggccttgag gcggctgtcg gggattttgc ggcttgccgc cgccatgtcg cgggcggtgc
    14701 gcggcagctt gacgttgagg gcgtttttgt aaacgaattg aatcatgccg ctgcagtcga
    14761 agccggttgc ggtgctgctg ccgccccatt tgtagggcgt gccgatgagt ccgaggctgt
    14821 ggagcatgag ttcctgcgag ccttgtgtgc ggccgatgtg gctgatgcgg acggcttgga
    14881 tttgccggac tgtctgtttg ggtttcggtt ggcggtgttt gccggaggtc gtgccgcatg
    14941 aggcgaggag cagtgcgccg agacagagga aaagggtttt gtcgggggaa aacatggttt
    15001 tttcctttgc gggttcggat atgccgtctg aaggtgtttc agacggcatt tctataataa
    15061 accttcgatg ggcagcaggg ataggatttt tgcggcgatg cgtttccaaa gtttggcttc
    15121 gggttcgttc gggtaggttt ttcgggtggc gggatcgtgc cattgcaggc ggttgtgttt
    15181 gtcgagggta acgcggtagg cgtattcggg tgtggtatcg gcgagggtgc gctccatctg
    15241 ttctgcgatt ttggggcttt cgatgacgac gcccatttcg gtattgagcc gtgcggaacg
    15301 ggggtcgagg ttgaatgagc cgatgaagat gcgtttgccg tccacaatga aggttttggc
    15361 atgcaggctg gttacggagc tgccggtcag gcctttgtct tttgtggcgg ggacggcatg
    15421 gttgggttgc agctcgtaga gtttgatgcc ggctttgagc agcggttttc ggtatttgac
    15481 gtagccggaa tggacggcgg caacgtcggt cgcctgtagc gagttggtca ggacggtaac
    15541 gtctatgccg tcctgcacca gttttgccag tgcgtctgtg ccggattttg tagggacgaa
    15601 atagggtgaa accagataga cgcttttttc gggctgtttg agcgcgtctt gcagcctccc
    15661 ggcaatcggc ggtttgcggc ggtcgcggtc gagtcctttt gcagggttgt cgctgatcag
    15721 gcgggtttgg acgctctgcc agtcgatgcg tcccgtctgt attttttggt agaggggcga
    15781 ctgttcgacg gtttcgcggt agcgcaggag cgcgtgtctg gatgtttcgt cgttgtatcc
    15841 gagtgcttga agacccttgc cgatgttgcc gctgcggatg atgcgcgtgg cgttgtgggc
    15901 ggaatggctt gcccagtagc ggtcgaagtc gtgcgatact tcgccgacga cgctgccggt
    15961 ggcgaggatg tccaggtcgg cgaaaacggt gtcctcaccg actttgaagt attcgtcgcc
    16021 gatattgcgt ccgccgagta tggtggcgcg gttgtcggcg gtaaaggatt tgttgtgcat
    16081 gcggcggttg aggcggggga agtcggtcag gtagccgagt gcgcgccatt tgcgtaggac
    16141 gaaggggttg aacaggcgca cttcgatatt gggatggctg tcgagggcga gcaggagatc
    16201 gtccaagccg cgcgtgttgt tgtcgtccaa cagcaggcgt acgcgcacgc cgcgttctgc
    16261 ggcaaggtac atgaggttga acagcagcct gccggaaatg tcgttgcgcc aaatgtagta
    16321 ttgcaaatcg aggctgtgtt cggcagattc gataagggcg gcgcgggcgg caaaggcttc
    16381 gtgggggtcg tcgagcaggt agatgtcgga tagcccgttg ttatgagggg tgtgccggat
    16441 ttgcaggatg ttgtccagga ggacaggttt ggaagtattg aaatgacggc tttccgtccg
    16501 ttcttccagt gggggcaacc atgaagaaca tgaacagaga aggaggcata aaagggaaat
    16561 gaggctgcgt gttttcatcg gggatatagt ttcagacggc attgcctgta ttttggggtc
    16621 tgtatgcatt gaaatgaagc atcataatct aaaggttgga atgggtaaaa gttttgtcgg
    16681 gatgcggggt taaggccgcg tgcctcttgt caggtttgca ccgtctgaaa cgtgcagacg
    16741 cttaaaaacc aacgacgagg caagggtgat gccgccgata ctgagcaggg tcatacggaa
    16801 ggcgaaatgc aggcctgaag aagccggtat cagaaatgtc cagtttttaa ggattaatgc
    16861 gccggcaaca atgcccacgc tgatggcaag ctgttggttg accgccatca ggctgttgcc
    16921 gctgccggtc tgttgcgggc gcaaatcggc gagggtcagt gtgttcatgg cagaaaactg
    16981 tagggagttg catgcgccga tcgccagcga gaggaaaatc caaatccaca gcggcgagtt
    17041 tccgtcaggc agggcgagca gcatgatgaa ggcggcaagc agcttggtgt tccaaagcag
    17101 taccgtgcgg tagccgaaac gtttcatgag cggtgcaatc agcggtttga ccagcagcga
    17161 agacagggcg acgggtgcga ccagccagcc cgacaggctt gcgccgaagc cgaaagcgac
    17221 ttgaaacatc aggggcatca gaaaaggaat cgagctgatg ccgagacggc tgaacagatt
    17281 gcccgccagt cccaaacgga aggtgcgtat cagaaacagg tcggcggaat aaatcggttt
    17341 ggacgcggtt ttcatatgtc ggaaataacg gcgtgcaaac agcagtccgc cgcacagcgg
    17401 taacagtgca aaatacggag gcagcgcgtg cgacaggctt tctgccgcaa gcagcagcag
    17461 gcaggcggca acggaaaagg tcagatagcc tttgaaatcc agagcggtat cgttgccttt
    17521 gacatcgggc atgatgttgc gtcccaatac gaaacccagc agaccgatgg gcaggttgag
    17581 caggaaaatc cagtgccacg aagcgtattc gaccagataa ccgcccgcca gaggtcccaa
    17641 cgcagggccg atcagtgcag gcatgaccgc ataattgatg gcgttgagca gcttcgattt
    17701 ttcatataca cgcaagatgg tcagacgcgg tatcggaacc agcatcgaac cgccgatccc
    17761 ctgaacgaca cgggaaagcg tcaattcaaa cagcgaaccc gatgcggcgc acaatgccga
    17821 tccgagcata aaaacggcaa tcgaaccgaa aaagactttt ttcgttccga acttgtccgc
    17881 caaataactg ctcaaaggaa tcagcagggc aaccgtcagc gtataggcaa cgactgcctg
    17941 ttgcatatcc ggaggcgatt cgttcaggtc ggcggcaatt tcgggcagtg cggtatttaa
    18001 aatggtcgca tccaacatct gcataaaaat ggcaattgcc agcagaagcg gcagccaagg
    18061 ggatggtgcg cgggcggaca gggtgttttt ttccataggg tgattgtacc ccatccttgt
    18121 gccgttattg ttttcagatg ctgtctgaat gccggcagag tcggcatcct gaatgttcac
    18181 aagcaaacga atcggcattg cattgtaatg ataattatta tcgaaaatca tcagagtaag
    18241 gtacagtaag cgttatgggg cagtttgtaa gaaaaaccgg attatttttt aaaattagac
    18301 ttgacccgca acggtcaatt acttaaagta aacgcttacc tttctacaga aaaaacgggt
    18361 ctcccgttat caaaaaatat gagcgcaacc attcccccaa aaatcatccg atacgacagc
    18421 aatccgacag atgtctattt tttcggcact tgcgtccttg atctttttat gcccgaagca
    18481 ggcatggatg ccattgccct aatcgagcag cagggcatac gcgtccattt cccgatggcg
    18541 caaagctgct gcggtcagcc tgcctattca tccggccatc cgaccgaagc cttcgatgtc
    18601 gccaaagcgc aactcgacct tttccccgaa aactggccga ttgtcgtacc gtccggctca
    18661 tgcggcggca tgatgaaaca tcactggcct accctgttta aaaatacaga atacgaatcc
    18721 aaagcggttg attgtgccaa ccgtatcatt gagtttactc atttcttgct tgccatcggc
    18781 tacaagcctg aagacaaagg cgagccagtc aaagtcgccg ttcacacttc ctgtgccgcc
    18841 cgccgagaaa tgaatgtcca tctttcaggc tggcagttga ttgacggtat ggaaaacgtc
    18901 gaacgcatcg tccacgacca cgaaagcgag tgttgcggct tcggcggcac attctccgtc
    18961 aaacaagccg atatttccgg cgcgatggta accgacaaag ttgccgcgct gaaagaaacc
    19021 ggcgcaaccg aaatcatcag cgcggactgc ggctgtatga tgaacatcgg aggcaaaatc
    19081 gccaaggacg agccggatat gccgcgtccg aagcatatcg catccttctt gttggaacgc
    19141 accggaggca aagtatgagc gcgcgcgaaa atattttggc aaaactgaaa aaagccggcg
    19201 cattgccgat ggaagagcct gcggtttttg attattaccg cgaaaagggc gtttcttggg
    19261 acagcgaagc cgagcgtctg aaacattggg ctgccgccat gcgcgcggtc aaaaccgaaa
    19321 tctattgggt gacgaaaagc aattggatgc aggttttccg cgaagcggca gaaggcaagg
    19381 gtttaaaaaa catcctgctg cccttggcaa ccgaacacgg acaaattgcc cgtgccgcat
    19441 tggcgggcag caatatcgac ccgattgcct tcgagcgcga aatcgatact tggaaaaccg
    19501 agtttttcac gaacatcgat gcaggcttca gcggcgcgca atgcggcatc gcccgcaccg
    19561 gcacgctgat gctgttttcc agccctgaag aaccgcgtac tttgagcctc gttccgcccg
    19621 tgcatttctg cctgttcgat acgtccaaga tgtacaacga gtttcacaac gccgtcgaag
    19681 gcgaaaaact ggtggaaaac ggtatgccga ccaatgtatt cctgatttcc ggcccgtcca
    19741 aaaccgcaga catccagttg acgctcgctt acggtgcgca cggtccgcgt gatttggtca
    19801 tcctcgccat tttgcccgac cacatttccc ctgccgattt ggaggaaaac gcatgactac
    19861 gcaaaccatc aagttccaca tgaagccgga aactttcaaa caaaacgccg caatttccct
    19921 tcaagacaag cccttgcgta aaagcctgcg taccgcgatg gatatgctga tgaccaagcg
    19981 caaagccgtt ttgaccgacg aagaagagtt gcaaagcctg cgcgatttgt gcgaacacat
    20041 ccgtcagcgt tccctctcca aattacccgc gctgctggag cagttggaag aaaacctgac
    20101 taagttgggc gtgaaagtac actgggcgga aacccctgcc gaagcctgcc aaattatcca
    20161 cgacatcatc acagccaaaa acggcaagct gatggtcaaa ggcaaatcca tggtcagcga
    20221 agaaatcgag ctgaaccatt atcttgaagc aaaaggcatt aaggcggtgg aaagcgactt
    20281 gggcgagttt atcgtccaaa tggcaggcga aaaaccgacc catatcgtga tgcccgcaat
    20341 ccataaaacc aaagaacagg tcagcgaact gttccaccaa aacctcggca caccgcttac
    20401 agacgacgtg gaccaactga ccggattcgc ccgcaaagcc ctgcgcgata tttacagcac
    20461 tgccgatgtc ggcttgagcg gcgtaaactt cgccgttgcc gaaacgggca cgctgtgtct
    20521 ggtcgaaaac gaaggcaacg gccgcttgag tactaccgtt ccgcccgtac atatcgtcat
    20581 tacgggtatt gaaaaagttg tcgccaagct gtctgatgtt ccgcctttgt acagtctgct
    20641 gccgcgttcc gccatcggtc agaacattac cacttatttc aatatgatta ccggtccgcg
    20701 ccgcagtgaa gaattagacg gtccgcagga aatgcacttg gttttgctcg acaacggccg
    20761 cagccaagct tatgccgaag accaaatgcg ccgcaccctg caatgtatcc gttgcggcgc
    20821 gtgtatgaac cattgcccgg tttatacacg catcggcggc gcggcatacg gcacaaccta
    20881 tcccggtccg attggcgaga ttatttcccc gcacctgttg ggtcttgatg ccacccgcga
    20941 cctgccgacc gcctgcacga tgtgcggcgc gtgcgtggaa gtttgtccgg tacgcatccc
    21001 gattaccgaa caaatgcaac gtttgcgcgt tgaagcacaa cgttcgccga ccgaaaccgt
    21061 gccgcacccc atccgagggc aaggcgcatc gcataccttc ggcgaacaaa tggcgtggcg
    21121 cacattcaac ggtattttca gcggtagcaa aacctaccgc gccttcggtt gggcagccac
    21181 caagttccgc aatctgaccc cgcgcaaaca gttgggttgg acgcaaaacc gcgtaccgat
    21241 gaaaccggcg aagaaaaccc tgcacgaact gatggcggaa aaaatgcgcc aaaaagaaca
    21301 ggcataaaaa gttgttcgca aaaataccgt ctgaaacccg aaaacagggc ttcagacggc
    21361 ctgaaaagca gcctgaacgc gcaaaaataa ataatgaaac ggaatgctaa gacgctttca
    21421 ggcagcctga cattaaggct gcttaaaagc gtcttttaat cgtgccacgg attgaacacc
    21481 gcgacatcgg ccgcaaaaaa tgagccggta tcacgcgtag caactgtcaa actgtgctgt
    21541 tttgcagtgg cggcaatata gccgtctgcg gcagcaatct ctttgccatg tgttttggca
    21601 taggaacgaa tttgcgcata gattgcggca accggttcat caaaaggcag aatccgcccc
    21661 gcaaataaag gcaaaatgga ttgttccaaa cgttcgtgca gcacattctt tttcttgcca
    21721 ttgagcaaca acgccacacc caaacgcaat tctgcaacag taatggcaga caaatacaca
    21781 tcttccaata tcaaactatc caaccatgcc accacacgtt cattgggttg tgggcgcaaa
    21841 ggttcggaaa tcacattcgt gtccagcaaa atcatcacaa agaaacctcg ttatcagtat
    21901 tacgaccgcg tacgtcttcc agctcaacac ctccgatttc ctgccctatt gatgccaaca
    21961 ttgaccccaa acgtacagtt tgttgtgctt tggcgatgtt atccaaaatt aagcggattt
    22021 ctgcttcggt actgcgccct gcggctcgcg cacggaattt gattgcgttg tgcgtggcct
    22081 cggataaatt tctaatcaca acagaagcca ttgcctttcc ttcctgaaaa aagtttttca
    22141 aatgctatca aaataaaaaa aatgatagca atctattttt taacgcctgc ggatgcctga
    22201 aaattcaggt ggccgcaggc gtttttttac atctaaaaaa acgtctcccc tccctctttc
    22261 tgataaataa aaaacagtcg ctc
//
LOCUS       DAXFZM010000023        22117 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.023, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000023 DAXFZM010000000
VERSION     DAXFZM010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 22117)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22117)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22117
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.023"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..297
                     /locus_tag="ACFJAG_000777"
     CDS             <1..297
                     /locus_tag="ACFJAG_000777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980127.1"
                     /translation="STLMSDIYYRSTIDEHFKIIELIENNPNEIYDDGGGQQFCLEFH
                     HDKVIFYHNEFDEEDGYPVLSCSLHTFKTALIAWNAFLQLPKSIHSVVETVIEE"
     gene            334..579
                     /locus_tag="ACFJAG_000778"
                     /pseudo
     CDS             334..579
                     /locus_tag="ACFJAG_000778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245501.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin type 17 domain-containing
                     protein"
     gene            576..818
                     /gene="imm31"
                     /locus_tag="ACFJAG_000779"
     CDS             576..818
                     /gene="imm31"
                     /locus_tag="ACFJAG_000779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Imm31 family immunity protein"
                     /protein_id="HFC3980128.1"
                     /translation="MTNLKLDFYSEVIIKDSCPNDLLENGETIKGKKGVVLGISEEDG
                     IIYGYTILLFDIKYCIYIDKKYIIPTGKKFSRDDFY"
     gene            896..1141
                     /locus_tag="ACFJAG_000780"
     CDS             896..1141
                     /locus_tag="ACFJAG_000780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HFC3980129.1"
                     /translation="MKDSTGQMRLATKDLAEAIKRGEVRSSAFTTKQLKAIEKGESKI
                     PDYTWHHHQDTGRMQLINEGLHHDTGHIGWRAMSKGK"
     gene            1144..1533
                     /locus_tag="ACFJAG_000781"
     CDS             1144..1533
                     /locus_tag="ACFJAG_000781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980130.1"
                     /translation="MWKIIKEDSDDLGFAIKCLFSQSIDLNEFKLWIEQVIRDMPIED
                     IPFYIFDLADFNGGIGDIDNIVGFVSSYSLSKSKKNALTGIAFLRGIDVYDPPISKEK
                     ALKALKKHPEIYHKFKRFFPFVELPLL"
     gene            complement(1573..3030)
                     /locus_tag="ACFJAG_000782"
     CDS             complement(1573..3030)
                     /locus_tag="ACFJAG_000782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015079 - potassium ion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrkH family potassium uptake protein"
                     /protein_id="HFC3980131.1"
                     /translation="MHKILPIAHVLSRLGMLFSFILLIPAALSYAFSDGAYTAFATTA
                     TVTLSGSCIVRLATLRFRRELRPRDGFTLVLMLWLAFAAMAAMPMYLYFPNMGFTDAF
                     FESMSGLTTTGATVIPHVDGLAPSVNFWRHMLNWLGGMGIIVLAVAILPMLGVGGTQL
                     FKAEIPGIDKESKMSPRISQVAKKLWFGYTLITILAAACLHFAGMGWFDAVCHALATL
                     SLGGFSTHDASIGYYNSPLIEAVIIVFTIFGGINFASHFAALNSRSLKTYWKDEECRT
                     MLLLLSGSILAAALYLWHTGHYAGFGESLRYTAFNFVSIGLANGLSNTDFAQWPLLIS
                     LWMFFLANILASSGSTGGGIKTIRALVLFKFSLREMMVLLHPKAVRTVKISGKAIPDR
                     LALTVMSFIFIYFMTVVLFSFLLMASGMEFTTAFTAVIACITNAGPGLGEVGPAGNYA
                     GLDVMQKWICVTAMLLGRLEIFTVFILFTPAYWKK"
     gene            complement(3045..3875)
                     /locus_tag="ACFJAG_000783"
     CDS             complement(3045..3875)
                     /locus_tag="ACFJAG_000783"
                     /EC_number="3.6.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008803 -
                     bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="symmetrical bis(5'-nucleosyl)-tetraphosphatase"
                     /protein_id="HFC3980132.1"
                     /translation="MAHYAIGDIQGCFDELTALLGKIGFNHGTDTLWLTGDIVNRGPK
                     SLETLQFCIRHENSVQIVLGNHDLYLLAVGCGEGALKRSDTIEPILKHPDGGKMLDWL
                     RAQPLLIREGGRVMIHAGILPQWRIAKAESLAGEAEAELRGKKYVKFFSKMYGNKPAA
                     WDEGLEGYARLRFIVNAFTRMRALTFKNELDFDYKSTVKKMPPYLRPWFKAPDRQNLD
                     HTIIFGHWSSLGYTNADNVISLDTGALWGGQLTAVNLETEEITQVQAAGGIDWKSFAK
                     "
     gene            complement(3952..4341)
                     /locus_tag="ACFJAG_000784"
     CDS             complement(3952..4341)
                     /locus_tag="ACFJAG_000784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HFC3980133.1"
                     /translation="MSKTVIHTDKAPAAIGAYSQAVRAGGTVYMSGQIPLDPATMTVV
                     GNGDFHTEARQVFQNLQAVAEAAGGSLDDIVKLNAYLTDLGNFAVFNEVMAEFITEPF
                     PARAAVGVASLPKGVQVEAEAVLVLNA"
     gene            complement(4488..5015)
                     /gene="nspA"
                     /locus_tag="ACFJAG_000785"
     CDS             complement(4488..5015)
                     /gene="nspA"
                     /locus_tag="ACFJAG_000785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein NspA"
                     /protein_id="HFC3980134.1"
                     /translation="MKKALAALIALALPAAALAEGASGFYVQADAAHAKASSSLGSAK
                     GFSPRISAGYRINDLRFAVDYTRYKNYKQAPSTDFKLYSIGASVIYDFDTQSPVKPYF
                     GARLSLNRASAHLGGSDSFSKTSAGLGVLAGVSYAVTPNVDLDAGYRYNYIGKVNNVK
                     NVRSGELSAGVRVKF"
     gene            complement(5458..6633)
                     /gene="hemW"
                     /locus_tag="ACFJAG_000786"
     CDS             complement(5458..6633)
                     /gene="hemW"
                     /locus_tag="ACFJAG_000786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051989 - coproporphyrinogen dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM family heme chaperone HemW"
                     /protein_id="HFC3980135.1"
                     /translation="MHTISFPNRTRLTALPPLSLYIHIPWCIKKCPYCDFNSHSLKNG
                     LPEAAYIDALLTDLQLELPNIWGRPVETIFFGGGTPSLFQAESIDRLLSGVRSLLRLQ
                     PEAEITLEANPGTVEIEKFQGFKDAGITRLSIGVQSFNDDMLSRLGRVHNGKEALTAI
                     DTALKLFDKVNIDLMYSLPNQTVQTALDDVQTAIATDATHISAYHLTMEPNTPFGHTP
                     PKGLPQDEAALDIEDAVHGTLEGAGFIHYETSAFAKPTMQCRHNLNYWQFGDYLGIGA
                     GAHGKISYPDRIERTVRRRHPNDYLALMQNRPGEAVERKTVAAEDLPFEFMMNALRLT
                     DGVPAAMLQERTGVPAAKIMVQIETARQKGLLETDPTVFRPTEKGRLFLNDLLQCFL"
     gene            complement(6690..9161)
                     /gene="ligA"
                     /locus_tag="ACFJAG_000787"
     CDS             complement(6690..9161)
                     /gene="ligA"
                     /locus_tag="ACFJAG_000787"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003911 - DNA ligase (NAD+) activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HFC3980136.1"
                     /translation="MNPTAQRIHELTDLLNRYAYEYYTLDAPSIPDAEYDRLFRELEA
                     LERNHPELKLPDSPTQRVGGEPLAGFAEVRHEVPMLSLTNAFSPQDENGVFDHAEMYA
                     FDQRVRDGLDGGNPEYVIEPKFDGLAISLLYRDGVLVQAATRGDGTTGEDVTRNVKTV
                     SNIPLRLHGENVPELIEVRGEVLMLKADFAGLNKRQAENGQKPFANPRNAAAGSLRQL
                     DSRITAQRKLHFFPYSVARQQGGLIAEEHIQELAYFQALGFSLPNGNFGCFKNIGEVL
                     AFYEHMQQKRPELPYEIDGTVVKVNSLAQQHELGFISRAPRWAVAHKFPAEEALTIVE
                     AIDVQIGRTGAVTPVARLQPVFVGGVTVTNATLHNQDEVSRKDVRVGDTVVVRRAGDV
                     IPEVVRVIFERRPMQETAVAVSDGIGHQQDDLFAETPSAKQTESVPLHKPYRLPARCP
                     ICRSEIEREEGEAVARCSGGMLCQAQRAQGLIHFASRKAMDIDGLGEKQIEQLVAQDL
                     VRHFADLYRIDIPTLQKMKETADKGSSENENGDAETVSGDLSKYNTQNGKKQPTKWAQ
                     NILAGIESGKTPELARFLFALGIRHVGERTAKTLAQAFGTLERVRRAPEPVLACLPDI
                     GTVVARSIAHFFAQAEQQAMIDELLAAGVAPQAQAVSLPAAQYAGPQRWITRLPGFKI
                     SENKAQALWELAGQSIEGLQNDKALPADWQAWRSKAQNTALLENLKTFFAQMPSEDEA
                     AQGSDGINKAVAGKTFVLTGTLPTFKRDQAQALIEAAGGKVSGSVSKKTDYVVAGEAA
                     GSKLEKANALGVSVLSEAELLTLLC"
     gene            complement(9295..10581)
                     /locus_tag="ACFJAG_000788"
     CDS             complement(9295..10581)
                     /locus_tag="ACFJAG_000788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0090529 - cell septum assembly [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZipA C-terminal
                     FtsZ-binding domain-containing protein"
                     /protein_id="HFC3980137.1"
                     /translation="MIYIVLFLAAVLAVVAYNMYQENQYRKKVRDQFGHSDKDALLNS
                     KTSHVRDGKPSGGPVMMPKPQPAVKKPAKPQDSAMRNLQEQDAVYIAKQKQAKASPFK
                     TEIETALEEIGIIGNSAHTVSEPQTGHSAPKPADAPAKPVPVPQTPAKPLITLKELSK
                     VELPWFDVRFDFISYIALTEAKELHALPRLSNRCRYQIVGCTMDDHFQIAEPIPGIRY
                     QAFIVGIQAVSRNGLASQEELSAFNRQADAFAQSMGGQTLHTDLAAFIEVASALDAFC
                     ARVDQTIAIHLVSPTSISGVELRSAVTGVGFVLEDDGAFHYTDTSGSTMFSICSLNNE
                     PFTNALLDNQSYKGFSMLLDIPHSPAGEKTFDDLFMDLAVRLSGQLNLNLVNDKMEEV
                     STQWLKDVRTYVLARQSEMLKVGIEPGGKTALRLFS"
     gene            complement(10775..11347)
                     /gene="ampD"
                     /locus_tag="ACFJAG_000789"
     CDS             complement(10775..11347)
                     /gene="ampD"
                     /locus_tag="ACFJAG_000789"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,6-anhydro-N-acetylmuramyl-L-alanine amidase
                     AmpD"
                     /protein_id="HFC3980138.1"
                     /translation="MDNHAGAHWQNGWLQSIRHTPSPNFSPRETGETVSLIVLHNISL
                     PPFEYGTDAVEKLFANRLDPDGHPFFSLIHTLHVSSHFLIARDGETVQFVSCGDMAYH
                     AGASSFRGREKCNAFSIGIELEGCDFEPFAEAQYRSLETLLAALCRRYPITAVTGHQD
                     IAPGRKTDPGHFFDWRRIREKGFPVDRNAV"
     gene            11431..12426
                     /gene="mltG"
                     /locus_tag="ACFJAG_000790"
     CDS             11431..12426
                     /gene="mltG"
                     /locus_tag="ACFJAG_000790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008932 - lytic endotransglycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HFC3980139.1"
                     /translation="MLKKMLKWTAVFLTVSAAVFAALLFVPKDNGRAYRIKIAKNQGI
                     SSVGRKLAEDRIVFSRHVLTAAAYVLGVHNRLHTGTYRLPSEVSAWDILQKMRGGRPD
                     SVTVQIIEGSRFSHMRKVIDATPDIGHDTKGWSNEKLMAEVAPDAFSGNPEGQFFPDS
                     YEIDAGGSDLQIYQTAYKAMQRRLNEAWAGRQDGLPYKNPYEMLIMASLIEKETGHEA
                     DRDHVASVFVNRLKIGMRLQTDPSVIYGMGAAYKGKIRKADLRRDTPYNTYTRGGLPP
                     TPIALPGKAALDAAAHPSGEKYLYFVSKMDGTGLSQFSHDLTEHNAAVRKYILKK"
     gene            12486..13106
                     /gene="tmk"
                     /locus_tag="ACFJAG_000791"
     CDS             12486..13106
                     /gene="tmk"
                     /locus_tag="ACFJAG_000791"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004798 - thymidylate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006233 - dTDP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HFC3980140.1"
                     /translation="MKPQFITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTP
                     VGEALREILLNPETKAGLRAETLMMFAARMQHIEEVILPALSDGIHVVSDRFTDATFA
                     YQGGGRGMPSEDIEILEHWVQGGLRPDLTLLLDVPLEVSMARIGQAREKDRFEQEQAD
                     FFMRVRGVYLDRAAACPERYAVIDSNRSLDEVRNSIEKVLDGHFGC"
     gene            13328..14608
                     /locus_tag="ACFJAG_000792"
     CDS             13328..14608
                     /locus_tag="ACFJAG_000792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malic enzyme"
                     /protein_id="HFC3980141.1"
                     /translation="MENSLKEAALKFHELPVPGKISVTPTKSLATDKDLALAYSPGVA
                     APCMEIHADPQNAYKYTGKGNLVAVISNGTAVLGLGDIGALAGKPVMEGKGVLFKKFA
                     GVDVFDIEIDEKDPQKLVDIIAALEPTFGGINLEDIKAPECFYIERELRKRCKIPVFH
                     DDQHGTAIITAAAVLNALRYTGRKIEEATLVCSGAGAAAIACLNQLLDLGLKRENVTV
                     CDSKGVIYQTREDKDRMDESKKFYAVEDNGRRVLADAVKGKDIFLGLSGANLLTPEML
                     NTMNEKPIVFAMANPNPEILPPLAKETRPDVVIGTGRSDFPNQVNNVLCFPFIFRGAL
                     DVGATTINEEMKRACVYALADLAMEEVTEEVVAAYGKKFEFGAEYLIPTPFDSRLLPR
                     VATAAAKAAMESGVATRPIADLEAYAAKLGEWKL"
     gene            15010..16041
                     /gene="lpxK"
                     /locus_tag="ACFJAG_000793"
     CDS             15010..16041
                     /gene="lpxK"
                     /locus_tag="ACFJAG_000793"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_025462052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009029 - tetraacyldisaccharide 4'-kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HFC3980142.1"
                     /translation="MPNFFKFHTVIERHWQKPYPVLSFLLKPLSGLFAKIAAKWRADF
                     LSGKRQSEKLSVPVVVVGNIHAGGTGKTPIAAALVSGLQEKGVKVGIISRGYGRKSKA
                     VYVLNAASRAEDAGDEPLLLFRKTGAPTAVGSSRVEAGRALLAAHPELELIVADDGLQ
                     HYALQRDVEIAVFPAADTGRTDLDLLPNGNLREPLSRLESVDAVVVGGRAADGFMPSE
                     HLFGSRIEAGAVYRLNRPSEKLDISTLSGKRVAAVAGIARPQRFFDTLTHMGIRLDQT
                     VALPDHADIFNRDLPPADVVLVTEKDAVKFSDGICTDNVWVLPVCAIIEPDLAEFVLE
                     RLEGVPKAV"
     gene            16247..16780
                     /locus_tag="ACFJAG_000794"
     CDS             16247..16780
                     /locus_tag="ACFJAG_000794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2059 domain-containing protein"
                     /protein_id="HFC3980143.1"
                     /translation="MKLKTLLLPFAALALCANAFAAPPGDASLARWLDTQNFDRDIEK
                     NMIEGFNAGFKPYADKALAEMPEAKKDQAAEAFNRYRENVLKDLITPEVKQAVRNTLL
                     KNAREIYTQEEIDGMIAFYGSPVGQSVVAKNPRLIKKSMSEIAVSWTALSGKIARHHL
                     PEFTEELRRIICGGIVD"
     gene            16765..16872
                     /locus_tag="ACFJAG_000795"
                     /pseudo
     CDS             16765..16872
                     /locus_tag="ACFJAG_000795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            17002..17184
                     /locus_tag="ACFJAG_000796"
     CDS             17002..17184
                     /locus_tag="ACFJAG_000796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trm112 family protein"
                     /protein_id="HFC3980144.1"
                     /translation="MEKKFLDILVCPVTKGRLEYHQDKQELWSRQAKLAYPIKDGIPY
                     MLENEARALSEEELKA"
     gene            17181..17942
                     /gene="kdsB"
                     /locus_tag="ACFJAG_000797"
     CDS             17181..17942
                     /gene="kdsB"
                     /locus_tag="ACFJAG_000797"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008690 - 3-deoxy-manno-octulosonate
                     cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HFC3980145.1"
                     /translation="MTEFVVLIPARLDSSRLPGKALADIHGKPMVVRVAEQAAKSKAA
                     RVVVATDHPDIQTACQAHGIEVVMTSNRHESGTTRLAEAAAALKLPPHLIVVNVQGDE
                     PLIAPELIDRTAEVLVENNVQMATAGHELHDFDELMNPNAVKVVLDKNGNAIYFSRAP
                     IPYPRDAMRAGKREMPSETAVLRHIGIYAYRAGFLQRYAEMSVSPLETIESLEQLRVL
                     WHGYPIAVETAKEAPAAGVDTQEDLDRVRAVFQTV"
     gene            17965..18480
                     /locus_tag="ACFJAG_000798"
                     /pseudo
     CDS             17965..18480
                     /locus_tag="ACFJAG_000798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237659.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
     gene            18637..18729
                     /locus_tag="ACFJAG_000799"
     tRNA            18637..18729
                     /locus_tag="ACFJAG_000799"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:18671..18673,aa:Ser,seq:gct)
     gene            19002..19787
                     /gene="trpA"
                     /locus_tag="ACFJAG_000800"
     CDS             19002..19787
                     /gene="trpA"
                     /locus_tag="ACFJAG_000800"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HFC3980146.1"
                     /translation="MSRIRQAFAALDGGKALIPYIAVGDPDIRTTLALMHGMVASGAD
                     ILELGVPFSDPMADGPVIQRAAERALANGISLRDVLDVVRKFRETDTQTPVVLMGYLN
                     PIHKMGYREFAQEAAKAGVDGVLTVDSPIETIDSLYRELKDNEVDCIFLIAPTTTEDR
                     IKTIAELAGGFVYYVSLKGVTGAASLDTDEVSRKIEYLRQYIDIPIGVGFGISNAESA
                     RKIGRVADAIIVGSRIVKEIENNAGNEAAAVGALVKELKDAVR"
     gene            19824..20696
                     /gene="accD"
                     /locus_tag="ACFJAG_000801"
     CDS             19824..20696
                     /gene="accD"
                     /locus_tag="ACFJAG_000801"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase, carboxyltransferase
                     subunit beta"
                     /protein_id="HFC3980147.1"
                     /translation="MSWLDKILPPKIKNRGKDGSSNVPEGLWRKCPSCSATVYSTELQ
                     QNNQVCPKCNHHNPLSARQRLNLLLDEEGREEVAGNVKPTDPLKFKDSKKYPDRLSAA
                     RKLTGEDDALVVMKGMMNGLPVVVAAFEFRFIGGSMGSVVGERFVQGVRRAVADNCPF
                     VCVAASGGARMQEGVNSLMQMTKTSAALHLLTEKRLPFISVLTDPTMGGVSASFAFLG
                     DVVLAEPNALIGFAGPRVIEQTVRETLPEGFQRAEFLLEKGAIDQIVDRRDMKRRISD
                     LITLLCRQDKVSAT"
     gene            complement(20756..21367)
                     /locus_tag="ACFJAG_000802"
     CDS             complement(20756..21367)
                     /locus_tag="ACFJAG_000802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CNP1-like family protein"
                     /protein_id="HFC3980148.1"
                     /translation="MRRAILLILTLTVGTSLAAGFSQKDTPINTRYRETPEEAAAREF
                     KEHTAELPPLPDAHSDGWFDIYVDENYGKQPKILLDSLQIMPAPDGSIRYILNIRSDK
                     GYDNLTAEGIFCARSSIGFGNGKLSSYKVFGYGDTVNSRWIQPRNAEWKPIGGTLGRN
                     DALRAVLYQAFCEGGVPADTQGLVQRLKERAGRYAPSMKPHDK"
     gene            21475..21699
                     /locus_tag="ACFJAG_000803"
     CDS             21475..21699
                     /locus_tag="ACFJAG_000803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HFC3980149.1"
                     /translation="MNSETLDVTGLKCPLPILRAKKALAQMRQGEVLTVLATDGGAPG
                     DFEAFCRQTGHVLLDSSEQDGVFTLVVKHK"
     gene            21730..22113
                     /locus_tag="ACFJAG_000804"
                     /pseudo
     CDS             21730..22113
                     /locus_tag="ACFJAG_000804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247800.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT         4939 a         5303 c         6622 g         5253 t
ORIGIN      
        1 tctaccttaa tgagcgatat ttactatcga tccacgattg atgagcattt caagattata
       61 gaattaatag aaaataatcc aaatgaaatt tatgatgatg gcggtggtca acaattttgc
      121 ctagaatttc atcatgataa ggtcattttt tatcacaatg aatttgatga agaagatggt
      181 tatccagtat taagctgttc gctgcatact tttaaaactg ctttaattgc ttggaatgct
      241 tttttgcaat tgcctaaaag tattcattcg gtggtggaga ctgtgattga ggaataagca
      301 taattagctt aatgaataga atcagcgata tagaaaggta gaatcagata tatcccacct
      361 aaaaattact ctccttcagc accgctacca aaaggaccta ataatggata tttggataaa
      421 tttggtaatg aatggactaa aggtccatca agaactaaag gtcaagaatt tgaatgggat
      481 gttcaattgt ctaaaacagg aagagagcaa cttggatggg ctagtaggga tggtaagcat
      541 ttaaatatat caattgatgg aaagattaca cacaaatgac taatttaaaa ttagatttct
      601 actctgaagt tattataaaa gattcttgcc ctaatgattt gttagaaaat ggtgagacta
      661 ttaaaggaaa aaaaggagtg gtattaggta taagcgaaga agatggtata atctatggct
      721 atactatttt actttttgat ataaaatatt gtatatatat agataagaaa tatattatac
      781 cgactggaaa aaaattctct cgcgatgatt tttattagct aatttaagta atttaagcaa
      841 gttttttaga tactgaaact ggtaattatg tttatgtaag cataaggagt tcagattgaa
      901 ggattctaca gggcaaatga ggctggcaac caaggatttg gcggaagcca ttaaacgagg
      961 agaagtacgt agttctgctt ttacaacaaa gcaactaaag gcaatcgaaa aaggagaatc
     1021 taaaataccg gattacactt ggcatcatca tcaagacact ggaaggatgc aattgattaa
     1081 tgaaggcttg catcatgata ccggccatat cggttggaga gcgatgagta aaggaaagta
     1141 actatgtgga aaatcataaa agaggatagt gatgatttag gatttgcaat taaatgctta
     1201 ttctctcaat ctattgattt aaatgaattc aagttatgga ttgaacaagt aatacgcgat
     1261 atgcccatcg aggacatccc tttttatatt tttgacttgg cggatttcaa tgggggaatt
     1321 ggagacattg acaatattgt aggttttgtt tcgagttaca gcctatcaaa atcgaaaaaa
     1381 aatgccttga caggcattgc cttcttaagg gggatagatg tctatgatcc gcctatttca
     1441 aaagaaaaag cattaaaagc cttaaaaaaa catcctgaaa tttatcataa atttaaacgg
     1501 ttctttcctt ttgtagagct tccgcttctt taaaggacaa tatgccgtct gaaaagtttt
     1561 cagacggcat ttttatttct tccagtaggc gggggtgaag aggatgaaga cggtgaagat
     1621 ttccagcctg cccaagagca ttgcggtaac gcagatccat ttctgcatca cgtccaaacc
     1681 ggcgtaattg ccggcgggcc cgacttcgcc cagtccgggg ccggcgttgg taatgcaggc
     1741 gatgacggcg gtaaaggcgg tggtaaattc cataccgctc gccatcagca ggaagctgaa
     1801 gaggacgacg gtcataaagt agatgaagat gaaggacata acggtcagcg cgaggcggtc
     1861 gggtatggct ttgccgctga ttttgacggt gcggacggct ttggggtgca gcagcaccat
     1921 catttcgcgc aggctgaatt tgaacaggac gagggcgcgt atggttttga tgccgccgcc
     1981 ggtcgagccg gagctggcga ggatgttggc gaggaaaaac atccacaggg aaatcaggag
     2041 cggccattgt gcgaagtcgg tgttggacag cccgtttgcc aatccgatgg agacgaagtt
     2101 gaaggcggtg tagcgcaggg attcgccgaa gccggcgtaa tggccggtgt gccacaggta
     2161 cagggcggcg gcaaggatgc tgccggagag cagcagcagc atcgtccggc attcttcgtc
     2221 tttccaatag gttttgaggc tgcggctgtt gagggcggcg aaatggctgg caaaattgat
     2281 gccgccgaaa atagtgaaaa cgatgatgac tgcttcgatg aggggggagt tgtaataacc
     2341 gatgctggca tcgtgggtgg aaaacccgcc cagcgagagg gttgccagcg cgtgacagac
     2401 ggcatcgaac caacccatcc cggcaaaatg caggcaggct gccgcgagga tggtgatcag
     2461 ggtgtagccg aaccagagtt ttttcgccac ttgggaaatg cgcggcgaca ttttgctttc
     2521 tttgtcaatg ccggggattt cggctttgaa taactgcgtg ccgcctacgc cgagcatagg
     2581 caggatggcg acggcaagga cgatgatgcc catcccgccc agccagttga gcatatgccg
     2641 ccaaaagttg acggaggggg cgagcccgtc gacgtggggg atgacggtcg cgccggtggt
     2701 ggtcagtccc gacatcgatt caaaaaatgc gtcggtaaag cccatattcg ggaaatacag
     2761 gtacatcggc atcgcagcca tagcggcaaa cgccagccac aacatcagga cgagggtgaa
     2821 gccgtcgcgc gggcgcagtt cgcgcctgaa ccggagggtg gcgagccgga cgatgcacga
     2881 gccggaaagg gtaacggtcg cggtggtggc gaaggcggtg tacgcaccgt ccgaaaaggc
     2941 gtaggagagg gcggcgggta tcagcaggat aaaggaaaac agcataccca gtcgggagag
     3001 gacgtgggcg atgggcagga ttttgtgcat agtggggcgg tccgttattt tgcgaagctt
     3061 ttccagtcta tgccgccggc ggcttggact tgggtaattt cttccgtttc gaggttgacg
     3121 gcggtcagct gcccgcccca cagcgcgccg gtgtccagcg agatgacgtt gtcggcattc
     3181 gtgtagccca gcgaggacca gtgtccgaag atgatggtat ggtcgaggtt ttgccgatcg
     3241 ggggctttga accacgggcg caggtaaggc ggcatttttt tcactgtgga tttgtagtcg
     3301 aaatccagtt cgtttttaaa ggtcagggcg cgcatccgcg tgaaggcgtt gacgatgaag
     3361 cgcaggcggg catagccttc caaaccttcg tcccatgcgg ccggtttgtt gccgtacatt
     3421 ttggagaaga atttgacgta ttttttgccg cgcagttcgg cttcggcttc tccggcgagc
     3481 gattcggctt tggctatgcg ccattgcggc aggatgccgg cgtgtatcat cacgcggccg
     3541 ccctcgcgta tcaaaagcgg ttgcgcgcgc agccagtcga gcatttttcc gccgtcgggg
     3601 tgtttgagta tgggttcgat tgtgtcgctg cgtttgagcg cgccttcgcc gcagccgacg
     3661 gcgagcaggt acaggtcgtg gttgccgagg acgatttgca cgctgttttc gtgccggatg
     3721 cagaattgca gcgtttcgag ggatttcggg ccgcggttga cgatgtcgcc cgtcagccag
     3781 agggtgtccg tgccgtggtt gaagccgatt ttgccgagca gcgcggtcag ttcgtcgaaa
     3841 cagccttgga tgtcgccgat tgcgtaatgt gccattgcgg gtgttgtgaa gtgggaaagt
     3901 gttgcggttc ggacggcacg gttggaaatc ttatgccgtc cgaacgtgga attatgcgtt
     3961 caaaacgagg acggcttccg cttcgacctg cacgcctttg ggcagcgagg caacgccgac
     4021 ggcggcgcgg gcggggaacg gctcggtgat aaattccgcc atcacttcgt tgaagacggc
     4081 aaaattgccc aagtcggtca ggtaggcgtt gagtttgacg atgtcgtcca gcgaaccgcc
     4141 tgccgcttcg gcgacggcct gcaggttttg gaacacttgg cgcgcttcgg tgtggaaatc
     4201 gccgttgccg accacagtca tcgtggcggg atcgagcgga atctgaccgc tcatgtaaac
     4261 ggtgccgccg gcgcgcacgg cctggctgta tgcgccgatg gcggcggggg ctttgtcggt
     4321 atggatgacg gttttggaca tttcggattc ctcaaaaaat agggcggcag aagccgcagc
     4381 gttcgggatt atcgtacaaa accgccggct tgtgtagttt taggcggtat atgtgccgga
     4441 aacaaaaaac cgccgaaggc tcggcggttt gcggaataac gcgtatatca gaatttgacg
     4501 cgcacgccgg cggacagttc gccggaacgg acgtttttga cattgttgac tttgccgatg
     4561 tagttgtagc ggtagccggc atccagatcg acattgggtg taacggcata gcttacgccc
     4621 gccaatacgc cgaggccggc ggaggttttg ctgaagctgt cgctgccgcc caagtgggcg
     4681 gaagcgcggt tgaggctcaa gcgcgcgccg aaatacggtt tgacgggcga ttgggtgtcg
     4741 aagtcgtaaa tgacggacgc gccgatgctg taaagtttga aatcggtgga tggggcttgt
     4801 ttatagtttt tgtagcgcgt gtaatcgacg gcgaagcgga ggtcgttgat gcggtagcct
     4861 gcggagatgc gcgggctgaa gcctttggca gaacctaaag agcttgaggc tttggcgtgt
     4921 gcggcatcgg cttggacgta aaagccggat gcgccttccg ccagtgcggc ggccgggagt
     4981 gcgagggcaa tcagtgcggc aagtgctttt ttcatatttt ggttccttta tggtcaggga
     5041 gaaaaattgt taataatccg ttaaagaatc ctgccgtatt atactgaaat tttctttttg
     5101 catcgtaata ttttcaatgc ctcaagatac gcggcggcat ccggctgctt tgccgacggc
     5161 aaagccgtta acccgcgcgt tgcccttaaa cggcggcatc acgcggcgga tgggtgaaac
     5221 ttgcaaacgg tttggaaaaa accgcaaagg cggggcggcg gcatttgtca gattgttgca
     5281 ggcgcaggcg tacggttttt tgtgtgcggg gttaccttag gcgtcggaca tttccggcgg
     5341 cggctgtgcc gtctgaaacg cccggcgggg gatgcggctg cgtttcccat cgataggcat
     5401 atttgccggc cgcgttcggg gcgggtttta cccgggcggc cgccgatttg tttgcgctta
     5461 taaaaaacac tgcaacaaat cgtttaaaaa caagcgtcct ttttcggtcg ggcggaatac
     5521 ggtcgggtcg gtttccagca ggcctttttg ccttgccgtt tcgatttgca ccatgatttt
     5581 ggcggcgggt acgcccgtgc gctcctgcaa catcgcggcg ggtacgccgt cggtcaggcg
     5641 cagggcgttc atcatgaatt cgaacggcaa atcttcggcg gcgacggttt tgcgttcgac
     5701 ggcttcgccc ggccggtttt gcattaaggc gaggtagtcg ttggggtggc ggcggcggac
     5761 ggtgcgctcg atgcggtcgg gataggagat tttgccgtgc gcgcccgcgc ctatgcccaa
     5821 ataatcgccg aactgccagt agttcaaatt gtggcggcac tgcatggtgg gtttcgcaaa
     5881 agccgatgtt tcgtagtgga taaaacccgc gccttccagt gtgccgtgta ccgcgtcttc
     5941 gatgtcgagc gccgcttcgt cttgcggcaa acctttcggc ggcgtatgac cgaacggcgt
     6001 gttcggctcc atcgtcagat gatatgcgct gatgtgggtt gcgtctgtgg cgatggcggt
     6061 ttgcacgtcg tccaatgccg tctgaacggt ttggttcggc agggagtaca tcaagtcgat
     6121 attgacttta tcaaataatt ttaaggcggt atcgatagcg gttaaggctt ccttgccgtt
     6181 gtggacgcgc cccagccttg agagcatatc gtcgttgaag ctttgtacac caatagaaag
     6241 ccgcgtgatg cctgcgtctt taaatccttg aaacttctcg atttcaactg tacccggatt
     6301 ggcttccaac gtaatttccg cttcgggctg caagcgcaac agcgaacgca cgccgcttaa
     6361 caaacggtca atcgattccg cctgaaacag gctgggcgta ccgccgccga aaaatatcgt
     6421 ttccaccggc ctgccccaaa tattgggcaa ttcaagctgc aagtcggtca gcagcgcgtc
     6481 gatataggcg gcttcgggca atccgttttt caggctgtgg gaattgaagt cgcaatacgg
     6541 gcattttttg atgcaccacg ggatgtggat atagagcgac aggggcggca gggcggtgag
     6601 tcgggtgcgg tttggaaagg aaatggtgtg catggtgcgg ttcggaaaag tggacgatgc
     6661 cgtctgaagg cggttcggac ggcatgggtt cagcagagca gggtaagcag ttcggcttcg
     6721 ctgaggacgg aaacgcccaa ggcattggct ttttccagct tgctgcccgc ggcttctccg
     6781 gcgacgacgt agtcggtttt tttggacacg ctgccggaca ctttgccgcc tgcggcttcg
     6841 attagggctt gggcttggtc gcgtttgaag gtgggcaggg tgccggttaa cacaaaggtt
     6901 ttgcctgcca cggctttatt gatgccgtct gaaccttgcg ccgcctcgtc ttcagacggc
     6961 atttgcgcga agaaggtttt taggttttcg agcagggcgg tgttttgcgc tttgctgcgc
     7021 cacgcctgcc agtcggcagg gagggctttg tcgttttgca gtccttctat actttgtccg
     7081 gcgagttccc ataaggcttg ggctttgttt tcgctgattt tgaaaccggg caggcgggta
     7141 atccagcgtt gcggcccggc atattgtgcg gcaggcaggc tgacggcttg ggcttgcggg
     7201 gcaacgcctg cggcgagcag ctcgtctatc atcgcctgct gttcggcttg ggcgaagaag
     7261 tgggcaatgg aacgcgccac taccgtgccg atgtcgggca ggcaggcgag gacgggttcg
     7321 ggggcgcggc ggacgcgttc caatgtgccg aatgcctgcg ccagcgtttt ggcggtgcgt
     7381 tcgccgacgt ggcggatgcc gagcgcgaac aggaagcggg caagttcggg cgttttgccg
     7441 gattctatgc ctgcgaggat gttttgcgcc cacttggtcg gttgtttttt gccgttttgg
     7501 gtattgtatt tagacaggtc gcctgaaacc gtttctgcgt cgccgttttc gttttcagat
     7561 gaccctttat ccgccgtttc cttcattttt tgcagggtcg gaatatcgat gcggtagagg
     7621 tcggcgaaat ggcggacgag gtcttgggcg accagctgtt cgatttgttt ttcacccaag
     7681 ccgtcgatgt ccatcgcttt gcgcgaggcg aagtggatta agccttgcgc gcgttgtgcc
     7741 tgacaaagca taccgccgct gcatcgggcg acggcttcgc cttcttcgcg ttcgatttcg
     7801 ctgcggcaga tggggcagcg ggccggcagg cggtagggct tatggagcgg aacggattcg
     7861 gtttgcttgg cggacggtgt ttcggcaaac aggtcgtcct gctgatgccc gatgccgtct
     7921 gaaacggcaa cggcggtttc ctgcatcggg cggcgttcga aaatcacgcg cacgacttcg
     7981 ggaatcacgt ctccggcgcg gcgcacgacg acggtatcgc cgacgcgcac gtctttgcgc
     8041 gatacttcgt cctgattgtg cagggtggcg ttggtaacgg ttacgccgcc gacgaatacg
     8101 ggttgcaggc gggcaaccgg cgttaccgcg cccgtcctgc cgatttgcac gtcaatcgct
     8161 tcgacaatgg tcagggcttc ttcggcaggg aatttgtggg caaccgccca gcgcggcgcg
     8221 cgggagatga agccgagttc gtgctgttgc gccaagctgt tgactttgac gaccgtgccg
     8281 tcgatttcgt agggcagttc ggggcgtttt tgctgcatgt gttcgtaaaa cgccaatact
     8341 tcgccgatat ttttgaaaca gccgaaattg ccattgggca gactgaagcc gagtgcttgg
     8401 aaataggcga gttcttggat gtgttcttcc gcaatcaaac cgccttgctg gcgggcgacg
     8461 gagtagggga aaaagtgcag tttgcgttgc gcggtgatgc gcgaatcgag ttggcgcagg
     8521 ctgccggcgg cggcgttgcg cggattggca aagggttttt gcccgttttc ggcttggcgt
     8581 ttattgagcc cggcaaagtc ggctttgagc atcagcactt cgccgcgtac ttcgatgagt
     8641 tcgggcacgt tttcgccgtg cagccgcagg gggatgttgg atacggtttt gacgtttcgg
     8701 gtaacgtctt cgccggtcgt accgtcgccg cgcgttgccg cctgcaccaa tacgccgtcg
     8761 cggtagagca ggctgatggc gaggccgtcg aatttgggtt cgataacgta ttcgggattg
     8821 ccgccgtcca agccgtcgcg cacgcgttgg tcgaaggcgt acatttcggc atggtcgaac
     8881 acgccgtttt catcttgcgg ggaaaaggcg ttggtcagcg acagcatcgg cacttcgtgg
     8941 cgcacttcgg caaagcctgc caaaggctcg ccgccgacgc gctgggtcgg gctgtcgggc
     9001 agcttgagct cgggatggtt tcgttccaac gcttcgagtt cgcggaacag gcggtcgtat
     9061 tcggcatcgg gtatgctggg cgcgtcgagg gtgtagtatt cgtaggcgta gcggttgagg
     9121 aggtcggtga gttcgtgtat gcgttgtgcg gtcgggttca tggattcgta caggttcaga
     9181 cggcatggac aaatgccgtc tgaacggtaa aacgtgttgg aaatggtcgg attttacctg
     9241 aaaacaaaag gcggatgcac cgttgccgat gtatccgcct ttgtgtttgc ggagttatga
     9301 aaacaggcgc agggcggttt tgccgcccgg ttcgataccg actttgagca tctcggactg
     9361 acgcgccaat acataagtgc gtacgtcttt gagccattgg gtcgaaactt cttccatttt
     9421 gtcgttgacc agattcaggt tcaactgacc ggacaggcgt accgccaaat ccataaacaa
     9481 atcgtcgaag gttttttcgc ctgccggaga gtgcgggatg tcgagcagca tactgaagcc
     9541 tttgtaggac tggttgtcca aaagggcatt ggtaaacggc tcgttgttga gcgagcagat
     9601 ggagaacatg gtcgagcccg acgtgtcggt atagtggaac gcgccgtcgt cttccaaaac
     9661 gaaacccacg cccgttacgg cggaacgcag ttctacgccg ctgatgctgg tcggcgaaac
     9721 caaatggatg gcgatggtct ggtcgacgcg cgcgcagaat gcgtccagtg cggaagccac
     9781 ttcgataaag gcggcaaggt cggtgtgcag cgtctgaccg cccatgcttt gtgcgaatgc
     9841 gtccgcctgg cggttgaatg cggagagttc ttcctgcgag gcaagtccgt tgcggctgac
     9901 tgcctggata cccacgataa atgcctgata gcggatgccc gggatgggtt cggcaatctg
     9961 gaaatggtcg tccatggtgc agccgacaat ctggtagcgg cagcggttgg aaaggcgcgg
    10021 cagtgcgtgc agttctttgg cttcggtcag cgcgatatag gagatgaagt cgaagcgcac
    10081 gtcaaaccag ggcagctcga ccttcgacag ctctttgagc gtaatcagcg gttttgccgg
    10141 cgtttgcgga acgggaacgg gttttgccgg cgcgtcggca ggtttcggtg cggaatgtcc
    10201 ggtttggggt tcggaaacgg tgtgggcgga gttgccgata atgccgattt cttccaaggc
    10261 ggtttcgatt tcggttttga acggggaggc ttttgcctgt ttctgcttgg cgatgtagac
    10321 ggcatcctgt tcttgcaggt tgcgcatggc ggagtcttgg ggtttggccg gttttttgac
    10381 cgccggttgg ggtttcggca tcatgactgg cccgccggac ggtttgccgt cgcggacatg
    10441 gctggttttg ctgttgagca gggcatcttt gtcggagtgt ccgaactggt cgcgcacttt
    10501 tttgcggtat tggttttcct gatacatatt gtaggcgaca acggcgagga cggcggcgag
    10561 gaacagtacg atgtaaatca tggcaatcac tttaaatttc gggatgcagg atgcgcaaag
    10621 tgcgggtact gcggttaaat cgggcttgcg tttccggcag tctgacggaa cggccggtta
    10681 taacgtttga attataacga aaattgcagg gtctgacagc agtgtgtcga aataagcgga
    10741 aattttccga aatgccgtct gaaatctgtg gttttcagac ggcatttctg tccacgggaa
    10801 accctttttc ccgtatccgc cgccagtcga aaaaatggcc ggggtcggtt ttgcggccgg
    10861 gtgcgatgtc ttggtgtccc gttaccgccg tgatggggta gcggcggcag agggctgcca
    10921 acagcgtttc gagcgaacgg tattgcgctt cggcaaacgg ttcgaaatcg cagccttcca
    10981 gttcgatgcc gatggaaaac gcgttgcact tctcccgccc ccgaaacgag gatgcgccgg
    11041 cgtggtacgc catgtcgccg catgatacga actgcaccgt ttcgccgtcg cgtgcaatca
    11101 ggaaatggct ggacacgtgc aaagtgtgta tcaggctgaa gaacggatgt ccgtcggggt
    11161 cgagccggtt ggcaaacagc ttttccaccg catccgtgcc gtattcgaac ggcggcagcg
    11221 aaatgttgtg cagcacgatc agggaaaccg tttctcccgt ttccctcggg ctgaaattgg
    11281 gcgacggggt atggcgtatg ctttgaagcc agccgttttg ccagtgtgct ccggcgtgat
    11341 tgtccatgat gttcttcctg tccggcgggc aatttgggtt atactgtcgc ccgaatttta
    11401 agacgtattc cgaatgctgg gaatcctacc atgttgaaaa aaatgttgaa atggactgcc
    11461 gtttttttga ccgtatcggc agccgttttc gccgcgctgc tttttgtccc taaagacaac
    11521 ggcagggcat accgaatcaa gattgccaaa aatcagggta tttcgtcggt cggcaggaaa
    11581 cttgccgaag accgcatcgt gttcagcagg catgttttga cggcggcggc ctacgttttg
    11641 ggtgtgcaca acaggctgca tacggggacg tacagactgc cttcggaagt gtctgcttgg
    11701 gatatcttgc agaaaatgcg cggcggcagg ccggattccg ttaccgtgca gattatcgaa
    11761 ggttcgcgtt tttcgcatat gaggaaagtc atcgacgcaa cgcccgacat cggacacgac
    11821 accaaaggct ggagcaatga aaaactgatg gcggaagttg cgcccgatgc cttcagcggc
    11881 aatcctgaag ggcagttttt tcccgacagc tacgaaatcg atgcgggcgg cagcgatttg
    11941 cagatttacc aaaccgccta caaggcgatg caacgccgcc tgaacgaggc atgggcaggc
    12001 aggcaggacg ggctgcctta taaaaaccct tatgaaatgc tgattatggc gagcctgatc
    12061 gaaaaggaaa cggggcatga ggccgaccgc gaccatgtcg cttccgtctt cgtcaaccgc
    12121 ctgaaaatcg gtatgcgcct gcaaaccgac ccgtccgtga tttacggcat gggtgcggca
    12181 tacaagggca aaatccgtaa agccgacctg cgccgcgaca cgccgtacaa cacctatacg
    12241 cgcggcggcc tgccgccaac cccgattgcg ctgcccggca aggcggcact cgatgccgcc
    12301 gcccacccgt ccggcgaaaa atacctgtat ttcgtgtcca aaatggacgg cacgggcttg
    12361 agccagttca gccatgattt gaccgaacac aacgccgccg tccgcaaata tattttgaaa
    12421 aaataaacca tgccgtctga aaagtttgtg ttttcagacg gcataccctt accggaactg
    12481 caagcatgaa accgcaattc atcactttgg acggcataga cggtgccgga aaatccacca
    12541 accttgccgt catcaaggca tggtttgaac ggagggggct gcccgtgctg ttcacgcgcg
    12601 agccgggcgg aacgccggtc ggtgaggcct tgcgcgaaat cctgctcaac cctgaaacca
    12661 aagccggttt gcgtgcggaa acactgatga tgttcgccgc gcgtatgcag cacatcgagg
    12721 aagtcatcct gcccgcgctt tcagacggca tccatgtcgt gtccgaccgt tttaccgatg
    12781 cgaccttcgc ctatcagggc ggcgggcggg ggatgccgtc tgaagacatt gaaattttgg
    12841 aacattgggt gcagggcggt ttgcgccccg atttgaccct gctgttggat gtgccgctgg
    12901 aagtatcgat ggcgcgtatc ggacaggcgc gcgagaaaga ccggttcgag caggagcagg
    12961 cggatttctt tatgcgtgtg cgcggcgttt atctcgaccg agccgccgcc tgtcccgaac
    13021 ggtacgccgt tatcgacagt aaccgcagct tggatgaagt cagaaacagc atagaaaaag
    13081 tgttggacgg acatttcggc tgttgatgcg gcaaatattg aaacaagcgc atccgcccgc
    13141 gccgaaaacc aaacggcagt gccgcaggtg aaaatggcgg tatgcgccaa actttcggca
    13201 tgatagaatt acgctcggtt acaaggcagg atgcgtcggc aatattaacg aaccgcccgt
    13261 aacatgatga cccgaaagcg tttcggacag ttcgattcaa atctttttct cgcaacagga
    13321 ttgacacatg gaaaactcat tgaaagaagc cgccctcaag ttccacgaat tacccgttcc
    13381 gggcaaaatt tccgttaccc cgaccaaatc tctggcgacc gacaaagatt tggcgttggc
    13441 gtactctccg ggcgtagccg ccccctgtat ggaaatccat gccgatccgc aaaatgccta
    13501 caaatacacc ggcaaaggca acttggtcgc cgtcatttcc aacggtacgg ccgttttggg
    13561 cttgggcgac atcggcgcgc tggcgggcaa acccgtgatg gaaggcaaag gcgtattgtt
    13621 caaaaaattc gccggtgtgg acgtgttcga catcgaaatc gacgaaaaag acccgcaaaa
    13681 actggtggac atcatcgccg ctttggagcc gactttcggc ggcatcaacc tcgaagacat
    13741 caaagcaccc gagtgtttct acatcgaacg cgaattacgc aaacgctgca aaatccccgt
    13801 atttcatgat gaccagcacg gcacggccat cattaccgcc gccgccgtat tgaacgccct
    13861 gcgttatacc ggccgtaaaa tcgaagaagc gactttggtg tgctccggcg caggtgccgc
    13921 cgcgattgcc tgcctgaacc aactgctgga tttgggcttg aaacgtgaaa acgtaaccgt
    13981 ttgcgactcc aaaggcgtga tttaccaaac ccgcgaagac aaagaccgca tggacgaatc
    14041 caaaaaattc tacgccgttg aagacaacgg ccggcgcgta cttgccgatg cggttaaagg
    14101 caaagacatc ttcttgggcc tctccggcgc aaacctgctg acgcctgaaa tgttgaacac
    14161 gatgaacgaa aaacccatcg tgttcgccat ggccaacccg aatccggaaa tcctgccgcc
    14221 gctggcgaaa gaaacccgtc cggacgtggt tatcggtacc ggccgctccg acttcccgaa
    14281 ccaagtgaac aacgtattgt gcttcccgtt catcttccgg ggtgcgttgg atgtcggcgc
    14341 aaccaccatc aacgaagaaa tgaaacgcgc ctgcgtgtat gctttggcag atttggcgat
    14401 ggaagaagta accgaagaag tggttgccgc ttacggtaag aaattcgaat tcggcgcgga
    14461 atacctgatt cctactccgt tcgattcccg cctgctgcct cgcgtcgcta cggctgccgc
    14521 caaagcagcg atggaaagcg gcgtggcaac ccgtccgatt gcagatttgg aagcttacgc
    14581 tgccaagttg ggcgaatgga agctgtaagc cgtttgtggt taaaatgccg tctgaactgt
    14641 tttcaggcgg cattttgttg tcagattgat aaatgaaaga tactggaaaa tgaaagagat
    14701 gaaacctgtc cgttatcata ttggcgatat acccgaaact tcaaaacaaa ccgcccccgg
    14761 tcatgacgac agggcagtgg gtgttgacga tgattgtttt catgattcct ttggtcaata
    14821 tcgttatgtt ttttgtttgg gcgttcggca gaggcaaccc caaccgtgcc aatttctgta
    14881 aagcactgtt cttatttacc ttgttggttc gcttatcggt ttgattttca tattgcttat
    14941 aggtgggtct gcatcgggta cgcattatta atgtgccggc tgattctgct tcgaagattt
    15001 gtatcgaata tgccaaattt ttttaaattt cataccgtta tcgaacggca ttggcaaaaa
    15061 ccttatccgg ttttgtcttt tctgctcaag ccgctttccg ggctgtttgc caaaattgcg
    15121 gcaaaatggc gggcggattt tttatcggga aaacggcaaa gcgaaaagct gtccgtgcct
    15181 gtggtcgtgg tcggcaacat ccacgcgggc gggacgggca aaacgccgat tgccgccgcg
    15241 ctggtgtcgg gcttgcagga aaaaggtgtc aaggtcggca tcatcagccg aggctacggg
    15301 cgcaagagca aggcggttta tgtattgaat gccgcgagcc gtgcggaaga tgcgggcgac
    15361 gagcctttgc tgctgttccg taaaacaggt gcgccgacgg cagtgggcag cagccgtgtg
    15421 gaggcaggca gggcgttgct ggcagcgcat ccggagcttg aattgattgt ggcggacgac
    15481 ggtttgcagc attacgccct gcaacgcgat gtggaaatcg cggtgtttcc ggcggcggat
    15541 acggggcgta cggatttgga cttgctgccc aacggcaatt tgcgcgaacc tttgtcgaga
    15601 ttggaaagcg tggatgcggt ggtggtcggc ggcagggcgg cggatggttt tatgccgtct
    15661 gaacatttgt tcggcagccg tattgaggcg ggtgcggttt accgtttgaa ccgtccgtct
    15721 gaaaaactgg atatttcgac attgtcaggg aagcgcgtcg cagcggttgc cggtatcgcc
    15781 aggccgcagc gtttcttcga tactctgaca cacatgggca tccgccttga ccaaacggtt
    15841 gctctgcccg accatgccga tattttcaat cgggatttgc cgcctgccga tgtggtgctg
    15901 gtaactgaaa aagatgcggt caaattttca gacggcattt gcaccgataa tgtttgggtg
    15961 ctgccggttt gtgcgataat cgaacctgat ttggcggagt ttgtgctgga gcggttggag
    16021 ggtgtaccga aggccgtctg aaagcgcggt ttggacgaag tgataacgga ctggaataag
    16081 aacgccctac gccgtcattc ccgcgcaggc gggaatctaa gtctcgaatt ttcaggaatg
    16141 cctaggagac ttcagaaatc ccaaatctcc ggatttccac ttgggcagga atgagaaagc
    16201 cggttgtatt ttttatctgc attaatcatt cgttaaagga gtggatatga agctgaaaac
    16261 cttgttattg cccttcgccg cactggcatt gtgtgccaac gcatttgccg ccccgcccgg
    16321 cgacgcgtcg ttggcacgtt ggctggatac gcagaatttc gaccgggata tagaaaaaaa
    16381 tatgattgaa ggctttaatg ccggatttaa accgtatgcg gacaaagccc ttgccgaaat
    16441 gccggaagcg aaaaaagatc aggcggcaga agcctttaat cgttatcgtg agaatgtttt
    16501 gaaagatttg attacgcccg aagtgaaaca ggctgtccgc aataccttat tgaagaatgc
    16561 ccgtgaaata tacacgcaag aagaaattga cggcatgatt gccttttacg gttcgcctgt
    16621 cggtcagtcc gtcgttgcca aaaatccgcg cttaatcaag aaatcgatga gtgaaatagc
    16681 ggtatcttgg actgcattgt cagggaaaat cgcgcgacat catctgcccg agtttacgga
    16741 agagttacgg cgcatcatct gcggcggtat agtggattaa atttaaatca ggacaaggcg
    16801 gcgaagccgc agaccgtaca aatagtacgg caaggcgagg caacgccgta ccggtttaaa
    16861 tttaatccac tataaaaatc ccgatgcggg ctgcaagcag gccggacagc ttgggaaaag
    16921 gtatcagaag taaataatag ccgcctgaaa tattgcggag ggcatccgat tgattaaacc
    16981 atcaaacccg aaagcaacct tatggaaaaa aaattcttag acatcctcgt ctgccccgtt
    17041 accaaaggca ggctggaata tcatcaggac aaacaggaat tgtggagccg tcaggcgaag
    17101 cttgcctatc cgattaaaga cggcattccc tatatgctgg aaaacgaagc acgagcgttg
    17161 agcgaagagg aactcaaagc atgaccgaat tcgtcgtatt gattccggcg cggctggatt
    17221 cgtcgcgcct gcccggaaaa gccttggcgg acatccacgg caaaccgatg gtcgtgcgcg
    17281 ttgccgaaca ggcggcaaaa agcaaagccg cgcgcgtcgt cgtcgccacc gatcatcccg
    17341 acattcagac ggcctgtcag gcgcacggta tcgaagtcgt catgacttca aaccggcacg
    17401 aaagcggcac gacgcgcctt gccgaagccg ccgccgcgct gaagctgccg ccgcatttga
    17461 ttgttgtgaa cgtacagggc gacgagccgc tgattgcccc cgaactcatc gaccgcaccg
    17521 ccgaagtact cgtcgaaaac aacgtccaaa tggcgaccgc cggccacgaa ttgcacgatt
    17581 tcgacgaatt gatgaatccc aatgccgtca aagtcgtcct cgacaaaaac ggcaacgcca
    17641 tctacttcag ccgtgccccg attccctatc cgcgcgatgc gatgcgtgcc ggaaaacgcg
    17701 aaatgccgtc tgaaaccgcc gtcctacgcc atatcggcat ttacgcctac cgcgccggct
    17761 tcctgcaacg ctatgccgaa atgagcgtct cgccgctgga aaccatcgaa tcgctggaac
    17821 aactgcgcgt cctgtggcac ggctacccca tcgccgtcga aaccgctaaa gaagcccccg
    17881 ccgccggtgt ggatacgcag gaagatttgg acagggttcg cgctgtattt cagaccgtat
    17941 aaaacaggtt caaagggaaa agatatgcag caacatattg aaaagtggca acacttgagc
    18001 cgtgaagaac agaaaatcct tgccgaagta tggggtctcg tgcaaaacga tgatcaggag
    18061 gttcactatg aaatgctcaa attgaacgca cctgatgaag tcagcggtga attttggttc
    18121 agaatggcag aaacactcag caccctgccg cccaatcgtt ccctcgacct tagaatgaac
    18181 ggcggcaggc tgtcgaccgc cgtatccatc ctttccgtca tgattgaaga caatcccgac
    18241 ataccgcagc tttgggcgta aaaaattacc gccctcaatt atttggtaca cggacacaaa
    18301 gcccgtgccg acggtttggt acaacagccc gacaaagcgg cagaagccaa cgaagaggaa
    18361 tacctgacca aagccctgtc gcaaaacctg ctgtcaacat tggatgcctc acttgcacgt
    18421 tttcctgaag acgcgtggtt tcaggaaatc aaacaggatg cacaaaagca ttttgcttga
    18481 ggacgtggcg gtcaggaata tttccattca ggaagaaaag aagtgcctaa ttgggtataa
    18541 tcagggtaaa tcttatttta tttcaaaaga ttaatatttg ttttccgttt ttccttgacg
    18601 gtatcggaaa agttgattat agttacagct tccttaggag taatggctga gaggctgaag
    18661 gcacttccct gctaaggaag catgtgggat caacctgcat cgagggttcg aatccctctt
    18721 actccgccag ataaaaaata gacgctgtgt tttacagcgt ctattttttt atgcaatttt
    18781 atagcgggtt ggcgcaaacc cggtatggta ttgccctgtc ttgattctga attttgttaa
    18841 tccgagatgt ttgccgttta tttttgcctc gttcaaacgg cggctctgat ctgcgcggtt
    18901 tctgtttgcc gtattcgcct acccgtaccg caaatgttat actgggaaaa actcaccgat
    18961 tgtattttac ggcgtatttg ccgataggat ggaagagaca aatgagcaga atccggcagg
    19021 cttttgccgc tttggatggc ggaaaggcat tgattcccta tattgcggtg ggcgaccccg
    19081 atattcggac aactttggca ttgatgcacg gcatggttgc aagcggtgcg gatattttgg
    19141 agttgggcgt gccgttttcc gatccgatgg cggacgggcc ggttattcag cgtgcggcgg
    19201 agcgggcgtt ggcaaacggg atttcgctgc gcgatgtctt ggatgtcgtc agaaaattcc
    19261 gtgaaaccga cacgcaaacg ccggttgttt tgatgggata tttgaatccc atacataaga
    19321 tgggttatcg ggagtttgct caggaagccg caaaggcggg ggtggacggc gtgttgacgg
    19381 tggattcccc catcgaaacc atcgattctt tatatcgcga gctgaaggat aacgaggtcg
    19441 actgtatttt cctgattgcg ccgacgacga cggaagaccg tattaaaacc attgccgagc
    19501 tggcaggcgg atttgtctat tatgtttcgc tcaagggcgt aacgggcgcg gcaagtttgg
    19561 atacggatga ggtttcgcgt aaaatagagt atttgcgtca gtatatcgat attcccatcg
    19621 gtgtcggttt cggcatcagc aatgcggaaa gcgcgcgcaa aatcggccgg gttgccgacg
    19681 cgatcattgt cggcagccgg attgtgaaag agattgaaaa caatgcgggc aacgaggctg
    19741 ccgccgtcgg tgctttggtc aaagagttaa aggatgccgt gcgctgattc tgtcgcgcat
    19801 tctaaatgtt ttaggagttg tccatgagct ggttagataa aatcctgcca cccaaaatca
    19861 agaatcgtgg gaaagacggt tcttccaatg ttcccgaggg tttgtggcgc aaatgcccgt
    19921 cttgttcggc aaccgtttat tcgaccgagt tgcagcagaa caatcaggtc tgcccgaaat
    19981 gcaaccacca caatccgtta tcggcgcgcc agcgtttgaa cctgcttttg gatgaggaag
    20041 gcagggagga agttgcgggt aatgtcaaac cgaccgatcc tttgaagttt aaagacagca
    20101 aaaaatatcc ggaccgtttg agtgcggcac gcaagctgac cggggaagat gacgcgctgg
    20161 tggtgatgaa ggggatgatg aacggtctgc ccgtcgtcgt tgccgcgttt gaattccgct
    20221 ttatcggcgg ttcgatgggt tcggttgtgg gcgagcgttt cgtacagggt gtccgccgtg
    20281 cggttgccga taattgtccg tttgtctgtg tggcggcttc cggcggcgcg cgtatgcagg
    20341 agggtgtaaa ctcgctgatg cagatgacga aaaccagtgc cgcgctgcat ttgctgacgg
    20401 aaaaacgcct gccgtttata tcggtgttga ccgatccgac tatgggcggc gtatctgcca
    20461 gcttcgcatt tttaggcgat gtcgtgcttg ccgaaccgaa cgcgctgatc ggttttgccg
    20521 gtccgcgcgt gattgagcag acggtgcgcg aaacgctgcc ggaaggcttc caacgcgccg
    20581 agtttctgct ggaaaaaggc gcgatcgacc agattgtcga ccgccgcgat atgaagcggc
    20641 gcatcagtga tttgattacg ctgttgtgcc gtcaggacaa agtttccgcc acctgatggc
    20701 tgatgaatcg aatgccgtct gaaaccgatg tttcagacgg catttttgtg tctggttatt
    20761 tgtcgtgcgg cttcatcgac ggggcatagc gtccggcacg ttctttcagg cgttgtacca
    20821 aaccttgcgt gtcggcgggt acgccgccct cgcagaatgc ctgatacagg acggcgcgca
    20881 atgcgtcgtt gcgcccaagt gtgccgccta tcggtttcca ttcggcgttt cggggctgta
    20941 tccagcggct gttgaccgta tcgccgtatc cgaatacttt gtaggaggaa agtttgccgt
    21001 tgccgaaccc gatggaggag cgggcgcaga atatgccttc ggcagtcagg ttgtcgtagc
    21061 ctttgtcgga gcggatattg agaatgtagc ggatgctgcc gtcgggcgcg ggcataattt
    21121 gcaggctgtc gagcaggatt ttcggctgtt tgccgtaatt ttcatccaca taaatgtcaa
    21181 accagccgtc cgagtgcgca tcgggcagcg gcggcagttc ggcggtatgt tctttaaatt
    21241 cgcgggcggc ggcttcttcg ggcgtttcgc ggtagcgggt gttgatcggc gtgtcttttt
    21301 ggctgaagcc ggcggcaagg gatgtgccga cagtcagggt cagaatcaga aggatggcgc
    21361 ggcgcataag tttctccaaa ttgaaaacgg ctttatttta tggtttggcg ggaagggctg
    21421 caagcaatcg gggtataatc tgacctgatt ttcattttaa agcggtgtcg aaccatgaac
    21481 agcgaaactt tagacgtaac cggattgaaa tgtcccctgc cgattttgcg ggcaaaaaag
    21541 gctttggcgc aaatgcggca gggcgaggta ttgaccgttc tggcgaccga cggcggcgcg
    21601 ccgggggact ttgaggcttt ttgccgccaa accggtcatg tgctgttgga ttcttccgaa
    21661 caggacggcg tgttcacact ggtcgtcaag cacaaataaa tgccgtctga aatgcggatg
    21721 tcctgattga tgttattgct gtcggcattt gtgcttgctg cgtgtaatgc ccaaaaccgg
    21781 caatccggtg tacggcatca ggattttgca cgcgtagccg tcgatttgtt tcggagtgcc
    21841 tgcgtcctga ctcaaggtag tttcgaaccg gtttccaagt ttgccgctgt cggacatttt
    21901 gtccctgtcg gaaaggaaga cctgtcccgt ctgccgcccg ctgttgcaga acccgatgta
    21961 caggcgttgt ggacgcttga acgcgatggc ggcatttatt atttgagcct gacgcgcgac
    22021 agttgcagtg tgaaagccga gcgggcagac agtgccgcgc ttttggaaca tttctcaggg
    22081 cttgtccgac agccgccgaa aaatgccaat atatagt
//
LOCUS       DAXFZM010000024        21976 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.024, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000024 DAXFZM010000000
VERSION     DAXFZM010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21976)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21976)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21976
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.024"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(300..1235)
                     /gene="hemC"
                     /locus_tag="ACFJAG_000805"
     CDS             complement(300..1235)
                     /gene="hemC"
                     /locus_tag="ACFJAG_000805"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004418 - hydroxymethylbilane synthase
                     activity [Evidence IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HFC3980150.1"
                     /translation="MNPKKLVIASRESLLAMWQAKHIQGRLKALYPDCEVEILGMTTR
                     GDRILDRTLSKVGGKGLFVKELEQSLQDGRADLAVHSIKDVPMDLPEGFALAAISERA
                     NPFDAFVSNRYARLEEMPEGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLD
                     NGEYDAIILAAAGLQRLELDERIRMILSESDSLPAAGQGALGIEIATHREDLYEVLKP
                     LNHDTTHACVTAERALARALGGSCQVPLAAYCTEENGLLILRGLVGHPDGSIVLQADA
                     QAPAGYADALGRAVAKKLADDGAQELIGAVLNTEN"
     gene            1354..1869
                     /gene="ybeY"
                     /locus_tag="ACFJAG_000806"
     CDS             1354..1869
                     /gene="ybeY"
                     /locus_tag="ACFJAG_000806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HFC3980151.1"
                     /translation="MKRAKKYPFLTLQRQRFHLNFENASSAAGIPAERDFYRWAWSAL
                     KNEYRRADIGLILLDEEEARAYNRDYRGKDYATNVLSFALNEGEILPCQVSERLYGDL
                     IICPQVVLKEAAEQGKTPERHFAHLTIHGTLHLMGYDHIKDDEAEIMEAEEIRLMRAA
                     GYPNPYREDGH"
     gene            1871..2695
                     /locus_tag="ACFJAG_000807"
     CDS             1871..2695
                     /locus_tag="ACFJAG_000807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HFC3980152.1"
                     /translation="MDGAQPKTNFFERLIARLAREPDSAEDVLNLLRQAHEQEVFDAD
                     TLTRLEKVLDFAELEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKD
                     EVLGILHAKDLLKYMFNPEQFHLKSVLRPAVFVPEGKSLTALLKEFREQRNHMAIVID
                     EYGGTSGLVTFEDIIEQIVGDIEDEFDEDESADNIHSVSAERWRIHAATEIEDINAFF
                     GTEYGSEEADTIGGLVIQELGHLPVRGEKVLIGGLQFTVARADNRRLHTLMATRVK"
     gene            complement(2838..4217)
                     /gene="nhaC"
                     /locus_tag="ACFJAG_000808"
     CDS             complement(2838..4217)
                     /gene="nhaC"
                     /locus_tag="ACFJAG_000808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_function: GO:0015385 - sodium:proton antiporter
                     activity [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC"
                     /protein_id="HFC3980153.1"
                     /translation="MFAFKSLLDMPRGEALAVVVALIAAMGYTIISLEWLPHMSIIAA
                     IVVLILYGLARGLKYNDMQAGMIGALNQGMGAVYLFFFIGLMVSALMMSGAIPTLMYY
                     GFGLISPTYFYFSAFALCSVIGVSIGSSLTACATVGVAFMGMAAAFQADMAMTAGAIV
                     SGVFFGDKMSPLSDTTGISASIVGIDLFEHIKNMMYTTIPAWLISAALMLWLLPSVAA
                     QDLNSVESFRSQLEATGLVHGYSLIPFALLVVLALMRVNAVVAMLFTVIAAVAVTYLH
                     STPDLRQLGAWFYGGYKLEGEAFKDIAKLISRGGLESMFFTQTIVILGMSLGGLLFAL
                     GVIPSLLEAVRTFLTNAGRATFSVAMTSVGVNFLIGEQYLSILLSGETFKPVYDKLGL
                     HSRNLSRTLEDAGTVINPLVPWSVCGVFISHALGVPVWEYLPYAFFCYLSLALTLLFG
                     WTGLTLSKK"
     gene            complement(4507..5730)
                     /locus_tag="ACFJAG_000809"
     CDS             complement(4507..5730)
                     /locus_tag="ACFJAG_000809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar MFS transporter"
                     /protein_id="HFC3980154.1"
                     /translation="MSAQSQNNHTSPLVVLTTLFFMMGFITCMNDILIPHLKEIFDLS
                     YVQAMLIQFCFFTAYAVMSIPMGAFVGKVGYKNGVIGGFLLTAVGCLLFYPAAGSHSY
                     AVFLGALFILASGVTLLQVAGNPYVTLLAKPGKESATLTLVQAFNALGTTIAPQIGAF
                     LILADATQTVSKAEQISSVQIPYLGLAGLLIILAVFVKMIRLPDARKIAAEESAHNHD
                     GKTGVWQYKHLVFGTAGIFCYVGAEVSIGSLMVNVLGYLKGLDHASAAHYLSFYWGGA
                     MVGRFLGSAVMAKFAPNRYLAFNASAAVVLLAVAMATGSGNADVAMWSLLAIGFFNSI
                     MFPTIFSLATKGLGKFTNAASGVLCTAIVGGAVVPVIQGWAADTYTLMSSFVVSVICY
                     LYIVFFAVYGYRADK"
     gene            6167..6580
                     /locus_tag="ACFJAG_000810"
     CDS             6167..6580
                     /locus_tag="ACFJAG_000810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YqaA family protein"
                     /protein_id="HFC3980155.1"
                     /translation="MIPSYTYAALAFSAFTSATLLPGTSEAAFALFVRNFPKHAYGAL
                     LCAGLANGLGSMVSYWMGRLLPSRKMPSEKTLNLIRRFGIWLLAFAWLPVVGDALPLT
                     AGWLRLNPWTSGLMLVIGKTARYAFILWGMQYYAA"
     gene            6627..7256
                     /gene="nth"
                     /locus_tag="ACFJAG_000811"
     CDS             6627..7256
                     /gene="nth"
                     /locus_tag="ACFJAG_000811"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140078 - class I DNA-(apurinic or
                     apyrimidinic site) endonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HFC3980156.1"
                     /translation="MNRQIRQEIFERFRAANPHPTTELNFNSPFELLIAVLLSAQATD
                     VGVNKATAKLFPVADTPQAMLDLGLDGVMEYTKTIGLYKTKSKHIMQTCRILLEKYNG
                     EVPEDREALESLPGVGRKTANVVLNTAFGHPVMAVDTHIFRVSNRTKIAPGKDVREVE
                     DKLMRFIPKEFLMDAHHWLILHGRYTCKALKPQCQTCIINDLCEYPAKS"
     gene            7394..8893
                     /locus_tag="ACFJAG_000812"
     CDS             7394..8893
                     /locus_tag="ACFJAG_000812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegQ family serine endoprotease"
                     /protein_id="HFC3980157.1"
                     /translation="MFKKYQYFALAALCAALLAGCEKAGSFFGADKKEASFVERIEHT
                     KDDGSVSMLLPDFAQLVQSEGPAVVNIQAAPAPRTQNGSGNAETDSDPLADSDPFYEF
                     FKRLVPNMPEIPQEEADDGGLNFGSGFIISKNGYILTNTHVVAGMGSIKVLLNDKREY
                     TAKLIGSDVQSDVALLKIDATEELPVVKIGNPKNLKPGEWVAAIGAPFGFDNSVTAGI
                     VSAKGRSLPNESYTPFIQTDVAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISF
                     AIPIDVAMNVAEQLKNTGKVQRGQLGVIIQEVSYGLAQSFGLDKASGALIAKILPGSP
                     AERAGLQAGDIVLSLDGGEIRSSGDLPVMVGAITPGKEVSLGVWRKGEEITIKAKLGN
                     AAEHTGASSKTDEAPYTEQQSGTFSVESAGITLQTHTDSSGKHLVVVRVSDAAERAGL
                     RRGDEILAVGQVPVNDEAGFRKAMDKAGKNVPLLVMRRGNTLFIALNLQ"
     gene            9096..10616
                     /locus_tag="ACFJAG_000813"
     CDS             9096..10616
                     /locus_tag="ACFJAG_000813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010950999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC family protein"
                     /protein_id="HFC3980158.1"
                     /translation="MQLIDYSHSFFSVVPPFLALALAVITRRVLLSLGIGILVGVAFL
                     VGGNPVDGLTHLKDMVVGLAWADGDWSLGKPKILVFLILLGIFTSLLTYSGSNQAFAD
                     WAKRHIKNRCGAKMLTACLVFVTFIDDYFHSLAVGAIARPVTDKFKVSRAKLAYILDS
                     TASPMCVLMPVSSWGASIIATLAGLLVTYKITEYTPMGTFVAMSLMNYYALFALIMVF
                     VVAWFSFDIGSMARFEQAALNEAHDETAASDATKGRVYALIIPVLALIASTVSAMIYT
                     GAQASETFSILGAFENTDVNTSLVFGGTCGVLAVVLCTFGTIKTADYPKAVWQGAKSM
                     FGAIAILILAWLISTVVGEMHTGDYLSTLVAGNIHPGFLPVILFLLASVMAFATGTSW
                     GTFGIMLPIAAAMAVKVEPALIIPCMSAVMAGAVCGDHCSPISDTTILSSTGARCNHI
                     DHVTSQLPYALTVAAAAASGYLALGLTKSALLGFGTTGIVLAVLIFLLKDKKRADV"
     gene            10673..11758
                     /gene="nagZ"
                     /locus_tag="ACFJAG_000814"
     CDS             10673..11758
                     /gene="nagZ"
                     /locus_tag="ACFJAG_000814"
                     /EC_number="3.2.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HFC3980159.1"
                     /translation="MTVPHIPRGPVMADIAAFRLTEEEKQRLLDPAIGGIILFRRNFQ
                     NIEQLKTLTAEIKALRTPELIIAVDHEGGRVQRFIEGFTRLPAMNVLGQIWDKDGASA
                     AETAAGQVGRVLATELSACGIDLSFTPVLDLDWGNCAVIGNRSFHRNPEAVARLALAL
                     QKGLAKGGMKSCGKHFPGHGFVEGDSHLVLPEDGRSLDELEAADLAPFRIMSREGMAA
                     VMPAHVVYPQVDTKPAGFSEIWLKQILRRDIGFKGVIFSDDLTMEGACGVGGIKERAR
                     ISFEAGCDIILVCNRPDLVDELRDGFTIPDNQDLAGRWQYMENSLGHEAVQAVIQTTG
                     FQAAQAFVAGLASPQDTAGGVKVGEAF"
     gene            11983..12059
                     /locus_tag="ACFJAG_000815"
     tRNA            11983..12059
                     /locus_tag="ACFJAG_000815"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:12017..12019,aa:Pro,seq:cgg)
     gene            complement(12395..13033)
                     /locus_tag="ACFJAG_000816"
     CDS             complement(12395..13033)
                     /locus_tag="ACFJAG_000816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003777273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HFC3980160.1"
                     /translation="MKKISVAPENPQYRIVEIFESLQGEGRNTGMPAVFVRLGKCNLA
                     CGWCDTDYLTFGMMSLSDILGCLKTYAARNIIITGGEPTIQPHLDMLLDTLKAEGYFL
                     CLETNGLKPAPPQIDYVATSPKACYAAKYETNCIAEADEVRIVADGDVLAFCENMERK
                     IRARHYYLSPCEQNGVMNIYDTIRQIGILNSRPDAPVHWQLSVQTHKWAGIE"
     gene            complement(13030..13398)
                     /locus_tag="ACFJAG_000817"
     CDS             complement(13030..13398)
                     /locus_tag="ACFJAG_000817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1304 domain-containing protein"
                     /protein_id="HFC3980161.1"
                     /translation="MKFPSTLLVLLVAAEHFYIAWLEMTQIPGEKAAETFKLPYEFME
                     QKQVQTLFGNQGLYNGFLGIGLVWSRFAVPDHAVYGATIPFLGFVLIAAAWGAFSSGN
                     KGILVKQGLPAFLAAAVLAV"
     gene            complement(13664..14086)
                     /gene="queD"
                     /locus_tag="ACFJAG_000818"
     CDS             complement(13664..14086)
                     /gene="queD"
                     /locus_tag="ACFJAG_000818"
                     /EC_number="4.1.2.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase QueD"
                     /protein_id="HFC3980162.1"
                     /translation="MKITKIFTFDSSHMLDGHDGKCQNLHGHTYKLEITVSDGTIKGG
                     AKDGMVMDFTDLKAIVKQHITDHFDHAFIYHGGNGRESQIAALLEGWNMKTLRLPCRT
                     TAENMAVEMYGRLKNAGLNVCRVKLWETPTSCAEYEGG"
     gene            complement(14174..14689)
                     /locus_tag="ACFJAG_000819"
     CDS             complement(14174..14689)
                     /locus_tag="ACFJAG_000819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1543 domain-containing protein"
                     /protein_id="HFC3980163.1"
                     /translation="MPKLHMFYLGGNAGRSNIEVHDIQFAVCDDYREAVPALKAAWFG
                     DTDKIHIDGWQVVEWADGYDIAVSETPKTKMPPENAPRLYFANVGGYRAGQLAEAHAF
                     GLFAAAMPAEAKQKALQTLLTDYVRQHKDNLKDVDNLLALEHIGNFHIRLTPNPHGKP
                     AEIGFQGYLPI"
     gene            complement(14717..15376)
                     /gene="queC"
                     /locus_tag="ACFJAG_000820"
     CDS             complement(14717..15376)
                     /gene="queC"
                     /locus_tag="ACFJAG_000820"
                     /EC_number="6.3.4.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HFC3980164.1"
                     /translation="MSNQKALVIFSGGQDSTTCLIQAIQTYGRENVQAITFRYGQRHA
                     VELERAEWIAQDLGVSQTVLDLSLMRQITHNALMDETAAIETADNGVPNTFVDGRNAL
                     FLLYAAIFAKGQGIRHIIAGVCETDFSGYPDCRGVFVKSMNVTLNLAMDYDFQIHTPL
                     MYLTKAQTWALADEMGVLDYIREQTHTCYKGIVGGCRECPSCILRERGLAECLESKKA
                     V"
     gene            complement(15561..15766)
                     /locus_tag="ACFJAG_000821"
                     /pseudo
     CDS             complement(15561..15766)
                     /locus_tag="ACFJAG_000821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003779592.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-quinone oxidoreductase"
     gene            15865..17091
                     /locus_tag="ACFJAG_000822"
     CDS             15865..17091
                     /locus_tag="ACFJAG_000822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YihY family inner membrane protein"
                     /protein_id="HFC3980165.1"
                     /translation="MTFLQRWQGLADNKICAFAWFVIRRFSEERVPQAAASMTFTTLL
                     ALVPVLTVMVAVASIFPVFDRWSDSFVSFVNQTIVPQGADMVFDYIDAFRDQANRLTA
                     IGSVMLVVTSLMLIRTIDNAFNRIWRVNTQRPWMMQFLVYWALLTFGPLSLGVGISFM
                     VGSVQDSVLSSGAQQWADALKTAARLAFMTLLLWGLYRFVPNRFVPARQAFVGALITA
                     FCLETARFLFTWYMGNFDGYRSIYGAFAAVPFFLLWLNLLWTLVLGGAVLTSSLSYWQ
                     GEAFRRGFDSRGRFDDVLKILLLLDAAQKEGRTLSVQEFRRHINMGYDELGELLEKLA
                     RYGYIYSGRQGWVLKTGADSIELSELFKLFVYRPLPVERDHVNQAVDAVMTPCLQTLN
                     MTLAEFDAQAKKQQQS"
     gene            complement(17112..17393)
                     /locus_tag="ACFJAG_000823"
     CDS             complement(17112..17393)
                     /locus_tag="ACFJAG_000823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HFC3980166.1"
                     /translation="MIREEISAMPMGYETLIGDMGSALSGGQKQRIVLARALYCEPKI
                     LFLDEAASHLDIANEKAVNANLNGLSIIKIMAAHRKETVESADRKMSLG"
     gene            17472..17588
                     /locus_tag="ACFJAG_000824"
                     /pseudo
     CDS             17472..17588
                     /locus_tag="ACFJAG_000824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(17589..19307)
                     /locus_tag="ACFJAG_000825"
                     /pseudo
     CDS             complement(17589..19307)
                     /locus_tag="ACFJAG_000825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698053.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase domain-containing ABC transporter"
     gene            complement(19409..19624)
                     /locus_tag="ACFJAG_000826"
     CDS             complement(19409..19624)
                     /locus_tag="ACFJAG_000826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980167.1"
                     /translation="MDFAHYLKHWKAAVLIYLAISILTDILCYFLNFDGVFYKGRFFS
                     VTVAGPVGALSFLAYLLYLKREENRSH"
     gene            complement(19638..19985)
                     /locus_tag="ACFJAG_000827"
     CDS             complement(19638..19985)
                     /locus_tag="ACFJAG_000827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980168.1"
                     /translation="MRELTMNEMTAVFGGTEGTWGHRGRVSGEWVGSKVGGALGSFAG
                     AFTGMAGGALVTGGNPAGIAIGGAGGGWVGAEGGSALGGHIGGFAGAKWGKMIDRRNC
                     QCGEDCHCDPCNC"
     gene            complement(20170..21444)
                     /locus_tag="ACFJAG_000828"
     CDS             complement(20170..21444)
                     /locus_tag="ACFJAG_000828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HFC3980169.1"
                     /translation="MNRPKQPFFRPEVAIARQTSLTGKVILTRPLSFSLWTTFASISA
                     LLIILFLIFGNYTRKTTMEGQILPASGVIRVYAPDTGTITAKFVEDGEKVKAGDKLFA
                     LSTSRFGAGGSVQQQLKTEAVLKKTLAEQELGRLKLIHENETRSLKATVERLENQKLH
                     ISQQIDGQKRRIRLAEEMLRKYRFLSANDAVSKQETMNVEAELLEQKAKLDAYRREEA
                     GLLQEIRTQNLTLASLPKRHETEQSQLERTIADISQEVLDFEMRSEQIIRAGRSGYIA
                     IPNVEVGRQVDPSKLLLSIVPERTELYAHLYIPSSAAGFIKPKDKVVLRYQAYPYQKF
                     GLASGSVVSVAKTALGRQELSGLGMVSSDLAKSNEPVYLVKIKPDKPTITAYGEEKPL
                     QIGMTLEADILHEKRRLYEWVLEPIYSMSGRL"
     gene            complement(21505..21858)
                     /locus_tag="ACFJAG_000829"
     CDS             complement(21505..21858)
                     /locus_tag="ACFJAG_000829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980170.1"
                     /translation="MIELQLHELKLVSGGGPVTDNIAGNVANAATTKGGPTWGDFVAI
                     PAAAATVHFLPKNFFGAIGANGVYNLTRDWVNDAVNAPPYNGRPIFEIEHGLTAPATK
                     ADKSGNGYTDGTDYC"
BASE COUNT         5387 a         6031 c         5482 g         5076 t
ORIGIN      
        1 ggtgtggaat ttagggataa tctagtacag ccacaataaa aaatacgaat atcatcattc
       61 tcaaattcaa aatttgaacg ccacagtatt atccgaagcc acaaaaacct ttccgccgtc
      121 attcccgcgc aggcgggaat ctggaaaccc aatgctgcaa gaattgatta aaaacaactg
      181 aaaccgagca aactggattc ccgcctgcgc gggaatgacg aaataaggtg agtaaaactt
      241 attaaataaa ttaattaaaa acaataactt atattatttt ctttaaattt tcgataaaat
      301 caattttccg tattcaatac tgctccaatc aattcctgcg caccgtcgtc cgccagtttt
      361 ttggcaaccg cacgtccaag cgcatcggca tatccggcag gggcttgcgc gtccgcctgc
      421 aacacaatcg atccgtcggg atgcccgacc aatccgcgca agatcagcag cccgttttct
      481 tcagtgcaat acgcggccag cggcacttgg cagcttccgc ccaaagcgcg cgccaaagcg
      541 cgttcggcgg taacgcaggc gtgtgtggta tcgtggttta acggcttcaa gacttcgtac
      601 aaatcttcgc gatgcgtggc aatttcaata cccaatgcgc cttgtccggc ggcaggcagg
      661 ctgtcggatt ccgacaaaat catgcggatg cgttcatcca attccagacg ctgcaacccg
      721 gcggcagcca agataattgc atcgtattcg ccgttgtcga gtttggacaa acgggtttgt
      781 acattgccgc gcaggggttt aatcaccaaa tgcggatagc gcgcgcgcaa ctgggcttcg
      841 cggcgcaggc tggatgtgcc gacaaccgcg ccttcgggca tttcttccaa acgcgcgtat
      901 cggttggaca caaacgcgtc aaacggattg gcgcgttcgc tgatggcggc aagggcgaag
      961 ccttcgggca aatccatcgg cacgtcctta atcgaatgca ccgccaaatc ggcgcgcccg
     1021 tcttgaaggg attgttccaa ctctttgaca aacaagcctt tcccgccgac ttttgacaaa
     1081 gttctgtcca aaatccggtc gccgcgcgtg gtcatgccca aaatttcgac ttcgcaatcg
     1141 ggatacagcg ccttcagacg gccttggata tgtttcgcct gccacatggc aagcaggctt
     1201 tcgcggctgg cgataacaag ttttttcggg ttcatgttca atgcgttcaa agaatggaaa
     1261 cggcgtggag tctatcatat tttgaacgtt tcttcagacg ccaccgtcag gtctatgtta
     1321 tatttacgcc cacaaaacac gaaacccgcc acaatgaaac gcgccaaaaa ataccctttc
     1381 ttaacgttgc agcggcaacg tttccatttg aactttgaaa acgcctcttc cgccgccggc
     1441 atccccgccg aacgcgattt ttaccgctgg gcgtggtctg ccttgaaaaa cgaataccgc
     1501 cgcgccgaca tcggtttgat tcttttggac gaagaagaag cccgcgccta caaccgcgac
     1561 taccggggca aagattatgc caccaatgta ttgagtttcg cgctcaacga aggcgaaatc
     1621 ctgccctgcc aagtttcgga aagactgtac ggcgatttga ttatctgccc gcaagtcgtt
     1681 ttaaaagaag ccgccgaaca gggcaaaacg cctgaacggc attttgccca cttaaccata
     1741 cacggcacgc tgcacctgat gggatacgac cacatcaaag acgatgaggc cgaaataatg
     1801 gaagccgaag aaatccgcct gatgcgggcg gcaggctatc ccaaccccta ccgagaggac
     1861 ggacattaaa atggacggcg cacaaccgaa aacaaatttt tttgaacgcc tgattgcccg
     1921 actcgcccgc gaacccgatt ccgccgaaga cgtattaaac ctgcttcggc aggcgcacga
     1981 acaggaagtt tttgatgccg acacactgac ccggctggaa aaagtattgg actttgccga
     2041 gctggaagtg cgcgatgcga tgattacgcg cagccgcatg aacgtattga aagaaaacga
     2101 cagcatcgaa cgcatcaccg cctacgtcat cgataccgcc cattcgcgct tccccgtcat
     2161 cggcgaagac aaagacgaag ttttgggcat tttgcacgcc aaagacctgc tcaaatatat
     2221 gttcaacccc gagcagttcc acctgaaatc cgtcttgcgc cctgccgttt tcgtgcccga
     2281 aggcaaatct ttgaccgccc ttttaaaaga gttccgcgaa cagcgcaacc atatggcaat
     2341 cgtcatcgac gaatacggcg gcacgtcggg tttggtcacc tttgaagaca tcatcgagca
     2401 aatcgtcggt gacatcgaag acgagtttga cgaagacgaa agcgccgaca acatccactc
     2461 cgtttccgcc gaacgctggc gcatccacgc ggctaccgaa atcgaagaca tcaacgcctt
     2521 tttcggtacg gaatacggca gcgaagaagc cgacaccatc ggcggcttgg tcattcagga
     2581 attgggacac ctgcccgtgc gcggcgaaaa agtccttatc ggcggtttgc agttcaccgt
     2641 cgcccgcgcc gacaaccgcc gcctgcacac gctgatggcg acccgcgtga agtaagcaga
     2701 gcctgcccgc accgccgttt ctgcacagtt taggatgacg gtacggtcgt tttctgtttc
     2761 aatccgcccc atccgccaaa cataaaaatg ccgtctgaaa ccggaaaaca ggttcagacg
     2821 gcatttcgct tatccgctta ttttttgctc aaagtcagcc ccgtccagcc gaataacagg
     2881 gttaaagcca aactcaaata gcagaaaaag gcataaggca gatattccca aacgggtacg
     2941 ccaagggcgt ggctgataaa tacgccgcac acgctccacg gcacgagcgg gttaatcacc
     3001 gtccccgcat cttccagagt ccgcgacagg ttgcgcgaat gcaggccgag tttgtcgtaa
     3061 acgggtttga acgtttctcc cgaaagcagg atgctcaaat attgctctcc aatcaggaaa
     3121 ttgaccccga ccgaagtcat ggcaacgctg aacgtcgcgc gtccggcatt cgtcaagaag
     3181 gtacggacgg cctccagcaa ggaaggaatc acaccgagcg caaacagcag cccgcccaaa
     3241 ctcataccga ggataacgat ggtctgcgta aagaacatac tctccaagcc gccgcgcgaa
     3301 atcagtttgg caatgtcttt aaacgcttcg ccttcgagtt tgtagccgcc ataaaaccac
     3361 gcgccgagct gacgcagatc gggcgtgctg tgcagatacg ttacggcaac ggcggcaatg
     3421 acggtaaaga gcatggcgac cacggcattg acgcgcatca atgccaaaac gaccaacagt
     3481 gcaaacggaa tcagcgaata gccgtgcacc aatcccgtgg cttcaagctg gctgcggaag
     3541 gattcgacgc tgttcaaatc ctgcgcggcg acgctgggaa gaagccaaag catcagtgcc
     3601 gcgctgataa gccacgcagg gatggtggtg tacatcatgt ttttgatgtg ttcaaacagg
     3661 tcgataccga cgatggacgc ggaaatgccc gtggtgtcgg aaagcgggga cattttatcg
     3721 ccgaaaaaca caccggaaac aatcgcgccc gccgtcatcg ccatatcggc ctgaaacgcc
     3781 gccgccatcc ccataaaggc aacgccgaca gtggcgcagg cggtcaggct gctgccgatg
     3841 gacacgccga tgacggaaca cagcgcgaag gcggaaaaat aaaaataagt cggggaaatc
     3901 agcccgaaac cgtaatacat cagcgtcgga atcgcgccgc tcatcatcag cgcgctgacc
     3961 atcagcccga tgaagaaaaa caggtaaacc gcgcccatac cctgattcaa cgcgcctatc
     4021 atccctgcct gcatatcgtt gtatttcaaa ccgcgcgcca agccgtacaa aatcagcacg
     4081 acgatggcgg caataatgga catatgcggc agccactcca atgaaatgat ggtatagccc
     4141 attgcggcaa tcagagcgac gacgacggca agtgcctcac cgcgcggcat atcgagtaag
     4201 gatttgaaag caaacatgat tctttgcccg atttgatata aagttaacgg attctaacac
     4261 accatgccga atctgcccga cgttttcaga cggcatttta gcgttttaca aaagccgggc
     4321 agaaacaaaa cggcaatttt ctcgatttaa attaattttt ttgaaatata atttttattt
     4381 ttttatttgt tggcatataa gacttttatg gattgaagta ttaaaacctc ggcacacacg
     4441 ccgcaaacac cggtacgcaa aaatgccgtc tgaaagatgt tcagacggca tttctcaaga
     4501 aaaagattat ttgtccgccc tatatccgta caccgcaaaa aacacgatat acaggtaaca
     4561 gataacggaa acgacaaacg aagacatcag ggtgtaagta tccgccgccc aaccttgaat
     4621 taccggcacg accgcaccgc cgacaatcgc ggtacacagc acaccggaag ccgcgttggt
     4681 gaatttgccc aaccctttgg ttgccaaaga gaaaatcgtc gggaacataa tcgagttgaa
     4741 aaaaccgatg gcaagcagcg accacatcgc cacatccgca ttgccgctgc ccgtcgccat
     4801 cgcgacggca agcagcacga ccgcagccga tgcgttaaac gccaaataac ggttgggcgc
     4861 gaatttcgcc attaccgccg aaccgaggaa acgtccgacc atcgctccgc cccaataaaa
     4921 cgacaggtaa tgcgcggcag aagcatgatc cagccctttc agataaccca acacattgac
     4981 catcagcgaa ccgatagaca cctccgcacc gacgtagcag aaaatgcctg ccgtaccgaa
     5041 cacgagatgt ttgtattgcc atacgccggt tttgccgtcg tggttgtgcg cgctttcctc
     5101 ggcggcaatt ttgcgcgcgt cgggcagccg gatcattttc acgaaaacgg caaggataat
     5161 cagcagcccc gccagtccca aatagggaat ctgtacggaa gaaatctgtt ccgccttgct
     5221 gacggtttgg gttgcgtccg ccaaaatcag gaacgcgccg atttgaggcg caatggtcgt
     5281 acccaaagcg ttaaacgcct gaaccagcgt cagcgttgcc gattccttgc cgggtttcgc
     5341 cagcagggta acataaggat taccggcgac ctgaagcagc gttacgccgg aagccaaaat
     5401 aaacaacgcg cccaaaaata ccgcgtaaga atggctgccc gcagcaggat aaaacagcag
     5461 gcacccgacc gccgtcagca gaaagccgcc gataacgccg tttttgtagc cgactttgcc
     5521 gacaaaagcc cccatcggga tggacattac cgcataggcg gtaaaaaagc aaaattgaat
     5581 cagcatcgcc tgaacgtaag agaggtcgaa aatttctttc aaatgaggga taaggatgtc
     5641 gttcatgcag gtaataaaac ccatcatgaa gaacagcgtg gtcaagacga ccaatgggga
     5701 cgtatggttg ttttgtgatt gcgcagacat gatttgcctt tcgtggtgtc ggaatattgc
     5761 ccgtttcaag aaaatagaaa ttgacatttc ttaacggcaa tgcaaatcat actgatattt
     5821 gaacattttg caaactttat cggatgcagg caatgcgccg atctgaaatt caagcagcag
     5881 aaattaatat tttacagttg tttgcatagg ttttaataga ttttaaaaaa ttccggcggg
     5941 cttgcaaaaa ccgttcccaa taaaatgaaa atcctccgcc gtatccggaa aattcggaaa
     6001 tgccgcatcg gggcatcaaa accggagcgg aaagaatgtc gtatgcccga caaataaagg
     6061 ggcatacggc tgtgccgtat ttttgcaccg tcctccgccc ttcggcgggg gcgtgaaaat
     6121 accgtataat ccgtcgccga tttttacctg tttgggactg tttgcaatga taccctccta
     6181 cacctacgcc gccctcgctt tttccgcctt cacttccgcc accctcctgc ccggcacgtc
     6241 cgaagccgcc ttcgccctgt tcgtccgcaa cttccccaaa cacgcatacg gcgcgttgct
     6301 gtgcgccggc cttgccaacg gattgggcag tatggtttcc tattggatgg gacgtttgct
     6361 gccttcccga aaaatgccgt ctgaaaaaac actgaatctg atacggcgtt tcggtatttg
     6421 gctgcttgcg tttgcgtggc tgcccgtcgt cggcgacgca ctgccgctta ccgccggctg
     6481 gctgcggttg aatccgtgga caagcgggct gatgctggtt atcggcaaaa cggcgcgtta
     6541 cgccttcatt ctgtggggaa tgcaatatta cgccgcctga accgtgcgtt ataatgccga
     6601 ccgcacaaac cgactgcaca aaaaaaatga acagacaaat ccgccaagaa atcttcgagc
     6661 gtttccgcgc cgccaacccc catccgacca ccgagctgaa tttcaactcc cctttcgagc
     6721 ttttaatcgc cgttctgctt tcggcgcagg cgaccgatgt cggcgtaaac aaggcgacgg
     6781 cgaagctgtt tccggttgcc gatacgccgc aggcgatgct ggatttgggt ttggacggcg
     6841 tgatggaata cacgaaaacc atcgggctgt ataaaaccaa gtccaaacac attatgcaaa
     6901 cctgccgcat cctgctggaa aaatacaacg gcgaagtgcc ggaagaccgc gaggctttgg
     6961 aatcgttgcc tggcgtgggg cgcaaaacgg caaacgtggt attgaacaca gcgttcggac
     7021 accccgttat ggcggtcgat acgcatattt tccgcgtgtc caaccgaacc aaaatcgcac
     7081 caggaaaaga tgtacgcgaa gtcgaagaca aactgatgcg cttcattcct aaagaatttc
     7141 tgatggacgc gcaccactgg ctgattttgc acggacgcta cacctgcaag gctttaaagc
     7201 cgcaatgcca aacctgcatc atcaacgatt tgtgcgaata tcccgccaaa tcctgaccgc
     7261 cgccgccctt caaaatgaaa cgcttgaaaa ttcggacgga cgttgtagaa tttcaaccta
     7321 tgccgtctga agccgacaaa atgcgcttca gacggcatta aagccggtac cggcatccga
     7381 caaaggacaa aacgtgttca aaaaatacca atacttcgct ttggcggcac tgtgtgccgc
     7441 cttgctggca ggctgcgaaa aggcaggcag ctttttcggt gcggacaaaa aagaagcatc
     7501 cttcgtagaa cgcatcgaac acaccaaaga cgacggcagt gtcagtatgc tgctgcccga
     7561 ctttgcccaa ctggttcaaa gcgaaggccc ggcagtcgtc aatattcagg cagcccccgc
     7621 cccgcgcacc caaaacggca gcggcaatgc cgaaaccgat tccgacccgc ttgccgacag
     7681 cgacccgttc tacgaatttt tcaaacgcct cgtcccgaac atgcccgaaa tcccccaaga
     7741 agaagcagat gacggcggat tgaacttcgg ttcgggcttc atcatcagca aaaacggcta
     7801 catcctgacc aatacccacg tcgttgccgg tatgggcagt atcaaagtcc tgctcaacga
     7861 caagcgcgaa tataccgcca aactcatcgg ttcggatgtc caatccgatg tcgcccttct
     7921 gaaaatcgac gcaacggaag agctacccgt cgtcaaaatc ggcaatccca aaaatttgaa
     7981 accgggcgaa tgggtcgctg ccatcggcgc gcccttcggc tttgacaaca gcgtgaccgc
     8041 cggcatcgtg tccgccaaag gcagaagcct gcccaacgaa agctacacac ccttcatcca
     8101 aaccgacgtt gccatcaatc cgggcaattc cggcggcccg ctgttcaact taaaaggaca
     8161 ggtcgtcggc atcaattcgc aaatatacag ccgcagcggc ggattcatgg gcatctcctt
     8221 tgccatcccg attgacgttg ccatgaatgt cgccgaacag ctgaaaaaca ccggcaaagt
     8281 ccaacgcgga caactgggcg tgattattca ggaagtatcc tacggtttgg cacagtcgtt
     8341 cggtctggat aaagccagcg gcgcattgat tgccaaaatc cttcccggca gccccgcaga
     8401 acgtgccggc ctgcaggcgg gcgacatcgt cctcagcctc gacggcggag aaatacgttc
     8461 ttccggcgac cttcccgtca tggtcggcgc cattacgccg ggaaaagaag tcagcctcgg
     8521 cgtatggcgc aaaggcgaag aaatcacaat caaagccaag ctgggcaacg ccgccgagca
     8581 taccggcgca tcatccaaaa cagatgaagc cccctacacc gaacagcaat ccggtacgtt
     8641 ctcggtcgaa tccgcaggca ttacccttca gacacatacc gacagcagcg gcaaacacct
     8701 cgtcgtcgta cgggtttccg acgcggcaga acgcgcaggc ttaaggcgcg gcgacgaaat
     8761 cctcgccgtc gggcaagtcc ccgtcaatga cgaagccggt ttccgcaaag ctatggacaa
     8821 ggcaggcaaa aacgtccccc tgctggtcat gcgccgtggc aacacgctgt tcatcgcatt
     8881 aaacctgcaa taacgcacat aatttaacca aaatattttt aaatgataaa atgcccgtca
     8941 ataccgatta acgggcattt tacaaaaatc agttggttga ttttaaacaa atatttttta
     9001 cgacaaaaaa tatttccacc cattttgcca acaaaaccca aaccggaggc ggacagatac
     9061 ccacccatcc ggacgcttaa caccccccat aaaccatgca gctgattgac tattcacatt
     9121 catttttctc ggttgtgcca ccctttttgg cactggcact tgccgtcatt acccgccgcg
     9181 tactgctgtc tttaggcatc ggtattttgg tcggcgttgc ctttttggtc ggcggcaacc
     9241 ccgtcgacgg tctgacacac ctgaaagaca tggtcgtcgg cttggcttgg gcagacggcg
     9301 attggtcgct gggcaaacca aaaatcttgg ttttcctgat acttttgggc attttcactt
     9361 cactgctgac ctactccggc agcaatcagg cgtttgccga ctgggcaaaa cggcacatta
     9421 aaaaccggtg cggcgcgaaa atgctgaccg cctgcctcgt gttcgtaacc tttatcgacg
     9481 actatttcca cagcctcgcc gtcggtgcga ttgcccgccc cgttaccgac aagtttaaag
     9541 tttcccgcgc caaactcgcc tacatcctcg actccactgc ctcgcccatg tgcgtgctga
     9601 tgcccgtttc aagctggggc gcgtcgatta tcgccacgct tgccggattg ctcgttacct
     9661 acaaaattac cgaatacacg ccgatgggga cgtttgtcgc catgagcctg atgaactatt
     9721 acgcgctgtt tgccctgatt atggtattcg tcgtcgcatg gttctccttc gacatcggct
     9781 cgatggcgcg tttcgaacag gctgcgttga acgaagccca cgacgaaacc gccgcttcag
     9841 acgctaccaa aggtcgtgtt tacgcattga ttattcccgt tttggcctta atcgcctcaa
     9901 cggtttccgc catgatctac accggcgcgc aggcaagcga aaccttcagc attttggggg
     9961 catttgaaaa taccgacgta aacacttcgc tggtattcgg cggcacttgc ggcgtgcttg
    10021 ccgtcgtcct ctgcacgttc ggcacgatta aaaccgccga ttatcccaaa gccgtgtggc
    10081 agggtgcgaa atccatgttc ggcgcaatcg ccattttaat cctcgcctgg ctcatcagta
    10141 cggttgtcgg cgaaatgcac acgggcgact acctctccac gctggttgcg ggcaacatcc
    10201 atcccggctt cctgcccgtc atcctcttcc tgctcgccag cgtgatggcg tttgccacag
    10261 gcacaagctg ggggacgttc ggcattatgc tgccgattgc cgccgccatg gcggtcaaag
    10321 tcgaacccgc gctgattatc ccgtgtatgt ccgcagtaat ggcgggggcg gtatgcggcg
    10381 accactgttc gcccatctcc gacacgacca tcctgtcgtc caccggcgcg cgctgcaacc
    10441 acatcgacca cgttacctcg caactgcctt atgccctgac ggttgccgcc gccgccgcat
    10501 cgggctacct cgcattgggt ctgacaaaat ccgcgctgtt gggctttggc acgaccggta
    10561 ttgtattggc ggtgctgatt tttctgttga aagataaaaa acgcgccgac gtttgacctt
    10621 cccccctgtt cagacggcat atgccgtctg aagttttttg gagcaaaccg caatgaccgt
    10681 cccccatatt ccgcgcggcc ccgtcatggc agacattgcc gccttccgcc tgaccgaaga
    10741 agaaaaacaa cgcctgctcg atcccgcaat cggcggcatc atcctcttcc gccgcaactt
    10801 ccaaaacatc gaacaactca aaacactcac cgccgaaatc aaagccctgc gcacacccga
    10861 actcattatc gccgtcgatc acgaaggcgg cagggtgcaa cggtttatcg aaggcttcac
    10921 ccgcctgcct gcaatgaacg ttttagggca aatttgggac aaagacggcg cgtccgccgc
    10981 cgaaaccgct gccggacaag tcggccgggt tttggcaacc gagctttccg cctgcggcat
    11041 cgatttgtcc ttcacgcccg tcttagattt ggactgggga aactgcgccg tcatcggcaa
    11101 ccgcagcttc caccgcaatc ccgaagcggt cgcccgcctc gccctcgccc ttcaaaaagg
    11161 tttggcaaaa ggcggtatga aatcatgcgg caaacatttc cccggacacg gatttgtcga
    11221 aggggacagc catttggtgc tacccgaaga cgggcgcagc ctcgacgaac tcgaagccgc
    11281 cgacctcgcc cccttccgca ttatgagccg cgaaggtatg gcggcggtca tgcccgccca
    11341 cgtcgtttat ccgcaagtgg acacaaagcc cgcagggttt tccgaaatct ggctgaaaca
    11401 gattttgcgc cgcgacatcg ggttcaaagg cgtgattttc tcggacgatt tgaccatgga
    11461 gggcgcgtgc ggagtcggcg gcatcaaaga acgcgcccgc atttcctttg aggcaggttg
    11521 cgacatcata ttggtctgca accgtcccga cttggtcgat gaattgcgcg acggtttcac
    11581 cattcccgac aaccaggatt tggccggacg ttggcaatac atggaaaact cgctcggtca
    11641 tgaggcggta caagccgtta tacagacaac gggtttccaa gcggcgcaag cctttgttgc
    11701 cggccttgcc tcgccgcagg acacggcggg cggcgtaaaa gtcggagagg ccttttaaac
    11761 cggctgcgtt tcaacaatct gccgatttca accgttcgtc agggaaaggc aatgattttt
    11821 tcggtcaaat agaaagttat cttattgaat tactttgaga taaggatgct tatcaatact
    11881 gtattcaaac acagcccttt aaatccgccc gacacgcggc aaaaaggcaa aacggtatag
    11941 gcacgccgta ttttttgcgc tataatcaca ccttaattaa ttcggaatgt agcgcagccc
    12001 ggtagcgcac ttcgttcggg acgaaggggt cggaggttcg aatcctctca ttccgaccat
    12061 attcagaccg cctcgacatc gattgccggg gcggtttttc ccttttggcg gcaacaaaaa
    12121 aatgccgtct gaaacagaat gctgtttcag acggcatttc gttttcccca atcctgccat
    12181 ttgcgcgcac tgacaaaggg tatcggcaag gttcaaaaga ccatcggaat ctaggaagcc
    12241 tggcgtgtac ccaaccgcgg catcttattc attaaggctt cgtcctgatt gggcggcgga
    12301 aatgtcggca gtttcacgcg gaagcggcac actttccccg tatgtcaaac atcggcaaga
    12361 aggtacgcct gccctttggg ttacactgct taaactactc tatccccgcc catttgtgcg
    12421 tctgcacgct caactgccaa tgcacgggcg cgtcggggcg gctgtttaaa ataccgattt
    12481 ggcggatggt gtcgtagatg ttcatcacgc cgttttgttc gcagggagaa agatagtaat
    12541 ggcgcgcacg gattttgcgt tccatatttt cgcaaaacgc aaggacatcg ccgtcggcaa
    12601 caatccgtac ttcgtcggct tcggcgatgc agttggtttc atacttggcg gcgtagcagg
    12661 ctttggggct ggtggcgaca tagtcgattt gcggcggcgc gggcttgagc ccgttggttt
    12721 cgagacagag gaaatagcct tccgccttga gcgtgtccag cagcatatcg agatgcggct
    12781 ggatggtcgg ctctccgccg gtgatgatga tgttgcgggc ggcataagtt ttcagacagc
    12841 ctaagatgtc ggacaggctc atcataccaa atgtcaaata atcggtatca caccagccgc
    12901 acgccagatt gcatttgccc aagcggacga aaacggcagg catacccgtg tttcggccct
    12961 caccttgcag gctttcaaag atttcgacga tgcggtactg gggattttcg ggggcgacgc
    13021 tgattttttt cataccgcca acaccgccgc cgccaaaaat gcgggcaaac cttgtttgac
    13081 gagtatgcct ttgttgccgg acgaaaacgc accccacgcg gcggcaatca ggacgaagcc
    13141 gagaaacgga atcgttgcgc cgtaaacggc atgatccggc acggcaaacc gcgaccacac
    13201 cagcccgatg ccgagaaagc cgttatacag cccttggttg ccgaacaggg tctgcacttg
    13261 cttttgttcc ataaattcat aaggcagctt gaacgtttcc gccgcttttt cgccgggaat
    13321 ctgtgtcatt tcaagccagg cgatgtagaa atgttcggcg gcgacgagga ggactaagag
    13381 ggtggagggg aatttcatgg gtgttccttt taatgggtgt gtcggtatgg aatgccgtct
    13441 gaagaacgga gaatccgcac aggagaaaaa ccgctttgcg gtaaattcaa ataaggacgc
    13501 tccacactgt cattcccgcg caggcgggaa tccagagatt tggaattgct gcaattttta
    13561 aatattcctg ataaatcaag gtctggattc ccgcctgcgc gggaatgacg cggttgggca
    13621 tgtcttattt gaatttacta tatcgatacg ttcaagattt tccctacccc ccttcatact
    13681 ccgcgcacga tgtcggcgtt tcccacaatt tgacgcggca cacgttcagc cccgcgtttt
    13741 tcaaacgtcc gtacatttca accgccatat tttcggcagt ggtgcggcag ggcaggcgca
    13801 gggttttcat gttccagccc tccaagagcg cggcgatttg agattcgcgg ccattgccgc
    13861 cgtggtagat gaaggcgtgg tcgaaatggt cggtaatgtg ttgtttcaca atggctttca
    13921 agtcggtaaa gtccatcacc ataccgtctt tcgctccgcc tttgatggtg ccgtctgaaa
    13981 cggtgatttc gagtttgtag gtatgcccgt gcaggttttg gcatttgccg tcatgcccgt
    14041 cgagcatatg cgaggagtcg aaggtaaata tcttggtaat tttcatcccg attccttttc
    14101 agtgaaaacc ccgccgcttt ccgcccggag ggtggcttga tgtgtcgttt tgcgtggaaa
    14161 catatccgct gcttcaaatg ggcaaatagc cttgaaagcc gatttcggcg ggtttgccgt
    14221 gcggattcgg ggtcaggcgg atatggaaat tgccgatgtg ctcgagcgca agcaggttgt
    14281 ccacgtcttt caagttgtct ttatgctgcc gaacatagtc ggtcaacagg gtttgcaggg
    14341 ctttttgttt ggcttcggca ggcatggcgg cggcgaacag cccgaacgcg tgcgcctcgg
    14401 caagctgccc cgcgcgatag ccgccgacat tggcaaaata caggcgcgga gcgttttcag
    14461 gcggcatttt cgttttgggc gtttcggata cggcgatgtc gtaaccgtcc gcccattcga
    14521 caacctgcca accgtcgatg tggattttgt ccgtatcgcc gaaccacgcg gctttgagtg
    14581 cggggacggc ttcgcggtag tcgtcgcaca cggcaaattg gatgtcgtgc acttcgatat
    14641 tcgaccggcc ggcattgccg ccgaggtaaa acatatggag cttgggcata tcgtattcct
    14701 tgtgctttgc gcgcgttcag acggcctttt tactttccag acattccgcc agcccgcgtt
    14761 cgcgcaagat acagctcggg cattcgcggc agccgccgac gatacccttg tagcaggtgt
    14821 gggtctgttc gcggatgtag tccaacacgc ccatttcgtc cgccaacgcc cacgtttgcg
    14881 ccttggtcag gtacatcagc ggcgtgtgga tttgaaaatc gtagtccatc gccagattaa
    14941 gggtaacgtt catggatttg acgaacacgc cgcggcagtc gggatagccc gaaaaatcgg
    15001 tttcgcacac gcccgcgatg atgtgccgga taccctgccc tttggcaaaa atggcggcgt
    15061 aaagcaggaa aagcgcgtta cgcccgtcca caaaggtatt gggaacgccg ttgtcggcgg
    15121 tttcgatggc ggcggtttcg tccatcaggg cgttgtgcgt aatctgccgc atcaggctca
    15181 aatcgagtac ggtttgactg acacccaaat cctgcgcgat ccactctgcg cgttccagct
    15241 cgacggcatg gcgttgcccg tatcggaagg taatggcttg gacgttttcg cgcccgtagg
    15301 tttggattgc ctgaatcagg caggtggtcg aatcctggcc gcccgagaag atgaccaagg
    15361 ctttttggtt tgacatatcg aatcctagtt ttggtaacgc gggaggtttg cgaaccgcga
    15421 agttggacag taaagacgcg gattatacag gcaaacgcgt tcagacggca tctgaacgcc
    15481 atgccgtctg aacacgcggc gtatgccgac ttgacggcga attccgccaa gcgtctgcct
    15541 tgtgcgaagg cgatattgtt ttcttcggcg gtcaggacgg gagccgctgt cgggaatatc
    15601 tttatttgac ggcttcgcag acggcggaca ctttggggac ggtgcgcaat acggcttcgc
    15661 aaccttcaac gctgtcgatg ccgcgagtga ttcggcgtgc gggattgcgg gtgctgccgt
    15721 tttgggaata gtagaggacg aggattttga ggggatttgg gttcatgggc ggattccgtt
    15781 aaaatagttt ggtgttcaga cggcataacg gttgtccaga tgccgtctga aacagtttga
    15841 aaacatgaaa cctggtaaga gattatgacc tttttacaac gttggcaagg tttggcggac
    15901 aataaaatct gtgcatttgc atggttcgtc atccgccgtt tcagtgaaga gcgcgtaccg
    15961 caggcagcgg cgagcatgac gtttacgaca ctgctggcac tcgtccccgt actgaccgta
    16021 atggtcgcgg tcgcttcgat tttccccgtg ttcgaccgct ggtcggattc gttcgtctcc
    16081 ttcgtcaacc aaaccattgt gccgcagggc gcggatatgg tgttcgacta tatcgacgca
    16141 ttccgcgatc aggcaaaccg gctgaccgcc atcggcagcg tgatgctggt cgtaacctcg
    16201 ctgatgctga ttcggacgat agacaatgcg ttcaaccgca tctggcgggt taacacgcaa
    16261 cgcccctgga tgatgcagtt cctcgtttat tgggcgttgc tgactttcgg gcctttgtct
    16321 ttgggtgtgg gcatttcctt tatggtcggg tcggttcaag actccgtact ctcctccgga
    16381 gcgcaacaat gggcggacgc gttgaagacg gcggcaaggc tggctttcat gacgcttttg
    16441 ctgtgggggc tgtaccgctt cgtgcccaac cgcttcgtgc ccgcccggca ggcgtttgtc
    16501 ggagccttga ttacggcatt ctgcctggag acggcacgtt tcctgttcac ctggtatatg
    16561 ggcaatttcg acggctaccg ctcgatttac ggcgcatttg ccgccgtgcc gtttttcctg
    16621 ctgtggttaa acctgctgtg gacgctggtc ttgggcgggg cggtgctgac ttcgtcgctg
    16681 tcttattggc agggcgaggc cttccgcagg ggattcgact cgcgcggacg gtttgacgac
    16741 gtgttgaaaa tcctgctgct tctggatgcg gcgcaaaaag aaggccgaac cctgtccgtt
    16801 caggagttca gacggcatat caatatgggt tacgatgaat tgggcgagct tttggaaaag
    16861 ctggcgcggt acggctatat ctattccggc agacagggct gggttttgaa aacgggggcg
    16921 gattcgattg agttgagcga actcttcaag ctcttcgtgt accgcccgtt gcctgtggaa
    16981 agggatcatg tgaaccaagc tgtcgatgcg gtaatgacgc cgtgtttgca gactttaaac
    17041 atgacgctgg cggagtttga cgctcaggcg aaaaaacagc agcagtcttg agtatttttg
    17101 aaactgtatt tttatcctaa agacattttc ctatctgctg attccaccgt ttcctttctg
    17161 tgtgccgcca taatttttat aatagacaag ccattcaagt ttgcattgac tgctttttca
    17221 ttggcaatat ccaaatgact ggccgcttca tctaaaaata ggattttcgg ttcgcaatat
    17281 aaggcccgcg ccaatacgat acgttgtttt tgtccgcctg acagtgcgct gcccatatcg
    17341 ccgatcaagg tttcatagcc cataggcatg gcggagattt cttcgcgaat catagcaagg
    17401 caggcgcaat gttcgatttt tcctctatcc ggttctgtat cgaaaaaaca gatattctct
    17461 gcaattgagc cagcaaatgc aaatatagtg gattaaattt aaatcaggac aaggcggcga
    17521 agccgcagac agtacagata gtacggcaag gcgaggcaac gccgtaccgg tttaaattta
    17581 atccactata aaacatcgtc ctgcctgacc atcgcactca aattgcggat aaaacgtggc
    17641 ggtaagctgt aaatgtcgtg cccatttatc atgactttgc ctgattcggg aggtagattg
    17701 ccgcttaaaa tatccaaaag tgtcgattta ccgcagcccg atcgtccgat taacgcaagc
    17761 gattcaccac gtccgatctt gaagctgacg ttttgtaaaa catatggctc gttatcggca
    17821 taacggaaag aaacattttc cactgagatt tcgatgtcgt ctgaaatatc aggaatgcct
    17881 acatccggcg tagcttccga ttctgtttca ttcaatacgg tgtcagctaa ccgttccgca
    17941 tgaagtgaca gcattttaat ttgcacaaac tgatcgacca gcgagccaat acgtccttca
    18001 aactgtccct tataagccaa aaaagccatt agtacgccga cggtaaagac gccgtccaat
    18061 accatgcccg cagctaagta aataatcaaa atatttgcca aaccgaaaag cagcttgttt
    18121 gccaagccga accaaattcc cagtttctgc accgtcagtc ccgtattaac cgtatccacc
    18181 agcagcccca tccatgcaga atatcgttga ggacctttac caaattgctt gactgctcgg
    18241 ataccgcgta ccgtttccat aaaatagctg ctttgtttgg cagcatggat gatgttttcc
    18301 tccgtcgccc gtcgcaacgg ataataggct acccaacgga ctgcgatata aactaccagt
    18361 gtcgctgcaa ccaaacctgt cagtatcggg ctgtacacta tcattagcac aaaagtaaaa
    18421 acagccgtta ggctgtttaa aaccaacacg aaaaacgttg aagtcagagt tccctgaata
    18481 ctatccaccg ccccgaagcg cgataccaca tcgcccaaat gccgtttagc gaaataatct
    18541 gtaggcaaat ctatcaaacg tttgaaaacg tttgatttcc actgaacatt taacgtcgtt
    18601 gaaaaatgca tgcccaacca gccctgcatg acagacaccg tattttgtac cagaagtagc
    18661 aaggtaaagc ccaaagccag cgtcgctaac agattacgat cgcccgttac cactacatgg
    18721 tcgatgaccc attgcataaa aaacggcgac accaaagcaa acacttccat tgctgctgcc
    18781 aaagccaaaa gctgaaacaa tgtccgcccc agcccagaaa tcccgcgcaa catgggtagg
    18841 atgcggattt cctgcttttc ttcccctgcc tcgaaacgcg tgtttggcca cagttccaaa
    18901 gcaattcccg taaacttgcg cgatatttcc tccgtcttga ctttgcgtcg tcccgaagcc
    18961 ggatccatga cggcagcccc gtccgaagat accgattcca gcaccacaaa atgattcaaa
    19021 tcccaatgta gaatacaggg caggcgcaaa ctgcccaatt cgtctaaatc cagcctcaac
    19081 gcccgtcccg tcagccccat atcatcagca aaacgaacaa tatctgccaa attctcaccc
    19141 ttaagtgaca gacagtattt tgaacgcagt gcgcgcaaat ccgtatagaa accataaaat
    19201 ccggccacag ccgctagaca tgccaagcca cactccgcta cttctgtttg cagtataacg
    19261 ggcagctttt ttgtcaagcc caaagacagg ttttgcagat aatccataga tttccttgtt
    19321 gaatcagaaa agagagatgg gaagacggga atggtttgga aaggccgtct gaaaaggttt
    19381 cagacggcct gcagccccat attggctttc aatgcgaccg gttttcctcg cgtttcaaat
    19441 acagcagata cgcaagaaaa gacaaagccc ctacaggtcc tgcgacggta accgaaaaaa
    19501 acctgccttt gtaaaacaca ccgtcgaagt ttaaaaaata gcaaaggatg tcggtcagga
    19561 tgctgatggc aagataaatc agcacagcgg ctttccagtg tttcaggtaa tgtgcgaaat
    19621 ccatttcaaa ctcccgatca acagttgcac gggtcgcaat ggcagtcttc tccgcattgg
    19681 cagttgcgcc tgtcgatcat ttttccccat tttgcaccgg caaaaccgcc gatatgccca
    19741 cccaatgcag aaccgccctc agctcctacc catccgccgc ctgcgccgcc gatggcaatt
    19801 ccggcaggat ttccgcctgt taccaatgcg ccgcccgcca ttcccgtgaa tgctccggca
    19861 aacgacccta aagcgccgcc gaccttgctt ccgacccatt ctccggagac tctgcccctg
    19921 tgcccccaag taccttctgt gccgccgaaa acagcggtca tttcgttcat ggtcaattct
    19981 ctcatttcaa aactcctttt atcgtcaatc gaaaaattga aagggcagat accctatcct
    20041 tgcttttaca gacagagtat ctgtaaaagg gggtagtttc aggcagcttc agtgtttatg
    20101 tttttatgta gtgttttaca ggtcgtctga agaggtttca gacgactttt tatctttcag
    20161 cctcaagcct tacaacctgc ccgacatact ataaatcggc tccaataccc attcgtacag
    20221 ccgccgtttc tcgtgtagga tgtctgcttc cagcgtcatg ccgatttgca gcggtttttc
    20281 ctcaccgtat gcagtgatgg ttggtttgtc gggttttatt ttcacgagat aaacaggttc
    20341 gttgctcttc gccaaatcgg aggataccat gcccaatccc gacaattcct gtctgcccag
    20401 tgccgttttt gccactgata cgacactgcc ggaagcaagc ccgaatttct gatagggata
    20461 tgcctgataa cgtaggacaa ccttgtcttt cggcttgata aagcctgctg cactgctggg
    20521 gatatataga tgggcatata actcggtacg ttcgggaaca atgctcaaga gcagtttgga
    20581 aggatcaacc tgccgtccga cttcgacgtt cggtattgct atataacccg accgtcctgc
    20641 acggatgatt tgttcagagc gcatttcaaa atccaaaact tcttgagaaa tatcggcaat
    20701 ggtgcgttca agctggcttt gttctgtctc atgccgtttg gggaggctgg ccaatgtcag
    20761 attctgcgtg cggatttcct gaagcagccc ggcttcttct cggcggtagg catcaagttt
    20821 ggctttctgc tctaaaagct ctgcctcgac attcatcgtt tcttgttttg acactgcatc
    20881 attggcggat aggaaacgat atttccgcaa catttcttcc gcaagtctaa tgcgcctttt
    20941 ctggccgtct atctgttgcg aaatatggag tttctggttt tccaaacgtt cgacagttgc
    21001 tttaaggctg cgcgtttcat tctcgtgtat cagcttcaga cgacccagtt cctgttctgc
    21061 caacgttttc ttcaaaaccg cttccgtttt caactgctgc tgcacgctac ctcctgcgcc
    21121 gaaacgtgag gtcgaaagcg caaatagctt gtcgccagcc ttaacctttt ctccatcttc
    21181 cacgaatttc gctgtaattg tccccgtatc cggtgcatac accctgatta cgcccgatgc
    21241 aggtagaatt tgtccctcca ttgttgtctt tcgcgtatag ttaccgaata tcaaaaacag
    21301 gataatcagt aacgcagata tcgatgcaaa tgtcgtccac agggaaaatg acaacgggcg
    21361 tgtcagaatc actttacccg tcaggctggt ttggcgggca atggcgactt cagggcggaa
    21421 gaaaggttgc ttgggtctat tcataaaatt gaagttaaga aagtttcaga cgacccctag
    21481 agatcgtctg aacaatgaga aatatcagca gtaatctgta ccgtcagtgt agccgtttcc
    21541 tgatttatct gcttttgttg cgggagcagt taatccatgt tcaatctcaa agattggtct
    21601 tccgttataa ggaggtgcat taacggcatc atttacccaa tcacgagtca gattgtatac
    21661 accatttgca ccaatagcac cgaaaaaatt tttcggcagg aaatgaactg tcgctgcagc
    21721 agcaggtatt gcaacaaaat ccccccatgt gggacctcct ttggttgtgg cagcattagc
    21781 tacatttcca gctatattgt ctgttacagg acctccccct gaaaccagct tcaattcatg
    21841 aagttgaagt tcaatcattt ttatactcct tttcttggtt ggtattccta aaaattcggc
    21901 taacaaaaac atatggcaga tatattgaaa aaaaattcaa agtaccctga ataaaattca
    21961 aattccaact atattt
//
LOCUS       DAXFZM010000025        21937 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.025, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000025 DAXFZM010000000
VERSION     DAXFZM010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21937)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21937)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21937
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.025"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..454)
                     /locus_tag="ACFJAG_000830"
     CDS             complement(<1..454)
                     /locus_tag="ACFJAG_000830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HFC3980171.1"
                     /translation="MSSFIFPDNGFEWRNESLQKPPKGWYYVRESGADGILKATYQNI
                     ATVWQGDFHNAKQVLSAMKKKVRKPAAVRSDADIAALFHAHRMKQAQQSRILNMLAVE
                     IRPGFVLDNKRAPDIRAALLDVYGEADGKPFFLPLNLLLGFMGVHEWHK"
     gene            706..3168
                     /gene="lon"
                     /locus_tag="ACFJAG_000831"
     CDS             706..3168
                     /gene="lon"
                     /locus_tag="ACFJAG_000831"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HFC3980172.1"
                     /translation="MTQKEKHFEEYAALATLPLRDVVVYPHMVLPLFVGRPKSIAALE
                     NAITREEPVFLLAQTDAAVEEPVAADLYQTGTVAQVLQVLKLPDGTVKVLVEGLYRGR
                     VLTIEDTGGLFVSHIEAVVEEDTGGNTDLEAVRRTLLAQFEQYAKLNKKIPAEIIGSI
                     NGIAENSRLTDTVAAHLQLKLAQRQQILEIPEIGKRMEFLLAKLESELDIMQAEKRIR
                     GRVKRQMEKSQREYYLNEQIKAIHKELGEEDENGELDALEAGIKKAGMTKEAEEKCLS
                     ELKKLKMMPPMSAESTVVRNYIDTLLGLPWKKKSRVSKDIAKAGLVLDADHYGLEKVK
                     ERILEYLAVQKRMDKLKGPILCLVGPPGVGKTSLGESIAKATGRKYVRMALGGVRDES
                     EIRGHRRTYIGSMPGKILQNMAKAGVRNPLFLLDEIDKLGSDFRGDPASALLEVLDHE
                     QNNKFADHYAEVDYDLSDVMFIATSNSLNIPTPLLDRMEIIRLSGYTEDEKINIAMQY
                     LVPKQMKRNGVKEGELVVEESAVRDIIRYYTREAGVRSLDREIAKICRKVVMQITLNE
                     DKKRLSETKKTSKAKPRAVKVNEKNLHDYLGVRRFDYGVAESENRIGQVTGLAWTEVG
                     GELLTVEAAALPGKGMIQCTGQLGDVMKESVSAAWSVVRSRAESVGLAPDFYEKKDIH
                     VHVPEGATPKDGPSAGIAMTLAMVSAFTKIPVRADVAMTGEITLRGEVLPIGGLKEKL
                     LAALRGGIKHVLIPKDNVKDLEEIPENVKTGLTIHPVKWIDEVLALGLESRPESWAEP
                     SAAEAAAESASKPKPRSRAIKH"
     gene            3350..3619
                     /locus_tag="ACFJAG_000832"
     CDS             3350..3619
                     /locus_tag="ACFJAG_000832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007342959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HFC3980173.1"
                     /translation="MNKSELIEAIAQEADISKAAAQKALDATTNAVTNALKQGDTVTL
                     VGFGTFYVGERAERQGRNPKTGEPLTIAAAKTLKFRAGKALKDAL"
     gene            complement(3795..4229)
                     /locus_tag="ACFJAG_000833"
     CDS             complement(3795..4229)
                     /locus_tag="ACFJAG_000833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980174.1"
                     /translation="MTEPKHETPTEEQVAARKKAKAKIRTIRIWAWVILALLASTALL
                     SQCAMSKPQAKQKIVESCMKNIPFAEKWQNDLKARGLDADNTRLAVDYCKCMWEQPLD
                     GLSEKQISSFGKLGAQEQLDLLGGANAFETRDKQCVADLKAD"
     gene            complement(4222..5529)
                     /locus_tag="ACFJAG_000834"
     CDS             complement(4222..5529)
                     /locus_tag="ACFJAG_000834"
                     /EC_number="1.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004412 - homoserine dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HFC3980175.1"
                     /translation="MKPVNIGLLGLGTVGGGAAAVLRDNAEEISRRLGREIRISAMCD
                     LSEEKARQICPSAAFVKDPFELVARKDVDVVVELFGGTGIAKEAVLKAIENGKHIVTA
                     NKKLLAEYGNEIFPLAEKQNVIVQFEAAVAGGIPIIKALREGLAANRIKSIAGIINGT
                     SNFILSEMREKGSAFADVLKEAQALGYAEADPTFDIEGNDAGHKITIMSALAFGTPMN
                     FSACYLEGISKLDSRDIKYAEELGYRIKLLGITRKTGKGIELRVHPTLIPESRLLANV
                     DGVMNAVRVNADMVGETLYYGAGAGALPTASAVVADIIDIARLVEADTAHRVPHLAFQ
                     PAQVQAQTILPMDEITSSYYLRVQAKDEPGTLGQIAALLAQENVSIEALIQKGVIDQT
                     TAEIVILTHSTVEKHIKSAIAAIEALDCVEKPITMIRMESLHD"
     gene            5725..6096
                     /locus_tag="ACFJAG_000835"
     CDS             5725..6096
                     /locus_tag="ACFJAG_000835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mth938-like domain-containing protein"
                     /protein_id="HFC3980176.1"
                     /translation="MLFEENPIDGQFAEYECGAGGIRLAGQSFHKPVLVHKDSVCLPQ
                     CRTLSDLTPENLLSDIKPVDYPEILIIGTGAAQEFIHPKIMADFSRIGISVECMNTDS
                     AFRTLVFLHSEGRRAWAWLQP"
     gene            6173..8108
                     /locus_tag="ACFJAG_000836"
                     /pseudo
     CDS             6173..8108
                     /locus_tag="ACFJAG_000836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706256.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
     gene            8095..8490
                     /locus_tag="ACFJAG_000837"
     CDS             8095..8490
                     /locus_tag="ACFJAG_000837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4124 domain-containing protein"
                     /protein_id="HFC3980177.1"
                     /translation="MPSDKEARAGCLSLPANNGIIRTLPPPFYFTGINIRLFAALGLL
                     SLSGAAAQASIYHCNSNGKSVYTSDPSGSCADADLPKISSHQGGGYRLKIKKLSQEAK
                     IHTGNKKKNKKHAGKKNRQAAKAPKENQK"
     gene            8581..9093
                     /locus_tag="ACFJAG_000838"
     CDS             8581..9093
                     /locus_tag="ACFJAG_000838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980178.1"
                     /translation="MKSKLPLILINLSLISSPLGANAAKIYTCTINGETVYTTKPSKS
                     CHSTDLPPIGNYSSERYIPPQTPEPAPSPSNGGQAVKYKAPVKTVSKPAKSNTPPQQA
                     PVNNSRRSILEAELSNERKALTEAQKMLSQARLAKGGNINHQKINALQSNVLDRQQNI
                     QALQRELGRM"
     gene            complement(9469..9651)
                     /locus_tag="ACFJAG_000839"
     CDS             complement(9469..9651)
                     /locus_tag="ACFJAG_000839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980179.1"
                     /translation="MGVCPDARCSAAGIARQIGNGGGIHGTLAFSLLFLSLGHIGMVA
                     YHHIKGESVLPLFLLI"
     gene            9651..9986
                     /locus_tag="ACFJAG_000840"
     CDS             9651..9986
                     /locus_tag="ACFJAG_000840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017147061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980180.1"
                     /translation="MPNLVTAVLAGRFLRWRIPYPTHQTDNISSRILTARICWYESSA
                     QAEKAVAPKTVARINCLNFMMLLLLHKAFGIVKPAAYGFAAVAALQAVLQETLKHDHC
                     IKSCSNSAK"
     gene            complement(10023..10682)
                     /gene="ung"
                     /locus_tag="ACFJAG_000841"
     CDS             complement(10023..10682)
                     /gene="ung"
                     /locus_tag="ACFJAG_000841"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HFC3980181.1"
                     /translation="MDTWHDALGGEKQQPYFQEILNAVRQERLSGQIIYPPEADVFNA
                     FRLTAFDRVKVVILGQDPYHGVGQAHGLAFSVRQGVRIPPSLLNIYKELETDIEGFSI
                     PAHGCLTAWAEQGILLLNTVLTVRAGQAHSHALLGWERFTDTVIRQLATHRKHLVFML
                     WGGYAQQKGRLIDSQNHLILTAPHPSPLSAYRGFFGCRHFSQANSYLSQHGIEPINWK
                     L"
     gene            10763..11170
                     /locus_tag="ACFJAG_000842"
     CDS             10763..11170
                     /locus_tag="ACFJAG_000842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HFC3980182.1"
                     /translation="MTVWFVAAVAVLIIELLTGTVYLLVVSAALAGSGIAYGLTGSTP
                     AAVLTAALLSALGIWFVHAKTAVGKVETDSYQDLDTGKYAEILRYTGGNRYEVFYRGT
                     HWQAQNTGQEVFEPGTRALIVRKEGNLLIIANP"
     gene            11185..12132
                     /locus_tag="ACFJAG_000843"
     CDS             11185..12132
                     /locus_tag="ACFJAG_000843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stomatin-like protein"
                     /protein_id="HFC3980183.1"
                     /translation="MEFFIILLAAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGL
                     NILIPFIDRVAYRHSLKEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGSSN
                     YIMAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVSALDEAAGAWGVKVLRYEIKD
                     LVPPQEILRAMQAQITAEREKRARIAESEGRKIEQINLASGQREAEIQQSEGEAQAAV
                     NASNAEKIARINRAKGEAESLRLVAEANAEAIRQIAAALQTQGGADAVNLKIAEQYVA
                     AFNNLAKESNTLIMPANVADIGSLISAGMKIIDSSKTAK"
     gene            complement(12239..13309)
                     /locus_tag="ACFJAG_000844"
     CDS             complement(12239..13309)
                     /locus_tag="ACFJAG_000844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HFC3980184.1"
                     /translation="MYRRKGRGIKPWMGAGAAFAALVWLVYALGDTLTPFAVAAVLAY
                     VLDPLVEWLQKKGLNRASASMSVMVFSLILLLALLLIIVPMLVGQFNNLASRLPQLIG
                     FIQNTLLPWLKNTIGGYVEIDQASIIAWFQAHTGELSNALKAWFPVLMKQGGNIVSSI
                     GNLLLPPLLLYYFLLDWQRWSCGIAKLVPRRFAGAYTRITGNLNEVLGEFLRGQLLVM
                     LIMGLVYGLGLMLVGLDSGFAIGMVAGILVFVPYLGAFTGLLLATVAALLQFGSWNGI
                     LAVWAVFAVGQFLESFFITPKIVGDRIGLSPFWVIFSLMAFGELMGFVGMLAGLPLAA
                     VTLVLLREGAQKYFAGSFYRGR"
     gene            13494..13769
                     /locus_tag="ACFJAG_000845"
     CDS             13494..13769
                     /locus_tag="ACFJAG_000845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbeD family protein"
                     /protein_id="HFC3980185.1"
                     /translation="MTEQKNKASLIEFPCAFPLKVMGAVHPEFEQAVLDTVRLHAPDT
                     QAHHITTRPSSKGNYTGATVQVKVENQEQLDNIYRALTSHELVKVVL"
     gene            13771..14394
                     /gene="lipB"
                     /locus_tag="ACFJAG_000846"
     CDS             13771..14394
                     /gene="lipB"
                     /locus_tag="ACFJAG_000846"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033819 - lipoyl(octanoyl) transferase
                     activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HFC3980186.1"
                     /translation="MKIIHKGLVEYLPTFEAMKTFNAGRNADTEDELWVVEHPPVFTQ
                     GLAGKPEHLLIRDDIPVVQIDRGGQITYHGPGQLVVYTMIDFKRRKTSVRNIVSALEN
                     SIIATLAEYGIEAAADPKRPGIYVGERKIASLGLRIKNGSVYHGLALNVNMDLSPFTQ
                     INPCGYAGMEMTQIADFVQPCPAPDEVASKLTAHLETQLTPKADNNE"
     gene            14387..15370
                     /gene="lipA"
                     /locus_tag="ACFJAG_000847"
     CDS             14387..15370
                     /gene="lipA"
                     /locus_tag="ACFJAG_000847"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016992 - lipoate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009107 - lipoate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HFC3980187.1"
                     /translation="MSEIKTDDPKRGIKLRGADKTARIPIKVVPLQEKLKKPEWIRAK
                     LPSRKFFEIKDILREQKMHTVCEEASCPNIGECFSKGTATFMIMGDICTRRCPFCDVG
                     HGRPNMLDPDEPKNLAESVKAMNLRYVVITSVDRDDLRDGGAQHFADCIKAIRETSPN
                     TKIEILVPDFRGRLDIALKILAETPPDVMNHNLETHPSLYRKARPGANYQHSLDLLKR
                     YKEMMPHIPTKSGIMVGLGETDEDVREIMRDMRAHNIEMITIGQYLQPSDGHLPVLRY
                     VTPEQFKIFEKEAYELGFTNAAIGAMVRSSYHADEQAAEALRESHGGCGHH"
     gene            15845..16309
                     /gene="bfr"
                     /locus_tag="ACFJAG_000848"
     CDS             15845..16309
                     /gene="bfr"
                     /locus_tag="ACFJAG_000848"
                     /EC_number="1.16.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004322 - ferroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0008199 - ferric iron binding [Evidence
                     IEA];
                     GO_process: GO:0006879 - intracellular iron ion
                     homeostasis [Evidence IEA];
                     GO_process: GO:0006880 - intracellular sequestering of
                     iron ion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HFC3980188.1"
                     /translation="MQGNQAVVDYMNELLSGELAARDQYFIHSRLYSEWGYTKLFERL
                     NHEMEEETTHAEDFIRRILMLGGTPKMARAELNIGTDVVSCLKADLQTEYEVRDALKK
                     GIKLCEEAQDYVTRDLMVAQLKDTEEDHAHWLEQQLRLIELIGEGNYYQSQL"
     gene            16337..16810
                     /gene="bfr"
                     /locus_tag="ACFJAG_000849"
     CDS             16337..16810
                     /gene="bfr"
                     /locus_tag="ACFJAG_000849"
                     /EC_number="1.16.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004322 - ferroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0008199 - ferric iron binding [Evidence
                     IEA];
                     GO_process: GO:0006879 - intracellular iron ion
                     homeostasis [Evidence IEA];
                     GO_process: GO:0006880 - intracellular sequestering of
                     iron ion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HFC3980189.1"
                     /translation="MKGDRLVIRELNKNLGLLLVTINQYFLHARILKNWGFEELGEHF
                     FKQSIVEMKAADDLIERILFLEGLPNLQELGKLLIGESTEEIIACDLTKEQEKHEALL
                     AAIATAEAQQDYVSRDLLEKQKDTNEEHIDWLETQQELIGKIGLPNYLQTAAQED"
     gene            17138..17458
                     /locus_tag="ACFJAG_000850"
     CDS             17138..17458
                     /locus_tag="ACFJAG_000850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HFC3980190.1"
                     /translation="MMGNKLTLPAELPDEQDLRAVLAYNMRLFRVNKGWSQEELARQC
                     GLDRTYVSAVERKRWNIALSNIEKMAAALGVAAYQLLLPPQERLNLMTNSADTRQVPS
                     ESGI"
     gene            17507..20065
                     /gene="glnD"
                     /locus_tag="ACFJAG_000851"
     CDS             17507..20065
                     /gene="glnD"
                     /locus_tag="ACFJAG_000851"
                     /EC_number="2.7.7.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008773 - [protein-PII]
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0018177 - protein uridylylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="[protein-PII] uridylyltransferase"
                     /protein_id="HFC3980191.1"
                     /translation="MPENLSSALETFKQQRNAAEAHYLKANRVSVFFREYTAAVETLL
                     AALWAEHFQNSALCLMAVGGFGRGEPYPCSDVDLAVVSPAPLSDGIQEQIARFIQTLW
                     DCKLMPSVKSGSVDELCESVRDDITGDTAFLEARFLFGNRQTADELAEKMNVQRNVAA
                     FIEAKLVEMEHRHAKSQGSGAVLEPNIKSCPGGLRDIHTLLWIAKAQGLAANLPDLLK
                     QRILTRAEAGMLSHGYRRLAHIRIRLHLNAKRAEDRLLFDLQPQVAESMGYQDENRRR
                     QSEELMRVFYRAVKTVKQLGGILTPMLRSRVSSTPVRVTLRIDDDYIQVNNQIAARHT
                     DIFFRRPEHIFKIVEIMQQRNDITALEPQTLRAWWGATRKINRSFYQNSENRRRFAGF
                     FRSGNGLTQTLRFLNLYGVLGRYLPAWEKIVGLLQHDLFHIYPVDDHILAVVRNVRRL
                     ALDMHSHELPYASALMQSFEKQDILYLAAFFHDIAKGRGGDHAVQGIADARQFAADHF
                     LTEEESDLLAWLVENHLLMSAVAQKEDIQDPGVLDAFCKRVQTHERLSALYLLTISDI
                     RGTNPKLWNAWRASLLESLFHAAGRCLAGNDGNPHALFGRRRQEAADLLTRAAVPEKQ
                     QKKLWNALGSAYFARHQSREILWHAANLVHDFEPPIVRSRILPQSDSFQVMVFMPNGP
                     RLFARLCRIFSRHGFDILAARAFITEHDYILDTFIVQIPSQHAPEDYPDIQSALEAEL
                     NSFIHGHTVAETQSCNRRISRRSRYMPIAPSITITPEEDYPDRYSVEITAVNRPFLLA
                     DMAEVFFAHNVSLRYAKISTLDERVEDSFTVFSPDLKNPKIQSSLKQALLEQLA"
     gene            20212..21675
                     /gene="guaB"
                     /locus_tag="ACFJAG_000852"
     CDS             20212..21675
                     /gene="guaB"
                     /locus_tag="ACFJAG_000852"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003767939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003938 - IMP dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HFC3980192.1"
                     /translation="MRIVEKAYTFDDVLLVPAHSTVLPRDVKLQTKLTREITLNLPLL
                     SAAMDTVTEARLAISMAQEGGIGIIHKNMPPEMQARAVSKVKRHESGVVKDPVTVAPT
                     TLIREVLEMRAQRKRKMSGLPVVENGKVVGIVTNRDLRFENRVDLPVSAIMTPRERLV
                     TVPEGTSIDEARELMHTYKVERVLVLNEKDELKGLITIKDILKTTEFPNANKDSEGRL
                     RVGAAVGTGGDTDERVKALVEAGADVIVVDTAHGHSQGVIDRVRWVKETYPHIQVIGG
                     NIATAKAALDLVTVGADAVKVGIGPGSICTTRIVAGVGVPQLTAIHNVAEALKGTGVP
                     LIADGGIRFSGDIAKALAAGAYSVMLGGMFAGTEEAPGEIELYQGRSYKSYRGMGSLG
                     AMSQGSADRYFQDKTDSTDKYVPEGIEGRVPYKGPIVNIIHQLTGGLRSSMGYLGCAN
                     IAEMHEKAEFVEITSAGMSESHVHDVQITKEAPNYHR"
BASE COUNT         5827 a         6070 c         5352 g         4688 t
ORIGIN      
        1 tcttatgcca ctcatgcaca cccataaacc ccagcagcag attgagcggc agaaaaaacg
       61 gtttgccgtc cgcctctccg tacacgtcga gcaaagcggc gcgtatatcg ggcgcgcgtt
      121 tgttgtccaa cacgaaaccg gggcggattt caacggcaag catattcaga atacggctct
      181 gttgcgcctg cttcatacgg tgggcgtgga aaagggcggc gatatccgca tcggaacgga
      241 cggcggcagg tttgcggacc ttcttcttca ttgccgaaag cacctgtttg gcattgtgga
      301 aatcgccctg ccagacagtt gcaatatttt gataggtagc cttcaaaatg ccgtctgcac
      361 cgctttcgcg gacataatac caacctttgg gcggcttttg cagactttcg ttgcgccatt
      421 cgaacccgtt atcgggaaaa ataaaagaag acatgggata cctgcgtcat gttttgaaaa
      481 tagggcggca gaaccgcaaa ccatacggat ggtacagcaa ggagcggcaa cacagaactg
      541 tttttttgtt cccgccttgt ctttccaagc ccatgccgtc tgaagccgga atgtttcaga
      601 cggcatggca tcaaactcca taaataaacc gcgtatgctt gaaataatac tttcaacccc
      661 aatttacgcg gcaatccgta tcctgtcaga cacaagagag tatccatgac acaaaaagaa
      721 aagcattttg aggaatatgc tgctttggcg acccttcctt tacgggatgt cgtcgtttac
      781 ccgcatatgg ttctgccgct gttcgtcggc aggccgaaat ccatcgccgc actggaaaac
      841 gccattaccc gcgaggaacc ggttttcctg ttggcgcaaa ccgatgcggc ggtagaagaa
      901 ccggttgccg ccgacctgta tcagaccggt accgtcgcac aagtcctgca agtgttgaaa
      961 ctgcccgacg gcacggtaaa agtgctggtc gaagggctgt atcgcggacg tgttttgacc
     1021 atcgaagaca cgggcgggct gttcgtttct catatagagg cggtcgtgga agaagacacg
     1081 ggcggcaata ccgacctcga agccgtgcgc cgcaccctgt tggcgcagtt tgaacaatac
     1141 gccaaactca ataaaaaaat ccctgccgaa attatcggca gcatcaacgg cattgccgaa
     1201 aacagccggc taaccgatac ggtcgcagcg catttgcagt tgaaactggc gcaacgccaa
     1261 cagattttgg agattcccga aatcggcaaa cggatggaat tcctgctggc aaagctggaa
     1321 tccgaactcg acattatgca ggccgaaaaa cgcatacgcg gacgcgtcaa acgccaaatg
     1381 gaaaaatccc aacgcgaata ttatctgaac gaacagatta aagcgataca caaagaattg
     1441 ggcgaagaag acgaaaacgg cgaactggat gccttggagg caggcatcaa aaaggcgggt
     1501 atgaccaaag aagcggaaga aaaatgcctg tccgaactga aaaaactcaa aatgatgccg
     1561 ccgatgtctg ccgaatccac cgtcgtacgc aactacatcg acaccctgct cggactgccg
     1621 tggaagaaaa aatcccgcgt cagcaaagac atcgccaaag ccggactggt gctggatgcc
     1681 gaccactacg gcctggaaaa agtcaaagaa cggattttgg aatacctcgc cgtccaaaaa
     1741 cgtatggaca agctcaaagg tccgattctg tgtttggtcg gccctccggg cgtgggcaaa
     1801 acctctttgg gcgaatccat cgccaaagca acggggcgga aatatgtccg tatggccttg
     1861 ggcggcgtgc gcgacgaaag cgaaatccgc gggcaccgcc gtacctatat cggttctatg
     1921 cccggcaaga ttttgcagaa tatggcaaaa gcaggcgtaa gaaacccgtt gttcctgctc
     1981 gacgaaatcg acaaattggg cagcgacttt cggggcgatc ccgccagcgc gttgcttgaa
     2041 gtgctcgatc acgaacaaaa caacaagttc gccgatcatt atgccgaagt ggattacgat
     2101 ttgagcgacg tgatgtttat tgcgacttca aacagcctga atatcccgac cccgctgctt
     2161 gaccgtatgg aaatcatccg tctgtccggc tataccgaag acgagaaaat caatatcgcg
     2221 atgcagtatc tcgtaccgaa gcaaatgaaa cgcaacggcg tgaaagaagg cgaattggtg
     2281 gtcgaagaaa gcgcggtacg cgatattatc cgttattaca cccgagaggc gggcgtgcgt
     2341 tcgctcgacc gcgaaattgc caaaatctgc cgtaaggtgg tgatgcagat taccttgaac
     2401 gaagataaga agaggttgtc tgaaaccaag aaaaccagca aagccaagcc tagggcggtt
     2461 aaagtcaatg agaaaaacct acatgactac ttgggcgtgc gccgcttcga ttacggcgtt
     2521 gccgaaagtg aaaaccgcat cggacaggtt accggtttgg cttggacgga agtcggcggc
     2581 gaattgctga ctgtcgaagc cgcagcatta ccgggtaaag gcatgatcca gtgtaccggc
     2641 cagttgggcg atgtgatgaa ggaatctgta tccgctgcat ggtctgttgt ccgttcccgt
     2701 gcggaatcag taggtttggc tcctgatttt tacgagaaaa aagacattca tgtccatgtt
     2761 cccgaaggtg caacgccgaa agacggtccg agcgcaggca ttgctatgac tttggcgatg
     2821 gtgtccgcct ttaccaaaat tccggtgcgt gccgatgttg ccatgacggg cgaaattacc
     2881 ctgcgcggcg aagtcctgcc gatcggcggt ctgaaggaaa aactgttggc tgcgcttcgc
     2941 ggcggcatca aacacgtcct gattccgaaa gacaatgtca aagacttgga agaaatccct
     3001 gaaaacgtga aaaccggatt aaccatccat ccggtcaaat ggatagacga ggtattggct
     3061 ttgggtttgg aaagccggcc tgagtcttgg gcagaacctt ctgccgcgga agcggcggcg
     3121 gaatccgctt caaaaccgaa accccgcagc agggcaatca aacattgaaa cgcaggaaat
     3181 gtgttgtaaa aatgcggttt cgtcctgaaa gcctgtaaaa tagggcgatt ccgtattttt
     3241 tgcttgacac ggcaatttca gaattgctat aaagcgaaag ttgctcaagc agtacaaacc
     3301 ccgagtattc gggcatttca tcatttttta agacaggaag ggactgattg tgaacaagtc
     3361 tgaattgatc gaagcgattg ctcaagaagc cgatatttcc aaagccgccg cacaaaaagc
     3421 tttggatgcc actaccaacg cagtaaccaa cgccctgaaa caaggcgaca ccgttactct
     3481 ggtcggtttc ggtactttct acgtcggcga acgtgcggaa cgccaaggcc gcaaccccaa
     3541 aaccggcgag cctctgacca ttgccgccgc caaaacgctt aaattccgtg caggtaaagc
     3601 attgaaagac gcactgtaaa ctgtttttca gcaaaagccg attccttgaa gaatcggctt
     3661 tttgttttcc ccgccgaatc aggatagggg tttgcccgtc ggattcggat gaagggctgc
     3721 ccgtcaaacc cggatggaaa aatgccatct gaaacgcttt tccccgcgtt cagacggcat
     3781 tccagacctg aggttcaatc ggctttcaaa tccgcgacac attgtttgtc tcgagtttca
     3841 aacgcgtttg cgccgccgag caggtcaagc tgttcttgtg caccgagttt gccgaaggag
     3901 ctgatctgtt tctcgctcaa tccgtccaaa ggctgctccc acatacattt gcagtagtcg
     3961 acggcgagac gggtattgtc cgcatccaag ccgcgcgctt tcaaatcgtt ctgccatttt
     4021 tcagcaaacg gaatattttt catgcaagac tcgacaattt tctgttttgc ctgcggtttg
     4081 gacatcgcgc attgggagag cagggcggtt gaagcgagca acgccaaaat gacccacgcc
     4141 caaatgcgga tggtgcggat tttggctttt gcttttttgc gcgcggcaac ctgctcttcc
     4201 gtcggcgttt cgtgtttcgg ctcagtcatg caggctttcc atgcggatca tggtaatcgg
     4261 tttttccaca caatccagtg cttcgatggc tgcgattgcc gacttgatgt gtttttcgac
     4321 cgtgctgtgg gtcagaatca cgatttcggc agtggtctga tcgataacgc ctttttggat
     4381 taaggcttcg atggacacgt tttcttgtgc caacagcgcg gcgatttgcc ccagcgtgcc
     4441 cggttcgtct ttggcttgga cgcgcaggta gtagctgctg gtaatttcgt ccataggcag
     4501 gatggtttgc gcttggactt gggcgggttg gaacgccaga tgcggtacgc ggtgggcggt
     4561 gtcggcttca accaggcggg cgatgtcgat gatatcggca accacggcgg aagcggtcgg
     4621 caatgcgccc gcgcccgcgc cgtaatataa ggtttcgccg accatatcgg cgttgacgcg
     4681 cacggcgttc atcacgccgt cgacgtttgc caagaggcgg ctttcgggaa tcagggtcgg
     4741 atggacgcgc aattcgatgc ctttgccggt tttgcgggtg atgcccaaca gtttgatgcg
     4801 gtagccgagt tcttcggcgt atttgatgtc gcggctgtcg agtttgctga tgccttcgag
     4861 atagcaggcg gagaagttca tcggcgtacc gaatgccagc gcgctcatga tggtgatttt
     4921 atggcctgcg tcgttgcctt cgatgtcgaa ggtcgggtcg gcttcggcat aacccaatgc
     4981 ctgcgcttct ttcaatacgt cggcaaacgc gctgcctttt tcgcgcattt cggagaggat
     5041 gaagttgctg gtgccgttaa taatgccggc gatggattta atcctgtttg ccgccaaacc
     5101 ttcgcgcagg gctttgatga ttgggatacc gcccgctact gccgcttcaa attggacgat
     5161 gacgttttgt ttttccgcca gcgggaagat ttcgttgccg tattcggcga gcagtttttt
     5221 gttggcggta acgatgtgtt tgccgttttc aatggctttc aacaccgctt ctttggcaat
     5281 gcccgtgccg ccgaacaatt cgacgacgac atcgacgtct ttacgcgcga ccagttcgaa
     5341 cggatctttg acaaaggcgg cggacgggca gatttggcgg gctttttctt cgcttaagtc
     5401 gcacatggca gaaatacgga tttcgcgccc caagcggcgg gaaatttcct ctgcgttgtc
     5461 ccgcaacacg gcagccgcac cgccgccgac cgtacctaag cctaaaagac cgatgtttac
     5521 tggcttcatt gtgtctcctt gtaagccgac tgaaatgtaa atattgaaag acgaaaatat
     5581 ccgctgccgg tataattgtg ccgcactttg aatcaaatgc cgtctgaaat cggcaggcgc
     5641 gtcagatgaa atctgccaat cctacattaa ttcgcctgat tttgcacccc tttcggtgca
     5701 gatgatgcag caacggggta aaaaatgttg tttgaagaaa atccgataga cggacagttt
     5761 gcagaatatg aatgcggcgc gggcggaatc cggctggcgg ggcaaagttt ccataaaccc
     5821 gtgcttgtac ataaggattc ggtctgcctg ccgcaatgcc gaaccttgtc cgacctgact
     5881 ccggaaaacc tgttgtccga catcaaacct gttgactatc cggaaatatt gattatcggg
     5941 acgggcgcgg ctcaggagtt tatccatccc aaaatcatgg cggatttttc ccgaatcgga
     6001 atcagcgtgg aatgcatgaa taccgattcg gcattcagga cattggtttt cctgcactcg
     6061 gaagggcgca gggcttgggc ttggcttcaa ccgtaaattt cccgtttcag acggcatcgg
     6121 cactgacttt caggtaaaat acgggctttt cccgcccgac gatgtttccg ttatgattga
     6181 aatcaaaaac ctcaccctgc aacgcggttt gaaagtcctg ctcgacaagg cttccgctgc
     6241 cgtcaatccc ggtcagcgcg tcggtttgat cggtaagaac gggacgggca aatccagcct
     6301 gtttgcctta atcaagggcg aaatcactca ggacggcggc gatatctcga ttccgaaaaa
     6361 ctggcggctc gcttccgttt cccaagaaac gcccgatttg gatatttccg ctttggatta
     6421 cgttttgcag ggcgatgccg agttgcaggc ttttcagacg gcattgaggc aggcggaagt
     6481 gcaaaatgac ggcatgaagc aggcggaata tcatgccaaa ttggaagaaa tcgacgccta
     6541 taccgcgccg gcccgcgcgg caaaattgtt gaacgggctg ggtttttcgc aagaagaaca
     6601 cagccgtccc gtcaaatcct tttccggcgg ctggcgtatg cgcctgaatc ttgcgcaagc
     6661 cctgatttgc cgcgctgatt tgctcttgct tgacgaaccg accaaccatt tggatttgga
     6721 aactgtcttg tggttggaaa accaccttgc ctctttaccc tgcacgcaaa tcatcatttc
     6781 ccacgaccgt gatttcctca atgcggccac cacccaaacc attgaattgt cgcagcaaaa
     6841 gctcacgcaa tacagcggca attacgattt ttaccaaacc gaacgcgcgc agcgtctggc
     6901 gcaacaacaa gccgcatatg tcaaacagca ggcgcaaatc aaacatctgc aatcctttat
     6961 cgaccgcttc aaagccaaag ccactaaagc cgttcaagct caaagccgca tgaaggcgtt
     7021 ggcgaagctc gaacgcatcg ctcccgcaca tctggacagc gagttttcct ttgagtttta
     7081 caatcccgac catctgccca atcctttgct gaagctggag cacgctgatt tgggttacga
     7141 aggtaaaacc gtcctgcatg acattaccct gtcgctggaa agcggcgcac gaaagcggcg
     7201 cacgttacgg gctattgggt gtcaacggca gcggtaaatc tacgtttatc aaagctttgg
     7261 caggaaaaat cgatttactc tccggcagca tcgtccgttc cgaaaaactt aatatcggct
     7321 atttcgccca acaccagctt gacaccatcc gcgccgacca aagccctgtt tggcatatac
     7381 agcagctttc tcccgaagta cgcgaacaag aaatccgaaa tttcctcggc ggcttcaact
     7441 ttgtcggcga tatggcgttg cagaaaaccg aacctttttc cggcggagaa aaagcccgcc
     7501 ttgcccttgc catgattatc tggcaaaagc cgaacctgct gctgcttgac gaaccgacca
     7561 accatctgga tttggatatg cgccacgcct taacgctcgc gttgcaaagt ttccaaggtg
     7621 cattaatcgt cgtatcgcac gaccgcagcc tgcttgaagc cacgaccgac agtttcctct
     7681 tgatagacaa aggtcgtctg aaaaactttg acggcgattt gaacgattac cgccaatggc
     7741 gcttggcaca ggaaaacgcc gcaaccgcgc cagccgcttc cactcaaagc caaaaccgca
     7801 aggataccaa gcgtatcgaa gcgcaaatcc gtcaagaaaa agcccgacgc agtaagccga
     7861 tacaacagaa aatcgacaaa gccgaaaaag aaatggtgca gctttctgaa attcagacgg
     7921 gatgcgaagc atttttaaca caagaagacg cttaccttga agcaaacaaa gaaaaattgc
     7981 aaaatacctt atccgagctg gcaaaagtca aaacacagct tgcccaaatc gaagaaactt
     8041 ggctggcttg tcaagaagaa ttggaacgga ttgaaactga aatcgagaaa cagtttgccg
     8101 agcgataaag aagcgcgggc agggtgctta tctttgcctg ccaataacgg tataattcgg
     8161 acgttaccac cgccttttta ctttaccggt ataaacatca gactttttgc cgccttgggt
     8221 ctcctgtccc tttccggcgc ggcggcgcaa gcctccatat accattgcaa ctcaaatggc
     8281 aaaagcgtat atacatcaga cccgtcagga tcgtgtgccg atgctgattt acctaaaatc
     8341 agcagccatc agggaggcgg ataccgcctg aaaattaaaa aacttagtca agaagccaaa
     8401 atacacacag gaaacaaaaa gaaaaacaaa aaacatgccg ggaaaaagaa cagacaggct
     8461 gccaaagccc cgaaggaaaa tcaaaaataa acaaccgaaa agaaaagccc ataaaacgcc
     8521 aagaaaacct tacaaaaaat cctcaaaaaa tcaaattatt atccgaatat caaacacatt
     8581 atgaaatcaa aactcccctt aatcctaatc aacctttccc tgatttcaag cccattgggt
     8641 gcgaatgcgg ccaaaatcta tacctgcaca atcaacggag aaaccgttta caccaccaag
     8701 ccgtctaaaa gctgccactc aaccgatttg cccccaatcg gcaactacag cagcgaacgc
     8761 tatatcccgc cccaaactcc cgaaccggca ccatcaccgt caaacggcgg acaggctgtc
     8821 aaatataaag ccccggtcaa aacagtatcc aagccggcaa aatccaatac gccgcctcaa
     8881 caagcacctg taaataacag cagacgctcc attctcgaag cagaattaag caatgaacgc
     8941 aaagccctga ctgaagccca aaaaatgtta tcacaagcac gtctggcaaa aggcggcaac
     9001 atcaaccatc aaaaaatcaa cgcattgcaa agcaatgttt tggacagaca gcaaaatatc
     9061 caagcactgc aaagagaatt gggacgtatg taaggccgtg ttttcaaatc gaccgttcca
     9121 aggatttgac agaagaaatg atgaaaaagc aggagaattt ttgggataag ttgggcgatt
     9181 tactgtttgc gcccgttgat ataatgtttt ggattaaaaa agtatgggcg gcatatcctg
     9241 tgtgtcggct gcctgtaatc gtattgaagg tcaacgtatt ccccaatacc ggctacacgt
     9301 acaactgttt ccgatagttc gcataatgta tattatgtta aatttataat ggattgaata
     9361 gatattttta caatctcatt caaaactcag acacttaaaa aatttaatca gaacaaataa
     9421 aaaagcaaac aaaaatatcc atctttcaaa ctcatatttt gcaataacct agataagcaa
     9481 gaacaggggc agaacggatt cgcctttgat gtggtggtag gcaaccattc caatatgtcc
     9541 cagcgacaaa aacagcaatg aaaatgccag cgtgccgtga attcctccgc cattgccgat
     9601 ttgacgggca atgcctgcgg cggaacagcg agcatcaggg catacgccca atgcccaatt
     9661 tggtgacggc ggtgttggcg gggcggtttt tacgttggcg gattccctac cctacgcacc
     9721 aaacagacaa tatcagcagc aggattctga ctgcacggat atgttggtat gaatcgtccg
     9781 cccaagcgga aaaggctgtc gcgcccaaaa cagtggcaag aataaattgc ttgaatttca
     9841 tgatgttgct tcttttgcac aaagcgttcg gaatagtgaa gcccgcagcc tatggctttg
     9901 cggcagtcgc agctttacaa gcggtattgc aggaaacctt aaaacacgat cattgcatca
     9961 agagctgttc gaattccgcc aaatgaacct gacacgcaaa ctttgacgct tgaatacggc
    10021 attcatagct tccagtttat cggttcgata ccgtgttgac tcaaatagct gtttgcctgt
    10081 gaaaaatggc ggcagccaaa aaaaccgcga tatgccgaca gaggagacgg atgaggcgcg
    10141 gtcagtatca aatgattttg actgtctatc agcctccctt tttgttgtgc atacccaccc
    10201 cacaacatga agacaaggtg cttgcggtgt gtcgcaagct gcctgatgac ggtatcggta
    10261 aagcgttccc agcctaaaag ggcgtgcgaa tgcgcctgtc ctgcacgcac cgtcaaaacc
    10321 gtgttcagaa gcaatatgcc ctgctccgcc cacgctgtca ggcagccgtg cgcgggaatg
    10381 gaaaagcctt cgatgtcggt ttccaattct ttgtaaatat tgagtaaaga cggcggtatg
    10441 cggacaccct gccggacgga aaatgccaaa ccgtgcgcct gccctacccc gtgatacgga
    10501 tcttgtccga gaatgacgac tttgacccgg tcgaacgctg tcagccggaa tgcgttgaac
    10561 acatcggcct ccggcggata gataatttgc cccgacaaac gttcctgcct gaccgcattt
    10621 aaaatttcct gaaaatacgg ctgctgtttt tcgccgccga gtgcatcgtg ccaagtgtcc
    10681 atatctgccc tatcctttca aattcggcta tactgctgat attgcgttat tttgtcaaac
    10741 gacgcgcttt gtggggaaat gtatgactgt atggtttgtt gccgctgttg ccgtcttaat
    10801 catcgaatta ttgacgggaa cggtttatct tttggttgtc agcgcggctt tggcgggttc
    10861 gggcattgcc tacgggctga ctggcagcac gcctgccgcc gtcttgaccg ccgcactgct
    10921 ttccgcgctg ggcatttggt tcgtacatgc caaaaccgcc gtgggaaaag ttgaaacgga
    10981 ttcatatcag gatttggata ccggaaaata tgccgaaatc ctccgataca caggcggcaa
    11041 ccgttacgaa gttttttatc gcggtacgca ctggcaggcg caaaatacgg ggcaggaagt
    11101 gtttgaaccg ggaacgcgcg ccctcatcgt ccgcaaagaa ggtaaccttc ttatcatcgc
    11161 aaacccttaa cactcggagg aattatggaa tttttcatta tcttgttggc agccgtcgcc
    11221 gttttcggct tcaaatcctt tgtcgtcatc ccccagcagg aagtccacgt tgtcgaaagg
    11281 ctcgggcgtt tccatcgcgc cctgacggcc ggtttgaata ttttgattcc ctttatcgac
    11341 cgcgtcgcct accgccattc gctgaaagaa atccctttag acgtacccag ccaggtctgc
    11401 atcacgcgcg ataatacgca attgactgtt gacggcatca tctatttcca agtaaccgat
    11461 cccaaactcg cctcatacgg ttcgagcaac tacattatgg caattaccca gcttgcccaa
    11521 acgacgctgc gttccgttat cgggcgtatg gagttggaca aaacgtttga agaacgcgac
    11581 gaaatcaaca gtaccgtcgt ctccgccctc gatgaagccg ccggggcttg gggtgtgaaa
    11641 gtcctccgtt acgaaatcaa ggatttggtt ccgccgcaag aaatccttcg cgcaatgcag
    11701 gcacaaatta ccgccgaacg cgaaaaacgc gcccgtattg ccgaatccga aggccgtaaa
    11761 atcgaacaaa tcaaccttgc cagtggtcag cgtgaagccg aaatccaaca atccgaaggc
    11821 gaggctcagg ctgcggtcaa tgcgtccaat gccgagaaaa tcgcccgcat caaccgcgcc
    11881 aaaggcgaag cggaatccct gcgccttgtt gccgaagcca atgccgaagc catccgtcaa
    11941 attgccgccg cccttcaaac ccaaggcggg gcggatgcgg tcaatctgaa gattgcggaa
    12001 caatacgtag ccgcgttcaa caatcttgcc aaagaaagca atacgctgat tatgcccgcc
    12061 aatgttgccg acatcggcag cctgatttct gccggcatga aaattatcga cagcagcaaa
    12121 accgccaaat aagccgtgat gaaaataccg tctgaagctc tgttttcggg tttcagacgg
    12181 tatttttatt taaacccgaa cagggttgta ttccgcttca aatatgtttc ggaaccgtct
    12241 acctgccccg gtaaaaactg ccggcaaaat atttctgcgc gccctcgcga agcaagacca
    12301 aggttacggc ggccaaaggc aatccggcca acattccgac aaagcccatc agctctccga
    12361 acgccatcag cgaaaagata acccaaaacg gcgacaggcc gatacggtct cctacaattt
    12421 tcggcgtaat gaaaaaactt tcgagaaact gaccgacggc aaaaaccgcc caaacagcca
    12481 agattccgtt ccacgaaccg aactggagca aggctgcaac agtggcaagc agcaatcccg
    12541 taaacgcacc caaatagggg acaaacacca aaataccggc aaccataccg atggcaaatc
    12601 ccgaatccag tccgactagc atcaatccca aaccgtaaac caagcccata atcagcatca
    12661 ccagaagctg accgcgcaaa aattcgccca atacctcgtt caaattaccc gtaatgcgcg
    12721 tataagcacc ggcaaaacgc ctcggaacca gtttggcgat gccgcacgac caccgctgcc
    12781 aatccagcag gaaatagtaa agcagcaagg gcggcagcag caggttgccg atactgctga
    12841 caatattgcc gccctgtttc atcaaaacgg gaaaccacgc cttaagcgcg ttgctcaact
    12901 cgcccgtatg cgcctgaaac cacgcaataa tagatgcctg atcgatttcc acatatccgc
    12961 cgattgtatt tttcaaccac ggcagcagcg tgttctgtat aaaaccgatt aattggggca
    13021 ggcgagatgc caaattattg aactgcccga ccagcatagg gacaataatc aacaataatg
    13081 ccaacaacaa aatcaaggaa aacaccatca cagacatcga agcggatgca cggttcaaac
    13141 cctttttctg caaccattcg accaaagggt ccaacacata cgccagcacc gccgcaaccg
    13201 caaacggagt caaagtatcg ccgagcgcgt aaaccagcca gaccaaggcg gcaaacgccg
    13261 cgccggcacc catccacggc ttgatgcccc gtccttttct ccgatacata aaatccaccc
    13321 ttccgaaaat aatattgcgc gccagtatag cagaaccgcc gcgccgtcaa aaaagcctcc
    13381 gccttcccga tagcctgtta tcgtggttta ggctaaaata ctgcacatcc gatgccctct
    13441 gaaaggcaaa cccgccttca gacggcatac cgtacacgat aaggcagcac atcatgaccg
    13501 aacaaaaaaa caaagcatcc ctcatcgaat ttccctgcgc cttcccattg aaagtgatgg
    13561 gcgcggtgca tcccgagttc gagcaggcgg tattggacac cgtccgcctt cacgcccccg
    13621 acacgcaggc gcaccacatc accacgcgtc cgagcagcaa aggcaactat accggtgcca
    13681 ccgttcaggt aaaggttgaa aaccaagaac aattggacaa catctaccgc gcgctgactt
    13741 cgcacgaact ggtcaaagtg gtactttgag atgaaaatca tacacaaagg tttggtcgaa
    13801 tatctgccga cttttgaagc gatgaaaacc tttaatgccg gacggaatgc agacaccgaa
    13861 gacgaattgt gggtcgtcga acacccgccc gtctttacgc aaggactggc gggaaaaccc
    13921 gagcacctgc tgattaggga cgacatcccc gtcgtccaaa tcgaccgggg cgggcagatt
    13981 acctatcacg ggcccgggca attggtcgtt tatacgatga ttgatttcaa acggcgcaaa
    14041 accagcgtcc gcaacatcgt ttccgcgctt gaaaacagca tcatcgccac attggcggaa
    14101 tacggcatcg aagcggcggc agatcccaaa cgccccggca tttacgtcgg cgaacgcaaa
    14161 atcgcctcac tggggctgcg tatcaaaaac ggttccgtct atcacggact cgcactcaac
    14221 gtcaatatgg atttaagccc gtttacccaa atcaacccct gcggctacgc cggtatggaa
    14281 atgacgcaaa tcgcggattt tgtccaaccc tgccccgcgc cggacgaagt cgcctccaaa
    14341 ctcaccgcac accttgaaac acaactcaca ccgaaagcag acaacaatga gtgaaatcaa
    14401 aaccgacgac cccaaacgcg gcatcaaact cagaggcgcg gacaaaaccg cccgcatccc
    14461 catcaaagtc gtcccccttc aggaaaaact gaaaaagccc gaatggatac gcgccaaact
    14521 cccatcgcgc aaattctttg aaatcaaaga cattttgcgc gaacaaaaga tgcacaccgt
    14581 ttgcgaggaa gcctcctgcc ccaacatcgg cgaatgcttc agcaaaggca cggcgacctt
    14641 catgattatg ggcgacatct gcacccgccg ctgcccgttc tgcgacgtgg gacacggccg
    14701 tccgaatatg ctcgaccccg acgagccgaa aaacctcgca gaatccgtca aagccatgaa
    14761 cctgcgttac gtcgtcatca cctcggttga ccgcgacgac ctgcgcgacg gcggcgccca
    14821 acacttcgcc gactgcatca aagccatccg cgaaaccagc ccgaacacca aaatcgaaat
    14881 cctcgtcccc gacttccgag gccgcttgga catcgcactg aaaatccttg ccgaaacccc
    14941 gcccgacgtg atgaaccaca acttggaaac ccatccgagc ctgtacagaa aagcccgtcc
    15001 cggtgccaat tatcaacatt ctttagactt attaaaacgt tataaagaaa tgatgccgca
    15061 tatcccgacc aaatccggca ttatggtagg cttgggcgaa acagacgaag acgtgcgtga
    15121 aattatgcgc gatatgcggg cgcacaatat cgagatgatt accatcggac agtacctcca
    15181 gccttcagac ggacacttgc ctgtcttgcg ctacgttaca cccgaacaat tcaaaatatt
    15241 tgaaaaagaa gcatacgaac tgggctttac caatgccgcc atcggcgcga tggtacgttc
    15301 aagttaccat gccgacgaac aggcggcgga agccttacgc gaaagccacg gcggttgcgg
    15361 gcatcattaa actcggaaca ccgttccgaa gtaaaaaata atttcctacg ctgctgtctg
    15421 ccgccttgtt tgatgtaaac aacatcaatt tgaattgtcc atgccgtctg aaagtccttc
    15481 agacggcata atttattccc aaaatccgat aatctcaaaa gaatctgtcg gttaatgaga
    15541 aagattcatt ataaattttg ataaaaaacc gtgctctatt tgttttttgc tatggttaac
    15601 aagtgtaaat gttctttatt gatgagatgg attcttagtt ttagcagcaa aaaaaaccga
    15661 taagaaacag catactgatt tggaaggcat cggggaatac gccctattta ttttgataat
    15721 tgtttgtatt ttaaatagaa aatttgtcat gccgacagct tttgcataca atgcacgcat
    15781 cccgaacagc gttacagaac gccgtttaac cgcacgaaac ccaaattaag aaaagagaga
    15841 tattatgcaa ggcaatcaag ctgttgttga ttacatgaac gaattgctgt ccggcgagct
    15901 ggcggcacgc gaccaatact tcatccactc ccgcctctac tccgaatggg gctacaccaa
    15961 actttttgaa cgtctcaatc acgagatgga agaagaaacc acacacgccg aagacttcat
    16021 ccgacgcatc ctgatgctgg gcggtacgcc gaaaatggca cgcgccgaac tgaatatcgg
    16081 cacggacgtg gtttcctgcc tcaaagccga cctgcaaacc gaatacgaag tgcgcgacgc
    16141 tttgaaaaaa ggcatcaaac tgtgcgaaga ggctcaagac tatgttacgc gcgacctgat
    16201 ggttgcccaa ctgaaagaca ccgaagaaga ccacgcacac tggttggaac agcagctgcg
    16261 cctgatcgag ctgattggcg aaggcaacta ctaccaaagc caactgtaat ccgtattagg
    16321 aataaaagga gtccgtatga aaggcgaccg tttggttatc cgcgagctga acaaaaactt
    16381 aggcttgctg ctggtaacca ttaaccaata tttccttcac gcccgtattt tgaaaaactg
    16441 gggctttgaa gaactgggcg aacatttctt caaacaatca atcgtagaaa tgaaagctgc
    16501 cgacgatttg attgaacgca tcctcttcct tgagggattg cccaatttgc aagagctggg
    16561 caagcttctg atcggtgaat ctaccgaaga aatcatcgcc tgcgatttga ccaaagaaca
    16621 ggaaaaacac gaagccctgc ttgccgccat cgccacagca gaagcgcaac aggattatgt
    16681 cagccgtgat ttgttggaaa aacaaaaaga tactaacgaa gaacacatcg actggctcga
    16741 aacccagcag gaactgatcg gcaaaatcgg tttgccgaac tacctgcaaa cagcggcgca
    16801 agaggactaa aacacaaacc actgccaaat acagcagtcc cctgcatcat cagacggcat
    16861 atccgtataa acgggtatgc cgtttttctt tgccggttta cgaataaaat ctaaattgat
    16921 ttgaatcaat actcgataac ggtttttgtt tgataatacc gatatgaaat ctagattgtt
    16981 tgtttgctgt ttcccaatcc gtcttgattt tacctctttc ctcttgatgt gtgtgtgtgt
    17041 ttgggtgtgg ctgccgccac cccttttttt tggcttttat gtgaagtaaa atccgtaaca
    17101 gcaaatactt aacttttaac catttatccg gaaacaaatg atgggcaaca aattgactct
    17161 gcctgccgaa ttgcctgacg aacaggattt gcgggcggta ttggcataca atatgcggct
    17221 tttccgcgtg aacaagggtt ggtcgcaaga ggaattggcg cggcaatgcg gtttggacag
    17281 gacttatgtg tcggcagtcg agcgcaaacg ctggaacatt gccctgtcga atatcgaaaa
    17341 aatggcggcg gctttgggcg tggcggcgta tcagttgctg ctgccgccgc aggaacggtt
    17401 gaacctgatg accaattccg ccgatacccg acaagtgccg tctgaaagcg gtatttgacc
    17461 gccgaaccat ccgcctccct ttttcccgcc aatcgaaaga ataaaaatgc ctgaaaacct
    17521 gtcttcagca ctggaaacct tcaaacagca gcgcaatgcc gccgaagcgc attatttgaa
    17581 agccaaccgc gtgtcggtat ttttcagaga atacacggcg gcagtcgaaa ccttgctggc
    17641 ggcattgtgg gcagaacatt ttcaaaacag cgcgttatgc ctgatggcgg taggcggctt
    17701 cgggcgcggc gaaccgtatc cctgttcgga tgtggatttg gcggttgtct cccctgcccc
    17761 gctttcagac ggcattcagg aacagattgc ccgatttatc caaactctgt gggattgcaa
    17821 actaatgccg tctgtaaaaa gcggcagcgt tgacgaactg tgcgaaagcg tgcgcgacga
    17881 tattacgggg gacacagcgt ttttagaggc taggtttttg tttggcaacc gccaaacagc
    17941 agacgaattg gcggaaaaaa tgaacgtgca acgcaatgta gcggcattta tcgaagcaaa
    18001 attggtggag atggaacacc gccacgccaa atcgcaaggt tcgggggcgg tgttggagcc
    18061 gaatatcaaa agctgtccgg gcggtctgcg cgacatccac accctgcttt ggatagcgaa
    18121 ggcgcaaggc ttggcggcca acctgcccga cctgctcaaa cagcggattt tgacacgtgc
    18181 cgaagccggt atgctttcgc acggctaccg ccgcctcgcc cacatccgca tccggctgca
    18241 tttaaacgcc aagcgcgccg aagaccgcct gcttttcgat ttgcagccgc aagttgccga
    18301 aagtatgggt tatcaagatg aaaaccgccg ccgtcaaagc gaagaactga tgcgcgtgtt
    18361 ttaccgtgcg gtcaaaaccg tcaaacaact gggcggcatc ctcacgccca tgctgcgaag
    18421 ccgcgtttcc tccacgccgg tgcgcgttac cctgcggatt gacgacgact acatccaagt
    18481 caacaaccaa atcgccgcgc ggcacaccga tatttttttc agacggcccg aacacatttt
    18541 caaaatcgtc gaaatcatgc agcagcgcaa cgacattact gcgctcgaac cgcaaaccct
    18601 gcgcgcatgg tggggggcga cgcgcaaaat caaccgcagc ttctaccaaa attctgaaaa
    18661 ccgtcgccgc ttcgccggtt ttttccgcag cggcaacgga ctgacccaaa ccctgcgctt
    18721 tctcaacctc tacggcgtgt tgggccgcta tctgcccgcg tgggaaaaaa tcgtcggcct
    18781 gcttcaacac gacttgttcc acatctatcc cgtggacgac cacatccttg ccgtcgtccg
    18841 caacgtccgc cgccttgccc tagatatgca cagccatgag ctgccctacg cctccgcgct
    18901 gatgcagtcc tttgaaaaac aagacatcct ctaccttgcc gccttcttcc acgacatcgc
    18961 caaaggacgc ggcggcgacc atgccgtaca aggcatcgca gacgcgcgcc aatttgccgc
    19021 cgaccacttc ctgaccgaag aagaaagcga cctgctcgcc tggctggttg aaaaccacct
    19081 ccttatgtct gccgtcgccc aaaaagaaga catccaagac cccggcgtac tcgatgcctt
    19141 ctgcaaacgc gtccaaaccc acgaacgcct cagcgcgctc tacctcctga ccatttccga
    19201 catacgcggc accaatccca agctgtggaa cgcctggcgc gccagcctgc tggaaagcct
    19261 gttccacgcc gccggacgct gcctcgcagg caacgacggc aacccgcacg ccctcttcgg
    19321 ccgccgccgg caggaagccg ccgacttact tacccgcgcc gccgtccccg aaaaacagca
    19381 gaaaaaacta tggaacgcgc tcggttccgc ctatttcgcc cgccatcagt cccgcgaaat
    19441 cctgtggcac gccgccaacc tcgtacacga ctttgaaccc cccatcgtcc gcagccgcat
    19501 cctaccccaa agcgacagct ttcaagtgat ggtctttatg cccaacggcc cgcgcctgtt
    19561 cgcccgcctc tgccgcatct tcagccgcca cggcttcgat atcctcgccg cccgcgcctt
    19621 tatcaccgaa cacgactaca tcctcgacac cttcatcgtg caaatcccct cgcagcacgc
    19681 ccccgaagac taccccgaca tccaaagcgc gctcgaagcc gaactcaaca gctttatcca
    19741 cggacacacc gttgccgaaa cccaaagctg caaccgccgc atcagccgcc gcagccgcta
    19801 tatgcctatt gcgccaagca tcaccatcac ccccgaagaa gactatccgg accggtattc
    19861 cgtcgaaatc accgccgtca accgcccctt cctgctcgcc gacatggcgg aagtcttctt
    19921 cgcccacaac gtcagcctgc gctacgccaa aatctccacg ttggacgaac gcgtcgaaga
    19981 cagctttacc gtcttcagcc ccgacttgaa aaacccaaaa atccagtcct cattgaaaca
    20041 ggctttgctg gaacagttgg cataagcacc ctgccggttt tcaaacggca tcccgccgcc
    20101 acgccgtatg ccgtctgaag gcgggggata ttgcaaacaa tataaactgt caagccgccg
    20161 gcaacgtgct ataatgccgt gcatcttgca caaaccgaaa gaccgagcat tatgcgtatc
    20221 gtagaaaaag cctatacttt cgacgatgtt ttgttggttc ccgcacattc gaccgtgctg
    20281 ccgcgagacg ttaaacttca aaccaagctt acccgcgaaa tcacactcaa cctccccctg
    20341 ctttccgccg cgatggatac cgttaccgag gcgcgcctcg ccatttcgat ggcacaggaa
    20401 ggcggcatcg gcatcatcca taaaaacatg ccgcccgaaa tgcaggcgcg cgccgtttcc
    20461 aaagtaaaac gccacgaaag cggcgtggtc aaagaccccg taaccgttgc gccgacaacg
    20521 ctcatccgcg aagtcttgga aatgcgcgcg cagcgcaaac gcaaaatgtc cggcctgccc
    20581 gtcgttgaaa acggcaaagt cgtcggcatc gtaaccaacc gcgacctgcg ttttgaaaac
    20641 cgcgtcgatt tgcccgtttc cgccattatg accccgcgcg aacgtctggt taccgtcccc
    20701 gaaggcacaa gcatagacga agcgcgcgaa ctgatgcaca cgtacaaagt cgaacgcgtt
    20761 ttggtcctga acgaaaaaga cgagcttaaa ggcttgatta ccattaaaga tattttaaaa
    20821 accaccgagt ttcccaatgc caacaaagac tccgaaggcc gtctgcgcgt cggtgcggca
    20881 gtcggcaccg gcggcgacac cgacgagcgc gtcaaagcct tggtcgaagc cggcgcggac
    20941 gtgattgtcg tcgatactgc ccacggtcat agccaaggcg tgatcgaccg cgtgcgttgg
    21001 gtcaaagaaa cctatccgca catccaagtc atcggcggca acatcgccac tgccaaagcc
    21061 gcattggatt tggtcaccgt cggtgcggat gccgtcaaag tcggtatcgg tccgggatcg
    21121 atttgcacca cccgtatcgt ggcaggcgtg ggcgtgccgc aactgaccgc cattcacaac
    21181 gttgccgaag ccctcaaagg cacgggcgtt ccgctgattg ccgacggcgg catccgcttc
    21241 tccggcgaca tcgccaaagc cctcgccgca ggcgcgtaca gcgtcatgct cggcggtatg
    21301 tttgccggca cggaagaagc cccgggcgaa atcgaactct accaaggccg ctcgtacaaa
    21361 tcctatcgcg gtatgggttc cttgggcgcg atgagccaag gttctgccga ccgctacttc
    21421 caagacaaaa ccgacagcac cgacaaatac gtccccgaag gcatcgaagg ccgcgttccc
    21481 tacaaaggcc cgattgtgaa catcatccac caactgaccg gcggactgcg ttccagtatg
    21541 ggttatttgg gttgcgccaa tattgccgaa atgcacgaaa aagccgaatt tgtggaaatc
    21601 acttccgcag gtatgagcga atcgcacgtt cacgacgttc aaattaccaa agaagcgccg
    21661 aattaccacc gctgatttga acagcctttc aggacaaatg ccgtctgaaa cctaatttcc
    21721 gagtttcaga cggcattttt gttcgttcaa ggcaagccgc acgggctgat tgcgcggacg
    21781 ggcaaagcca ttctgacgga cacgccgaaa gaatgaaaat gccgtctgaa cgccgtttgc
    21841 accccgtctg ccgaataccg tcggccttta aaacggcggt ggaaataaac gcaatctttc
    21901 aatacgggcg tttcgattgg tcggaaatga tgcgccg
//
LOCUS       DAXFZM010000026        21665 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.026, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000026 DAXFZM010000000
VERSION     DAXFZM010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21665)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21665)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21665
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.026"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            153..608
                     /gene="mraZ"
                     /locus_tag="ACFJAG_000853"
     CDS             153..608
                     /gene="mraZ"
                     /locus_tag="ACFJAG_000853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HFC3980193.1"
                     /translation="MFGGAHELSIDSKGRLAVPAKFRDILSRLYTPAVVATLESKHKL
                     LMYPVAEWEKVAAQLLNLKVADNPVLRRFQNLLLHNAEILEWDSAGRVLVPAGLRKRV
                     DFDREVVLVGRANRLELWGREQWEAEMVQALDDDPDELAFQLSQTDLQL"
     gene            605..1561
                     /gene="rsmH"
                     /locus_tag="ACFJAG_000854"
     CDS             605..1561
                     /gene="rsmH"
                     /locus_tag="ACFJAG_000854"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016434 - rRNA (cytosine)
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HFC3980194.1"
                     /translation="MSGAESYRHITVLLNEAVDALAVREDGVYVDGTFGRGGHSRLIL
                     SRLGDAGRLIVFDKDPQAIAVAEELARSDKRVGVVHGGFASFQTALDGLGIGKVDGAL
                     FDLGISSPQIDDGSRGFSFRFDAPLDMRMDTTRGMSAAEWIAVASEQDLHEVIKNYGE
                     ERFSRQIVRAIVAQRAESPIDTTRKLAQIVAQNVRTRERGQDPATRTFQAIRIFINRE
                     LEEVGAVLPQVMCRLKEGGRLAVIAFHSLEDRIVKQFVKKYSQHEPLPSWAAVREADL
                     PEPPLKIVGRALKPGEAEIAANPRARSAVLRVAERTAGPIPE"
     gene            1588..1851
                     /gene="ftsL"
                     /locus_tag="ACFJAG_000855"
     CDS             1588..1851
                     /gene="ftsL"
                     /locus_tag="ACFJAG_000855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsL"
                     /protein_id="HFC3980195.1"
                     /translation="MNKSNFFLLLAVCVSAFSVVMQQNQYRLNFTALDKAKKQEIALE
                     QDYAQMRVQQARLANHEAIRAAAEKQNLHPPVSGNTFMVEHQR"
     gene            1912..3663
                     /locus_tag="ACFJAG_000856"
     CDS             1912..3663
                     /locus_tag="ACFJAG_000856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan D,D-transpeptidase FtsI family
                     protein"
                     /protein_id="HFC3980196.1"
                     /translation="MLIKSEYKPRMLPKEEQVKKPMTSNGRISFVLMAMAVLFACLIA
                     RGLYLQTVTYNFLKEQGDNRIVRTQALPATRGTVSDRNGAVLALSAPTESLFAVPKDM
                     KEMPSAAQLERLSELVDVPVDVLRNKLEQKGKSFIWIKRQLDPKVAEEVKALGLENFV
                     FEKELKRHYPMGNLFAHVIGFTDIDGKGQEGLELSLEDSLYGEDGAEVVLRDRQGNIV
                     DSLDSPRNKAPQNGKDIILSLDQRIQTLAYEELNKAVEYHQAKAGTVVVLDARTGEIL
                     ALANTPAYDPNRPGRADSEQRRNRAVTDMIEPGSAIKPFVIAKALDAGKTDLNERLNT
                     QPYKIGPSPVRDDTHVYPSLDVRGIMQKSSNVGTSKLSARFGAEEMYDFYHELGIGVR
                     MHSGFPGETAGLLRNWRRWRPIEQATMSFGYGLQLSLLQLARAYTALTHDGVLLPLSF
                     EKQAVAPQGKRIFKESTAREVRNLMVSVTEPGGTGTAGAVDGFDVGAKTGTARKLVNG
                     RYVDNKHVGTFIGFAPAKNPRVIVAVTIDEPTANGYYGGVVAGPPFKKIMGGSLNILG
                     VSPTKPLTNVAAVKTPS"
     gene            3688..5166
                     /locus_tag="ACFJAG_000857"
     CDS             3688..5166
                     /locus_tag="ACFJAG_000857"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HFC3980197.1"
                     /translation="MFSKLTPLAETNIPPLLCANAAGRLLHSDSRQIKQGDIFVACQG
                     EYTDGRSYIPAAVVNGAAFVFWDDDGKFAWNPEWKVPNQGIKNLKHRAGMLAAQVYDN
                     VSDGLKVWGVTGTNGKTSITQWLAQAADLLGEKTAIIGTVGNGFWGALEETTHTTPAP
                     VDVQTLLYRFRQQGATAAAMEVSSHGLDQSRVNGVPFRSAIFTNLTRDHLDYHGTMEA
                     YGAIKSRLFYWHGLKHAVINTDDGYGAELAGRLKKDCPDLAVYSYGFSEHADIRITDF
                     TASSDGMEAVFQTPWGEGKCRTRLLGRFNAQNLAACIALLCANGYPLDKVLDVLAKIR
                     PASGRMDCIMNSGKPLVVVDYAHTPDALEKALSTLQEIKPQGAALWCVFGCGGNRDCG
                     KRPLMGAAAVQGADKVVVTSDNPRLENPQDIINDILPAVPAPECVEADRAAAIRYAVE
                     QAAANDIILIAGKGHENYQDVQGVKHRFSDLEIVGQALLTRK"
     gene            5189..6835
                     /locus_tag="ACFJAG_000858"
     CDS             5189..6835
                     /locus_tag="ACFJAG_000858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HFC3980198.1"
                     /translation="MKQSARIKNMDQTLKNTLGICALLAFCFGAAIASGYHLEYEYGY
                     RYSAVGALASVVFLLLLARGFPRVSSVVLLIYVGTTALYLPVGWLYGAPSYQIVGSIL
                     ESNPAEAREFVGNLPGSLYFVQALFFIFGLTVWKYCVSVGVFADVKNYKRRSKIWLTI
                     LLTLILSCAVMEKIAGDKDWREPDAGLLLNIFDLYYDLASAPAQYAAKRAHILEAAKK
                     ASTWHIRHVAPKYKNYVVVIGESARSDYMNVYGFPLPDTPFLSRTKGLLINGYQSTAH
                     ATNLSLPQTLGLPGEPNNNIVSLAKQAGFRTAWLSNQGMLGHFANEISTYALRSDYPW
                     FTQRGDYGKSAGLSDRLLLPAFKRVLTGNAGTKPRLIVMHLMGSHSDFCTRLDKDARR
                     FQYQTEKISCYVSTIAQTDKFLEDTVKILNENKESWSLVYFSDHGLMHVGKGGERTLT
                     HGEWKRQSYGVPLVKISSDDTRREMIKVRRSAFNFLRGFGSWTGIETDELPDDGYDFW
                     GNVPDVPGEGNNLAFIDRQSDDPAPWYAGKGKSAKNTSKK"
     gene            6960..8318
                     /gene="murF"
                     /locus_tag="ACFJAG_000859"
     CDS             6960..8318
                     /gene="murF"
                     /locus_tag="ACFJAG_000859"
                     /EC_number="6.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0047480 -
                     UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HFC3980199.1"
                     /translation="MKPLDLNFICQALKLPMPSENKPVSRIVTDSRDIREGDVFFALA
                     GGRFDAHDFVGGVLSAGAAAVVVSREDCAALGGALKVDDMLAALQTLAKAWRDNVNPF
                     VFGITGSGGKTTVKEMLAAVLRRRFGDDAVSATAGNFNNHIGLPLTLLKLNEKHRYAV
                     IEMGMNHFGELAVLTQIAKPDAALVNNALRAHVGCGFDGVGDIAKAKSEIYAGLCSDG
                     MALIPQEDANMAVFKTATFNLNTCTFGVDSGDVRAENIVLKPLSCEFDLVCGDERTAV
                     VLPVPGRHNVHNAAAAAALALAAGLSLNDVAEGLQGFSNIKGRLNVKAGIKGATLIDD
                     TYNANPDSMKAAVDVLARMPAPRIFVMGDMGELGEDEAAAMHAEVGAYARDQGIEAAY
                     FVGDNSVEAAEKFGADGLWFAAKDPLIQVLSHDLPERATVLVKGSRFMQMEEVVEALE
                     DK"
     gene            8321..8497
                     /locus_tag="ACFJAG_000860"
     CDS             8321..8497
                     /locus_tag="ACFJAG_000860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980200.1"
                     /translation="MKSRRFFKALLLIAALVGAFYAGMRTQAYLYEDLCLDLGGGKNP
                     GSYPICVIGKVPAR"
     gene            8742..9824
                     /gene="mraY"
                     /locus_tag="ACFJAG_000861"
     CDS             8742..9824
                     /gene="mraY"
                     /locus_tag="ACFJAG_000861"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009310927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008963 -
                     phospho-N-acetylmuramoyl-pentapeptide-transferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HFC3980201.1"
                     /translation="MFLWLAHFSNWLTGLNIFQYTTFRAVMAALTALAFSLMFGPWTI
                     RRLTALKCGQAVRTDGPQTHLVKNGTPTMGGSLILTAITVSTLLWGNWANPYIWILLG
                     VLLATGALGFYDDWRKVVYKDPNGVSAKFKMVWQSSVAVIAGLALFYLAANSANNILI
                     VPFFKQIALPLGVVGFLVLSYLTIVGTSNAVNLTDGLDGLAAFPVVLVAAGLAIFAYV
                     SGHYQFSQYLQLPYVAGANEVAIFCTAMCGACLGFLWFNAYPAQVFMGDVGALALGAA
                     LGTVAVIVRQEFVLVIMGGLFVVEAVSVMLQVGWYKKTKKRIFLMAPIHHHYEQKGWK
                     ETQVVVRFWIITIVLVLIGLSTLKIR"
     gene            9949..10329
                     /locus_tag="ACFJAG_000862"
     CDS             9949..10329
                     /locus_tag="ACFJAG_000862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003700334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HFC3980202.1"
                     /translation="MKQTVKWLAAALIALGLNQAVWAGDVSDFRENLQAAEQGNAAAQ
                     FNLGVMYENGQGVRQDYVQAVQWYRKASEQGDAQAQYNLGLMYYDGRGVRQDLALAQQ
                     WLGKACQNGDQNSCDNDQRLKAGY"
     gene            10414..11751
                     /gene="murD"
                     /locus_tag="ACFJAG_000863"
     CDS             10414..11751
                     /gene="murD"
                     /locus_tag="ACFJAG_000863"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008764 -
                     UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
                     [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HFC3980203.1"
                     /translation="MTFQNKKTLVAGLGGTGISMIAYLRKNGAEVAAYDAELKAERVA
                     QIGKMFDGLVFYTGRLKDALDNGFDILALSPGISERQPDIEAFKQNGGRVLGDIELLA
                     DIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTPVLEAELQREGKK
                     ADVWVLELSSFQLENTESLRPTAATVMNISEDHLDRYDDLLDYAHTKAKIFRGDGVQV
                     LNADDVFCRAMKRAGREVKRFSLEHEADFWLERGTGCLKQGNEDLISTQDIPLQGLHN
                     AANVMAAVALCEAVGLPREALLEHVKTFQGLPHRVEKIGEKNGVVFIDDSKGTNVGAT
                     AAAIAGLQNPLFVILGGMGKGQDFTPLRDALKDKAKGVFLIGVDAPQIRRDLDGCGLN
                     LTDCVTLEEAVQTAYAQAEAGDIVLLSPACASFDMFKGYAHRSEVFIEAFKAL"
     gene            11930..13201
                     /locus_tag="ACFJAG_000864"
     CDS             11930..13201
                     /locus_tag="ACFJAG_000864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /protein_id="HFC3980204.1"
                     /translation="MGDGVHTLLLDRPIVRDGRKFDAPLLWMVVLMTAFGLLMIYSAS
                     VYLASKEGGDQFFYLTRQAGFVVAGLIASGFLWFLCRMRTWRRLVPWIFALSGLLLVA
                     VLIAGREINGATRWIPLGPLNFQPTELFKLAVILYLASLFTRREEVLRSMESLGWQSI
                     WRGTANLIMSATNPQARRETLEMYGRFRAIILPIMLVAFGLVLIMVQPDFGSFVVITV
                     ITVGMLFLAGLPWKYFFVLVGSVLGGMVLMITAAPYRVQRVVAFLDPWKDPQGAGYQL
                     THSLMAIGRGEWFGMGLGASLSKRGFLPEAHTDFIFAIIAEEFGFFGMCVLIFCYGWL
                     VVRAFSIGKQSRDLGLTFNAYIASGIGIWIGIQSFFNIGVNIGALPTKGLTLPLMSYG
                     GSSVFFMLISMMLLLRIDYENRQKMRGYRVE"
     gene            13205..14272
                     /gene="murG"
                     /locus_tag="ACFJAG_000865"
     CDS             13205..14272
                     /gene="murG"
                     /locus_tag="ACFJAG_000865"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050511 -
                     undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HFC3980205.1"
                     /translation="MGGKTFMLMAGGTGGHIFPALAVADSLRVRGHHVIWLGSKDSME
                     ERIVPQYGIRLETLAIKGIRGNGIKRKLMLPFTLYKTVREAQRIIRKHRVECVIGFGG
                     FVTFPGGLAAKLLGVPIVIHEQNAVAGLSNRHLSRWAKRVLYAFPKAFSHEGGLVGNP
                     VRADISNLPVPAERFQGREGRLKILVVGGSLGADVLNKTVPQALALLPEEVRPQMYHQ
                     SGRNKLGNLQADYDALGVKAECVEFITDMVSAYRDADLVICRAGALTIAELTAAGLGA
                     LLVPYPHAVDDHQTANARFMVQAEAGLLLPQTQLTAEKLAEILGSLNREKCLKWAENA
                     RTLALPHSADDVAEAAIACAA"
     gene            14427..15836
                     /gene="murC"
                     /locus_tag="ACFJAG_000866"
     CDS             14427..15836
                     /gene="murC"
                     /locus_tag="ACFJAG_000866"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008763 - UDP-N-acetylmuramate-L-alanine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HFC3980206.1"
                     /translation="MMKNRVSNIHFVGIGGVGMSGIAEVLHNLGFKVSGSDQARNAAT
                     EHLSSLGIQVYPGHTAEHVNGADVVVASTAVKKENPEVVAALERQIPVIPRALMLAEL
                     MRFRDGIAIAGTHGKTTTTSLTASILGAAGLDPTFVIGGKLNAAGTNARLGKGEYIVA
                     EADESDASFLHLTPIMSVVTNIDEDHMDTYGHSVEKLHQAFIDFIHRMPFYGKAFLCV
                     DSEHVRAILPKVSKPYATYGLDDTADIYATDIENVGAQMKFTVHVQMKGHEQGSFEVV
                     LNMPGRHNVLNALAAIGVALEVGASVEAIQKGLLGFEGVGRRFQKYGDIKLPNGGTAL
                     LVDDYGHHPVEMAATLAAARGAYPEKRLVLAFQPHRYTRTRDLFEDFTKVLNTVDALV
                     LTEVYAAGEEPVAAADSRALARAIRVLGKLEPIYCENVADLPQMLMNVLQDGDVVLNM
                     GAGSINRVPSALLELSKQI"
     gene            15948..16862
                     /locus_tag="ACFJAG_000867"
     CDS             15948..16862
                     /locus_tag="ACFJAG_000867"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003764621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008716 - D-alanine-D-alanine ligase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HFC3980207.1"
                     /translation="MQNFGKVAVLMGGFSSEREISLDSGTAILNALKSKGIDAYAFDP
                     KETPLSELKERGFQTAFNILHGTYGEDGAVQGALELLGIPYTGSGVAASAIGMDKYRC
                     KLIWQALGLPVPEFAVLYDDTDFDAVEEKLGLPMFVKPAAEGSSVGVVKVKEKGRLKS
                     VYEELKHLQGEIIAERFIGGGEYSCPVLNGKGLPGIHIIPATEFYDYEAKYNRDDTIY
                     QCPSEDLTEAEESLMRELAVRGAQAIGAEGCVRVDFLKDTDGKLYLLEINTLPGMTGH
                     SLVPKSAAVTGVGFADLCIEILKAAHVG"
     gene            16852..17580
                     /locus_tag="ACFJAG_000868"
     CDS             16852..17580
                     /locus_tag="ACFJAG_000868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsQ/DivIB"
                     /protein_id="HFC3980208.1"
                     /translation="MWDNAEAMERLTRWLLVMMAMLLAASGLVWFYNSNHLPVKQVSL
                     KGNLVYSDKKALGSLAKEYIHGNILRTDINGAQEAYRRYPWIASVMVRRRFPDTVEVV
                     LTERKPVARWGDHALVDGEGNVFEARLDRPGMPVFRGAEGTSAEMLRRYDEFSTVLAK
                     QGLGIKEMTYTARSAWNVVLDNGITVRLGRENEMKRLRLFTEAWQHLLRKNKNRLSYV
                     DMRYKDGFSVRHAPDGLPEKESEE"
     gene            17666..18910
                     /gene="ftsA"
                     /locus_tag="ACFJAG_000869"
     CDS             17666..18910
                     /gene="ftsA"
                     /locus_tag="ACFJAG_000869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043093 - FtsZ-dependent cytokinesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HFC3980209.1"
                     /translation="MEQQKRYISVLDIGTSKVLALIGEVQDDDKINIIGLGQAPSRGL
                     RAGMVTNIDATVQAIRQAVNDAELMADTKITHVTTGIAGNHIRSLNSQGVVKIKDGEV
                     TQADIDRAIETAKAINIPPDQKILDAVVQDYIIDTQLGVREPIGMSGVRLDTRVHIIT
                     GASTAVQNVQKCIELCGLKSDQIMLQPLASGQAVLTEDEKDLGVCVIDIGGGTTDIAV
                     YMNGAIRHTSVIPAGGNLITKDLSKSLRTPLDAAEYIKIHYGVASCDTEGLGEMIEVP
                     GVGDRTSRQVSSKVLAAIISARIQEIFGVVLGELQKSGFPKEVLNAGIVLTGGVSMMT
                     GIVEFAEKIFDLPVRTGAPQEMGGLSDRVRTPRFSTAIGLLHAACKLEGNLPQPENGT
                     VQEREGGGGLLARLKRWIENNL"
     gene            19029..20207
                     /gene="ftsZ"
                     /locus_tag="ACFJAG_000870"
     CDS             19029..20207
                     /gene="ftsZ"
                     /locus_tag="ACFJAG_000870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HFC3980210.1"
                     /translation="MEFVYDVAESAVSPAVIKVIGLGGGGCNAINNMVANNVRSVEFI
                     SANTDAQSLAKNHAAKRIQLGTNLTRGLGAGANPDIGRAAAQEDREAIEEAIRGANML
                     FITTGMGGGTGTGSAPVVAEIAKSLGILTVAVVTRPFSYEGKRVHVAQAGLEQLKEYV
                     DSLIIIPNDKLMTALGEDVTMREAFRAADNVLRDAVAGISEVVTCPSEIINLDFADVK
                     TVMSNRGIAMMGSGYAQGIDRARMATDQAISSPLLDDVTLDGARGVLVNITTAPGCLK
                     MSELSEVMKIVNQSAHPDLECKFGAAEDETMSEDAIRITIIATGLKEKGAVDPTPARE
                     VEAVAPSKQEQSHNVEGMIRTNRGIRTMNLTAADFDNQSVLDDFEIPAILRRQHNSDK
                     "
     gene            20343..21653
                     /locus_tag="ACFJAG_000871"
     CDS             20343..21653
                     /locus_tag="ACFJAG_000871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015205 - nucleobase transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HFC3980211.1"
                     /translation="MDISKQTLLDRVFNLKANGTTVRTELMAGLTTFLTMCYIVIVNP
                     LILGETGMDMGAVFVATCIASAIGCFVMGFIGNYPIALAPGMGLNAYFTFAVVKGMGV
                     PWQVALGAVFISGLIFILFSFFKVREMLVNALPMGLKMSIAAGIGLFLALISLKGAGI
                     IVANPATLVGLGDIHQPSALLALFGFVMVVVLGYFRVQGAIIITILTITVIASLMGLN
                     EFHGVVGEVPGIAPTFMQMDFKGLFTVSMVSVIFVFFLVDLFDSTGTLVGVSHRAGLL
                     VDGKLPRLKRALLADSTAIVAGAALGTSSTTPYVESAAGVSAGGRTGLTAVTVGVLML
                     ACLMFSPLAKSVPVFATAPALLYVGTQMLRSARDIDWDDMTEAAPAFLTIVFMPFTYS
                     IADGIAFGFISYAVVKLLCRRTGDVPPMVWVVAVLWALKFWYLG"
BASE COUNT         4960 a         5410 c         6225 g         5070 t
ORIGIN      
        1 taaacagaat aaaaatttca gatatgttaa tgagttttca tgccctgatt tgaccgagtg
       61 tttaaaattt cttatagtgt cgattggtgg ggaattgtgg ggcaaagtgt ctcttttacc
      121 cttgtgattt tgatttcggc ttggggcatg tcatgttcgg cggcgcacac gaattaagca
      181 tcgacagtaa ggggcggttg gctgttcctg ccaaattccg cgacattctg tcgcgcctct
      241 atacgcctgc cgtagtggca acgctcgagt cgaaacataa gctgttgatg taccctgttg
      301 cggagtggga aaaggttgcg gcgcaacttt taaacttaaa agtggcggat aaccctgttt
      361 tgcggcggtt tcaaaatctt ttgctgcata acgcggaaat tttggaatgg gacagcgccg
      421 gcagggtgct ggttcctgcc ggactgagga aaagggtgga tttcgaccgt gaagttgttt
      481 tggtcggccg tgccaaccgt ttggagcttt ggggtcgcga gcagtgggag gctgagatgg
      541 ttcaggcttt ggatgacgat cctgacgaac ttgccttcca gttgagtcag acggatttgc
      601 aattgtgagt ggagcagaaa gttaccggca tatcacggtc ttgctgaatg aggcggtgga
      661 tgcgcttgcc gtgcgcgaag acggtgtcta tgtggacggt acgttcggca ggggagggca
      721 ttcccggctg attttgtcgc gtttgggcga tgcggggcgg ttgattgttt tcgacaaaga
      781 cccgcaggcg attgctgtgg cagaagagct ggcgcgttcg gacaaacggg tcggtgtcgt
      841 gcatggcggt tttgcttcgt ttcagacggc attggacggt ttgggtatcg gcaaggtgga
      901 cggtgcgctg tttgatttgg ggatttcgtc tccgcaaatc gatgacggca gccgcggttt
      961 cagcttccgt ttcgatgccc ctttggatat gcgtatggat acgacgcgcg gtatgtctgc
     1021 cgcagagtgg atagcggttg cgtcggaaca ggatttgcac gaggtaatca agaattatgg
     1081 tgaagagcgg tttagccgcc agattgtgcg cgccattgtc gcgcaacggg cggaaagtcc
     1141 aatcgataca acccgcaagc tggcgcagat cgtggcacaa aacgtccgta ctcgcgagcg
     1201 ggggcaggat cctgcgacgc gcaccttcca ggcaatccgc atctttatta accgcgagct
     1261 tgaagaagta ggggcggtat tgccgcaggt catgtgccgt ctgaaagagg gcgggcgttt
     1321 ggcggtcatt gctttccatt cgttggaaga ccgcattgtg aagcagtttg tcaaaaaata
     1381 ttcgcaacac gagcccctgc cgagctgggc ggcggtcaga gaagcggatt tgcccgagcc
     1441 gcccctgaaa atcgtgggca gggcattaaa gccgggtgaa gcggaaattg ccgccaaccc
     1501 gagggcgagg agcgcagttt tgcgtgtggc ggagcggact gccggtccga taccggaata
     1561 ataacagaga aaaacgtctg aacggcaatg aacaaatcga atttctttct gctgcttgcg
     1621 gtgtgcgttt ccgctttttc cgttgtgatg cagcaaaacc agtacaggct caacttcaca
     1681 gctttggaca aggcgaaaaa acaggaaatc gccttggagc aggattatgc gcaaatgagg
     1741 gtgcaacagg cgcgtttggc gaatcacgaa gcgatcaggg cggcggcaga aaaacaaaac
     1801 ctccatccgc cggtttcggg caataccttt atggtggaac atcaaagata gaagcagcct
     1861 gtgtgccgga atcggattcc tgcatcagga taataataac gagaagtaaa aatgttgatt
     1921 aaaagcgaat ataagccccg gatgctgccc aaagaagagc aggtcaaaaa gccgatgacc
     1981 agtaacggac ggattagctt cgtcctgatg gcaatggcgg tcttgtttgc ctgtctgatt
     2041 gcccgcgggc tgtatctgca gacggtaacg tataactttt tgaaagaaca gggcgacaac
     2101 cggattgtgc ggactcaagc attgccggct acacgcggta cggtttcgga ccggaacggt
     2161 gcggttttgg cgttgagcgc gccgacggag tccctgtttg ccgtgcctaa agatatgaag
     2221 gaaatgccgt ctgccgccca attggaacgc ctgtccgagc ttgtcgatgt gccggtcgat
     2281 gttttgagga acaaactcga acagaaaggc aagtcgttta tttggatcaa gcggcagctc
     2341 gatcccaagg ttgccgaaga ggtcaaagcc ttgggtttgg aaaactttgt atttgaaaaa
     2401 gaattaaaac gccattaccc gatgggcaac ctgtttgcac acgtcatcgg atttaccgat
     2461 attgacggca aaggtcagga aggtttggaa ctttcgcttg aagacagcct gtatggcgaa
     2521 gacggcgcgg aagttgtttt gcgggaccgg cagggcaata ttgtggacag cttggactcc
     2581 ccgcgcaata aagcaccgca aaacggcaaa gacatcatcc tttccctcga tcagaggatt
     2641 cagaccttgg cctatgaaga gttgaacaag gcggtcgaat accatcaggc aaaagccgga
     2701 acggtggtgg ttttggatgc ccgcacgggg gaaatcctcg ccttggccaa tacgcccgcc
     2761 tacgatccca acagacccgg ccgggcagac agcgaacagc ggcgcaaccg tgccgtaacc
     2821 gatatgatcg aacctggttc ggcaatcaaa ccgttcgtga ttgcgaaggc attggatgcg
     2881 ggcaaaaccg atttgaacga acggctgaat acgcagcctt ataaaatcgg accgtctccc
     2941 gtgcgcgacg atacccatgt ttacccctct ttggatgtgc gcggcattat gcagaaatcg
     3001 tccaacgtcg gcacaagcaa actgtctgcg cgtttcggcg ccgaagaaat gtatgacttc
     3061 tatcatgaat tgggcatcgg tgtgcgtatg cactcgggct ttccggggga aactgcaggt
     3121 ttgttgagaa attggcgcag gtggcggccc atcgaacagg cgacgatgtc tttcggttac
     3181 ggcctgcaat tgagcctgct gcaattggcg cgcgcctata ccgcactgac gcacgacggc
     3241 gttttgctgc cgctcagctt tgagaagcag gcggttgcgc cgcaaggcaa acgcatattc
     3301 aaagaatcga ccgcgcgcga ggtacgcaat ctgatggttt ccgtaaccga gccgggcggc
     3361 accggtacgg cgggtgcggt ggacggtttc gatgtcggcg ctaaaaccgg tacggcgcgc
     3421 aaactggtca atggccgcta tgtggacaac aaacacgtcg gtacgtttat cggttttgct
     3481 ccggctaaaa atccacgcgt gattgtggcc gttaccatcg acgagccgac tgcaaacggt
     3541 tactacggcg gcgtagtggc aggtccgccc ttcaaaaaaa ttatgggcgg cagcctgaac
     3601 atcttgggcg tttccccgac caaacctttg accaatgttg cagccgtcaa aacaccgtct
     3661 taatccgagt atcaacgaga ttattttatg ttcagcaagt taaccccttt agctgaaacc
     3721 aacattccgc ctctgctgtg tgcaaacgca gcagggcgtt tgttgcattc agacagccgt
     3781 caaatcaaac aaggtgatat tttcgttgcc tgtcagggcg aatataccga cggccgcagt
     3841 tatatccccg ccgccgttgt caacggcgcg gcttttgttt tttgggacga cgacggcaaa
     3901 ttcgcgtgga atcccgaatg gaaagtcccc aatcaaggca tcaaaaattt gaaacaccgt
     3961 gccggcatgt tggcggcgca agtgtacgac aacgtttcag acggcctcaa agtctggggc
     4021 gtaaccggca ccaacggcaa aacctccatc acacaatggc tggcgcaggc tgccgattta
     4081 ttgggcgaaa aaaccgccat tatcggcacg gtcggcaacg gcttttgggg cgcattggaa
     4141 gaaaccacgc acaccacccc cgcccccgtc gatgtccaaa ccctgctcta ccgtttccgc
     4201 caacagggcg caacagccgc cgcgatggaa gtctccagcc acggtcttga ccagtcgcgc
     4261 gtcaacggcg tgccattccg cagcgcaatc tttaccaacc tcacccgaga ccacctcgac
     4321 tatcacggca cgatggaagc ctacggtgct atcaagtcgc gcctgtttta ctggcacggc
     4381 ttgaaacacg ccgttatcaa taccgatgac ggatacggcg cggaactcgc aggtcgtctg
     4441 aaaaaagact gtcccgattt agccgtttac agctatggtt tcagcgaaca cgccgacatc
     4501 cgcattaccg actttaccgc ctcttcagac ggcatggaag ccgtattcca aaccccgtgg
     4561 ggcgaaggaa aatgccgcac ccgcctgctc ggacggttca acgcgcaaaa cctcgccgcc
     4621 tgcatcgcct tgctttgtgc caacggttat ccgcttgata aggtattgga tgtgctggca
     4681 aaaatccgtc ccgcttcagg gcgcatggac tgcatcatga acagcggcaa gcccttggtc
     4741 gtcgtcgatt acgcccacac gcccgacgca ttggaaaaag cactctccac tttgcaggaa
     4801 atcaaaccgc agggtgcggc cttatggtgc gtattcggtt gcggcggcaa ccgcgattgc
     4861 ggcaaacgcc cattgatggg cgcggcagcc gtacagggcg cggataaagt cgtcgtaacc
     4921 agcgacaacc cgcgtttgga aaatccgcaa gacatcatca acgacatcct gcccgccgtg
     4981 cccgcgcccg aatgcgtcga agccgaccgt gccgccgcca tccgttatgc ggttgagcag
     5041 gccgccgcaa acgacatcat cctgattgcc ggcaaaggac acgaaaacta tcaggatgta
     5101 cagggcgtga agcaccgttt ttccgatctt gaaatcgtcg ggcaggcttt gttaactcgt
     5161 aaataatggg atattcggac ggcatcgtat gaaacaatcc gcccgaataa aaaatatgga
     5221 tcagacatta aaaaatacat tgggcatttg cgcgctttta gccttttgtt ttggcgcggc
     5281 catcgcatca ggttatcact tggaatatga atacggctac cgttattctg ccgtgggcgc
     5341 tttggcttcg gttgtatttt tattattatt ggcacgcggc ttcccgcgcg tttcttcagt
     5401 tgttttactg atttacgtcg gcacaaccgc cctatatttg ccggtcggct ggctgtatgg
     5461 tgcgccttct tatcagatag tcggttcgat attggaaagc aatcctgccg aggcgcgtga
     5521 atttgtcggc aatcttcccg ggtcgcttta ttttgtgcag gcattatttt tcatttttgg
     5581 cttgacagtt tggaaatatt gtgtatctgt gggggtattt gctgacgtaa aaaactataa
     5641 acgccgcagc aaaatatggc tgaccatatt attgactttg attttatcct gcgcggtgat
     5701 ggagaaaatc gccggcgata aagattggcg agaacctgat gccggcctgt tgttgaatat
     5761 tttcgacctg tattacgatt tggcttccgc gccggcacaa tatgccgcca agcgcgccca
     5821 cattttggaa gcagcaaaaa aagcgtcaac atggcatatc cgtcatgttg cgcccaagta
     5881 taaaaattat gttgtggtta tcggtgagag cgcgcgttcg gattatatga atgtttacgg
     5941 tttcccattg cccgatacgc cttttttgag tcggaccaaa gggctgttga taaacggtta
     6001 ccaatcgacc gcccacgcga cgaatctttc gctgccgcag actttggggc tgccgggaga
     6061 accgaacaat aacattgtca gcttggcgaa gcaggctggt tttcggacgg cgtggctgtc
     6121 taatcaagga atgttggggc attttgccaa cgaaatttcc acctatgccc tacgcagcga
     6181 ttatccgtgg tttacccaaa ggggtgatta tggcaaaagc gcgggattga gcgaccgcct
     6241 tttgttgccg gcgttcaaac gggttttgac aggaaatgca ggcacgaagc ctcggctgat
     6301 tgtgatgcac ctgatgggtt cgcacagtga tttttgcaca cgtttggata aggatgcgcg
     6361 gcggtttcag tatcaaactg aaaaaatatc ctgctatgtt tccaccatcg cgcaaaccga
     6421 taaattttta gaagatacgg ttaagatatt gaatgaaaat aaagaaagct ggtctttggt
     6481 ttacttttcc gaccacggtt tgatgcatgt cggcaaaggc ggcgagcgaa cgttgacaca
     6541 cggcgagtgg aagcgtcaaa gctacggcgt gccgctggtt aaaatttcgt ccgatgacac
     6601 gcggcgcgaa atgattaaag tgaggcgcag cgcgtttaat tttttacgcg gattcggcag
     6661 ttggacgggt atcgaaaccg acgagttgcc cgatgacggc tatgattttt gggggaatgt
     6721 ccccgatgtg ccgggcgaag gcaataacct tgcctttatc gacagacagt ccgacgaccc
     6781 cgcgccgtgg tatgcgggaa aaggcaaatc ggctaaaaat acgtctaaaa aatgatacgt
     6841 acagaaaaaa tgccgaatga gaatgggaaa ataatctgtg ttttaccaca gcaaaacagg
     6901 cgataaaaaa atcagccgct accgatgtgt ccgccgcccg aatattaacg aaagcaaata
     6961 tgaaaccatt ggacctaaat ttcatctgcc aagccctcaa gcttccgatg ccgtctgaaa
     7021 acaaacccgt gtcgcgcatc gtaaccgaca gccgcgatat tcgggaaggc gatgtgtttt
     7081 tcgcattggc gggcgggcgg tttgacgcgc atgattttgt tggaggcgta ttgtctgcgg
     7141 gcgcggcggc ggttgtggtt tcgcgcgaag attgcgcggc tttgggcggc gcgttgaaag
     7201 tcgatgacat gcttgccgcg ttgcaaacgt tggcgaaggc gtggcgcgat aatgtgaacc
     7261 cgtttgtgtt cggcattacc ggttcgggcg gcaagacgac ggtgaaggag atgctggctg
     7321 cggtattgcg ccgccgtttc ggcgatgatg ccgtttcggc gacggcaggc aacttcaaca
     7381 accacatcgg attgccgctg actttattga aattaaacga aaaacaccgc tatgccgtga
     7441 ttgaaatggg catgaaccat tttggcgaac tggcggtttt aacgcaaatc gccaaacccg
     7501 atgccgcttt ggtcaacaac gccctgcgcg cccatgtcgg atgcggtttc gacggagtgg
     7561 gcgatattgc caaagcgaaa agcgagattt atgcaggctt atgttcagac ggcatggcac
     7621 tgattcctca agaagatgcc aatatggctg tcttcaaaac ggcaacgttt aatttgaata
     7681 cgtgcacttt cggcgtcgat agcggcgatg tccgcgcgga aaatatcgtg ctgaaacctt
     7741 tgtcgtgcga atttgatttg gtgtgcggcg acgagcgcac tgccgtggtg ctgcctgttc
     7801 ccggccgcca caatgtccac aacgccgccg ctgccgccgc gctggctttg gctgccggtt
     7861 tgagtttgaa cgatgtggcg gaaggtttgc aaggcttcag caacatcaaa ggccgtctga
     7921 acgtcaaagc cggcatcaag ggcgcaaccc tgattgacga tacttataat gcgaatcccg
     7981 acagtatgaa agccgcggtt gacgtgttgg cgcgtatgcc tgcgccgcgc attttcgtga
     8041 tgggcgatat gggcgaactg ggcgaggacg aagccgccgc catgcacgcc gaagtcggcg
     8101 cgtacgcccg cgaccaaggc atcgaagcgg cttattttgt cggcgacaac agcgtcgaag
     8161 cggcggaaaa atttggcgcg gacggtttgt ggttcgccgc caaagacccg ttgattcaag
     8221 tgttgagcca cgatttgccc gaacgcgcca ccgtgttggt gaaaggttcg cgctttatgc
     8281 agatggaaga agtggtcgag gcattggagg ataagtgaaa atgaaaagcc gacgtttttt
     8341 taaagcctta ttgctgattg ccgcgctggt cggcgcgttt tatgccggaa tgcggacgca
     8401 ggcgtatctt tatgaagatt tatgtttaga cttgggcggc ggcaaaaatc cggggagcta
     8461 cccgatttgc gtgattggga aagtccctgc acgttaatct gcaaaagtcg tccgaaacct
     8521 tgccggacag caagcaaacc tcaagcgggc gcaagcccga tgtatagcgg attaacaaaa
     8581 atcaggacaa ggcggcgggc cgcagacagt acggatagta cggaaccgat ccgcccggtg
     8641 cttgggcgcc ttagggaacc gttccctttg agccggggcg gggcaacgac gtaccggttt
     8701 ttgttaatcc gctataacga caaaacaaaa aaggaagccc catgttttta tggctcgcac
     8761 atttcagcaa ctggttaacc ggtctgaata tttttcaata caccacattc cgcgccgtta
     8821 tggcggcgtt gaccgccttg gcgttttccc tgatgttcgg cccgtggacg atacgcaggc
     8881 tgaccgcgct caaatgcggg caggcagtgc gtaccgacgg cccgcaaacc cacctcgtca
     8941 aaaacggcac gccgacgatg ggcggttcgc tgattctgac cgccattacc gtgtccaccc
     9001 tgttgtgggg caactgggcg aacccgtata tctggattct cttgggcgta ctgcttgcca
     9061 ccggtgcgct cggtttttac gacgactggc gcaaagtcgt ttataaagac cccaacggcg
     9121 tgtccgccaa attcaaaatg gtgtggcagt caagcgttgc cgttatcgcc ggtttggcat
     9181 tgttttacct tgccgccaat tccgccaaca atattttgat tgtcccgttt ttcaaacaaa
     9241 tcgccctgcc gctgggcgtg gtcggctttt tggtgttgtc ttacctgacc atcgtcggca
     9301 catccaacgc cgtcaacctc accgacggct tggacggcct tgccgccttc cccgtcgtcc
     9361 tcgttgccgc cgggctcgcc attttcgcct acgtcagcgg acactaccaa ttttcccaat
     9421 acctccagct tccctatgtc gccggcgcga acgaagtcgc tatattctgc accgccatgt
     9481 gcggcgcgtg cctcggattt ttgtggttca acgcctatcc cgcgcaagtc tttatgggcg
     9541 atgtcggcgc gctggcattg ggtgccgcgc tcggtaccgt tgccgtcatc gtccgccaag
     9601 aatttgtcct cgtcattatg ggcggtctgt tcgtcgtaga agccgtgtcc gttatgcttc
     9661 aggtcggctg gtacaagaaa accaaaaaac gcatcttcct gatggcgccg attcatcacc
     9721 attacgaaca aaaaggctgg aaagaaaccc aagtcgtcgt ccgtttctgg attattacca
     9781 tcgtcttggt attgatcggt ttgagtaccc tcaaaattcg ctgaacctat gccgtccgaa
     9841 cacctttcag acggcatttg aacgcgcaat aaacctgcgg cggcaatccg ccccgtccta
     9901 tcgttaacgg cggctgaaac ccgccttata ctaaaacagg agaaaaccat gaaacagaca
     9961 gtcaaatggc ttgccgccgc cctgattgcc ttgggcttga accaagcggt gtgggcgggt
    10021 gacgtatcgg attttcggga aaacttgcag gcggcagaac agggaaatgc agcagcccaa
    10081 ttcaatttgg gcgtgatgta tgaaaatgga caaggagttc gtcaagatta tgtacaggca
    10141 gtgcagtggt atcgcaaggc ttcagaacaa ggggatgccc aagcccaata caatttgggc
    10201 ttgatgtatt acgatggacg cggcgtgcgc caagaccttg cgctcgctca acaatggctt
    10261 ggcaaggctt gtcaaaacgg agaccaaaac agctgcgaca atgaccaacg cctgaaggcg
    10321 ggttattaat cggctcgcga tgccgtctga aagcggcttg ggcaagggcg gacgtctcct
    10381 gcccaatatg atttgtttta ggacaaaacc aaaatgactt tccaaaacaa aaaaaccctc
    10441 gtcgccggac ttggcggcac gggtatttcc atgattgcct atctgcgcaa aaacggcgcg
    10501 gaggttgccg cttatgatgc ggagctgaaa gccgagcgcg tggcgcaaat cggtaagatg
    10561 tttgacgggc tggtgtttta cacgggtcgt ctgaaagatg cgttggacaa cggtttcgat
    10621 attctggcgc tcagtcccgg catcagcgag cggcagccgg atatcgaggc gttcaagcaa
    10681 aacggcgggc gcgtgctagg cgacatcgaa ttgctggcgg acattgtgaa ccgccgcggc
    10741 gacaaggtga ttgcgattac cggcagcaac ggcaaaacca cggtaacgag cctggtcggc
    10801 tatctctgca tcaagtgcgg gctggatacc gtcattgcgg gcaatatcgg tacgccggtt
    10861 ttggaggcag aattgcagcg cgaaggcaaa aaggcggacg tgtgggtgtt ggagctttcc
    10921 agcttccaac tggaaaacac cgaaagcctg cgcccgactg cggcgacggt gatgaacatt
    10981 tccgaagacc atctcgaccg ctacgacgat ttgctcgact acgcgcatac caaagccaag
    11041 attttccgtg gcgatggagt gcaggttttg aatgcggacg acgtgttctg ccgcgccatg
    11101 aaacgggcag ggcgtgaagt gaaacggttt tccttggaac acgaagccga tttttggttg
    11161 gaacgcggga cgggctgttt aaaacaaggc aatgaagatt tgatttctac gcaagacatc
    11221 ccgctgcaag gtttgcacaa cgccgccaac gttatggctg ccgtggcttt gtgcgaggcc
    11281 gtcggtttgc cgcgcgaagc attgctggaa cacgtcaaaa ccttccaagg cttgccgcac
    11341 cgtgtggaaa aaatcggcga gaaaaacggc gtggtattca tcgacgacag caaaggcacg
    11401 aatgtcggcg cgaccgccgc cgcgattgcc ggtttgcaaa acccgctctt cgtgattttg
    11461 ggcggcatgg gcaaagggca ggacttcacg cccctgcgcg acgcgttgaa agataaggca
    11521 aaaggcgtgt tcctgatcgg cgtcgatgcg ccgcaaatcc gccgcgattt ggacggctgc
    11581 ggcttgaacc tgaccgactg cgtcactttg gaagaggcgg ttcagacggc atacgcccaa
    11641 gccgaagcgg gcgatattgt cttgctcagc cccgcctgcg cgagtttcga tatgtttaaa
    11701 ggctacgcgc accgttcgga agtgtttatc gaagcgttta aggctttgtg atgccgtccg
    11761 aaacgcaaac gccgtcattg ttgggcggca agtaaagatt tagaataccg atttgggatg
    11821 tatcgtatgt tcggacggca ttgtctgccg tctgaaattt ttgccctttg cggcaggtgc
    11881 aaacagactg gcaggtggtt ttttgaagat ttcggaagta ttggtaaaag tgggcgacgg
    11941 tgtccacact ctgctgctcg acaggccgat tgtgcgcgac ggcaggaaat tcgacgcgcc
    12001 gcttttgtgg atggtggtgc tgatgacggc gttcggcctg ctgatgattt attcggcttc
    12061 tgtgtatttg gcatcgaagg aaggcggcga tcagtttttc tatttgacca ggcaggcggg
    12121 gttcgtcgtt gccggcctta tagcgagcgg ttttttatgg tttctttgca ggatgaggac
    12181 atggcggcgg cttgtgccgt ggatttttgc cttatccggc ctgttgctgg tagccgtatt
    12241 gattgccggg cgcgaaatca atggcgcgac ccgttggata cctttgggtc cgttgaattt
    12301 ccagccgacc gagctgttca agctggcagt catcctttat ttggcaagcc tgttcacgcg
    12361 ccgtgaagaa gtgttgcgca gcatggaaag tttgggttgg cagtcgattt ggcgggggac
    12421 ggccaacctg attatgtccg ccaccaatcc gcaggcacgt cgtgaaacat tagaaatgta
    12481 cggccgtttc cgggcgatca tcctgccgat tatgctggtg gcgttcggtt tggtgctgat
    12541 aatggtacag ccggatttcg gttcgtttgt cgtcattacc gtcattaccg ttggaatgct
    12601 gtttctggca ggattgccgt ggaaatattt ttttgtcctg gtaggcagcg tcttgggtgg
    12661 gatggtgctg atgattaccg ccgctcccta ccgtgtgcag cgggtagtgg catttttgga
    12721 cccgtggaaa gacccgcagg gtgccggcta ccagcttacc cactctctga tggcaatcgg
    12781 gcgcggagag tggttcggta tgggtttggg tgcgagtttg agcaaacgcg gctttctgcc
    12841 ggaagcgcat accgatttta tttttgccat catcgctgaa gaattcggct tcttcgggat
    12901 gtgcgtgctg atattctgtt acggctggct ggtggtgcgg gcgttttcca tcggcaagca
    12961 gtcgcgcgat ttgggtttga ctttcaacgc ctatatcgct tcgggtatcg gcatttggat
    13021 cggtatccaa agtttcttca atatcggtgt gaacatcggt gctttgccga ccaaaggtct
    13081 gacgctgccg ttgatgtcct atggcggttc gtcagtcttt ttcatgctga tcagcatgat
    13141 gctgctgttg cgtatcgatt atgaaaaccg ccagaaaatg cgcggttacc gggtggagta
    13201 aatcatgggc ggtaaaacct ttatgctgat ggcgggcgga acgggcggac acattttccc
    13261 agctctggct gtggcggatt cattgcgcgt gcgcggtcat catgtaattt ggctgggcag
    13321 caaggattcg atggaagagc gcatcgtgcc gcaatacggc atacgcttgg aaacgctggc
    13381 gattaaagga atacgcggca acggcatcaa acgcaagctg atgcttccgt ttactctgta
    13441 caaaaccgtc cgcgaagcgc agcggattat ccgcaaacac cgtgtcgagt gcgtcatcgg
    13501 cttcggcggt tttgttacct ttcccggcgg tctggcggcg aaactcttgg gcgtgccgat
    13561 tgtgattcac gagcaaaacg ccgtggcagg cttgtccaac cgccacctgt cgcgctgggc
    13621 gaaacgggtg ttgtacgctt ttccgaaagc gttcagccac gaaggcggtt tggtcggcaa
    13681 ccccgtccgc gccgatatta gcaacctgcc cgtgcctgcc gaacgcttcc aagggcgcga
    13741 aggccgcctg aaaattttgg tggtcggcgg cagtttgggt gcggacgttt tgaacaaaac
    13801 cgtaccgcag gcgttggcac tgctgcctga agaggtgcgc ccgcagatgt accaccagtc
    13861 ggggcgtaac aagctgggca atcttcaggc ggattatgac gcgttgggcg tgaaagcgga
    13921 atgcgtggaa tttattaccg acatggtgtc cgcctaccgt gatgccgatt tggtgatttg
    13981 ccgtgccggc gcgctgacga ttgccgagtt gacggcggcg gggctgggcg cgttgttagt
    14041 gccgtatcct cacgccgttg atgaccatca aaccgccaac gcgcgtttca tggtgcaggc
    14101 agaagcgggg ctgctgttgc cgcaaaccca gttgacggcg gaaaaactcg ccgaaatcct
    14161 cggcagcctc aaccgcgaaa aatgcctcaa atgggcggaa aacgcccgta cgttggcatt
    14221 gccgcacagc gcggatgacg ttgccgaagc cgcgattgcg tgtgcggcgt aaactgccga
    14281 accatgccgt ctgaaaagcc gttcagacgg catggatgtt ttttatttca atccgctata
    14341 tatttgtcag aaaactatgg tgcgcaaacg gtcagacctt taaaataacg cctttacgca
    14401 ctaaaaacca accggaacgc aacattatga tgaaaaatcg agtaagcaac atccattttg
    14461 tcggtatcgg cggcgtcggc atgagcggta tcgccgaagt cttgcacaat ttgggcttta
    14521 aagtttccgg ttcggatcag gcgcgaaatg ccgctaccga gcatttgagc agcctgggca
    14581 ttcaagttta tcccggccat accgcagaac acgttaacgg tgcggatgtc gtcgttgcct
    14641 ctaccgccgt caagaaagaa aatcccgaag ttgtcgctgc gttggagcgg caaattcccg
    14701 ttattccgcg cgccttgatg ctggcagagc tgatgcgctt ccgtgacggc atcgccattg
    14761 ccggtacgca cggcaaaacc acgaccacca gcctgaccgc ctccatcctc ggcgcggcag
    14821 gactcgaccc cactttcgtt atcggcggca aactcaacgc cgcaggcacc aacgcccgct
    14881 tgggcaaagg cgaatacatc gttgccgaag ccgacgaatc cgatgcctct ttcctacatc
    14941 tgaccccgat tatgtccgtc gttaccaata tcgacgaaga ccatatggat acctacgggc
    15001 acagcgtcga aaaactgcat caggcgttta tcgatttcat ccaccgtatg cccttctacg
    15061 gcaaagcctt tttgtgtgtt gacagcgaac acgtccgcgc gattttgccc aaagtgagca
    15121 aaccttatgc tacttacggt ttggacgata ccgccgacat ctacgccacc gacatcgaaa
    15181 acgtcggcgc gcaaatgaaa ttcaccgtcc atgttcaaat gaaaggacat gagcaggggt
    15241 cgtttgaagt cgtgctgaat atgcccggca gacacaacgt gctgaacgca ttggcagcca
    15301 tcggcgtggc gctggaagtc ggcgcatcgg ttgaagcgat ccaaaaaggc ttgctcggct
    15361 ttgaaggcgt cggccgccgc ttccaaaaat acggcgacat caagttgcca aacggcggga
    15421 ccgctttgct ggtggacgat tacggacacc accccgtcga aatggcggca acccttgccg
    15481 ctgcacgcgg cgcgtatccg gaaaaacgtt tggtgctcgc cttccagccg caccgctata
    15541 cccgcacgcg cgatttgttt gaagacttta ccaaagtact caataccgtt gatgcgctgg
    15601 tactgaccga agtttatgcc gccggcgaag agccggttgc cgccgccgac tcccgcgcct
    15661 tggcgcgtgc tatccgcgta ttgggcaaac ttgagccgat ttactgcgaa aacgtcgccg
    15721 acctgccgca aatgctgatg aatgttttac aggatggcga tgttgtgttg aatatgggtg
    15781 cgggaagcat caaccgcgtt ccctccgcgc tgttggaatt gtcgaaacag atttgagata
    15841 cacccgcctg acagacggaa catcatataa aggtcgtctg aaaccgcaat caggtttcag
    15901 acgacctctg acaacaagca taaagcaatt aggaaagaac aaaaacaatg cagaattttg
    15961 gcaaagtggc cgtattgatg ggtggttttt ccagcgaacg agaaatctcg ctggacagcg
    16021 gtaccgccat tttgaacgcc ttaaaaagca aaggcataga cgcatacgcc ttcgacccta
    16081 aggaaacgcc gttatccgaa ctgaaggagc ggggctttca gacggcattc aacatccttc
    16141 acggtactta cggcgaagac ggggctgttc agggtgcatt ggaactgttg ggcattccct
    16201 ataccggcag cggtgtcgcc gcctccgcca tcggcatgga caaataccgc tgcaaactga
    16261 tttggcaggc attgggatta cccgttcccg agttcgccgt actgtacgat gataccgatt
    16321 tcgatgccgt cgaagaaaaa ttgggtctgc cgatgtttgt gaagccggcg gccgaaggca
    16381 gcagcgtcgg cgtggtaaaa gtcaaagaaa aaggccgtct gaaaagcgtt tacgaagaat
    16441 tgaaacacct tcagggcgaa atcattgccg aacgttttat cggcggcggc gaatattcct
    16501 gccccgtcct gaacggcaaa gggctgcccg gcatacacat catccccgca accgagtttt
    16561 acgactacga agccaagtac aaccgagacg acaccattta tcaatgtcct tcggaagatt
    16621 tgaccgaagc cgaagaaagc ctgatgcgcg aactggcggt tcgcggcgca caggcaatcg
    16681 gtgcggaagg ctgcgtgcgc gtcgatttcc tcaaagatac cgacggcaaa ctctatctgt
    16741 tggaaatcaa caccctgccc ggtatgaccg gccatagttt agtaccgaaa tccgctgccg
    16801 ttacgggcgt gggttttgcc gatttatgta ttgaaatttt gaaggccgca catgtgggat
    16861 aatgccgaag cgatggaacg gctgacgcgc tggctgcttg tcatgatggc gatgctgctt
    16921 gctgcgtccg ggctggtttg gttttacaat tcgaatcatc tgcccgtcaa gcaggtgtcg
    16981 ctgaagggca acctggttta ttccgataag aaggcattgg gcagtttggc gaaagaatac
    17041 atccatggga atattttgag gacggacatc aatggcgcac aggaagccta ccgccggtat
    17101 ccgtggattg cgtcggtcat ggtgcgccgc cgttttcccg atacggttga ggtcgtcctg
    17161 accgagcgca agccggttgc acgttggggc gaccatgcct tggtggacgg cgaaggcaat
    17221 gtttttgaag cccgcttgga cagacccgga atgccggtat tcagaggcgc ggaaggaacg
    17281 tctgccgaaa tgctccgccg ttatgacgaa ttttcgactg ttttggcaaa acagggtttg
    17341 ggcatcaaag agatgaccta tacggcacgt tcggcgtgga atgtcgtttt ggacaacggc
    17401 atcaccgtca ggctcggacg ggaaaacgag atgaaacgcc tccggctttt taccgaagcg
    17461 tggcagcatc tgttgcgtaa gaataaaaat cggttatcct atgtggatat gaggtataag
    17521 gacggatttt cagtccgcca tgctcccgac ggtttacccg aaaaagaatc cgaagaatag
    17581 tgggaacagg tatcggacat attacggccg tgccgtctga aacggtgcga cgcaaatttc
    17641 aatcagtttt aagggcagac gaacaatgga acagcagaaa agatacatca gcgtactgga
    17701 tatcggtacg tctaaagtcc tcgcactgat cggggaagtt caagatgacg acaaaatcaa
    17761 catcatcggt ttggggcagg ctccttcacg gggcttgcgt gcgggcatgg taaccaatat
    17821 cgatgccacc gtccaagcca tcaggcaggc ggtcaatgat gccgagctga tggcggatac
    17881 caaaattacc cacgttacca caggtatcgc aggcaaccac atccgcagcc ttaattcgca
    17941 aggtgtggtt aaaatcaaag acggagaagt aacacaggca gacatcgacc gcgccattga
    18001 aacggcaaag gcaatcaata tcccgcccga tcaaaaaatt ctcgatgccg tggttcaaga
    18061 ctacattatc gacacccaac ttggtgtaag ggagcccatc ggtatgagcg gtgtgcgtct
    18121 ggatacgcgg gtgcacatca ttaccggtgc aagtacggca gtgcagaatg tccaaaaatg
    18181 tatcgagctg tgcggcttga aaagcgatca gatcatgctt caaccgttgg caagcgggca
    18241 ggcggtgctg actgaagatg aaaaagacct cggcgtatgc gtcatcgaca ttggtggcgg
    18301 aacgaccgat attgccgttt atatgaacgg cgccatccgc catacgtccg tcattccggc
    18361 cggtggtaat ctgattacca aagatttgtc caaatcgttg agaacacctc tcgatgccgc
    18421 cgagtacatt aaaatccatt atggcgtggc atcatgcgat acggaaggct tgggcgagat
    18481 gattgaagtt ccgggcgtgg gtgaccggac atcgcgtcag gtttccagta aggttttggc
    18541 agcaatcatc agcgcacgta ttcaggagat ttttggcgta gtgctgggcg aactgcaaaa
    18601 atcgggtttc cccaaagaag tgctgaatgc gggtatcgtt ctgaccggcg gtgtgtccat
    18661 gatgaccggg attgtggaat ttgccgaaaa aatcttcgat ttgcctgtac gcaccggtgc
    18721 gccccaagaa atgggcggtt tgtccgaccg tgtccgcaca ccgcgctttt ctaccgctat
    18781 cgggctgctt catgcagcat gcaagctgga aggaaacttg ccgcaaccgg aaaacggtac
    18841 agtgcaagag agagaagggg gcggcggttt gttggcaaga ttgaagcggt ggattgaaaa
    18901 caacctctga acagttggat tgccgtttga caggtgagaa gtattttgcc agcagtaaga
    18961 tacttcttat ataataaata ataatttatt taaaccgtcc tctgaacggg gcgatcagga
    19021 gtttttgaat ggaatttgtt tacgacgtgg cagaatcggc agtcagccct gcggtaatta
    19081 aagtaatcgg cttgggcggc ggcggttgca atgcaatcaa taacatggtt gccaacaatg
    19141 tgcgcagtgt ggagtttatc agtgccaata cagatgcgca gtctttggca aaaaaccatg
    19201 cggcgaagag aatccagttg ggtacgaatc tgacacgcgg tttgggcgcg ggtgcgaatc
    19261 ccgatatcgg ccgtgcggca gcacaggaag atcgggaggc cattgaagaa gccattcgcg
    19321 gtgccaatat gctgtttatc acgaccggta tgggcggcgg taccggtacc ggttccgcgc
    19381 cggttgttgc tgagattgcc aagtctttgg gcattctgac cgttgccgta gttacccgtc
    19441 cgttttctta tgaaggcaaa cgcgtccatg tggcacaggc agggttggaa cagttgaaag
    19501 aatacgtcga ttcgctgatt atcatcccga acgacaaact gatgaccgca ttgggtgaag
    19561 acgtaactat gcgcgaagcc ttccgcgcgg cggacaatgt attgcgcgat gcggtcgcag
    19621 gcatttccga agtggtaact tgcccgagcg aaatcatcaa cctcgacttt gccgacgtga
    19681 aaaccgtgat gagcaaccgc ggtatcgcta tgatgggttc gggttatgcc caaggtatcg
    19741 accgtgcgcg tatggcgacc gaccaggcca tttccagtcc gttgctggac gatgtaactt
    19801 tggatggtgc acgcggtgtg ctggtcaata ttacgactgc tccgggttgc ctgaaaatgt
    19861 ccgagttgtc tgaagtcatg aaaatcgtca accaaagcgc gcatcccgat ttggaatgca
    19921 aattcggtgc cgctgaagac gagaccatga gcgaagatgc catccggatt accattatcg
    19981 ctaccggtct gaaagaaaaa ggagcggtcg atcctactcc ggcaagggaa gtagaagcgg
    20041 ttgccccgtc caaacaggag caaagccaca atgtcgaagg tatgatccgc accaatcgcg
    20101 gtatccgcac catgaatctg acagcagcgg atttcgataa ccagtctgtc cttgacgatt
    20161 ttgaaattcc tgcaattttg cgtcgtcaac acaattcaga caaataatgt gccgtctgcc
    20221 gtaaacttat tgcctcccga accggttttc ccgatttggg aggtatattt ttcaatatgc
    20281 cgaatcctgt gcggtttgcg gtgtgcgggt tcagattttt tacttgaaac ggactgctag
    20341 atatggatat ttcaaaacaa acattgctgg atagggtttt taacctgaag gcaaacggta
    20401 cgacggtacg taccgagttg atggcgggtt tgacgacctt tttgacgatg tgctacatcg
    20461 ttatcgtcaa tcccctgatt ttgggcgaga ccggaatgga tatgggggcg gtattcgtcg
    20521 ctacctgtat cgcatccgcc atcggctgtt ttgtcatggg ttttatcggc aactatccga
    20581 ttgcgcttgc cccggggatg gggctgaatg cctatttcac ctttgccgtc gttaagggta
    20641 tgggcgtgcc ttggcaggtg gcgttgggtg cggtgttcat ttccggtctg attttcatcc
    20701 tgttcagctt ttttaaagtc agggaaatgc tggtcaacgc actgcctatg ggtttgaaaa
    20761 tgtcgattgc cgccggtatc ggtttgtttt tggcactgat ttccctgaaa ggcgcaggca
    20821 ttatcgttgc caatccggca accttggtcg gcttgggcga tattcatcag cccagcgcac
    20881 tgttggcatt gttcggtttt gtcatggtgg tcgtattggg gtatttccgc gttcaaggcg
    20941 caatcatcat caccattctg acgattaccg tcattgccag cctgatgggt ttgaacgagt
    21001 ttcacggcgt ggtcggcgaa gtaccgggca ttgcgccgac ctttatgcag atggatttta
    21061 aaggtctgtt taccgtcagc atggtcagcg tgattttcgt cttcttcttg gtcgatttgt
    21121 ttgacagtac cggaacgctg gtcggcgtat cccaccgtgc cggactgctg gtggacggta
    21181 agctgccccg cctgaaacgc gcactgcttg cagactctac cgccattgtg gcaggtgcgg
    21241 ctttgggtac ttcttcaacc acaccttatg tggaaagcgc ggcgggcgta tcggcaggcg
    21301 gacggaccgg cctgacggcg gttaccgtcg gcgtattgat gctggcgtgt ctgatgttct
    21361 ccccattggc gaaaagtgtt ccggtatttg ccaccgcgcc cgcactgctt tatgtcggca
    21421 cgcagatgct ccgcagtgcg agggacattg attgggacga tatgactgaa gccgcgcccg
    21481 cgttcctgac cattgtcttc atgccgttta cctattcgat tgcagacggc atcgccttcg
    21541 gcttcatcag ctatgccgtg gtcaaacttt tgtgtcgccg gactggggac gtgccgccta
    21601 tggtatgggt tgttgccgta ttgtgggcat tgaaattctg gtatttgggc tgattgattc
    21661 gatat
//
LOCUS       DAXFZM010000027        21515 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.027, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000027 DAXFZM010000000
VERSION     DAXFZM010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21515)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21515)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21515
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.027"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            36..248
                     /locus_tag="ACFJAG_000872"
     CDS             36..248
                     /locus_tag="ACFJAG_000872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HFC3980212.1"
                     /translation="MELGYTPYNLRTLRNRCKLTQAELAQIVGVKHYIQVGRWEAEPD
                     TETRRADMPLEKWRQFLDWIEKTNAV"
     gene            433..933
                     /locus_tag="ACFJAG_000873"
                     /pseudo
     CDS             433..933
                     /locus_tag="ACFJAG_000873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238080.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
     gene            930..1256
                     /locus_tag="ACFJAG_000874"
     CDS             930..1256
                     /locus_tag="ACFJAG_000874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPW/gp25 family protein"
                     /protein_id="HFC3980213.1"
                     /translation="MTDAENGRGQDTLAHIAQSIRNILFTRIGTRLMREEYGSFIPDL
                     IDMPAGHAAIALIHQAAVTALARWKPRITVRRIQADTADLAAGKIKLTLDVTLADGGE
                     RTYRIK"
     gene            1517..1987
                     /locus_tag="ACFJAG_000875"
                     /pseudo
     CDS             1517..1987
                     /locus_tag="ACFJAG_000875"
                     /inference="COORDINATES: protein motif:HMM:NF016736.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
     gene            2163..2726
                     /locus_tag="ACFJAG_000876"
     CDS             2163..2726
                     /locus_tag="ACFJAG_000876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HFC3980214.1"
                     /translation="MNSTVPANNSPLQHALAKLTERETAAVSRQLDPARCDPGFLPFH
                     AFARSIGTEEGWDFAETDEARRNLIAGFAEIHARKGTPYAIRALFPILRLGEIQIIER
                     DGEFKWDGSVLFDGSRTFGRREGDWAEYRIVLTRPVSIRQTARIRAMLAEIAPLRCEL
                     TALDYRNHPHRWNGKIRFNGEYGFGTT"
     gene            2766..5035
                     /locus_tag="ACFJAG_000877"
                     /pseudo
     CDS             2766..5035
                     /locus_tag="ACFJAG_000877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238084.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber protein"
     gene            5134..5463
                     /locus_tag="ACFJAG_000878"
     CDS             5134..5463
                     /locus_tag="ACFJAG_000878"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980215.1"
                     /translation="MPRQSCHSSPFPRKRESGTQTRQESIGKNNPTAVIPAQAGIQTH
                     NVKAVYQKKPKPNALDFRLRGNDEELGSDERREQPRKKPPTPSDGIGNKNRTAETARE
                     RIAGRAR"
     gene            complement(5479..5790)
                     /locus_tag="ACFJAG_000879"
     CDS             complement(5479..5790)
                     /locus_tag="ACFJAG_000879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HigA family addiction module antitoxin"
                     /protein_id="HFC3980216.1"
                     /translation="MKMHNPAHPGLVLKEYINGASITDIAKRLGVSRVALSRIVNAQS
                     SITPEMAVRLSQLLNTSPDFWLNMQAGYDLWQIRQRKTFDIAPLFPEPPLSSMKTGAR
                     T"
     gene            complement(5798..6077)
                     /locus_tag="ACFJAG_000880"
                     /pseudo
     CDS             complement(5798..6077)
                     /locus_tag="ACFJAG_000880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238085.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
     gene            6162..6776
                     /locus_tag="ACFJAG_000881"
     CDS             6162..6776
                     /locus_tag="ACFJAG_000881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980217.1"
                     /translation="MTIYFKNGFYDDTLGSVPEGAVAVGGEEYAALFAGQAQGGQIAA
                     DSDGRPVLTPPRPSEYHEWDGKKWKISKAAARFANSRFAKQKNRLGIQPRGKGGRTQN
                     SLLAGYPQVEIDSFYRQEKETLAWQADNDAPTPMLAQIAAARGIELDVLIGKVVEKPA
                     RLAVAVDAIIGKRQQLEDRLNTIETAPALDALEREIKEWALNVG"
     gene            6755..6919
                     /locus_tag="ACFJAG_000882"
                     /pseudo
     CDS             6755..6919
                     /locus_tag="ACFJAG_000882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222488.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase UvrD"
     gene            7020..7154
                     /locus_tag="ACFJAG_000883"
                     /pseudo
     CDS             7020..7154
                     /locus_tag="ACFJAG_000883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222488.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase UvrD"
     gene            complement(7238..7621)
                     /locus_tag="ACFJAG_000884"
     CDS             complement(7238..7621)
                     /locus_tag="ACFJAG_000884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HFC3980218.1"
                     /translation="MIYYPAVLFQDPDQSNWGVIIPDLPGCYPVGDTVADALADAKAA
                     AMFHLEGLLQENLPIPEAQSIEVNRDNPDYADAVLWTMVEADDAALTGQVRFNVSWPQ
                     HILNRVDACTAARHETRAVFWRKPP"
     gene            complement(7726..7881)
                     /locus_tag="ACFJAG_000885"
     CDS             complement(7726..7881)
                     /locus_tag="ACFJAG_000885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980219.1"
                     /translation="MAETVMPEYRNWQNGLDAKCADGDEYGVAQSDCRTREINAKTKE
                     IQGYLID"
     gene            complement(7911..8363)
                     /locus_tag="ACFJAG_000886"
     CDS             complement(7911..8363)
                     /locus_tag="ACFJAG_000886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1311 domain-containing protein"
                     /protein_id="HFC3980220.1"
                     /translation="MALIKEPLDKAKQRNEKLEAAEATAQEAREAEEAAAQEALGREQ
                     EAARVSEWEERYKLSRSEFEQFWKGLPQTVQNKLQASQKTWKSGMDKICANNAKAEGE
                     TPNGIKVSELACKTAETEARLEELHNRKKALIDEMVREEDKKELPKRL"
     gene            complement(9141..10787)
                     /gene="pgi"
                     /locus_tag="ACFJAG_000887"
     CDS             complement(9141..10787)
                     /gene="pgi"
                     /locus_tag="ACFJAG_000887"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004347 - glucose-6-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HFC3980221.1"
                     /translation="MKHLHDLPAWSKLWNHFDDSKTLHMREMFEQDPQRAERYWLQVG
                     GLTLDYSKNRINDETMSLLFELAREAGVPERMRQMFHGEKINTTENRAVLHVALRNRT
                     NSPIMVDGEDVMPKVNRVLQRMGEFAHEVRSGSWLGYTNQVITDVVNIGIGGSDLGPL
                     TMCTALKPFGHPRLNMHFVSNVDGSQLRDVLSKVHPETTLFIIASKTFTTQETLTNAL
                     TAREWFLNHAGDEEAVAKHFAAVSTNRKAVAEFGIDIANMFEFWDWVGGRYSLWSAIG
                     LPIMLYLGEENFIEMLNGAHLMDQHFINTPLERNLPVILALIGIWYINYYGGGSHVIA
                     PYDQHLHRLPKFIQQLDMESNGKQVTLDGKAVGHETSPIIWGETGINGQHAFFQLLHQ
                     GTHITPIDLIASLEKRSNLPGHHEILLANVFAQAEAFMCGKTPDEVRAELKAQGMDEA
                     RIEELVPHKTFSGNRPTNLILMDKVNPRNMGSLIAMYEHKTFVQGIIWGINSFDQWGV
                     ELGKQLAKTILGELTGETEPQKHDSSTERLINLYLQTNRK"
     gene            complement(11013..11861)
                     /gene="hexR"
                     /locus_tag="ACFJAG_000888"
     CDS             complement(11013..11861)
                     /gene="hexR"
                     /locus_tag="ACFJAG_000888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator HexR"
                     /protein_id="HFC3980222.1"
                     /translation="MLSKISESLADLSGAERKVAECALAEPKWFVHAAVAEIADRASV
                     SQPTVIRFCRSLGYKGLPEFKLSLSASIGHEGMPYVHEELNADDDMANVVEKVLGNAA
                     AALLGERRFLKESELENGIATLMHARRVEFYGVGNSGIVAQDAQHKFFRFGMSTVAYV
                     DTHTQLMAASVLSDQDVLVAISNTGSSIELLDAVSIAKENGASVIALTRNDSPLAQLA
                     DCVLSVATQENAELYTPMVSRLLQLAVIDILAIGLALRLGDAASLQLQKSKKSIHNKH
                     IDYDKD"
     gene            complement(11910..12896)
                     /locus_tag="ACFJAG_000889"
     CDS             complement(11910..12896)
                     /locus_tag="ACFJAG_000889"
                     /EC_number="2.7.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004340 - glucokinase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005536 - D-glucose binding [Evidence
                     IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0051156 - glucose 6-phosphate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucokinase"
                     /protein_id="HFC3980223.1"
                     /translation="MSSTPNKHADYPRLVADIGGTNARFALETAPCVIEKVAVLPCKE
                     YDTVTDAVRAYLNQSGATGVRHAAFAIANPILGDWVQMTNHHWAFSIETTRQALGLDT
                     LILLNDFTAQALAVTQTSSKDLMQVGGQKPVEFAPKAVIGPGTGLGVSGLVHSPAGWV
                     ALAGEGGHTSFPPFDDMEVLIWQYAKNKYRHVSAERFLSGAGLSLIYETLAAKQKAEP
                     AKLMPSEITEKALNCESPLCRQALDIFCAMLGTVASNLALTLGARGGVYLCGGIIPRM
                     LDYFKTSPFRSRFENKGRFEAYLAAIPVYVVLSEFPGIAGAAAALGNHLKNV"
     gene            complement(12877..13572)
                     /gene="pgl"
                     /locus_tag="ACFJAG_000890"
     CDS             complement(12877..13572)
                     /gene="pgl"
                     /locus_tag="ACFJAG_000890"
                     /EC_number="3.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017057 - 6-phosphogluconolactonase
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="HFC3980224.1"
                     /translation="MFVWHEYENAAEAAQSLADAVADALQGALDEKGGAVLAVSGGRS
                     PIAFFNALSQKDLDWKNVGITLADERIVPTNHADSNTGLVREYLLKNKAAAAVWIPMV
                     EDGKTETELHPDAVVDYALKHYKQPDVLILGMGNDGHTASIFPKAPQFQTAIDGSAGV
                     ALVHTTPVTAPHERISMTLDAIAHTGHVFLAIQGEEKKAVFDQAAQGENREYPISLVL
                     NHQGVNCHVFYAE"
     gene            complement(13723..15168)
                     /gene="zwf"
                     /locus_tag="ACFJAG_000891"
     CDS             complement(13723..15168)
                     /gene="zwf"
                     /locus_tag="ACFJAG_000891"
                     /EC_number="1.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004345 - glucose-6-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0006006 - glucose metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HFC3980225.1"
                     /translation="MSTQTNFDLVLFGATGDLAMRKLLPCLYQAHVAGLLHPEGRILG
                     VSRSELDTEGFLAKVETSSKIHVKENFSGEAWASFVERLAYLKVDVTQPDDFAALGDL
                     VKARKETDNVVIYLSTAPKFFAQACENLAAIGLNADNVRVVLEKPLGTDLASSQQINT
                     DVARYFKEGQIYRIDHYLGKESLQNLLALRFANVMFEPLWNNKYIESVQLTIAEQLGV
                     EERGEFYDITGALRDMVQNHLMQMLCMTAMEAPASLDADAVRDEKVKVIKSLKPLTIE
                     SVNENVVRGQYTAAKGMNGYLEEINVPQDSFTETYVAIKAEIENERWKGVPFYLRTGK
                     RMAGKVAEIVLNFRPLQNHIFDNSQTAPNRLVIELQPNESVRLYTQVKTPGAGNKVEV
                     TPLGVDLGKAVEGRRAEAYERLLLDVINGKLALFNRRDELEAAWEYVMPILENWANNT
                     TPPHGYGAHSWGPEAARELLARDGNKWHEEQ"
     gene            15486..15604
                     /locus_tag="ACFJAG_000892"
                     /pseudo
     CDS             15486..15604
                     /locus_tag="ACFJAG_000892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            15688..17523
                     /gene="edd"
                     /locus_tag="ACFJAG_000893"
     CDS             15688..17523
                     /gene="edd"
                     /locus_tag="ACFJAG_000893"
                     /EC_number="4.2.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004456 - phosphogluconate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009255 - Entner-Doudoroff pathway through
                     6-phosphogluconate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphogluconate dehydratase"
                     /protein_id="HFC3980226.1"
                     /translation="MNHTPIHPKLAEITGRIIERSRPTREKYLAKIRSAKQMGRLERN
                     QLGCSNLAHGYAAMPKSIKIEMLQETVPNLGIITAYNDMVSAHQPFKDFPDQIKDEAQ
                     KNGATAQVAGGTPAMCDGITQGYAGMELSLFSRDVIAMSTAVGLSHQMFDGSLFMGVC
                     DKIVPGLMIGALSFGHIPGIFVPAGPMSSGIGNKEKARTRQLFAEGKVGRDELLKSEM
                     GSYHSPGTCTFYGTANSNQMMMEMMGVHLPAAAFVHPYTDLREALTRYAAGHLARGIK
                     NGTIKPLGEMLTEKSFINALIGLMATGGSTNHTMHLVAMARAAGVILNWDDFDEISSI
                     IPLLIRVYPNGKADVNHFTAAGGLPFVIRELLDAGLLHDDVDTVVGHGMRHYTKEPFL
                     IDGKLEWREAPETSGNDDILRKADNPFSPDGGLRLMKGNIGRGVVKVSAVREGCRIIE
                     APAIVFNDQREVLAAFERGELERDFICVVRYQGPRANGMPELHKLTPPLGILQDRGFK
                     VALLTDGRMSGASGKVPASIHMTPEALMGGNIAKIRTGDLIRFDSVTGELNVLINEAE
                     WNVREVERIDLGANQQGCGRELFAGFRSMTSSAETGAMSFGGEFA"
     gene            17732..18370
                     /locus_tag="ACFJAG_000894"
     CDS             17732..18370
                     /locus_tag="ACFJAG_000894"
                     /EC_number="4.1.2.14"
                     /EC_number="4.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA];
                     GO_function: GO:0016832 - aldehyde-lyase activity
                     [Evidence IEA];
                     GO_function: GO:0016833 - oxo-acid-lyase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 4-hydroxy-2-oxoglutarate
                     aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase"
                     /protein_id="HFC3980227.1"
                     /translation="MSKLTPREILTAGAVVPVMAIDDLSTAVDLSRALVEGGIPTLEI
                     TLRTPVGLEAIRLIAKEMPNAIIGAGTVTNPEQLKAVEDAGAVFAISPGLHESLARAG
                     RNSGIPLIPGVATPGEVQLALEHGIDTLKLFPAEVVGGKAMLKALYGPYADVRFCPTG
                     GISLATAPDYLALPNVLCVGGSWLTPKEAVKNKDWDTITRLAKEAAALKPKA"
     gene            complement(18559..18744)
                     /locus_tag="ACFJAG_000895"
     CDS             complement(18559..18744)
                     /locus_tag="ACFJAG_000895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980228.1"
                     /translation="MGYFGGNGGYLKRKQPKNLWLDVGCLKKRNFAKVSERYFLTTVN
                     LLVSAAHHGILPIGRFL"
     gene            complement(18755..18867)
                     /locus_tag="ACFJAG_000896"
                     /pseudo
     CDS             complement(18755..18867)
                     /locus_tag="ACFJAG_000896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(18965..20005)
                     /locus_tag="ACFJAG_000897"
     CDS             complement(18965..20005)
                     /locus_tag="ACFJAG_000897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent alcohol dehydrogenase family
                     protein"
                     /protein_id="HFC3980229.1"
                     /translation="MKAMVYHGANDIRFEEKPRPQIIDPTDAVVKIVKTTICGTDLGI
                     WKGKNPEVADGRILGHEGIGIVEEVGEAVKNIKVGDKVIISCVSKCCTCDNCKIQLYS
                     HCRNGGWILGYMIDGTQAEYVRTPYADNSLVPPHDNVNEEIALLLSDALPTAHEIGVQ
                     YGDVKPGDTVFIAGAGPVGMSALLTAQLYSPAAIIVCDMDENRLKPAKELGATHTISP
                     ASGDVSKQVFAIVGEDGVDCAIEAVGIPATWNMCQDIVKPGGHIAVVGVHGQSVDFKL
                     EKLWIKNLAITTGLVNANTTEILMKAIFSSSVDYTKMLTHRFKFSQLEKAYDVFKHAA
                     ENQAMKVVLEAD"
     gene            20168..21208
                     /gene="mutY"
                     /locus_tag="ACFJAG_000898"
     CDS             20168..21208
                     /gene="mutY"
                     /locus_tag="ACFJAG_000898"
                     /EC_number="3.2.2.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HFC3980230.1"
                     /translation="MNTPIPFSERLIRWQKQHGRHHLPWQVKNPYCVWLSEIMLQQTQ
                     VAAVLDYYPRFLEKFPTVQTLAAAPQDEVLSLWAGLGYYGRARNLHKAAQQIVGQFGG
                     TFPSERKDLETLCGVGRSTAAAISAFAFNRRETILDGNVKRVLCRVFAQDGNPQDKKF
                     ENSLWTLAESLMPSENADMPTYTQGLMDLGATVCKRTKPLCRQCPMADICEAKKQNRT
                     AELPRKKTALEVQTLPLYWLIVRNRDGAILLEKRTAKGIWGGLYCVPCFESLNGLSDF
                     AAKLSLTMADMDEQTALTHRLTHRLLMITPFEGQMPSEHHSDGIWIKPGHLKDYGLPK
                     PLEIYLNGNRLE"
BASE COUNT         5220 a         6377 c         5414 g         4504 t
ORIGIN      
        1 caaaaaatat gcgaaacaaa ataaaccgca acgacatgga actcggctac acgccttaca
       61 accttcgcac cctgcgcaac cgctgcaaac tgacacaggc cgagttggcg caaatcgtcg
      121 gggtgaagca ctacatacag gtaggccgct gggaagccga acccgatacc gaaacgcggc
      181 gggccgatat gccgctggaa aaatggcggc agttcctcga ttggatagaa aaaacaaacg
      241 ccgtctgaaa ccttcagacg gcatttttta cccaccccca aacctaaaaa ccacaaccaa
      301 gccctacacc gcttgccccc acctcgccgc cgccccaaaa taacctcact ctgttggaag
      361 cctgccggaa acggcaaaag ccgccccgtt ccgccattac ggggcggttt cccacatcaa
      421 gacgagacag aaatgaccga ccgccaaata gacaacctca tcaaacccgc caccatcgcc
      481 gacaccgacc ccgcgtccgc gcacaacacg gcggcattac caccgactgg ctgccctata
      541 tcgtcccctt tgcaggcggc gtgtcagtat ggcgcatccc aagtgtcggc gaagcctgca
      601 ccatcttatc ccctgccggc gaacccgaga acggcgtagt tttatgctgc caagcctccg
      661 accgataccc cgccccgtcc gccgaccccg ccgaaaccgt cgtccgattt catccgctac
      721 aaccacaaca gcggcgcgat ggaattaaaa gccgttacaa gcctgaccat cgacaccccc
      781 caaaccacca taaccggaca cctgaccgtc aaccaaacca ccaccgccca agggctgctg
      841 acctaccaaa atggcatgaa cggccaaggc ggcagcctgt ccgagcacac ccaccccgac
      901 gactccggcg gtacaacgga aaaaccccaa tgaccgacgc agaaaacgga cgcgggcaag
      961 acaccctcgc ccacatcgcc caatccatcc gcaacatcct gttcacaaga ataggaacgc
     1021 ggctgatgcg cgaagaatac ggcagtttta ttcccgactt gatcgatatg cccgccggtc
     1081 acgccgccat cgccctcatc caccaagccg ccgttaccgc cctcgcaaga tggaaacccc
     1141 gcataaccgt ccgccgcata caggcagaca ccgccgacct cgccgccggc aaaatcaaat
     1201 taaccctaga cgtaaccctt gccgacggcg gcgaacgaac ctaccgcatc aaataataaa
     1261 aacaacagga taaacaatgg gaaacagccg attaagccaa ctccccgcgc ccgccgccat
     1321 cgaagaaacc gactttgagg gcatcttcgc gcgcaaaaaa gccgccctca ccgccctatg
     1381 tcccgaaagc atccgcgaaa ccgtcgccca aaccctcgaa ttagaatcag aacccctaac
     1441 catcgacctg caacagcaag cctatcaaga gctgctcgtc cgcaaccgca tcaacgaagc
     1501 cgtcaaagcc aacctcttgg catacgcaca aggcagcgac ctcgaccaca tcgccgccca
     1561 atacggactt tcacgcaaaa ccatccgcgc cgccgacccc gacgcgaacc cgccggttgc
     1621 cgccgaatac gaaaccgacg acgcattccg cgcccgcgtc caagcccatc ccgaaaaata
     1681 cgccgccggg ccgcgcaccg catacgaagc ccacgccatc gacgcacacc cccaaatcac
     1741 acacgcccgc gccgtgcgcc gcgccgtcgg cacggtggag gtttacatca aaacccaaag
     1801 cggcacgccc gacgaaacca ttttgaccgc cgcgcgcgaa tacctgcccg ccgaaacacg
     1861 ccgccccctt tgcgacaacg tgcaagtaac cgccgcccaa cccaaagacg cggcagtaga
     1921 gtattccgcc gaataccacc ccgccgccaa tattcaagcc gaacggcaga ccgcctgcga
     1981 agccttggat aacctatggc ggcaaaacgc ccacatcggc gcatccgtcg ccctgtctaa
     2041 aatcatcggc gcgttagaca cccccggcgt gaaaaaaaat cacactgcac agccccgctg
     2101 ccgacatcga atgcggcaac ggcgaataca tccgaatcac gtccacgctc gagcgcgaat
     2161 aaatgaacag caccgtcccc gcgaacaaca gccccctgca acacgcactg gcaaagctga
     2221 cagaacgcga aactgccgcc gtctcccgcc aactcgaccc cgcccgatgc gaccccggat
     2281 ttttaccctt tcacgccttc gcaagaagca tcggcacgga agagggctgg gactttgccg
     2341 aaaccgacga agcccgccgc aacctcatcg caggctttgc cgaaatccac gcccgaaaag
     2401 gcacgccgta cgccatccgc gccctcttcc ccatcttgcg gctgggcgaa atccaaatta
     2461 tcgaacgcga cggcgagttc aagtgggacg gctcggtctt gttcgacggc agccgcacat
     2521 tcggcaggcg cgagggtgac tgggcggaat accgcattgt cttaacgcgc cccgtcagca
     2581 tccgccaaac cgcccgcatc cgcgccatgt tggcggaaat cgcccccttg cggtgcgaac
     2641 ttaccgcgct cgactaccgc aaccatcccc accgctggaa cggcaaaatc cgctttaacg
     2701 gcgaatacgg tttcggcacg acataacgcg cccccgaaaa tcaacaaaca aaaggaagcc
     2761 ccaaaatggc aaacgcaacc gaacaaaacc aattcgacca agccgtccgc ctcatcgaac
     2821 ccggcgacag cgtcgtcgtc ggcccaggcg cgcccgtcaa ccaaccactg caagccctcg
     2881 ccaaccgcac ccttttgctc aaaaaccaaa ccgaagccct tcagacggca tccgacacca
     2941 aagccgccgc aagcaccgcc gtcaacgcag gcgacggact gacgggcggc ggcagccttg
     3001 cccaaagccg caccatcgca ctgggcgcgc ccgggcaaat caccgcaaca agccaaaaca
     3061 ccgtcccaaa aaacggccac acccacgcca tcgacaccgc acgcaccgac cgcgccggca
     3121 tcgtccgatt agacaatgcc attagcgaag ccgaagacac cgccgccacc cccaaagccg
     3181 tcaaaaccgc gctcgaccaa gcccgcgccg ccgccgcgac cgccgacctc aaagtctccc
     3241 tctccgacaa ccaaaccgtt accggccaaa aaaccgttac cggccaaaaa acctttaccg
     3301 ccgaaacaca attccaaagc ggcatccggc tgtccgccaa cccgacgcac tgaaacggcg
     3361 gctacaaagc ctatatcggc gcggataacg aaaacgccca catcgtcttc ggcgacgaca
     3421 ccctgcgcct gcacggcgca aataaccgca tttcctacaa caaccacgac atcttccaca
     3481 aagccaacaa accgcgtttc aacgaagaca tcgaaggcaa accgaacacg ctgtccggct
     3541 acggcatcgg caacttcaaa gtcgaaacat tccggggcga tttgaacagc ctcaaaaccg
     3601 acggcgtcta ttccctgccg acggcggtcg gcagctcgaa cctgcccgtt gaaaacaccg
     3661 cctgccatat ccaagtcatc gccggcacgc aacccggctg gtgcaggcag ttgggctatc
     3721 ccgcctacac gtccgacgtg tacgaacgct accagaccag cagcgcaaac gacgactgga
     3781 gcgcgtggaa aaaactcaat tcggaaggca tccccgccgg cgcgatcgtg tcctttccca
     3841 aagccgtccg aaaccccgca ggctatctca aagccgacgg cacgatcttt gcacaaaaca
     3901 ccttctcgac ctttaccgcg ccctgggcaa cacaaacaaa ctgcccgacc tgacccgtac
     3961 cgacatcggc atcaccgcgt ggtttccgtc cgaccaaatc cagacgggct ggctggcgtt
     4021 tgacgacatc cgagagcgcg taaccgaatc ggcttatccc gaactttacc gcctgctgac
     4081 cgaaaaatac ggacgcatcc aaaacgtccc gcaggcggaa gaccgcttta tccgcaacgc
     4141 gggcaacggc ttggcggtcg gaacgaagca ggaagacgaa atcaaacggc acgtccacaa
     4201 agtattttca cactgggcaa accacccaga cgccgccgcc gtcggttacg aagaccgcaa
     4261 tgaaaggcaa agaagcgcgc tcgtatcgac ttggacggac ggcgacttaa acgacaacgg
     4321 ctttttaacc ccgcgattgg acagcaaaat ggcaacgggc ggcgcagaaa accgccccaa
     4381 agccctggtt ttaaaactgt gcatcaaagc cgccgacacc ttgggcgaag ccgtgttccg
     4441 gataaagtcc cacggcgaaa ccgccaacgt cggcgcactg gacgcgtcaa ggctggcgca
     4501 aggtttgcag gaaaaagccg accgcgacca cacccacacc accgcccaaa tccaagggct
     4561 ggacgaaaaa atcagcgccg ccgttgccgc gcaattcaca cgccaaacca tcggcggcgt
     4621 ggatattgtc agattccccg acggcacaat gatacagacc ggcagttaca ggtttgcaag
     4681 aggcggcagc cccataggaa acgaagttgt cttccccatc gcctttgccg acggcaacgt
     4741 caaatgcttc gtatccgaac gccattcggg acgcgtcaac ggcgaaaggc aacacaactg
     4801 gctgtttatc cgcgcaaaaa accacgccgc cgccattatt accaactggt acgaaagcag
     4861 ttgcgactgg atggccatcg gcaaatccgc ctcgggaaac gccgccagcc ccaccccgat
     4921 agtccccgaa atacctgaaa tcgatgaaga accgcaaaga gagagtggaa gatcatcaac
     4981 cggactccga aacccccgcc gccaccgagg cctcgacttc cccgtggggt cgtaagacta
     5041 gcgggcggca gggcaggctg tagagacggg cttcagccca ccgatccaag caatccgacc
     5101 gaaaccggcc gcgccgccaa tcctgcgaaa cctatgcccc gccaatcctg ccactcttcg
     5161 ccattcccgc gaaagcggga atccggaacc caaacgcggc aggaatctat cggaaagaat
     5221 aacccgaccg ccgtcattcc cgcgcaggct ggaatccaga cccacaacgt taaggcggtt
     5281 tatcagaaaa aaccgaaacc gaacgcccta gatttccgcc tgcgcgggaa tgacgaagag
     5341 ttggggagtg acgaaaggcg ggaacaaccg cgcaaaaagc cgccgactcc ttcagacggc
     5401 atcggcaata aaaaccgcac ggccgaaacc gcgcgggaaa ggatagccgg gcgcgcccga
     5461 taagcagcgg ccgcagggtt aagtccttgc acctgttttc atcgaagaca aaggcggttc
     5521 gggaaataag ggcgcaatat caaaagtttt gcgttgcctg atttgccaca aatcataacc
     5581 ggcctgcata ttcagccaaa aatcaggcga agtgttgagc agttggctta aacgaaccgc
     5641 catctcgggc gtaatcgaag attgggcgtt gacaatgcgc gataaggcaa cccggctgac
     5701 acccaggcgt ttcgctatat cggtaatgct tgcgccgtta atatactctt ttaaaacaag
     5761 gcccgggtgg gcaggattgt gcattttcat attattccta gtgataatcc tgataatcga
     5821 caacttcgac attgccgtcg ttgaaacgaa aagtcaaacg ccaatttccg ttgactttga
     5881 accgcccaat gtcccgacaa actgcccttg aggggatgaa gattccaact cggcacagcc
     5941 atatccgaag gcgtttgcgc ggcattcagc gcggttagaa gcagattcag tttgacggaa
     6001 tgcccggctt ggatgcccga tagcgagcct gttttaaaaa agcgttcaag ccctttgtgt
     6061 ttgaaagaaa caatcatcat cccaccccgt ctgtatcgcc aaaggataca aaacttttat
     6121 ttgattgcaa agcgacgata tacaaaaaag gaaaccccga aatgaccatc tatttcaaaa
     6181 acggctttta cgacgacaca ttgggcagcg tccccgaagg cgcggttgcc gtcggcggcg
     6241 aagaatacgc cgccctcttc gcaggacagg cgcagggcgg gcaaattgcc gccgattccg
     6301 acggccgccc cgttttaacc ccgccgcgcc cgtccgagta ccacgaatgg gacggcaaaa
     6361 aatggaaaat cagcaaagcc gccgcccgtt tcgccaactc ccgtttcgcc aaacaaaaaa
     6421 accgccttgg cattcagcct cgcggaaaag gcggacgaac tcaaaacagc ctcttggcgg
     6481 gctatcccca agtggaaatc gacagctttt acaggcagga aaaagaaacc ctcgcgtggc
     6541 aggcggacaa cgacgccccg accccgatgc tggcgcaaat cgccgccgca aggggcatag
     6601 aattggacgt tttgattgga aaggttgtcg aaaaacccgc ccgcctggcc gttgccgtcg
     6661 acgcgattat cggaaagcgg cagcaacttg aagatagatt aaataccatc gaaaccgcgc
     6721 cagcattaga tgcgttagaa agggaaatca aagaatgggc gctaaacgtc ggctgagaga
     6781 atatatttat catctactag tggccataga ccaactgttc aacgctataa ccggcggcgc
     6841 ggcagacgaa accctctcaa gtcgcaccta tcgcggcgcg cggctcgccc aacaacccaa
     6901 aacccgctgg aagattttat agtggattaa caaaaatcag gacaaggcga cgaagccgca
     6961 gacagtacaa atagtacggc aaggcgaggt aacgccgtac cggtttttgt taatccacta
     7021 tatataccct gatcaacggc gtatttttcg accgccacca ctgccggcag gcgtatatca
     7081 gcgaactgaa aggcaggcag cacgacgcgc ggttcaacca aagccgcgcc gccaatgaaa
     7141 gggatacgcg gtaaaattgc cgccgcgccg cattcagacg gcatcggcaa taaaaaagcc
     7201 cgaaaaaatc gggctgaaag ttaaggctgc atcgccttta aggcggcttt cgccaaaaaa
     7261 ccgctcgggt ttcatgacgg gcggcagtgc aggcatcgac acggttgagg atatgttgcg
     7321 gccaactgac gttaaaccgc acctgtccgg ttaatgcggc atcgtccgct tcaaccatcg
     7381 tccacaacac cgcatcggca taatcgggat tgtcccgatt aacctctatg ctttgcgcct
     7441 cgggaatcgg caggttttcc tgcaaaagcc cttcgagatg gaacattgcg gcggctttgg
     7501 catcggcaag cgcgtcggca accgtatcgc cgacaggata gcagcccggc agatcgggaa
     7561 taatcacgcc ccagttgctt tgatcggggt cttggaacag cacggcggga tagtaaatca
     7621 ttacttcctt tctcggatat gtggtatcgg caaagtccaa acgcaacgaa ggggatttaa
     7681 aaacgacaaa aacgcaaaag ccgccgacat tcccgcatcc aagtttcagt caatcagata
     7741 accttggatt tctttggttt tcgcattgat ttctctggta cggcagtcag attgtgccac
     7801 cccgtattcg tcgccgtcgg cgcatttggc atccaaaccg ttttgccagt tgcggtactc
     7861 gggcataacg gtttcggcaa tatcggcggg cagtgcctga accgcgctgt tcagagccgc
     7921 tttggcagtt ctttcttgtc ctcttccctg accatttcgt cgataagggc ttttttacgg
     7981 ttgtgcagct cttccaagcg tgcttcggtt tctgccgttt tacacgccaa ctcactgact
     8041 tttatgccgt ttggcgtttc accttcggct ttcgcattgt tggcacagat cttgtccata
     8101 ccgcttttcc atgttttctg cgaggcttgc agcttattct gtacagtttg aggcaatcct
     8161 ttccaaaact gctcgaactc gctgcgcgac agcttgtagc gttcttccca ttcggatacg
     8221 cgggcggctt cctgctcccg acccaatgcc tcctgcgccg ccgcttcttc tgcctccctc
     8281 gcttcctgcg cggtggcttc tgccgcttca agtttttcgt tcctttgttt cgctttgtcc
     8341 aacggctctt taatcagtgc catagacacc agctcgctga gcggatggat gatatcgtgt
     8401 gcctgactga gttcggcaaa gattttgctt ttgtcgtctg tcggctggac gctgtaagaa
     8461 atagttttga cataatacgc gccttctttg cggtagtagg gttcaaaaaa gtcgggcgtt
     8521 ttcttatggc tgttgcctat agattggttg gcggcgacgg cataatcaac aacatcgtcg
     8581 ggcacgtcca gttttaacgc ggcttcacat ttgagtttgc tggacgtgtc ggttttctcg
     8641 gtagttcgga cttcatcgac ggttatgccc aaacgttcga ccattctgcg gatatgcgat
     8701 atgccgatat cggcaaatgc ttggtctttg aatgcgtcgt cgtcaaaagt tttgacggtt
     8761 tcaccttcga cattgtcgcg gaccagtttg accaaaatct ctttagtctc ttcgcttccg
     8821 caggaaattt cctttccgga aaacgggttg cctattccca aacggtcgca gcccgacaaa
     8881 atcagcatac ttgccaatgc cagtgcgggt aaattttttt tcattagatt tcctttgccg
     8941 tccaaacacg gactgtctgt tgcgtatttc cacacacgct acggcacttg aagtacatgg
     9001 ctgcggaaca tatatgttta aatttatgca aaccgccata tcgggattgc acacgccctg
     9061 caaatttacc gacggttttc ctgttcgata aaaatgccgt ctgaaacggt cggcgttcag
     9121 acggcatttt tccgcaggtt ttatttgcgg ttggtctgca ggtagaggtt aatcaggcgt
     9181 tcggtcgagc tgtcgtgttt ttgaggttcg gtttcgcctg tcagttcgcc caaaatggtt
     9241 ttagccagtt gtttgccgag ttccacgccc cactggtcga agctgttgat gccccaaatg
     9301 atgccttgga cgaaggtttt gtgttcgtac atggcaatca ggctgcccat attgcggggg
     9361 ttgaccttat ccatcaggat gaggttggtc gggcggttgc cggagaaggt tttgtgcgga
     9421 accagctctt cgatgcgcgc ctcatccata ccctgcgctt tgagttcggc gcggacttcg
     9481 tcgggggttt tgccgcacat aaaggcttct gcttgtgcaa agacgttggc aagcaggatt
     9541 tcgtggtgtc cgggcaggtt gctgcgtttt tcaagcgagg caatcaggtc gatgggggtg
     9601 atgtgcgtgc cttgatgcag cagttggaag aaggcgtgct gaccgttaat gcccgtttct
     9661 ccccagataa tcggcgaggt ttcgtgtccg actgctttgc cgtccaacgt aacctgtttg
     9721 ccgttgcttt ccatatcgag ctgctggatg aatttgggca ggcggtgcaa atgttggtcg
     9781 taaggcgcga tgacgtggct gccgccaccg tagtagttga tataccagat gccgatgagg
     9841 gcgaggatga cgggcaggtt gcgctcgagc ggggtgttga tgaagtgttg gtccatcagg
     9901 tgcgcgccgt tgagcatttc gatgaagttt tcttcgccga gatacagcat aatcggcaat
     9961 ccgatggcgg accacaggct gtaccgaccg ccgacccaat cccaaaattc aaacatattg
    10021 gcgatgtcga tgccgaattc ggcgacggct tttcgattgg tggaaacggc ggcgaagtgt
    10081 ttggcaacgg cttcttcgtc acccgcatga ttcaaaaacc attcgcgcgc ggttagcgcg
    10141 ttggtcagcg tttcctgcgt ggtaaatgtt ttggaggcga tgatgaacag cgtggtttcc
    10201 gggtggactt tggacaatac gtcgcgcagt tgcgagccgt ccacgttgga gacgaagtgc
    10261 atattgaggc gcggatgacc gaaaggtttg agcgcggtac acatcgtcag cgggcccaaa
    10321 tccgatccgc cgatgccgat gttgacaacg tcggtaatga cttggttggt atagcccagc
    10381 cagcttccgc tgcggacttc gtgtgcaaat tcgcccatac gttgcaaaac gcggttgact
    10441 ttgggcatca catcttcacc gtcaaccata atcggcgaat tggtgcggtt gcgaagggcg
    10501 acatgcagga cggcgcggtt ttcggtggta ttgatttttt cgccgtggaa catctgccgc
    10561 atccgctccg gcacgcctgc ttcacgcgcc aactcgaaca gtagggacat ggtttcgtcg
    10621 ttgatgcggt ttttggagta gtccagcgtc agtccgccga cttgcagcca gtagcgttcc
    10681 gcccgctgcg ggtcttgctc gaacatttcg cgcatatgca atgttttgct gtcgtcaaag
    10741 tggttccaca attttgacca ggccggtaag tcgtgaaggt gtttcatctg tatgctcccg
    10801 attgaggttt tccgtgacgg ggggcgtttc cgcacatcga tgcgcacata aggcgcaacc
    10861 ctgcgtaccg ccccgatttg gaaggggttg cggcaaaccc gaaccctgcc gccttaaagg
    10921 gcggggtttc cgccattaag gaaattctga taaaaggctt gccggagcct gtccggccgt
    10981 tcagacggca ttggcgggat gccgtctgaa catcagtctt tgtcgtaatc gatgtgcttg
    11041 ttgtgtatgc tttttttgct tttctgcaat tgcaggctgg cagcatcgcc caagcgcagg
    11101 gcaagtccga tggcgagaat atcgatgacg gcaagctgca agaggcggga aaccatgggc
    11161 gtgtagagtt cggcgttttc ctgtgtggca acgctcaaca cgcagtcggc aagttgcgcc
    11221 agaggcgaat cgttgcgggt cagtgcgatg acggacgcgc cgttttcttt ggcgatgctg
    11281 accgcatcca aaagttcgat agacgaaccc gtgttggaaa tggcaaccaa aacatcctga
    11341 tcgctcaaaa cggatgccgc catcagttgc gtgtgcgtat cgacataggc gacggtggac
    11401 atgccgaaac ggaaaaattt gtgctgcgcg tcctgtgcca caatgccgga attgcccacg
    11461 ccgtaaaatt cgacgcggcg ggcgtgcatc agggtggcga tgccgttttc gagttcggat
    11521 tcttttaaga acctcctctc ccccaacaag gctgcggcgg cgttgcccaa cactttttca
    11581 accacattcg ccatatcgtc gtcggcattg agttcttcgt ggacataagg cataccttcg
    11641 tgcccgatgc tggcggacag ggagagcttg aattccggca gccccttata accgaggctg
    11701 cggcagaacc ggatgacggt cggctggctg accgaggcgc ggtcggcgat ttcggcgacg
    11761 gcggcgtgga caaaccactt gggttctgcc aaggcgcatt cggcaacttt gcgttccgca
    11821 ccggacaggt cggccagtga ttcgctgatt ttgcttaaca taatgatatg cccttcgata
    11881 atgcggccct gctgcaaggg ctgccgtggt tagacgtttt tcaggtggtt gccgagcgcc
    11941 gccgccgcgc cggcaatacc cggaaattcg ctcaagacga cataaacggg aatcgcggca
    12001 aggtaggctt caaaacgccc tttgttttca aagcggctgc ggaaggggga ggttttgaag
    12061 taatccaaca ttcgcgggat aatgccgccg cacaaataca cgcccccgcg cgcgcccaaa
    12121 gtcagggcga ggttggaagc gaccgtgccc agcatcgcgc agaaaatgtc caatgcctgc
    12181 cggcacaggg gcgattcgca atttaatgcc ttttcggtga tttcagacgg catcagtttt
    12241 gccggttcgg ctttctgctt ggccgccagc gtttcataaa tcaggctcaa acctgcgccg
    12301 ctgaggaaac gttcggcgga aacgtggcgg tatttgtttt tggcgtactg ccaaatcaac
    12361 acttccatat cgtcaaacgg cgggaaactg gtatgcccgc cctcgcccgc caacgccacc
    12421 cagcctgcgg ggctgtgcac caatccgctc acgcccaagc cggtaccggg gccgataacg
    12481 gccttggggg cgaattcgac aggcttttgc ccgcctacct gcatcaggtc tttgcttgaa
    12541 gtctgcgtta ccgccaatgc ctgcgcggta aagtcgttca aaaggatgag ggtgtccagc
    12601 cccaaagcct gacgggtggt ttcgatggaa aacgcccaat ggtggttggt catctgcacc
    12661 cagtcgccca aaatcgggtt ggcgatggca aatgccgcgt gccgtacgcc cgttgcacca
    12721 ctttggttca gataggcacg caccgcgtcg gtaaccgtgt cgtattcctt acacggcagg
    12781 acggcgactt tctcaatcac gcacggcgcg gtttccaatg cgaaacgggc gtttgtgccg
    12841 ccgatgtcgg caaccagcct cgggtaatcg gcgtgtttat tcggcgtaga agacatggca
    12901 gttcactcct tgatggttca aaacgaggct gatcggatat tcgcggtttt cgccttgtgc
    12961 ggcttggtcg aacacggctt ttttctcttc gccctgtatc gccaaaaata catgcccagt
    13021 atgggcaatc gcatccaaag tcatgctgat gcgctcgtgc ggcgcggtaa cgggcgtggt
    13081 atgcaccagc gcgacacctg ccgaaccgtc gattgccgtc tgaaactgcg gagcttttgg
    13141 gaaaatcgaa gccgtatgcc cgtcgtttcc catacccaaa atcaaaacat cgggctgctt
    13201 gtaatgtttc agcgcataat cgacaacagc atcgggatgt aattcggttt cagtttttcc
    13261 gtcttccacc ataggaatcc acactgccgc agcggctttg ttctttaaca ggtattcgcg
    13321 caccagaccg gtattgctgt cggcgtggtt ggtcggcacg atgcgttcat ctgccaaggt
    13381 aattccgacg tttttccaat ccaaatcttt ttgcgacagg gcgttgaaaa atgcaatcgg
    13441 cgaacgtccg ccggaaactg ccaacaccgc accgcccttc tcgtccagtg cgccctgcaa
    13501 agcatccgcc actgcgtcag ccaaagactg cgccgcttct gccgcatttt cgtattcgtg
    13561 ccaaacaaac atatttgtgt ccttttgtga tttcagacgg catatcccgt tacagggcgg
    13621 ctgccgggca atggcttagc cgcttccgcc tcgaagcggg actgcttttt ctgcccgccc
    13681 tccttcagac ggcattgcga acccgatgcc gtctgaagcg cattactgtt cttcgtgcca
    13741 cttgttgccg tcgcgcgcca acagttcgcg ggcggcttca gggccccaag agtgtgcgcc
    13801 gtaaccgtgc ggcggcgtgg tgttatttgc ccagttttcc aaaatcggca tcacatattc
    13861 ccacgcggct tcgagttcgt cgcggcggtt gaacaaagcg agtttgccgt taatcacatc
    13921 caacagcagg cgttcgtaag cctcggcgcg gcggccttca acggccttgc ccaaatccac
    13981 gcccaaaggc gttacttcca ctttgttgcc cgcacccggg gttttcacct gcgtgtaaag
    14041 gcggacggat tcattcggtt gaagctcgat aaccaaacgg ttcggcgcgg tttggctgtt
    14101 gtcgaaaata tggttttgca gcgggcggaa gttcaaaacg atttccgcca ctttgcccgc
    14161 catgcgtttg ccggtacgca ggtagaaggg aacgcccttc cagcgttcgt tttcgatttc
    14221 ggctttaatg gcgacgtagg tttcggtaaa gctgtcttgc ggaacgttga tttcttcaag
    14281 atagccgttc atgcctttgg cagcggtata ttgtccgcgc acgacatttt cattgacaga
    14341 ttcgatggtc agcggcttca atgacttgat gactttgact ttttcatcgc gcaccgcgtc
    14401 ggcatccaag ctggcggggg cttccatcgc agtcatgcac agcatctgca tcaaatggtt
    14461 ttgcaccata tcgcgcaacg cgccggtaat gtcgtaaaac tcgccgcgct cttccacacc
    14521 gagctgttcg gcgatggtca gctgcacgct ttcgatgtat ttattgttcc acagcggctc
    14581 gaacattaca ttggcaaaac gcagcgcaag caggttttgc aggctttctt tgccaaggta
    14641 gtggtcgatg cggtaaattt gcccttcttt gaaataacgc gccacatcgg tattgatttg
    14701 ttgggaagaa gccaaatccg tacccagcgg tttttccaaa accacgcgca cattgtcggc
    14761 attcaaaccg atcgcagcaa ggttttcgca ggcttgcgcg aagaatttcg gcgcggtgga
    14821 cagatagatg acgacgttgt cggtttcttt gcgtgctttg accaaatcgc ccaaagcggc
    14881 aaaatcgtcc ggctgcgtaa catcgacttt gagatatgcg agacgttcaa caaacgaagc
    14941 ccacgcctca ccggaaaaat tttctttcac atggattttg gaactggttt ccaccttcgc
    15001 cagaaaacct tcggtatcca actcgctgcg gctgaccccc aaaatacgcc cttcgggatg
    15061 aagcagaccg gcaacatgcg cctgatacag gcagggcaaa agtttgcgca ttgccaaatc
    15121 gccggtcgca ccgaacaaca ccaaatcaaa atttgtctgt gtactcatcg cattatctcg
    15181 tcaggaaagg attttttcga tgccgtctga aacctgtttt ttccatcacg cagcatcgca
    15241 atatcggaaa caaaggcagg cggcataatg agtagtaata ctacacaccg ctacactttt
    15301 tgtctattcc catttttaca atttatttga cctagtccaa aaatcaggca ggtttcccct
    15361 attccgttac aacaatcaga agattctgcg atttaaatca aatttctttt caatgtctga
    15421 tttttttgta acaaaattac aaattttgta ctataatagc acccgcttcc cactttcaga
    15481 cggcgtacct tttaaaatat agtgaattaa atttaaatca ggacaaggcg gcgagccgca
    15541 gacagcacaa atagtacggc aaggcgaggc aacgccggac cggtttaaat ttaatccact
    15601 atactcaccg tctaacatac ccgatacaaa aatcagaaac gcacaaacaa atccccaata
    15661 ccaccccgtt ccgccaggag accgaacatg aaccacactc ctatccaccc caaactcgcc
    15721 gaaatcaccg ggcgcattat cgaacgcagc cgtccgacgc gtgaaaaata tctggcgaaa
    15781 atccgcagtg ccaaacaaat gggacgctta gagcgcaacc agctcggctg cagcaatttg
    15841 gcgcacggtt atgccgccat gcccaaaagc atcaaaatcg aaatgcttca ggaaaccgtc
    15901 cccaacttag gcatcatcac tgcctacaac gacatggttt ccgcacacca gccgtttaaa
    15961 gacttccctg accaaatcaa agacgaagca caaaaaaacg gcgcgaccgc acaagtcgcc
    16021 ggcggcacgc ctgccatgtg cgacggcatc acgcaaggct acgccggcat ggaattgtcg
    16081 ctgttttccc gcgacgtgat tgcgatgagt accgccgtcg ggctgtcgca ccaaatgttt
    16141 gacggcagcc tgtttatggg cgtgtgcgac aaaatcgttc cgggtctgat gataggtgcg
    16201 ctttcgttcg gtcatattcc cggtatcttc gttccggcag gcccgatgtc cagcggcatc
    16261 ggcaataaag aaaaagcccg tacccgccaa cttttcgccg aaggcaaagt cggacgcgac
    16321 gaacttttga aaagcgaaat gggttcttac cacagcccgg gcacctgcac tttctacggc
    16381 acggcaaact ccaaccaaat gatgatggaa atgatgggcg tacacctgcc tgccgccgcc
    16441 tttgtccacc cctataccga cctgcgcgaa gccctgaccc gctacgccgc cggacacctc
    16501 gcgcgcggca tcaaaaacgg cacgattaaa cctttgggcg aaatgttgac cgaaaaatcc
    16561 ttcatcaatg ccctgatcgg tttgatggcg accggcggct cgaccaacca caccatgcac
    16621 ctcgtcgcta tggcgcgcgc cgcaggcgtg attttgaact gggacgactt cgacgaaatt
    16681 tcttccatca tcccgctgct catccgcgtg tatcccaacg gcaaagccga cgtgaaccac
    16741 tttaccgcag caggcggcct gcctttcgtt atccgcgaat tgctggacgc aggcttattg
    16801 cacgacgatg tcgataccgt cgtcggacac ggtatgcgcc actacactaa agagcctttc
    16861 ctcatcgacg gcaaactcga atggcgcgaa gcccccgaga ccagcggcaa cgacgacatc
    16921 ctgcgtaaag ccgacaatcc gttctccccg gacggcggtc tgcgcctgat gaaaggcaac
    16981 atcggacgcg gcgtggttaa agtgtcagcc gtacgcgaag gctgccgcat catcgaagca
    17041 cccgccatcg tgttcaacga ccagcgcgaa gtgttggcgg catttgaacg cggcgagttg
    17101 gaacgcgatt ttatctgcgt cgtccgctac caaggcccgc gtgccaacgg tatgcccgaa
    17161 ttgcacaaac tgaccccgcc tttgggcatc ctgcaagacc gcggcttcaa agtggcgctg
    17221 ctgaccgacg gccgtatgtc cggcgcgtca ggcaaagtgc ccgcgtccat ccacatgacg
    17281 cccgaagccc tgatgggcgg caacatcgcc aaaatccgta ccggcgacct gattcgcttc
    17341 gactccgtta ccggcgaact caacgtcctg attaacgagg ccgaatggaa cgtccgagaa
    17401 gtcgagcgca tcgatttggg cgcgaaccaa caaggctgcg gccgcgaact cttcgccggc
    17461 ttccgcagta tgaccagcag tgcggaaacc ggtgcgatga gcttcggcgg agaatttgcc
    17521 tgatgcgcgt ttcagacggc cttttaaaac agaaggccgt ctgaaaaatt attgaagccg
    17581 tttaaaatag atgcagacgt agcgtgagct ttgcccgcga acaaaaccca agcaacatca
    17641 gaatgtttta ccccaaaggt tgtctgaaaa cttaaccccc ccatcccgtt tgacctcaac
    17701 aaaaacgaca ccccccactt ggagaaccga aatgtccaaa ctgacccccc gcgaaatcct
    17761 gaccgccggc gcagttgtgc ctgtgatggc gattgacgac ttaagcaccg ccgtcgattt
    17821 gtcccgcgcc cttgtcgaag gcggcatccc caccctcgaa attaccttgc gcacccccgt
    17881 cggactcgag gccatccgcc tgattgccaa agaaatgccc aacgccatca tcggcgcagg
    17941 tacggtaacc aatcccgaac agctcaaagc cgtcgaagac gcaggcgcgg ttttcgccat
    18001 cagcccgggt ttgcacgaat ccctcgccag agccggccgc aacagcggca ttcccctgat
    18061 tcccggcgtt gccactccgg gcgaagtcca actggctttg gaacacggca tcgacacact
    18121 caaactcttc cctgccgaag tcgttggcgg caaagcgatg ctcaaagccc tctacggacc
    18181 ttacgccgac gtacgcttct gcccgaccgg cggcatcagc ctcgccactg cgcccgatta
    18241 cttggcattg cccaacgtct tatgcgtcgg cggctcttgg ctgacaccga aagaagccgt
    18301 gaaaaacaaa gactgggaca ccattacccg cctcgccaaa gaagcggcgg cattgaaacc
    18361 caaagcctga accgcatcgt aaaaatgccg tctgaagccc tttccagtct cagacggcat
    18421 tttgccgctt ggcgactcag tcggcataca cagcagcacc gcccctaaaa tgcccatcca
    18481 tctccagaac aatgcgaatg acgcgcgata tgcggagacc tatgacgaaa aaataattat
    18541 aatatattta tcaattagtc ataaaaatcg ccctatcggt aaaatgccgt gatgagcggc
    18601 tgaaactaac aagttaaccg tcgttaaaaa ataacgctca gagacctttg caaaattcct
    18661 tttcttcaaa cagccgacat ccaaccacag gtttttcggc tgttttcgtt tcaaataacc
    18721 gccgttccca ccaaaatatc ccattaatcc cccttaaata tagtggatta aatttaaacc
    18781 agtacggcgt tacctcgcct tgccgtacta ttttactgtc tgcggcttcg ttgccttgtc
    18841 ctgatttaaa tttaatccac tatacctgat tgatcaggaa cagcccgttt tacacggctg
    18901 aaaaaatgcc gtctgaaaca cgttcagacg gcatccgctt aaaaaacaac tgattcaacg
    18961 gcgattaatc cgcttccaaa accactttca tcgcttggtt ttcggcggcg tgtttgaaca
    19021 cgtcgtaggc tttttccaat tggctgaatt tgaaacggtg ggtcaacatt ttggtgtaat
    19081 ccactgagct gctgaaaatt gccttcatca gtatttcggt ggtgttggca ttgaccaaac
    19141 cggtagtgat ggcaagattt ttaatccaca gtttttccag tttgaaatca acggattgac
    19201 cgtgtacgcc gacgacggcg atatgaccgc cgggtttcac gatgtcttgg cacatattcc
    19261 aagttgcagg gataccgacc gcttcgatgg cacaatctac gccgtcttcg ccgacgatgg
    19321 cgaaaacttg tttggagacg tcgccggaag cggggctgat ggtatgggtc gcgcccaact
    19381 ctttcgccgg tttcaaacgg ttttcgtcca tatcgcacac gataatggcg gcagggctat
    19441 acagttgggc ggtcaacaag gcggacatac cgacagggcc ggcacctgcg atgaatacgg
    19501 tatcgccggg tttcacatcg ccgtattgca cgccgatttc gtgggcggtc ggtaaagcgt
    19561 cgctcaacag cagggcgatt tcttcgttga cgttgtcgtg cggcggcacg aggctgttgt
    19621 cggcataagg cgtgcggacg tattcggcct gcgtgccgtc aatcatatag cccaaaatcc
    19681 agccgccgtt gcggcagtgc gaataaagtt ggattttgca gttgtcgcaa gtgcagcatt
    19741 tgctgacgca tgaaataatg actttatcgc cgactttgat gttttttaca gcctcgccga
    19801 cttcttctac aataccgatg ccttcatgac cgaggatacg accgtcggcg acttcggggt
    19861 ttttgccttt ccaaataccc aagtcggtac cgcaaatcgt ggttttgacg attttcacca
    19921 ccgcatcggt cggatcgata atctgcgggc ggggtttttc ttcaaaacgg atgtcgtttg
    19981 cgccgtgata aaccattgct ttcatgctga tactccttgc ttgttgataa ataatttcaa
    20041 taccgcaaca aagtttcttt atatgagtta tatgccccta caaaaaataa gtcaataaga
    20101 attattttca caattttata caacaacata ctgttttaaa tataaataaa accaccgatt
    20161 gatattaatg aacacaccca tccccttctc cgaacggctc atccgctggc aaaaacaaca
    20221 cggtcgccac cacctccctt ggcaggtcaa aaacccttat tgcgtctggc tttccgaaat
    20281 catgctccag caaacgcagg tcgccgccgt gttggactac tatccgcgtt tcttggaaaa
    20341 attcccgacc gttcagacgc ttgccgccgc gccgcaagac gaagtgttgt cgttgtgggc
    20401 gggcttgggc tattacggcc gcgcgcgcaa tctgcacaaa gccgcgcaac aaatcgtcgg
    20461 acaattcggc ggtacgtttc catcggagcg caaagacttg gaaacgctct gcggcgtagg
    20521 cagaagcacc gccgccgcca tttctgcctt tgctttcaac cgacgagaaa ccatcttgga
    20581 cggcaacgtc aaacgcgttc tctgccgtgt ttttgcccaa gacggcaatc cgcaagataa
    20641 aaaatttgaa aactcgctct ggacacttgc cgaaagcctg atgccgtctg aaaacgccga
    20701 tatgcctact tacacgcaag gtttgatgga tttgggcgcg accgtgtgca aacggacgaa
    20761 acccttgtgc cgtcaatgcc ctatggcgga catctgcgaa gcaaaaaagc aaaaccgcac
    20821 cgccgagctg ccgcgtaaaa aaactgccct cgaagtgcaa accctgccgc tttactggct
    20881 gattgtccgc aaccgggacg gcgcaatctt gctggaaaaa cgcaccgcca aaggcatttg
    20941 gggcggactg tattgcgtgc cgtgttttga aagtttgaac gggctttccg actttgccgc
    21001 caaactctcc ctgacgatgg cggatatgga cgaacaaacc gccctgaccc accgcctaac
    21061 gcaccggctg ctgatgatta cgccgtttga agggcaaatg ccgtccgaac accattcaga
    21121 cggcatttgg ataaagccgg gccatttgaa agattacggc ctgcccaagc ctttggaaat
    21181 ttatttaaac ggtaataggt tagaataaac aaaataaacc cgttgaactg ttgttagcag
    21241 gtatcgcagc aagaacaacc gatgaatttg ggtcgtattt taggcagcgg gataatgttc
    21301 aaatgggaca tttggaacgg aaaaagtcgg caatttaaaa aggattttag aaacaaagag
    21361 ggtcaaaaac atgaacacaa acttaaatga caaagacaaa gccatggata ccgcaatcag
    21421 gtttcagaaa aggatgagga ttccgaaatt tttcttttta attctcggaa tcacagtggt
    21481 tttggcattt atccaagacg tgataacggg ttcta
//
LOCUS       DAXFZM010000028        21063 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.028, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000028 DAXFZM010000000
VERSION     DAXFZM010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21063)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21063)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21063
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.028"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..258
                     /locus_tag="ACFJAG_000899"
     CDS             <1..258
                     /locus_tag="ACFJAG_000899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980231.1"
                     /translation="QTRYPLVFNYAISGMGHRLSLEKISISQCPQCGGEMKYYNKPIE
                     WENIRYSDGSKKRRVTRTTPALECKRNREHWYKVDPAEDKI"
     gene            318..665
                     /locus_tag="ACFJAG_000900"
                     /pseudo
     CDS             318..665
                     /locus_tag="ACFJAG_000900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003762781.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0043571 - maintenance of CRISPR repeat
                     elements [Evidence IEA];
                     GO_process: GO:0051607 - defense response to virus
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated endonuclease Cas1"
     gene            635..955
                     /locus_tag="ACFJAG_000901"
                     /pseudo
     CDS             635..955
                     /locus_tag="ACFJAG_000901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713917.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Dna2/Cas4 domain-containing protein"
     gene            1133..1318
                     /locus_tag="ACFJAG_000902"
                     /pseudo
     CDS             1133..1318
                     /locus_tag="ACFJAG_000902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696979.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Dna2/Cas4 domain-containing protein"
     gene            complement(1358..3286)
                     /gene="rpoD"
                     /locus_tag="ACFJAG_000903"
     CDS             complement(1358..3286)
                     /gene="rpoD"
                     /locus_tag="ACFJAG_000903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HFC3980232.1"
                     /translation="MSKNQNHEEYQDDARPLTIEEQRARLRQLIIMGKERGYITYSEI
                     NDALPDDMSDADQIDNIVSMISGLGIQVTEHAPDAEDILLSDNAAVTDDDAVEEAEAA
                     LSSADSEFGRTTDPVRMYMREMGQVDLLTREDEIIIAKKIENALKNMVQAISACPGSI
                     AEILELIEKICKDEIRVDEVVEAIIDPNEVLLNELGLGHLETTAPEKPSNDNSDENED
                     DEESEEDADEVSAANLAELKQKVIGHFAQIEKDYKKMIGCLEKHHSRHKDYLAYRDAI
                     ANKLLEVRFATRQIDSLSSSLRGKVENIRKLEREIRDICLDRVHMERDYFIQNFLPEI
                     TNLQWIEEEIAKGRVWSNALDRFRHAILEKQTELADMEKETRISIEELKEINKNMVSS
                     EKETAAAKQEMIQANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYK
                     FSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQHLQETGEEPDSAKLA
                     ELMQMPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDANNVAPADAAMYTSLHE
                     VTKEILESLTPREAKVLRMRFGIDMNTDHTLEEVGRQFDVTRERIRQIEAKALRKLRH
                     PTRSDRLRSFLDSEDSKL"
     gene            complement(3473..5245)
                     /gene="dnaG"
                     /locus_tag="ACFJAG_000904"
     CDS             complement(3473..5245)
                     /gene="dnaG"
                     /locus_tag="ACFJAG_000904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003896 - DNA primase activity [Evidence
                     IEA];
                     GO_process: GO:0006269 - DNA replication, synthesis of
                     primer [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HFC3980233.1"
                     /translation="MIPSDFIDELLAKTDIVGIIDEQVPLKKGGANYMACCPFHKEKT
                     PSFSVSPTKQFYHCFSCGAHGSAIGFVMEHQGLSFPEAVQFLADRVGMIVPKVRGQND
                     NPEVRAERKKKQQTLEETTAAAADFYAQQLKFNPAAKAYLDKRGLSAEVIAHYGLGYA
                     PDGWQPLAQVFQPYPNTALVDTGMVIDNEGRHYDRFRHRIMFPIRNPRGQVIGFGGRV
                     LDDSKPKYLNSPDTPLFDKGKNLYGLYEGRAAVKEAERILVVEGYMDVVALAQFGVGY
                     GVAALGTATTAEHVKILMRQADSIYFCFDGDSAGRKAAWRALENALPQLKDDKSLHFL
                     FLPEEHDPDSYIRAYGKAQFEDALLNQSKPLSEYFWEHLSDGIHLNTQEGKAELVKTS
                     SPLLVQITAPALAYLLKQRLSELVGIDPDNLAQLLGQEAPKRHVKQKNYKLPPISVKQ
                     PVMPTLVQRQIRSLLINPDWAAYIDLPDYLALDGDFACLANLAETIKNHPSVPATAQV
                     LEHMRGSPYEETIDRIFRSALQSEEMEGGGEEDCENFQIGIKKLLNELKYSQIETLKQ
                     KSLQSGLNESEKKLLLSLLTAKQN"
     gene            complement(5390..8140)
                     /gene="secA"
                     /locus_tag="ACFJAG_000905"
     CDS             complement(5390..8140)
                     /gene="secA"
                     /locus_tag="ACFJAG_000905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006605 - protein targeting [Evidence IEA];
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA];
                     GO_process: GO:0017038 - protein import [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HFC3980234.1"
                     /translation="MLTNIAKKIFGSRNDRLLKQYRKSVARINALEEQMQALSDADLQ
                     AKTAEFKQRLADGQTLDGILPEAFAVCREASRRVLGMRHFDVQLIGGMVLHDGKIAEM
                     RTGEGKTLVATLAVYLNALAGKGVHVVTVNDYLASRDAGIMEPLYNFLGLTVGVIISD
                     MQPFDRQNAYAADITYGTNNEFGFDYLRDNMVTDQYDKVQRELNFAVVDEVDSILIDE
                     ARTPLIISGQADDNIQLYQIMNTVPPHLVRQETEEGEGDYWVDEKAHQVILSETGHEH
                     AEQILTQMGLLAENDSLYSAANISLMHHLMAALRAHSLFHKDQHYVIQDGEIVIVDEF
                     TGRLMSGRRWSEGLHQAVEAKEGVEIKRENQTLASITFQNYFRLYTKLSGMTGTADTE
                     AFEFQSIYNLETVIIPTNRPVQRKDFNDQIFRSAEEKFEAVVKDIEECHKRGQPVLVG
                     TTSIENSELVSRLLQKAGLPHNVLNAKEHEREALIVAQAGKVGAITVATNMAGRGTDI
                     VLGGNLKHQTDAIRADETLSDEEKQAQIAALENGWQAEHDKVMEAGGLHIIGTERHES
                     RRIDNQLRGRSGRQGDPGSSRFYLSFEDPLLRLFALDRAAAILNRLAPERGVAIEHNL
                     LTRQIEGAQRKVEGRNFDMRKQVLEYDDVANEQRKVIYSQRNEILTSKDIGDLMQEIR
                     SDAVSDLVDTYMPPDSMEEQWDIPTLENRLAAEFRLQEDIQSWLKADNAIDGQDIKER
                     LIERIENEYAAKTELVGKQAMADFERNVMLQAIDNQWREHLAAMDYLRQGIHLRSYAQ
                     KNPKQEYKREAFTMFQDLWNGIKFHIASLLTSVQIEQNPVAAVEEQPVGNIQSIHSES
                     PDIEELLGQSQTDLVTEAFNPDGTDFSPEALEARGQIVHRNDPCPCGSGLKYKQCHGK
                     LA"
     gene            8272..8694
                     /locus_tag="ACFJAG_000906"
     CDS             8272..8694
                     /locus_tag="ACFJAG_000906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DciA family protein"
                     /protein_id="HFC3980235.1"
                     /translation="MNLEQLGRRDALLSGLLKQAGQWRRLDAAVKKLLPANLHPHFQT
                     ACIEDGRLVLLAANNMAASRLKMIAPSVLPQLAGLDASIRSVSVRLVPKPEKPPKTNT
                     LHLSKAALESFDSAAAKLEERHPELAEALEELVRKYGA"
     gene            8977..9528
                     /gene="azu"
                     /locus_tag="ACFJAG_000907"
     CDS             8977..9528
                     /gene="azu"
                     /locus_tag="ACFJAG_000907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="azurin"
                     /protein_id="HFC3980236.1"
                     /translation="MKAYLALISAAVIGLAACSQEPAAPAAEATPAGEAPASEAPAAE
                     AAPADAAEAPAAGNCAATVESNDNMQFNTKDIQVSKACKEFTITLKHTGTQPKASMGH
                     NLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESSLTLDPAKLADG
                     DYKFACTFPGHGALMNGKVTLVD"
     gene            9623..10132
                     /locus_tag="ACFJAG_000908"
     CDS             9623..10132
                     /locus_tag="ACFJAG_000908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HFC3980237.1"
                     /translation="MNPFETQSVTFAEPIEMLYACHGKVRRFCGQIAMLSGYIAENGC
                     NQLVLQTIRQISRYFNVAAPLHHEDEEENFFPLLLQYAPQAREGVDELLRQHIGLYDN
                     WAAVSAEFAKLEADNAYIPDAEAFKRFVEGYDVHLAIEEPLFDMGKTFIPEEKLTEIG
                     EIMAARRCK"
     gene            10166..10786
                     /locus_tag="ACFJAG_000909"
     CDS             10166..10786
                     /locus_tag="ACFJAG_000909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate 1-dehydrogenase"
                     /protein_id="HFC3980238.1"
                     /translation="MLTPKSCDLFNIPFFQFAQLKKYQPESIPQIKADYKENWQIWQQ
                     LIQQVAADLSEPFAPPHIERWCNGWQVRAHFFAYFKYAQYKNSAAILSILLNRRRLSV
                     SLDWHCYKADVSPIALPEYNRWLDDFDTEKYAAFDMWHGAESEYDDYRTVAQQSESDR
                     RLQNDEDFFCIGKHIERDDLGKQDVAKWIAETVEDLLPLYEACHGK"
     gene            10899..12044
                     /gene="dapE"
                     /locus_tag="ACFJAG_000910"
     CDS             10899..12044
                     /gene="dapE"
                     /locus_tag="ACFJAG_000910"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009014 - succinyl-diaminopimelate
                     desuccinylase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HFC3980239.1"
                     /translation="MTETQSLELAKALISRPSVTPDDRDCQKLLAERLHKIGFAAEEL
                     HFGDTKNIWLRRGTKAPVVCFAGHTDVVPTGPVEKWDSPPFEPTERDGRLYGRGAADM
                     KTSIACFVTACERFVAEHPDHQGSIALLITSDEEGDALDGTTKVVDVLKARGELIDYC
                     IVGEPTAVDKLGDMIKNGRRGSLSGNLTVKGKQGHIAYPHLAVNPVHTFAPALLELTQ
                     EIWDEGNEYFPPTSFQISNINGGTGATNVIPGELNVKFNFRFSTESTETGLKQRVHAI
                     LDKHGVQYDLQWSCSGQPFLTHAGKLTDVARTAIAETCGVEAELSTTGGTSDGRFIKA
                     IAKELIELGPSNATIHQINENVRLDDIPKLSAVYERILARLLAEKAV"
     gene            12464..13279
                     /locus_tag="ACFJAG_000911"
     CDS             12464..13279
                     /locus_tag="ACFJAG_000911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HFC3980240.1"
                     /translation="MGALGGIVQHHTALYRSVAVYEPTVVIVRRGCKKLRWAGRELRI
                     AAGEAVGLAGGQTFDVINIPDSDGLYQAQWIAFEQETVERFAAQYGTAQAVCDAVKLP
                     HPGRMGAAFDYAAAVLADEEVPHNAAEAALCGVLAWLQHDGIGFAVYGGVNLMRQIRK
                     LITADMAADWSSAMLAQRLNCSEAALRRRLARQDTNFRTLLTDVRMMRALTLLQVTQW
                     SVAQIAGAVGYDCPSRFSARFKELFGCVPSVVRSEAEPAAYRRTGQVSVGVRP"
     gene            complement(13257..13814)
                     /locus_tag="ACFJAG_000912"
                     /pseudo
     CDS             complement(13257..13814)
                     /locus_tag="ACFJAG_000912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273197.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YbhB/YbcL family Raf kinase inhibitor-like
                     protein"
     gene            14164..14916
                     /locus_tag="ACFJAG_000913"
     CDS             14164..14916
                     /locus_tag="ACFJAG_000913"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HFC3980241.1"
                     /translation="MITLPSLNNLPSKWDEIRHCLETRVFECGVMPYPNLTECEAGQF
                     ERDFWDNIGCAPEEYVRIRRAIRLLELRYPDSLNELVCAAIATPLGEMLAVFGVKGLC
                     LLEFVGQKYLEQEIAAVQKALRGRFVFREDGRMQFLRQELDLYFKGHLKTFATPLEQI
                     GTEFQKQAWDALLAIPYGETRSYKEQAQRLGNPKAVRAVAAANGQNKVSVMIPCHRVI
                     GSDGKLTGYAGGLNRKQFLLALERGEVQTALF"
     gene            15107..15182
                     /locus_tag="ACFJAG_000914"
     tRNA            15107..15182
                     /locus_tag="ACFJAG_000914"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:15140..15142,aa:Asn,seq:gtt)
     gene            15313..16323
                     /gene="waaF"
                     /locus_tag="ACFJAG_000915"
     CDS             15313..16323
                     /gene="waaF"
                     /locus_tag="ACFJAG_000915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008920 - lipopolysaccharide
                     heptosyltransferase activity [Evidence IEA];
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase II"
                     /protein_id="HFC3980242.1"
                     /translation="MSIKILIISPSWIGDCVMTQPLFRRLKKLHPGCTIDVFAPKWSM
                     AVFERMPEVNEILENPFGHGALELKRRWRVGRELGRRGYDRVIVLPGSLKSAVIALAT
                     GIGKRTGYVGESRYFLLNDIRRLDKERLPLMVDRYTALAHQSQEDFDGHSGFPEFSID
                     ERRREISIETFGLNLGKPVLAFCPGAEFGPAKRWPARHFAELGKRYSEAGWQVWLFGS
                     QKDDEIAEEINCLSDGMCVNLCGKTDLSQAMDLLSLADTVVCNDSGLMHLAAALGRKV
                     VAVYGSSSPTHTPPLSDRAKIVSLHLECSPCFKRECPLGHTDCLNRLYPEKIVQAVEE
                     AV"
     gene            16378..16824
                     /gene="smpB"
                     /locus_tag="ACFJAG_000916"
     CDS             16378..16824
                     /gene="smpB"
                     /locus_tag="ACFJAG_000916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HFC3980243.1"
                     /translation="MAIANNKKAFHDFFIEDRIEAGLVLEGWEVKAIRAARVQLKESY
                     IYWKKDAFYLVGCHITALPTASTHIKPDAVRPRKLLLKQSEINKLIGKTERAGYTIVP
                     LDLHFSRGKIKMEIGLAKGKKQHDKRQSMKEADWKREKQRLIKHTR"
     gene            17196..17351
                     /locus_tag="ACFJAG_000917"
     CDS             17196..17351
                     /locus_tag="ACFJAG_000917"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980244.1"
                     /translation="MKLEASKQKFKKSFIISLFFSILYTSPLLAVDYVYDNSKLTNEQ
                     IDRLKKT"
     gene            17763..19229
                     /locus_tag="ACFJAG_000918"
     CDS             17763..19229
                     /locus_tag="ACFJAG_000918"
                     /inference="COORDINATES: protein motif:HMM:TIGR01414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HFC3980245.1"
                     /translation="MASLRPTLNQLSSWQEHLYSDVDPFHYIEVTDNSHVIGQTISLD
                     EFHLENSLWEPRWDSDVGELKTTNADIRFNTKSESLLVKEDYAGGARFRFAYDLKDKV
                     PETPVLTFEKNITGTSDIIFENPIDDLKSLDGHQIIKVNGTADKHAFRLSGKHQKGIY
                     KLSLQQRQDGFFTKVQERDDIAIYAQQAQAANTLFNLRLNDKNSNIFDRTLPRKGLWL
                     RVIDGHSNQWVQGKTAPVEGYRKGVQLGGEVFTWQNESNQLSIGLMGGQAEQRSTFRN
                     PDTDNLTTGNVKGFGAGVYATWHQLQDKQTGAYVDSWMQYQRFRHRINTEYATERFTS
                     KGITASIEAGHNALLAEHFTKKGNSLRVYLQPQAQLTYLGVNGKFSDSENAQVNLLGS
                     RQLQSRVGVQAKAQFAFTNGVTFQPFVAVNSIYQQKPFGVEIDGDRRVINNKTVIETQ
                     LGVAAKIKSHLTLQASFNRQTSKHHHAKQGALNLQWTF"
     gene            complement(19212..19517)
                     /locus_tag="ACFJAG_000919"
     CDS             complement(19212..19517)
                     /locus_tag="ACFJAG_000919"
                     /inference="COORDINATES: protein motif:HMM:NF014299.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980246.1"
                     /translation="MDPIVGLARARGRGELDRIEQMDLDFFHRTRARYLELVKDNPKA
                     VVINAEQTIELVQAEIESAVKIGGNYTKNDRTFKIIKSAVNFPADFILLQFNLKRPL"
     gene            complement(19558..20925)
                     /locus_tag="ACFJAG_000920"
     CDS             complement(19558..20925)
                     /locus_tag="ACFJAG_000920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HFC3980247.1"
                     /translation="MPDLHTEFSRLLPADEIAEPSPTLLKDQRNRFTSAPDIILQPRS
                     VESVQTIMRFCYEHRIPVTPQGGNTGLCGAAVSENGVLLNLSKLNRIRSINLSDNCIT
                     VEAGSVLQTVQQAAEASNRLFPLSLASEGSCQIGGNIACNAGGLNVLRYGTMRDLVIG
                     LEVVLPNGELVSHLHPLHKNTTGYDLRHLFIGSEGTLGIITAATLKLFARPSDKATAW
                     VGIPDIESAVRLLTETQAHFAERLCSFELIGRFAAELSSEFSKLPLPTHSEWHILLEL
                     TDSLPDSNLDDRLVEFLYKKGFTDSVLAQSEQERIHMWALRENISASQRKLGTSIKHD
                     IAVPIGRVADFVRQCAKDLEQNFKGIQIVCFGHLGDGSLHYNTFPPEILSNEVYRYEN
                     DINSTVYRNVLARNGTIAAEHGIGIIKKQWLPAVRTPSEIALMKSIKQHLDPYNIMNP
                     GKLLP"
BASE COUNT         4876 a         4991 c         5800 g         5396 t
ORIGIN      
        1 caaactagat acccattagt ttttaattat gctattagcg gtatggggca tcgtttaagt
       61 ctagagaaaa ttagtatttc tcaatgtcca cagtgcggtg gagaaatgaa atattataat
      121 aagccaatcg agtgggagaa tatacgttat tctgatggta gcaagaaaag aagggtaaca
      181 agaactacac cagcattaga gtgtaaaaga aatcgtgagc attggtataa agttgatccg
      241 gcagaagata aaatctaatt tttagctagc ccctcgttta accccaaaag cacggtcaaa
      301 acctaaggag ttttcccatg cgcaaactgc aaaacacact ctacatcacc acccaaggca
      361 gctatctgca taaggagcgg gagacactgg tggtggagca ggagcgtaag aaggtggcgc
      421 agttaccggt gcattccatc gggcatattt tctgttttgg gaatgtgctt gtgtcgccgt
      481 ttctgttggg gttttgcggc gaaaataatg tgaatttggc gttttttacc gaaaacgggt
      541 gttatttggg acggcttcag gggcggcaga acggcaatgt gctgttgcgt cgggcgcagt
      601 atcgggtgtc ggagcaaagt cccatgccga ttgcgtgcaa tatcattgcg gcaaagattc
      661 gggcgatccg gaaacgtgca agggcgtgcg ctttgagtgg acagtgcatg ttttggcgga
      721 taagctgggc atcagcggca tattggattt ggtggaagtg gatacaaaaa caggccgtct
      781 gaaacctgtg gaatacaaac gaggcaagcc caaacctgac ccgggggatg aaatccagct
      841 ttgcgcccaa ggcttgtgct tggaagaaat gacggggcaa accgtctctg agggcgcgct
      901 gtggtatatg caaacccgcc accgtgtccc cgtcgtgttt tcagacggcc tgagaccttt
      961 gcaataacat aggttactaa aattttatgc tcaatctcat tttcaaaatg caaaactttt
     1021 ctgatttttc ctactttttg ctcaatatta ggaaggtttt aggcaattga aaattttttg
     1081 gcgcattttt atgcgtcaaa tttcgttaac agactatttt tgcaaaggtc tcggcctacg
     1141 cgcccaaacc ctcgcaacta tagccgccgt ccgcgaactc ttaaacagcg gacaaacccc
     1201 gccgcccgac tacggcaaac gctgcaaagc ctgctctctg gtggaaatct gtcagccgga
     1261 gttgttggcg aaacgggatg ggagtgtggg atatgtggaa gcgttgttta ttgtgtaaga
     1321 aaaaaccgca ggtatttgaa acctgcggtt ttttggttta cagcttgctg tcttcgctgt
     1381 ccaagaaact tctcaaacgg tcgcttcttg tcggatgccg cagcttgcgg agtgcttttg
     1441 cctcgatttg acggatgcgt tcgcgcgtta cgtcaaactg tctgccgact tcttccagcg
     1501 tgtggtcggt gttcatatcg atgccgaaac gcatacgcag gacttttgcc tcacgcggtg
     1561 tcaggctttc gaggatttct ttggttactt cgtgcaggct ggtgtacatt gccgcatcgg
     1621 ccggcgcaac attgttggca tcttcgatga agtcgcccaa gtgcgaatcg tcgtcgtcgc
     1681 cgatgggggt ttccatcgaa atcggctctt tggcgatttt catgattttg cggattttgt
     1741 cttcgggcat ctgcatcagt tcggcaagtt tggcggaatc gggttcttcg ccggtttctt
     1801 gaaggtgttg gcgcgagatg cggttcatct tgttgatggt ttcaatcata tgtaccggaa
     1861 tacggatggt acgcgcctga tcggcaatcg agcgggtaat tgcctggcgg atccaccagg
     1921 ttgcgtaggt ggagaatttg tagccccggc ggtattcgaa cttgtcgacc gccttcatca
     1981 ggccgatgtt gccttcctga atcaaatcaa ggaactgcaa gccacggttg gtgtattttt
     2041 tggcaatgga aatgacgagg cgcaagtttg cctgaatcat ttcctgtttg gcggctgcgg
     2101 tttctttttc gctcgacacc atatttttgt tgatttcttt caactcttcg atggaaatgc
     2161 gggtttcttt ttccatatcc gccaactcgg tttgtttttc gaggatggcg tggcggaagc
     2221 ggtcgagtgc gttgctccaa accctgcctt tggcgatttc ttcttcaatc cattgcagat
     2281 tggtgatttc gggcaggaag ttttggatga agtagtcgcg ttccatatgg acgcggtcga
     2341 ggcagatgtc gcggatttcg cgttcgagtt tgcggatgtt ttctactttt ccgcgcaggc
     2401 tgctgctgag gctgtcgatt tgccgggtgg cgaaacggac ttccagcagt ttgttggcaa
     2461 tcgcgtcgcg gtaggcgaga tagtctttgt gccggctgtg gtgtttttcc aaacagccga
     2521 tcattttttt gtagtctttt tcgatttggg caaagtggcc gatgactttt tgtttcaatt
     2581 cggcgagatt ggctgccgag acttcatccg catcttcttc cgattcttcg tcgtcttcgt
     2641 tttcgtccga attgtcgttg gaaggtttct cgggtgctgt ggtttccaag tgccccaagc
     2701 ccaattcgtt gagcaatact tcattcgggt cgataatggc ttctacgact tcgtcgacgc
     2761 ggatttcgtc tttgcagatt ttttcgatga gttctaagat ttccgcaatg gaacccgggc
     2821 aggcggagat ggcctgaacc atatttttca gggcgttttc gatttttttg gcgatgatga
     2881 tttcgtcttc gcgggtcagc aggtcgacct gtcccatttc gcgcatatac atacggacgg
     2941 ggtcggtcgt cctgccgaac tcggaatctg cgctggaaag ggcggcctcg gcttcttcga
     3001 cggcatcatc gtcggtaacg gcggcattgt cgcttaacaa tatgtcttcc gcatcagggg
     3061 cgtgttcggt aacttggata cccaaaccgg aaatcatact gacgatgttg tcgatttgat
     3121 cggcatcgga catatcgtcg ggcagtgcgt cgttgatttc ggagtaggtg atgtagccgc
     3181 gttctttgcc cataatgatg agttggcgca ggcgcgcacg ttgttcctca atcgtcaggg
     3241 ggcgggcatc gtcttggtat tcttcgtgat tttggttttt ggacattgtc tgctttctgt
     3301 tggcaagatg ccgacggttt gcgtttggac gcacctgaag gcgtggcaaa gtagggtact
     3361 ctgatgccgt ctgaaggctt tttgggatgg gtgttctgca ggtgtcgttg ttgcagccgg
     3421 ggtgaatgct tttcagacgg cataacggtt tacagatggc ggaatccgcc ggtcaatttt
     3481 gttttgcggt cagcagcgac agcaaaagtt ttttctcgct ttcatttaag ccggattgca
     3541 ggcttttttg ttttaatgtt tcaatttggc tgtattttaa ctcattgagc agttttttga
     3601 tgccgatttg gaagttttcg caatcttctt cgccgccgcc ttccatttct tccgattgaa
     3661 gggccgaccg gaagatgcgg tcgattgttt cttcgtaggg cgaaccgcgc atatgttcca
     3721 aaacctgtgc ggttgccggc acggaaggat ggtttttaat ggtttcggcg aggttggcaa
     3781 ggcaggcgaa atcgccgtcc aacgccagat aatcgggcag gtctatatat gcagcccaat
     3841 ccggatttat caagaggctg cggatttgcc gttgcaccaa tgtcggcata acgggctgtt
     3901 tgacggaaat cggaggcagt ttgtagtttt tttgtttgac gtgccgcttt ggcgcttcct
     3961 gtccgagcag ttgcgcgagg ttgtcggggt cgatgccgac cagctcgcta agccgttgtt
     4021 ttaacaaata agccaatgcc ggtgcggtaa tctgcaccaa aagcggcgaa ctggttttca
     4081 ccaattccgc cttgccttcc tgcgtattga gatgaatgcc gtctgaaagg tgttcccaga
     4141 aatattccga caaaggcttg ctttgattca gaagcgcgtc ttcaaattgc gctttgccgt
     4201 aggcgcggat gtagctgtcg gggtcgtgtt cttccggcag gaataaaaaa tgcagcgatt
     4261 tgtcgtcttt caactgcggc agcgcgtttt ccagcgcgcg ccaagccgct tttcgccccg
     4321 cgctgtcgcc gtcgaaacag aaataaatac tgtccgcctg ccgcatcagg attttgacgt
     4381 gttccgccgt cgtcgccgtg cccaaggccg ccacaccgta gcccacgccg aactgtgcca
     4441 gcgcgaccac gtccatatag ccttcgacca ccaaaatccg ttctgcctct tttacagcag
     4501 cacgcccctc atacaagccg taaaggtttt tccccttatc gaacaaaggc gtatcgggcg
     4561 aattcaaata tttcggtttc gagtcgtcca gcaccctgcc gccgaaaccg atgacctgcc
     4621 cgcgcggatt gcggatgggg aacataatcc gatggcggaa gcggtcgtaa tgccgcccct
     4681 cattgtcaat caccatcccc gtatccacca acgcggtatt cggatacggt tggaacactt
     4741 gcgccaaagg ctgccagccg tcgggcgcgt agcccaaacc ataatgcgcg atgacttccg
     4801 cgctcaagcc gcgtttgtcc aaataagctt tcgcagccgg attgaatttc agctgctgcg
     4861 cgtaaaaatc agctgccgcc gccgtcgttt cttccagcgt ctgctgtttt ttcttgcgct
     4921 cggcacggac ttcgggatta tcgttctgcc cgcgcacttt aggcacaatc atacctacgc
     4981 ggtcggcaag gaactgaacc gcctccggaa acgacagtcc ctgatgttcc atcacaaaac
     5041 caatcgccga accatgcgcc ccgcaactga aacaatgata aaactgcttg gtcggactga
     5101 ccgaaaacga cggtgttttt tccttgtgga acgggcaaca cgccatatag ttcgccccgc
     5161 cttttttcag cggaacctgc tcgtcgatga tgccgacaat atcggttttg gccagaagct
     5221 cgtcaatgaa gtcggatgga atcatgatgt ggggggacgg gatgtctgtt ttcggtacgg
     5281 acggtacgaa atcgggattt ttcggaatgg cggtcggatg tggcggttca ggcaaaatgc
     5341 cgtctgaagc cggaaaccgg atgttcagac ggcatttgcg ttcaaacgct taagccaatt
     5401 tgccgtggca ttgtttgtat ttcaaaccgc tgccgcaggg gcaggggtcg ttgcggtgga
     5461 cgatttgtcc ccgcgcttcc aaggcttcgg ggctgaaatc cgtcccatcg ggattaaagg
     5521 cttcggtaac cagatcggtt tgcgactgac ccaaaagttc ttctatatcg ggcgattcgg
     5581 aatggatgga ctggatgttg ccgacgggtt gctcttcaac cgccgcgaca gggttttgtt
     5641 cgatttgaac cgaagtaagc agggaggcga tatggaattt gatgccgttc cacaggtctt
     5701 ggaacatggt aaaggcttcg cgtttatatt cctgcttcgg atttttctgg gcatagctgc
     5761 gcaggtgtat gccttgtcgc aggtagtcca tggcggcaag atgttcgcgc cattggttgt
     5821 cgatggcctg caacatcacg ttgcgctcga aatcagccat tgcctgcttg ccgaccagtt
     5881 cggttttggc ggcatattcg ttctcgatac gttcgatcag gcgctctttg atgtcttgac
     5941 cgtcaatcgc attgtccgcc ttcagccagg attggatgtc ttcctgaagc ctgaattcgg
     6001 cagccaggcg gttttccagt gtcgggatgt cccattgttc ttccatgctg tcgggcggca
     6061 tataggtatc cacgaggtcg ctgacggcat cagaacggat ttcctgcatc aggtcgccga
     6121 tgtctttgct ggtcagaatt tcgttgcgct ggctgtaaat gactttgcgc tgttcgttgg
     6181 caacgtcgtc gtattccaaa acctgtttgc gcatatcgaa gtttctgcct tcgactttgc
     6241 gttgcgcccc ttcgatttgg cgcgtcagca ggttgtgctc gatggcaacg ccgcgttcgg
     6301 gggcgaggcg gttgaggatg gcggcggcgc ggtcgagtgc gaagaggcgc aacagcgggt
     6361 cttcaaacga gaggtagaaa cggctggatc cggggtcgcc ctgacggccg gaacgtccgc
     6421 gcaactggtt gtcgatacgg cggctttcgt ggcgttccgt accgatgatg tgcaaaccgc
     6481 ctgcttccat cactttatcg tgttctgcct gccagccgtt ttcgagtgcg gcgatttgtg
     6541 cctgtttctc ttcgtcgctc aaggtttcgt cggcgcggat ggcatcggtt tggtgcttca
     6601 ggttgccgcc taaaacgatg tccgtaccgc gtcccgccat attggtggcg acggtaattg
     6661 cgccgacttt gccggcttgg gcgacaatca gggcttcgcg ttcgtgttct ttggcgttga
     6721 ggacgttgtg cggcagtccg gctttttgca gaaggcggga gaccagttcg gagttttcga
     6781 tgctggtcgt accgacgagg acgggctgcc cgcgtttgtg gcattcctcg atgtctttga
     6841 cgacggcttc gaatttttct tcggcggaac ggaaaatctg gtcgttgaag tctttgcgct
     6901 gtacggggcg gttggtcggg atgatgacgg tttcgaggtt gtagatgctt tggaactcga
     6961 aagcctcggt atctgccgta ccggtcatac cggagagctt ggtgtacagg cggaaatagt
     7021 tttggaaggt gatggaggcg agggtttggt tttcgcgttt gatttccacg ccttctttgg
     7081 cttctacggc ttgatgcagg ccttcggacc agcggcggcc ggacatcaga cggcctgtaa
     7141 attcgtcaac gatgacgatt tcgccgtctt ggataacgta atgttggtct ttgtggaaca
     7201 gcgagtgcgc gcgtaatgct gccataaggt ggtgcatcag ggagatattt gccgccgagt
     7261 acagcgagtc gttttctgcc agcagcccca tttgggtcag gatttgttcg gcgtgttcgt
     7321 gacctgtttc gctcaggatg acctgatgtg ccttttcgtc gacccaatag tcgccttcgc
     7381 cttcttctgt ctcttgacgg acgaggtggg gcggaacggt gttcatgatt tggtagagct
     7441 ggatgttgtc gtctgcctga ccggagataa tcagcggggt gcgcgcttcg tcaatcaaga
     7501 tggagtccac ttcatcgaca acggcaaaat tcaattcgcg ctgcactttg tcgtattggt
     7561 cggttaccat attgtcgcgc aggtagtcga agccgaattc gttgttcgtg ccgtaggtaa
     7621 tgtcggcagc gtaggcgttt tgacggtcga acggctgcat atctgaaata atcacgccga
     7681 cggtcagacc gaggaaattg tagagcggct ccataatgcc tgcgtcgcgc gaggcgaggt
     7741 agtcgttgac ggtaacgacg tgcacgcctt tgccggccag cgcgttgaga tagacggcga
     7801 gggtggcgac cagggttttg ccttcgccgg tacgcatttc ggcgattttg ccgtcgtgca
     7861 gcaccatacc gccgataagc tgcacgtcga agtggcgcat accgagtacg cggcgggacg
     7921 cttcgcggca gacggcgaag gcttcgggca aaatgccgtc caaagtctga ccgtcggcga
     7981 ggcgttgttt gaattcggca gttttggctt gcagatcagc atcgcttagg gcttgcatct
     8041 gttcttcgag cgcgttgatt ctggcaacgg atttacggta ttgtttcagc aagcggtcgt
     8101 tgcggctgcc gaagattttc ttggcaatgt ttgtcagcat gaataattcc tgcgcctgat
     8161 ataatagtgg ggcgaaaacg cgattttaac acaagcgttt gtgcaaagtg ctaatgccgt
     8221 ctgaaataaa ggcgcgtttg cggtatttca atcttttggg gtgtatgttt tatgaatttg
     8281 gaacagttgg gcaggcggga cgcgctgctt tccggacttt tgaaacaggc gggacagtgg
     8341 cggcggttgg atgctgccgt gaaaaaactg ctgcctgcca acctgcaccc ccactttcag
     8401 acggcatgta tcgaagacgg caggcttgtc cttttggcgg caaacaatat ggcggcatcg
     8461 cgtttgaaga tgattgcccc gtcggtattg ccgcagctgg cagggcttga tgcttcgata
     8521 cggtctgttt cggtcaggct ggttccaaaa ccggaaaaac cgccgaaaac caataccctg
     8581 catttgagta aggctgcgtt ggagagtttc gattcggcgg cggcaaagtt ggaagaacgg
     8641 catcccgaat tggcggaggc actggaggag ctggtcagga agtacggggc ataaggcggc
     8701 cggcagggat gttgtaaata tccgttaata tttgcgcggc gggggacggc tgccctaata
     8761 ctaaagaaat aggttcgggg taagattgcc ctttttttgg gtaaacgatt gtaaacttgc
     8821 aaacaggctt tgatttcaaa tgaagtttgt agcaaaatgc cgccccgaaa catctgtttg
     8881 tgcaacacgg cggaatcttt ttcaaggttt tgttaatggc ggttgcactt tgatttccgt
     8941 aaaaccgaat attattttat cgattggaga tttaccatga aagcttatct ggctctgatt
     9001 tctgccgccg ttatcggttt ggctgcctgc tctcaagaac ctgccgcgcc tgctgccgag
     9061 gcaactcctg ccggtgaagc acccgcttcc gaagcgcctg ccgccgaagc tgctcctgca
     9121 gatgctgccg aagcccctgc tgccggcaac tgtgcggcaa ctgtcgaatc caacgacaat
     9181 atgcagttca acaccaaaga catccaagtc agcaaagcat gtaaagagtt caccatcact
     9241 ctgaaacata ccggtacgca acccaaagcc agcatgggtc acaaccttgt gattgccaaa
     9301 gctgaagaca tggacggcgt atttaaagac ggcgtaggtg ctgccgatac cgactatgtc
     9361 aaacctgacg atgcgcgcgt tgttgcccac accaaactga tcggcggcgg cgaagagtct
     9421 tccctgactt tggatcctgc caaattggct gacggcgact acaaatttgc ctgcaccttc
     9481 ccgggtcacg gtgctttgat gaacggcaaa gtgactttgg tcgattaatc cgcttaaagt
     9541 ttcaaaagac agacagcctg ctttgtgcag gctgttttat tataaaatga ctgcttgaaa
     9601 agtccccgtt gagaacgaaa acatgaatcc gtttgaaacc caaagcgtta cctttgccga
     9661 accgattgaa atgctgtatg cctgccacgg caaagtgcgc cgtttttgcg gccagattgc
     9721 tatgttgtcg ggctatatcg ccgaaaacgg ctgcaatcag cttgttttgc aaaccatccg
     9781 ccaaatctcc cggtatttca acgttgccgc gccgctgcac catgaggacg aagaagaaaa
     9841 ctttttcccg ctgctgctgc aatacgcgcc gcaagcccgt gaaggcgtgg acgagctgtt
     9901 gcgccaacat atcgggctgt acgacaactg ggcggctgtt tccgccgaat ttgccaaact
     9961 cgaagcagac aacgcttata tccccgatgc ggaagcgttc aaacgctttg tggagggata
    10021 tgatgtgcat ctggcgattg aagagccttt gttcgacatg ggcaaaacgt ttatccccga
    10081 agagaagctg accgaaatcg gcgaaatcat ggcggcgcgc cggtgcaaat aatgccgtct
    10141 gaaacaatcg tctcaaggat atattatgct gacgcccaaa agctgcgatt tgttcaatat
    10201 cccgtttttc cagtttgccc agctcaaaaa ataccagccc gagagcattc cgcaaatcaa
    10261 agccgactac aaggaaaact ggcagatatg gcagcagttg atacagcagg tcgccgcaga
    10321 tttgagcgaa cctttcgccc cgccgcatat cgaacgctgg tgtaacggct ggcaggttcg
    10381 cgcccatttc ttcgcctact tcaaatacgc ccaatacaaa aattccgccg ccatcctgtc
    10441 gatactgctc aaccgccgcc gcctgagcgt cagcttggac tggcattgct acaaagccga
    10501 cgtgtcgccg attgcgctgc ccgagtacaa ccgctggctg gatgatttcg ataccgaaaa
    10561 atacgccgca ttcgatatgt ggcacggcgc ggaaagcgaa tatgacgact accgcaccgt
    10621 cgcacaacaa agcgaatccg accgaaggtt gcaaaacgac gaagactttt tctgcatcgg
    10681 caaacacatt gagcgcgacg atttgggcaa gcaggatgta gcaaaatgga tagccgaaac
    10741 ggtggaagat ttactgccgc tttacgaagc ctgtcacggc aaatgattca gaaaactgac
    10801 gggtacgaat gcccgtctta tacaccaatc caacccggag gtcgtctgaa aatcagcttc
    10861 aggacatttc agacgacctg atttccaaag tgaacaaaat gaccgaaacc caatccctag
    10921 aactcgccaa agcgttgatt tcccgcccgt ccgttacccc cgacgaccga gattgccaaa
    10981 aactgcttgc cgaacgcctg cacaaaatcg gttttgcggc tgaagaactc catttcggcg
    11041 acaccaaaaa catctggttg cgacgcggca cgaaagctcc cgtcgtctgt tttgcagggc
    11101 ataccgacgt tgtgccgaca ggtcctgttg aaaaatggga ttcgcccccg ttcgaaccga
    11161 ccgagcgcga cggaagatta tacgggcgcg gcgcggcgga catgaaaacc agcatcgcct
    11221 gtttcgttac cgcctgcgaa cgctttgttg ccgaacatcc cgaccatcaa ggcagcattg
    11281 cactcttgat tacttccgac gaagagggcg atgcactgga cggcacgacc aaagtcgtcg
    11341 atgtgttgaa agcacgcgga gagttgattg actactgcat cgtcggcgaa ccgaccgccg
    11401 tggacaaatt gggcgatatg attaaaaacg gccggcgcgg ttcgctgtcg ggcaatctga
    11461 ccgtcaaagg caagcaaggg catatcgcct atccgcattt ggcggtgaat cccgtgcata
    11521 cttttgcccc ggccttgtta gagctgacgc aggaaatttg ggacgaaggc aacgaatatt
    11581 tcccgccgac cagctttcaa atttccaata tcaacggcgg cacaggcgcg accaacgtca
    11641 ttccgggcga gttgaacgtc aaatttaatt tccgcttctc cacagagtcc accgaaacag
    11701 ggctgaaaca acgcgtccac gccattttgg acaaacacgg cgtgcaatac gatttgcagt
    11761 ggtcgtgttc gggacagccc ttcctgaccc acgcgggcaa actgaccgac gtggcacgca
    11821 ccgccattgc cgaaacctgc ggcgttgagg ccgaattgtc caccaccggc ggcacttcgg
    11881 acggacgctt cattaaagcc attgcgaaag aactcatcga attaggcccg tccaatgcca
    11941 ccatccacca aatcaacgaa aatgtgcggc tggacgatat tccgaagctg tcggcggtgt
    12001 atgagaggat attggcgcgg ttgttggctg aaaaggccgt ctgaaaagaa gatgggctgg
    12061 ttgtcggata tggatgtccg acaatctgat tagacccaac atgagtttga gataacgcat
    12121 tgatttttat gtagagcgat ttatttgaac ggtaatccat tccctctccc gtgggagagg
    12181 gttagggaga gggcattggg acggcaacgg aaatattgtc tgtatctgcc acgttttacc
    12241 ctccctccga ccctccccac aggggaggga gctaagttgc aggcacaccg acggaatatg
    12301 gttgaaaccc tgcccttcag ggcagtagaa ttttggttta ttttttggga agtaacccct
    12361 tccaaatcag ggtaaacagg gctgcgcctt atgtgcggcc ctgtgtgttg aaacattgag
    12421 gaatataacc gtgccgtcaa attactttca tacgcgtgaa cgattgggtg ctttaggcgg
    12481 catcgtgcaa catcataccg ccttgtaccg cagcgtggcg gtatatgaac cgaccgtggt
    12541 tatcgtgcgg cgcggatgca agaagctgcg gtgggcgggg cgcgaattga ggattgcggc
    12601 gggtgaggct gtcggcttgg caggcgggca gacgtttgac gtcatcaata ttcccgattc
    12661 agacggcctc tatcaggcgc aatggattgc tttcgaacag gaaaccgtag aaaggttcgc
    12721 cgcacaatac gggacggcgc aggcagtgtg cgatgcggtg aagctgccgc accccgggcg
    12781 tatgggcgcg gcgtttgatt atgcggctgc ggtactggcg gatgaagaag tgccgcacaa
    12841 tgcggcggag gccgcgcttt gcggcgtgtt ggcgtggttg cagcatgacg gcatcggttt
    12901 tgccgtgtac ggaggcgtca acctgatgcg gcaaatccgc aaactgatta ctgccgatat
    12961 ggctgcggac tggtcgtcgg caatgctggc gcagcggctt aattgcagcg aggccgcgtt
    13021 gcggcggcgg ttggcgcggc aggacacgaa tttccgtacg ctgctgacgg atgtacgcat
    13081 gatgcgtgcg ctgacgctgt tgcaggttac gcaatggtcg gtagcgcaga ttgccggcgc
    13141 ggttggctat gactgcccgt cccgtttcag cgcgcgcttc aaagagctgt tcggttgcgt
    13201 accgtcggtg gtccgctcgg aagcggagcc ggcggcatat cggcgcacgg ggcaggtcag
    13261 cgtcggtgtt cgaccgtgaa tttcgcttcg cccaagctgt ttgccttagt ggagaaaccg
    13321 accagcacgg gtgtggattc ggcggtgatg ttcggcagct tggcgacttt cagcgcggta
    13381 agcgtgaatt cgtagcggtg tttcctgcct tcgggaggac acgcgccgcc gtagcccggc
    13441 gcgccgaagt ccgtgcgggt ttgcagcgcg cctttgggcg gcctgcctca ttgtgcggta
    13501 atgcctgcgg gcaggcggcg gacatcggcg ggaatgtcgg cgaccaccca gtgcatccgg
    13561 tccagaccga tcggcgcgtc tttatcgtaa acggtcagga cgaaactttt tgtccctgcg
    13621 ggcgggtttt tccacgacag cgcgggcgaa gcattgccgc ccgaacagcc gaagccgtaa
    13681 ggcgcgctca aaagctggtt ttgcgtgaag ccgccgtctt cggacgggtt gtcgaattgc
    13741 agcgtgaatg cgcccccggc aaaggcagcg gttgaaaaag ccagcagtac ggcggagagg
    13801 atgcgggttt gcatagatga ttcctttgct tgatgaataa gcggattcat tataggctgt
    13861 caacggcggc aggaatgtgc cgaaacggtt ggatgatgtg ccggaatgcg caaatgcaaa
    13921 aatcgtggtt tcagacgacc ctttgaaggc cgtctgaaat ttttcatagg gcgacgcttt
    13981 atgtgtcgtc ctgtgtgttg aaacattcct ttccctgatg ctttggaaat attgtatatt
    14041 taggcattgc cgcaaccaga ccctcaaggt ttccgccgca gcctgttcct gtaccggcgt
    14101 gcgggaatgg cggaaatcgg ggatttcgcc gtcaaattta tgatagggat acggagcaaa
    14161 cgaatgatta ccctgccttc cttaaacaat ctgccgtcaa aatgggatga aatccgccat
    14221 tgcctcgaaa cccgggtttt tgagtgcggc gttatgccgt atcccaatct gacggaatgc
    14281 gaagccgggc agttcgagcg ggatttttgg gacaatatcg gctgcgcgcc tgaagaatat
    14341 gtccgtatcc gccgcgccat ccgtctgttg gaattacgtt atcccgacag cttgaacgag
    14401 ctggtgtgtg ccgctattgc cacgcctttg ggcgagatgt tggcggtgtt cggcgttaag
    14461 ggattgtgcc tgctggagtt tgtcggacag aagtatttgg aacaggaaat tgccgccgtc
    14521 caaaaagcct tgcgcggacg gtttgtgttt cgggaagacg ggcggatgca atttttgcgt
    14581 caggaattgg acttatactt caagggtcat ctgaaaacct ttgccacgcc tttggagcag
    14641 attggcaccg agtttcaaaa gcaggcatgg gacgcgctct tggcgattcc ttacggcgaa
    14701 acgcgcagct acaaagagca ggcgcagcgt ttgggcaacc ccaaagccgt ccgcgccgtt
    14761 gccgccgcca acgggcagaa caaggtgtct gtcatgattc cctgccaccg cgtcatcggc
    14821 agcgacggca aactgaccgg ctacgcgggc gggttgaacc gcaaacagtt tttactggct
    14881 ttggaacgcg gcgaagttca gacggcattg ttttaagcgg ggaaatgcag aacggctcat
    14941 cgggcttaaa tatggtgtga tgacggctgt gaaaattcat acaacggcaa tccttttaag
    15001 gcatcggtct taatgtcttt ctgattcata tgcttgtcgt tttgtcgccc atttttccaa
    15061 aattaaggat tgacacattt tttccggacg ctataatacg ccccattccc cgatagctca
    15121 gtcggtagag cgacggactg ttaatccgca ggtccctggt tcgagcccag gtcggggagc
    15181 cagaattttg aagcccaaac ttgaatgttc gggctttttc acatttgcac gtccggcgct
    15241 cggaatgcgg cgagataggt tttccaacgg tttcgcggta aaattctgcc tgtctgattt
    15301 cggtttcgtt ttatgtctat caaaatcctg attatttctc ccagttggat aggcgactgc
    15361 gtgatgaccc agcccttgtt ccgccgtttg aagaaacttc atcccggttg cacgattgat
    15421 gtgttcgcac cgaagtggtc gatggcggtg ttcgagcgta tgccggaagt gaatgagatt
    15481 cttgaaaatc cgttcggaca cggtgcgttg gagctgaaac gccgttggcg ggtcggcagg
    15541 gagttgggac ggcgcggata cgacagggtt atcgtgttgc cgggttcttt gaagtcggca
    15601 gtcatcgcgc tggcaacggg catcggaaaa agaacgggtt atgtcggcga aagccgttat
    15661 tttctgttga acgatatacg caggctggat aaggaacgtc tgcctttgat ggtggaccga
    15721 tatacggctc tcgcgcatca gagtcaggaa gattttgacg ggcattcggg attccccgag
    15781 ttttccattg atgaacggcg gcgggaaatt tctattgaaa ctttcggttt gaatcttgga
    15841 aagcctgttc tggctttttg cccgggtgcg gaattcgggc cggcaaagcg ttggccggca
    15901 aggcattttg ccgagttggg caaacgctat tcggaggcgg gttggcaggt ttggttgttc
    15961 ggttcgcaaa aagatgatga aatcgccgaa gaaatcaact gcctttcaga cggcatgtgt
    16021 gtcaatttgt gcggcaaaac cgatttgtcg caggcaatgg atttgctgtc gttggcggac
    16081 acggtcgtgt gcaacgacag cgggctgatg catttggcgg ctgctttggg caggaaggta
    16141 gtggcggttt acggttcttc cagcccgacg catacgccgc ctttgagcga cagggcgaaa
    16201 atcgtcagcc tgcacttgga atgttcgccc tgtttcaaac gtgaatgccc gttggggcat
    16261 accgactgcc tcaacaggct gtatcccgag aagattgtgc aggcggttga agaggcggta
    16321 tgatggcttc tgttttcgga tttataccgt ctgacggcgg atattgatag gatgtttatg
    16381 gctattgcga acaataaaaa agcatttcac gattttttca ttgaagaccg gattgaagcc
    16441 ggtttggtct tggaaggctg ggaagtcaaa gcaatccgcg ccgcgcgcgt acagcttaaa
    16501 gagagttata tctattggaa aaaagatgcg ttttatctgg tcggctgcca tattacggct
    16561 ttgcctacgg cttcgacaca catcaaaccg gatgccgtac gtccgcgcaa actgttatta
    16621 aaacagtcgg aaatcaataa gttaatcgga aaaaccgaac gtgcaggtta caccatcgtg
    16681 ccgctggatt tgcatttttc acgcggaaaa atcaagatgg aaatcggttt ggcaaaaggt
    16741 aagaaacagc acgataaacg acaaagtatg aaggaagccg actggaaacg cgagaaacag
    16801 cggttgatta agcatacgcg ctgattgtgg aaacaatgct tcagacggta cgggcaaggc
    16861 tgccgcctga tgcgtaaacg ttctacacct aaaccagcat ccgctttaat cagcacggca
    16921 tgatgcccca aaccttcgtc aaaggtttga gcaatttgat gataaattgg cattagccaa
    16981 gggtaaagtg cggtcatttt tcctgaaatt tttgtaaata acgagggcaa ttatacacat
    17041 tttcaaaccg gcttgacaaa atagcaaaaa gcaaacgttt acttttaata aataagaaat
    17101 aaatagagaa aatttgaact aaatgacatt ttttgttcag ttttatgcta aaatccacgc
    17161 cctatttatt tttacttgac aaaggaaaat ttattatgaa actcgaagca agcaagcaga
    17221 agtttaaaaa atcatttatt ataagtctat ttttttctat tctttatacc tctccgcttt
    17281 tggctgttga ttacgtttac gacaattcta aattaacaaa tgagcaaatt gatcgcttaa
    17341 aaaaaactta gagataaaag cagcgaatac tggaaacaag aaacttatct tttaaaaccg
    17401 acgaatggta gctctcagaa ctctctcaaa gttcccgcac tatcctctaa aacacaccaa
    17461 ttcgaaaaca tcaacaactc aaaaaagatt tctttttatg acaaggaata cactgaagat
    17521 taccttgttg gcttcgcccg aggtttcggg gttgaaaaaa gaaatgggga agaagaaaaa
    17581 ccactccggc aatattttaa ggactgtgta aatactgaga attccaataa tgataattgt
    17641 aaaatttcat ccttcggaaa ctatggccca atattaataa agagcgatat tttcgcctta
    17701 gcatcacaaa taaaaaatag ccatatcaac agcgaaattt tatctgtagg taattatatc
    17761 gaatggcttc gcttcgccca acacttaatc agctttctag ttggcaagag catctctatt
    17821 ctgatgtaga tccattccac tatattgagg ttacagacaa ctcgcacgtt atcgggcaaa
    17881 cgattagttt ggatgaattc cacttagaaa attctctctg ggaaccccgt tgggattctg
    17941 atgttgggga gttaaaaaca acgaatgcag acatccgttt taatactaaa agtgaaagtt
    18001 tactcgtaaa agaagattat gctggcggag ctcgttttcg ttttgcttac gatctaaaag
    18061 ataaagtccc tgaaacacca gttttaactt ttgaaaaaaa tataactggc acttccgaca
    18121 tcatcttcga aaatccaata gacgatttaa aaagcctcga cgggcatcaa attatcaaag
    18181 taaatggcac agcagataaa cacgcattcc gtctttctgg caaacatcaa aagggaattt
    18241 ataagctctc tttacaacaa cgccaagatg gcttttttac caaagtgcaa gaacgcgatg
    18301 atattgcgat ttatgcacaa caggctcaag ccgccaatac tttattcaac ctacgtttga
    18361 acgacaaaaa cagcaatatt tttgaccgca ctttaccacg caaaggcttg tggttgcgtg
    18421 tgattgacgg acattccaac caatgggtgc aaggcaaaac agcacctgta gaaggctatc
    18481 gaaaaggtgt gcaactcggc ggcgaggtgt tcacatggca aaacgaaagt aatcaacttt
    18541 ctattggctt aatgggcgga caagcagaac aacgcagcac tttccgcaat ccggatacag
    18601 acaatcttac aacgggaaat gtgaaaggct ttggtgcggg cgtttacgcc acttggcatc
    18661 agcttcagga caaacagaca ggtgcgtatg ttgatagctg gatgcaatat caacgtttcc
    18721 gccaccgcat taacactgaa tatgctacag aacgttttac ttcaaaaggt attactgcct
    18781 caattgaagc gggtcacaat gcgttattgg cggaacactt cactaaaaag ggcaacagcc
    18841 ttcgtgttta cctacaacca caggcgcaat tgacttattt gggggtaaac ggaaaattca
    18901 gcgatagcga aaatgcccaa gtgaatttgc ttggctcccg ccaattacaa agccgagtgg
    18961 gcgttcaagc taaagcgcaa tttgctttca ctaatggcgt cactttccaa ccatttgttg
    19021 ctgtcaattc aatctaccaa caaaaacctt tcggtgtgga aatagacggg gatcgtcgag
    19081 tgataaacaa taagacggta attgaaactc aattaggtgt agcagcgaaa atcaaatctc
    19141 acttaacctt gcaagcctca ttcaaccgcc aaacaagcaa acatcatcac gctaaacaag
    19201 gtgcgttgaa tttacagtgg acgttttaag ttaaattgta acaaaataaa atcggcaggg
    19261 aaattcactg ccgattttat tattttaaaa gtgcggtcat ttttcgtgta atttccacca
    19321 atttttaccg cactttcaat ttcagcttga acaagttcaa tagtctgctc tgcattaatt
    19381 acgactgctt ttggattatc ttttactaat tctaaatagc gtgctcgagt gcgatggaaa
    19441 aaatctaaat ccatttgctc aatacggtct aactcgccac gtccacgagc tcgcgctaaa
    19501 ccgacaatcg gatctattgt ccttttcttt gttgtgtatg caaatcagaa atgccggtta
    19561 cggaagcagt ttgccaggat tcataatgtt atatggatca aggtgttgtt tgatgctttt
    19621 catcagggca atttcagagg gcgtgcggac agcgggcagc cattgttttt tgatgatacc
    19681 tatgccgtgt tcggcggcaa tcgtgccgtt gcgggcaagg acgttgcgat agactgtgct
    19741 gttgatgtcg ttttcgtaac ggtaaacttc attgctgagg atttcgggcg gaaaagtatt
    19801 gtagtgcagg ctgccgtcgc ccagatgtcc gaagcagacg atttgtatgc ctttgaaatt
    19861 ctgttccaaa tctttggcgc actggcggac aaagtcggca acgcgcccga taggaacggc
    19921 aatatcgtgt ttgatgctgg tgcccagttt gcgttgggag gcggagatgt tttcgcgcaa
    19981 cgcccacata tggatacgtt cttgttcgct ttgcgccaat acgctgtcgg taaatccttt
    20041 tttataaaga aattcgacaa gccgatcatc aagattgctg tcgggtaatg agtcggtcaa
    20101 ctcaagtaaa atatgccatt ctgaatgtgt cggcaggggg agtttgctga attcggaaga
    20161 caactcggcg gcaaaacggc cgatcagttc aaaactgcat aagcgttcgg caaagtgcgc
    20221 ttgggtttcg gtcagcaggc ggacggcgga ttcgatgtcg ggaatgccga cccatgccgt
    20281 tgccttgtcc gagggacggg caaaaagctt gagcgtggcg gcagtgatga tgcccagtgt
    20341 gccttcgctg ccgataaaca gatggcgcag gtcgtagccg gtggtgtttt tatgcagggg
    20401 atggagatgg gaaaccagtt cgccgttggg gaggacgact tccaaaccga taaccaggtc
    20461 gcgcatcgtg ccgtaacgca atacgttcaa acctccggca ttgcaggcga tgttgccgcc
    20521 gatttggcac gagccttcgc tggcgagact gagtgggaac agcctgtttg aggcttcggc
    20581 tgcctgttgg acggtttgga gtacggaacc tgcttcgacg gttatgcagt tgtctgacaa
    20641 attgatgctg cggatgcggt tgagtttgga aaggttcagc aatacgccgt tttccgatac
    20701 tgccgcgccg cacaaaccgg tattgccgcc ttgcggcgta accggaatgc ggtgttcgta
    20761 acaaaaacgc ataatggttt gcacgctttc aacgctgcgc ggctgcaaaa tgatgtctgg
    20821 tgcagacgta aagcggttgc gctgatcttt taaaagcgtc ggagaaggtt cggcaatttc
    20881 atctgccggc aggagtcggg aaaattcggt atgaaggtca ggcatgtttg tcggaagggt
    20941 agggagaaga ttgaggaagg gaatctgatg ccgtctgaaa aatcaaaaaa gcaggatact
    21001 gaacgtatcc tgcttttttg caagcggaaa atgcttattt tgcagcttcg gcagcaggag
    21061 ctt
//
LOCUS       DAXFZM010000029        21036 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.029, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000029 DAXFZM010000000
VERSION     DAXFZM010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21036)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21036)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21036
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.029"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(170..2923)
                     /gene="tbpA"
                     /locus_tag="ACFJAG_000921"
     CDS             complement(170..2923)
                     /gene="tbpA"
                     /locus_tag="ACFJAG_000921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent transferrin-binding protein TbpA"
                     /protein_id="HFC3980248.1"
                     /translation="MQQQHLFRLNILCLSLMTALPAYAENVQAGQAQEKQLDTIQVKA
                     KKQKTRRDNEVTGLGKLVKTADTLSKEQVLDIRDLTRYDPGIAVVEQGRGASSGYSIR
                     GMDKNRVALTVDGLAQIQSYTAQAALGGTRTAGSSGAINEIEYENVKAVEISKGSNSV
                     EQGSGALAGSVAFQTKTADDVIGEGRQWGIQSKTAYSGKNRGLTQSIALAGRIGGAEA
                     LLIRTGRHAGEIRAHEAAGRGVQSFNRLAPVDDASTWAYFIVEEECKNRDYETCKAKP
                     KKDVAGKDERQTVSTRDYTGPNRFLADPLSYESRSWLFRPGFRFENKRHYIGGILERT
                     QQTFDTRDMTVPAFLTKAVFDANSKQAGSLRGNGKYAGNHKYGGLFTSGENNAPVGAE
                     YGTGVFYDETHTKSRYGLEYVYTNADKDTWADYARLSYDRQGIGLDNHFQQTHCSADG
                     SDKYCRPSADKPFSYYKSDRVIYGESHRLLQAAFKKSFDTAKIRHNLSVNLGYDRFGS
                     DLRHQDYYYQSANRAYSPKTPPQNGKNSPNANPNGGKDNPYWVSIGRGNVVTGQICLF
                     GNNTYTDCTPRSINGKSYYAAVRDNVRLGRWADVGAGLRYDYRSTHSDDGSVSTGTHR
                     TLSWNAGIVLKPADWLDLTYRTSTGFRLPSFAEMYGWRSGDKIKAVKIDPEKSFNKEA
                     GIVFKGDFGNLEASWFDNAYRDLIVRGYEVQIKDGKEGVKGDPAYLNAQSARITGINI
                     LGKIDWNGVWDKLPEGWYSTFAYNRVRVRDIKKRADRTDIQSHLFDAIQPSRYVVGSG
                     YDQPEGKWGVNGMLTYSKAKEITELLGSRALLNGNSRNTKATARRTRPWYIVDVSGYY
                     TVKKHFTLRAGVYNLLNHRYVTWENVRQTAAGAVNQHKNVGVYNRYAAPGRNYTFSLE
                     MKF"
     gene            complement(3010..5151)
                     /locus_tag="ACFJAG_000922"
     CDS             complement(3010..5151)
                     /locus_tag="ACFJAG_000922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HFC3980249.1"
                     /translation="MNNPLVNQAAMVLPVFLLSACLGGGGSFDLDSVDTEAPRPAPKY
                     QDVPSKKPEARKDQGGYGFAMRFKRRFWMPRGKEDEVKLKESDWEETGLPDDPKNLPK
                     RQKSVIDGVKTDDGSNNIHSSPYLMQSNHQNGSTNGGANQPKNEVTGYKDFKYVYSGW
                     FYKHAKSEIKRENGSNSAKSGNDGYIFYHGKKPSRQLPASEKVIYKGVWHFVTDTKKG
                     QKFNDILGTSKGQGDKYSGFSGDDDEQYSNKDQSMPKDGQEGYGFTSNLKVDFNNKKL
                     TGKLIRNNRVTNTTPNDKYTTQYYSLDAQITGNRFSGKAMATEKGENKQHPFVSDSSS
                     LSGGFFGPNGEELGFRFLSDDGKVAVVGSAKTGDKAENGAGNGALGGASVSASNGATG
                     TSSENGKLTTVLDAVELTLKDKEIKDLDNFSNAAQLVVDGIMIPLLPTESGNGQADKG
                     KNGGTDFTYKTTYTPESDKKDTKAQTGAGGMQTASGAAGVNGGQAGTKTYEVEACCSN
                     LNYLKYGMLTRKNSESAMQAGESSSQAAARTAQGAQSMFLQGERTDEKEIPKEQNVVY
                     LGTWYGHIANGTSWSGNASNETGGNRAEFTVNFDAKKINGTLTAANRQEATFTIDAMI
                     EGNGFKGTAKTGNGGFAPDQNSSTGTHKVHIANAEVRGGFYGPEAEEMGGWFAYPGNG
                     QAKNAQTSPGNGNSAGSATVVFGAKRQKLVQ"
     gene            7130..8239
                     /gene="fic"
                     /locus_tag="ACFJAG_000923"
     CDS             7130..8239
                     /gene="fic"
                     /locus_tag="ACFJAG_000923"
                     /EC_number="2.7.7.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_function: GO:0070733 - AMPylase activity [Evidence
                     IEA];
                     GO_process: GO:0018117 - protein adenylylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein adenylyltransferase Fic"
                     /protein_id="HFC3980250.1"
                     /translation="MSNWKPDIPYNDLPPLPPKQDIESKTILKRCIAARASLARLKQA
                     AELIPNQAMLINTLPVMEARASSEIENIVTTTDKLFQSLQMDTERQDPATKEALQYRT
                     ALFAGYESLASRPLCTQTAIMVCNAIKHPYETAIRKTGGTALKGGNSGNVVYTPPEGE
                     ETIRGKLANWERFIHESGDLDPLVIMAAAHYQFEAIHPFTDGNGRTGRILNSLLLIEK
                     GLLDLPILYLSRYIIENRADYYRLLLGVTERQDWESWIIYILDGVADTADWTVSKIDA
                     IRCLFEQTRQHIRTHAQGIYTHELVNLLFEQPYTRIANLEAAGIAKRQTASKYLKELS
                     GIGVLQEIAIGRDKLFIHPRLMELLRGEGNSFTSF"
     gene            complement(8967..9779)
                     /gene="murI"
                     /locus_tag="ACFJAG_000924"
     CDS             complement(8967..9779)
                     /gene="murI"
                     /locus_tag="ACFJAG_000924"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008881 - glutamate racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HFC3980251.1"
                     /translation="MENIGRQRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARV
                     PYGTKSKATIENFSMQIVDFLLGHDVKAMVIACNTIAAVAGRKIRQKTGNMPVLDVIS
                     AGAKAALATTRNNKIGIIATNTTVNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGW
                     LEHEVTRLTVCEYLKPLLADGIDTLVLGCTHFPLLKPLIGREAHNVALVDSAITTAEE
                     TARVLAQEGLLDTGNNNPDYRFYVSDIPLKFRTIGERFLGRTMEQIEMVSLG"
     gene            9968..10429
                     /gene="tsaE"
                     /locus_tag="ACFJAG_000925"
     CDS             9968..10429
                     /gene="tsaE"
                     /locus_tag="ACFJAG_000925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0002949 - tRNA threonylcarbamoyladenosine
                     modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HFC3980252.1"
                     /translation="MSDFSPVPRFLADEAATLDLGAAWSSRLNAPLVIYLEGDLGAGK
                     TTLTRGILRGLGHQGAVKSPTYAIVESYPLERFALHHFDLYRFSFPEEWEDAGLDELF
                     AANSVCLIEWPQQGGEFTPPADITATLTHGGGGRKCLLTAHTERGSESLPL"
     gene            10426..11676
                     /locus_tag="ACFJAG_000926"
     CDS             10426..11676
                     /locus_tag="ACFJAG_000926"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HFC3980253.1"
                     /translation="MTKLTRRQIIRRTAGTLFALSPIASAVAKTVRAPQFTAARIWPS
                     HTYTRLTLESTAALKYQHFALDNPGRLVVDIQNANINTVLHGLSQKVMADDPFIRSIR
                     AGQNTPTTVRLVIDLKQPTHAQVFALPPVGGFKDRLVVDLYPHGMDADDPMMALLNGS
                     LNKTLRGSPEADLAQNTTPRPGRGKNGRRPVIMLDPGHGGEDPGAVSPGGLQEKHVVL
                     SIARETKKQLEALGYNVFMTRNEDVFIPLGVRVAKGRARRADVFVSIHADAFTSPSAR
                     GTGVYMLNTKGATSSAAKFLEQTQNNADAVGGVPTSGNRNVDTALLDMTQTATLRDSR
                     KLGKLVLEELGRLNHLHKGRVDEANFAVLRAPDMPSILVETAFLSNPAEEKLLGSESF
                     RRQCAQSIASGVQRYINTSVLKRG"
     gene            11758..12576
                     /locus_tag="ACFJAG_000927"
     CDS             11758..12576
                     /locus_tag="ACFJAG_000927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HFC3980254.1"
                     /translation="MKGMDKLRYQRDFLNIRPIFTAGEQEYLTELSDRLPLSVLTDSV
                     RNIEEIGIDFVYSSAKLEGNTYNQYDTQALLKLGQTAGGKLYSDAVMLINLRESYRHL
                     LSGLDSPKPFDWLDFLKTTHSLISENLLEKGSGGVVRRDSVTISGTDYTPLSNPQSLD
                     TELKWLLQEAPKIENPFDRAVYLHNNLAYLRYFKDCNKRTARNCMTLSLMRSGFFPCV
                     FSPDSYPAYAEAVVAYYETGDYGLFKKYFISAYENTVNKYGPQPDVDIFRNFSI"
     gene            complement(12622..13764)
                     /locus_tag="ACFJAG_000928"
     CDS             complement(12622..13764)
                     /locus_tag="ACFJAG_000928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent RNA methyltransferase"
                     /protein_id="HFC3980255.1"
                     /translation="MNTLYTLFATCPRGLETVLSQELGSLGCTDVQAFDGGVSCRGGL
                     EQAYAANLHSRTAGRILLRLTKGTYRTERDIYKLAKNINWFNWFTLQQTFKVKIEAKR
                     ANVKSLQFAGLTVKDAVCDAFRDIYDARPSVDKAAPDVRIHAFLDERNVEIFIDTSGE
                     ALFKRGYRLDTGEAPLRENLAAGLLLSAGYDGTQPFQDPFCGSGTIAIEAAWIAAGRA
                     PGMMRRFGFEKLQNFDKTLWADLRRRAEAQTRPVRAPIAGSDNGRRIVQTALDNAHNA
                     GADDIVSFSVADAQSVRPNGENGIMVSNPPYGVRLEEVRALQALYPQLGTWLKKHYAG
                     WRVGMFTGDREMPKFMRLLPKRKIPLYNGNLDCRLFLIDMVQGSNR"
     gene            complement(13813..14235)
                     /locus_tag="ACFJAG_000929"
     CDS             complement(13813..14235)
                     /locus_tag="ACFJAG_000929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980256.1"
                     /translation="MNKNRKLLLAALLLTAFAAFKLVLLQWWQAQQPQAVAAQCDLTE
                     GCTLPDGSRVRAAAVSTKKPFDIYIEHAPAGTEQVSISFSMKNMDMGFNRYMFERQPS
                     GTWQAARIRLPVCVEGRRDFTADITIGSRTFQTAFTAE"
     gene            complement(14228..15037)
                     /locus_tag="ACFJAG_000930"
     CDS             complement(14228..15037)
                     /locus_tag="ACFJAG_000930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HFC3980257.1"
                     /translation="MIQDTRPLIRVVAGILLDSDGNYLLGSRPEGKPYAGYWEFAGGK
                     VEAGETDFQALQREFGEELGIRILAATPWLTKIHSYEHARVCLKFLWVNPDQWEGGPQ
                     SREGQEWSWQKAGDFTVAPMLPANGALLRSLSVPRRLYGSLKTGLYGENSMGAYRVLP
                     LGSAGGSGANVLMEAAQWQDRSEHAGSVWMMVQTREQWRQAQEKGADVAVWRVCDDVQ
                     AQEAAEALRQGVSVPLVLAANGQTVARYGKLWLGLGAHAVVRDETIGKNHE"
     gene            complement(15119..15496)
                     /gene="acpS"
                     /locus_tag="ACFJAG_000931"
     CDS             complement(15119..15496)
                     /gene="acpS"
                     /locus_tag="ACFJAG_000931"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008897 - holo-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HFC3980258.1"
                     /translation="MIYGIGTDIVSLKRIIRLNKKFGQAFAGRILTPEELLEFPQAGK
                     PVNYLAKRFAAKEAFAKAVGTGIRGAVSFRNIGIGHDALGKPEFFYGPALSEWLEEQG
                     ISRVSLSMADEGDTVLAFAVAEK"
     gene            complement(15546..16274)
                     /gene="pdxJ"
                     /locus_tag="ACFJAG_000932"
     CDS             complement(15546..16274)
                     /gene="pdxJ"
                     /locus_tag="ACFJAG_000932"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033856 - pyridoxine 5'-phosphate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HFC3980259.1"
                     /translation="MLLGVNIDHIATVRNARGTTYPSPVEAALVAETHGADLITMHLR
                     EDRRHIKDADVFAVKNAIRTRLNLEMALTEEMLENALKVMPEDVCIVPEKRQEITTEG
                     GLDVLAQQEKIAEFAKILTDAGIRVSLFIDADDRQIQAAYDVGAPVVELHTGAYADAH
                     SHAEQIRQFERLQNGAHFAGDLGLVVNAGHGLTIHNVTPVAQILAIRELNIGHSLISQ
                     ALFLGLPEAVRQMKEAMFRARLLP"
     gene            complement(16327..17070)
                     /gene="recO"
                     /locus_tag="ACFJAG_000933"
     CDS             complement(16327..17070)
                     /gene="recO"
                     /locus_tag="ACFJAG_000933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HFC3980260.1"
                     /translation="MSEHRVNHEPVFMLASSPWRESSLRVEAFSRRYGRVALLARSAR
                     KRQSELRGVLVPFVPASVSWYGSQELKTLHRAEWMGGWRQPQGRALFSGLYVNELVLK
                     LTAREDPMSELYDALAKVMEAVCREANHIADLRRFEWKLLNALGVAPDLHADGTGGDI
                     LADKTYRLMPEEAVMPVCRDTGALSHEAGAIVEGQSLIDLREGSFRTAESLQQALKIT
                     RLLIGTLLPEGLKSRQVLEQIRQFDRNTA"
     gene            complement(17104..18231)
                     /gene="pheA"
                     /locus_tag="ACFJAG_000934"
     CDS             complement(17104..18231)
                     /gene="pheA"
                     /locus_tag="ACFJAG_000934"
                     /EC_number="4.2.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004664 - prephenate dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0009094 - L-phenylalanine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HFC3980261.1"
                     /translation="MLECTANYRSGEIMSQTIDELLIPHRNAIDTIDAEILRLLNERA
                     QHAHAIGELKGTGAVYRPEREVAVLRRIQDLNKGPLPDESVARLFREVMSECLAVERP
                     LTIAYLGPQGTFTQQAAIKHFGHAAHTMACPTIDDCFKQVETRQADYLVAPVENSTEG
                     SVGRTLDLLAVTALQACGEVVLRIHHNLLRKNNGSTEGIAKVFSHAQALAQCNDWLGR
                     RLPNAERIAVSSNAEAARLVAESDDGTVAAIAGRTAAEIYGLDMVAECIEDEPNNTTR
                     FLVMGHHETGASGSDKTSLAVSAPNRAGAVASLLQPLTESGISMTKFESRPSKSVLWE
                     YLFFIDIEGHRRDAQIQTALERLGERASFVKAIGSYPTAVL"
     gene            complement(18270..19454)
                     /locus_tag="ACFJAG_000935"
                     /pseudo
     CDS             complement(18270..19454)
                     /locus_tag="ACFJAG_000935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754232.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug effflux MFS transporter"
     gene            complement(19591..20466)
                     /locus_tag="ACFJAG_000936"
     CDS             complement(19591..20466)
                     /locus_tag="ACFJAG_000936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HFC3980262.1"
                     /translation="MFYQILALIIWSSSFIAAKYVYGGIDPALMVGVRLLIAALPALP
                     ACRRHVGKIPREEWKPLLIVSFVNYVLTLLLQFVGLKYTSAASASVIVGLEPLLMVFV
                     GHFFFNDKARAYHWICGAAAFAGVALLMAGGAEEGGEVGWFGCLLVLLAGAGFCAAMR
                     PTQRLIARIGAPAFTSVSIAAASLMCLPFSLALAQSYTVDWSVGMVLSLLYLGLGCGW
                     YAYWLWNKGMSRVPANASGLLISLEPVVGVLLAVLILGEHLSPVSALGVFVVIAATFA
                     AGRLSRRDAQNGNAV"
     gene            20649..21036
                     /locus_tag="ACFJAG_000937"
                     /pseudo
     CDS             20649..21036
                     /locus_tag="ACFJAG_000937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261624.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
BASE COUNT         4711 a         5870 c         5551 g         4904 t
ORIGIN      
        1 agcgagaatc tatcggagaa accgaaaccc gacagacccg gatgcacgcc tgcgcgggaa
       61 tgacgggttt cgggattacg gtgtatcggg aaggatggga aacggtgggg attgtgtaaa
      121 aaaaacgccg tctgaagcct ttcagacggc atttgcggcg ttcggacgtt tagaacttca
      181 tttccaagct aaatgtgtag ttgcggccgg gggcggcata tcggttgtaa acgccgacat
      241 ttttgtgttg gttgactgcg ccggcggcag tttgccgcac attttcccaa gtaacatagc
      301 ggtggttgag gaggttgtac acgcccgcac ggagggtgaa gtgtttttta accgtgtaat
      361 aaccggacac atccacaata taccaagggc gggtacggcg cgcggtggct tttgtattgc
      421 ggctgttgcc gttgagcaaa gcccggctgc ccaacaactc tgtgatttcc ttggctttgg
      481 aataagtcag cataccgttc acgccccatt tgccttccgg ttggtcatag cccgagccga
      541 cgacatagcg cgagggttgg atggcatcaa acagatgtga ttgaatatcg gtgcggtctg
      601 cgcgtttttt aatatcgcgg acacggacac gattataggc aaatgtagaa taccaacctt
      661 cgggcaattt atcccatacg ccgttccaat cgattttgcc caaaatattg atgccggtaa
      721 tccgcgcgct ttgggcattg aggtaagccg ggtcgccttt gactccttct ttgccgtctt
      781 taatttgcac ttcataaccc cggacaatca aatcgcggta ggcattgtcg aaccaacttg
      841 cctccaagtt gccgaaatcg cctttaaaca cgatgccggc ttctttgttg aacgattttt
      901 ccggatcgat tttgacggct tttattttat cgcccgaccg ccagccgtac atttccgcaa
      961 acgagggcag gcggaagccg gttgaggtgc ggtaagtcaa atccagccag tcggcaggtt
     1021 tgaggacgat gccggcgttc caggacaggg tgcggtgcgt gccggtggaa acgctgccgt
     1081 cgtccgaatg cgtgctgcgg tagtcgtagc gcaagcccgc gccgacatcc gcccacctgc
     1141 ccaaacggac attgtcccgg actgccgcgt aatagctttt gccgttgatg ctgcgcggcg
     1201 tgcagtccgt ataagtattg ttgccaaaga ggcagatttg ccccgtaacc acattccccc
     1261 tgcctatgct gacccaatag ggattgtcct tgccgccgtt ggggttggcg ttggggctgt
     1321 ttttgccgtt ttgagggggc gttttcggcg aataggcgcg gttggcactt tgataataat
     1381 aatcctgatg gcggaggtcg gaaccaaaac ggtcgtaacc gaggttgacg ctcaggttgt
     1441 ggcggatttt ggcggtatcg aaggattttt tgaatgccgc ctgcaagagc ctgtggcttt
     1501 ccccgtaaat cacgcggtcg gatttgtaat aggaaaacgg cttgtcggca ctcggacggc
     1561 aatatttgtc cgaaccgtcg gcagaacagt gtgtctgctg aaaatggttg tccaaaccga
     1621 tgccctgacg gtcgtaagag aggcgggcat aatccgccca agtgtcttta tcggcattgg
     1681 tatagacata ttccaaaccg tagcggcttt tggtgtgcgt ctcgtcgtaa aacacgcccg
     1741 taccgtattc cgcgcccacc ggcgcattgt tttcgccgct ggtaaacagt ccgccgtatt
     1801 tgtggttgcc cgcgtatttg ccgttgccgc gcaaagaacc cgcctgtttt gaatttgcat
     1861 caaaaaccgc cttggtcagg aatgccggaa ccgtcatatc gcgcgtgtcg aaagtttgtt
     1921 gcgtgcgttc gagtatgccg ccgatgtagt gccgtttgtt ttcaaaacga aaacccgggc
     1981 ggaacagcca cgaccggctt tcgtatgaaa gcggatcggc gaggaagcgg ttggggcccg
     2041 tgtagtctcg ggtggaaacc gtttgacgtt cgtctttgcc ggcaacatct tttttcggct
     2101 tcgctttaca cgtttcgtaa tccctgtttt tgcattcttc ttcaacgatg aaataggccc
     2161 atgtgctcgc gtcatcaacc ggcgccagcc tgttgaagct ctgaacgccg cgtccggcgg
     2221 cttcgtgggc gcggatttcc cccgcgtgcc gcccggtgcg gatcagcaaa gcctccgcac
     2281 cgcctatgcg ccccgccagc gcgatggatt gggtaagccc ccggtttttg ccggaatagg
     2341 cggttttact ctgaatgccc cactgcctgc cttccccgat aacatcgtcg gcggttttgg
     2401 tttgaaatgc gaccgagccc gccaatgcgc cgctgccttg ttcgaccgag tttgagcctt
     2461 tgctgatttc gacagcctta acgttttcat actcgatttc attgattgcg ccgctgctgc
     2521 ccgccgtcct cgtcccgccc aatgccgcct gcgcggtgta ggactgtatt tgcgccaagc
     2581 cgtccaccgt caaggcgacg cggtttttgt ccataccgcg tatcgagtag cccgagcttg
     2641 cgccgcgccc ctgttcgacg acggcgatgc cggggtcgta acgcgtcagg tcgcggatgt
     2701 cgagtacctg ttctttgctg agggtgtcgg cggttttaac caatttgccc aaaccggtta
     2761 cttcgttatc gcggcgggtt ttctgttttt tggcttttac ctgtatggta tccaactgtt
     2821 tttcctgtgc ttgtccggct tgcacatttt ctgcataagc gggcagcgca gtcattaaag
     2881 acaggcataa aatatttaat cggaacaaat gttgctgttg catagtgttt ccctaatctt
     2941 cgctttcaga cggaatcggc aggaacgatg ccgtctgaag ccttattctc gattgttcgg
     3001 cagccgtgct tattgcacaa gcttttggcg tttcgcaccg aataccacgg tcgcgctgcc
     3061 tgctgaattt ccattgccgg gtgaagtttg cgcatttttc gcttgcccat tgcccggata
     3121 ggcaaaccat ccgcccattt cttcggcttc gggcccgtaa aaaccgcccc gcacttcggc
     3181 atttgcgatg tgcactttat gtgtaccggt gctgctgttt tgatccggcg caaagccgcc
     3241 attaccggtt ttcgccgtac ctttaaagcc gttgccctca atcatggcat caatggtaaa
     3301 ggttgcctcc tgcctgtttg cagcggttaa cgttccgtta atttttttcg catcgaaatt
     3361 cacggtaaat tccgccctgt tgccacccgt ttcattggaa gcattgccgc tccagcttgt
     3421 gccgttggca atatgcccgt accaagtgcc tagataaacg acattttgtt cttttggaat
     3481 ttctttttca tcggtgcgct cgccttggag gaacatactt tgtgcaccct gtgccgttcg
     3541 ggcggcggct tggctactgc tttcgcctgc ctgcatcgcg gattcgctgt ttttacgcgt
     3601 caacattccg tatttcagat aattgaggtt ggaacagcag gcttcgactt cataggtttt
     3661 tgttcccgcc tgcccgccgt taacgcccgc cgcacccgaa gcggtttgca tgccgcccgc
     3721 gcctgtttgg gctttggtgt cttttttatc actttccggc gtgtaggttg ttttgtaggt
     3781 aaagtctgtt ccaccgtttt tacctttatc tgcctgaccg ttcccgcttt cggtgggcag
     3841 gagcggaatc ataatgccgt cgacaaccag ttgggcggcg ttgctgaagt tgtcgagatc
     3901 tttgatttcc ttgtctttta gtgtcaattc aaccgcatcc aaaaccgtgg tcagcttacc
     3961 gttttcagac gacgtgcctg tcgcaccgtt tgatgcggaa acgcttgcac cgcccaaagc
     4021 accgttaccg gccccatttt cggctttgtc tccggttttc gcgctgccga caacggcaac
     4081 ttttccatcg tcgctcaaaa agcggaaacc caattcctca ccattcggac cgaaaaagcc
     4141 gccgctcaga gaagacgagt cggaaacaaa gggatgttgt ttgttttcgc ctttttcggt
     4201 tgccatcgcc ttgccgctga agcggttgcc tgttatttgg gcatcaaggc tgtagtattg
     4261 ggtggtgtat ttatcgttag gagtagtgtt tgtaactcta ttattgcgta tcagtttgcc
     4321 cgtcaatttt ttattattga aatccacttt taaatttgag gtaaaaccat aaccctcttg
     4381 accatctttc ggcatggatt ggtctttatt agaatattgt tcatcatcat cgcccgaaaa
     4441 tccgctgtac ttatctcctt gtccttttga ggttccaaga atatcgttaa atttttgtcc
     4501 ctttttagta tcggttacaa aatgccatac gcctttgtag ataacttttt cagaagcggg
     4561 aagttgtcgg gaaggttttt taccgtgata aaagatatag ccgtcgttgc cagattttgc
     4621 actgtttgac ccgttttctc ttttgatttc gcttttcgcg tgtttgtaaa accagccgga
     4681 ataaacatat ttaaaatctt tataacctgt tacttcgttt tttggttggt ttgcaccgcc
     4741 attagtgctg ccgttttgat ggtttgattg catgagataa ggggaagaat gaatattatt
     4801 gctgccatcg tctgttttta ctccatcaat aaccgatttc tgtcgcttag gtaagttttt
     4861 gggatcgtca ggtaatcccg tctcctccca atcactctct ttcagtttaa cctcgtcttc
     4921 ttttccccgc ggcatccaga accgccgctt gaagcgcatt gcaaaaccgt atccgccttg
     4981 gtcttttcgg gcttccggtt ttttggaagg aacatcttga tactttggcg cgggacgcgg
     5041 ggcttcggta tcgacagaat caagatcgaa actgccgcct ccgcccagac aagcgctcaa
     5101 caaaaacacg ggcagcacca tagcagcctg attcaccaat ggattgttca taacaaaccc
     5161 gattcaatta aagaatgata aggattatta ttttatttat ttttaaaaaa tttgcaaatg
     5221 cttttttata tttttagtaa ataaaccaaa ataccgtcat tcccgcgctg cttttaaaac
     5281 cgcctgcaac cgccaaacct gctgcaatcc gctccctccc ctgcgcgggg gagggctggg
     5341 gagagggcac tttccaagtt gcggcaacct ctcccaaatc ccttagtctt ctaaaacaca
     5401 agccttgcgg cttgttgccc tctctccagc cctctcccac gggagagagg acggggaggc
     5461 tgttggggtt aagggttttg taaactaatc aggttgtgca ggctgctttt tatttttcag
     5521 acgacctgaa acaacagctg caaatctaag ttgcctttca aatcgcctgc aaccgaaaaa
     5581 tctgccgaaa cccactccct cccccgtggg ggagggctgg ggagagggca ttctccgagt
     5641 tgcggcaatc tttcccaaac tcccttagtc ttctaaaata caaaccttgc ggcttgttgc
     5701 cctctctcta actctctccc acggggagag aggacggggt ggctgttggg gttaaggttt
     5761 atgcaaacta atacggcttg tgcaggctgt tttttatttt tcatacgacc tgaaatcaac
     5821 ggtaaatcca agttgctttt caaaccgcct gcaaccgcaa aacctgccgc aatccgctcc
     5881 ctcccccgtg ggggagggcc ggggagaggg cattctccga gttgcggcaa tctttcccaa
     5941 actcccttag tcttctaaaa tacaaacctt gcggcttgtt gccctctctc taactctctc
     6001 ccgcagggag agaggacggt gcggctgttg gggttaaggt ttatgcaaac taatacggct
     6061 tgtgcaggct gttttttatt tttcatacga cctgaaatca acggtaaatc caagttgctt
     6121 ttcaaaccgc ctgcaaccgc aaaacctgcc gcaatccgct ccctcccctg tgggggaggg
     6181 ccggggagag ggcattctcc gagttgcggc aatctttccc aaactccctt agtcttctaa
     6241 aatacaaacc ttgcggcttg ttgccctctc tctaactctc tcccgcaggg agagaggacg
     6301 gggtggctgt tggggttaag gtttatgcaa actaatacgg cttgctgccc tctctctaac
     6361 tctctcccac ggggagagag gactatgatg cccaccggcg gcttgctatt aggaatatct
     6421 gaatcgtcat tcccacgaaa gtgggaatct agaacgtcaa atctcaagaa accgttttat
     6481 ccgataagtt tctgttccga caggtccgga ttcccgcctg cgcgggaatg acgaatccat
     6541 ccatacggaa acctgcatcc cgtcattccc acgaacctac attccgtcat tcccgcgaaa
     6601 gtgggaatct agttttttga gtttcagtca ttcccgataa attgccttag cattgaaggt
     6661 ccggattccc gcctgcgcgg gaatgacggg atttgaggtt tctgttttta attttctgtt
     6721 ttcacgggaa tgacggttta aaagttaccc gaaacctcaa aaaaaaaaag ctgtgtttta
     6781 atatagtgtt gatagacgta cttggcctcc atgtattcaa tcgtggaaat ctatatcttc
     6841 gtcctcgccg aaatagtcta tgcccgatat acaattttga tacacaaact tggaaatatg
     6901 ggtatcgtcg ccggagcgat agaatgcgga cagttatata tatacggttt ttttagggga
     6961 gcgggcagat gaagggcgga ttttgaatta accccatgca aattgacttt tgcgggcggt
     7021 tttaccgccc atatatttac aaaagccaaa tttttaaaca tatatccttg atatatacac
     7081 ggcgtaaaca tatactggaa acatctttaa attttccgaa attttaaaca tgagcaactg
     7141 gaaacccgat attccctata acgatttacc acccctgccg ccaaaacagg atattgaaag
     7201 caaaaccatc ctgaaacgtt gtatagccgc ccgtgcatcc cttgcccgtt taaagcaggc
     7261 ggcagaattg ataccgaatc aagccatgct gattaacacc cttcctgtta tggaagcccg
     7321 tgcaagttcg gaaattgaaa acatcgtaac caccacggac aagctgtttc aatccctgca
     7381 aatggatacg gaacggcaag accctgccac gaaagaagcc ctgcaatacc gcaccgccct
     7441 gtttgcaggc tatgaatcac tggcgagccg ccctttatgc acacaaaccg ccatcatggt
     7501 ctgcaacgcc atcaagcacc cctacgaaac ggccatccgc aaaacaggcg gcacagccct
     7561 aaaaggaggt aacagcggaa atgttgtcta taccccgccc gaaggagaag aaaccatacg
     7621 cggcaagctg gcaaattggg agcggtttat tcacgaaagc ggcgatttag acccgcttgt
     7681 catcatggcg gcggcacatt accaatttga agccatccac ccgtttacgg acggcaacgg
     7741 gcggacgggg cgcatattga acagcctgct attgattgaa aaagggcttt tggatttgcc
     7801 tattttgtat ttgagccgct acatcatcga aaacagggcg gactattacc gcctgctttt
     7861 aggcgtaacc gaacggcagg attgggaaag ctggataatc tacatcttag acggcgtagc
     7921 cgacaccgcc gattggacgg tatcgaaaat agatgcgata cgctgcctgt tcgagcagac
     7981 acgtcaacac atacggacac acgcacaagg aatctacacg cacgaactgg taaatcttct
     8041 gtttgagcag ccatatacac gcattgccaa cctagaagcg gcagggatag ccaaacggca
     8101 gacggcctct aagtacctga aagagctttc aggcataggt gtgctgcaag aaatcgccat
     8161 cggcagggac aaactattca ttcatccgcg cctaatggaa ctattgcggg gagagggcaa
     8221 cagctttact tcattctaac cccctcttca tccctacatg actaacacga aacagggatt
     8281 ttgacacccg aaccggtacc ccttgtattt tccccgcgaa aagccggcat ccgcccgcgc
     8341 atcatgggag caacaaaacc cctgcctaaa attttgactt gtgcaaatta ggggtatatt
     8401 tggggggtat attgaaaaat ggctaaaata aaatgtttaa taaacaaaat gttgaaactt
     8461 aatttcgata gagcctctgc atatcgtatt gaggcgttaa tggaatttga gaaagctatt
     8521 tttaaataag aaaaggtaac tattaaatag ctacctttct aaaattaaat atcaacacat
     8581 cgttaaaaca cagccaaaaa aaaccgaaac cgaacggtcc ggattcccgc ctgcgcggga
     8641 atgacggatt tcaagattac ggtattgtcg gggatgatgg gaaacggtgg gaattgtgta
     8701 aaaaatgccg tctgaagcct ttcaggcggc atttgcggca ttcggacatt taaaaatccc
     8761 gtcattcccg cgcaggaggg aatccgaata catccgcaca gaaacctgca tcccgtcatt
     8821 cccgcgaaag cgggaatcta gaacgtaaaa tctaaagaaa ccgttttatc cgacaagttt
     8881 ccgcaccgac aggtctagat tcccactttc gcgggaatga cgggatttta ggtctctgta
     8941 atctcgggca gctttccgtt atcgttttaa cccaaagaca ccatttcaat ctgctccatc
     9001 gtcctgccca gaaaacgctc gccgatggtt ctgaatttca aaggaatatc gctgacgtaa
     9061 aaacggtagt cgggattgtt gttgccggta tcgagcaatc cttcctgtgc aaggacgcgt
     9121 gcggtttctt cggccgtcgt aatcgcggaa tcgaccagcg cgacattgtg cgcctccctg
     9181 ccgattaagg gcttgagcaa gggaaagtgc gtgcagccca acaccagcgt atcgatgccg
     9241 tctgcaagca atggtttgag gtattcgcat acggtcaggc gggtaacttc gtgttccaac
     9301 caaccttcct ccaccaaagg gacgagcagc ggcgcggcct gcgtgcggac gagcgtgtcg
     9361 gggttgtccc tgtggatggc gcgcgcataa gcattgctgt tgactgtcgt attggtggcg
     9421 atgatgccga ttttattgtt gcgcgtcgtt gccagcgcgg ctttggcgcc ggcggaaatc
     9481 acgtccaaaa cgggcatatt gccggttttt tgacggattt tccgccccgc aaccgccgca
     9541 atcgtgttgc acgcgataac catcgccttg acatcgtgtc ccaataaaaa atcgacaatc
     9601 tgcatcgaga aattttcgat ggtcgcctta gatttcgtcc cgtaaggcac gcgcgccgtg
     9661 tcgccgaaat aaatgatgtt ctccatcggc agccgttcca tcagcgcgcg cacattggtc
     9721 aaaccgccga ttcccgagtc aaaaacgccg atgggccgct gcctgccgat attttccatc
     9781 ctttttccaa tccgtcctaa acatacaatc cgcatattgt acacgcgccg ctttttcttg
     9841 acagccatgc cgtctgaaag caggatgcgt atttggctgt tataatgtac ggcaatgccg
     9901 ccgccgggcg cacggttttc cgaccgcctg cccctccgat ccgccacata aaagttgtaa
     9961 agcccctatg tctgattttt cccccgttcc ccgattcctt gccgacgaag ccgccacact
    10021 cgatttgggc gcggcgtggt cttcccgttt aaacgcaccg ctggtcattt acctcgaagg
    10081 ggatttgggt gcgggcaaaa ccacgctgac gcgcggcatc ctgcgcggat tgggtcacca
    10141 gggcgcagtc aaaagcccga cctacgccat cgtcgaatct tatccgctgg aacgcttcgc
    10201 cctgcaccat ttcgacctct accgcttctc attccccgaa gaatgggaag acgcggggct
    10261 tgacgagctg tttgccgcaa acagcgtctg cctgatcgaa tggccgcaac agggaggcga
    10321 atttaccccg cctgccgaca tcaccgcaac attgacacac ggcggcggcg gcagaaaatg
    10381 cctgctgacc gcccataccg aacgaggaag cgaaagcctg ccgctatgac caaactgaca
    10441 cgaagacaaa tcatccgccg caccgccggc acactgttcg ccctaagccc catcgcatcc
    10501 gccgttgcca aaacggtacg cgccccgcag tttaccgccg cacggatatg gccgtcgcac
    10561 acctacaccc gcctgacgct ggaaagcacc gccgcgctca aataccagca cttcgcgctc
    10621 gacaacccgg gcaggttggt cgtcgatata caaaacgcaa acatcaatac cgtattgcac
    10681 gggctttccc aaaaagttat ggcggacgac ccctttatcc gcagcatacg cgcgggtcag
    10741 aacacgccga ccaccgtccg cctcgtcatc gacctgaaac agcccaccca cgcacaagtc
    10801 ttcgcgcttc cgcccgtcgg cggctttaag gaccgcctcg tcgtcgacct ctatccgcac
    10861 gggatggatg ccgacgatcc gatgatggcg ctgctcaacg gcagcctgaa caaaaccctg
    10921 cgcggctctc cggaagccga cctcgcccaa aacaccacgc cccgacccgg gcggggcaaa
    10981 aacgggcgca gacccgtcat catgctcgat ccgggacacg gcggtgaaga ccccggcgcc
    11041 gtcagcccgg gcggtttgca ggaaaaacac gtcgtcctct ccatcgcccg cgaaaccaaa
    11101 aaacaattgg aagccttggg ttacaacgtc tttatgacgc gcaacgaaga cgtgttcatc
    11161 ccattgggcg tgcgtgtcgc caaagggcgc gcacggcggg cggacgtatt cgtctccatc
    11221 cacgccgacg ctttcaccag cccctccgcg cgcggaacgg gggtttatat gctgaacacc
    11281 aaaggcgcga ccagctctgc cgccaaattc ttggaacaaa cccaaaataa tgccgacgcg
    11341 gtcggcggcg taccgaccag cggcaaccgc aacgtcgata ccgccctgct cgacatgacg
    11401 caaaccgcca cactgcgcga cagccgcaaa ctcggcaaac tggtgcttga agaattgggc
    11461 aggctcaacc atctgcacaa aggcagggtg gacgaagcca atttcgccgt tttgcgcgca
    11521 cccgatatgc cgtctatcct ggtcgaaacc gccttcctgt ccaatcctgc cgaagagaag
    11581 ctgctgggca gcgaatcctt ccgtcggcag tgcgcccaat ccattgcctc gggtgtccaa
    11641 cgctacatca atacatccgt attgaagcgg ggttgattga aaaggcggtg tttcaaaata
    11701 tagttgtcgg atgaaggcag gcataaacct acttccgccc caaaccgcgt ttttatgatg
    11761 aaaggtatgg ataaattgag ataccaacgg gattttttaa atatccgccc catttttaca
    11821 gccggcgaac aagaatacct gaccgaattg tccgatcggc ttcctttatc tgttttaacg
    11881 gactccgtgc gtaatattga agaaatcggt atcgattttg tgtacagttc tgccaaattg
    11941 gaaggaaaca cttataatca atacgatacg caggcattgc ttaaactcgg gcaaaccgca
    12001 ggcgggaagt tatattcgga tgccgtaatg ttaatcaacc tgagggaaag ttaccggcac
    12061 ctgctgtccg gtttggacag ccccaagccg tttgactggt tggatttctt aaaaaccacc
    12121 cacagcctga tttcggaaaa cttactggaa aaaggctccg gcggcgtagt ccgccgcgac
    12181 agcgttacta taagcgggac agactacacc cctttatcca acccgcaaag tttggatacg
    12241 gaattgaaat ggttgcttca agaagccccc aaaatagaaa atcctttcga ccgcgccgtt
    12301 tatctccata ataatttggc gtatctccga tattttaagg actgcaataa acgtactgcc
    12361 agaaactgta tgaccttgtc gctgatgcgc tccggttttt ttccttgcgt attctccccc
    12421 gacagttatc ccgcctatgc cgaggctgtc gtagcctatt acgaaaccgg cgattacggt
    12481 ttattcaaga aatattttat ttcggcatac gaaaataccg taaataagta cggtccccag
    12541 cctgatgtgg atattttccg aaatttctcc atttaaaaag ccgtctgaac atttttcaga
    12601 cggctttttt gtacactttc ctcaacggtt cgatccctgc accatatcga tcaggaacag
    12661 gcggcagtcg aggttgccgt tataaagcgg gattttccgc ttgggcagca ggcgcatgaa
    12721 tttgggcatt tccctgtcgc cggtaaacat gccgacccgc cagccggcat agtgtttttt
    12781 caaccacgta cccaactgcg gataaagtgc ctgcaaagcg cggacttcct caaggcgcac
    12841 gccgtagggc ggattggaca ccatgatgcc gttttcgccg ttcggacgga cggactgcgc
    12901 gtcggcaacg ctgaaggaaa cgatgtcgtc cgctccggca ttgtgtgcgt tgtccaatgc
    12961 cgtctgaacg atgcggcggc cgttgtcgct gcctgcaatc ggggcgcgga cggggcgggt
    13021 ttgcgcttcg gcgcggcggc gcaaatccgc ccacagcgtt ttatcgaaat tttgcagttt
    13081 ttcaaaaccg aagcggcgca tcatacccgg cgcgcggccg gcggcaatcc aagcggcttc
    13141 gatagcaatc gtgccgctgc cgcaaaacgg gtcttgaaac ggctgcgtgc cgtcgtagcc
    13201 tgccgagagc agcagcccgg cggcaaggtt ttcgcgcagc ggggcttcgc cggtatccag
    13261 gcggtagccg cgtttgaaca gggcttcgcc cgaagtgtcg atgaagattt cgacattgcg
    13321 ttcgtccaaa aaggcgtgga tgcggacatc gggcgcggct ttgtccacgc tcggacgtgc
    13381 gtcgtaaatg tcgcggaaag cgtcgcagac ggcatctttg acggtcaggc cggcaaattg
    13441 gaggcttttg acgttggcgc gttttgcctc gattttgact ttgaacgtct gctgcaaggt
    13501 aaaccagttg aaccagttga tgtttttggc aagtttgtag atgtcgcgct cggttcggta
    13561 tgtgcctttg gtcaggcgca gcaggatgcg gccggcggta cgcgagtgca ggttggcggc
    13621 gtaggcctgt tccaatccgc cccggcagga aacgccgccg tcaaacgctt ggacatcggt
    13681 acagccgagg cttccgagtt cttgagataa aacggtttcc aagccgcgcg ggcaggtggc
    13741 gaaaagtgta tataaagtat tcatagcgtg tcctttccgg acggatgttc cggcaatggc
    13801 ggattgaaag gtttattcgg cggtaaatgc cgtctgaaat gtccggctgc cgattgtaat
    13861 gtccgccgta aaatcgcgcc tgccttcgac acagacgggc aggcggatgc gtgctgcctg
    13921 ccaagtcccc gacggttgcc gctcgaacat atagcggttg aaacccatat ccatattttt
    13981 catactgaag ctgatgctga cctgttccgt gccggcgggc gcgtgttcga tataaatatc
    14041 aaacggtttt ttggttgaaa cggcggcggc gcggacacgg cttccgtccg gcagcgtgca
    14101 accctcggtc aaatcgcatt gcgccgccac ggcttgcggc tgctgcgcct gccaccattg
    14161 caacaaaacg agcttgaagg cggcaaaggc agtcagcagc agtgcggcaa gcagtaattt
    14221 gcggttttta ttcatgattc ttccctattg tttcatccct taccaccgcg tgcgccccca
    14281 atccgagcca tagttttcca taacgtgcaa ccgtctgtcc gtttgctgca agtacgagcg
    14341 gcacggatac gccctgccgc agggcttctg ccgcctcttg tgcctgaaca tcatcgcaca
    14401 cgcgccacac ggccacatcc gcgccctttt cctgcgcctg ccgccattgt tcgcgggtct
    14461 gcaccatcat ccacacgctg ccggcgtgtt cggacctgtc ctgccattgt gccgcctcca
    14521 tcaaaacgtt cgcaccgctt ccccctgccg aacccaaagg caggacgcgg tacgcgccca
    14581 tactgttttc gccgtacaaa cctgttttca ggctgccgta caaacggcgc gggacggaca
    14641 gcgaacgcaa aagcgcaccg ttggcgggca gcatgggggc aacggtaaaa tcacccgcct
    14701 tctgccaaga ccattcctgc ccttcgcgcg attgcggtcc gccctcccat tgatcggggt
    14761 ttacccataa gaatttcagg cagacgcggg cgtgttcgta ggaatggatt ttggtcagcc
    14821 aaggcgtggc ggcgaggatg cggatgccga gttcttctcc aaactcgcgt tgcagggctt
    14881 ggaagtcggt ttcgcccgcc tcgaccttgc cgccggcaaa ttcccaatat ccggcatagg
    14941 gcttgccttc ggggcgcgag ccgagcaggt aattgccgtc tgaatcgagc aggatgccgg
    15001 caacgacgcg gataaggggg cgggtatctt ggatcatggc gggtatgcgg ttggtcggtc
    15061 ggaatgcaaa tgagggaagg gcaatgccgt caacgggttt gccgaatttc agacggcatt
    15121 atttttcggc aacggcaaac gccaacacgg tatcgccttc gtccgccata ctcaggctga
    15181 cgcggctgat gccttgttct tccagccatt cggacagggc ggggccgtag aaaaattcgg
    15241 gcttgcccaa tgcgtcgtgc ccgatgccga tgttgcggaa ggaaaccgcg cctcgtatgc
    15301 ccgtgccgac ggctttggcg aaggcttctt tggcggcaaa gcgtttggca aggtagttga
    15361 cgggtttgcc cgcctgcgga aattcaagca gctcttcggg agtgagtatg cgccctgcaa
    15421 acgcctgtcc gaattttttg tttaagcgga tgatgcgctt gagggaaacg atgtctgtac
    15481 cgatgccgta aatcatattt gcgctccttt ttcgtgaaat gccgtctgaa acggtttgcc
    15541 tgcccttacg gcagcagcct tgccctgaac atcgcctcct tcatctggcg cacggcctcg
    15601 ggcaatccga ggaaaagtgc ctgcgaaatc agcgaatgcc cgatgttcag ctcgcggatg
    15661 gcgaggattt gggcgacggg ggtaacgttg tgtatggtca gtccgtgtcc ggcgttgacg
    15721 accaagccca aatcgccggc gaaatgcgcg ccgttttgca gacgctcgaa ctgcctgatt
    15781 tgttcggcgt ggctgtgtgc gtcggcatat gcgccggtgt gcagctcgac aacgggcgcg
    15841 ccgacatcat aggcggcttg gatttgcctg tcgtcggcat cgataaacaa ggacacgcgt
    15901 atgcccgcgt cggtcaggat tttggcgaat tcggcgattt tttcctgttg cgccaatacg
    15961 tccaaaccgc cttcggtcgt gatttcctgc cgtttttcag gcacgatgca cacgtcttcc
    16021 ggcatcactt taagcgcgtt ttcgagcatt tcttccgtca acgccatttc aaggttcagg
    16081 cgcgtgcgga tggcgttttt gacggcaaat acatccgcgt ctttgatgtg gcggcggtct
    16141 tcgcgcaggt gcatggtaat caggtctgca ccgtgcgttt cggcaaccag tgccgcctcc
    16201 acggggctgg gataagtcgt gccgcgcgcg ttgcggacgg tggcgatgtg gtcgatgttg
    16261 acacccagaa gcataatgtt tccctttctc ttcgttttcc tgtttgacgg catggtgcgg
    16321 gcgcagctac gcggtattgc ggtcgaactg ccttatctgt tccaacacct gccgcgattt
    16381 caagccttcg ggaagcagcg tgccgattag cagccgtgtg attttcaatg cctgttgcag
    16441 gctttcggcg gtgcggaaac tgccttcgcg caaatcgatc aggctctgcc cttcgacaat
    16501 tgcgccggct tcgtgcgaaa gcgcgcctgt gtcccggcat acgggcatga ccgcctcttc
    16561 gggcatcagc cggtaggttt tgtccgccaa aatatcgccg cccgtgccgt cggcgtgcaa
    16621 atcgggggca acgcccaagg cattgagcag cttccattcg aagcggcgca aatcggcaat
    16681 atggttggct tcacggcaca ctgcctccat cacttttgcc aacgcgtcgt acagttcgga
    16741 catcgggtct tcgcgcgcgg tcagtttcaa caccagctcg ttcacataca gaccgctgaa
    16801 caacgccctg ccctgcggct gccgccatcc gcccatccat tcggcgcggt gcagggtttt
    16861 gagttcctga ctgccgtacc acgacacgct ggcagggacg aacggaacca atacgccgcg
    16921 cagctcgctc tgccgtttgc gcgcgctgcg cgccagcaaa gccacacgcc cgtaacggcg
    16981 gctgaatgct tcaacccgca ggctgctttc gcgccaaggc gaagatgcca gcataaaaac
    17041 gggttcgtgg ttgactcggt gttcggacat aatgcctgaa atgccgtctg aacgctgccg
    17101 cgactacaaa acggcagtcg gatacgaacc gatggctttg acaaacgaag cgcgttcgcc
    17161 caagcgttcc aatgccgtct gaatctgcgc gtcccggcgg tgtccttcga tgtcgatgaa
    17221 gaacaggtat tcccacaaaa cggatttgct cggacggctc tcaaacttgg tcatggaaat
    17281 acccgattcg gtcagcggtt gcagcagcga ggcaaccgcg ccggcgcggt tgggcgcgga
    17341 aacggccagc gaggttttgt cgctgccgct tgcaccggtt tcgtgatgtc ccatgaccag
    17401 aaagcgcgtg gtgttgttcg gttcgtcttc gatgcactcg gcaaccatat cgagtccgta
    17461 aatttccgcc gccgtgcgtc cggcgatggc ggcaaccgta ccgtcgtccg attcggcaac
    17521 cagccttgcg gcttcggcat tgctggacac ggcaatccgt tcggcgttgg gcagacgcct
    17581 gcccaaccag tcgttgcact gcgccaacgc ctgcgcgtgc gaaaatactt tggcgatacc
    17641 ctcggtgctg ccgttgtttt tgcgcaacag gttgtggtgg atgcgcaaaa cgacttcgcc
    17701 gcacgcctgc aacgcggtaa cggcaagcaa atccaatgtg cgcccgaccg agccttcggt
    17761 cgagttttcc acgggcgcga ccagataatc cgcctgacgg gtttcgacct gcttgaagca
    17821 gtcgtctatg gtcggacacg ccattgtatg cgcggcgtgt ccgaaatgct tgattgccgc
    17881 ctgttgggta aacgtgccct gcggccccag ataggcgatg gtcagcggac gttcgacggc
    17941 gaggcactcg ctcatcactt cccgaaacag gcgtgctacc gattcgtcgg gcagcgggcc
    18001 tttgttcaaa tcctgaatgc ggcgcaacac ggcaacctcg cgttcggggc ggtacaccgc
    18061 gcccgtgcct ttcagctcgc cgatggcgtg tgcgtgttgc gcgcgttcgt tgagcaggcg
    18121 cagaatttcg gcatcgatgg tgtcgatggc gttgcggtgc gggatgagga gttcgtcgat
    18181 agtttgggac ataatttcgc ctgaacggta atttgccgtg cattctaaca tcaaatgccg
    18241 tctgaagcgg tttcggacgg cattttccgt taaaggtatt cgctttgccc gttttctttc
    18301 cacgcacgat gcgagcagag ccacaaaagc gcaatgccgc aagaggcgga cgcggtcatg
    18361 gttgccgcca tcacggttgc cgccatgacc acgcccgcgc cgattaagga ccggaataca
    18421 cccgacacgg cgttcgcgct gccgccctct tctttgaaat aagacataaa gcatgcctgc
    18481 gtgtccgcac cgaccaggcc ctgcgtaccg acggaaaaca tcacgcacgc aaccggcagc
    18541 caaaacgggg gcaacccgaa aaacagcacg gcggcgagtt gggacgggtt ggcggcaaat
    18601 tggacgacaa tcccccgcag caggatgctt tgcggatgcg cgccggtttt aagccgccac
    18661 gcggtaacgc ggctgaaaaa catcatcgtg atgatgttga gtgcaaacac ccatgcgtac
    18721 cggtgcggcg taacgtggta gagctgccgg tacacgaagg aagattcggt cagaaaggcg
    18781 aacatcgaac cgaagctgaa tgcctgaaaa aacagataac ccatcgcggc acgggttttc
    18841 aatacgcgct tgaaccgccc cgccaccagc ccgaacacat ccctgccgat tttgccgccg
    18901 acggcgggat tgggcaggaa atactgtacc aaaccgggca gcaccggcga atacgccgcc
    18961 aagaaaacga aaatcgcccg ccatccgccc aatccctgca acaatgcgcc gaccatgggt
    19021 gcggccagcg gcacaaccat cagaatgatg ccgataaggg caaacatctg cgcggctttg
    19081 cgtccggaat aataatcgcg caccatcgca ccgacgatga ctacagccat gcctgcgccg
    19141 aacgcctgta ccgcacgcag gttaaggagc tgttcggtac tcgaagcaaa tacgatggcg
    19201 gcaacggcaa ggcaatatac aatcaaaccg gtcagggcga cgggtttgcg ccctttgatg
    19261 tcggacaccg cgccgccggc cacttgcccg aacgccgtgc cgaacataaa caaactcaga
    19321 ctctattcga tacggtggat atccgcgttc agcggctgcg ccatttcggg aatcgcgggc
    19381 aggtaggcat cggtggaaaa cggcatcagc gcgaccagta ccgccatcaa aaccgccatc
    19441 agttttccgc tcatcggagg aagggtcgga gacatggttt ttccgttcaa atcaaataaa
    19501 gaaaccgtcg caaacgacgg tcggcacggg cgcaagttta acatatcgga cggcggggca
    19561 aaaccgaagg atatgccgcc cgaaaccgct tcagacggca ttgccgtttt gcgcgtccct
    19621 gcgcgacagc cggccggcgg cgaaagtggc ggcgatgacg acaaacacgc ccaaggcgga
    19681 cacgggcgat aaatgttcgc ccaaaatcaa aaccgccaac agcacgccga cgacgggttc
    19741 gagcgaaatc aacagtcccg acgcgttggc aggaacacgg ctcatcccct tgttccacag
    19801 ccaataggcg taccagccgc accccaaacc caaatacaac agcgacaata ccatcccgac
    19861 gctccagtcc acggtataac tttgcgccaa agcaagcgaa aacggcaggc acatcaacga
    19921 tgcggcggca atggaaacag atgtgaatgc cggtgcgccg atgcgggcaa tcagcctttg
    19981 cgtcggacgc atagcggcac aaaagcccgc gcccgccaac aacaccagca ggcagccgaa
    20041 ccagccgact tcgccgccct cttccgcacc gcccgccatc agcagcgcga caccggcaaa
    20101 tgccgccgcg ccgcatatcc agtggtaggc acgcgctttg tcgttgaaga aaaagtgtcc
    20161 gacaaacacc atcagcagcg gctcgagtcc gacaatgacc gatgcgctgg cggcggaagt
    20221 gtatttcaac ccgacaaact gaagcagcag ggtcagcaca tagttgacga acgacacaat
    20281 cagcaacggc ttccattcct cacgcggaat cttgccgaca tgacggcggc aggcgggcag
    20341 tgcaggcagc gcggcaatca gcaggcgcac gccgaccatc aatgcgggat cgatgccgcc
    20401 ataaacatat ttggcggcaa taaacgagct gctccagata atcagggcaa ggatttggta
    20461 aaacatagtg agtggtaaag tcagatggtc atacaaaagt atagcggatt aacaaaaatc
    20521 aggacaagaa ggaatgcccg aaccgtcatt cccgccactt ttcgtcattc ccgcgaaagc
    20581 gggaatctgg aatctcggac tttcagataa tctttgaata ttgccgttgt tccaaggtcc
    20641 ggattcccgc ccgcgcgcaa gtttccgaag ccatcctttt ggccgaaggt caaaaatcag
    20701 ccgttaccga gtattacctg aataacggca aatggccgga aaacaacgac gaggccggcg
    20761 tggcatcttc ttcatcaatc aaaggcaaat atgttaagga agttaaagtc gaaaacggcg
    20821 tcgtcaccgc cacaatgaat tcaagcggcg taaacaaaga aatcaaaggc aaaaaactct
    20881 ccctgtgggc caagcgtcaa aacggttcgg taaaatggtt ctgcggacag ccggttacgc
    20941 gcgacgccgg cgccgacgac gccgtcaaag acgtcaccgg caacgacaaa atcgaaacca
    21001 agcacctgcc gtcaacctgc cgcgataaac actctg
//
LOCUS       DAXFZM010000030        20339 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.030, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000030 DAXFZM010000000
VERSION     DAXFZM010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 20339)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20339)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20339
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.030"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            40..686
                     /locus_tag="ACFJAG_000938"
                     /pseudo
     CDS             40..686
                     /locus_tag="ACFJAG_000938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750392.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
     gene            complement(758..2503)
                     /gene="recD"
                     /locus_tag="ACFJAG_000939"
     CDS             complement(758..2503)
                     /gene="recD"
                     /locus_tag="ACFJAG_000939"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009338 - exodeoxyribonuclease V complex
                     [Evidence IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0008854 - exodeoxyribonuclease V activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit alpha"
                     /protein_id="HFC3980263.1"
                     /translation="MELQTDEFAQAAARAAIRFLERYAGSGNEVLANCTERLFQALQN
                     GHSFIRLSGDEADALSALAPVVGTSAAPLILEGRRLFLGRMWQLEYDLAAEIKRLAAA
                     GTSAPDAAGARQNLAKWFQGAGSEGQRDAAALALLQFFMVITGGPGTGKTTTVAKLLA
                     LICGENENLPHIALAAPTGKAAAHMARALHRSINGFDAPEAVRRHLLKLEGQTVHRLL
                     KLSPPKMQAAFDHIRPLPFDVLIVDEASMLDTALMLQLLKAVKTGARVILLGDENQLP
                     SVGIGAVLSVLSQKTVLDGETHQRLAGFLPEHGFSVSANPPVLAQNTAHLSFSHRFGD
                     NSGIGCLARAAVSGDEGAWALFDRFPDELEHSECSPNARVERLYRAHKAYWQAVKDGN
                     IEAAYAGISDIVVLAAWRQDAEDFNEAYCSYVRRKMNIPEHLAYFAGEPIMIRQNDYA
                     LELFNGDIGLIMEDVGRQGSLAAYFADADGFKKVAVSCLPEFEPAFAMTVHKSQGSEY
                     REVWLLPPSDAPSDEGDDALSGLSKELLYTAITRAREKFVFFGGKKTFCQAVNTVKVR
                     QTALDSMLERVFSQE"
     gene            complement(2570..3265)
                     /gene="lolD"
                     /locus_tag="ACFJAG_000940"
     CDS             complement(2570..3265)
                     /gene="lolD"
                     /locus_tag="ACFJAG_000940"
                     /EC_number="7.6.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter
                     ATP-binding protein LolD"
                     /protein_id="HFC3980264.1"
                     /translation="MSDLILKCEGVGKRYRDGGLDVPVLYGLDLEIRTGESTGIIGSS
                     GSGKSTLLHILGGLDMPSEGRVLLMGEDLRALNQRRLGDLRNRHLGFVYQFHHLLPEF
                     SALENVMMPLLIGKKSRKEAVETAMAMLDKVGLKHRSTHRAGELSGGERQRAAIARAL
                     VTQPKCLLADEPTGNLDRANARNVLDMMLELKTELGTGLVVVTHDDELAGRFERVMVM
                     KDGSLHPRQGANA"
     gene            complement(3258..4505)
                     /locus_tag="ACFJAG_000941"
     CDS             complement(3258..4505)
                     /locus_tag="ACFJAG_000941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit"
                     /protein_id="HFC3980265.1"
                     /translation="MFSLEAWIGLRYLRAKKRNGFMSFITMVSIAGIALGVTALIVVL
                     SVMNGFQKEIRGQLLNVAPHAEIGYIDNTDTDWRNLLRFAENRKGILAAAPYVSNQAL
                     LANAGEIRGVQIRGILPSEERKVVEYGDKMPAGKFEDLIPGEFDIILGVGLAEALGAE
                     VGGKVTVITPEGNVTPAGVVPRLKQFTVVGLVKTGVYEVDNSLAMTHIQDARVLYRLD
                     KEVAGLRLKLADPQNAPALTATLIPEAQRDTVWVRDWTYSNRSYFEAVELEKRMMFII
                     LTLIIAVAAFNLVSSLVMAVTEKQADIAILRTLGLSPAGVMKIFMVQGAFSGFFGTLA
                     GVVCGVLWGWNVGRVVAFFENLLGVHLINSQVYFIDYLPSDVDMGDVALIACISLGLS
                     FVATLYPSWRASKTQPAEALRYE"
     gene            4731..5009
                     /locus_tag="ACFJAG_000942"
     CDS             4731..5009
                     /locus_tag="ACFJAG_000942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980266.1"
                     /translation="MNIRKISALCAVAVFTVSTAYAKEIKIDANNTPYSEADAQKLAA
                     TAVGMGVKEPVSLNGGSGSITVSGSSAAQCVFTVGSGGTLQIQGLNCK"
     gene            complement(5065..5682)
                     /gene="recR"
                     /locus_tag="ACFJAG_000943"
     CDS             complement(5065..5682)
                     /gene="recR"
                     /locus_tag="ACFJAG_000943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombination mediator RecR"
                     /protein_id="HFC3980267.1"
                     /translation="MNSKKQDAFQRLIGALKVLPNVGPKSAQRMAYHLLQQKRKEAEE
                     LVDALQTALRQVRHCARCNTFCEGGLCDICADETRDGRRLMVVHMPADVSNIEAANCH
                     DGLYFVLMGQINTALGMDVSAIALDRLAQRLDGGEIEEIIIATAFTAEGNATAYVLSE
                     FFKNLPYKVSRLSQGIPLGGELEYVDAGTLAQAVYERRLIKEGGA"
     gene            complement(5749..7287)
                     /locus_tag="ACFJAG_000944"
     CDS             complement(5749..7287)
                     /locus_tag="ACFJAG_000944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SurA N-terminal domain-containing protein"
                     /protein_id="HFC3980268.1"
                     /translation="MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGD
                     EKISEHSINNAMQNEQADGGSPWRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQMIV
                     DDPNFHDANGKFSHALLSQYLSQRHMSEDQFVEEIRDQFALQNLVSLVQNGVLVGDAQ
                     AEQLIRLTQVNRTIRSHTFNPDEFIAQVKASEADLQKFYNANKKDYLLPQAVKLEYVA
                     LNLKDFADKQTVSETEVKNAFEERVARLPAHEAKPSFEQEKAAVENELKMKKAVADFN
                     KAKEKLGDDAFNHPSSLAEAAKNSGLKVETQETWLSRQDAQMSGMPENLINAVFSDDV
                     LKKKHNSEVLTINSETAWVVRAKEVREEKNLLFEEAKDAVRQAYIRTEAAKLAENKAK
                     EVLTQLNGGKAVDVKWSEVSVLGAQQARQSMPPEAYAELLKAKPANGKPAYVRLTGLP
                     APVIVEVQAVTPPEDIAAQLPPAKQALAQQQSANTFDLLIRYFNGKIKQTKGAQSVDN
                     GDGQ"
     gene            complement(7336..7710)
                     /locus_tag="ACFJAG_000945"
     CDS             complement(7336..7710)
                     /locus_tag="ACFJAG_000945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase"
                     /protein_id="HFC3980269.1"
                     /translation="MIILHGIPNCDTVKKAKNRLAGYGLEFGFRDFKKQMPSEAEICS
                     WLEQVPLATLFNKRGTSWRKLDAETQQKALSSTAEAVKLMSEMPSLIKRPVLECGSRV
                     YVGFSEETYDGIFNRQAPCRQG"
     gene            7860..9488
                     /locus_tag="ACFJAG_000946"
     CDS             7860..9488
                     /locus_tag="ACFJAG_000946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATPase"
                     /protein_id="HFC3980270.1"
                     /translation="MISTNGITMQFGAKPLFENVSVKFGEGNRYGLIGANGSGKSTFM
                     KILGGDLEQTAGEVAIENGVRLGKLRQDQFAYEDMRVLDVVMMGHTEMWAAMTERDAI
                     YANPEATEDDYMKAAELEAKFAEYDGYTAEARAAELLSGVGISEDLHNAKMAEVAPGF
                     KLRVLLAQALFSKPDVLLLDEPTNNLDINTIRWLEGVLNQYDSTMIIISHDRHFLNEV
                     CTHMADLDYNTITIYPGNYDDYMLASAQSRERALKDNAKAKEKLQELQEFVARFSANK
                     SKARQATSRLKQADKIKSEMVEVKPSTRQNPYIRFEADEKAKLHRQAVEVEKLAKRFE
                     TQLFRNLNFILEAGQRLAIIGPNGAGKSTLLKLLAGAYNPEYSDGLLPDEGSIKWAEK
                     ASVGYYPQDHENDFDVDMDLSEWMRQWGREGDDEQVIRGTLGRLLFGSNDVVKKVKVL
                     SGGEKGRMLYGKLLLLKPNVLVMDEPTNHMDMESIESLNMALDKYNGTLIFVSHDRQF
                     VSSLATQIIELDGKGGYEHYLGDYESYLEKKGVA"
     gene            9567..10799
                     /locus_tag="ACFJAG_000947"
     CDS             9567..10799
                     /locus_tag="ACFJAG_000947"
                     /EC_number="2.7.7.72"
                     /EC_number="3.1.3.-"
                     /EC_number="3.1.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004810 - CCA tRNA nucleotidyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0001680 - tRNA 3'-terminal CCA addition
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional CCA addition/repair protein"
                     /protein_id="HFC3980271.1"
                     /translation="MQTYLVGGAVRDYLLGLPVKDRDWVVVGADAQTMLAQGFQPVGK
                     DFPVFLHPKTHEEYALARTERKTAKGYAGFSFHADKDVTLEQDLMRRDLTINAMAQDA
                     DGKIIDPFGGQRDLAAGILRHVSPAFAEDPVRILRAARFAARYGFEIAEETIKLMRQM
                     VENDEADALVAERVWQELAKGLMEKNPRKMIEMLRECGVLKVLLPEVDALFGVPQRAD
                     YHPEIDSGIHTLMTLQRAADMGLSLPERYAALLHDLGKAKTPPDILPRHHGHDINGVE
                     PVREVNQRLRAPRQCAELAELVCRWHIIFHQVGQLKSQTILNVLKKTDAFRRPERFQT
                     ALNVCIADTQGRLNREHTPYPQRAHWLALLEAANQADSGKIAAECRAQGKAHFIAKQI
                     DRARLAQIAPLQKAFRGA"
     gene            11218..11526
                     /locus_tag="ACFJAG_000948"
     CDS             11218..11526
                     /locus_tag="ACFJAG_000948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980272.1"
                     /translation="MTLKTDLLPKINNEDYQRLILKHSAEFSGGETRLLNEILEKFNF
                     DVVQAQALAQAVMQQVRFDPNAYHIDSDDEDTTGICPHCINPPMPPLRDYLVWRETRG
                     "
     gene            11608..12639
                     /gene="ruvB"
                     /locus_tag="ACFJAG_000949"
     CDS             11608..12639
                     /gene="ruvB"
                     /locus_tag="ACFJAG_000949"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HFC3980273.1"
                     /translation="MLQTDNLTAAQPQRIVAAQTASAQEELLERALRPKTLDDYIGQH
                     KAKEQLAIFIQAAKKRGEALDHVLLFGPPGLGKTTLAHIIAKELGVNLRQTSGPVLER
                     AGDLAALLTNLDPHDVLFIDEIHRLSPVVEEILYPALEDYRLDIMIGEGPAARSVKID
                     LPPFTLVGATTRAGMLTNPLRDRFGIVSRLEFYENRDLTTIVSRSAQLLQLDMGEEGA
                     MEVAKRSRGTPRIANRLLRRVRDFADVKNNGVIDAAVADAALSMLDVDAQGLDVMDRK
                     FLEAVLHKFGGGPVGLDNVAAAIGESTDTIEDVIEPYLIQQGFLQRTPRGRMATERAY
                     LHFGLPVEK"
     gene            complement(12884..13567)
                     /gene="rpe"
                     /locus_tag="ACFJAG_000950"
     CDS             complement(12884..13567)
                     /gene="rpe"
                     /locus_tag="ACFJAG_000950"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004750 - D-ribulose-phosphate 3-epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HFC3980274.1"
                     /translation="MTAYRIAPSILSADFARLGEEVANVIAAGADLIHFDVMDNHYVP
                     NLTFGPMVCAALKPYASVPIDVHLMVEPVDDLIQSFAKAGASIITFHPEASRHIDRSL
                     SLIRDMGCQAGLVLNPATPVYVLENVLDRLDMVLLMSVNPGFGGQSFIPHTLEKIRQV
                     RAMLDRYEGKSGRRIAIEVDGGIKTDNIAAVARAGADTFVAGSAIFGKPDYKAVIAAM
                     RAELEKAAG"
     gene            13713..14147
                     /locus_tag="ACFJAG_000951"
     CDS             13713..14147
                     /locus_tag="ACFJAG_000951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Spy/CpxP family protein refolding chaperone"
                     /protein_id="HFC3980275.1"
                     /translation="MPLPAPCRFAKPAASFLSMALLSCQLSHAATAYIPPNDFQPNCD
                     IRRLGLTQGQHNELRKIRAAFKMAGDRARLKVMHSEHSRRRSVVEIISSDVFNRNEAR
                     DYVESRYHSSMDFAVDELEIQHRFFHILTPQQQQMWLSSCLK"
     gene            complement(14160..15023)
                     /locus_tag="ACFJAG_000952"
     CDS             complement(14160..15023)
                     /locus_tag="ACFJAG_000952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HFC3980276.1"
                     /translation="MELNEFLDKAYAVLRRLDAVLPPEPGHTDWNALAFRWQSAGKKG
                     FLEHLPDPHVFPLSRLAGVGRQTELLVRNTEQFIAGRPANNVLMSGARGTGKSSLVKA
                     LLHEYADKGLRLIEVDKSDLIGLPYLLALLKERPEKFIVFCDDLSFESGDETYKALKT
                     ALDGGLSQRCANVMVYATSNRRHLMPEYLDENAGTTGVRGEIHQKEAVEEKVSLSDRF
                     GLWLSFYPFDQNDYLAAVRSWLEDFDVPYDEAARTAALQWAQMRGNRSGRSAWQFACD
                     WAGRLPEQRAP"
     gene            complement(15031..15648)
                     /locus_tag="ACFJAG_000953"
     CDS             complement(15031..15648)
                     /locus_tag="ACFJAG_000953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HFC3980277.1"
                     /translation="MFTGIVQGLGKLTAIHRPSEAFQTYVVELPQEAAENLQHGASVA
                     NNGCCLTITEIEGNRVSFDLMAETLAKTNLGLLKEGDCVNIERAARFGDEIGGHVMSG
                     HIMATVPIVEIERDGFNRTVWFALPHELKPYILTKGFVGLDGCSLTIGKVEDSRFNVH
                     LIPETLERTLFGSRKAGDRINIEIDPNTQAIVDTVERLMAQRYAK"
     gene            complement(15811..16425)
                     /locus_tag="ACFJAG_000954"
     CDS             complement(15811..16425)
                     /locus_tag="ACFJAG_000954"
                     /EC_number="2.7.7.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0061603 - molybdenum cofactor
                     guanylyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase"
                     /protein_id="HFC3980278.1"
                     /translation="MKTSNFPKSPPALKTFALILAGGLADRMGGEDKGLALLEGRPLI
                     DRVIGKIRPQVSHIVISANRNLEEYARRSPHVFPDARQWQHFGPLSALCTAANDLQLA
                     AADWLLIVPCDMPYLPDDLVARFESVSKRTPLCNAFYVETPVTMHYNIMYIRPQILQS
                     AIPYLFSGMKTLRSWLQQQRARPVRFEFDGHFADLNTQTDLQEG"
     gene            16632..18401
                     /locus_tag="ACFJAG_000955"
     CDS             16632..18401
                     /locus_tag="ACFJAG_000955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HFC3980279.1"
                     /translation="MILPTRFSDGIPLSLRLKLLTGLWVGLAALSVVLTLLLSFRLEN
                     AASVIEEAGNLKMQAYRLAYMAGEGSPRAQIDNQIAEFEKSLKRISQSDAIHPLIPSD
                     NPLAYDLIQSMLIIDWQANILPPLQAYRRPTQIELYRFAGNIELFLQALENAGEKNTW
                     WLRRFQWVIMLMTLVSSVLMLFWHQIWVIRPLQALREGAERIGQRHFDIPVPEDGTPE
                     FKQVGRCFNQMALRLKTLYDDLEGQVAEQTHNLEKQNRNLTLLYRTTRDLHQSYTPRQ
                     AAEEFLNHILPAVGAQSGNICLENGSDTDISVHTAEHGKKPPLEKYHDETFPIEYQNE
                     KLGMLSLGFSDGTSLTGDDRTLLQTLIRQLGVSLAGAKQEEEKRLLAVLQERSLIAQG
                     LHDSIAQALTFLNLQVQMLETAFAENKREEAAENIGFIKTGVQECYEDVRELLLNFRT
                     KISNKEFPEAVADLFARFTQQTGITVETVWENGSFLPTQDEQLQMIFILQESLSNIRK
                     HARATHVKFTLSEYGGRFTMTIQDNGQGFDTEKIGEPTGSHVGLHIMQERAKRIRAVL
                     EIRSQAQQGTTVSLTGAPKESLP"
     gene            18398..19054
                     /locus_tag="ACFJAG_000956"
     CDS             18398..19054
                     /locus_tag="ACFJAG_000956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HFC3980280.1"
                     /translation="MTIKIILIDDHTLFRSGIKALLSRQHGFEVIGEAADGLSGIKMI
                     SRLQPDVVLLDLDMPGMNGREALSQIISINPQQAVIMLTVSEDSDDLTECMRIGARGY
                     LLKNINADFLLESIRKAAEGDNVFSPEMTAKLVKSLISPQPAQRTQALSSLTPRELEI
                     LGYLAAGHSNKIIARHLDLAESTVKVHVQNLLRKLNLSSRVQAAVYAIRHNVPQPVPE
                     "
     gene            complement(19255..20259)
                     /locus_tag="ACFJAG_000957"
                     /pseudo
     CDS             complement(19255..20259)
                     /locus_tag="ACFJAG_000957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_304669545.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
BASE COUNT         4691 a         5872 c         5094 g         4682 t
ORIGIN      
        1 ttggatatgt ccaatcctac agtgttacgc aatatataag gggttgccgt tccgcagttg
       61 ggcggcagca tacacgttcc tttcggcgta ttctcgccgt tgcgcggcga atatctcgac
      121 ctgcttgccc atgcgccgtc aacgggtttt cagacggcat tcgatatcgg gacgggctcg
      181 ggcgtacttg ccgccatttt ggcgaaacag ggcattcctt ccgtcatcgg cacggatacc
      241 aatccgaggg cggttgcctg cgcccgtgcc aatattgccc gtttgggttt tgaaaaacag
      301 gttgaaatcc gcgaaaccga tttatttccc gaagggtttg ccgacctgat tgtctgcaat
      361 ccgccctggc ttcccgccaa gccgacttcc gccgtcgaat ccgcgttata cgaccccgaa
      421 tctgcgatgc tggctgcgtt tttgcgtgat gcgccaaaca tctgaatccc gacggagaaa
      481 tccgtcttat catttccgac ctcgccgtgc atttggggct gcggtctgcc gactttttgg
      541 aaaaggcatt tatccgggcg ggtttgcgtg ttgaggatgt tttgaaaacc aaaccggttc
      601 acaaaaaagc tgccgattcg aacgatccgc tggcttttgc ccgaaacagg gaaactactt
      661 tcctgtgccg tttgaaaaag gcataagggg cggtggcgtg cttccgacgg taggcatcgg
      721 aacgcccgcg ccgccggcac ggcatcattc gggcggatta ttcttgtgaa aatacccgct
      781 caagcatact gtccaacgcc gtctgacgga ctttgacggt gtttaccgcc tgacaaaatg
      841 tctttttgcc gccgaaaaat acgaattttt ccctggcgcg ggtaatggcg gtatataaca
      901 gctccttact caatccggac aatgcatcgt ccccttcgtc cgaaggtgcg tcggaaggcg
      961 gcagcagcca gacttcccga tattccgaac cttggctttt gtggacggtc atggcgaatg
     1021 cgggttcaaa ttcgggcagg cagcttaccg ctaccttttt aaatccgtcc gcatcggcaa
     1081 aataggcggc aaggctgccc tgccgtccga catcttccat aatcagtccg atgtcgccgt
     1141 tgaacagctc aagcgcgtag tcgttctgtc tgatcataat cggctctccg gcgaaatagg
     1201 ccaaatgttc cggtatgttc attttgcggc gtacatagct gcaataggct tcgttgaagt
     1261 cttccgcatc ctgccgccaa gctgccagaa ccacgatatc cgagatacct gcgtatgcgg
     1321 cttcgatatt gccgtctttt accgcctgcc aataggcttt gtgcgcccgg tacaaccttt
     1381 cgacccgagc attcggactg cattccgaat gttccagttc gtccggaaac cggtcaaaca
     1441 atgcccacgc cccttcatcg cccgatacgg cggcacgggc aaggcagccg atgccgctgt
     1501 tgtcgccgaa gcggtggctg aacgacagat gggcggtgtt ttgcgccaac acgggcggat
     1561 ttgcgctgac gctgaaaccg tgttccggaa ggaaaccggc cagcctttgg tgcgtttctc
     1621 cgtccaaaac ggttttttgc gacaaaacgg acagcaccgc cccgattccg acggacggga
     1681 gctggttttc atcgcccagc agaatcacgc gcgcgccggt tttgaccgct ttcaaaagtt
     1741 gcagcatcaa tgcggtatcc aacatggagg cttcatcgac aatcagcacg tcgaacggca
     1801 gcggacggat atggtcgaac gccgcctgca ttttgggcgg gctcagctta agcagtcggt
     1861 ggacggtttg cccttccagt ttgagcaaat ggcggcggac ggcctccggc gcgtcaaaac
     1921 cgttgattga acggtgcagc gcgcgcgcca tatgtgccgc cgctttgccc gtcggtgcgg
     1981 caagcgcgat atggggaaga ttttcgtttt caccgcaaat cagtgccagc agtttggcaa
     2041 ccgttgtcgt tttgcccgtt cccggccctc cggtaatcac cataaaaaac tgcaacagtg
     2101 ccaaggcggc cgcatcgcgc tgtccttcgc ttcccgcgcc ttgaaaccat tttgcgaggt
     2161 tttgccgcgc gcctgccgcg tcgggggcgg acgtgccggc tgccgccaag cgttttattt
     2221 cggcagccaa atcgtattcc aactgccaca tcctgcccaa aaacagcctt ctgccttcca
     2281 aaatcaaagg cgcggcggat gttccgacca cgggtgcgag tgccgacagc gcgtcagcct
     2341 cgtccccgct caaacggata aacgaatgac cgttttgcaa tgcctgaaac aggcgttcgg
     2401 tacagtttgc aagcacttcg ttgcccgaac ccgcatagcg ttccaaaaaa cggattgccg
     2461 cccttgccgc cgcttgggca aattcatctg tctgcagttc catcgtattc cttgtcgaaa
     2521 tgccgtctga aggcacgggg cttcagacgg tgcgtgttgt ttcggctgtt taggcgtttg
     2581 cgccctgtct ggggtgcagg ctgccgtctt tcatgaccat cacgcgctcg aagcggccgg
     2641 cgagttcgtc gtcgtgcgtt acgaccacca gccccgttcc caattccgtt ttcagttcca
     2701 gcatcatatc caaaacattc cttgcgtttg cccggtcgag gttaccggtc ggttcgtcgg
     2761 caagcaggca tttgggttgc gtaaccaagg cgcgcgcaat ggcggcacgc tggcgttcgc
     2821 cgccggacag ttcgcccgca cggtgcgtcg aacggtgttt cagtccgacc ttgtcgagca
     2881 tcgccattgc cgtttctacc gcctctttac ggcttttttt gccgatcaga agcggcatca
     2941 tcacgttttc cagtgccgaa aattcaggca gaagatgatg gaactggtac acgaaaccga
     3001 gatggcggtt gcgcaaatcg cccaaacgcc gctggtttaa ggcacgcaaa tcctcgccca
     3061 tcagcagcac cctgccttca gacggcatat ccagcccgcc caaaatatgc agcagcgtcg
     3121 atttgccgct gcccgaagag ccgatgatgc cggtgctttc ccccgtgcgg atttccaaat
     3181 ccaagccgta cagcaccgga acgtccaaac cgccgtcacg gtagcgtttg cccacgcctt
     3241 cgcatttcaa aatcaaatca ctcataacgc aaagcctccg ccggttgggt ttttgacgcg
     3301 cgccagctcg ggtacagtgt cgccacgaaa gacagcccca aggaaatgca ggcaatcagg
     3361 gcaacgtcgc ccatatcgac atcactgggc aggtagtcga taaaataaac ctgcgaattg
     3421 atgaggtgga caccgagcag gttttcaaaa aacgccacga ccctgccgac gttccaaccc
     3481 caaagcacgc cgcagaccac acccgccagc gtgccgaaaa agcctgaaaa cgcgccctgc
     3541 accataaaaa tcttcatcac gccggcaggg gaaagaccca aagtccgcaa aatcgcaatg
     3601 tccgcctgct tttccgtaac cgccatcacc aaggaagaga caaggttgaa cgccgccacg
     3661 gcgataatca gcgtcaggat aatgaacatc atccgttttt ccagttcgac cgcttcaaaa
     3721 tagctgcggt tgctgtacgt ccaatcgcgc acccaaaccg tgtccctttg cgcctccgga
     3781 atcagcgttg ccgtcaaggc gggggcgttt tgcggatcgg caagcttcag ccgcagcccc
     3841 gcaacttcct tatccaagcg gtacagtacg cgcgcgtctt ggatatgcgt catcgccaat
     3901 gagttgtcca cttcgtaaac acccgtcttg accaggccga ccacggtaaa ctgcttcagg
     3961 cgcggcacga ctccggcagg ggtaacgttg ccctccggcg taattaccgt aaccttgccg
     4021 ccgacttccg cccccaaagc ctccgccaaa ccgacaccga ggataatgtc aaactcgccc
     4081 ggaatcaggt cttcaaactt gcctgccggc attttgtcgc cgtattccac cactttgcgc
     4141 tcttcagacg gcaaaatgcc gcgtatctga acgcccctga tttcgcccgc gtttgccagc
     4201 aatgcctgat tggaaacata gggcgcggca gccaaaatgc ctttgcggtt ttcggcaaac
     4261 cgaagcaggt tgcgccaatc cgtatccgta ttgtcgatat agccgatttc ggcgtgcggc
     4321 gcgacattca ggagctgccc gcgtatttct ttctgaaagc cgttcataac cgacaagacg
     4381 acaatcagcg cggttacgcc caaggcgatt ccggcaatcg aaaccatcgt gataaacgac
     4441 ataaagccgt tgcgcttttt cgccctgaga tacctcaagc ctatccaagc ctctagagaa
     4501 aacataacgc taccttaaaa atgtctgcaa acgtgccgcc ccggacggcg gtttggggga
     4561 ggcggcaaaa gtttattgta ccgtaaaacc ccggcagcgt ccgaacggca ggctgtgtaa
     4621 ataaagacgc ggtatgtggc aaattcggaa aaacaggacg gaaaacttgc acaacgcgcc
     4681 gaactaccct atccttctct tgaaacaaaa ccttttcttt aaggaaaaca atgaatatca
     4741 ggaaaatctc cgctttgtgt gctgttgccg tttttactgt ttcgacagcc tatgccaaag
     4801 aaatcaaaat cgatgccaac aacacgcctt attccgaagc cgacgcgcaa aagctggcgg
     4861 caacggcagt cggtatgggc gttaaggaac ctgtcagcct gaacggcggc agcggcagca
     4921 ttaccgtttc cggcagcagc gcggcgcagt gcgtctttac ggtcggcagc gggggcactt
     4981 tgcagattca agggctcaac tgcaagtaaa ccgcccgaaa aaatgccgtc tgaaggcttc
     5041 agacggcatt ttgcattggc ggcgttacgc cccgccttct ttaatcagac gccgttcgta
     5101 caccgcctgc gccagcgttc ccgcatcgac atattccaat tcgccgccca atgggatgcc
     5161 ctgcgacagc ctgctgacct tgtaaggcag gtttttgaaa aactcggaca ggacatacgc
     5221 tgtggcattg ccttctgcgg taaaggcggt cgcgataatg atttcttcga tttccccgcc
     5281 gtccagccgt tgcgccagcc tgtccaatgc gatggcggat acgtccattc ccaatgccgt
     5341 attgatttgc cccatcagga cgaaatacag cccgtcgtgg cagtttgccg cttctatatt
     5401 cgacacgtcg gcaggcatat gcaccaccat cagccgccgc ccgtcgcgtg tttcatcggc
     5461 acaaatatcg cacaatccgc cttcgcaaaa tgtattgcac cttgcgcaat ggcgaacctg
     5521 cctcaatgcc gtctgtaagg catccaccag ctcttcagcc tctttgcgct tttgctgcaa
     5581 cagatggtac gccatccgct gtgccgattt cggcccgacg ttgggcaata ctttcagcgc
     5641 accgatcagg cgttggaatg catcctgttt tttggaattc atcatactcc gccatatggg
     5701 aaaacggtcg gaatattccg accgttatgt tgtcaacaaa agtgtcaatt actgaccatc
     5761 gccgttgtca accgattgtg ctcctttagt ctgtttgatt tttccgttga aatagcggat
     5821 cagcaggtcg aaagtattgg cagactgctg ttgcgccaaa gcctgtttcg caggaggaag
     5881 ctgtgcggca atatcctccg gaggcgtgac tgcctgcacc tcgacaatca cgggtgccgg
     5941 cagaccggtc agtctgacat aggcgggttt gccgtttgcc ggttttgctt tcagcagttc
     6001 cgcataagcc tcgggcggca tggactgcct tgcctgctgc gcgcccaaaa cggacacttc
     6061 cgaccatttc acgtcaactg ccttgccgcc gttcagttgg gtaagcactt cttttgcctt
     6121 gttttcggca agtttggcgg cttcggtacg gatataggcc tgacgcaccg catctttggc
     6181 ttcttcaaac agtaggtttt tttcttcgcg gacttctttg gcgcggacga cccacgcggt
     6241 ttcgctgttg atggtcagca cttcggaatt gtgttttttc ttcaatacgt cgtcgctgaa
     6301 tacggcattg attaggtttt cgggcatgcc ggacatttgt gcgtcctgcc tgctcagcca
     6361 agtttcttgg gtttccactt tcaaaccgct gtttttggcg gcttcggcaa gcgaggaggg
     6421 atgattgaac gcatcgtcgc ccagcttttc ttttgccttg ttgaagtcgg caaccgcctt
     6481 tttcattttc aattcgtttt cgacggcggc tttttcctgc tcgaaagaag gtttggcttc
     6541 atgtgccggc aaacgcgcca cgcgctcttc aaacgcattt ttcacttccg tttcactgac
     6601 ggtctgcttg tctgcaaaat ccttcagatt caaggcgaca tattccaatt tgaccgcctg
     6661 cggcagcaga tagtcttttt tgttcgcatt ataaaatttc tgcaaatcgg cttcagacgc
     6721 tttgacttgg gcgatgaact cgtcggggtt gaaagtgtgc gaacggatgg tgcggttgac
     6781 ctgcgtcagc ctgatcagct gttccgcctg cgcgtcgccg accaatacgc cgttttggac
     6841 gaggcttacc aaattctgca aggcaaactg atcgcggatt tcttcgacaa actggtcttc
     6901 agacatatgg cgttgcgaca ggtattgact caaaagcgcg tgactgaatt tgccgtttgc
     6961 gtcgtggaaa ttgggatcgt ccacaatcat ctgcttgatt tgttcggaag aaaccgaaat
     7021 gcccatcagc ttcgcgccct gtttcaggta ggcgcgttgc agcagggatt ggaacaccgc
     7081 gtcgcgccaa gggctgccgc cgtccgcctg ctcgttctgc atggcgttgt tgattgagtg
     7141 ctcgctgatt ttttcgtcgc ccacttggac gatgtagtcg gcgcccggat gggaaaccgt
     7201 gctgacgccg aagccgacaa aagttaatgc aatcaggcct aataagactt gggcgggtgt
     7261 tctgtatttt tcgatggaat ggaacatatt ttcagattgg gaatgggaaa ttcaagtcgg
     7321 gtattgtaac ggtttttatc cctgtctgca cggggcttgc cggttgaaga tgccgtcgta
     7381 ggtttcttcg ctgaagccga cgtaaaccct gctgccgcac tccaatacgg gacgcttgat
     7441 caggctcggc atttcggaca tcagtttgac ggcctccgcc gtcgaggaca gggctttttg
     7501 ctgtgtttcg gcatcgagtt tgcgccagct tgtcccgcgt ttgttgaaca gggttgccaa
     7561 aggcacttgt tccagccacg agcagatttc cgcttcagac ggcatctgtt ttttgaaatc
     7621 ccgaaaccca aactccaagc cgtatccggc aagcctgttt ttggcttttt tgactgtgtc
     7681 gcaatttgga atgccgtgaa ggattatcat ttggaaacct tttgcctgaa ataataaaac
     7741 cgatatttta ctataagtgt ctgaaaattt gcccgtctgt ttcagacggc ggggcggtta
     7801 tgttacaatc cgaaaattcg aaaaatttaa tctcttgttc aataaaggtt ttacccataa
     7861 tgatttctac caacggcatt accatgcagt tcggcgcgaa gccgctgttt gaaaacgtat
     7921 ccgtaaaatt cggcgaaggc aaccgctacg gcttgatcgg cgcgaacggt tcgggcaaat
     7981 ccaccttcat gaaaatcctc ggcggcgatt tggaacagac cgccggcgaa gtggcgattg
     8041 aaaacggcgt gcgtttgggt aaattgcgcc aagaccagtt tgcctacgaa gacatgcgcg
     8101 tgctggacgt ggtgatgatg gggcataccg aaatgtgggc ggcgatgacc gagcgcgatg
     8161 cgatttacgc caatcccgaa gccaccgaag acgactacat gaaagccgcc gaactggaag
     8221 ccaagttcgc cgaatacgac ggctacaccg ccgaagcgcg cgccgccgaa ttattaagcg
     8281 gcgtgggcat ttccgaagat ttgcacaatg cgaaaatggc ggaagtcgcc ccgggcttca
     8341 aactgcgcgt attgctggcg caggcgctgt tctccaagcc ggatgtattg ctcttggacg
     8401 aaccgaccaa caacttggac atcaatacca tccgctggct ggaaggcgtg ttgaaccaat
     8461 acgactccac catgatcatc atctcgcacg accgccactt cttgaacgaa gtttgcaccc
     8521 acatggcgga tttggactac aacaccatca ctatttatcc gggcaactac gacgactata
     8581 tgctcgcttc cgcccaatcg cgtgagcgcg ccctgaaaga caatgccaaa gccaaagaga
     8641 aactgcaaga gctgcaagaa ttcgttgccc gtttttccgc caataaatcc aaagcccgtc
     8701 aggcaaccag ccgtctgaaa caggccgaca aaatcaaatc ggaaatggtc gaagtcaaac
     8761 cttctacccg tcaaaacccg tatatccgtt ttgaagccga tgaaaaagcc aagctgcacc
     8821 gtcaggctgt ggaagttgaa aaactggcca aacgctttga aacccagttg tttagaaacc
     8881 tcaacttcat ccttgaagca ggccaacgcc tcgccatcat cggcccgaac ggcgcaggta
     8941 aatctacctt gctgaaactc ttggccggcg cgtacaaccc cgaatattca gacggcctgt
     9001 tgccggacga aggcagcatc aaatgggcgg aaaaagccag tgtcggctac tatccgcaag
     9061 accatgaaaa cgactttgac gtcgatatgg acttgagcga atggatgcgc caatggggtc
     9121 gggaaggcga cgacgaacaa gtcatccgag gcactttggg gcgtttgctt ttcggcagca
     9181 acgacgtggt aaaaaaagtg aaagttctct ccggcggcga aaaaggccgt atgctttacg
     9241 gcaaactgtt gctgttgaaa cccaatgtct tggtcatgga cgaaccgacc aaccatatgg
     9301 acatggaaag catcgaatcg ctgaacatgg cactggacaa atacaacggc acgctgattt
     9361 tcgtctccca cgaccgtcag ttcgtttcct ccctggcaac ccaaatcatc gaactggacg
     9421 gcaaaggcgg atatgaacac tacttgggcg attacgaaag ctatctcgag aaaaaaggcg
     9481 tagcataagc gcacccctcc ggttgaaaca atgccgtctg aagccgcttc agacggcatt
     9541 gttgataact ttaaaatagg aagcatatgc agacttacct cgtcggcggc gccgtccgcg
     9601 attatctttt gggcctgccc gtcaaagacc gcgattgggt ggttgtcggc gcggacgcgc
     9661 aaaccatgtt ggcgcaaggt ttccagccgg tcggcaaaga ttttcctgta ttcctccatc
     9721 ccaaaacgca cgaagaatac gccctcgccc gcaccgaacg caaaaccgcc aagggttacg
     9781 ccggtttcag tttccacgcc gacaaagacg ttacgctgga acaggacttg atgcgccgcg
     9841 acctgaccat caacgcgatg gcgcaagatg cggacggcaa gattatcgac cctttcggcg
     9901 ggcaacggga tttggcggca ggcattttgc gccacgtctc gcccgccttc gccgaagatc
     9961 ccgtccgcat ccttcgtgcc gcccgctttg ccgcgcgtta cggctttgaa atcgccgaag
    10021 aaaccataaa gctgatgcgg cagatggtgg aaaacgacga agcggacgca ttggttgccg
    10081 aacgcgtctg gcaggagttg gcgaaaggtt tgatggaaaa aaatccgcgc aaaatgattg
    10141 aaatgttgcg cgaatgcggc gtgctcaaag tcttgctgcc cgaagtcgac gccctcttcg
    10201 gcgtgccgca acgcgccgac taccatcccg aaatcgacag cggcatccat accctgatga
    10261 cgctgcaacg cgccgccgat atgggtttga gcctgcccga acgctatgcc gccctgctgc
    10321 acgacttggg caaagccaaa acgccgcccg acatcctgcc gcgccaccac ggacacgaca
    10381 tcaacggcgt agaacccgtg cgcgaagtca atcaacggct gcgcgcgccg aggcagtgtg
    10441 ccgagcttgc cgaattggtt tgccgttggc acattatttt ccaccaagtc ggacagctta
    10501 aaagccaaac cattctgaac gtattgaaaa aaaccgatgc cttccgccgt cccgagcgtt
    10561 ttcagacggc attgaacgtc tgcattgccg acacgcaagg ccgtctgaac cgagaacaca
    10621 cgccctaccc ccagcgcgcg cactggctcg ccctgctcga agccgccaat caggcggatt
    10681 cgggcaaaat cgccgccgaa tgccgcgcgc agggaaaagc gcactttatc gccaaacaaa
    10741 tcgaccgggc gcggctggcg caaatcgccc cgctgcaaaa agcgtttcgg ggcgcgtagg
    10801 aaaaagaaaa cgccaaacgc ggcatctttt gaggttcgcc cgcattgccg aaacagcgtc
    10861 ggagaaaggg atggatgaca tcgatttatt cggctgcctt ttaatattcc cttgatgcag
    10921 gcctgattag tcggacaaaa ataccttttg ttcaacggaa ccgatttcta tccggacgga
    10981 aacagccggc tttccccttg caaacggatg gaatcaagcg ggtattcaaa cacagccgtt
    11041 tatttttatt ccgccgccaa gttatgggat agggtttgcg tgtttcgggc aggcaagccg
    11101 cgcaacctta gacgcagtcc gaagttttga aggcggcatc cgggccgggt tttgaaacag
    11161 ccgccgccat atccgctata atccatcctt cagccattcc gcccccgaca taaaatcatg
    11221 accctgaaaa ccgatttatt gcctaaaatc aacaacgaag attatcaacg cctcatcctc
    11281 aaacatagcg cggaattcag cggcggagaa acccgcctgt tgaacgaaat cctcgaaaaa
    11341 ttcaatttcg acgttgttca ggcgcaggca ttggcgcagg cggtaatgca gcaagttcgc
    11401 ttcgatccca acgcctacca catcgacagc gacgacgaag acaccaccgg catctgcccc
    11461 cactgcatca acccgcctat gccgcccctg cgcgactatc tcgtttggcg cgaaacacgc
    11521 ggataaaacg cttttgaccg ttatcttttc aatgccgtct gaaacgccgc cgaccgttcg
    11581 gacggcatac ccgacaaagg gaacactatg ctgcaaaccg acaacctgac cgccgcgcaa
    11641 ccgcaacgca tcgttgccgc ccaaaccgcc tccgcacagg aagaactgct cgaacgcgcc
    11701 ctccgcccca aaacgctgga cgactacatc gggcagcata aagccaaaga gcagctcgcc
    11761 atcttcatcc aagccgccaa aaaacgcggc gaagcactcg accacgtcct gcttttcggc
    11821 ccgcccggac tgggcaaaac cacccttgcc cacatcatcg ccaaagagtt gggcgtaaat
    11881 ttgcgccaaa ccagcggccc cgtcctcgaa cgcgccggcg acctcgccgc ccttttgacc
    11941 aaccttgatc cgcacgacgt attgtttatc gacgaaatcc accggctaag ccccgtcgtc
    12001 gaggaaatcc tctatcccgc gctcgaagac taccggctcg acattatgat aggcgaagga
    12061 cccgccgcac gttccgtcaa aatcgacctg ccgcccttca ccctcgtcgg cgcgaccacc
    12121 cgcgccggta tgctgaccaa cccgttgcgc gaccgcttcg gcatcgtctc ccgcctcgag
    12181 ttttacgaaa accgcgacct taccaccatc gtcagccgtt cggcacaact gttgcagctc
    12241 gatatgggcg aagaaggcgc gatggaagtc gccaaacgca gccgcggcac gccccgcatc
    12301 gccaaccgcc tgttgcgccg cgtgcgcgat ttcgccgacg tgaaaaacaa cggcgtaatc
    12361 gatgccgccg tcgccgatgc cgctttaagt atgctggacg tggacgcgca ggggctggac
    12421 gtgatggaca ggaaattcct cgaagccgtt ttgcacaaat tcggcggcgg ccccgtcggt
    12481 ttggacaacg ttgccgccgc catcggcgaa tctacggaca ccatcgaaga cgttatcgaa
    12541 ccctacctca tccaacaagg ctttttgcaa cgcaccccgc gcggcaggat ggcgaccgaa
    12601 cgcgcctacc tgcatttcgg gctgcccgtc gaaaaataaa ccatgccgtc tgaaaccgaa
    12661 ccgggtttca gacggcatgg ttatcagacg tttgcaccgg caccggtttc atcacttaac
    12721 agaaaccttt tgtccggcag gacagattct ccccgacgaa aataactgtt tccctggcaa
    12781 acggttgaaa cccgtctggc tgccggttga aaaataacgc aatgctgtct gaaacagagc
    12841 taattttcag acggcatttc tatttcaatc attggctcaa ggttcagcct gccgcttttt
    12901 ccagttccgc cctcatcgca gcgattaccg ccttgtaatc cggtttgccg aaaatcgccg
    12961 aaccggcaac aaaggtatcc gcaccggctc gggcaacggc ggcaatattg tcagttttga
    13021 tgccgccgtc cacttcaatg gcaatacgtc tgccgctttt cccttcatag cggtcaagca
    13081 tggcgcgaac ctgtctgatt ttttccaaag tgtgcggaat gaagctctga ccgccgaacc
    13141 cggggttgac cgacatcagc aaaaccatat ccagcctgtc caacacgttt tccaacacat
    13201 atacgggcgt tgccggattc aacaccagcc ccgcctgaca gcccatgtcc cgaatcaggc
    13261 tcaagctgcg gtcgatatgg cggctcgctt cgggatggaa agtgataatc gatgctcctg
    13321 ctttggcaaa cgattgaatt aaatcgtcaa cgggttcgac catcagatgc acatcgatcg
    13381 gcacgcttgc ataaggcttc aacgccgcgc agaccatagg tccgaaggtc aggttcggca
    13441 cataatggtt gtccatcacg tcaaaatgga tcagatccgc acccgccgca atgacatttg
    13501 ccacctcttc tccgaggcgg gcaaagtctg ccgacaaaat actgggtgcg atacggtagg
    13561 cggtcatatt ttttccttca atgcctttat gggcggactt aacgcgggaa agcctcgaaa
    13621 cagcattatt aacaaaagtt aactgccata ataccatctt tcacacggca atcaagtata
    13681 ttgtccgaaa tatccggatt aaaggaaaag ccgtgccgct gcctgctccc tgccgttttg
    13741 ccaaacctgc cgcctctttt ttaagtatgg ctttgctttc ctgccagctt tcccacgccg
    13801 ccacggctta tatccccccg aacgattttc aaccgaactg cgacatacgc cggctcgggc
    13861 tgacacaggg tcagcacaat gagctgcgta aaatccgcgc cgccttcaaa atggcgggcg
    13921 acagggcgcg tttgaaggtt atgcattccg aacacagccg ccgccgctct gtcgtcgaaa
    13981 tcatttcttc ggatgttttt aatcggaacg aggcgcgcga ttatgtcgaa agccgctacc
    14041 actccagcat ggattttgcg gtggacgaat tggaaatcca acaccgcttc ttccatattc
    14101 tcacaccgca acagcagcaa atgtggcttt cttcctgcct caaataatcc ccgaaacact
    14161 cacggcgcac gttgctccgg cagcctgccc gcccagtcgc aggcaaactg ccaagcggaa
    14221 cgtcccgagc ggttgccccg catctgcgcc cactgcaacg ccgccgtccg ggcggcttcg
    14281 tcatatggca catcaaaatc ttccaaccag cttcgcactg ccgccagata atcgttttga
    14341 tcgaacggat aaaaactgag ccacaatccg aatcggtcgg acaaagatac tttttcttcc
    14401 acggcctctt tttgatggat ttctccgcgc acgcctgtcg tacctgcatt ttcatccaaa
    14461 tattcgggca tcagatgccg tctgttggaa gtcgcgtaca ccatcacgtt ggcgcaacgt
    14521 tgggacagac cgccatccaa tgccgttttc aatgccttat aggtttcgtc gccgctttca
    14581 aatgacaaat cgtcgcaaaa cacaatgaat ttttccgggc gttccttcaa aagtgccaac
    14641 agatacggca ggccgatcaa atcgctttta tcgacttcga tcaggcgcaa tcccttatcc
    14701 gcatattcgt gcagcagggc tttgaccagc gaggatttgc ctgttccccg cgcgccgctc
    14761 atcaatacgt tattcgcagg tctgccggca ataaattgtt cggtattacg caccagcaat
    14821 tcggtctgcc tgccgactcc ggcaagccgc gacaaaggga aaacgtgcgg atcgggcaag
    14881 tgttccaaaa aacctttttt gcccgcactc tgccagcgga aggcaagcgc gttccaatcc
    14941 gtatgcccgg gttcgggcgg aagcacggca tccaaacgcc gcaaaacggc ataggcttta
    15001 tcgaggaatt cgttcaattc catctctacc tcactttgca tatctttgcg ccatcagccg
    15061 ttcgacggtg tcgacgattg cctgcgtatt cggatcgatt tcgatgttga tcctgtctcc
    15121 ggcctttctg ctgccgaaca gcgtccgttc caaagtttcg ggaatcagat ggacattgaa
    15181 acggctgtct tcgactttgc ctatggtcag gctgcaaccg tccaagccga cgaacccttt
    15241 ggtcaggata tagggtttga gttcgtgcgg gagcgcaaac caaaccgtgc ggttgaaccc
    15301 gtcccgttcg atttcgacaa tgggcacggt tgccataatg tgtccgctca tgacgtgtcc
    15361 gccgatttcg tcgccgaaac gtgccgcccg ttcgatgttg acgcaatcgc cttccttcag
    15421 cagccccaaa ttggtttttg ccaaagtttc tgccattaaa tcgaagctga cgcggtttcc
    15481 ttcgatttca gtaatcgtca ggcagcagcc gttattggcg accgatgcgc cgtgttgcag
    15541 gttttctgcc gcctcttgcg gaagctcgac gacataagtc tgaaacgcct ccgacgggcg
    15601 gtggattgcc gtcagttttc ccaatccttg aacaatgcct gtaaacataa tcctgtttcc
    15661 ctgtgtcggt aaaaatggtg caaattgtag catttccccg cgaaaaatgc cgtctgaaac
    15721 tccttcagac ggcattgtgc ctccggttcg ggcaaaaacc gcccggtacg ccttgacctt
    15781 tcctttccgc gccggtcggc ggtcttgcac ttatccctcc tgcaaatcgg tttgcgtgtt
    15841 caagtcggca aaatgcccgt caaactcgaa tctgaccggc cgcgcccttt gctgctgcaa
    15901 ccagcttctt aatgttttca tacccgaaaa cagataagga atcgcgcttt gcagaatttg
    15961 cggacggata tacataatgt tgtagtgcat cgttaccggc gtttccacat aaaacgcatt
    16021 gcacaacggt gtgcgtttgg agacgctttc aaagcgcgcg accaaatcgt ccggcagata
    16081 cggcatatcg caaggtacaa tcagcagcca atcggccgcc gccaactgca aatcgttggc
    16141 tgcggtacac aatgccgaaa gcgggccgaa atgctgccac tgccgggcat ccggaaaaac
    16201 atgcgggctg cggcgggcgt attcttccaa attccggttg gcactgatga cgatatggct
    16261 gacctgcggc ctgattttac cgataacgcg gtcaatcagc ggtctgcctt ccaacagtgc
    16321 cagccctttg tcttccccgc ccatacggtc ggccaggcct cctgccaaaa tcaatgcgaa
    16381 cgtttttaat gcgggcgggc ttttgggaaa gtttgaggtt ttcatagttt cagtctgccg
    16441 tttccgatat tttagaagcg cgtttgaaaa cggcgtcgta taaattcatg ttatttgaat
    16501 tttatcataa cgtgatttaa cactgaaagc attgaggctt aagttttcct taacctgtcc
    16561 tttctgagca gttgtttcta attccaaaga atgatattgt ttgcaccgtt taaaacgact
    16621 ttcctccgaa tatgatactg ccaacccgat tttcagacgg catccccctt tccctgcgcc
    16681 tgaaactcct gaccggcttg tgggtcggtt tggcggcact gtctgtcgtt ttaactctgc
    16741 tgctttcttt ccgcctggaa aatgccgcct cggtcatcga agaggcgggc aatctgaaga
    16801 tgcaggcata ccggcttgcc tatatggcgg gcgaaggctc gccccgcgca caaatcgaca
    16861 atcagattgc cgaatttgaa aaaagtttaa aacgcatttc ccaaagcgat gccatccatc
    16921 cgctgattcc ctccgacaat ccccttgcct acgatttgat acagtccatg ctgattatcg
    16981 actggcaggc caacatcctc cccccgttgc aggcataccg ccgccccaca caaatcgagc
    17041 tttaccgctt tgccggcaat atcgaactgt ttttgcaggc gttggaaaat gccggcgaaa
    17101 aaaacacttg gtggctcagg cggtttcaat gggtcattat gctgatgacg ctggtgtcat
    17161 ccgtgctgat gcttttttgg caccagattt gggttatccg tccgctgcag gcgttaaggg
    17221 aaggtgcgga acgcatcggt cagcggcatt tcgacatccc tgttcccgaa gacggtacgc
    17281 ccgaattcaa acaggtcggg cggtgtttca accaaatggc gctcaggctg aagactttat
    17341 acgatgattt ggaaggacag gttgccgaac aaacccacaa ccttgaaaag caaaaccgca
    17401 acctgaccct gctgtaccgg accacgcgcg acctgcatca atcctatacg ccgcgacagg
    17461 cggcggaaga atttttgaac cacatcctgc ccgccgtcgg cgcgcaatcc ggcaacatct
    17521 gcctggaaaa cggttccgac acagacattt ccgtccatac ggccgaacac ggcaaaaagc
    17581 cccctttgga aaaataccat gacgaaacct tccccatcga atatcaaaac gagaaactgg
    17641 gcatgctttc gctcggcttt tcagacggca cttccctcac cggagacgac cgcacgctgc
    17701 ttcaaaccct gattcggcaa ttgggcgtat cgctcgccgg ggcgaaacag gaggaagaaa
    17761 aacgtctgct tgccgtattg caggaacgca gcctgattgc acaggggctg cacgacagca
    17821 tcgcgcaggc attaaccttc ctgaacctgc aggtacagat gctggaaacc gcctttgccg
    17881 aaaacaaacg ggaggaagcc gcagaaaaca tcggctttat caaaacaggc gtgcaggaat
    17941 gttatgaaga tgtccgcgaa ctgctgctca atttccgtac caaaatcagc aataaagaat
    18001 ttcccgaagc tgttgccgac ctgttcgcgc gcttcacgca acaaaccggg ataacggtcg
    18061 aaaccgtttg ggaaaacggt tcgttcctgc ctacacagga cgagcagctc caaatgattt
    18121 tcatcctgca agaaagcctg tccaacatcc gcaaacacgc ccgcgccacc catgtaaaat
    18181 tcaccctttc cgaatacggc ggacgcttta ccatgaccat ccaagacaac ggacaaggtt
    18241 tcgacacgga gaaaatagga gaacctacgg gcagccatgt cggactgcac atcatgcagg
    18301 agcgtgccaa acgcatccgt gccgttttag aaatccgttc ccaagcacaa cagggaacca
    18361 ccgtctcatt gacgggcgca cccaaagaaa gcctaccatg accatcaaaa tcatcctgat
    18421 agacgaccac accctcttcc gcagcggcat caaagccctt ttgtcgcgcc aacacggttt
    18481 tgaagtcatc ggcgaagccg cagacggact ctcgggcatc aaaatgatca gtcggctgca
    18541 acccgatgtc gtcctgctcg atttggatat gccaggcatg aacgggcgcg aggccttgtc
    18601 ccaaatcatc agcatcaatc cgcagcaggc agtcattatg ctgaccgttt ccgaagacag
    18661 cgacgacctt accgaatgta tgcgcatcgg cgcgcgcggc tacctgctga aaaacatcaa
    18721 cgccgatttt cttctcgaaa gcatacgcaa agccgccgaa ggcgataatg tattctcgcc
    18781 cgagatgacc gccaaactcg tcaaaagcct gatttccccc caacctgccc aaaggacgca
    18841 ggcactctcc tcacttaccc ctcgtgaact ggaaatcttg ggctatctcg ccgcaggaca
    18901 cagcaacaaa atcatcgccc gccacctcga tcttgccgaa tccaccgtca aagtccacgt
    18961 tcaaaacctg ctccgcaaac tcaacctcag cagccgggtg caggccgccg tttacgccat
    19021 ccggcacaac gtcccccaac ctgtgccgga atagacgttc agacggcatc gggtcaggaa
    19081 aaaagcaatg cgcccctttg acggggtgca atatataagg gacggcacac cggatgccgt
    19141 ccctttaagt acgccattac cgccgtaacc cggacggaat ggcttaggca gtttatttcc
    19201 aagaatattt cacacccacg gtgccttggt agcctttatg tctgttgctt ccgcatcctg
    19261 ccgataattg ccttgcctgt cccgagaaag ggtttgattt tcgccacggc gttggtggag
    19321 cgtatccagc atcgcatagc ctgattccaa gttttgacgt ggaacgagtg cgtaggccgg
    19381 tgcgcttggc gtgatgatgg ttttatcttg attcggcgtg gttaaagtcc agaagtattc
    19441 tgtcgcgccc gcctcatctt tgtgtgaaac caattgcaat tcccccgccc ctgtggtttt
    19501 ggcagttccg ctaaaagtat cgcgcattgt gtaggtatgt ttagcgtctt cgatatttaa
    19561 tttaccggtt tccgccccct tgtcttgtcc caaaacctta acaacggcgg cactgcgttt
    19621 gtagcggtcg gaaagttcgc cgatcgaacc gtcgataata ttttctttgc catctttacc
    19681 cactgaaatg accgttgttt ttcctgaagc atcgcctgtg atttccagta aatcagattg
    19741 agaatttcct ccttgatcat cacccggcga gttccattct gtattgactt ttaacacacc
    19801 gtctttaccg acataatttc cttcaatggt gagtttgtct gcataggatt gattggcaag
    19861 cgtaatgatg ccgccgttgg tgaatgttcc tttttcaaat acagaagttg tacccgataa
    19921 agaaatacct gtattagata gggttagcgt gccgcctgat aataatgtag tcccttcggg
    19981 tgttgttaat gatgtgtctt tttttaggtg aaaagtagct tttgttagtt ttatggttcc
    20041 aatatcttct gatttgaatt ccattgcgcc atttgtaatt tttagcacag cattggtaat
    20101 agggaggggg aagcgcattg taaatgattt ttctgttcca tctggattga ttaatgtacc
    20161 agatgcgcca aagatctctc cttcagggat agaaacagtt ccatcagaaa ttgatggttt
    20221 atttgcgctt ttatcactgt gtttatgaat taatgtaatt ggggctgtac tagattatcc
    20281 ctaaattcca caccgatccc gcaggatttt tagctgccgg gacggtgtgc cggagttaa
//
LOCUS       DAXFZM010000031        20037 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.031, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000031 DAXFZM010000000
VERSION     DAXFZM010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 20037)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20037)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20037
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.031"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            65..958
                     /locus_tag="ACFJAG_000958"
     CDS             65..958
                     /locus_tag="ACFJAG_000958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HFC3980281.1"
                     /translation="MVTFSKIRSFLAIAAAALLAACGTAGNNAARKPVQTAKPAAVVA
                     LALGGGASKGFAHIGIVKVLKENGIPVKVVTGTSAGSIVGSLLASGMSPDRLELEAEI
                     LGKTDLVDLTLSTSGFIKGEKLQNYINRKVGGRQIQQFPIKFAAVATDFETGKAVAFN
                     QGNAGQAVRASAAIPNVFQPVIIGRHKYVDGGLSQPVPVSAARRQGANFVIAVDISAR
                     PSKNVGQGFFSYLDQTLNVMSVSVLQNELGQADVVIKPQVLDLGAVGGFDQKKRAIRL
                     GEEAARAALPEIKRKLAAYRY"
     gene            1061..2164
                     /gene="prfB"
                     /locus_tag="ACFJAG_000959"
     CDS             1061..2164
                     /gene="prfB"
                     /locus_tag="ACFJAG_000959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016149 - translation release factor
                     activity, codon specific [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HFC3980282.1"
                     /translation="MEAEVINQLNNTLNDLEKRSEDIRVYMDYQGKKDRLEEVIGLSE
                     DPELWNDPKRAQEIGKESKILEGIVLTLDNIASGIEDNRMLIEMAVEENDEEGFAAVK
                     EDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDWAGMLFRMYSRYAER
                     KGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRYSPFDSNNKRHTS
                     FASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQC
                     QNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIRSYVLDSSR
                     IKDLRTGYEVGNTKAVLDGDLDGFIEASLKQGV"
     gene            2243..2602
                     /gene="rnpB"
                     /locus_tag="ACFJAG_000960"
     ncRNA           2243..2602
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="ACFJAG_000960"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            complement(2934..4391)
                     /locus_tag="ACFJAG_000961"
     CDS             complement(2934..4391)
                     /locus_tag="ACFJAG_000961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HFC3980283.1"
                     /translation="MSRHPARTGEKTFFGHPFQLSTLFHIELWERFSFYGMQGILLIY
                     LYYTADKGGLGIDKTLAGGIVGAYSGSVYLSTILGAWFADRVWGAEKTLFLSGIVVML
                     GHIVLAAAPGLYGLLIGLIFIALGSGGVKSTASSMVGALYEQDEMRPLRDAGFSIFYI
                     AINIGGFLGPLLTGLLQENIGFHYGFGAAAVGMAFGLWRYSLGRKNLPHPTVPHPLSK
                     GQGKTAAAVGITLIAALATAIKTGLVNLDNFSGILLSTVILAVIAYFARLLTNPRVSS
                     DNKRHIIAYIPLFLTICMFWAVWFQIYTVATVYFDETVNRTIGSFTVPVAWKDSMQSL
                     WVILFSGLMAAMWTKMGRKQPKTPLKFAMAVFVTGASFLGFVPFISSGTPMPIAVFAL
                     IVLAITIGELMISPIALSISTKIAPPLFKTQMVALNFLAFSLGFTLGGVLFEKGYQAG
                     DEIGFYRLLFYIGAATGFLLLLLVPKLNKMLEGTD"
     gene            complement(5173..9342)
                     /locus_tag="ACFJAG_000962"
     CDS             complement(5173..9342)
                     /locus_tag="ACFJAG_000962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translocation/assembly module TamB
                     domain-containing protein"
                     /protein_id="HFC3980284.1"
                     /translation="MTDTAPTDTDPTENGTRKMPSEHRPAPPAKKRRPLLKLSAALLS
                     VLILAVCFLGWIAGTEAGLRFGLYQIPSWFGVNISSQNLKGTLLDGFDGDNWSIETEG
                     ANLKISRFRFAWKPSELMRRSLHITEISAGDIAIVTKPTPPKEERPPQGLPDSIDLPA
                     AVYLDRFETGKISMGKTFDKQTVYLERLNAAYRYDRKGHRLDLKAADTPWSSSSGSAS
                     VGLKKPFALDTAIYTKGGFEGETIHSTARLSGSLKDVRAELTIDGGNIRLSGKSVIHP
                     FAESLDKTLEEVLVKGFNINPSAFVPSLPDAGLNFDLTAIPSFSDGIALEGSLDLENT
                     KAGFADRNGIPVRQVLGGFVIRQDGTVHIGNTSAALLGRGGIRLSGKIDTEKDILDLN
                     IGINSVGAEDVLQTAFKGRLDGSIGIGGTTASPKISWQLGTGTARTDGSLAIASDPAN
                     EQRKLVFDTVNISAGEGSLTAQGYLELFKDRLLKLDIRSRAFDPSRIDPQFPAGNING
                     SIHLAGELAKEKFTGKMRFLPGTFNGVPIAGSADIVYESRHLPRAAVDLRLGRNIVKT
                     DGGFGKKGDRLNLNITAPDLSRFGFGLAGSLNVRGHLSGDLDGGIRTFETDLSGTARN
                     LHIGKAADIRSLDFTLKGSPGTSRPMRADIKGGRLSLSGGAAVVDTAGLTLEGTGAQH
                     RIRTHAAMTLDGKPFKLDLDASGGINRELTRWKGSIGILDIGGAFNLKLQNRMTLEAG
                     AERVAASAANWQAMGGSLNLQHFSWDRKTGISAKGGARGLHIAELHNFFKPPFEHNLV
                     LNGDWDVAYGHNARGYLNISRQSGDAVLPGGQALGLNAFSLKTRFQNDRIGILLDGGA
                     RFGRINADLGIGNAFGGNMANTPLGGRITASLPDLGALKPFLPAAAQNITGSLNASAQ
                     IGGRVSSPSVNAAVNGSSNYGKINGNITVGQSRSFDTAPLGGRLNLTVADAEVFRNFL
                     PVGQTVKGSLNAAVTLGGSIADPHLGGSINGDKLYYRNQTQGIILDNGSLRSHIAGRK
                     WVIDSLKFRHEGTAELSGTVSMENSVPDVDIGAVFDKYRILSRPNRRLTVSGNTRLRY
                     SPQKGISVTGMIKTDQGLFGSQKSSMPSVGDDVVVLGEVKKEAAASLPVNMNLTLDLN
                     DGIRFSGYGADVTIGGKLTLTAQPGGNVRGVGTVRVIKGRYKAYGQDLDITKGTVSFV
                     GPLNDPNLNIRAERRLSPVGAGVEILGSLNSPRITLTANEPMSEKDKLSWLILNRAGS
                     GSSGDNAALSAAAGALLAGQINDRIGLVDDLGFTSKRSRNAQTGELNPAEQVLTVGKQ
                     LTGKLYIGYEYGISSAEQSVKLIYRLTRAIQAVARIGSRSSGGELTYTIRFDRLFGSD
                     KKDSAGNGKGK"
     gene            complement(9397..11244)
                     /locus_tag="ACFJAG_000963"
     CDS             complement(9397..11244)
                     /locus_tag="ACFJAG_000963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter assembly complex family protein"
                     /protein_id="HFC3980285.1"
                     /translation="MHDTRTMMIKPTSLLLPALFFFPHAYAPAADLSENKAAGFALFK
                     SKSPDTESVKLKPKFPVRIDTQDSEIKDMVEEHLPLITQQQEEVLDKEQTGFLAEEAP
                     DNVKTMLRSKGYFSSKVSLTEKDGAYTVHITPGPRTKIANVGVAILGDILSDGNLAEY
                     YRNALENWQQPVGSDFDQDSWENSKTSVLGAVTRKGYPLAKLGNTRAAVNPDTATADL
                     NVVVDSGRPIAFGDFEITGTQRYPEQTVSGLARFQPGTPYDLDLLLDFQQALEQNGHY
                     SGASVQADFDRLQGDRVPVKVSVTEVKRHKLETGIRLDSEYGLGGKIAYDYYNLFNKG
                     YIGSVVWDMDKYETTLAAGISQPRNYRGNYWTSNVSYNRSTTQNLEKRAFSGGIWYVR
                     DRAGIDARLGAEFLAEGRKIPGSDVDLGNSHATMLTASWKRQLLNNVLHPENGHYLDG
                     KIGTTLGTFLSSTALIRTSARAGYFFTPENKKLGTFIIRGQAGYTVARDNADVPSGLM
                     FRSGGASSVRGYELDSIGLAGPNGSVLPECALLVGSLEYQLPFTRTLSGAVFHDMGDA
                     AANFKRMKLKHGSGLGVRWFSPLAPFSFDIAYGHSDKKIRWHISLGTRF"
     gene            11615..12844
                     /gene="sstT"
                     /locus_tag="ACFJAG_000964"
     CDS             11615..12844
                     /gene="sstT"
                     /locus_tag="ACFJAG_000964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA];
                     GO_process: GO:0015826 - threonine transport [Evidence
                     IEA];
                     GO_process: GO:0032329 - serine transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine transporter SstT"
                     /protein_id="HFC3980286.1"
                     /translation="MAFGKSLFHAIGRVSLVRQIAAGLALGIVIGSVSPQLGLAAGLF
                     GSLFVGALKAVAPVLVFILVAATIAQHQKGNKAHIRPIIVLYLIGTFSAALTAVIAGM
                     VFPTHIVLAGAGDVSAAPPSGIVEVLKSLLMNLVANPINAIANANYIGILAWALVLGA
                     ALRNHGSDVTRQVVADLAEAVSTVVKWIIRFAPLGIFGLVSSTIAETGFGALAGYAKL
                     LAVLLGCMAFIALAVNPAIVWWKIRRNPYPLVFTCLRESGVYAFFTRSSAANIPVNMA
                     LAKKLGLHEDTYSISIPLGATVNMGGAAITITVLAMAAAHTQGIQVDFATALLLSLVA
                     TVSACGASGVAGGSLLLIPLACSLFGISNDVAMQVVAVGFIIGVIQDSAETALNSSTD
                     VLFTAAADLGRQRNRAE"
     gene            12995..14284
                     /locus_tag="ACFJAG_000965"
     CDS             12995..14284
                     /locus_tag="ACFJAG_000965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HFC3980287.1"
                     /translation="MFKRRVIAMACIFPLSACGGGGGGSPDVKSADTPSKPAAPVVAE
                     NAGEGVLPKEKKDEEAAGGAPQADTQDATAGEGSQDMAAVSAENTGNGGAATTDNPKN
                     EDAGAQNDMPQNAAESANQTGNNQPAGSSDSAPASNPAPANGGSDFGRTNVGNSVVID
                     GPSQNITLTHCKGDSCNGDNLLDEEAPSKSEFEKLSDEEKIKRYKKDEQRENFVGLVA
                     DRVKKDGTNKYIIFYTDKPPTRSARSRRSLPAEIPLIPVNQADTLIVDGEAVSLTGHS
                     GNIFAPEGNYRYLTYGAEKLPGGSYALRVQGEPAKGEMLVGTAVYNGEVLHFHMENGR
                     PYPSGGRFAAKVDFGSKSVDGIIDSGDDLHMGTQKFKAAIDGNGFKGTWTENGGGDVS
                     GRFYGPAGEEVAGKYSYRPTDAEKGGFGVFAGKKDRD"
     gene            14284..14487
                     /locus_tag="ACFJAG_000966"
     CDS             14284..14487
                     /locus_tag="ACFJAG_000966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate:quinone oxidoreductase"
                     /protein_id="HFC3980288.1"
                     /translation="MLMPPEAQVFITAGRRVQIIKQAPEKGGIPKSGTEIAARIGGIP
                     QPAGETVGSSRNVGYFRPPFSGC"
     gene            14547..14795
                     /locus_tag="ACFJAG_000967"
     CDS             14547..14795
                     /locus_tag="ACFJAG_000967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980289.1"
                     /translation="MFQHSAGSNRQQQGDNALNPALRGGRVRAGLGKGIAFPNRGGAT
                     GCALCAERVCGNGMPSEAGAFRRHCDVWGAGPVQIRIS"
     gene            complement(14788..15003)
                     /locus_tag="ACFJAG_000968"
     CDS             complement(14788..15003)
                     /locus_tag="ACFJAG_000968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980290.1"
                     /translation="MFKLGVYACLGLFAGWVLLLIVQLWFSFLEAELFFKITLTMAGL
                     FVIILAALLVCGQYFSEKKMKDNGFIN"
     gene            complement(14996..15211)
                     /locus_tag="ACFJAG_000969"
     CDS             complement(14996..15211)
                     /locus_tag="ACFJAG_000969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4177 domain-containing protein"
                     /protein_id="HFC3980291.1"
                     /translation="MKEYKVVIYQESLLSSLFFGAAKVNPVNFSAFLNKQTPEGWRVV
                     TMEKDLRRMLLFFKREAYVVILERDRV"
     gene            complement(15414..16757)
                     /gene="argG"
                     /locus_tag="ACFJAG_000970"
     CDS             complement(15414..16757)
                     /gene="argG"
                     /locus_tag="ACFJAG_000970"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004055 - argininosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HFC3980292.1"
                     /translation="MNQNHTILQNLPVGQKVGIAFSGGLDTSAALLWMKLKGALPYAY
                     TANLGQPDEDDYNAIPKKAMEYGAENARLIDCRAQLAHEGIAAIQCGAFHVSTGGIAY
                     FNTTPLGRAVTGTMLVSAMKEDDVNIWGDGSTYKGNDIERFYRYGLLTNPALKIYKPW
                     LDQQFIDELGGRHEMSEFLIANGFNYKMSVEKAYSTDSNMLGATHEAKDLEFLNSGIK
                     IVKPIMGVAFWDENVEIEPEEVSVRFEEGVPVALNGKEYADPVELFLEANRIGGRHGL
                     GMSDQIENRIIEAKSRGIYEAPGMALFHIAYERLVTGIHNEDTIEQYRINGLRLGRLL
                     YQGRWFDSQALMLRETAQRWVAKAVTGEVTLELRRGNDYSILNTESPNLTYQPERLSM
                     EKVEGAAFTPLDRIGQLTMRNLDITDTRAKLGIYSQSGLLALGKGSVLPQLGNKQ"
     gene            16882..17682
                     /locus_tag="ACFJAG_000971"
     CDS             16882..17682
                     /locus_tag="ACFJAG_000971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence/damage-inducible protein A"
                     /protein_id="HFC3980293.1"
                     /translation="MNAFNLIIIGDEILHGSRQDKHFAFFKSLLESKGLKLNQVQYLP
                     DEPDLLVRQLRRSFSDGIPTFVTGGIGATPDDRTRQTAAAALDLPVVRHPEAAKFIEG
                     ITRKRGKPLDSPEHAQRLKMADFPEGAELVPNPFNNIAGFSIREHYFFPGFPVMAHPM
                     AEWVLETYYAGRFNQTERGSRSVYVFEQPESRITPIIEHIEQTYPGVRSYSLPSVGWT
                     HSDGTQVKPHIEFGIKAEGEAVNLLDAAWAEVLHSLDGLGAELKNRVN"
     gene            17722..18708
                     /locus_tag="ACFJAG_000972"
                     /pseudo
     CDS             17722..18708
                     /locus_tag="ACFJAG_000972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227764.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="S49 family peptidase"
     gene            19369..19620
                     /locus_tag="ACFJAG_000973"
                     /pseudo
     CDS             19369..19620
                     /locus_tag="ACFJAG_000973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_060537127.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            complement(19615..19811)
                     /locus_tag="ACFJAG_000974"
                     /pseudo
     CDS             complement(19615..19811)
                     /locus_tag="ACFJAG_000974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215773.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor"
     gene            19913..20037
                     /locus_tag="ACFJAG_000975"
                     /pseudo
     CDS             19913..20037
                     /locus_tag="ACFJAG_000975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017805306.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
BASE COUNT         4426 a         5062 c         5948 g         4601 t
ORIGIN      
        1 aaggagattg ttaagaaaag caatctccct ttgacggggt gcgatatgta aaggaatgga
       61 aaatatggta acgttttcaa aaatcagatc atttttggca atcgccgccg ccgcgttgct
      121 tgccgcctgc ggtacggcgg gaaacaatgc cgcccgcaag ccggtgcaaa ccgccaaacc
      181 cgccgcagtg gtcgctttgg cactcggtgg cggcgcatct aaaggatttg cccatatagg
      241 aattgttaag gttttgaaag aaaacggtat tcctgtgaag gtggttaccg gcacatcggc
      301 aggttcgata gtcggcagcc ttttggcatc gggtatgtcg cccgaccgcc tcgaattgga
      361 agccgagatt ttaggtaaaa ccgatttagt cgatttaacc ttgtccacca gtggttttat
      421 caaaggcgaa aagctgcaaa attacatcaa ccgaaaagtc ggcggcaggc agattcagca
      481 gtttcccatc aaatttgccg ccgttgccac tgattttgaa accggcaagg ccgtcgcttt
      541 caatcaaggg aatgccgggc aggcggttcg tgcttccgcc gccattccca atgtgttcca
      601 gccagtcatc atcggcaggc acaaatatgt tgacggcggt ctgtcgcagc ccgtgcccgt
      661 cagtgccgct cggcggcagg gggcgaattt cgtgattgcc gtcgatattt ccgcacgtcc
      721 gagcaaaaat gtcggtcaag gtttcttctc ttatctcgat cagacgctga acgtgatgag
      781 cgtttccgtg ttgcaaaacg agttggggca ggcggatgtg gttatcaaac cgcaggtttt
      841 ggatttgggt gcagtcggcg gattcgatca gaaaaagcgc gccatccggt tgggcgagga
      901 ggcagcacgt gccgcattgc ctgaaatcaa acgcaaactg gcggcatacc gttattgacg
      961 ctatgccgtc tgaacgtatt tccagaaggc ttcatccata gaaaaaaata cccgaatccc
     1021 gtacaatacg cccctaaaat tttgaaagaa cgaaagaatc atggaagccg aagtaatcaa
     1081 ccagctcaac aacaccctga atgatttgga gaagcgtagc gaagacatcc gcgtttatat
     1141 ggattatcag ggcaagaaag accgattgga agaagtcatc gggctttccg aagaccccga
     1201 gctttggaac gacccgaaac gtgcccaaga aatcggcaaa gagagcaaaa tccttgaagg
     1261 catcgtgctg acgctcgaca acatcgcttc gggtatcgaa gacaaccgta tgctgattga
     1321 aatggccgtc gaagaaaacg acgaagaagg ttttgccgcc gtgaaggaag acgtggcggg
     1381 gctggaaaaa cagatggcgg atttggagtt caaacggatg ttcaaccagc ccgccgaccc
     1441 gaacaactgc tttatcgaca tcaccgccgg cgcgggcggt accgaagcgg aagactgggc
     1501 ggggatgctg ttccgtatgt acagccgcta tgccgagcgc aaaggcttca aaatcgaaat
     1561 ccttgaggaa gacgacggcg aaatcgcagg catcaaccgc gccaccatcc gagtggaagg
     1621 cgaatacgct tatggtttgc tgcgtaccga aaccggcgtt caccgtctgg tgcgctactc
     1681 gccgtttgat tcgaacaaca aacgccatac ctcgtttgcc tccgtgttcg tttaccctga
     1741 aatcgacgat tccatcgaaa tcgaaatcaa ccccgccgat ttgcgcatcg acacctaccg
     1801 tgcatcgggc gcgggcggtc agcacatcaa caaaaccgac tccgccgtgc gtattaccca
     1861 cgagccgacg gggattgtgg tgcaatgtca aaacgaccgt tcgcaacacg ccaacaaagc
     1921 ggccgcgatg gaaatgttga aatccaaact gtatgaattg gaaatgcgca aacgcaacga
     1981 agagaaacag gcattggaag aaggtaaatc cgatgtgggt tggggcagcc aaatccgttc
     2041 gtatgttttg gattcctcac gtatcaaaga cttgcgtaca ggctacgaag tcggcaacac
     2101 caaagccgta ttggacggcg acttggacgg ctttatcgaa gccagcctga aacagggtgt
     2161 gtagtttagg ctgtatgccg tctgaaacct gtaccgtttc agacggcatt tttgcgtttc
     2221 gtgttataat ccgcgccgca cacgggacgg gcagacagtc gccgcgtatc gcgtaaggca
     2281 tacggggagg aaagtccggg ctccgcaggg tagaatgccg gttaacggcc gggcgcggta
     2341 acgcgacgga aagtggaaca gaaagcaaaa ccgccgatgg ctgctttggc agcacaggca
     2401 agggtgaaaa ggtgcggtaa gggcgcaccg cgcatttggt aacaatatgc ggcaggccaa
     2461 accccattcg gagcaagacc aaacagaacg caatgacgct gcccgccgag cgttcgggta
     2521 ggttgcttga gcataccggc aacggtatgc ctagaggaat gactgtccga gacagaaccc
     2581 ggcttaccgc ctgtccggtg tgcatccgac acgcaaatgc cgtctgaaac ctgaaatacg
     2641 gttcggacgg catttttatt taggctgtgt ttttatattc cgttgatgca gccctgatga
     2701 gtcggacaaa atgcctttta ctcaatagga ccggtttccg cccaagcgga aataaacggc
     2761 tatttccctt gcaaacagac ggaatcaggc gggtatttaa atgacaatcg gcaggctgcc
     2821 ttccggttgg ggggggggaa agcctgtcct gtcgggtgga aacggtttgg tttcattatg
     2881 cggaaaaatg ccgtctgaag ggttcagacg gtatcggcgc atcggggcag gacttagtct
     2941 gtgccttcga gcattttgtt caatttgggg acgagcagga gcagcaggaa gcctgtggct
     3001 gcgccgatgt agaacagcag ccggtagaag ccgatttcgt cgcccgcctg atagcctttt
     3061 tcaaacaata cgccgcccaa agtgaagcct aatgaaaagg caaggaaatt aagggcgacc
     3121 atttgggttt tgaataaagg cggtgcgatt ttggtggaga tggacagcgc aatcggggaa
     3181 atcatcagtt cgcctatcgt gatggcgagg acgatcagtg cgaaaaccgc aataggcatc
     3241 ggcgttccgg aggaaataaa gggaacgaat cccaaaaacg acgcgccggt aacaaatacc
     3301 gccatagcga atttcagcgg ggttttgggt tgtttgcgcc ccatttttgt ccacattgcc
     3361 gccatgagtc cggaaaacag gatgacccac aggctttgca tagaatcttt ccaggcgacg
     3421 ggtacagtaa acgaaccgat ggtgcggttg acggtttcgt cgaaatagac ggttgccacg
     3481 gtgtaaatct gaaaccagac ggcccaaaac atacagatgg tcaggaaaag cgggatgtag
     3541 gcgatgatgt gccgtttgtt gtcggaactg acgcgggggt tggtcagcag gcgggcgaaa
     3601 taggcgatga cggcaaggat gacggtagat aagaggatgc cggagaaatt gtcgaggttg
     3661 acaagcccgg ttttgatggc ggttgcaagt gcggcgatga gggtgatgcc gacggcggcc
     3721 gcagttttgc cctgtccttt tgaaagcgga tgggggacgg tggggtgggg caggttttta
     3781 cgtcccaagg aataacgcca caagccgaat gccataccga ccgccgccgc gccgaaacca
     3841 taatggaaac cgatgttttc ttgaagcagt ccggtcaata aggggcctaa gaagccgccg
     3901 atattgatgg cgatgtagaa aatggaaaat cccgcatcgc gcagcgggcg catttcgtcc
     3961 tgttcgtata atgcgcccac catagaactg gccgtagatt tcacgccgcc gctgcccaat
     4021 gcgatgaata tcagcccgat tagaaggccg tacaggcccg gtgcggcggc aaggacgatg
     4081 tgcccgagca ttacgacgat gcccgagagg aagagggttt tttccgcacc ccatacgcgg
     4141 tcggcaaacc acgcgcccaa aatggtggac aggtacacgc tgccgctgta tgcgccgaca
     4201 atgccgcctg cgagggtttt gtctatgccc aagccgcctt tgtcggcggt gtagtagagg
     4261 taaatcagca ggatgccctg cattccgtaa aatgaaaaac gttcccacaa ttcgatatgg
     4321 aagagggtgg aaagctggaa ggggtggccg aaaaatgttt tttctccggt gcgggcggga
     4381 tgccgggaca taaaggttct cctaaaagat tttctctcaa taccgtctga aacggatgcg
     4441 gacggcggcg gtgttttttt gtatgaaaat atcggttttt aaccgatatt ttcattcttt
     4501 gtcaaacgac gcgctgccgt ttttcgcggg cggatgtttt tatatttgtt tcaattcaat
     4561 ggattgtatt ttagaggacg tgttccgata cggcgcgggt aaatcctttt ctgtcaatgg
     4621 cttatccgat agggcggttt ttacttagat ggaaaatcac ttccttatat atccgccacg
     4681 ccgaagggcg cattatggtg gattaacttt aaaccggtac ggcgttgccc cgccccggct
     4741 caaagggaac ggttccctaa ggcgcccaag caccgggcga accggttccg taccatttgt
     4801 actgcctgcg gcccgccgcc ttgtcctgat ttttgttaat ccgctatatt tttcttaacc
     4861 atcccttcca atagccgtgc gaaggttttt ttatatcagt gggaaatgca atattctatt
     4921 gtttttattg tagaatttta aaaacagatt gttgtgttcc gcgtttttgc cggtttggaa
     4981 gcggtggggc gcatcagcct tttataaagg catatcggaa gcctgtataa ggtttttgaa
     5041 catatcgatc ctgttccctt gcaggcggac ggcagcggcg gatggcgaaa ggcgggtttt
     5101 caaatgtccg gtttggcggc gcgtctttca gacggcatgg cggcggagcg tgccgcgccg
     5161 tctgaaaacc gtttatttcc ctttgccgtt tccggcggag tcttttttgt ccgaaccgaa
     5221 gaggcggtcg aaacgtatgg tgtatgtcag ctcgccgccc gacgaacggc tgccgatacg
     5281 ggcaaccgcc tgtatggcgc gggtcagccg gtaaatcagt ttgacggact gttccgcgct
     5341 ggagatgccg tattcgtagc cgatgtagag tttgccggtc agttgtttgc cgacggtcag
     5401 cacctgttcg gcggggttga gttcgccggt ttgcgcgttg cggctgcgct tgctggtaaa
     5461 gcccaaatca tccaccagcc cgatgcggtc gttgatttgc ccggcaagca gcgcgcctgc
     5521 ggctgcggac agggcggcat tgtcgccgct gctgccgctg ccggcgcggt tgaggatgag
     5581 ccaggagagc ttgtcttttt cactcatcgg ttcgtttgcc gtcagcgtaa tgcgcgggct
     5641 gttgaggctg cccaatattt ccacgcccgc accgacgggg gaaaggcggc gttcggcgcg
     5701 gatgttgagg ttggggtcgt tgagcgggcc gacaaaggag actgtgcctt tggtaatgtc
     5761 taaatcctgc ccgtatgctt tgtaacgccc tttgatgacg cggaccgtgc ccaccccacg
     5821 cacatttccg cccggttgcg cggtcagggt cagtttgccg cctatggtaa cgtccgcgcc
     5881 gtagccggag aagcggatgc cgtcattgag gtctaaagtc aggttcatat tgacggggag
     5941 cgatgccgcc gcctctttct tgacttcgcc caatacgacg acatcgtcgc cgacggacgg
     6001 catcgaggat ttttgcgaac cgaacagccc ctgatcagtt ttaatcatac cggtaacgga
     6061 tatgcctttt tgcggcgaat agcgcaggcg ggtgttgccg gaaaccgtca ggcggcggtt
     6121 ggggcgggac aggatgcggt atttgtcgaa caccgcgccg atatcgacat cgggcacgct
     6181 gttttccatg ctgaccgtgc cggagagttc cgccgtccct tcgtgccgga atttcaggct
     6241 gtcgattacc catttcctgc ctgcaatatg cgaacgcagc gagccgttgt ccaagatgat
     6301 gccttgggtt tggttgcggt aatagagctt gtcgccgttg atactgccgc ccaagtgcgg
     6361 gtcggcgatg ctgccgccga gggttacggc ggcattcagg ctgcctttga cggtttgtcc
     6421 gaccggtagg aagttgcgga atacttcggc atcggcaacg gtcaggttga gcctgccgcc
     6481 caaaggtgcg gtatcgaagg agcggctttg cccgacggtg atattgccgt tgattttccc
     6541 gtagttgctg ctaccgttga cggcggcatt gacggacgga gagcttaccc gtccgccgat
     6601 ttgcgcggag gcattcaggc tgccggtaat gttttgcgcg gcggcgggca gaaagggctt
     6661 caatgcgccc aagtcgggaa gggaggctgt aatcctgccg ccgagcggtg tatttgccat
     6721 attgccgccg aaggcgttgc cgatgcccaa atcggcgtta atccgtccga aacgcgcgcc
     6781 gccgtcaagc aggattccga tgcggtcgtt ttgaaagcgc gttttcaggg aaaatgcgtt
     6841 caaacccaaa gcctgcccgc cgggcaatac ggcatcgccg ctttgccggc tgatattgag
     6901 gtagccgcgc gcgttgtgcc cgtaggcgac atcccagtcg ccgtttaaaa ccagattgtg
     6961 ttcgaagggc ggtttgaaga aattgtgcaa ctcggcgatg tgcaggccgc gtgcgccgcc
     7021 ttttgccgat atgccggttt tcctgtccca agaaaagtgt tgcaggttga ggctgccgcc
     7081 cattgcctgc caatttgccg cacttgccgc cacgcgttcc gcaccggctt cgagcgtcat
     7141 acggttttgc agcttgaggt tgaatgcgcc gccgatgtcg aggatgccga tgctgccttt
     7201 ccatcgggta agttccctgt tgatgccgcc tgaagcgtcc aaatcgagtt tgaacggttt
     7261 gccgtccagc gtcatggcgg cgtgtgtgcg gatgcggtgc tgcgcgcccg taccttccag
     7321 cgtcaggccg gcggtatcga caaccgccgc gccgcccgac agggaaaggc ggccgccctt
     7381 gatatcggcg cgcatcgggc ggcttgtgcc gggcgagcct ttgagggtaa aatcgagcga
     7441 acggatgtct gccgctttgc cgatgtgtaa gttgcgcgcc gtgccggaaa ggtcggtttc
     7501 aaaggttcgg atgccgccgt ccaaatcgcc ggaaaggtgt ccgcgtacat ttaaagaccc
     7561 cgcgagtccg aaaccgaaac gggataaatc gggtgcggtg atattgaggt taagccggtc
     7621 gccttttttg ccgaagccgc cgtctgtttt gacgatgttc cgccccaacc gcaaatcgac
     7681 ggcggcacgc ggaaggtggc gggactcgta aacaatgtcg gcactgccgg caatcggcac
     7741 gccgttgaac gtaccgggca aaaaacgcat tttgcccgta aatttctctt ttgccagttc
     7801 accggcaaga tgaatcgaac cgttgatatt gcctgccgga aattgcggat cgatgcgtga
     7861 agggtcgaat gcgcgggaac ggatgtccag cttgagcagg cggtctttaa acagctcgag
     7921 atagccttgc gcggtcaggc tgccttcccc ggcggagatg ttgacggtgt cgaacaccag
     7981 tttccgctgt tcgtttgcgg ggtcgcttgc gatggcgagg ctgccgtccg tgcgtgccgt
     8041 gccggtgccg agttgccaag agattttggg cgaggcggtc gtgccgccga tgccgatgct
     8101 gccgtccaac ctgcctttga acgcggtttg cagcacgtct tccgcgccga cggagttgat
     8161 gcctatattt aaatcaagga tgtctttttc ggtgtcgatt ttgcccgaca gcctgatgcc
     8221 gccccgtccg agcagggcgg cggacgtatt gccgatatgc accgtgccgt cctgccggat
     8281 gacaaagccg cccaaaacct gacggacggg gatgccgttg cggtcggcaa agccggcttt
     8341 ggtgttttcc aaatcgagcg agccttccag cgcgatgccg tctgaaaacg acgggatggc
     8401 ggtcaggtcg aaattcagcc cggcatcggg cagggaaggc acgaaggcgg acggattgat
     8461 gttgaatcct ttgaccagta cttcttccaa tgttttatcc aatgattcgg caaacgggtg
     8521 gatgacggat tttcccgaga ggcggatatt gccgccgtcg atcgtcagtt cggcgcgcac
     8581 atccttcagg ctgccgctca gccgcgccgt actgtgtatg gtttcgcctt cgaatccgcc
     8641 tttggtgtaa atggcggtat cgagggcaaa cggttttttc aagccgaccg aggctgaccc
     8701 cgacgaactg ctccacggcg tgtcggcggc cttcaggtcg aggcggtgcc ctttacggtc
     8761 gtaacggtat gccgcgttga ggcgttcgag atagacggtt tgtttgtcaa aggttttgcc
     8821 catgctgatt ttgcccgtct cgaagcggtc gagatagacg gcggcgggca ggtctatgct
     8881 gtcgggcagg ccttgaggcg ggcgttcttc tttaggcgga gtcggtttgg taacgatggc
     8941 gatgtcgccg gcggaaattt cggtaatgtg caggctgcgg cgcatcagtt cggacggttt
     9001 ccatgcgaag cggaagcggc tgattttaag gtttgccccc tcggtttcta tcgaccagtt
     9061 gtcgccgtcg aagccgtcga gcagtgtgcc tttgaggttt tgggaggaaa tgtttacgcc
     9121 gaaccaggac gggatttggt acagcccgaa gcgcaaacct gcttccgtac cggcgatcca
     9181 gccgaggaaa catactgcca aaatcaggac agacagcagt gccgccgaca gcttcagcag
     9241 cgggcggcgt ttttttgccg gcggggcggg gcggtgttca gacggcattt tgcgcgtgcc
     9301 gttttcggtc ggatcggtat ctgtcggtgc ggtatcggtc ataatgtctg tttcaaaatg
     9361 gtttgctgca atgccgtctg aagcggccgt atcggtttag aaacgcgttc ccaagctgat
     9421 gtgccagcgg atttttttgt cgctgtgtcc gtaggcgatg tcgaaggaaa acggcgcgag
     9481 cgggctgaac cagcgcacgc ccagtcccga accgtgtttc agcttcatac gtttgaaatt
     9541 ggcggcggca tcgcccatat cgtggaatac cgcgccggac agggtgcgcg taaacggcag
     9601 ttggtattcc aagctgccca ccaagagggc gcattcgggc aggaccgatc cgttcggacc
     9661 ggcaagcccg atgctgtcaa gttcgtaacc gcgcacggaa gacgcgccgc cgctgcggaa
     9721 catcagcccc gaggggacat cggcattgtc gcgtgcaacg gtgtaacccg cttgtccgcg
     9781 tatgatgaac gtgccgagtt ttttgttttc gggcgtgaag aaataacctg cgcgggcaga
     9841 ggtgcggatt agcgcggtgg aggacaggaa tgtgcccaaa gtcgtcccga ttttgccgtc
     9901 gaggtaatgg ccgttttcgg ggtgcagcac gttgttgagc agctggcgtt tccaagaggc
     9961 ggtcagcatc gtggcgtggc tgttgcccaa atcgacatcc gagccgggga ttttccggcc
    10021 ttctgcgaga aattccgccc ccagcctggc atcgatgccc gcgcggtcgc gcacatacca
    10081 gatgccgccg gagaaggcgc gtttttcgag gttttgggtg gtcgaacggt tgtaggaaac
    10141 gttgcttgtc cagtagttgc cccgatagtt gcgcggctgg ctgatgccgg cggcaagcgt
    10201 ggtttcgtat ttgtccatat cccagacgac cgagccgata tagcctttgt tgaagaggtt
    10261 gtaatagtcg taggcgattt tgccgcctaa gccgtattcc gaatcgaggc ggatgccggt
    10321 ttcgagtttg tggcgtttga cctcggttac gctgactttg acggggacgc ggtcgccttg
    10381 gaggcggtcg aagtcggctt gtacggacgc gccggaataa tgcccgtttt gttcgagcgc
    10441 ctgttggaag tcgagcagca ggtcgaggtc gtagggcgtg cccggttgga agcgcgccag
    10501 gccggagacg gtttgttcgg ggtaacgctg tgtgccggtg atttcaaagt cgccgaaggc
    10561 aatggggcgg ccgctgtcca cgacgacgtt caaatcggcg gtggcggtat cggggttgac
    10621 ggccgcccgg gtgttgccga gcttggcaag cgggtagcct ttgcgcgtta ccgcgccgag
    10681 gacggaagtt ttgctgtttt cccaactgtc ctgatcgaaa tcgctgccta ccggctgctg
    10741 ccagttttcc agcgcgttgc ggtagtattc ggcgaggttg ccgtctgaaa ggatgtcgcc
    10801 gaggatggcg acgccgacgt tggcgatttt ggtgcgcggg cccggtgtga tgtgcaccgt
    10861 ataagctccg tctttttccg tcaggctgac cttgctgctg aaatagcctt tgctgcggag
    10921 catggttttg acgttgtccg gtgcttcttc ggcaaggaat cccgtctgtt ccttatccaa
    10981 aacctcttcc tgctgctgcg tgatgagcgg caggtgttct tcgaccatat ctttgatttc
    11041 actgtcctgc gtgtcgatgc ggacggggaa tttgggtttt aatttgactg attcggtgtc
    11101 ggggcttttg cttttgaaca atgcgaaacc cgccgccttg ttttcggaaa ggtcggcggc
    11161 aggcgcgtat gcgtgcggaa agaaaaataa agccggcagg agcagggagg tcggtttgat
    11221 catcatggta cgggtgtcgt gcatcggtgt ggcggatttc gattctaaca ctgttcggac
    11281 gggacgggac gcttcagacg gcataccgcc gccggtattt cggaggttgc ggcccgccgg
    11341 aaatgtatct gcttgtttta aggcattttg tttccaatcc gcatatggaa aacaggctgc
    11401 gtttcggaat agtgtcgaaa aataggcagg attaaataaa tttattctcg ttcaataaat
    11461 taaaccgttg cgccgaatga taaaacaaag cctgtccctg catagggcaa atcaacgcac
    11521 ctcaaaacac agcttgaaaa ataaaaaaac acagagaatg ggttttcttt taaaatacaa
    11581 cattttttaa catatcacaa cataaggaag aattatggcg ttcggcaaat ccttatttca
    11641 tgcgatcggc cgcgtcagcc tggtcaggca gattgccgcc ggtttggcgt tgggcatcgt
    11701 aatcggttcg gtttcaccgc aactgggctt ggcggcaggc ttgttcggca gcctgtttgt
    11761 cggcgcgctc aaagcggtcg cgccggtttt ggtatttatt ttggtggcgg ccacaatcgc
    11821 gcagcaccaa aaaggcaaca aggcgcatat caggccgatt atcgtccttt acctcatcgg
    11881 cacgttttcc gcagccctga ccgccgtcat cgccggtatg gttttcccga cgcacattgt
    11941 tttggcgggc gcgggcgatg tgtccgccgc gccgccttcc ggcattgtgg aagtgttgaa
    12001 atcgctgctg atgaacctgg tcgccaaccc gattaacgcg attgccaatg ccaactatat
    12061 cggcattttg gcttgggctt tggttttggg cgcggcgttg cggaatcacg gttcggacgt
    12121 tacgcggcag gtcgttgccg atttggcgga agcggtttcc accgtcgtga aatggattat
    12181 ccgttttgcc cctttgggta ttttcgggct ggtgtcgtcc acaatcgcgg agacgggttt
    12241 cggcgcgctg gcgggttatg cgaagctgct tgcggtgctg ttgggctgta tggcgtttat
    12301 cgcgctggcg gtcaatcccg ccatcgtgtg gtggaaaatc cgccgcaacc cttatccgct
    12361 ggtgtttacc tgcctgcgcg aaagcggcgt gtatgccttc tttacccgtt cttccgccgc
    12421 caatatcccc gtgaatatgg ctttggcgaa aaagctgggg ctgcacgaag acacttattc
    12481 gatttccatc ccgttggggg cgaccgtcaa tatgggcggc gcggcgatta cgattaccgt
    12541 tttggctatg gcggcggcgc acacccaagg catacaggtt gattttgcca ccgcgctgct
    12601 gttgagcctg gtggcgacgg tcagcgcgtg cggcgcgtcc ggcgtggccg gcggttcgct
    12661 gctgctgatt ccgctggcgt gcagcctgtt cggcatcagc aacgatgtcg ccatgcaggt
    12721 ggtcgccgtc ggcttcatca tcggcgtgat tcaggattcg gcggaaacgg cgttgaattc
    12781 ttcaaccgac gttttgttta ccgctgccgc cgatttgggc cgacagagaa accgtgcgga
    12841 ataaaccaag ctatgccgtc tgaagcccgt ttggcgttca gacggcatat ttttacaatt
    12901 ttatgggcat atggcggaaa caataccggc tgccttgaat atgtttcaac acacagggcg
    12961 atacataaag cgtcgcccta tgaaggagat gatgatgttt aaacgcagag tgattgcaat
    13021 ggcttgtatt tttccccttt cagcctgtgg gggcggcggt ggcggatcgc ccgatgtcaa
    13081 gtcggcggac acgccgtcaa aaccggccgc ccccgttgtt gctgaaaatg ccggggaagg
    13141 ggtgctgccg aaagaaaaga aagatgagga ggcagcgggc ggtgcgccgc aagccgatac
    13201 gcaggacgca accgccggag aaggcagcca agatatggcg gcagtttcgg cagaaaatac
    13261 aggcaatggc ggtgcggcaa caacggacaa ccccaaaaat gaagacgcgg gggcgcaaaa
    13321 tgatatgccg caaaatgccg ccgaatccgc aaatcaaaca gggaacaacc aacccgccgg
    13381 ttcttcagat tccgcccccg cgtcaaaccc tgcccctgcg aatggcggta gcgattttgg
    13441 aaggacgaac gtgggcaatt ctgttgtgat tgacggaccg tcgcaaaata taacgttgac
    13501 ccactgtaaa ggcgattctt gtaatggtga taatttattg gatgaagaag caccgtcaaa
    13561 atcagaattt gaaaaattaa gtgatgaaga aaaaattaag cgatataaaa aagacgagca
    13621 acgggagaat tttgtcggtt tggttgctga cagggtaaaa aaggatggaa ctaacaaata
    13681 tatcatcttc tatacggaca aaccacctac tcgttctgca cggtcgagga ggtcgcttcc
    13741 ggccgagatt ccgctgattc ccgtcaatca ggccgatacg ctgattgtgg atggggaagc
    13801 ggtcagcctg acggggcatt ccggcaatat cttcgcgccc gaagggaatt accggtatct
    13861 gacttacggg gcggaaaaat tgcccggcgg atcgtatgcc ctccgtgtgc aaggcgaacc
    13921 ggcaaaaggc gaaatgcttg ttggcacggc cgtgtacaac ggcgaagtgc tgcatttcca
    13981 tatggaaaac ggccgtccgt acccgtccgg aggcaggttt gccgcaaaag tcgatttcgg
    14041 cagcaaatct gtggacggca ttatcgacag cggcgatgat ttgcatatgg gtacgcaaaa
    14101 attcaaagcc gccatcgatg gaaacggctt taaggggact tggacggaaa atggcggcgg
    14161 ggatgtttcc ggaaggtttt acggcccggc cggcgaggaa gtggcgggaa aatacagcta
    14221 tcgcccgaca gatgctgaaa agggcggatt cggcgtgttt gccggcaaaa aagatcggga
    14281 ttgatgttga tgccgcccga agcgcaggta ttcattacgg cgggacgacg cgttcaaatc
    14341 atcaaacaag cccccgaaaa aggcggcatc ccaaaatccg gcactgaaat tgccgcgcgt
    14401 atcggcggca ttccgcagcc tgccggggaa actgtcggca gcagccggaa tgtcgggtat
    14461 ttccgcccgc ctttttcggg ctgttgaaat atgaaaataa agcataggcc gtctgaatgt
    14521 tcagacggcc tgttttttta acggctgtgt ttcaacactc cgccggttcc aaccggcagc
    14581 agcagggaga taatgccttg aaccccgctc ttcggggcgg cagggttcgg gccggtttgg
    14641 ggaaaggcat cgcctttccg aatcggggcg gtgcaacggg gtgcgcctta tgtgccgaaa
    14701 gggtttgcgg caacggtatg ccgtctgaag cgggtgcgtt cagacggcat tgtgatgttt
    14761 ggggcgcggg tccggttcaa atccgcatca gttgataaac ccgttgtctt tcattttctt
    14821 ttcagaaaaa tactggccgc ataccagcag ggcggcgagg atgatgacaa acagccctgc
    14881 catagtcagt gtgattttga agaacaattc ggcttcgaga aaagaaaacc aaagttgcac
    14941 aatcagcagc agcacccagc cggcaaacag tccgagacag gcataaacgc cgagcttaaa
    15001 cacggtcccg ctccaaaatg acgacgtagg cttcgcgttt gaaaaacaac agcatacggc
    15061 gcaaatcttt ttccatcgtt acgacccgcc agccttcggg ggtttgtttg ttgaggaacg
    15121 cgctgaaatt gacggggttg acctttgccg cgccgaaaaa caggctggac aacaggcttt
    15181 cctgataaat gacgactttg tattctttca tcgtatttcc ttttcggttg aaaccccgcc
    15241 ctttggggcg gtaggatcag actttatttg ggagggaacc ccttccaaat caggacgata
    15301 cataggtcgg tgctttatgt atcgtcctgt gtgttgaaac ataggattcc tttaatcaag
    15361 ggattgcctt ttcaggcaat cccttaaatt gcagcgatgc aatgcggcga aatttattgc
    15421 ttattgccca actgcggcaa taccgagcct ttgcccaatg ccaacaaacc gctttgcgag
    15481 tagataccca gtttggcgcg ggtgtcggtg atgtcgaggt tgcgcatcgt gagctgtccg
    15541 atgcggtcga gcggtgtgaa cgccgcacct tcgacttttt ccatactcag gcgttcgggt
    15601 tggtaggtca ggttgggcga ttcggtgttc agaatcgagt agtcgttgcc gcgccgcagt
    15661 tcgagggtaa cttcgccggt aacggctttg gcgacccagc gttgggcggt ttcgcgcaac
    15721 atcaaggctt ggctgtcgaa ccagcggcct tggtagagca aacgtccgag gcgcaggccg
    15781 ttgatgcggt attgttcgat ggtgtcttcg ttgtggatgc cggtaaccaa gcgttcgtag
    15841 gcgatgtgga acaatgccat gcccggggct tcgtagatgc cgcgcgattt ggcttcgatg
    15901 atgcggtttt cgatttggtc gctcataccc aagccgtggc ggccgccgat gcggttggct
    15961 tcgaggaaga gttcgacggg gtcggcgtat tctttgccgt tcaatgcaac cggcacgcct
    16021 tcttcaaagc gcacgctgac ttcttcgggt tcaatttcga cgttttcgtc ccagaaggca
    16081 acgcccatga tgggcttaac gattttgatg cccgagttca aaaattccaa gtctttggct
    16141 tcgtgggtcg cgccgagcat attggaatcg gtggagtagg ctttttcaac cgacattttg
    16201 tagttgaagc cgttggcaat cagaaattcg ctcatttcgt gacggccgcc gagttcgtcg
    16261 ataaattgct ggtcgagcca gggtttgtag attttcagcg cgggattggt gagcaagccg
    16321 tagcggtaga aacgctcgat gtcgttgcct ttgtaggtgc tgccgtcgcc ccagatattc
    16381 acatcgtctt ctttcatggc ggaaacgagc atggtgccgg tcacggcgcg gcccagaggc
    16441 gtggtgttga aataggcgat gccgccggtg gaaacgtgga acgcgccgca ttggatggcg
    16501 gcgatgcctt cgtgtgccag ttgtgcgcgg cagtcgatca ggcgggcgtt ttccgcaccg
    16561 tattccattg cttttttggg aatggcgttg taatcgtctt cgtcgggctg gccaaggttg
    16621 gcagtgtagg cataaggcag cgcgcctttg agtttcatcc acaacagcgc ggcagaggta
    16681 tcaagaccgc cggagaaggc gatgccgact ttctgaccga cggggaggtt ttgtaaaata
    16741 gtatggtttt ggttcatgaa aaaatcctcg atagcttgaa aaatcaaagc cattatctta
    16801 taaatagaaa atattgtcag ccatcatgcc gtctgaacgg gtattccgcc gtttcaggcg
    16861 gtatttaaaa ccgaaaacat tatgaacgcg ttcaacctca tcatcatcgg agacgaaatc
    16921 ttacacggca gccgccaaga caaacatttc gcctttttta aatccctgct cgaatccaaa
    16981 gggctgaagc tcaatcaggt gcaatatctg cccgacgaac ccgatttgct ggtcaggcaa
    17041 ctgcgccgca gcttttcaga cggcataccg acgttcgtta ccggcggcat tggcgccacg
    17101 cccgacgacc gcacgcgcca aaccgcagcg gctgctttgg atttgcccgt cgtccgccat
    17161 cctgaagccg ccaagtttat cgaaggcata acccggaaac gcggcaagcc gctcgattcg
    17221 cccgaacacg cccaacgcct gaaaatggcg gatttccccg agggcgcaga gcttgtgccc
    17281 aacccgttca acaacatcgc cggattttcc atccgcgagc attatttctt ccccggcttt
    17341 cctgtgatgg cgcacccgat ggcggaatgg gttttggaaa cttattacgc cggccgcttc
    17401 aaccaaaccg aacgcggcag ccgcagcgtg tatgtgtttg agcagcccga atcgcgcatt
    17461 acgccgatta tagagcatat cgagcaaact tatcccggcg tgcgttcgta cagcctgccc
    17521 agcgtcggtt ggacgcattc agacggcacg caggtcaaac cgcacattga gttcggcatc
    17581 aaagccgaag gagaagccgt caaccttttg gacgcggcgt gggcggaagt gttgcacagc
    17641 ttggacggat tgggagcaga gctgaaaaat cgggtaaact gaaaactgtt tgcccaaatc
    17701 ggacgatatt taaggaaaac catgcaatac cgaatcagaa gagaaaacga agcacccgaa
    17761 gcaaaaaatg cgggggaaac cttatgggag cgcgacatta tgcgcgaagt gctgctgtcc
    17821 gcctatcggg acaggcgcag ggagcggatg tggaaaaaca tctggcgcgc cgtcagcacc
    17881 ctgattctgg ttgccctgat tgcaggcatt ttccgaaaag acgaagccgc attgcagttg
    17941 gcgggcaaca cgccgcatac cgcagtcgtc aacctgtacg gcaaaatcgg caacggcgta
    18001 gaagaccagg tcaaaaaact caaagacggg atggaggccg cctacaaaaa cccgcaggca
    18061 aaagccatcg tcatccgcgc caacagcccc ggcggttcgc ccgtcgtctc caacaccgct
    18121 tttgaagaaa tacgccgtct gaaggcgtag caccccggca tccccgttta tctcgtggca
    18181 gaggatatgt gcgcgtccgg ctgctactac atcgcggcgg cggcggacaa aatctatgcc
    18241 gacccgtcca gcatcgtcgg cagcatcggc gttatcggca gcagtttcga cgcgaccggc
    18301 ctgatggaaa aaatcggcgt aaaacgcagg gttaaaattg cgggcagcaa caaaggcatg
    18361 ggcgatccgt tttcgcccga aacgcccgaa cagtcgaaaa tctgggaaga aatgctgacc
    18421 ggcatacacg gcgaatttat caaagccgtc aaaaccggac gcggcggccg cctcaaattc
    18481 cgacaatatc ccgacgtgtt cagcggtcgc gtgtacacag gcgcggacgc gctgaaagtc
    18541 gggctggtgg acggactcgg caatatttac agcgtggcgc gagacgtggt caaagctccc
    18601 gatgtggtgg attacactcc gaaggacgat ttcggcagaa tcttgggcag acgcttcgga
    18661 gcagaactca aagcaagcgt ttcggaagct ctgcaggccg tccggtagcg ttgtttacag
    18721 tatttctaag ggaataccag aataaaaata tacacaaaaa cactcacctc cccagtatgc
    18781 tgccactaag tcagccgcgt tactatttac cgtgcactta aagccgcaaa aggcaggttg
    18841 tccccgggag gttttgtgca tcctgatacc gatcggttgc tgttgctgtt gctgttgctc
    18901 aaaggacgga aggccgccga taaacgagat tacctgtttg tcgctattga cgatttttat
    18961 actctgccat tttgccggac aaaaccgcag acagtgctgc caagtttctg accgaacatc
    19021 tggctgaccc ctgcttgtac ctggttgagt acgtttactc tgacaatgat aggtaatata
    19081 aagagccgtc caacatgctt tcggtgcagc ttgttatgat aatgggattg gttggaggct
    19141 tgcccgattt gcttgtccgc agaccaacgg taaggcggag cgggttatcc gtaccttgat
    19201 ggagatgtgg catgaggaac agtcgtttga cagtccggaa catcagcaaa aggagttgtg
    19261 ctgctttatt aatttaggcg ctgtcctaga taactaggga aattcaaatt aagttagaat
    19321 tatccctatg agaaaagccg tctaagccgg tataaacaaa ataaactcat tgggctattt
    19381 gtcgcaggtg taactgcaag aacagcggca gagttggtag gcgttaataa aaataccgca
    19441 gcctatgatt ttcatcgttt acgatgactg atttatcaaa acggtccgca tttagaaatg
    19501 tttgatggcg aagtagaagc agatgaaagt tattttggcg gacaacgcaa aggtaaatgc
    19561 ggtcgcggtg ctgccggaaa agtcgcagta ttcaggcttc tcaaacgaaa tggtaaggtt
    19621 tcctttgccg tccgttatgt acgtttcgta acattcgaag acttcctgaa ccctgcccgc
    19681 cgtttcggtt tctgtacccc cctgttagat aaggggggaa gattcgaagc ggttgccggc
    19741 ttcctgccgt ccgccggcgc gtccgtcatc acgccggcaa ccgcctttgt catcccttgc
    19801 ttatctccca tgtgcgaatc ctcaaaaacg ggcaaaaaaa aagccctgtt acttgtagaa
    19861 agtaaagggc gttaattttt gttaatcgcc ccttcttagg gacgcaatat ataaggttta
    19921 tacggttact gtagcgaata ctcaaaccgc tactttattt cctattatcc gcgaacaagt
    19981 gaaacctgac agcattgttt atacggattg ttatcgtcgc tatgatgtat tggatgc
//
LOCUS       DAXFZM010000032        19974 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.032, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000032 DAXFZM010000000
VERSION     DAXFZM010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19974)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19974)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19974
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.032"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(34..387)
                     /locus_tag="ACFJAG_000976"
                     /pseudo
     CDS             complement(34..387)
                     /locus_tag="ACFJAG_000976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815999.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
     gene            complement(440..868)
                     /locus_tag="ACFJAG_000977"
     CDS             complement(440..868)
                     /locus_tag="ACFJAG_000977"
                     /inference="COORDINATES: protein motif:HMM:NF012342.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HFC3980294.1"
                     /translation="MASPASDIKGKYVQSVTVANGVVTAQMKSDGVNKEIKNKKLSLW
                     ARREAGSVKWFCGQPVTRDKAVTDDAVKDVTGNDKIETKHLPSTCRCFQIGSVKWFCG
                     QPVTRDNAGTDAVTADTTGKDKEIDTKHLPSTCRDKSSAE"
     gene            920..1228
                     /locus_tag="ACFJAG_000978"
                     /pseudo
     CDS             920..1228
                     /locus_tag="ACFJAG_000978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228827.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
     gene            complement(1303..3357)
                     /gene="metG"
                     /locus_tag="ACFJAG_000979"
     CDS             complement(1303..3357)
                     /gene="metG"
                     /locus_tag="ACFJAG_000979"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004825 - methionine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HFC3980295.1"
                     /translation="MTRKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECY
                     YCCADDTHGTPVMLAAQKQGIAPEDMIAKVRKEHLADFTGFFIGYDNYYSTHSTENKQ
                     FSQDIYRALKANGKIESRVIEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCG
                     TTYSPTELINPYSAVSGAKPELRESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQPE
                     ALNKMKEWLGEGGETTLSDWDISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNL
                     CDRIGVDFDEYFKAGSQTEMYHFIGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLT
                     VDGQKMSKSRGTFITAKSYLEQGLNPEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSD
                     LVGKYVNIAARASGFIAKRFEGRPKDVSGSALLAKLAAESDTIAEQYENREYARALRD
                     IMALADIVNEYVDANKPWELAKQEGQDERLHEVCSELINAFTMLTAYLAPVLPQTAAN
                     AARFLNLDAITWKNTRETLGEHAINKYEHLMQRVEQKQVDDLIEANKQSIQTASAPVE
                     EGKYEKVAEQAGFDDFMKIDMRVAKVLNCEAVEGSTKLLKFDLDFGFEKRIIFSGIAA
                     SYPNPAELNGRMVIAVANFAPRKMAKFGVSEGMILSAATADGKLKLLDVDAGAQPGDK
                     VG"
     gene            complement(3473..5311)
                     /gene="glmS"
                     /locus_tag="ACFJAG_000980"
     CDS             complement(3473..5311)
                     /gene="glmS"
                     /locus_tag="ACFJAG_000980"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004360 - glutamine-fructose-6-phosphate
                     transaminase (isomerizing) activity [Evidence IEA];
                     GO_process: GO:1901137 - carbohydrate derivative
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HFC3980296.1"
                     /translation="MCGIVGAIRAHHNVVDFLTDGLKRLEYRGYDSSGIAVNTDGKIK
                     RVRRIGRVQLMEDAAREKGISGGIGIGHTRWATHGGVTEPNAHPHISGGMIAVVHNGI
                     IENFESERKRLEGLGYRFESQTDTEVIAHSINHEYAQNGGRLFEAVQEAVKRFHGAYA
                     IAVIAQDKPDELVVARMGCPLLVALGDDETFIASDVSAVIAFTRRVAYLEDGDIALLA
                     SDGIKRLTDKNGLPAERKVKVSELSPASLEPGPHSHFMQKEIHEQPRAIADTAEVFLD
                     GGFIPENFGKNAKSVFESIRSVKILACGTSYYAALTAKYWLESIAKIPADVEIASEYR
                     YRSVIADPDQLVITISQSGETLDTMEALKYAKSLGHRHSLSVCNVMESALPRESSLVL
                     YTRAGAEIGVASTKAFTTQLVVLFGLAVTLAKVRGVVSGEDEARYTEELRQLPGSVQH
                     ALNLEPQIAAWAQQFAKKTSALFLGRGIHYPIALEGALKLKEITYIHAEAYPAGELKH
                     GPLALVDENMPVVVIAPNDSLLDKVKANMQEVGARGGELFVFADLDSNFNAAEGVHVI
                     RAPRHVGELSPVVHTVPVQLLAYHTALARGTDVDKPRNLAKSVTVE"
     gene            5589..6107
                     /locus_tag="ACFJAG_000981"
     CDS             5589..6107
                     /locus_tag="ACFJAG_000981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980297.1"
                     /translation="MKQMLLAVGVAAVLAGCGKDAGGYEGYWREKSDKKEGVIAVKKE
                     KGNYFLNKINVFTGKEESLLLSEKDGALSINTGIGEIPIKLSDDGKELYVERRRYVKT
                     DAAMKDKIIAHQKKCGQTAQAYLDARNALPSNQTYQQRQAAIEQLKRRFEAEFDELEK
                     EIKCNGKPTLLF"
     gene            complement(6389..7714)
                     /locus_tag="ACFJAG_000982"
     CDS             complement(6389..7714)
                     /locus_tag="ACFJAG_000982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase A"
                     /protein_id="HFC3980298.1"
                     /translation="MKKHLLRSALYGIAAAILAACQSRSIQTFPQPDTSVINGPDRPA
                     GIPDPAGTTVAGGGAVYTVVPHLSMPHWAAQDFAKSLQSFRLGCANLKNRQGWQDVCA
                     QAFQTPIHSFQAKRFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDGRRTERARFPIY
                     GIPDDFISVPLPAGLRGGKALVRIRQTGKNSGTIDNAGGTHTADLSQFPITARTTAIK
                     GRFEGSRFLPYHTRNQINGGALDGKAPILGYAEDPVELFFMHIQGSGRLKTPSGKYIR
                     IGYADKNEHPYVSIGRYMADKGYLKLGQTSMQGIKSYMRQNPHKLAEVLGQNPSYIFF
                     RELAGSGNEGPVGALGTPLMGEYAGAIDRHYITLGAPLFVATAHPVTRKALNRLIMAQ
                     DTGSAIKGAVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP"
     gene            7947..8767
                     /gene="efeU"
                     /locus_tag="ACFJAG_000983"
                     /pseudo
     CDS             7947..8767
                     /gene="efeU"
                     /locus_tag="ACFJAG_000983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271751.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0033573 - high-affinity iron permease
                     complex [Evidence IEA];
                     GO_function: GO:0005381 - iron ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0034755 - iron ion transmembrane transport
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="iron uptake transporter permease EfeU"
     gene            8764..9930
                     /gene="efeO"
                     /locus_tag="ACFJAG_000984"
                     /pseudo
     CDS             8764..9930
                     /gene="efeO"
                     /locus_tag="ACFJAG_000984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247121.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="iron uptake system protein EfeO"
     gene            10238..11503
                     /gene="efeB"
                     /locus_tag="ACFJAG_000985"
     CDS             10238..11503
                     /gene="efeB"
                     /locus_tag="ACFJAG_000985"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0033212 - iron import into cell [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron uptake transporter
                     deferrochelatase/peroxidase subunit"
                     /protein_id="HFC3980299.1"
                     /translation="MSQNQPAQPTKRNLFKTALAVGAIGAIGGYFGGKKQGETAERTA
                     ESQHSPQAYPCYGEHQAGIVTPRQAFSIMCAFDVTAQSAKQLENLFRTLTARIEFLTQ
                     GGEYQDGDDKLPSAGSGILGKAFNPDGLTVTVGVGSSLFDGRFGLKDKKTVHLQEMRD
                     FPNDKLQKSWCDGDLSLQICAFTPETCQAALRDIIKHTAQTAVIRWSIDGWQPKSEPG
                     AMAARNLLGFRDGTGNPKVSDPKTADEVLWTGVAANSLDEPEWAKNGSYQAARLIRRF
                     VEFWGRTPLQEQTDIFGRRKYSGAPMDGKKEADQPDFAKDPEGNTTPKDSHMRLANPR
                     DPEFLKKHCLFRRAYSYSRGPASSGQLDVGLVFVCYQANLADGFIFVQNLLNGEPLEE
                     YISPFGGGYFFVLPGVGKGGFLGQGLPGV"
     gene            complement(11575..11904)
                     /locus_tag="ACFJAG_000986"
     CDS             complement(11575..11904)
                     /locus_tag="ACFJAG_000986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein YjdM"
                     /protein_id="HFC3980300.1"
                     /translation="MSLPPCPQCASEYTYEDGGQYICPECAHEWNETESAADLAAQVR
                     DANGAALQNGDTVILIKDLKVKGSSMTIKQGTKVKGIRLQEGDHNIGCKIDGSAMNLK
                     SEFVKKA"
     gene            complement(11979..13349)
                     /gene="glmU"
                     /locus_tag="ACFJAG_000987"
     CDS             complement(11979..13349)
                     /gene="glmU"
                     /locus_tag="ACFJAG_000987"
                     /EC_number="2.3.1.157"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003977 - UDP-N-acetylglucosamine
                     diphosphorylase activity [Evidence IEA];
                     GO_function: GO:0019134 - glucosamine-1-phosphate
                     N-acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0000902 - cell morphogenesis [Evidence
                     IEA];
                     GO_process: GO:0006048 - UDP-N-acetylglucosamine
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HFC3980301.1"
                     /translation="MPQNTLNTVILAAGKGTRMYSQMPKVLHCIGGKPMVERVIDTAA
                     ALNPQNICVVVGHGKEQVLDTVKRDAVWVEQTEQLGTGHAVKTALPHLASEGRTLVLY
                     GDVPLIDVETLETLLEAAGNEVGLLTDVPADPAGLGRIIRDGSGSVTAIVEEKDASAT
                     QKTIREINTGILVLPNAKLENWLNSLSSNNAQGEYYLTDLIAKAVADGIKVRPVRVRA
                     SHLAAGVNNKRQLAELERIFQTEQAQELLKAGVTLRDPARFDLRGRLKHGQDVVIDVN
                     VVIEGEVELGDNVEIGANCVIKNAKIGANSKIAPFSHLEGCEVGENNRIGPYARLRPQ
                     AKLADNVHVGNFVEIKNAAIGKGTKANHLTYIGDAEVGSKTNFGAGTIIANYDGVHKH
                     KTVIGDEVRIGSNCVLVAPVTLGNKVTTGAGSTITRNIEDNKLALARARQTVIEGWMR
                     PEKDKQ"
     gene            complement(13404..13679)
                     /locus_tag="ACFJAG_000988"
     CDS             complement(13404..13679)
                     /locus_tag="ACFJAG_000988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spore cortex protein"
                     /protein_id="HFC3980302.1"
                     /translation="MRKTFLILMTPAALFLSGCAWETYQDGNGKTAVRQKYPAGTPVY
                     YQDGSYSKNMNYNQYRPERRAVLPDQTGNNADEEHRQHWQKPKFQNR"
     gene            complement(13672..14385)
                     /locus_tag="ACFJAG_000989"
     CDS             complement(13672..14385)
                     /locus_tag="ACFJAG_000989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine 5'-nucleotidase"
                     /protein_id="HFC3980303.1"
                     /translation="MQENPTVWLFDLDNTLHDADAGIFHLINRAMTRYTARRLKLSES
                     AASDLRQDYWHRYGATLAGLQIHHPEIDIAEFLRESHPIDAILTRLHGMADTENTLCR
                     LNGRKAVFSNGPSFYVRAVAGALGLENCFDALFGTDDFGLLYKPNPQAYLNVCRLLDV
                     PPECCIMVDDSADNLHQAKALGMKTVRFGAKSHAPPFIDASVSDMAQLARYAETLSER
                     RQNHYNTRTNPENTKECYA"
     gene            14444..15445
                     /locus_tag="ACFJAG_000990"
     CDS             14444..15445
                     /locus_tag="ACFJAG_000990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0030975 - thiamine binding [Evidence IEA];
                     GO_function: GO:0048502 - ABC-type thiamine transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015888 - thiamine transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HFC3980304.1"
                     /translation="MKRKIWLLPLLAVSAYLQAQTEVRLAVHKSFSLPKGLIARFERA
                     NDAKVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPESAP
                     VAVGLPSALAVDYGYVSVNYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPATSSP
                     GLGFLMANIGGLGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGYAA
                     SPAAEVYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPKLAAKLVQWLQSLEV
                     QQAVPSEMWVYPAVKNTRLPDVFRFAQAPAHTTAPAQRDIDANQRGWVSRWIRTVLK"
     gene            15539..16387
                     /locus_tag="ACFJAG_000991"
     CDS             15539..16387
                     /locus_tag="ACFJAG_000991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HFC3980305.1"
                     /translation="MDFKQFDFLHLISVSGWGHLAEKAWAFGLNLAAALLIFLVGKWA
                     AKRIVAVMRAAMTRAQVDATLISFLCNVANIGLLILVIIAALGRLGVSTTSVTALIGG
                     AGLAVALSLKDQLSNFAAGALIILFRPFKVGDFIRVGGFEGYVREIKMVQTSLRTTDN
                     EEVVLPNSVVMGNSIVNRSSLPLCRAQVIVGVDYNCDLKVAKEAVLKAAAEHPLSVQN
                     EERQPAAYITALGDNAIEITLWAWANEADRWTLQCDLNEQVVENLRKVNINIPFPQRD
                     IHIINS"
     gene            16413..16898
                     /locus_tag="ACFJAG_000992"
     CDS             16413..16898
                     /locus_tag="ACFJAG_000992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family protein"
                     /protein_id="HFC3980306.1"
                     /translation="MDALHTIARNLTKKRQTVSCAESCTGGMLAAAFTSVAGSSQWFD
                     QSFVTYSNKAKEYRLGVLPETLLEHGAVSRQTVYEMARGAKAVAQADYAVGISGIAGP
                     GGGGESKPVGTVWFGFAFPGGSCEAMRRFDGNRESVRAQAVAFALERLAGLVENGGDA
                     V"
     gene            complement(16982..18550)
                     /gene="msrAB"
                     /locus_tag="ACFJAG_000993"
     CDS             complement(16982..18550)
                     /gene="msrAB"
                     /locus_tag="ACFJAG_000993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional peptide-methionine (S)-S-oxide
                     reductase MsrA/peptide-methionine (R)-S-oxide reductase
                     MsrB"
                     /protein_id="HFC3980307.1"
                     /translation="MKHRTFFSLCAKFGCLLALGACSPKIVDAGAATVPHTLSTLKTA
                     DNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLH
                     EKKDGEFQKWYAGLNYPKLPVVTDNGGTIAQNLNISVYPSWALIGKDGDVQRIVKGSI
                     NEAQALALIRNPNADLGSLKHSFYKPDTQKKDSAIMNTRTIYLAGGCFWGLEAYFQRI
                     DGVVDAVSGYANGNTENPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYYFRVVDP
                     TSLNKQGNDTGTQYRSGVYYTDPAEKAVIAAALKREQQKYQLPLVVENEPLKNFYDAK
                     EYHQDYLIKNPNGYCHIDIRKADEPLPGKTKAAPQGKGFDAATYKKPSDAELKRTLTE
                     EQYQVTQNSATEYAFSHEYDHLFKPGIYVDVVSGEPLFSSADKYDSGCGWPSFTRPID
                     AKSVTEHDDFSFNMRRTEVRSRAADSHLGHVFPDGPRDKGGLRYCINGASLKFIPLEQ
                     MDAAGYGALKGKVK"
     gene            18696..19949
                     /gene="ftsY"
                     /locus_tag="ACFJAG_000994"
     CDS             18696..19949
                     /gene="ftsY"
                     /locus_tag="ACFJAG_000994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005047 - signal recognition particle
                     binding [Evidence IEA];
                     GO_process: GO:0006614 - SRP-dependent cotranslational
                     protein targeting to membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HFC3980308.1"
                     /translation="MFSFFRRKKKQETPALEEAQVQETAAKVESEVAQIVGNIKEDVE
                     SLAESVKGRAESAVETVSGAVEQVKETVAEMPSEAGEAAERVESAKEAVAETVGEAVG
                     QVQEAVATTEEHKLGWAARLKQGLAKSRDKMAKSLAGVFGGGQIGEDLYEELETVLIT
                     GDMGMEATEYLMKDVRDRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPETKEPF
                     VIMLAGINGAGKTTSIGKLAKYFQAQGKSVLLAAGDTFRAAAREQLQAWGGRNNVTVI
                     SQTTGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKAIPGA
                     PHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVR
                     YIGVGEGIDDLRPFDARAFVDALLD"
BASE COUNT         4084 a         5106 c         6109 g         4675 t
ORIGIN      
        1 ttgatttatt tgaaatttaa ggcctaattt gccttaggtg tcagagtgtt tatcgcggca
       61 ggttgacggc aggtgcttgg tgtcgatgcc gttgttgttt ttgtcgtcgg caacggcgtc
      121 gttgtcggct ttgccgtcgt cgcgctgaac cggctgtccg cagaaccatt ttaccgaacc
      181 gttttcacgc ttggcccaca gggagagttt tttgtctttg atttctttgt ttacgttgct
      241 tgaattcatt gtggcggtga cgacgccttt tgcgacttca acttccttaa catatttgcc
      301 tttgattgat gaagaagatg ccacgccggc agcgccgttg tcggcgggcc atttgccgtt
      361 attcgggtaa tattcggtga cggctgaggg taatacccgg tgatggctga tttatttgaa
      421 atttaaggcc taatttgcct tattcggcag atgatttatc gcggcaggtt gacggcaggt
      481 gcttggtgtc gatttctttg tctttgccgg tggtgtcggc ggtgacggcg tcggtgccgg
      541 cgttgtcgcg cgtaaccggc tgtccgcaga accattttac cgaaccgatt tgaaagcaac
      601 ggcaggttga cggcaggtgc ttggtttcga ttttgtcgtt gccggtgacg tctttgacgg
      661 cgtcgtcggt gacggctttg tcgcgcgtaa ccggctgtcc gcagaaccat tttaccgaac
      721 cggcttcacg cctggcccac agggagagtt ttttgttttt gatttctttg tttacgccgt
      781 ctgatttcat ttgggcggta acgacgccgt ttgcgaccgt aacgctttga acatatttgc
      841 ctttgatgtc ggaggcgggg gatgccacgc cggcagcgcc gttgttttcc gaccatttgc
      901 cgtgattcgg gtaatgtccg gcgaaaacga attgcggcag atgaagccgg gtgcggtttt
      961 gatcaattgc gggcgcggcg ggctggcgga tgaaaacgcg ctgcctgccg cactcaaata
     1021 cgggcagatc ggcggggcgg gtgtcgatgt tttgacggag gaaccgccga ggggcggcaa
     1081 tcccttgctg aatgcacgat tacccaatct gattgttacg ccgcataccg cgtgggcgag
     1141 ccgcgaggct ttggatcggt tgtttgaaat attgttggcg aacattcacg cctttgtgaa
     1201 aggcgaggcg caaaaccgcg tggtttgaac ctgtcgggat tgcggaaaaa aacgccgtct
     1261 gaacgcccaa ggggttcaga cggcgttttt tgagatttct gcctaaccga ctttgtcgcc
     1321 cggctgagcg cccgcatcca cgtcaagcag cttcagtttg ccgtctgccg tggcggcgga
     1381 gaggatcata ccttcggata cgccgaattt tgccattttg cgtggggcga agttggcgac
     1441 tgcgatgacc atgcgaccgt tcaattcggc aggatttggg taagacgcgg cgatgccgga
     1501 gaagatgatg cgtttttcaa aaccgaaatc gaggtcgaat ttcaaaagtt tggtgctgcc
     1561 ttcgacggct tcgcagttca atactttggc gacgcgcata tcgattttca taaagtcgtc
     1621 gaagcccgcc tgttcggcga ctttttcgta tttaccctct tcaacgggcg cggatgccgt
     1681 ctgaatgctt tgtttgttgg cttcgatcaa atcgtccact tgtttttgct ccactcgttg
     1741 cattaaatgt tcgtatttgt tgatggcgtg ttcgcctagg gtttcgcgcg tgttcttcca
     1801 ggtaatcgcg tccagattga ggaaacgcgc ggcgttggcg gcggtttgcg gcaacacggg
     1861 ggcgaggtag gcggtcagca tggtgaaggc gttgatgagt tcgctgcata cttcgtgcag
     1921 gcgttcgtct tgaccttctt gtttggcgag ctcccacggt ttgttggcat cgacgtattc
     1981 gttgacaatg tctgccaatg ccatgatgtc gcgcagggcg cgggcgtatt cgcggttttc
     2041 gtattgctcg gcgatggtgt cgctttcggc ggcgagtttt gccagcaatg cgctgcctga
     2101 aacgtctttc ggacgacctt caaagcgttt ggcgatgaaa cccgaagcgc gggcggcgat
     2161 gttgacgtat ttgccgacga ggtcgctgtt gacgcgcgaa ataaagtctt gcaggttcaa
     2221 atcgatgtct tcgattttgc tgttgagctt ggcggcgatg tagtagcgca tccactcggg
     2281 gttcagacct tgttccaaat aggatttggc ggtgatgaag gtgccgcgcg atttggacat
     2341 tttttgtccg tccacggtca aaaagccgtg tgcatacaca ccggtcgggg cgcggtggcc
     2401 ggagaaatgc agcatggcgg gccagaacag ggcgtggaaa tagaggatgt ctttgccgat
     2461 gaagtggtac atctcggttt ggctgccggc tttgaagtat tcgtcgaaat cgacgccgat
     2521 gcggtcgcac aggtttttaa acgacgccat atagccgacg ggcgcgtcca gccaaacgta
     2581 gaagtatttg cccggcgcgt cggggatttc aaaaccgaaa tacggcgcgt cgcgggaaat
     2641 gtcccagtcg gacagggtgg tttctccgcc ttcgcccagc cattccttca ttttgttgag
     2701 ggcttcgggt tgcagatggg gcttgccgtc gtgcgggttg ttgccggaag tccatgcttt
     2761 gaggaagtcg gcgcattcgc ccagtttgaa gaagaagtgt tcggattcgc gcaattcggg
     2821 tttcgcgccg gaaacggcgg aatacgggtt aatcagttcg gtcggggaat aggtcgtgcc
     2881 gcagacttcg cagttgtcgc cgtattggtc ttgggcgtgg catttcgggc attcgccttt
     2941 gacgaagcgg tcgggcagga acatttgttt ttcggggtcg aaaagctgct cgatgacgcg
     3001 gctttcgatt ttgccgttgg ctttcagcgc gcggtaaatg tcttgggaaa actgtttgtt
     3061 ttcagtggaa tgggtgctgt aataattgtc gtagccgatg aaaaagccgg taaagtcggc
     3121 aaggtgctct ttgcgcactt tggcaatcat gtcttcgggc gcgatgcctt gtttttgcgc
     3181 ggcaagcata acgggcgtgc cgtgggtgtc gtcggcgcag cagtagtagc attcgtggcc
     3241 gcgcagtttt tgaaagcgca cccaaacgtc ggtttggatg tgttcgacca tgtggccgag
     3301 gtggatgctg ccgttggcat agggcagggc ggaggtaact aagattttgc gtgtcatatt
     3361 gtgctttgca aacaatgggt aaaggcggat tataccgcaa atcaaacggg gaaatgccgt
     3421 ctgaagcctg aaaaatcggg cttcagacgg catttttgcc aaccggcggg atttattcga
     3481 cggttacgga tttcgccagg ttgcgcggct tgtccacatc cgtgccgcgc gcgagggcgg
     3541 tgtggtaggc gaggagctgc acggggacgg tatgcacgac gggggacagt tcgccgacgt
     3601 ggcgaggtgc gcggataacg tgcacgcctt cggcggcatt aaaattgctg tcgaggtcgg
     3661 caaagacgaa aagttcgccg ccgcgcgcgc cgacttcctg catattggct ttgactttgt
     3721 ccaacaggct gtcgttgggc gcgatgacga cgacgggcat gttttcgtcc accaaggcaa
     3781 gcggcccgtg tttcagttcg ccggcaggat aggcttcggc gtggatgtag gtgatttcct
     3841 ttagcttcaa cgcaccttca agggcaatcg ggtaatggat gccgcgcccc aaaaacagcg
     3901 cgctggtttt cttggcaaac tgttgcgccc aagcggcaat ttgcggttcg aggttcaaag
     3961 cgtgctgcac gctgccggga agctggcgga gttcttcggt gtaacgtgct tcatcttcgc
     4021 cggataccac gccgcgcact ttcgccagcg ttaccgccaa accgaacagc acgaccagtt
     4081 gcgtggtaaa tgctttagtc gaggcgacgc cgatttccgc accggcacgg gtataaagca
     4141 caaggctgct ttcgcgcggc agggcggatt ccatcacgtt gcagacggag aggctgtggc
     4201 ggtgtcccaa agatttggcg tatttcaaag cctccatcgt gtccagcgtt tcgccggatt
     4261 gggaaatggt aatgaccagt tggtcggggt cggcaatcac gctgcggtac cggtattcgc
     4321 ttgcgatttc gacgtcggcc gggattttgg cgatggattc caaccaatat ttggcggtca
     4381 gcgcggcgta ataggacgtg ccgcaggcaa ggattttgac gctgcggatg ctttcaaaca
     4441 cgcttttggc atttttgccg aagttttcgg ggatgaatcc gccgtcgagg aaaacttccg
     4501 ccgtgtccgc aatcgcgcgc ggctgctcgt ggatttcttt ttgcataaag tggctgtgcg
     4561 gacccggttc caaagaggcg ggcgagagtt cggatacctt gactttgcgt tcggcaggca
     4621 ggccgttttt atcggtcagc cgtttgatgc cgtctgaagc cagcagcgcg atgtcgccgt
     4681 cttcgaggta cgccacgcgg cgcgtaaagg cgatgacggc ggatacgtcc gaagcgataa
     4741 aggtttcatc gtcgcccaaa gcgaccaaaa gcgggcagcc catacgcgcc acaactaatt
     4801 catcaggctt gtcttgggca ataaccgcga tggcgtatgc gccgtggaaa cgtttgaccg
     4861 cttcctgcac ggcttcaaac agcctgccgc cgttttgcgc gtattcgtgg ttgatgctgt
     4921 gtgcgatgac ttcggtatcc gtttgcgatt caaaccggta tcccaaacct tccaagcgtt
     4981 tgcgttcgct ttcaaagttt tcgatgatgc cgttgtgtac gaccgcaatc ataccgccgc
     5041 tgatgtgcgg gtgggcattc ggctcggtaa cgccgccgtg tgtcgcccag cgcgtatgcc
     5101 cgatgccgat gccgccgctg atgccttttt cgcgtgccgc gtcctccata agctgcacgc
     5161 gtccgatgcg gcgcacgcgt ttgattttgc cgtcggtgtt gacggcaatg cctgatgagt
     5221 cgtaaccccg gtattcgagg cgtttgaggc cgtcggtcag aaaatcgacg acgttgtgat
     5281 gggcgcggat ggcgccgacg ataccgcaca taaactgttc cttagtatcc ggttgaaaaa
     5341 aaagatgcgg acggcttccg taccgcacct tccgtttcgg attataaacc gcctcccgcg
     5401 ccggaaaaca gcaaaatgcc gtctgaaggc ttgggcttgc tcaaaaaagg gagggatttc
     5461 cccgcctgac cgggatgggc gttcagacgg cattgcctgc cgccggttta tagtttttgc
     5521 aaatcaatat taacaagctg aaaaaaaaca atatactcgc ccggtcttaa tgttaacgga
     5581 gtatggaaat gaaacaaatg cttttggccg tcggcgtggc ggcggtgttg gcgggctgcg
     5641 gcaaggatgc cggcggttac gagggttatt ggcgcgaaaa gtcggacaaa aaagagggcg
     5701 tgattgccgt caaaaaagaa aaaggcaatt acttccttaa taaaatcaac gtgtttacag
     5761 gcaaggagga gtctttgctt ttgtctgaaa aagacggcgc gctttcgata aacacgggga
     5821 taggggaaat cccgatcaaa ctttccgacg acgggaaaga gctgtatgtc gaacgcaggc
     5881 ggtatgtgaa aaccgatgcg gcgatgaagg acaaaatcat cgcccaccag aaaaagtgcg
     5941 gacaaacggc acaggcatac ctcgacgcgc gaaatgcgtt gccgtcaaac caaacgtatc
     6001 agcagcgtca ggcggcgatc gagcaattga aacggcggtt tgaagccgag tttgacgaat
     6061 tggaaaaaga aatcaaatgc aacggcaaac cgacattgtt gttttagcgt aggacaaccg
     6121 ggaggatgcc gccgtccgaa tcggacgcgt ggtttccata ccggtacggg cgggcgggaa
     6181 tgtccgcctt ttttgttcgg atgcgtttga atacccgtcc gattctgtcc gtttgcaagg
     6241 gggatttccg ttcgggcgga aatccattcc gtcaaataag aaaggcgttt tgtccggccg
     6301 gccggcttgt gcctgcggta tcgcaaaact tcgccttaat gcgcccgatt ggctagggac
     6361 gggcttcgga cggcattgtt ttgccggttc acgggcggta ttcgggcttc atgccgttgg
     6421 gcaggagctg ccagacgtat cctgtggttt tctgtttgcc ggcaagttcg ccggcttcgt
     6481 cgccgtaacc ccaaaaataa tccacgcgca ccgcgccttt gatcgcgctg cctgtatcct
     6541 gcgccataat caggcggttg agggctttgc gggtaaccgg atgggcggtg gcgacaaata
     6601 agggcgcgcc caaggtaatg tagtgccggt cgattgcgcc ggcgtattcc cccatcagcg
     6661 gcgtgcccag tgcgccgacg gggccctcat tgccgcttcc ggcaagctcg cggaaaaaga
     6721 tatagctggg gttttgaccc aaaacttcgg cgagtttgtg cgggttttgc cgcatatatg
     6781 acttaatgcc ctgcatggag gtttgcccga gcttgaggta gcctttgtcc gccatatagc
     6841 gtccgatgga aacatacgga tgctcgtttt tgtcggcata gccgatgcgg atgtatttgc
     6901 cggacggggt tttcagacgg cccgagcctt gtatgtgcat gaaaaaaagt tcgacggggt
     6961 cttcggcgta accgagtatc ggggctttgc cgtcaagcgc gccgccgttg atttggttgc
     7021 gcgtgtggta ggggaggaag cggcttcctt caaacctgcc cttgattgcc gttgtgcgcg
     7081 cggtaatggg gaattgggaa aggtcggcgg tatgcgtgcc gccggcattg tcgattgtgc
     7141 cgctgttttt tcccgtctgc ctgatgcgga caagggcttt cccgccccgc aaaccggcag
     7201 gcagggggac ggagataaaa tcgtcgggaa tgccgtaaat cgggaagcgg gcccgttccg
     7261 tccgcctgcc gtcgcccttc agcaccggtt cgtaatagcc ggtaaccgta cctgcaaggc
     7321 ttccgttgcc tgcaacctgc caaggcgtga aatagcgttc aaaaaaccgc tttgcctgaa
     7381 aggaatggat gggggtttga aaggcttggg cgcacacatc ctgccagcct tggcggtttt
     7441 tcaaattggc gcagccgagg cggaaggatt gcaggctttt ggcaaaatcc tgcgccgccc
     7501 agtggggcat ggacaggtgc ggcacaacgg tatagacggc cccgccgccg gcaaccgtcg
     7561 ttccggcggg gtcggggatg ccggccggcc ggtccgggcc gttgatgacg gatgtgtcgg
     7621 gttgcggaaa ggtttggatg ctcctgcttt ggcaggcggc gaggatggcg gcggcgatgc
     7681 cgtacagggc ggagcggagc aggtgttttt tcataatgga caatgttgtc gtcagtaata
     7741 aaaaaagatg gtttcgggcg gcgttgcggt agccggggag aggggatttt aacacagggc
     7801 gcagccgcag cctgcggaac tttccgccac gcggcaatgc agataaaaat aacttgcatt
     7861 tgtatttgca agtaatgaaa atattccgat aatatattat taattatcct tgttcattcg
     7921 cgtttacgct ggtcgctttt ttaattatgt tgcgcgaggg tatcgaagcc gcgctcatcg
     7981 tcggcatcgt tgccggtttt ttgaaacagt ccggacattc aaaaactgat gcctaaggtc
     8041 tggttcgggg tcgtccttgc ttctttgatg tgtttgggca tcggatacgg catccattcg
     8101 gcaacgggcg agattccccg gaagcagcag gagttcgtcg tcggcattat cggtttggtt
     8161 gccgtcgcga tgctgacttg tgtggtttta tggatgaaaa aggcggcgcg ttcgatgaag
     8221 cggcagcttc gggattctgt acaggcggct ttgaaccgtg gcagcggtca aggatgggcc
     8281 ttggtcggta tggcgtttct tgccgtggcg cgcgaaggtt tggagagcgt tttttttcct
     8341 gcttgccgta ttcaaacaga gcccgacgtg gcagatgccg gccggcgcgg tagcgggggt
     8401 tttggctgcc gccgtgattg gcgcgttgat ttatcagggc gggatgcgcc tgaatctggc
     8461 gaagtttttc cgttggacgg gggcgtttct gattatcgtt gccgccggtc tgcttgccgg
     8521 ctcgctgcgt gcgctgcatg aggcaggcat ttggaacgcg cttcaggaca ttgtgttcga
     8581 cccatcaaaa tatttgcacg aagacagtcc gttgggtgtg ctgctcggcg gatttttcgg
     8641 ctataccgac catccggcgc agggcggggc cttggtttgg ctgctgtacc ttattcccgt
     8701 catgatttgg tttttgcgcg gcagcaggcc gtctgaaact ttaacccgta aagaggaatt
     8761 gaaatgagaa aattcaattt gaccgcattg tccgtgatgc ttgccttggg tttgaccgcg
     8821 tgccagccgc cggaggcgga gaaagccgcg ccggccgcgt ccggtgagac ccaatccgcc
     8881 aacgaaggcg gttcggtcgg tatcgccgtc aacgacaatg cctgcgaacc gatgaatctg
     8941 accgtgccga gcggacaggt tgtgttcaat attaaaaaca acagcggccg caagctcgaa
     9001 tgggaaatcc tgaagggcgt gatggtggtg gacgaacgcg aaaatatcgc cccggggctt
     9061 tccgacaaaa tgaccgtaac cctgctgccg ggcgaatacg aaatgacctg cggccttttg
     9121 accaatccgc gcggcaagct ggtggtagcc gacagcggct ttaaagacac cgccaacgaa
     9181 gcggatttgg aaaaattgtc ctaaccgctc gccgactata aagcctacgt tcaaggcgag
     9241 gttaaagagc tggcggcgaa aaccaaaacc tttaccgaag ccgtcaaagc aggcgacatt
     9301 gaaaaggcga aatccctgtt tgccgccacc cgcgtccatt acgaacgcat cgaaccgatt
     9361 gccgagcttt tcagcgaact cgaccccgtc atcgatgcgc gtgaagacga cttcaaagac
     9421 ggcgcgaaag atgccgggtt taccggcttc caccgtatcg aacacgccct ttgggtggaa
     9481 aaagacgtat ccggcgtgaa ggaaaccgcg gccaaactga tgaccgatgt cgaagccctg
     9541 caaaaagaaa tcgacgcatt ggcgttccct ccgggcaagg tggtcggcgg cgcgtccgaa
     9601 ctgattgaag aagcggcggg cagtaaaatc agcggcgaag aagaccgtta cagccacacc
     9661 gatttgagcg acttccaagc taatgcggac ggatctaaaa aaatcgtcga tttgttccgt
     9721 ccgttgattg aggccaaaaa caaagccttg ttggaaaaaa ccgataccaa cttcaaacag
     9781 gtcaacgaaa ttctggcgaa ataccgcacc aaagacggtt ttgaaaccta cgacaagctg
     9841 agcgaagccg accgcaaagc attacaggct cctattaacg cgcttgccga agaccttgcc
     9901 caacttcgcg gcatactcgg cttgaaataa gccgcaagcg ttcagacggt atttggcggc
     9961 agataccgtc tgaagtttta tagcggatta acaaaaaccg gtacggcgtt gccccgcccc
    10021 ggctcaaagg gaacggttcc ctaaggcgcc caagcaccgg gcgaaccggt tccgtaccat
    10081 ttgtactgcc tgcggcccgc cgccttgtcc tgatttttgt taatccgcta tatccgccat
    10141 atgttgcagg gcgggctttc agaccgccgc tatcggttaa tggaaaaacg gcgtgcaggg
    10201 atgcccaccc tgctgcacgg atattgaagg aaacgccatg agtcaaaacc aacccgcaca
    10261 accgaccaaa cgcaatctgt tcaaaaccgc ccttgccgtc ggcgcaatcg gtgcaatcgg
    10321 aggttatttc ggcggcaaaa aacagggcga aaccgccgaa cgcaccgccg aaagccaaca
    10381 ctcgccccaa gcctatccct gctacggcga acatcaggca ggtatcgtta cgccgcggca
    10441 ggcgttttcc attatgtgcg ccttcgacgt aaccgcgcaa agtgccaagc agctggaaaa
    10501 cctgttccgc acactgaccg cccgcatcga gtttctcacc caaggcggag aataccaaga
    10561 cggcgacgac aaactcccgt cagccggcag cggcattttg ggcaaagcct tcaaccccga
    10621 cggattgacc gttaccgtgg gggtgggcag cagcctgttt gacggccggt tcggactcaa
    10681 agacaaaaaa acggttcatt tgcaggaaat gcgcgacttc cccaacgata agctgcaaaa
    10741 aagctggtgc gacggcgatt tgagcctgca aatctgcgcc ttcacccccg aaacctgcca
    10801 agccgccctg cgcgacatca tcaaacacac cgcccaaacc gccgtcatcc gctggagtat
    10861 cgacgggtgg cagcctaaat ccgaacccgg cgcgatggcg gcgcgcaacc tgttgggctt
    10921 ccgagacggc acgggcaacc ccaaggtttc cgatcccaaa accgccgacg aggttttatg
    10981 gacgggcgtg gccgccaaca gcctcgacga accggagtgg gcgaaaaacg gcagctatca
    11041 ggcagcccgc cttatccgcc gctttgtcga gttttggggc aggacgccgc ttcaagagca
    11101 aaccgacatt ttcgggcggc gaaaatacag cggggcgccg atggacggca aaaaagaagc
    11161 cgaccaaccg gatttcgcca aagaccccga gggtaatacc acgcccaaag acagccatat
    11221 gcgcctggcg aatccgcgcg atcccgaatt cctcaaaaaa cactgcctct tccgccgcgc
    11281 ctacagctat tctcgcggac ccgcctcaag cggacagctt gatgtcgggc tggtgttcgt
    11341 ctgctatcag gcaaaccttg ccgacggttt catcttcgtg caaaacctcc tcaacggcga
    11401 accgctggaa gaatacatca gccccttcgg cggcggctat ttcttcgtct tgcccggcgt
    11461 gggaaaaggc ggattcttgg ggcaagggct gccgggcgta taaacctgcc tgacggacaa
    11521 atgccgtccg aaccttgcca aacgggttcg gacgggattt tactgtttgg acggtcaggc
    11581 ttttttgacg aattcggatt ttaaattcat cgcgctgccg tcgattttgc agccgatgtt
    11641 gtgatcgcct tcctgcaggc gtatgccttt gaccttcgta ccttgtttga tcgtcatcga
    11701 gctgcctttt accttgaggt ctttgatgag gatgacggtg tcgccgtttt gcagcgccgc
    11761 gccgttggca tcgcgcactt gagccgcaag gtcggcggcg gattcggttt cattccattc
    11821 gtgggcgcat tcggggcaga tgtattgtcc gccgtcttca taggtgtatt cggaggcgca
    11881 ttgcgggcaa gggggtaatg acatggtttg ccgtccttat cggatgtttg ttttgggatg
    11941 ccgtctgaaa cctgaaaccg gcttcagacg gcacggcttt attgtttgtc tttttccggc
    12001 ctcatccagc cttcgatgac ggtttggcgg gcgcgggcga gggcgagttt gttgtcttcg
    12061 atattgcggg taatcgtgct gcctgcgcct gtggttactt tgttgcccag tgttacaggg
    12121 gcaaccagta cgcagttcga accgatgcgc acttcgtcgc cgatgacggt tttgtgtttg
    12181 tgcacgccgt cgtagttggc aataatcgtg cccgcgccga agttggtttt gctgccgact
    12241 tcggcgtcgc ctatgtaggt gaggtggttg gctttggtgc ctttgccgat ggcggcgttt
    12301 ttgatttcga cgaagttgcc gacgtgtaca ttgtcagcca gtttggcttg cggacgcagg
    12361 cgggcgtacg ggccgattcg gttgttttcg ccgacttcgc agccttcgag gtgggagaag
    12421 ggggcaattt tgctgtttgc gccgattttg gcgtttttga tgacgcagtt tgcgccgatt
    12481 tcgacgttgt cgccgagttc gacttcacct tcgatgacga cgttgacgtc aatcacgaca
    12541 tcctgtccgt gtttcagacg gccccgcaaa tcgaaacgcg ccggatcgcg cagggtcacg
    12601 cctgctttga gcaattcttg cgcctgttcg gtttggaaga tgcgttcgag ttcggcgagc
    12661 tggcgtttgt tgttcacgcc ggcggcgagg tgggaggcgc gcacccggac ggggcggact
    12721 ttgatgccgt cggcaacggc tttggcgatg aggtcggtta aataatattc gccttgggca
    12781 ttgttgctgg aaaggctgtt cagccagttt tccagtttgg cgttgggcag gacgaggatg
    12841 cctgtgttga tttcgcggat ggttttttgg gtggcacttg cgtctttttc ttcgacaatg
    12901 gcggttacgc tgccgctgcc gtcgcggatg atgcgcccca agcctgccgg gtcggcgggc
    12961 acgtcggtca acagcccgac ttcgttgcct gcggcttcga gcagggtttc gagggtttca
    13021 acgtcaatta aaggaacgtc gccgtacaac accagcgtgc ggccttcgga ggcaaggtgg
    13081 ggcagggcgg ttttgacggc gtggccggtg ccgagttgtt cggtttgttc gacccagacg
    13141 gcatcgcgtt tgacagtgtc taaaacttgc tctttgccgt gtccgacgac gacgcagatg
    13201 ttttgcggat tcagcgcggc ggcggtgtcg ataacgcgct cgaccatggg cttgccgccg
    13261 atgcagtgca gcactttggg catttgggaa tacatgcgcg tgcctttgcc ggcggcgagg
    13321 atgacggtgt ttaaagtgtt ttgcggcata gcgttttcct gtgccatgcc gtctgaagcg
    13381 gtttcagacg gcatagggta ggtttatcgg ttttgaaact ttggtttttg ccagtgttgg
    13441 cgatgctctt cgtcggcgtt gttgccggtt tggtcgggca gcacggcgcg gcgttcggga
    13501 cggtattggt tgtagttcat atttttcgag tagctgccgt cttggtaata aacgggcgtg
    13561 ccggcgggat atttttgacg gacggcggtt ttgccgttgc cgtcttgata agtttcccac
    13621 gcgcagcccg acaaaaaaag ggcggcgggg gtcatcagga taaggaaggt tttacgcata
    13681 acattctttc gtattttcgg ggtttgtgcg ggtattgtaa tgattttggc ggcgttctga
    13741 caaagtttct gcataccgtg ccagttgcgc catatcgctt acggaggcat cgataaaggg
    13801 cggtgcgtgg gattttgcac cgaaccggac ggttttcatg cccaatgctt ttgcctgatg
    13861 gaggttgtcc gcgctgtcgt ccaccataat gcagcattcg ggcggtacgt ccaacaggcg
    13921 gcagacattg agatacgctt gcggattggg tttgtacagc agtccgaaat catccgtgcc
    13981 gaacagtgcg tcgaaacagt tttccaaacc gagtgcgccg gcaacggcac ggacgtaaaa
    14041 cgacgggccg ttggaaaaaa ccgccttgcg cccgttcaga cggcataggg tgttttccgt
    14101 atccgccatg ccgtgcagcc tggtcaggat tgcatcgatc ggatggcttt cgcgtaaaaa
    14161 ttccgcaatg tcgatttcgg gatggtggat ttgcagtccg gcgagcgttg cgccgtaacg
    14221 gtgccaatag tcttgacgca ggtcggacgc ggcggattcg gagagtttga ggcggcgtgc
    14281 cgtatagcgc gtcatagcgc ggttgatgag gtggaagatg cctgcgtcgg catcgtgcag
    14341 cgtgttgtcg aggtcgaaca gccacacggt cgggttttct tgcattttga accgtgaaaa
    14401 tttgttagaa tgttatttta cagcgaataa aggaagactc ggaatgaaac ggaaaatttg
    14461 gctgctgccg ctgctggcgg tttcggcata cctgcaggcg cagacggaag tcaggctggc
    14521 ggtgcataag tcgttcagcc tgcccaaagg gttgattgcg cgcttcgagc gggcaaacga
    14581 tgcgaaagtg tcgattattc aggcgggcgg cgcgaacgaa atgctcaaca aactgatttt
    14641 gagccgagcc aacccgattg ccgacgcggt gtacggtttg gacaacgcca atatcggcaa
    14701 ggcgcgggaa atgggcattt tggcggcggc gcaacccgaa tccgcccccg tcgcggtcgg
    14761 gctgccttcg gctttggcgg tcgattacgg ctatgtgtcc gtcaattacg acaaaaaatg
    14821 gtttgaaggc aaaaagctgc ccctgccgca aaccctgcag gatttgaccc gccccgaata
    14881 taaaaaccta ttggtcgtgc cgtcccccgc cacatcttcc cccggcttgg gcttcctgat
    14941 ggcgaacatc ggcggtctgg gcgaagaagg cgcgtttaaa tggtgggcac agatgcggca
    15001 gaacggcgtg aaggtcgcca aaggctggag cgaggcgtat tacaccgact tttcgcacaa
    15061 cggcggcgcg tatccgctgg tggtcggtta tgccgccagc cctgcggcgg aagtatattt
    15121 ttccaaaggc aaatacagcg agccgccgac gggcaacctg tttttaaaag gcggcgtatt
    15181 ccgtcaggtc gaaggcgcgg cggtcttgaa gggcgcgaaa cagccgaagc tggcggcaaa
    15241 actggtgcaa tggctgcaaa gtctggaagt gcagcaggcg gttccgtctg aaatgtgggt
    15301 ttaccccgcc gtcaaaaaca cgcgcctgcc cgacgtgttc cgcttcgccc aagccccggc
    15361 gcacactacc gcccccgcgc agcgcgatat tgatgcgaac cagcgcggat gggtttcccg
    15421 ttggatcagg acggttttga aataaaacaa acataccgcc ccgcagggct tcagacggca
    15481 tttttacacc tgtgccgatt acgccgcacg gggcggatgt tcgatcgaga ggaaaacaat
    15541 ggacttcaaa caatttgatt ttttacacct gatcagtgtt tccggttggg ggcatctggc
    15601 tgaaaaggcg tgggcgttcg ggctgaacct tgccgccgcg ctgcttattt tcttggtcgg
    15661 gaaatgggcg gcgaaacgca ttgtcgccgt gatgagggcg gcgatgacgc gcgcgcaggt
    15721 cgatgccacg ctgattagtt ttttgtgtaa tgttgccaat atcggcttat tgattttggt
    15781 gattattgcc gcattgggac ggttgggcgt ttccacaaca tccgtaaccg ccttaatcgg
    15841 cggcgcgggt ttggcggtgg cgttgtcctt aaaagaccag ctgtccaatt ttgccgccgg
    15901 cgcgctgatt atcctgttcc gcccgttcaa agtcggcgac tttatccgtg tcggcggttt
    15961 tgaaggatat gtccgggaaa tcaaaatggt gcagacttct ttgcggacga ccgacaacga
    16021 agaagtcgtg ctgcccaaca gcgtggtgat gggcaacagc atcgtcaacc gttccagcct
    16081 gccgctttgc cgcgcccaag tgatagtcgg cgtcgattac aactgcgatt tgaaagtggc
    16141 gaaagaggca gtgttgaaag ccgccgccga acaccccttg agcgttcaaa acgaagagcg
    16201 gcagcccgcc gcctacatca ccgccttggg cgacaatgcc atcgaaatca cattatgggc
    16261 ttgggcaaac gaagcagacc gctggacgct gcaatgcgac ttgaacgaac aagtggtcga
    16321 aaacctccgc aaagtcaata tcaacatccc gttcccgcaa cgcgacatac acatcatcaa
    16381 ttcttaaacg ccgtctgaaa ggggggtggg aaatggacgc gttgcacacc atcgcccgaa
    16441 acctgacgaa aaaacgtcaa accgtaagct gtgccgaatc ctgcacgggc ggaatgcttg
    16501 ccgccgcatt cacaagcgtt gcaggcagtt cgcaatggtt cgaccagagt tttgtaacat
    16561 acagcaacaa agccaaagaa taccgcttgg gcgtgttgcc cgaaaccctg ctcgaacacg
    16621 gcgcggtcag ccgccaaacc gtctatgaga tggcgcgcgg cgcgaaagcc gtggctcagg
    16681 cggattacgc cgtcggtatt tccggcatcg ccggcccggg cggcggcggc gaaagcaaac
    16741 ccgtcggcac ggtttggttc gggtttgcct ttccgggcgg aagttgcgaa gcaatgcgcc
    16801 gttttgacgg caaccgcgaa tccgtccgcg cgcaggcggt cgccttcgcg ttggaacggt
    16861 tggccgggct ggttgaaaac ggcggcgatg ctgtctgaac aaatccccgc cggataaaaa
    16921 atgccgtctg aaacgttgca ggtttcagac ggcattttgc cgggttaggc ggcggtgcgg
    16981 cttatttcac tttgcccttc aacgcgccgt agcctgccgc gtccatttgt tccagcggga
    17041 tgaatttcaa gctcgcgccg ttgatgcagt agcgcagtcc gcctttgtcg cgagggccgt
    17101 cggggaagac gtgtcccaag tgcgaatcgg cggcgcggct tctgacttcg gtgcggcgca
    17161 tattgaagct gaaatcatcg tgttcggtaa cggattttgc atcaatcggg cgcgtgaagc
    17221 tcggccagcc gcagccggaa tcatatttgt cggcggagct gaacaggggt tcgccgctga
    17281 caacgtccac ataaatgccg ggtttgaaca aatggtcgta ttcgtggctg aaggcgtatt
    17341 cggtcgcgct gttttgggtc acttggtatt gctcttcggt cagggtgcgt ttgagttcgg
    17401 cgtcactcgg ttttttatac gttgccgcgt cgaagccttt cccttgcggt gcggctttgg
    17461 ttttgcccgg cagcggttcg tcggctttgc ggatgtcgat gtggcagtag ccgttggggt
    17521 ttttaatcag gtagtcctga tggtattcct tggcgtcgta gaagtttttc agcggctcgt
    17581 tttcaacaac gaggggcagt tggtattttt gctgctcgcg tttgagggcg gcggcgatga
    17641 cggctttttc ggcggggtcg gtgtagtaca cgccgctgcg gtattgcgtg ccggtgtcgt
    17701 taccctgttt gttgaggctg gtcggatcaa cgacgcggaa ataatattgc aggatgtcgt
    17761 ccaggctgag tttgtcggca tcgtaggtca ctttgacggt ctcggcatgg cccgtatggc
    17821 ggtaggacac gtcttcgtag ctcgggtttt ccgtgttgcc gttggcgtag ccggataccg
    17881 cgtcaaccac gccgtcgatg cgttggaaat aggcttccaa gccccagaag cagccgccgg
    17941 cgaggtagat ggtgcgcgtg ttcatgattg ctgaatcctt tttctgagtg tcgggtttgt
    18001 agaacgaatg tttcaaactg cccaaatcgg cattcgggtt gcggattaac gccaatgcct
    18061 gcgcttcgtt gatgctgcct ttgacgatgc gctgcacgtc gccgtcttta ccgattaacg
    18121 cccaagaagg ataaacgctg atattcaggt tttgggcgat cgtgccgccg ttgtcggtaa
    18181 cgacgggcag cttggggtag ttcaaaccgg cataccattt ttgaaactcg ccgtcttttt
    18241 tctcgtgcaa aaagccgggg gaggcgacgg taatcaggtt ggcggagctg aattttgcat
    18301 cttgcgccca tttctcggcc tgtcccaatt cggacaaaca taaaggacac cagctcgccc
    18361 aaaatttaat cagcgtcggt ttgtcttttt tcaaataaac actggcgggg cggttgtccg
    18421 cggtttttaa cgtggataaa gtgtgcggca cggtcgcggc cccggcatcg acgattttgg
    18481 gcgaacaagc gcccagcgca agcaggcagc cgaacttggc gcaaagggaa aagaaagtac
    18541 ggtgtttcat tttgatgttt cctgtgtgga cggtttgcat gattagacgt ttgagatgcc
    18601 gaaaccttac ggcccggatt ttcagacaac cttgccgcgc aaaatacgct acaatacgcc
    18661 ctatttcaag tttctaaaat taaaaggaaa attcaatgtt cagcttcttc cgtcgcaaga
    18721 aaaaacagga aacgccggct ctcgaggagg cccaagttca ggaaaccgca gcaaaagtag
    18781 aatctgaagt tgctcaaata gttggaaata ttaaagaaga tgtcgaatct ttagcagaaa
    18841 gcgtcaaagg gcgggccgaa tctgccgttg aaaccgtcag cggtgcggtt gaacaggtaa
    18901 aggaaaccgt tgccgagatg ccgtctgaag caggggaagc ggcggaacgc gttgaatccg
    18961 caaaagaagc tgttgccgaa accgtcggcg aggctgtcgg gcaagttcaa gaagccgttg
    19021 cgacaactga agaacacaag ctcggttggg ctgcgcgttt gaaacaaggc ttggccaaat
    19081 cacgcgacaa aatggcgaaa tcgctggccg gcgtgttcgg cggcggacaa atcggcgagg
    19141 atttgtacga agagctggaa accgtgctga ttaccggcga tatgggcatg gaggccaccg
    19201 aatacctgat gaaagacgtg cgcgaccgcg tcagcctcaa agggctgaaa gacggcaacg
    19261 aattgcgcgg cgcgttgaaa gaagccttgt acgacctgat taagccgttg gaaaaaccgc
    19321 tggtcttgcc cgaaactaaa gagcctttcg tgattatgct tgccggtatc aacggcgcgg
    19381 gcaaaaccac gtctatcggc aaactcgcca aatatttcca agcgcagggc aaatccgtat
    19441 tgctggcggc aggcgatacc ttccgcgccg ccgcgcgcga gcagcttcag gcttggggcg
    19501 ggcgcaacaa tgtaaccgtg atttcacaaa ccacgggcga ttccgccgcc gtgtgcttcg
    19561 atgccgtcca agccgccaaa gcgcgcggga tcgacatcgt gcttgccgac accgccggcc
    19621 gcctgcccac gcagcttcat ttgatggaag aaatcaaaaa agtgaagcgc gtgctgcaaa
    19681 aagccattcc cggcgcgccg cacgaaatca tcgtcgtact cgatgccaat atcgggcaaa
    19741 acgccgtcaa ccaagtcaaa gcctttgacg acgcattggg gctgacgggg cttatcgtta
    19801 ccaaactcga cggcacggca aaaggcggca tcctcgccgc gcttgcttcc gaccgccccg
    19861 tccccgtccg ctacatcggc gtgggcgaag gcatagacga cctgcgcccg tttgacgcgc
    19921 gcgcgtttgt ggacgcactg ctggattgag ccgaaatgcc gtccgaaaac ggca
//
LOCUS       DAXFZM010000033        19488 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.033, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000033 DAXFZM010000000
VERSION     DAXFZM010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19488)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19488)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19488
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.033"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            129..1103
                     /locus_tag="ACFJAG_000995"
     CDS             129..1103
                     /locus_tag="ACFJAG_000995"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042132 - fructose 1,6-bisphosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HFC3980309.1"
                     /translation="MDTLTRFLPEHLQQNQLPEALGGVLLSVVSACTEINAKVRLGAL
                     AGVLGMAGTGNIQGEDQKKLDVIANNIMIDTLKANPAVAGLASEEEDTFVSAGENGRY
                     LVLFDPLDGSSNIDVNISVGTIFSILAKPEGALATESFLQTGRQQLAAGYVLYGPQTQ
                     LVFTFGHGVYVFTLNAENEFVLTKENPKVPESTKEFAINMSNRRHWLPPVQQYVDELL
                     AGETGTRGKNYNMRWVASMVAEIHRILMRGGVFMYLQDKRDPSKPGKLRLMYEANPMA
                     LILEQAGASASNAYQAMLDIQPESLHQRVAVIMGSSEEVDYLNRLHSK"
     gene            complement(1262..1480)
                     /locus_tag="ACFJAG_000996"
     CDS             complement(1262..1480)
                     /locus_tag="ACFJAG_000996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HFC3980310.1"
                     /translation="MFPEYRDLISKLKQENSRFARLFDEHNELDDKITGLANNPVTSG
                     AETIDELKKAKLKLKDELYAILQKAAGK"
     gene            1673..1936
                     /locus_tag="ACFJAG_000997"
     CDS             1673..1936
                     /locus_tag="ACFJAG_000997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007116440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin family protein"
                     /protein_id="HFC3980311.1"
                     /translation="MKGTPQFPQCGFSARAVEVPTQIGRPFAFVNILENPEIRSTLPL
                     IANWPTFPRLWVNGELIGGSDIILQMYQSGELKPLIEEHSPKV"
     gene            2059..3872
                     /gene="ggt"
                     /locus_tag="ACFJAG_000998"
                     /pseudo
     CDS             2059..3872
                     /gene="ggt"
                     /locus_tag="ACFJAG_000998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574051.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0036374 - glutathione hydrolase activity
                     [Evidence IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0006751 - glutathione catabolic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
     gene            3936..4100
                     /locus_tag="ACFJAG_000999"
     CDS             3936..4100
                     /locus_tag="ACFJAG_000999"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980312.1"
                     /translation="MSNQTKIQAIKQASEQILAICETPNTALQAIHLILRHGGAGRIV
                     LASGVSAGYG"
     gene            4045..4287
                     /locus_tag="ACFJAG_001000"
     CDS             4045..4287
                     /locus_tag="ACFJAG_001000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980313.1"
                     /translation="MAGQEELSWQVVYQRVMADKDVVGAGYLIDFAQTAENLPFDVLP
                     LISLVLNKGDETLKTGMLNKLPDNAKENLRIMGYLP"
     gene            4354..5604
                     /gene="glyA"
                     /locus_tag="ACFJAG_001001"
     CDS             4354..5604
                     /gene="glyA"
                     /locus_tag="ACFJAG_001001"
                     /EC_number="2.1.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004372 - glycine hydroxymethyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0070905 - serine binding [Evidence IEA];
                     GO_process: GO:0019264 - glycine biosynthetic process from
                     serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HFC3980314.1"
                     /translation="MFSKSVTLAQYDPDLAAAIAQEDRRQQDHVELIASENYVSCAVM
                     EAQGSQLTNKYAEGYPAKRYYGGCEYVDIVEQLAIDRVKELFGAAYANVQPHSGSQAN
                     QAVYASVLKPGDTILGMSLAHGGHLTHGASVNISGKLYNAVTYGLDENEVLDYAEVER
                     LALEHKPKMIVAGASAYALQIDWAKFREIADKVGAYLFVDMAHYAGLVAGGEYPNPVP
                     FCDFVTTTTHKTLRGPRGGVILCRDNTHEKALNSSIFPSLQGGPLMHVIAAKAVAFKE
                     ALQPEFKQYAKQVKINAAVMAEELVKRGLRIVSGRTESHVFLVDLQPMKITGKAAEAA
                     LGKAHITVNKNAIPNDPEKPFVTSGIRIGSAAMTTRGFNETDARVLSNLVADVLANPE
                     DEANLAKVRGQVTALCDKYPVYGN"
     gene            complement(5677..6066)
                     /locus_tag="ACFJAG_001002"
     CDS             complement(5677..6066)
                     /locus_tag="ACFJAG_001002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HFC3980315.1"
                     /translation="MEVHDKIRTLREVNQWTQEEMAEKLEMSVNGYSKIERGKSGINL
                     DKLRQIAQIFNIDVVELLAEQNRSFFFSIGDNTNNHHNIIGSDEMLVFENEKLRSLLD
                     AKDELIRQKDSEIAVLKKLVILLEEKK"
     gene            7006..7797
                     /locus_tag="ACFJAG_001003"
     CDS             7006..7797
                     /locus_tag="ACFJAG_001003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HFC3980316.1"
                     /translation="MKKALLALTIAAISGTAMAQLPDFLGKGEYTVRTDISKQTLKNA
                     DLKEKHKVQKNIGFRADMPFDDIHHGMRFEVSHSRDKKDMYVVTESTTKPFGKDVKEK
                     RTDVYAGYTYTQPLSEATKLRAGLGLGYEKYKDAVANEKGTVSTEREAFYTKAHADLT
                     SDLGGGWYLNPWAEVKVDLDAKLKHNATVAGASADINAKTRGWGVGVGANIGKQITDT
                     VGIEAGPFYKHRHFKASGSFVLDGGNIRVDPTKINEYGVRVGVKF"
     gene            7948..8592
                     /locus_tag="ACFJAG_001004"
     CDS             7948..8592
                     /locus_tag="ACFJAG_001004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HFC3980317.1"
                     /translation="MLASVIDFILHIDQHLLSLSAQYGVWIYAILFLIVFCETGLIVT
                     PFLPGDSLLFAAGGIAALGGMDIHLMVALLSLAAILGDALNFTVGKYFGGRLFANPDS
                     KIFRCEYLGKTRRFYEKHGGKTIIIARFVPIVRTFAPFVAGMGKMHYAKFIRYNIIGG
                     LLWVILFSYAGYFFANFPVVKNNLGLVMGGIIIVSVLPGIIEIARAKLAAKSER"
     gene            8611..10521
                     /locus_tag="ACFJAG_001005"
     CDS             8611..10521
                     /locus_tag="ACFJAG_001005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HFC3980318.1"
                     /translation="MNILSVENASFAVGHVALLDKTSFQLDSGEKVGLIGRNGAGKSS
                     FLKILTGVQKLDDGQIIVQNNLKIVYVPQESFFDKDATVFDTVAEGLGEIRDLLRRYH
                     HVSHELENGSSELLLKELNELQLEIEAKDGWKLDAAVKQTLGELGLPENEKIGNLSGG
                     QKKRVALAQAWVQKPDVLLLDEPTNHLDIDAIIWLENLLKAFEGSLVVITHDRRFLDN
                     IATRIVELDRGILRSYPGSFSKYSEKKAQELAVEAEHNRLFDKFHAQEEAWIRKGIEA
                     RRTRNEGRVRRLEELRRQRAERRNVQGQVNFKLDSGKKSGKIIAELEHASFAYDDKVI
                     MDKFSAILQRGDKIGLIGPNGIGKTTFLKLILGELQPTYGRIRIGSKQEVAYFDQFRS
                     ALNENDTVFYTLGQGNDYVEVGGKKKHVMSYLEDFLFPPARAQSPVSSLSGGERNRLL
                     LAKLFTRPANILVLDEPTNDLDIDTQELLEDLLRDYQGTVFLVSHDRMFLDNVITQSI
                     VFEGQGRLKEYIGGYQDYIDAKSRENKIQTASAPKASDVEPAKEKPKANRTVKLSYKE
                     QRELDALPDEIAALETEQAEINAQLSDPGIFKDYEKAGALQNRAEEIEMLLLEKLERW
                     ELLETKQNGNAV"
     gene            10543..10909
                     /locus_tag="ACFJAG_001006"
                     /pseudo
     CDS             10543..10909
                     /locus_tag="ACFJAG_001006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213667.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            11021..12496
                     /gene="trpE"
                     /locus_tag="ACFJAG_001007"
     CDS             11021..12496
                     /gene="trpE"
                     /locus_tag="ACFJAG_001007"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HFC3980319.1"
                     /translation="MISKQEYQAQAAQGYNRIPLVQELLADLDTPLSLYLKLANRPYT
                     YLLESVVGGERFGRYSFIGLPCSHYLKAGGKHVDVYQNGEIVEQYDGNPLPFIEAFHN
                     RFKTPEIPSLPRFTGGLVGYFGYETVYNFEHFAHRLKNTAKANPLGTPDILLMLSQEL
                     AVIDNLSGKIHLIVYADPSQPDSYERARERLEDIRTQLRQSCAIPLSLGSKQTQAVSE
                     FGEEPFKACVDKIKDYIFAGDCMQVVPSQRMSMEFTDNPLALYRALRTLNPSPYLFYY
                     DFGDFHIVGSSPEILVRRERDDVIVRPIAGTRLRGKTPAEDLANEQDLLSDAKEIAEH
                     VMLIDLGRNDVGRISKTGEVKVTDKMVIEKYSHVMHIVSNVEGCLKEGVTNMDILAAT
                     FPAGTLSGAPKVRAMEIIEEIEPEKRGIYGGAVGVWGFNNDMDLAIAIRTAVIKNNTL
                     FIQSGAGVVADSDPTSEWQETQNKARAVVRAAQMVQEGLDK"
     gene            12580..13518
                     /locus_tag="ACFJAG_001008"
     CDS             12580..13518
                     /locus_tag="ACFJAG_001008"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003886 - DNA
                     (cytosine-5-)-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HFC3980320.1"
                     /translation="MQFTSLEICAGAGGQALGLERAGFSHVALIEIEPSACQTLRLNR
                     PDWNVIEGDVRLFQGEGYDGIDLLAGGVPCPPFSKAGKQLGKDDERDLFPEAIRLAKE
                     TDPKAIMLENVRGLLDPKFENYRNHITEQFAKLGYLGQWKLLYAADYGVSQLRPRVLF
                     VALKNEYTNFFKWPEPNSEQPKTVGELLFDLMSENNWQGAHNWRLKAAQIAPTLVGGS
                     KKHGGADLGPTRSKRAWAELGVDGSGLWDSAPPEDFSGMPRLTVRMTARIQGFPDNWQ
                     FFGKKTPMYRQIGNAFPPPVAEAVGRQIIKALKKEN"
     gene            13519..14379
                     /locus_tag="ACFJAG_001009"
     CDS             13519..14379
                     /locus_tag="ACFJAG_001009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NgoMIV family type II restriction endonuclease"
                     /protein_id="HFC3980321.1"
                     /translation="MNPLFTQERRIFHKKLLDGNILATNNRGVVSNADGSNTRSFNIA
                     KGIADLLHSETVSERLPGQTSGNAFEAICSEFVQSAFEKLQHIRPGDWNVKQVGSRNR
                     LEIARYQQYAHLTALAKAAEENPELAAALGSDYTITPDIIVTRNLIADAEINRNEFLV
                     DENIATYASLRAGNGNMPLLHASISCKWTIRSDRAQNARSEGLNLVRNRKGRLPHIVV
                     VTAEPTPSRISSIALGTGEIDCVYHFALYELEQILQSLNYEDALDLFYIMVNGKRLKD
                     ISDLPLDLAV"
     gene            14396..15532
                     /locus_tag="ACFJAG_001010"
     CDS             14396..15532
                     /locus_tag="ACFJAG_001010"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003683536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HFC3980322.1"
                     /translation="MNTPPILPPAMLGILGGGQLGRMFAVAAKTMGYKVTVLDPDPNA
                     PAAEFADRHLCAPFDDRAALDELAKCAAVTTEFENVNADAMRSLAKHTNVSPSGDCVS
                     IAQNRIQEKARIRKAGLQTAPYQAVCKAEDITEASAQFLPGILKTATLGYDGKGQIRV
                     KTLDELKAAFAEHGGVDCVLEKMVDLRGEISVIVCRLNDENVQTFDPAENIHENGILA
                     YSIVPARLSADVQQQARQTAQRLADELDYVGVLAVEMFVVGDTHELLVNETAPRTHNS
                     GHHTIDACAADQFQQQVRIMCNLPPADTKLLSPCCMANILGDVWQEDGGEPDWLPLQS
                     RPNAHLHLYGKKTAQKGRKMGHFTVLTTDSDTAFQEAKKLHQSL"
     gene            15579..16061
                     /locus_tag="ACFJAG_001011"
     CDS             15579..16061
                     /locus_tag="ACFJAG_001011"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HFC3980323.1"
                     /translation="MSLLTLLRPATVQDCKDIFKVHLHSVQYTCILSYNEHALKVWED
                     LLNTESYLPTISDPDKALWVAEYKGNIQGFFQIDCQEAQLDALYVHPLFHNLGLGTAL
                     LRQAETIAHKSGLSFLKLYASLNSVPFYLLNRYESLGSAVLQLDPSIKIKCELMRKHL
                     "
     gene            16167..17215
                     /locus_tag="ACFJAG_001012"
                     /pseudo
     CDS             16167..17215
                     /locus_tag="ACFJAG_001012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230486.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter substrate-binding
                     protein"
     gene            17796..18401
                     /locus_tag="ACFJAG_001013"
     CDS             17796..18401
                     /locus_tag="ACFJAG_001013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Smr/MutS family protein"
                     /protein_id="HFC3980324.1"
                     /translation="MNTDFQKILKQLGKQAKKEAAEKQEAEKNKQKQEQDLDFSQAVG
                     QVSPLKNRQQYYAQSDKTPIKARPKDNRTDEENYFYIGSTYNDPPASFCKNGQGKNDI
                     QRLKNGYYPVVTDVDLHGYTQEEAQKVLNEFIAFTQKRGVCGEIIHGSGLGSKGYKPV
                     LKNMTRNWLMQHPDVLAYVEPREGNDGCVRILLKRKLRQQD"
     gene            18464..18826
                     /gene="ssrA"
                     /locus_tag="ACFJAG_001014"
     tmRNA           18464..18826
                     /gene="ssrA"
                     /locus_tag="ACFJAG_001014"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            complement(19144..19488)
                     /locus_tag="ACFJAG_001015"
                     /pseudo
     CDS             complement(19144..19488)
                     /locus_tag="ACFJAG_001015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611698.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
BASE COUNT         5445 a         5197 c         4349 g         4497 t
ORIGIN      
        1 ccgacttgcc ccgcgccgtt ttttcccact acaatcccac gcgatatccg gcggaacgca
       61 ccaaaggaac gccccgcagc aatctgccgc ctttcagacg gcacaaacct ttccgaaacg
      121 agcaaaccat ggacacactg acccgattcc tccccgaaca cctgcaacaa aaccaactgc
      181 ccgaagcact cggcggcgtt ttgctgtccg tcgtttccgc ctgtaccgaa atcaacgcca
      241 aagtccgcct cggcgcactt gccggcgtat tgggtatggc gggcacgggc aatattcagg
      301 gtgaagacca aaaaaaactg gatgttatcg ccaacaacat tatgattgac acactcaaag
      361 ccaaccctgc cgttgccggt ttggcaagcg aggaagaaga cactttcgta agtgccggtg
      421 aaaacggacg ctatctcgtc ctattcgacc ctttagacgg atcgtccaat attgatgtca
      481 acatttccgt cggtacgatt ttctccattc tcgccaaacc cgaaggcgca ttggcaaccg
      541 aatcattcct tcaaacgggc agacagcagc ttgccgcagg ctatgtcctc tacgggcctc
      601 aaacccagct cgtattcaca ttcggacacg gcgtgtacgt atttacactc aatgccgaaa
      661 acgaatttgt gctgaccaaa gaaaacccga aagtacccga aagtaccaaa gaattcgcca
      721 tcaatatgtc taaccgccgc cactggctac cccccgttca acaatacgtc gacgagctct
      781 tggcgggcga aaccggtacg cgcggcaaaa actacaatat gcgctgggta gccagtatgg
      841 ttgccgaaat ccaccgcatc ctgatgcgcg gcggcgtgtt catgtatctg caagacaaac
      901 gcgacccgtc caaacccggc aaactgcgcc tgatgtacga agccaaccct atggccctga
      961 tactcgaaca ggcgggcgca tcggcaagca acgcatatca agccatgctc gatatacagc
     1021 ccgaaagcct gcaccaacgc gtcgccgtca ttatgggcag cagcgaagaa gtggattacc
     1081 tcaaccgtct gcattcaaaa taggcagaga ccgtactgat aaagaccggc ggcagcgtga
     1141 atccgatact gcgccgatat ttcaagcata ccctccggaa aaacagaaaa ctgcctttcc
     1201 gaacgataaa aataccgtct gaaaaatttt cagacggtat tttaaaaatt aaagctcaaa
     1261 tttatttgcc cgccgctttt tgcaggatgg cgtacaactc gtctttcagt ttcaatttgg
     1321 cttttttcag ctcatcgatg gtttccgcac cgctggtaac cggattgttg gccagaccgg
     1381 taattttatc gtccagctcg ttatgctcgt cgaacagacg ggcgaagcgg gaattttcct
     1441 gtttcaattt ggaaatcaaa tcacggtatt ctgggaacat atcgctttcc tctcttggtt
     1501 tacggttaaa aagtcaaatt gaatctttac attaattata acaaagataa tatttttatc
     1561 cagtgttttg ttatacacgg caacaccgtc cgcagaaaac cgccccaccg tccgataaaa
     1621 tcgttgacaa tcttccgctt tacgcataaa ttttcagccc ttcctactgc atatgaaagg
     1681 cacgccccag tttccccaat gtggattttc agcgcgcgca gtagaggtgc cgacccaaat
     1741 tggcagaccc tttgcttttg ttaatatcct agaaaatcca gaaattcgca gtactctacc
     1801 actcatcgcc aattggccaa cctttccacg gctttgggtt aatggtgagt taatcggtgg
     1861 tagtgatatt atcctacaaa tgtaccaatc aggtgagcta aaaccactca ttgaagagca
     1921 tagcccaaag gtctgattac ttaatatctt aaaataaata tcaaaaaaga ctgctgatga
     1981 cattagcggt ctttttttga tggtcaagat tgatagtttg gattgaatta tttagccata
     2041 ttacatacaa taatcagcat gctttgtatg aattatcaat caaactcagg cgaaggagtg
     2101 cttgtagcta aaacatattt attgactgca ttgataatgt ctatggtaat ctccggatgt
     2161 caagtcatcc atgccaatca aggtaaggtt aatactaatt ctgctgtcat cgcaggtgca
     2221 gacgctcaca cgcctgaaca tgtaacggga ctgaccgaac aaaagcaggt gattgcaagt
     2281 gattttatag tagcgtcagc caatccatta gcaacacaag ctggctatga tatcttaaag
     2341 caaggcggta gcgctgcaga tgcgatggtg gcggtgcaga cgacactaag cttggtagag
     2401 ccacagtcgt caggcttggg cggtggtgca tttgtgttgt attgggacaa taccgccaaa
     2461 acattgacca catttgatgg gcgtgagacg gcaccgatgc gtgcgacgcc agaattattt
     2521 ttggataaag atggttaacc attgaaattt atggaagcgg tggtcgctcg gtaggtacgc
     2581 ctgctatccc taaactgacg gagacaatac atcagcgata cggtgtattg ccttggggaa
     2641 aattatttga tacgccgatc cacttggcaa aacaaggctt tgaggtgtcg ccaaggcttg
     2701 ccatctcggt tgagcaaaat cagcagcatt tggcacgcta tccaaaaaca gccgcttatt
     2761 ttttgccgaa tggtgtgccg ctacaagcag gcagcttgct gaaaaattta gaatttgctg
     2821 acagtgttca ggcgttagca gctcaaggtg caaaagctct gcatactggt aaatatgccc
     2881 aaaatattgt ttcagttgtc caaaatgcta aggataaccc cggtcaatta tccttgcaaa
     2941 atttatctga ttatcaagtg gtggaacgcc cgcctgtttg tgtgacttat cgtatttatg
     3001 aagtatgcgg tatgggtgca ccaagctcag gtgggattgc tgtgggtcag attttgggga
     3061 ttttaaatga attttcaccc aatcgggtgg ggtatgatgc tgaaggtttg cgtctcttgg
     3121 gcgatgcttc taggcttgcg tttgcggatc gtgatgtata tttgggcgac cctgattttg
     3181 taccagtacc cattcgccag ttgatttcta aagactacct aaaacatcgc agccagctgc
     3241 ttgagcagtc ggataaggca ttgcctagcg tatctgcagg cgattttatt catgagtggg
     3301 cgtcctcaca agcgattgag ttaccttcta ccagtcatat atcaattgtg gataaggcgg
     3361 gcaatgtgct atcaatgacg acttccattg aaaatgcgtt tggctcaact ttgatggcaa
     3421 atggctacct gctgaataat gagctgacag actttagttt tgagccaata aagcagggca
     3481 aacaggtcgc caatcgtgtc gagcctggca agagaccacg ctcctcaatg gcaccaacca
     3541 tcgtatttaa agcaggcaag ccttatatgg caatcggctc tccaggtggt agccgtatca
     3601 ttggctatgt cgctaagacg attgtggcac atagtgactg gaatatggat atccaagatg
     3661 ccatcagtgc acccaattta ttaaatcgct ttggtagcta tgaactagaa acgggtacaa
     3721 ccgccgtcca gtggcaacaa acattaaatg atttgggcta taagactgat gtgcgtgagc
     3781 taaattcagg tgttcaagcc attattatcg agccaagcag gctggttggt ggtgtcgatc
     3841 cacgccgaga aggtcgagtg acgggtgatt agaggtgaag cttgtatttt gtgaatttga
     3901 ccgcattaag ttaattatta aaataggggg aaattgtgag taatcaaaca aaaatacaag
     3961 ccatcaagca agcttctgag cagatcttgg caatttgtga gacgccaaac acagcattac
     4021 aagccattca tctgatttta agacatggcg gggcaggaag aattgtcttg gcaagtggtg
     4081 tatcagcggg ttatggctga taaagatgtg gttggtgctg gttatttgat tgattttgca
     4141 caaactgccg aaaatttacc atttgatgta ttgcctttga ttagccttgt gctaaataaa
     4201 ggtgatgaga cgctaaaaac cggcatgtta aataaattac ctgataatgc caaagaaaat
     4261 ttacgcatta tgggctatct gccttaggtt ttgaagtatt tttttatacg aaaaacgctc
     4321 atgataccct gattacacaa aggagccgag aatatgtttt caaaaagcgt taccctcgca
     4381 caatatgacc ccgatttggc agcagccatt gcccaagaag accgacgcca gcaagaccac
     4441 gtcgagctga ttgcctctga aaactacgtc agctgcgccg tgatggaggc acaaggttcg
     4501 caattgacca acaaatacgc cgaaggctat cccgcaaaac gctactacgg cggctgcgaa
     4561 tacgtcgata ttgtcgaaca attggcaatc gaccgcgtaa aagaactgtt tggcgcagcc
     4621 tatgccaacg ttcaaccgca ctccggttcc caagccaacc aagccgtata tgcttccgtt
     4681 ttaaaaccgg gcgacaccat tttgggtatg tctctggcgc acggcggaca cctgacccac
     4741 ggcgcgagcg ttaatatttc cggcaaactc tacaatgccg ttacttatgg cttggatgaa
     4801 aacgaagtcc tcgattatgc cgaagtcgaa cgcctcgcgc tcgaacacaa acccaaaatg
     4861 attgtggcgg gcgcgtctgc ctacgcgttg caaatcgact gggcaaaatt ccgcgaaatc
     4921 gccgataaag tcggcgcata cctctttgtc gacatggcgc actatgccgg actggttgcc
     4981 ggcggcgaat atcctaaccc cgtgccattc tgcgacttcg taaccactac cacccacaaa
     5041 accctacgcg gccctcgcgg cggtgtgatt ttgtgccgtg acaataccca cgaaaaagcg
     5101 ctgaactctt ccatcttccc aagcctgcaa ggcggtccgt tgatgcacgt tatcgccgcc
     5161 aaagccgtag cgtttaaaga agcgttgcaa cccgagttca aacaatacgc aaaacaagtg
     5221 aaaatcaatg ctgccgtcat ggcggaagag ttggttaaac gcggtttgcg catcgtttcc
     5281 ggccgcaccg aaagccacgt tttcctcgtc gacctgcaac cgatgaaaat caccggcaaa
     5341 gccgccgaag ccgctttggg caaagcgcac atcaccgtca acaaaaacgc catcccgaac
     5401 gatccggaaa aaccgttcgt tacctccggc atccgcatcg gttccgccgc catgaccact
     5461 cgcggcttta acgaaaccga cgctcgcgta ttgtcgaact tggttgccga tgtattggct
     5521 aatcccgaag acgaagccaa cctcgccaaa gtccgcggac aagtgactgc cttgtgcgac
     5581 aaataccccg tttacggaaa ctaaacgccc gatgtttcca tacaaaatgc cgtctgaaca
     5641 ttttccagac ggcatttttt gttttcggta acattgctat tttttctctt ccagcaaaat
     5701 gaccaacttt ttcaatactg cgatttcact atctttctgc ctgatcaatt catcctttgc
     5761 atccagcagc gacctcaatt tttcattttc aaacaccagc atttcatcag agccgataat
     5821 attatgatgg ttattggtat tgtcgccgat agagaagaaa aacgatcggt tctgctccgc
     5881 cagcagctca accacatcga tattgaaaat ctgggcaatc tggcgcagct tgtcgagatt
     5941 gataccgctt ttcccgcgtt ctattttcga atacccgtta accgacattt ccaatttttc
     6001 cgccatctct tcctgcgtcc actgattgac ttcccttaac gtccgaatct tgtcatgcac
     6061 ttccatcctg ccctccaagg ttaattttca ccactcaaac aaccgtaacc ggtatcttca
     6121 gttgatggtc ggatatttta aaaataaata atataacaca atagtatttt gataaaaatt
     6181 tacctaacga ggtacagaca tgtattcaga aaacaagcct aaacgcaccg taaaaatgaa
     6241 aaaatactgg cagcctgcac cctttccctg tccctttctg cctgtacttc gactcaagta
     6301 acttcttttg tcgagggact ctccgaggga ctcgtagatg tcagcgaagc ctttatcaca
     6361 acaaaggcag aatcatattc tgccccgtct cttcaggata agcaaatttt cataaatcgc
     6421 gtctcagaac gagcacaaaa aaattacaaa gaaagaagga aaaagaaaga agcagactta
     6481 ctaaattcag catcgtcatt aaatgaatca acatcagaag ccctatctgc ccttaaaaac
     6541 gctatcgtaa ttcctaaacg ccctaaacgc tccttgggca aaaaatataa aaacggtttt
     6601 catcctgtaa atacgtgtgc ggatgtggaa gctcggtggg caaacggagc aatgagagat
     6661 gttagggaca tagaaaggct aataagccga aacgtccctt tacgtcgtat cggagacgcc
     6721 attcaaaaca tgtgcatgga aaccaatgtg tccattagga tgtatcgcca ggagtgccgt
     6781 tcagaatcgt cagattttta tgacgaaatg cttgagcatc acgagaattt cataggatcc
     6841 tccaaatcat tcgcatcatc acttcttccc cttagcgtta caaactttac aacagacatg
     6901 gcgtgtactc ccgaatttta atctaatcac actccacaac tccctatcaa tataactgct
     6961 acttctctga gtagtatcaa ccaaccctta acaaaggact aaaaaatgaa aaaagcactg
     7021 cttgcactga ctattgccgc catctccggt actgctatgg cccagttgcc cgactttctg
     7081 ggtaaaggcg aatataccgt ccgtacagac atctccaaac aaacgctgaa aaatgccgat
     7141 ttgaaagaaa aacacaaagt acaaaaaaac atcggtttcc gtgccgatat gccgtttgac
     7201 gatattcacc acggcatgcg tttcgaagta tcacacagcc gagacaaaaa agacatgtac
     7261 gttgtgaccg aaagtactac taaaccattc ggcaaagacg ttaaagaaaa acgcaccgac
     7321 gtgtatgccg gttacaccta cacccaaccg ctcagtgaag ccaccaaact gcgtgccggt
     7381 ttaggtttgg gctatgaaaa atacaaagat gcggtagcta atgagaaagg aacagtcagc
     7441 accgagcgcg aagccttcta taccaaagcg cacgccgacc tgacttccga tttgggcggc
     7501 ggctggtatc tgaatccttg ggcagaggtt aaggttgacc tggacgccaa attgaaacac
     7561 aacgcaactg tagccggtgc ctcagccgac attaacgcaa aaacacgcgg atggggcgtg
     7621 ggcgtaggtg cgaatatcgg caaacaaatt accgataccg tcggcatcga agccggcccg
     7681 ttctacaaac accgtcactt caaagcatcc ggcagcttcg ttttggacgg cgggaacatc
     7741 cgagtcgatc ctaccaaaat caacgaatac ggtgttcgtg tcggcgtgaa attctaatcg
     7801 cggcgatatg ccccagacac aaaaccgcaa gccttttggt ttgcggtttt tgatgttgta
     7861 gcagacccta ataccgtctg aaacttttca gacggcattt ttccaatcgg ttaaaatacc
     7921 gcctcgacat tgtgttttgg aaaacccgtg cttgcttctg tgattgattt tatcctgcat
     7981 atcgaccaac acctgctcag cctgtcggcg caatacggtg tgtggattta tgcgattctg
     8041 tttttgattg ttttttgcga aaccggtctg attgttacgc ccttcctgcc cggcgattcg
     8101 ctcttgtttg ccgccggcgg gattgccgcg ctgggcggta tggatattca tttgatggtt
     8161 gcattattaa gccttgccgc catactcggc gacgcgctca attttaccgt cggcaaatat
     8221 ttcggcggca ggctgttcgc caaccccgat tctaaaatct tccggtgcga atacctcggc
     8281 aaaacccgcc gtttttacga aaaacacggc ggcaaaacga ttatcatcgc gcgcttcgtg
     8341 cccatcgtcc gcaccttcgc ccccttcgtc gccggtatgg gaaaaatgca ctatgccaaa
     8401 tttatccgct acaacatcat cggcggcttg ttgtgggtta tcttgttttc ttacgcgggc
     8461 tatttctttg ccaacttccc cgtcgtaaaa aacaatctgg gcttggtgat gggcggcatc
     8521 attattgttt ccgtcctgcc cggcatcatc gaaatcgccc gcgccaaact tgcggcaaaa
     8581 tccgaacgtt aattgttgga aattgacatt atgaatatat tatccgtaga aaacgcttcc
     8641 tttgccgtcg gacatgtcgc cctgctcgac aaaacgtcct tccaactcga cagcggcgaa
     8701 aaagtcggct tgatcggacg caacggcgca ggcaagtctt cgtttttaaa aatcctcacc
     8761 ggcgtgcaaa aactcgacga cgggcagatt attgttcaaa acaatctcaa aatcgtttat
     8821 gtgccgcagg agtccttttt tgataaggac gcaaccgtat ttgatactgt tgccgaaggt
     8881 ttgggcgaaa ttcgcgattt attgcgccgt tatcatcatg tcagccatga gttggaaaat
     8941 ggttcgagtg agctcttatt gaaagagctt aacgaattgc aacttgaaat cgaagcgaag
     9001 gacggttgga aactggatgc ggcagtcaag cagactttgg gggaactcgg tttgccggaa
     9061 aacgaaaaaa tcggcaacct ttccggcggt cagaaaaaac gcgtcgcctt agcgcaggct
     9121 tgggtacaga agcccgatgt attgttactg gacgaaccga ccaaccattt ggatatcgac
     9181 gcgattattt ggttggaaaa cctgctcaaa gcgtttgaag gcagcttggt cgtgattacc
     9241 cacgaccgcc gttttttgga caatatcgcc acgcgcattg tcgaactcga tcgcggtatt
     9301 ttgcgctcct atcccggctc gttctccaaa tacagcgaga aaaaagcgca agagttggcg
     9361 gttgaagccg aacacaaccg cctcttcgac aaattccacg cgcaggaaga ggcgtggata
     9421 cgcaaaggca tcgaagcgcg ccgtacccgc aacgaaggcc gcgtgcgccg tttggaagaa
     9481 ctgcgccgcc agcgtgccga acgccgcaat gtacaaggac aggtcaactt caaactcgac
     9541 agcggcaaga aaagcggcaa aatcatcgcc gaactggaac acgcttcgtt tgcctatgac
     9601 gacaaagtta tcatggataa attttccgcc atcttgcagc gcggcgacaa aatcggctta
     9661 atcggcccaa acggtatcgg caaaaccacc ttccttaagc tgattttggg cgaattgcag
     9721 ccgacctacg gcagaatccg tatcggcagc aagcaggaag tcgcctattt cgaccagttc
     9781 cgcagcgcct tgaatgaaaa cgatactgtg ttttacacgc tcggacaggg caacgattac
     9841 gtcgaagtcg gcggcaagaa aaagcatgtg atgagctatt tggaagattt cctgttcccc
     9901 cctgcccgcg cgcaaagtcc tgtttcttca ctctccggcg gcgaacgcaa ccgccttttg
     9961 ctggcaaaac tctttactcg tcccgccaat attttggttt tggacgaacc gaccaacgac
    10021 ttggacatcg acacccaaga attgcttgaa gatctgttgc gcgattacca aggcacggtc
    10081 ttcctcgtct cgcacgaccg tatgttcctc gacaatgtaa ttacccaaag cattgttttc
    10141 gaaggacaag gccgtctgaa agaatacatc ggcggctatc aggactatat cgacgcaaaa
    10201 tcgcgggaaa ataaaattca gacggcatcc gcacccaaag catccgatgt cgaacccgcc
    10261 aaagaaaaac ccaaagccaa ccgtacggtc aaactttcct acaaagaaca gcgcgaactc
    10321 gacgccctgc ccgacgaaat cgccgccttg gaaaccgaac aggcagaaat caacgcgcag
    10381 ctttccgatc ccggaatttt caaagattac gaaaaagcag gagcattgca aaaccgcgcc
    10441 gaagaaatcg aaatgctgct tttggaaaag ctggaacgct gggagctgct ggaaaccaaa
    10501 cagaacggca atgccgtctg aaatcaaaca ggaagaaaaa aaatgttcaa acgacctgaa
    10561 gaaatcatcg tcctgatact tgccgtcctc tggattgccg gtacgtattt tctcgccgcc
    10621 ctgtttggag cggatgctta taccgtgtta aaaatcactg cccttaccct gctttggtct
    10681 gccgcatcat tcctcctttg gcaaaaaaaa cctcagccgg catatctggc cgctgctgct
    10741 cggctgcctg actgcctgtt ggtggccgta tctgaatcaa tcggtcgcac ccggttcttt
    10801 accttggcat gcatcatgga cgttcaaaac catcttagcc ctgattcccg caaccgcagg
    10861 ttatctgttt aaatggaaac aataccggca gcgcaaaaca aagccgtaag cccgtctttt
    10921 ttcagacgcc atctccggtc agactgtcaa caattccgat aaaatgttat actcgcgccc
    10981 gttgccgcgc cgtccgaaac cgccttttgg gaaagcagaa atgatcagca aacaagaata
    11041 ccaagcccaa gccgcccaag gctacaaccg catcccgctc gtgcaagaac tccttgccga
    11101 cttggatacg ccgctttccc tctatctcaa actcgccaac cgcccctata cctacctgct
    11161 cgaatccgtt gtcggcggcg aacgtttcgg ccgctattcc tttatcggcc tgccttgcag
    11221 ccactatctc aaagccggcg gcaaacacgt cgatgtttat caaaacggcg aaatcgtcga
    11281 acaatacgac ggcaatccgc taccctttat cgaagctttc cacaaccgtt tcaaaacacc
    11341 cgaaatccca agcctgccgc gctttaccgg cggcttggtc ggctacttcg gttacgaaac
    11401 cgtctacaat ttcgaacact tcgcccaccg cctgaaaaac accgccaaag ccaacccgct
    11461 cggcacgccc gatattttgc tgatgctgtc gcaagagttg gcggtaatcg acaatttgag
    11521 cggcaaaatc cacctcatcg tttatgctga tccctcgcag cccgacagct acgaacgcgc
    11581 ccgcgaacgc ctcgaagaca tccgcaccca gttgcgccaa agctgcgcca tcccactttc
    11641 cctcggcagc aaacaaaccc aagcagtcag cgagttcggc gaagaacctt tcaaagcctg
    11701 cgtcgataaa atcaaagact acattttcgc aggcgactgt atgcaggtcg tccccagcca
    11761 acgcatgagc atggaattta ccgacaatcc gcttgccctc taccgcgccc tgcgcacgct
    11821 caacccttcg ccttacctct tttactacga tttcggcgat ttccacatcg tcggttcctc
    11881 gcccgaaatc ctcgtccgcc gcgaacgcga cgacgtcatc gtccgcccca tcgccggcac
    11941 gcgcctgcgc ggcaaaaccc ccgccgaaga ccttgccaac gaacaagatt tgttaagcga
    12001 cgccaaagaa atcgccgaac acgttatgct tatcgatttg gggcgcaacg atgtcggacg
    12061 catcagcaaa acaggcgaag tcaaagtcac cgacaaaatg gtgattgaaa aatactccca
    12121 tgtgatgcac atcgtttcca acgtcgaagg ctgtctgaaa gagggcgtta ccaatatgga
    12181 catcctcgcc gccaccttcc ctgccggcac actctccggc gcgccaaaag tccgcgcgat
    12241 ggaaatcatc gaagaaatcg aaccggagaa acgcggcatc tacggcggcg ccgtcggcgt
    12301 atggggcttc aacaacgata tggatttggc aatcgccatc cgcaccgccg tgattaaaaa
    12361 caataccctc ttcatccaaa gcggcgcggg cgtggttgcc gactccgacc caacttccga
    12421 atggcaggaa actcaaaaca aagcccgcgc agtggttcgg gcggcgcaga tggtgcagga
    12481 agggttggat aaataaattt cagacaacct tcgcagatga aaagaaggtc gtctgaaaat
    12541 cacaaaacaa catcagagat acttacataa aaaatcacaa tgcaattcac atcattagaa
    12601 atttgtgccg gagcaggcgg acaggctttg ggcttagaaa gggcaggctt ttcccatgtt
    12661 gcgttaatcg aaatcgaacc gtcggcttgt caaaccctac gtttaaaccg tcctgattgg
    12721 aacgttattg aaggagatgt ccgcttgttt cagggcgaag gatatgacgg tattgattta
    12781 ttggccggcg gcgtgccttg ccctcctttt tccaaagctg gaaaacaact gggaaaagat
    12841 gatgaacgcg atttattccc tgaggctatt cgtctagcta aggaaactga ccctaaagcc
    12901 atcatgttag aaaatgtgcg ggggttactt gacccaaaat ttgaaaatta tcgcaaccat
    12961 attacagaac aatttgccaa gttgggttac cttggacaat ggaaactact ttatgctgcc
    13021 gattacggag tatcgcaact cagacccagg gttttatttg ttgcgttgaa aaacgaatac
    13081 accaattttt tcaaatggcc tgaaccaaat tcggaacaac cgaaaaccgt tggagaactg
    13141 ctttttgact taatgtcaga aaataactgg cagggggcgc ataactggcg tttgaaggcc
    13201 gcgcagattg caccgacctt ggtcggcggt tcaaaaaaac acggcggtgc tgacttgggg
    13261 cctacacgat ccaaacgcgc atgggcggag ttgggtgtgg atggttcagg tttgtgggat
    13321 agtgcgccgc ctgaagactt ttcgggaatg cctagattga ctgtccgaat gacggcgcgt
    13381 atccaaggat ttcctgataa ctggcaattt tttggtaaaa aaacgcctat gtaccgccaa
    13441 atcggcaacg cttttccccc gccggtagcc gaagcggtgg gcaggcagat tatcaaagcc
    13501 ttaaaaaagg aaaattgaat gaatccgctt tttacccaag aacgcaggat tttccataag
    13561 aaattattgg atggcaatat tcttgcaacc aacaatagag gcgtagtcag caatgcggat
    13621 gggagcaata cccgaagttt caatatagcc aaggggattg ccgacttact gcattcggaa
    13681 acggtttcgg aaagattacc cggtcagaca tcgggaaatg cttttgaagc aatatgcagt
    13741 gagtttgtcc aatctgcttt tgagaaattg cagcatatca gacccggcga ctggaatgtt
    13801 aagcaggtcg gttctcgcaa ccgtctggaa atcgcacgtt atcagcaata cgcacatctg
    13861 acagccttag ccaaggctgc cgaagaaaac cccgaattgg ctgccgcctt gggcagtgat
    13921 tacaccatta ctcccgatat tatcgttacc agaaatttga ttgcagatgc agaaatcaac
    13981 cgtaatgaat ttttagttga tgaaaatatt gccacatatg ccagtttgcg tgcgggtaat
    14041 ggcaatatgc cgctgctcca cgccagtatc tcttgtaaat ggacgattcg cagcgacagg
    14101 gctcaaaatg cccgttctga aggattgaat ttggttagaa acagaaaagg cagactgccg
    14161 cacattgttg tcgtaacggc agaaccaacg ccaagccgca tttcatctat tgccttgggt
    14221 acaggggaaa tagattgcgt ttaccatttt gccttatatg agctggaaca aattttacaa
    14281 tcattgaatt atgaagacgc tttggatttg ttttacatca tggtcaatgg taaacgatta
    14341 aaagatattt ccgaccttcc cttagatttg gcagtttaaa cagaattatt ccactatgaa
    14401 cacacccccc atccttcctc ccgccatgct cggcatcctc ggcggcggac aattaggcag
    14461 aatgtttgcc gttgccgcta aaaccatggg ctacaaagta accgttctcg atcccgaccc
    14521 gaatgcgccg gcggcggaat ttgccgaccg ccatttgtgc gcgccgtttg acgaccgggc
    14581 cgcgttggac gaattggcaa aatgcgcggc ggttacgacc gaatttgaaa acgtcaatgc
    14641 cgacgcgatg cgctctctgg caaagcatac caacgtttcc cccagcggcg actgcgtgtc
    14701 cattgcacaa aaccgcattc aggaaaaagc gcggatacgc aaagcaggct tgcaaaccgc
    14761 gccgtatcag gcggtttgca aggccgaaga cattactgaa gcaagcgcgc aatttttgcc
    14821 cggcatcctg aaaacggcta cgttgggcta cgacggcaaa ggtcaaatcc gcgtcaaaac
    14881 gttggacgaa ctcaaagccg cgtttgccga acacggcggc gtggattgcg ttttggaaaa
    14941 aatggtggac ttgcgcggcg agatttccgt gatcgtatgc cgtctgaacg atgaaaacgt
    15001 gcaaaccttc gaccccgccg aaaacatcca cgaaaacggc atcttggctt attccatcgt
    15061 ccccgcgcgg ctgagtgccg acgtgcagca acaggcgcgg cagacggcgc aacgcttggc
    15121 ggacgaattg gattatgtcg gcgtattggc ggtagaaatg tttgttgtcg gcgacacaca
    15181 tgaattgctc gtcaatgaaa ccgccccgcg cacgcacaat tccggccacc atacgataga
    15241 tgcctgcgcc gcagaccagt tccaacagca ggtacgcatt atgtgcaacc tgccgcccgc
    15301 cgacaccaaa ttattatccc cttgctgtat ggcgaatatt ttgggcgacg tttggcagga
    15361 agatggcggc gaaccggatt ggctgccgtt gcaaagccgg ccgaatgcac acctgcacct
    15421 atacggaaaa aaaaccgcac agaaaggtcg gaaaatggga cactttaccg ttttgaccac
    15481 cgattcggac accgcatttc aagaagcaaa aaaactgcat cagtccctat aatccgacca
    15541 acggcacaga tgccgtctga agccgccgac ataccgccat gagcctgctg acactgttac
    15601 gccccgccac cgtgcaagac tgcaaagaca tcttcaaagt ccacctgcac tccgtccaat
    15661 acacctgcat cctcagctac aacgaacacg ccctaaaagt atgggaagac ttgttaaaca
    15721 cagaaagcta cctgccgacc atttccgatc ccgacaaagc actttgggtt gccgaataca
    15781 aaggcaacat acagggattt ttccaaatcg actgccaaga agcacaactc gatgcgcttt
    15841 acgtccaccc cctgttccac aatctcggac tgggcactgc cctgctccgt caggcagaaa
    15901 ccatcgccca caaatccggt ttgagctttc tgaaactcta cgcatctctc aactccgtcc
    15961 cgttttacct tctcaaccgc tacgaatcgc tcggttcggc agtattgcag cttgacccca
    16021 gcatcaaaat caaatgcgaa ctgatgcgca aacacctcta atcccgcctt ataaccaaaa
    16081 ctgataatct tcaaatcaaa cattatttcc acaagcgcag acagccgtat aaagttgccc
    16141 catctaccaa ccgacaggac aagcatatga aaacctacgc acaggcactc tataccgcag
    16201 ccctgcttac cgcctgcagc cccgcagccg attcaaacca tccgtccgga caaaatgccc
    16261 cggccaatac cgaatccgac ggaaaaaaca ttaccctgct caatgcctca tacgatgtgg
    16321 cacggtattt ttacaaagaa tacaaccact tatttatcaa agcataccaa tccgaacacc
    16381 ccggcacatc cgtcagcatc caacaatccc acggcggctt cagcaaacag gcattatccg
    16441 tagccaacgg ccttcaagcc gatgtcgtaa ccatgaacca atcttccgac atcgacctgc
    16501 tcgaaaaaaa ggactggtag aaaaaggctg gcaacaagcc ctccccgatc acgccgcacc
    16561 ctacaccagc actatggttt tccttgtccg aaaaaacaac cccaaacaga tccgcgattg
    16621 gaacgacctt gccaaagacg gcgttaacat cgtcatcgcc aagacctcgg gcaacggaca
    16681 ctacgccttc ctcggcgcat acggttacgg tctgaaagcc aacaacggca acgagcagga
    16741 agcccaaaaa ctcgtcgcat ccatcctcaa aaacacaccc gtttttgaaa acggcggacg
    16801 cgccgccgcc accaccttca cacaacgcaa catcggcgac gtactcatca cttttgaaaa
    16861 cgaagccaac tacgtcagca aaaaactgac ccaaggacag tttgaaatcg tctatccgag
    16921 ctacaccatt tccgccgaaa gccctgttgc cgtcgtcaac agcgtcgtcg cgaaaaaagg
    16981 cacgcaaaaa accgcccgcg cctatctcga atacctttgg agcgaaccgg cgcaagaact
    17041 cgccgcctca ctctacctgc gtccccgcaa ccccgaagta ttggcacgac acaaagccga
    17101 cttccccgac ttagacacct tccctcccga agaaaaattc ggcggatggg acaacatcat
    17161 gaaaacctac ttcgccgacg gcggcgtatt cgaccgcctg accgcacaaa aatgaccatt
    17221 atgccgtctg aaccgccttt cagacggcat ttcacacatc aaaacagaaa accgcaccca
    17281 aaatcatcat cacaagacac aacggcaaac cggatacaaa acccaacacc gccgccaaaa
    17341 tgccgtctga agccgtcggc gcaaccatcc ttatctgggg cgcgcctcat caaaggggcg
    17401 cataactttc cttaaccatc ccttttgaca gccaaataaa cagtgctttt gcctgtcaga
    17461 aacaaaacca atattttgcg gttcgtatcg gaacatttat aaaacatcag atttccgtgt
    17521 ttcgcgtttc cggcaattca agattagcaa aaccattaac ctgcttcgca aggcaggttt
    17581 ttaaaacttt atcaggcgtt cgagcatatc ggttcgaccg acccgcattt ccggcaatca
    17641 acactgccga cggttgccgc atttcttttt gatatacaat cacactttca aaaaacatac
    17701 gacggcaaca aaatcatcct ccccccgctt ggcaaacatt ccggcaaatt aaaaccccgc
    17761 ccgaaacagc catcggacaa ataacaggaa aaaatatgaa taccgacttc caaaagatcc
    17821 tcaaacaact gggcaaacag gccaaaaaag aagcggcaga aaaacaggaa gccgaaaaaa
    17881 acaagcaaaa acaagaacag gatttggatt tttcacaagc agtcggacaa gtctccccat
    17941 taaaaaaccg gcagcaatat tatgcgcagt ccgacaaaac ccccatcaaa gcccgtccca
    18001 aagacaaccg caccgacgaa gaaaactact tctacatagg cagcacatac aacgacccac
    18061 ccgccagctt ctgcaaaaac ggacagggaa aaaacgacat ccaacgcctg aaaaacggat
    18121 actatcccgt cgttaccgat gtcgacctgc acggctacac ccaagaagaa gcacaaaaag
    18181 tcctcaacga attcatcgca ttcacccaaa aacgcggcgt atgcggcgaa atcatccacg
    18241 gcagcggatt aggttccaaa ggctacaaac ccgttctgaa aaacatgacc cgaaactggc
    18301 tgatgcaaca ccccgacgta ctcgcctacg tcgaaccccg ggaaggcaac gacggctgcg
    18361 tccgcatcct gctcaaacgc aaattaaggc agcaagactg acaaatttct ccgacagact
    18421 tggcagcacc gcacaatatc cgtataattt gcaaaccatt tctgggggcg accttggttt
    18481 cgacgggggt tgcgaagcag atgcgggcat accggggtct cagattcccg taaaacactg
    18541 aattcaaata gtcgcaaacg acgaaactta cgctttagcc gcttaaggct agccgttgca
    18601 gcagtcggtc aatgggctgt gtggcgaaag ccaccgcaac gtcatcttac attgactggt
    18661 ttccagccgg gttacttggc aggaaataag acttaaggta actggtttcc aaaaggcctg
    18721 ttggtcggca tgatggaaat aagattttca aatagacaca actaagtatg tagaacgctt
    18781 tgtagaggac tttcggacgg gggttcgatt ccccccgcct ccaccatgcc ctattttcag
    18841 cagtatcctg caacacaaaa aatccttgaa cttcaaaagt ttcaaggctt ttttattgcc
    18901 ttgaatatga tggcgtatgc ttgagttttc gcaatttatg gggtaacttt tggggtaact
    18961 tttcaggaat caccctaaaa aatatcttaa aaatacaaaa gccatcacgc attttttaaa
    19021 aaggttaccc aaaacttaaa tgaagccttt atttataagg cttgcagctt tccaaacaag
    19081 ttacccccaa acggataaaa aatgccgaag ctgaactgca ccccaaaaag tcggacagtt
    19141 taatcaagcg gctttcaggg actgaattct gtactgaaca gggctcagtc cttttaattt
    19201 caacttgatt ctatcgttgt tgtagtaacg gatatattcg tgcagtgccg cttccgattc
    19261 ggtaacggaa tcatatttgc acgtatggaa acattccgat ttcaacgttc cgaagaaact
    19321 ttccattgcc gcattgtcca agcagtttcc cttgcgggac agactctgaa ccagaccgtt
    19381 gcctttcaac tgcttttgat aaaaaacatc tgatattgcc aaccttgatc cgaatgcagc
    19441 atcggctttt cagacggccc cggtttctcc ggcgcacctt tcagtatc
//
LOCUS       DAXFZM010000034        19245 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.034, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000034 DAXFZM010000000
VERSION     DAXFZM010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19245)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19245)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19245
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.034"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..217
                     /locus_tag="ACFJAG_001016"
     CDS             <1..217
                     /locus_tag="ACFJAG_001016"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980325.1"
                     /translation="KSVEYASVQNAANRLYRLADILSTTRAKIYPQKGGRNPQAIGQS
                     SCKVSILIDKSGKLECNSRFNYLPILF"
     gene            226..360
                     /gene="rpmH"
                     /locus_tag="ACFJAG_001017"
     CDS             226..360
                     /gene="rpmH"
                     /locus_tag="ACFJAG_001017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003816025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HFC3980326.1"
                     /translation="MKRTYQPSVTKRKRTHGFLVRSKTRGGRAVLAARRAKGRKRLAV
                     "
     gene            363..728
                     /gene="rnpA"
                     /locus_tag="ACFJAG_001018"
     CDS             363..728
                     /gene="rnpA"
                     /locus_tag="ACFJAG_001018"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0004526 - ribonuclease P activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HFC3980327.1"
                     /translation="MDYRFGRQYRLLKTDDFSSVFAFRNRRSRDLLQVSRSNGNGLDH
                     PRIGLVVGKKTAKRANERNYMKRVIRDWFRLNKNRLPPQDFVVRVRRKFDRATAKQAR
                     AELAQLMFGNPATGCGKQV"
     gene            793..1014
                     /gene="yidD"
                     /locus_tag="ACFJAG_001019"
     CDS             793..1014
                     /gene="yidD"
                     /locus_tag="ACFJAG_001019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HFC3980328.1"
                     /translation="MNFLLSKLLLGLIRFYQYCISPLIPPRCRYTPTCSQYAVEAVKK
                     YGAFKGLRLAIKRIARCHPFGGHGHDPVP"
     gene            1187..2824
                     /gene="yidC"
                     /locus_tag="ACFJAG_001020"
     CDS             1187..2824
                     /gene="yidC"
                     /locus_tag="ACFJAG_001020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0032977 - membrane insertase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HFC3980329.1"
                     /translation="MDFKRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQAAQKQAATA
                     SAEAALAPATPITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFVLFGDGKEYT
                     YVAQSELLDAQGNNILKGIGFSAPKKQYTLNGDTVEVRLSAPETNGLKIDKVYTFTKD
                     SYLVNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKV
                     SFSDLDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCHIDI
                     KRRSDKLYSASVSVPLAAIQAGAKAETAVNLYAGPQTTSVIANIADNLQLAKDYGKVH
                     WFASPLFWLLNQLHNIIGNWGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQT
                     IKEKYGDDRMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAP
                     WLGWITDLSRADPYYILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMPLVFSVMFFFF
                     PAGLVLYWVVNNLLTIAQQWHINRSIEKQRAQGEVVS"
     gene            complement(2905..3615)
                     /locus_tag="ACFJAG_001021"
     CDS             complement(2905..3615)
                     /locus_tag="ACFJAG_001021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HFC3980330.1"
                     /translation="MSPVLYLIPTPLGTPDTPCLLQHEQRAVVGLTDFVVEAEKTARA
                     HLKHLGITTPIRELNLQTLNEHTDLKTLPELLKPLQEGRSMGIVSEAGCPAVADPGAN
                     LVALAHKHGFEVRPLVGPSSLLLALMASGANGQNFAFNGYLPSEKNERIQSLNALEQR
                     SRQCGETQIFIETPYRNDALLADAVENLHPETRLCTATDLTLPTQLVVSKTVADWRRM
                     KEMPNLKKRPTIFVMYAG"
     gene            complement(3677..4267)
                     /locus_tag="ACFJAG_001022"
     CDS             complement(3677..4267)
                     /locus_tag="ACFJAG_001022"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA];
                     GO_process: GO:0009117 - nucleotide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphatase"
                     /protein_id="HFC3980331.1"
                     /translation="MGLELPLVLGTSSVFRREQMERLGIAFQAASPDFDETPMLGESA
                     PQTALRLAEGKARSLTGRFPGALIVGADQVAWCDGRQWGKPMNLANAQKMLMHLSGRE
                     IEFYSAVVLLNTVTGRMHRHIDKTVVVMRQLDELHILRYLEREPDAVYCSCAAKSEGL
                     GALLIERIESTDPNALIGLPVFRLVDFLKNEGVDVL"
     gene            4415..4915
                     /locus_tag="ACFJAG_001023"
     CDS             4415..4915
                     /locus_tag="ACFJAG_001023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003776445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF177 domain-containing protein"
                     /protein_id="HFC3980332.1"
                     /translation="MSDPNLIDPEIFAAERQNLQGSFLLEELDERVSLHDYPADRRTK
                     ISFTLTGGRDRLQRLFLDLNVKADMPLICQRCIKPMPFMLDESSRIVLFSDEESLDES
                     MLADEELEGILIEKELDVRALVEDQILMSLPFSPRHGHCGNTLPESANQDKPNPFAVL
                     AGLKSS"
     gene            4949..5128
                     /gene="rpmF"
                     /locus_tag="ACFJAG_001024"
     CDS             4949..5128
                     /gene="rpmF"
                     /locus_tag="ACFJAG_001024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011765354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HFC3980333.1"
                     /translation="MAVQQNKKSPSKRGMHRSHDALTAPALFVDSTTGEVHRPHHISP
                     NGMYRGRKVVKAKGE"
     gene            5303..5830
                     /locus_tag="ACFJAG_001025"
     CDS             5303..5830
                     /locus_tag="ACFJAG_001025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase"
                     /protein_id="HFC3980334.1"
                     /translation="MKQKIWYTYDDIHRVIKALAEKIRNAGVKYDAMIAIGGGGFIPA
                     RMLRCFLEIPIYAVTTAYYDSDNEGQVTEEVKKVQWLDPVPEVLRGKNVLVVDEVDDS
                     RVTMEFCLKELLKEDFDTVGVAVLHEKIKAKAGKIPEGIPYFSGITVEDWWINYPWDA
                     LDIDEHNRLAEAGRG"
     gene            5920..6966
                     /gene="plsX"
                     /locus_tag="ACFJAG_001026"
     CDS             5920..6966
                     /gene="plsX"
                     /locus_tag="ACFJAG_001026"
                     /EC_number="2.3.1.274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043811 - phosphate:acyl-[acyl carrier
                     protein] acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HFC3980335.1"
                     /translation="MITLAVDAMGGDQGLAVTVPGATAFLQAHPDVRLIMTGDETQLR
                     QALNAAGAPMERIDICHTTQVVGMDESPQSALKNKKYSSMRVAINQVKEGKAQAAVSA
                     GNTGALMATARFVLKTIPGIERPAIAKFLPSDTDHVTLALDLGANVDCTPEQLAQFAV
                     IGSELVHALHPQKGQPRVGLVNVGTEDIKGTDTVKQTYKLLQNSKLNFIGNIESNGIL
                     YGEADVVVADGFVGNVMLKTIEGAVKFMSGAIRREFQSNLFNKLAAVAALPALKGLKN
                     KLDPRKFNGAILLGLRGIVIKSHGGTDKTGFRYALEEAYHEAKSAGLSKIEQGVAEQL
                     AALEAAQNETAASL"
     gene            7104..7355
                     /locus_tag="ACFJAG_001027"
     CDS             7104..7355
                     /locus_tag="ACFJAG_001027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MafI family immunity protein"
                     /protein_id="HFC3980336.1"
                     /translation="MKTLEKRMKALDKRMMKFGKSLEGRLDARLIESALDYIHYSERF
                     LAFDILCTYIEDFDIRLTEQESREISFINKEFEIESTSD"
     gene            7382..7600
                     /locus_tag="ACFJAG_001028"
                     /pseudo
     CDS             7382..7600
                     /locus_tag="ACFJAG_001028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218360.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            7751..7942
                     /locus_tag="ACFJAG_001029"
                     /pseudo
     CDS             7751..7942
                     /locus_tag="ACFJAG_001029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574240.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            7972..8175
                     /locus_tag="ACFJAG_001030"
     CDS             7972..8175
                     /locus_tag="ACFJAG_001030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980337.1"
                     /translation="MPSEAAWAFRRHFLRLKQRIGNPAPPVHGNPHLKTICMPNHTPI
                     PVSVICTLPVLGNHRFFAYNSRI"
     gene            8202..9164
                     /locus_tag="ACFJAG_001031"
     CDS             8202..9164
                     /locus_tag="ACFJAG_001031"
                     /EC_number="2.3.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0033818 -
                     beta-ketoacyl-acyl-carrier-protein synthase III activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HFC3980338.1"
                     /translation="MQYAKISGTGSYLPANRVSNDDLAQKVDTSDEWITARTGIKFRH
                     IAAENEKTSDLAAEAARRALADAKLNINDIDLIIVATATPDMQFPSTATIVQQKLGIT
                     NGCPAFDVQAVCAGFMYALTTANAYIKSGMAKNALVIGAETFSRIVDWNDRTTCVLFG
                     DGAGAVVLSASDKPGIIHSKLKADGNYLKLLNVPGQIACGKVSGSPYISMDGPGVFKF
                     AVKMLSKIADDVIEEAGYTAEQIDWIVPHQANRRIIESTAKHLGLSMDKVVLTVQDHG
                     NTSAASIPLALDAGIRSGQIKRGQNLLLEGIGGGFAWGAVLLQY"
     gene            9211..9582
                     /locus_tag="ACFJAG_001032"
     CDS             9211..9582
                     /locus_tag="ACFJAG_001032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1294 domain-containing protein"
                     /protein_id="HFC3980339.1"
                     /translation="MKRQAFFKPMACAAFLSAVSLRLPVLGACYAILSLYAFALYGID
                     KRRAVRGKRRIPEHRLLLPALFGGWTGAYLGSRMFRHKTAKKRFVVLFRLTVSGNVLA
                     TCILIDYFVPPELFVKLGQHL"
     gene            9608..10534
                     /gene="fabD"
                     /locus_tag="ACFJAG_001033"
     CDS             9608..10534
                     /gene="fabD"
                     /locus_tag="ACFJAG_001033"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004314 - [acyl-carrier-protein]
                     S-malonyltransferase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HFC3980340.1"
                     /translation="MSFAFFFPGQGSQSLGMMNGFAEHAIVKNTFDEASAILGQDLWA
                     MINGSDAEIIGQTVNTQPIMLAAGVAVYRAYLEVGGKTPAAVAGHSLGEYTALVAAEA
                     LDFADAVKLVRLRAELMQSAVPQGVGAMAAILGLEDEQVRQICAESAQGEVVEAVNFN
                     SPGQVVIAGNAAAVGRAMAAAKEAGAKRALPLPVSVPSHCSLMKPAADKLAEALKTVE
                     IKQPQIRVIHNADVAAYDDAGKIKDALVRQLYSPVRWTETVNALVSDGIAESAECGPG
                     KVLAGLAKRINKAAACSALTDAGQITAFIEAH"
     gene            10673..12541
                     /gene="msbA"
                     /locus_tag="ACFJAG_001034"
     CDS             10673..12541
                     /gene="msbA"
                     /locus_tag="ACFJAG_001034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005319 - lipid transporter activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006869 - lipid transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A export permease/ATP-binding protein
                     MsbA"
                     /protein_id="HFC3980341.1"
                     /translation="MIEKLTFGLFKKEDARSFMRLMAYVRPYKIRIVAALIAIFGVAA
                     TESYLAAFIAPLINHGFSAPAAPPDLSAAAGILSTLQNWREQFTYMVWGTENKIWTVP
                     LFLIILVVIRGICRFTSTYLMTWVSVMTISKIRKDMFAKMLTLSSRYHQETPSGTVLM
                     NMLNLTEQSVSNASDIFTVLTRDTMIVTGLTIVLLYLNWQLSLIVVLMFPLLSLLSRY
                     YRDRLKHVISDSQKSIGTMNNVIAETHQGHRVVKLFNGQAQAANRFDAVNRTIVRLSK
                     KITQATAAHSPFSELIASIALAVVIFIALWQSQNGYTTIGEFMAFIVAMLQMYAPIKS
                     LANISIPMQTMFLAADGVCAFLDTPPEQDKGTLAPQRVEGRISFRNVDVEYRSDGIKA
                     LDNFNLDIRQGERVALVGRSGSGKSTVVNLLPRFVEPSAGNICIDGIDIADIKLDCLR
                     AQFALVSQDVFLFDDTLFENVRYSRPDAGEAEVLSALQAANLQSLIDASPLGLHQPIG
                     SNGSNLSGGQRQRVAIARAILKDAPILLLDEATSALDNESERLVQQALERLMENRTGI
                     IVAHRLTTVESADRIIVMDGGKIIEQGTHDQLMFQNGYYTMLRNISGKDTAAVQTA"
     gene            12641..14206
                     /gene="guaA"
                     /locus_tag="ACFJAG_001035"
     CDS             12641..14206
                     /gene="guaA"
                     /locus_tag="ACFJAG_001035"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003922 - GMP synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006177 - GMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HFC3980342.1"
                     /translation="MTQDKILILDFGSQVTRLIARRVREAHVYCELHSFDMPLDEIKA
                     FNPKGIILSGGPNSVYESDYQADTGIFDLGIPVLGICYGMQFMAHHLGGEVQPGNQRE
                     FGYAQVKTIDSGLTRGIQDDAPNTLDVWMSHGDKVSKLPDGFAVIGDTPSCPIAMMEN
                     TEKQFYGIQFHPEVTHTKQGRALLNRFVLDICGAQPGWTMPNYIEEAVAKIREQVGSD
                     EVILGLSGGVDSSVAAALIHRAIGDQLTCVFVDHGLLRLNEGKMVMDMFARNLGVKVI
                     HVDAEGQFMAKLAGVTDPEKKRKIIGAEFIEVFDAEEKKLTNAKWLAQGTIYPDVIES
                     AGAKTKKAHAIKSHHNVGGLPENMKLKLLEPLRDLFKDEVRELGVALGLPREMVYRHP
                     FPGPGLGVRILGEVKKEYADLLRQADDIFIQELRNTTDENGTSWYDLTSQAFAVFLPV
                     KSVGVMGDGRTYYYVVALRAVITSDFMTAHWAELPYSLLGRVSNRIINEVKGINRVVY
                     DVSGKPPATIEWE"
     gene            14268..15014
                     /gene="fabG"
                     /locus_tag="ACFJAG_001036"
     CDS             14268..15014
                     /gene="fabG"
                     /locus_tag="ACFJAG_001036"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004316 - 3-oxoacyl-[acyl-carrier-protein]
                     reductase (NADPH) activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HFC3980343.1"
                     /translation="MSTQDLSGKIALVTGASRGIGAAIADTLAAAGAKIIGTATGESG
                     AAAISKRLAQWGGEGRVLNSAEPETVENLIADIEKTFGKLDILVNNAGITRDNLLMRM
                     KEEEWDDIMQVNLKSVFRASKAVLRGMMKQRAGRIINITSVVGVMGNAGQTNYAAAKA
                     GLIGFAKSMAREVGSRGITVNCVAPGFIDTDMTRALPEETRQTFTAQTALGRFGDAQD
                     IADAVLFLASDQAKYITGQTLHVNGGMLMP"
     gene            15079..15564
                     /locus_tag="ACFJAG_001037"
     CDS             15079..15564
                     /locus_tag="ACFJAG_001037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YchJ family protein"
                     /protein_id="HFC3980344.1"
                     /translation="MNTHHHLPCPCGSGTSYAGCCRPLHLRQILPPTAEALMRSRYGA
                     YVLHLIDYIIATTVPAQQTFLDAAELMQWSREAEWLGLNVIAHRNLGKQHAQVEFEAY
                     FQDGGNRTVHHELSAFVKIAEQWYFIDPTVPLPTMKQPCICGSSKKFKACCGKYLQPV
                     A"
     gene            complement(15784..16578)
                     /locus_tag="ACFJAG_001038"
     CDS             complement(15784..16578)
                     /locus_tag="ACFJAG_001038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HFC3980345.1"
                     /translation="MLHRLQKVVRHIAQTEIMPRFLNTPSRRKEDGSMLSEADIAAQT
                     AFAAALPLLIDCPMLGEEMSRQEQSALWEQYSGEKGLWIVDPIDGTNNFVNGLPHFAV
                     SVAFVRNGRAELGVIYNPVSGECFYAERGQGAFLNGTRLPLRLVDKKLNEAIAGVEIK
                     YLRSGKLSSRMSTLAPFGTIRSMGSSTLDWCYLACGRYDVYVHGGQKLWDYAAGALIF
                     EEAGGRLTTLEGDGFWSGEHVFKRSVVAALEPKLFERWVGWIRENQ"
     gene            16682..17407
                     /locus_tag="ACFJAG_001039"
     CDS             16682..17407
                     /locus_tag="ACFJAG_001039"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HFC3980346.1"
                     /translation="MPRFYLPENLSVGQTVALPDNIVRHLNVLRVRPNENITLFDGKG
                     KAHTARLTVLEKHRAEAEILHEDTTDNESPLNITLIQSISSGDRMDFTLQKSVELGVT
                     AIQPVISERCIVRLDGERAAKRLARWQEIVISACEQSGRNTVPPVLPIIGYREALDKM
                     PSESTRLIMSINRACKLGDIRHPSGAIVFMVGPEGGWTEQEEQQAFEAGFQAVTLGKR
                     ILRTETAPLAAIAAMQTLWGDFT"
     gene            complement(17750..18592)
                     /locus_tag="ACFJAG_001040"
     CDS             complement(17750..18592)
                     /locus_tag="ACFJAG_001040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 25 protein"
                     /protein_id="HFC3980347.1"
                     /translation="MQNHVISLASAAERRAHIAATFGSRGIPFQFFDALMPSERLEQA
                     MAELVPGLSAHPYLSGVEKACFMSHAVLWKQALDEGLPYVAVFEDDVLLGKDAEKFLA
                     EDTWLEERFDKDSAFIVRLETMFAKVIVRPDKVLNYENRSFPLLESEHCGTAGYIISR
                     EAMRFFLDRFAVLPAERIKAVDLMMFTYFFDKEGMPVYQVSPALCTQELHYAKFLSQN
                     SMLGSDLEKDREQGRRHRRSLKVMFDLKRALGKFGREKKKRMESQRQAELEKVYGRRV
                     ILFK"
     gene            complement(18611..>19245)
                     /locus_tag="ACFJAG_001041"
     CDS             complement(18611..>19245)
                     /locus_tag="ACFJAG_001041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HFC3980348.1"
                     /translation="LSEENNKSVLAAIARNGAIWDKPTRHEDIVAVFPFGNPIHNNTM
                     IMRRSVIDGGLRFDPAYIHAEDYKFWYEAGKLGRLAYYPEALVKYRFHQDQTSSKYNL
                     QQRRTAWKIKEEIRAGYWKAAGIAVGADCLNYGLLKSTAYALYEKALSGQDIGCLRLF
                     LYEYFLSLEKYSLTDLLDFLTDRVMRKLFAAPQYRKILKKMLRPWKYRSY"
BASE COUNT         4901 a         5958 c         4474 g         3912 t
ORIGIN      
        1 caaatctgtt gaatacgcgt cggttcaaaa cgcagcgaac cgattatacc gactcgccga
       61 tattttatcc acaacccgtg caaaaattta tccacagaaa ggcggcagaa atccgcaggc
      121 aatcgggcaa tcctcctgca aagtttctat attgattgac aaaagcggca aattggagtg
      181 taattcacgg tttaattatc tacccattct attttaggaa ccatcatgaa acgcacttat
      241 caaccttccg ttaccaaacg caaacgcacc cacggcttcc tcgtgcgctc caaaacacgc
      301 ggcggacgcg cagtattggc cgcacgccgt gccaaaggcc gcaaacgcct ggcagtgtaa
      361 ttttggacta ccgcttcgga aggcagtacc gcttgttaaa aacggatgat ttttcatccg
      421 tttttgcatt cagaaaccgc cgcagccgcg acctgctgca agtttcgcgc tcaaacggca
      481 acgggctgga ccatccccgc atcggtctgg tggtcggcaa aaaaaccgcc aaacgcgcca
      541 acgagcggaa ctatatgaaa cgcgtcatcc gcgactggtt cagattgaac aaaaaccggc
      601 tgccgcctca ggatttcgtc gtgcgcgtcc gccggaaatt cgacagggct accgcaaaac
      661 aggcaagggc ggaactggca caactcatgt tcggcaaccc cgcaaccgga tgcgggaaac
      721 aggtatgatc agaacggtac cctgcaggca aggttcagac ggcaacgggt ttcccataca
      781 aggaacatcc cgatgaactt cctattgtcc aaactgctgc tggggctgat aaggttttac
      841 caatactgca tcagcccgct gattccgccg cgctgccgtt atacgccgac ctgttcgcaa
      901 tacgcggtcg aagcggtcaa aaaatacggc gcattcaaag gcctccggct cgccatcaag
      961 cgcattgcac gctgccaccc tttcggcgga cacggacacg accccgttcc ctgacccgac
     1021 gcaatattca aattgcacgc tttcctttta tttcccatcg gtttctatat aatgccgtct
     1081 gaaccttcgg gctggcggca cggccgtcgg gtatgaagcc cgcccttatt ccccgtctat
     1141 cggaacacgc aacctgcggc atttccgacc attcaggaaa ctctatatgg attttaaaag
     1201 actcacggcg tttttcgcca tcgcgctggt gattatgatc ggctgggaaa aaatgttccc
     1261 caccccgaaa cccgtccccg cgccccaaca ggcggcacaa aaacaggcag caaccgcttc
     1321 cgccgaagcc gcgctcgcgc ccgcaacgcc gattaccgta acgaccgaca cggttcaagc
     1381 cgttattgat gaaaaaagtg gcgacctgcg ccggctgacc ctgctcaaat acaaagcaac
     1441 cggcgacgaa aacaaaccgt tcgtcctgtt tggcgacggc aaagaataca cctacgtcgc
     1501 ccaatccgaa cttttggacg cgcagggcaa caacattctg aaaggcatcg gctttagcgc
     1561 accgaaaaaa cagtacaccc tcaacggcga cacagtcgaa gtccgcctga gcgcgcccga
     1621 aaccaacgga ctgaaaatcg acaaagtcta tacctttacc aaagacagct atctggtcaa
     1681 cgtccgcttc gacatcgcca acggcagcgg tcaaaccgcc aacctgagcg cggactaccg
     1741 catcgtccgc gaccacagcg aacccgaggg tcaaggctac tttacccact cttacgtcgg
     1801 ccctgttgtt tatacccctg aaggcaactt ccaaaaagtc agcttctccg acttggacga
     1861 cgatgcgaaa tccggcaaat ccgaggccga atacatccgc aaaaccccga ccggttggct
     1921 cggcatgatt gaacaccact tcatgtccac ctggatcctc caacctaaag gcggccaaag
     1981 cgtttgcgcc gcaggcgact gccacatcga catcaaacgc cgcagcgaca agctgtacag
     2041 cgcaagcgtc agcgtgcctt tagccgctat ccaagccggc gccaaagccg aaactgccgt
     2101 caacctgtat gccggtccgc aaaccacatc cgttatcgca aacatcgccg acaacctgca
     2161 actggcaaaa gactacggta aagtacactg gttcgcatcg ccgctcttct ggctcctgaa
     2221 ccaactgcac aacattatcg gcaactgggg ctgggcaatc gtcgttttga ccatcatcgt
     2281 caaagccgta ctgtatccat tgaccaacgc ctcctaccgt tcgatggcga aaatgcgtgc
     2341 cgccgcaccc aaactgcaga ccatcaaaga aaaatacggc gacgaccgta tggcgcaaca
     2401 gcaagcgatg atgcagcttt acaaagacga gaaaatcaac ccgctgggcg gctgtctgcc
     2461 tatgctgttg caaatccccg tcttcatcgg cttgtactgg gcattgttcg cctccgtaga
     2521 attgcgccag gcaccttggc tgggctggat taccgacctc agccgcgccg acccctacta
     2581 catcctgccc atcattatgg cggcaacgat gttcgcccaa acctatctga acccgccgcc
     2641 gaccgacccg atgcaggcga aaatgatgaa aatcatgccg ttggttttct ccgtcatgtt
     2701 cttcttcttc cctgccggtt tggttctcta ctgggtggtc aacaacctcc tgaccatcgc
     2761 ccagcagtgg cacatcaacc gcagcatcga aaaacaacgc gcccaaggcg aagtcgtttc
     2821 ctaaatgccg cagcatgaaa aatgccgtct gaaacctgtt cagacggcat ttttattgtt
     2881 caccccctat cggggcggaa atcttcaacc cgcatacatc acaaaaatcg tcgggcgttt
     2941 tttcagattg ggcatttcct tcatcctgcg ccaatccgca accgttttac tgaccaccaa
     3001 ctgagtcggc aacgtcaaat ccgtagccgt acacaagcgc gtttcaggat gcaggttttc
     3061 caccgcatcg gcaagcagcg catcattgcg gtaaggcgtt tcaataaaaa tctgcgtctc
     3121 gccgcactgc cgcgaacgtt gctccaaagc attcaaactc tgaatgcgct catttttttc
     3181 agacggcaga taaccattaa acgcaaagtt ctgcccattc gcacccgaag ccatcagcgc
     3241 cagcagcagg ctggacgggc cgaccaaagg ccgtacttca aaaccgtgtt tatgcgccaa
     3301 tgccaccaaa ttcgcgcccg gatcggcaac agccgggcaa cccgcctcgc tgacaatccc
     3361 catactgcgc ccttcttgca aaggtttcag caattccggc aaagtcttca aatccgtgtg
     3421 ttcattcaac gtttgcagat tcagttcgcg tatcggcgtc gttatcccca aatgcttcaa
     3481 atgcgcacgc gccgtttttt ccgcttccac gacaaaatcc gtcagcccga caaccgcccg
     3541 ttgttcatgc tgcaacaggc acggcgtgtc aggcgtaccc aaaggcgtag gaatcaaata
     3601 caaaacagga gacatcattc cctcactcat cggttaaaaa tgccgtccga acccttcaga
     3661 cggcataaac gggcagttac aaaacatcca cgccctcgtt tttcaaaaaa tcgaccagac
     3721 ggaaaaccgg cagaccaatc aaggcattcg gatcggtact ttcaatccgt tcgatcaaca
     3781 gcgcgcccaa gccctcgctt ttcgccgcac acgaacaata aaccgcatcc ggctcgcgct
     3841 ccaaatagcg gaggatgtgc agctcgtcca actgcctcat cacgaccacc gtcttatcga
     3901 tatgccgatg catcctgccc gtaaccgtat ttagcagaac gaccgcactg taaaactcaa
     3961 tctccctgcc gctcaaatgc atcaacatct tttgcgcgtt ggcaaggttc atcggcttgc
     4021 cccactgcct gccgtcgcac cacgccacct ggtccgcacc gacaatcaac gccccgggga
     4081 aacgcccggt caacgaccgc gccttaccct cggcaaggcg caatgccgtc tgaggggcgg
     4141 attcccccaa catcggcgtt tcgtcaaaat cgggggatgc cgcctgaaag gcaatgccga
     4201 gcctttccat ctgttcgcgg cggaaaaccg aactcgtacc caaaaccaaa ggcagttcca
     4261 aacccatccc atcctcctta ccgttgaaaa cacgcccgaa ggggcggtaa aatccagcca
     4321 tgcgccgaaa cacggacgcc cgccttcggc gtaccgcaac atttttctta aaaatattga
     4381 cgttagaaca tctaaattat atcatacccc gtttatgtca gaccctaatt tgattgaccc
     4441 ggaaattttt gccgccgaaa ggcagaacct gcaaggcagt tttctgctgg aagaattgga
     4501 cgagcgagtc agtttgcacg attatcccgc cgacaggcgg accaaaatat cgtttacact
     4561 gaccggcggt cgcgaccggc tgcaacgcct gttcctcgac ctgaacgtca aagccgatat
     4621 gcccctgatt tgccagagat gtatcaaacc catgccgttc atgctcgatg aaagcagccg
     4681 tatcgtcctg ttttccgacg aagagtcctt ggacgaatcc atgcttgccg acgaagaact
     4741 cgaaggcata ctgattgaaa aagaactcga cgtgcgcgca ttggtagaag accaaatcct
     4801 gatgtccctg cccttttcgc cgcgacacgg acactgcggc aatacccttc cggaatccgc
     4861 caaccaagac aaacccaacc cctttgctgt tttggcgggt ttgaaaagca gttaattagg
     4921 acacagttta tttatctagg agcttgaaat ggccgttcaa caaaacaaaa aatccccttc
     4981 caaacgcggt atgcaccgtt cgcacgacgc actgaccgcg cccgcactgt ttgtcgacag
     5041 cacaaccggc gaagtacacc gcccgcacca catctccccc aacggtatgt accgcggccg
     5101 caaagtggtc aaagccaaag gcgaataatc cctattcgac tgactgaaaa agccagaaca
     5161 ttgccatgca attactggct ttttttgcat tggacgcacc atccgtccaa actttcgcca
     5221 tacgtcaaca cacaggggca aagcgttccg tataataccc cgtgaaaata ttccaaaagc
     5281 cccaaccacc aaggaaattc cgatgaaaca gaaaatctgg tacacctacg atgacatcca
     5341 ccgcgtcatc aaagcattgg cagaaaaaat ccggaacgcc ggcgtcaaat acgatgccat
     5401 gatcgctatc ggcggcggcg gctttattcc ggcacgcatg ctgcgctgtt ttctggaaat
     5461 tccgatttat gccgtaacca ccgcctatta cgacagcgac aacgaaggac aagttaccga
     5521 agaagtcaaa aaagtccaat ggctagaccc cgtccccgaa gtcctgcggg gcaaaaacgt
     5581 gctcgtcgtc gatgaagtgg acgacagccg cgtaaccatg gagttctgcc tgaaagaact
     5641 gctcaaggaa gacttcgaca ctgtcggcgt cgccgtcctg cacgaaaaaa tcaaagccaa
     5701 agcaggcaaa atccccgaag gcattcccta tttcagcggc attaccgtag aagactggtg
     5761 gatcaactat ccgtgggacg cactcgacat cgacgaacac aaccgccttg ccgaagccgg
     5821 ccgaggctaa ccctttcaga cggcatattt tccgaaccga tgccgtctga agcccgcacg
     5881 acccctgccg cagaccgaaa atctaccgga gaaaccccta tgattacatt ggccgtagat
     5941 gccatgggcg gcgaccaagg acttgccgtt accgtacccg gcgcaaccgc attcctccaa
     6001 gcacaccccg atgtccgcct gattatgacc ggcgacgaaa cgcagctccg ccaagccctg
     6061 aacgcggcag gcgcgccgat ggaacgcatc gacatctgcc ataccaccca ggttgtcggc
     6121 atggatgaat cccctcagtc cgccctaaag aacaaaaaat actcctccat gcgcgttgcc
     6181 atcaaccaag ttaaagaagg caaagcccaa gccgccgtat ccgcaggcaa cacgggcgcg
     6241 ctcatggcaa ccgcacgttt cgtcctcaag accatacccg gcatcgaacg ccccgccatc
     6301 gccaaattcc ttccttccga caccgaccac gttaccctcg ccctcgacct cggcgcaaac
     6361 gtcgactgca cacccgaaca gcttgcccaa tttgccgtca tcggcagcga actcgtccac
     6421 gcgctccatc ctcaaaaagg acagccgcgc gtcgggctgg tcaacgtcgg cacagaagac
     6481 atcaaaggta cggataccgt caaacaaacc tacaaactgc tgcaaaacag caaactcaac
     6541 tttatcggca acatcgaaag caacggcatc ctgtacggcg aagcagatgt cgtcgtcgcc
     6601 gacggctttg tcggcaacgt catgctcaaa accatcgaag gcgcagtcaa attcatgagc
     6661 ggagccatcc gccgcgaatt ccagagcaac ctgttcaaca aacttgccgc cgttgccgcc
     6721 ctacccgccc tcaaaggctt gaaaaacaaa ctcgatccgc gcaaattcaa cggggccatc
     6781 ctgctcgggc tgcgcggcat cgtcatcaaa agccacggcg gcacagacaa aaccggtttc
     6841 cgctacgcac tcgaagaagc ctaccacgaa gccaagtccg ccggcctttc caaaatcgaa
     6901 caaggcgttg ccgaacaact cgccgcactg gaagccgccc aaaacgaaac cgccgccagt
     6961 ctgtaacacg cacgatgccg tctgaacgcc cccgcccctt tcagacggca tccggcaccc
     7021 gtccaaacct gcgggcgcgg acggcgatgc gcctgtccgg cacttcccaa atacttccct
     7081 gtaaaataag gagtatttga aaaatgaaga cattagaaaa acggatgaaa gctctagaca
     7141 aacggatgat gaagttcgga aaatcccttg aaggcaggct tgatgcccgt ctgattgaat
     7201 ccgcattgga ttatattcat tattcggaac gttttttggc ttttgacatc ctgtgtactt
     7261 atatcgaaga tttcgatatc cggctgacgg aacaagaatc ccgggaaatt tcttttatca
     7321 acaaggaatt tgagatagaa agcacgtccg attaaccaat aaagccaatg atttgataag
     7381 aatgaaaaca tcgacggtcg tttttggcgg attttttatg gcagacaacg gggagcgaat
     7441 ccaaatcccc gttttggaaa atcctgacat tagggaaatc aatcgctttt tttccgtatc
     7501 aaattttgag aaaaaagccg gcgtccttgt tttcagaatc atccccgagc cggaatttgg
     7561 caataccgaa ttaactgtct attttgaaaa aggatattat agtggattaa caaaaaccgg
     7621 tacggcgttg ccccgccttg gctcaaaggg aacgattccc taaggtgccc aagcaccaag
     7681 cgaaccggtt ccgtactatc cgtactgtcc gcggcttcgc cgccttgtcc tgatttttgt
     7741 taatccacta tatttgccaa taattcaaac aattttagaa ggcggggata ttaaagtaaa
     7801 aaaccttaaa acagaaaatt acagcgggaa ggcaagggaa atcttgggag attcctaccc
     7861 tattgaacat atctctaaaa atatttctac aattcaaaat atcatttccg aatttatcag
     7921 acaaaaacaa acaccggcac caaataattt gatggaaacc caacaatcaa gatgccgtct
     7981 gaagcagctt gggctttcag acggcatttc cttcgcttaa aacagcgtat cggcaacccc
     8041 gccccgcccg tccacggcaa tccgcatctg aaaaccatct gtatgccaaa ccacaccccc
     8101 atccctgttt ccgtcatttg caccctgccc gtattgggca atcatcggtt tttcgcttac
     8161 aatagccgaa tctgaaccaa ctctctaaaa aggccgttcc catgcagtat gcaaaaattt
     8221 ccggcacggg cagctatctt cctgccaacc gcgtcagcaa tgacgacctt gcccaaaagg
     8281 tagatacctc tgacgagtgg attaccgcgc gtacgggcat caaattccgc catattgcag
     8341 ccgaaaacga aaaaaccagc gatcttgcag ccgaagcggc gcggcgcgct ttggcagatg
     8401 ccaaattaaa tataaacgac attgatttga ttatcgtggc gacggcaacg ccggatatgc
     8461 agtttccttc taccgccacc atcgtgcagc aaaaattggg catcaccaac ggctgccccg
     8521 cgtttgacgt gcaggcggtg tgcgcaggct ttatgtacgc gctgactacg gcaaatgcct
     8581 acattaaaag cggtatggcg aaaaacgcgc tggtcatcgg cgcggaaacc ttcagccgca
     8641 tcgtcgattg gaacgaccgc acaacctgcg tgctgttcgg cgacggcgcg ggcgcggtgg
     8701 ttttaagcgc gtccgacaaa ccgggcatca tccacagcaa actcaaagcc gacggcaatt
     8761 atctgaaact cttaaacgtc cccgggcaaa tcgcctgcgg caaagtttcc ggttcgccgt
     8821 acatttcgat ggacggtccc ggcgtgttca agtttgccgt caaaatgctg tccaaaatcg
     8881 ccgatgacgt tatcgaagaa gcaggttaca ccgccgaaca aatcgactgg attgttcccc
     8941 atcaggcaaa ccgccgcatt atcgaatcga ccgcgaaaca tttgggtttg agtatggaca
     9001 aagtcgtcct gaccgtccaa gaccacggca acacgtccgc cgcatccatt ccgctggctt
     9061 tggacgcggg catccgcagc ggacaaatca aacgcggtca aaacctgctg ctcgaaggca
     9121 taggcggcgg tttcgcgtgg ggcgcggtgc tgttgcaata ttgaaaccgg tgccgtctga
     9181 aacaggcttt cagacggcat ttcccatatc atgaagcggc aggctttctt caaaccgatg
     9241 gcgtgtgcgg catttctgtc cgccgtttcg ctgcgcctcc ccgtattggg cgcgtgttac
     9301 gcaatattgt ccctctatgc gtttgcactt tacggcatcg acaaacggcg tgccgtgcgg
     9361 ggaaaacgcc gcattcccga acaccgcctg ctcctgcctg ccttgttcgg cggttggacg
     9421 ggcgcatact tgggtagtag gatgttcagg cataaaacgg cgaaaaagcg ttttgttgtg
     9481 ctgttccgtc tgactgtttc gggcaatgtc ctggcgacct gcatcctgat tgattatttc
     9541 gttccgcccg aactttttgt aaaactcggg caacatctct gacaatccaa cccaacaaag
     9601 gaatactatg tctttcgcat tcttcttccc cggacaaggt tcccaaagcc tcggcatgat
     9661 gaacggcttt gccgaacacg ccatcgtcaa aaacacattt gacgaagcct ccgccatatt
     9721 ggggcaggac ttgtgggcga tgattaacgg cagcgatgcc gaaatcatcg gtcaaacagt
     9781 caacacccag cccattatgc tcgccgccgg cgttgccgtt taccgcgcct atttggaagt
     9841 gggcggcaaa acgcctgccg ccgttgccgg acacagcctc ggcgaataca ccgcgcttgt
     9901 cgccgccgaa gcattggatt ttgccgatgc cgtcaaactc gtccgcctgc gcgccgaact
     9961 gatgcagtcc gccgtaccgc aaggcgtagg cgcaatggcg gccattttgg gtttggaaga
    10021 tgaacaggtc aggcagattt gtgccgaatc cgcacagggc gaagtggtcg aagccgtcaa
    10081 cttcaactcg cccggacaag tcgtgattgc aggcaacgcc gccgccgtcg ggcgcgccat
    10141 ggctgccgcc aaagaagccg gagccaaacg cgccctgccg ctgccggtat ccgttccttc
    10201 ccattgcagc ctgatgaaac ccgccgccga caaacttgcc gaagcactca aaaccgttga
    10261 aatcaaacag ccgcaaatcc gcgtcatcca caacgccgac gttgccgcct acgatgatgc
    10321 cggcaaaatc aaagacgcgc tcgtccgcca gctttacagc cccgtgcgct ggacggaaac
    10381 cgtcaacgcc ctcgtttcag acggcattgc cgaatccgcc gaatgcggcc cgggcaaagt
    10441 gttggcgggc ttggcaaaac gcatcaacaa ggccgccgcg tgcagcgcac tgaccgatgc
    10501 cggacagatt accgccttta tcgaagcgca ctgacttcgt tccgcaaaaa gcagcctgcc
    10561 ctcttcaggc tgcttttcac gtccgaacgg caaacagccg catatttgcg ctataatcca
    10621 tccctaccaa accaccgaca gcggctgccg ttgcagttcc cgccctaccg atatgataga
    10681 aaaactgact ttcggactgt ttaaaaaaga agacgcgcgc agctttatgc gcctgatggc
    10741 gtacgtccgc ccctacaaaa tccgcatcgt tgccgccctg attgccattt tcggcgttgc
    10801 cgccaccgaa agctatcttg ccgccttcat cgcccccctg atcaaccacg gcttttccgc
    10861 gcccgccgcg ccgcccgatc tgtccgccgc cgccggcatc ctttccaccc tgcaaaactg
    10921 gcgcgaacag tttacctata tggtttgggg gacggaaaac aaaatctgga ccgtcccgct
    10981 cttcctcatc atcctcgtcg tcatccgtgg catctgccgc tttaccagca cctatctgat
    11041 gacttgggtc tccgtgatga ccatcagcaa aatccgcaaa gatatgtttg ccaaaatgct
    11101 gaccctttcc tcccgctacc atcaggaaac gccgtccggc accgtactga tgaatatgct
    11161 caacctgacc gaacagtcgg tcagcaacgc cagcgacatc ttcaccgtcc tcacgcgcga
    11221 cacgatgatc gttaccggcc tgaccatcgt cctgctttac ctcaactggc agctcagcct
    11281 catcgtcgtc ctgatgttcc ccctgctctc cctgctctcg cgctactacc gcgaccgtct
    11341 gaaacacgtc atttccgact cgcaaaaaag cataggcacg atgaacaacg tgattgccga
    11401 aacccatcag ggacaccgcg tcgtcaagct gttcaacggg caggcgcagg cggcaaaccg
    11461 gttcgacgcg gtcaaccgca ccatcgtccg cctcagcaaa aaaatcacgc aggcaacggc
    11521 ggcacattcc ccgttcagcg aactgattgc ctcgatcgcc ctcgccgtcg tcatcttcat
    11581 cgccctgtgg caaagccaaa acggctacac caccatcggc gaatttatgg cattcatcgt
    11641 cgcgatgctg caaatgtacg cccccatcaa aagccttgcc aacatcagca tccctatgca
    11701 gacgatgttc ctcgccgccg acggcgtatg tgcatttctc gacaccccgc ccgaacagga
    11761 caaaggcacg ctcgcgccgc agcgtgtcga agggcgcatc agcttccgca acgtcgatgt
    11821 cgaataccgt tcagacggca tcaaagccct cgacaacttc aacctcgaca tcagacaagg
    11881 cgaacgcgtc gccctggtcg gacgttccgg cagcggcaaa tccaccgtcg tcaaccttct
    11941 gccccgcttt gtcgaaccgt ctgccggcaa catctgcata gacggtatcg acatcgccga
    12001 catcaaactc gactgcctgc gcgcccaatt cgccctcgtc tcccaagacg tattcctgtt
    12061 tgacgacacc ctgtttgaaa acgtccgata cagccgtccc gacgcgggcg aagccgaagt
    12121 cctgtccgcc ctccaagccg ccaacctgca aagcctgatc gacgcatccc cgctcggact
    12181 gcaccagccc atcggatcga acggcagcaa cttgtccggc ggacagcggc aacgcgtcgc
    12241 catcgcccgc gccattttga aagacgcgcc gatattatta ttggacgaag ccaccagcgc
    12301 attggacaac gaatccgaac gcctcgtcca acaagcgctc gaacgcctga tggaaaaccg
    12361 caccggcatc atcgtcgccc accgcctgac caccgtcgaa tccgccgacc gcatcatcgt
    12421 catggatggc ggcaaaatca tcgaacaagg cacacacgat caactcatgt tccaaaacgg
    12481 ctactacacc atgctgagga acatctccgg aaaagatacc gccgccgttc agacggcata
    12541 aacaaaatgc cgtctgaaat ggtacaatca tccaaatccc ttcagacggc actatatccg
    12601 ccgacccatc cgattatctt caaccaccgt aaaacccatt atgacccaag acaaaatcct
    12661 catcctcgac ttcggttcgc aagttacccg gctgatcgcc cgccgcgtgc gcgaagcaca
    12721 cgtttactgc gagctgcatt ccttcgatat gcctttggac gaaatcaaag ccttcaaccc
    12781 caaaggcatc atcctttccg gcggccctaa ttctgtttac gaatccgact atcaagccga
    12841 taccggtatt tttgatttgg gcattccggt tttgggcatc tgctacggca tgcagtttat
    12901 ggcgcaccac ttgggtggcg aagtgcagcc cggcaaccag cgcgaattcg gttacgcgca
    12961 agtcaaaacc atcgacagcg gactgacacg cggcattcaa gacgacgcgc ccaacacact
    13021 cgacgtatgg atgagccacg gcgacaaagt gtccaaactg cccgacggtt tcgccgtcat
    13081 cggcgacact ccgtcctgcc cgattgccat gatggaaaac accgaaaaac aattctatgg
    13141 catccagttc caccccgaag ttacccacac caaacaaggc cgcgccctgt tgaaccgctt
    13201 tgtcttggat atttgcggcg cgcaaccggg ctggacgatg cccaactaca tcgaagaagc
    13261 cgttgccaaa atccgcgaac aagtcggcag cgacgaagtg attttaggtc tgtccggcgg
    13321 cgtggactct tccgtagccg ccgcgctgat tcaccgcgcc atcggcgacc aactgacctg
    13381 cgtgttcgtc gatcacggtt tgttgcgcct gaacgaaggc aaaatggtga tggatatgtt
    13441 cgcccgcaac ttgggtgtga aagtgataca cgtcgatgcc gaagggcagt ttatggcgaa
    13501 actcgccggc gtgaccgacc ctgagaaaaa acgcaaaatc atcggcgcgg aatttatcga
    13561 agtatttgat gccgaagaga aaaaactcac caacgccaaa tggctggcgc aaggcacgat
    13621 ttaccccgac gtaatcgaat ccgccggtgc gaaaaccaaa aaagcccacg ccatcaaatc
    13681 ccaccacaac gtcggcggcc tgcctgaaaa tatgaagctc aaactgcttg agcccttgcg
    13741 cgacttgttc aaagacgaag tgcgcgagtt gggcgtggct ttgggcctgc cgcgcgaaat
    13801 ggtgtaccgc caccccttcc cgggccccgg tttgggtgtg cgcatcttgg gcgaagtgaa
    13861 aaaagaatac gccgacttgc tgcgtcaggc ggacgatatt ttcatccaag aattacgcaa
    13921 tactaccgac gaaaacggca cgtcttggta tgacctgacc agccaggcat ttgccgtgtt
    13981 cctgcccgtc aaatccgtcg gcgtgatggg cgacggccgc acttactact acgtcgtcgc
    14041 actgcgcgca gtcatcacca gcgactttat gactgcacac tgggcagagc tgccatactc
    14101 actgctcggc cgcgtgtcca accgcatcat caacgaagtc aaaggcatca accgcgtggt
    14161 gtacgatgtc agcggcaaac cgcccgccac catcgagtgg gaataaacag caaacagggc
    14221 tgcaccgtcc ggcgcagtcc ttcgattatc ggaaaaaagg aaaaaatatg agcacacaag
    14281 atttaagcgg caaaatcgct ttggtaaccg gcgcatcgcg cggcatcggc gcggcaattg
    14341 ccgacacact ggcggcagcc ggtgccaaaa tcatcggtac ggcaaccggc gagagcggtg
    14401 cggcggcgat tagcaaacgt ctggcacaat ggggcggcga aggccgcgta ttaaattccg
    14461 ccgaacccga aaccgtcgaa aacctgattg ccgacatcga aaaaacgttc ggcaaactcg
    14521 acattctggt caacaacgcc ggcatcaccc gcgacaacct gttgatgcgt atgaaagaag
    14581 aagagtggga cgacatcatg caggtcaacc tcaaatccgt gttccgcgct tctaaagccg
    14641 tcttgcgcgg catgatgaag cagcgcgccg gccgcatcat caacatcacc tccgtcgtcg
    14701 gcgtgatggg caatgccggg caaaccaatt atgccgccgc aaaagcgggc ttgatcggtt
    14761 ttgccaaatc tatggcgcgc gaagtcggca gccggggcat taccgtcaac tgcgtcgccc
    14821 cgggctttat cgataccgat atgacccgcg ccctgcccga agaaacccgc caaacattta
    14881 ccgcccaaac cgccttgggc agattcggcg acgcgcaaga catcgccgat gcggttctgt
    14941 tcctcgcttc cgatcaggcg aaatacatca ccggtcaaac gctgcacgtc aacggcggta
    15001 tgctgatgcc ctaacggaca ggcttttcaa ccatgccgtc tgaagccctt tcagacggca
    15061 tttgcattcc caaacaaaat gaacactcac caccacctgc cctgcccctg cggttcaggc
    15121 acaagctatg ccggctgctg ccgaccgctt catctgcgcc aaatcctgcc gcccaccgcc
    15181 gaagccctca tgcgttcgcg gtacggcgcg tatgtgctgc accttatcga ctacatcatc
    15241 gctactaccg ttccggcgca acaaacattc ctcgatgccg ccgaactgat gcagtggagc
    15301 agagaagccg aatggctggg cttgaatgtc atcgcacacc gcaacctcgg caaacagcac
    15361 gcccaagtcg aatttgaagc ctacttccaa gacggcggaa accgaacagt gcatcacgag
    15421 ctgtcggcat tcgtgaaaat agcggagcaa tggtatttca tcgatccgac tgttccgctg
    15481 cctaccatga aacagccctg catttgcgga tcgagcaaaa aattcaaagc ctgctgcggc
    15541 aaatatctgc aacctgtcgc ataaaaatgc cgtctgaacg ttcagacggc attttcaacg
    15601 cgcaaaaaaa aaaccattca taccaagggt aagtatgaat ggtcaataca ttgcgggaaa
    15661 acatcttact tgctgcactg ccgaaaaggg agaaacgaca gtgttaacca gcaaaagcat
    15721 tgtaccttta ttaatgttaa aaaacattaa ttttgaaaat atattaacga atatatctgg
    15781 aacctactgg ttttcccgta tccacccgac ccagcgttca aacagcttcg gttcgagcgc
    15841 ggcgacgacc gagcgtttga acacgtgttc accactccaa aacccgtcgc cttccaaagt
    15901 cgtcagcctg ccgcccgcct cctcgaaaat caacgcaccc gcagcataat cccacagctt
    15961 ctgcccgccg tggacataaa catcataacg cccgcacgcc agataacacc agtccagcgt
    16021 gctgctgccc atactgcgta tcgtcccgaa aggcgcgagc gtactcatgc ggctggaaag
    16081 tttgcccgaa cgcagatatt tgatttccac gcccgcaatc gcctcattga gttttttatc
    16141 cacgagacgc aaaggcaggc gtgtcccatt aagaaacgca ccctgcccgc gttcggcata
    16201 aaaacattcg ccgctgaccg gattgtagat tacgcccaat tcggcgcgcc cgttgcggac
    16261 aaacgccacc gacacggcaa aatgcggcag cccgttgaca aaattgttcg tcccgtctat
    16321 cggatcgaca atccacagcc ccttttcccc cgaatattgt tcccacaaag ccgactgttc
    16381 ctgccgcgac atttcctcgc ccaacatcgg gcaatcgatc agaagcggca acgcggcggc
    16441 aaatgccgtc tgcgcggcaa tgtccgcctc gctcaacatc gaaccgtctt ccttgcggcg
    16501 ggacggcgta ttcaaaaaac gcggcataat ttcggtttgc gcgatatggc gcacgacttt
    16561 ctgcaaacgg tgtaacactt cctactgtcc tcatattttg aacttgcggc gcgcgaacgt
    16621 ataatgtccg tttccatcac gccgctgcga cggattataa ccgtccgaac cgccaaaaac
    16681 tatgcccaga ttctacctgc ccgaaaacct ttccgtcgga caaaccgtcg ccctgcccga
    16741 caacatcgtc cgccacctca acgtcctgcg cgtccgcccc aacgaaaaca tcaccctctt
    16801 cgacggcaaa ggcaaggcac ataccgcacg gctgaccgtt ttggaaaaac accgcgccga
    16861 agccgaaatc ctgcacgaag acacaaccga caacgagtcc ccgctcaaca tcacgctcat
    16921 ccaatccatt tcctccggcg atcgcatgga tttcaccctg caaaaaagcg tcgaactcgg
    16981 cgtaaccgcc atacagcccg tcatcagcga acgctgcatc gtccgcctcg acggagaacg
    17041 cgccgccaaa cgcctcgcac gctggcagga aatcgtcatc tccgcgtgcg aacaaagcgg
    17101 caggaacacc gttccccccg tactgcccat catcggctac cgtgaagcac tcgacaaaat
    17161 gccgtctgaa agcaccaggc tgattatgag catcaaccgc gcctgcaaac tcggcgacat
    17221 ccgccacccg tccggcgcaa tcgtctttat ggtcgggccc gaaggcggct ggacagaaca
    17281 ggaagaacaa caggcatttg aagccggctt tcaggcggtt acactcggaa aacggatttt
    17341 acgcacagaa accgccccac tcgccgccat cgccgcgatg cagacgcttt ggggcgattt
    17401 tacctagcag atgaaaaaac acgggatttt atccgaaaaa gcaacaatcc ccccgccgtc
    17461 atccccgcga aagcgggaat ctggaaacga aaaactacag ggatttaccc gaaacaacaa
    17521 accctctccg ccgtcattcc cgcgcaggcg ggaatctaga aatttaacgt tgcggtgatt
    17581 tatcggaaat gactgaaact caacgaaccg gattcccact ttcgcgggaa tgacgaagtg
    17641 gaagttaccc gaaacttaaa acaagcgaaa ccgaacggac tggattcccg cctgcgcggg
    17701 aatgacagtg tgtccatttc tgattttaat cccctatatt ttacacaaac tatttgaaca
    17761 atatgacccg cctgccgtaa actttctcaa gctccgcctg cctttgactc tccattcttt
    17821 tcttcttttc cctaccgaat ttacccaaag cacgcttcaa gtcaaacatc accttcaacg
    17881 aacggcggtg tcttcttcct tgttccctat ctttttccaa atcgctaccc aacatactgt
    17941 tttgactgag aaacttggca taatgcaatt cttgggtaca taaggcggga ctaacctgat
    18001 aaacaggcat cccctcctta tcaaagaaat aagtaaacat catcaaatct accgctttaa
    18061 tccgctctgc cggcaaaacg gcaaacctgt ccaagaaaaa ccgcatcgcc tcacgcgaaa
    18121 tgatatagcc agccgtccca caatgttcgc tctccagcaa aggaaatgac cggttttcat
    18181 aattcaggac tttatccggt ctgacaataa ctttcgcaaa catcgtttcc aaacggacga
    18241 taaaggcgga atccttatca aaacgctctt ccaaccaagt atcttcggca aggaactttt
    18301 ctgcgtcttt gccaagcaga acatcatcct caaatacggc aacatacggt aagccttcgt
    18361 ccaatgcctg tttccacaat acggcgtggc tcataaagca ggctttttcc actccgctca
    18421 aataggggtg cgccgacaag ccggggacga gttccgccat cgcctgttcc agcctttcag
    18481 acggcatcag tgcgtcgaaa aactggaacg ggatgccgcg actgccgaag gttgcggcaa
    18541 tgtgcgccct gcgctctgcg gcggaagcca agctgataac gtggttttgc atgatttatc
    18601 ctgttcggtt tcaatagctg cggtatttcc aagggcgtaa catttttttc aggattttcc
    18661 tatattgcgg tgcggcaaac agcttcctca tcacgcggtc tgtcaagaaa tccagcaaat
    18721 cggtcaaaga atacttttcc aacgacaaga aatattcgta caggaacagg cggaggcatc
    18781 cgatatcctg tccggacaag gctttttcgt acaacgcata tgccgttgat ttcaaaagcc
    18841 cgtaattcag gcagtccgcc ccgacggcta tgcctgccgc cttccaatac cccgccctga
    18901 tttcttcttt gattttccac gccgtcctgc gctgttgcag gttgtatttg gaagaagtct
    18961 ggtcttgatg gaagcggtat ttgaccaagg cttcgggata ataagccagc ctgcccagtt
    19021 tgccggcttc gtaccaaaac ttatagtctt cggcgtggat ataggctgga tcgaaccgca
    19081 aaccgccgtc aatgacgctg cgcctcataa tcatcgtgtt gttgtgtatg gggttgccga
    19141 aagggaaaac ggcgacaatg tcttcatgcc gggtcggttt gtcccaaatt gcgccgtttc
    19201 gggcaatggc ggcaagcacg cttttattgt tttcttccga caaaa
//
LOCUS       DAXFZM010000035        19125 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.035, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000035 DAXFZM010000000
VERSION     DAXFZM010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19125)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19125)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19125
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.035"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..258)
                     /locus_tag="ACFJAG_001042"
     CDS             complement(<1..258)
                     /locus_tag="ACFJAG_001042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980349.1"
                     /translation="MNTKTELQKLLEEDISTLKETLIRVDALPPRYVRSIATPIVRRW
                     LIDKQLNILAKEIGLTIELPILDTSLVFEKLSTLENKVNFYS"
     gene            complement(320..2944)
                     /gene="alaS"
                     /locus_tag="ACFJAG_001043"
     CDS             complement(320..2944)
                     /gene="alaS"
                     /locus_tag="ACFJAG_001043"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004813 - alanine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006419 - alanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HFC3980350.1"
                     /translation="MKTSELRQKFLKFFETKGHTVVRSSSLVPHDDPTLLFTNAGMNQ
                     FKDVFLGFDKRPYSRATTAQKCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFK
                     RDAIHFAWEFLTSPEWLNIPKDKLLATVYAEDDEAYNIWLNEIGMPSERIVRIGDNKG
                     AKYASDNFWQMGDTGPCGPCSEIFYDHGKEIWGGIPGSPEEDGDRWIEIWNCVFMQFN
                     RDEQGNMNPLPKPSVDTGMGLERMAAVMQHVHSNYEIDLFQDLLKAVARETGAPFSME
                     EPSLKVIADHIRSCSFLIADGVLPSNEGRGYVLRRIIRRAVRHGYKLGQSKPFFHKLV
                     ADLVQEMGGAYPELKEKQAQIEEALKNEESRFAQTLETGMALLENALAKGGKTLGGEI
                     IFKLYDTYGFPYDLTADICRERNIEPDEAGFEREMEAQRARARAAQSFKANAQLPYDG
                     QDTEFKGYSERQTESKVLALYKDGGQVVELNEGDSGAVVIDFTPFYAESGGQVGDVGY
                     IFAGENRFEVRDTQKIKAAVFGQFGVQTSGRLKVGDSITAKVDDEIRNANMRNHSATH
                     LMHKALRDVLGGHVEQKGSLVTAESTRFDISHPQAVTAEEIAEVERRVNEAVLANVAV
                     NAAIMSMEDAQKTDAMMLFGEKYGDEVRVLQMGGFSTELCGGTHVSRTGDIGLFKIIS
                     EGGIAAGVRRIEAITGLNALKWAQEQERLVKDIIAETKAQTEKDVLAKIQAGAAHAKA
                     LEKELARAKAELAVHAGAKLLDDAKDLGAAKLVAAQIEADAAALRETVTDLTGKSDNA
                     VILLAAVNEGKVSLCAGVSKALTGKVKAGDLVKFAAEQVGGKGGGRPDLAQAGGTDAD
                     KLPEMLASAEGWLCQKLS"
     gene            3148..4278
                     /locus_tag="ACFJAG_001044"
     CDS             3148..4278
                     /locus_tag="ACFJAG_001044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0019808 - polyamine binding [Evidence
                     IEA];
                     GO_process: GO:0015846 - polyamine transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HFC3980351.1"
                     /translation="MVKHLPLAVLTALLLAACGGSDKPPAEKPAPAENQNVLKIYNWS
                     EYVDPETVADFEKKNGIKVTYDVYDSDETLESKVLTGKSGYDIVAPSNAFVGRQIKAG
                     AYQKIDKSMIPNYKHLNPEMMRLMDGVDPDHEYAVPFYWGTNTFAINTERVKKALGTD
                     KLPDNQWDLVFNPEYTFKLKQCGISYLDSAAEIYPMVLNYLGKNPNSSNTEDIREATA
                     LLKKNRPNIKRFTSSGFIDDLARGDTCVTIGFGGDLNIAKRRAEEAGGKEKIRVMMPK
                     EGVGIWVDSFVIPKDAKNVANAHKYINDFLDPEVSAKNGNFVTYAPSSKPARDLMEDE
                     FKNDNTIFPSGEDLKNSFIMVPIRPAALKFMVRQWQDVKAGK"
     gene            complement(4319..5221)
                     /locus_tag="ACFJAG_001045"
     CDS             complement(4319..5221)
                     /locus_tag="ACFJAG_001045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HFC3980352.1"
                     /translation="MDTAKKDILGSGWMLVAAACFTVMNVLIKEASAKFALGSGELVF
                     WRMLFSTVTLGAAAVLRRDTFRTPHWKNHLNRSMVGTGAMLLLFYAVTHLPLTTGVTL
                     SYTSSIFLAVFSFLILKERISVYTQAVLLLGFAGVVLLLNPSFRSGQEPAALAGLAGG
                     AMSGWAYLKVRELSLAGEPGWRVVFYLSATGVAMSSVWATLTGWHTLSFPSAVYLSGI
                     GVSALIAQLSMTRAYKVGDKFTVASLSYMTVVFSALSAAFFLGEELFWQEILGMCIII
                     LSGILSSIRPIAFKQRLQALFRQR"
     gene            5360..5857
                     /locus_tag="ACFJAG_001046"
     CDS             5360..5857
                     /locus_tag="ACFJAG_001046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane lipoprotein lipid attachment
                     site-containing protein"
                     /protein_id="HFC3980353.1"
                     /translation="MAGMKKYLIPLSIAAVLSGCQSIYVPTLTEIPVNPINTVKTEAP
                     AKGFRLAPSHWADVAKISDEATRLGYQVGIGKMTKVQAAQYLNNFRKRLVGRNAVDDS
                     MYEIYLRSAVDSQRGEINTEQSKLYIENALRGWQQRWKNMDAKPDNPAFTNFLMEVMK
                     MQPLK"
     gene            complement(5919..6824)
                     /gene="mtrA"
                     /locus_tag="ACFJAG_001047"
     CDS             complement(5919..6824)
                     /gene="mtrA"
                     /locus_tag="ACFJAG_001047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter MtrCDE transcriptional
                     activator MtrA"
                     /protein_id="HFC3980354.1"
                     /translation="MDILDKLVDLAQLTGSADVQCLLGGQWSVRHETLQCEGLVHIVT
                     AGSGYLCIDGETSPRPVGTGDIVFFPRGLGHVLSHDGKYGESLQPDIRQNGTFMVKQC
                     GNGLDMSLFCARFRYDTHADLMNGLPETVFLNIAHPSLQYVVSMLQLESEKPLTGTVS
                     VVNALPSVLLVLILRAYLEQDKDVELSGVLKGWQDKRLGHLIQKVIDKPEDEWNIDKM
                     VAAANMSRAQLMRRFKSQVGLSPHAFVNHIRLQKGALLLKKTPDSVLEVALSVGFQSE
                     THFGKAFKRQYHVSPGQYRKEGGQK"
     gene            6953..7288
                     /locus_tag="ACFJAG_001048"
     CDS             6953..7288
                     /locus_tag="ACFJAG_001048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HFC3980355.1"
                     /translation="MFKDWKEHTALVKKSFGELGKAHPKMLQAYGALEQAAAAEALDA
                     KTRELIAIAVAITTRCESCISVHAAAAAKAGATDSEIAGALATAIALNAGAAYTYALR
                     ALEAVETQK"
     gene            7419..7889
                     /locus_tag="ACFJAG_001049"
     CDS             7419..7889
                     /locus_tag="ACFJAG_001049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980356.1"
                     /translation="MKYHRLALFAAISCLLLSAVFIAPYLTAFHEQEKIFEYADLTVT
                     APNRSGRAIKLEADGRQYRLSCYGFDSLCTGGNIGRAIRARQVKIVLSETVGKGFLNG
                     VLLEYRNSGSVYSNKDFSRTEDRLVEVLAQPAVFSLKPGILLLLPAIFLRLKKM"
     gene            7995..8558
                     /gene="pgsA"
                     /locus_tag="ACFJAG_001050"
     CDS             7995..8558
                     /gene="pgsA"
                     /locus_tag="ACFJAG_001050"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008444 -
                     CDP-diacylglycerol-glycerol-3-phosphate
                     3-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HFC3980357.1"
                     /translation="MPWNIPIFLTWLRVLLIPVLIVLFYLPFSWFSEEAVNVAAAVIF
                     AVAALTDWFDGFLARLWKQTSDFGAFLDPVADKLMVAVSLLLLVKLDRTYVLFAMIII
                     GREITISALREWMAQMGKRSSVAVAAVGKFKTAAQMLAIFFLLLNFPDFYGFNLVVIG
                     NILMFIASLLTVWSMLYYLKMAWKEIA"
     gene            8639..8714
                     /locus_tag="ACFJAG_001051"
     tRNA            8639..8714
                     /locus_tag="ACFJAG_001051"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:8672..8674,aa:Gly,seq:gcc)
     gene            8740..8815
                     /locus_tag="ACFJAG_001052"
     tRNA            8740..8815
                     /locus_tag="ACFJAG_001052"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:8773..8775,aa:Gly,seq:gcc)
     gene            8841..8914
                     /locus_tag="ACFJAG_001053"
     tRNA            8841..8914
                     /locus_tag="ACFJAG_001053"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:8873..8875,aa:Cys,seq:gca)
     gene            9015..9104
                     /locus_tag="ACFJAG_001054"
     tRNA            9015..9104
                     /locus_tag="ACFJAG_001054"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9049..9051,aa:Leu,seq:taa)
     gene            9208..10260
                     /gene="sohB"
                     /locus_tag="ACFJAG_001055"
     CDS             9208..10260
                     /gene="sohB"
                     /locus_tag="ACFJAG_001055"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protease SohB"
                     /protein_id="HFC3980358.1"
                     /translation="MWKEILLNYGIFLLELLTVFGAIALIVLAIVQSKKQSESGSVVL
                     TDFSENYKKQRQSFETFFLSEEETKHQEKKEKKKEKAEAKAEKKRLKEGGEKSAETQK
                     SRLFVLDFDGDLYAHAVESLRHEITAVLLIAKPEDEVLLRLESPGGVVHGYGLAASQL
                     RRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFAIIGSVGVVAEVPNIHRLLKK
                     HDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQLFKQFVSENRPGLDIEKI
                     ATGEHWFGRQALALNLIDEISTSDDLLLKAFENKQVIEVKYQEKRSLIQRIGLQAEAS
                     VEKLFAKLVNRRADVM"
     gene            complement(10311..11177)
                     /locus_tag="ACFJAG_001056"
     CDS             complement(10311..11177)
                     /locus_tag="ACFJAG_001056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter six-transmembrane
                     domain-containing protein"
                     /protein_id="HFC3980359.1"
                     /translation="MWKMLKHIAKTHRKRLIGTFSPVGLENLLMLGYPVFGGWAINAV
                     IAGRVWQALLYALVVFLMRLVGAARRIADTRTFTRIYTEIAVPVVLEQRQRQVPHSAV
                     TARVALSREFVSFFEEHLPIAATSVVSIFGACIMLLVLEFWVGVSAVGILALFLWLLP
                     RFAAISENLYFRLNNSLERDNHFIRKGDERQLYRHYGLVSRLRVLISNREAFGYLCVG
                     AAMGILFGFAFVMMTLKGYGSAGHIYSVGTYLWMFAMSLDDVPRLVEQYSNLKDIGQR
                     IEWSERNIKAGT"
     gene            complement(11188..11619)
                     /locus_tag="ACFJAG_001057"
     CDS             complement(11188..11619)
                     /locus_tag="ACFJAG_001057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family winged helix-turn-helix
                     transcriptional regulator"
                     /protein_id="HFC3980360.1"
                     /translation="MNRLDQLGIRINLICNVFDKWIGQQDLNYNLFTVLYTLATEGSR
                     TQKHIGEEWSLPKQTVSGVCKTLAGQGLIEWQEGEQDRRERLLSLTEKGKVHAAPLTE
                     NAQEFSDKVFSTFGDKRTTRLFADLDALAEVMEKTISENKK"
     gene            complement(11854..12723)
                     /locus_tag="ACFJAG_001058"
     CDS             complement(11854..12723)
                     /locus_tag="ACFJAG_001058"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HFC3980361.1"
                     /translation="MSAETYTQIGWVGLGQMGLPMVTRLLDGGIEVGVYNRSPDKTAP
                     ISAKGAKVYGSTAELVRACPVIFLMVSDYAAVCDILNGVRDGLAGKIIVNMSTISPTE
                     NLAVKALVEAAGGQFAEAPVSGSVGPATNGTLLILFGGSEAVLNPLQKIFSLVGKKTF
                     HFGDVGKGSGAKLVLNSLLGIFGEAYSEAMLMARQFGIDTDTIVEAIGGSAMDSPMFQ
                     TKKSLWANREFPPAFALKHASKDLNLAVKELEQAGNTLPAVETVAASYRKAVEAGYGE
                     QDVSGVYLKLAEH"
     gene            complement(12799..13710)
                     /gene="hisB"
                     /locus_tag="ACFJAG_001059"
     CDS             complement(12799..13710)
                     /gene="hisB"
                     /locus_tag="ACFJAG_001059"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004424 - imidazoleglycerol-phosphate
                     dehydratase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase HisB"
                     /protein_id="HFC3980362.1"
                     /translation="MTKTQLHLNNFLTLAQEAGSLPKLAKLCGYRTPVALYKLKQRLE
                     KQAEDPDARGIRPSLMAKLEKHTGKPKGWLDRKHRERTVPETAAESTGTAETRIAETA
                     SAAGCRSVTVNRNTCETQITVSINLDGSGKSRLDTGVPFLEHMIDQIARHGMIDIDIS
                     CKGDLHIDDHHTAEDIGITLGQAIRQALGDKKGIRRYGHSYVPLDEALSRVVIDLSGR
                     PGLVYNIEFTRALIGRFDVDLFEEFFHGIVNHSMMTLHIDNLSGKNAHHQAETVFKAF
                     GRALRMAVEHDPRMAGQTPSTKGTLTA"
     gene            complement(13727..14806)
                     /gene="hisC"
                     /locus_tag="ACFJAG_001060"
     CDS             complement(13727..14806)
                     /gene="hisC"
                     /locus_tag="ACFJAG_001060"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004400 - histidinol-phosphate
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HFC3980363.1"
                     /translation="MKSVRSFIRNDILAMSAYKITDVPPGFAKLDAMESPAHPFEGHE
                     ALMREWRAQLASAPIHLYPNPSGCGLQEALRSAFDIPDCAAVALGNGSDELIQFITML
                     TAKPGAAMLAAEPGFIMYRHNAALYGMDYVGVPLNGDFTLNLPAVLEAVRKHRPALTF
                     IAYPNNPTGVCFTRAEIEAAIEASDGIVVVDEAYGAFNGDSFLPQAGRIPNLIVLRTL
                     SKIGFAGLRIGYATGCPEVIGELQKILPPYNMNQLSLTTAKLALQHYGIISANIDSLK
                     NERERMFAELGKICRLNAFPSQANFITIRVPDADLLFDTLKQNRILVKKLHGAHPLLE
                     HCLRITIGSSAQNDAVLDVIRRLYR"
     gene            complement(14852..16141)
                     /gene="hisD"
                     /locus_tag="ACFJAG_001061"
     CDS             complement(14852..16141)
                     /gene="hisD"
                     /locus_tag="ACFJAG_001061"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004399 - histidinol dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HFC3980364.1"
                     /translation="MKKLNTQSPDFQAGLKALLAFETAQNPETERIVADICADVQKRG
                     DAALIEYTNKFDQTNAKSIDDLILTQADLNAAFERIPNDVQTALQTAARRVESYHQRQ
                     KMESWSYTDEDGTLLGQQITPLDRVGIYVPGGKAAYPSSVIMNAMPAHVAGVKEIIMV
                     VPTPKGERNDIVLAAAYVAGVTKVFTVGGAQAIAALAYGTETIPQVDKITGPGNAFVA
                     AAKRRVFGVVGIDMVAGPSEILVIADGTTPADWVAMDLFSQAEHDEIAQAILIGTSQA
                     YLDEVEAAMDRLIETMPRRDIIEASLGNRGAMILVKDLNEACEISNYISPEHLELSVE
                     NPQEWAKKIRHAGAIFMGRYTGESLGDYCAGPNHVLPTSRTARFSSPLGTYDFQKRSS
                     LIQVSEQGAQKLGETASVLAHGESLTAHARAAEFRMK"
     gene            complement(16138..17025)
                     /locus_tag="ACFJAG_001062"
     CDS             complement(16138..17025)
                     /locus_tag="ACFJAG_001062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease"
                     /protein_id="HFC3980365.1"
                     /translation="MVAKIKKFSDSTLSVLNNGERRFYVYCLTDLKKDKILYIGKGCG
                     NRIFEHEWVASRSQDPVSGEIIDRKLKAISKCKKLGRYIISYHLTEVEALAAESALIH
                     FVKSVLGKKLKNKIAGHGPGGISVEELDRRFGFSSLPLSEINPDGLILAIKIHNAFDL
                     DTDEELDYLFDNQDDANLKSRTLGNWVIGKDVASKVKYVIGVHTGLQNAVVSAYEVDG
                     FETMTEETKNGRKQTRYRFRTTSRSEEVLAKLGLQQKCLPELKFGSGGGKAYIRPKTE
                     QETLQTIPSPKITKENPKS"
     gene            complement(17117..17782)
                     /gene="hisG"
                     /locus_tag="ACFJAG_001063"
     CDS             complement(17117..17782)
                     /gene="hisG"
                     /locus_tag="ACFJAG_001063"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003879 - ATP phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HFC3980366.1"
                     /translation="MQDNALTIALSKGRIFEETLPLLAAAGIAPTEEPEKSRKLIIGT
                     NHENIRLVIVRATDVPTYVRYGAADFGIAGKDVLIEHGGTGLYRPLDLEIAKCRMMVA
                     VRKGFDYEAASQPGCRLKIATKYPEIAASHFAGKGVHVDIIKLYGSMELAPLVGLSDA
                     IVDLVSTGNTLKANGLEAVEHIVDISSYLVVNKAALKTKYALLEPIIQSFGGAVKAKW
                     AFI"
     gene            complement(17861..18514)
                     /locus_tag="ACFJAG_001064"
     CDS             complement(17861..18514)
                     /locus_tag="ACFJAG_001064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HFC3980367.1"
                     /translation="MFSVPRSFLPGVFVLAALAACKPQDNSAAQAASSSASAPAAENA
                     AKPQTRGTDMRKEDIGGDFTLTDGEGKPFSLSDLKGKVVILSFGFTHCPDVCPTELLT
                     YSDTLKQLGGQAKDVKVVFVSIDPERDTPEIIGKYAKQFNPDFIGLTATGGQNLPVIK
                     QQYRVVSAKINQKDDSENYLVDHSSGAYLIDKNGEVAIFSPYGSEPETIAADVRTLL"
     gene            18790..18874
                     /locus_tag="ACFJAG_001065"
     tRNA            18790..18874
                     /locus_tag="ACFJAG_001065"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:18824..18826,aa:Leu,seq:caa)
     gene            complement(18937..19044)
                     /locus_tag="ACFJAG_001066"
                     /pseudo
     CDS             complement(18937..19044)
                     /locus_tag="ACFJAG_001066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
BASE COUNT         4323 a         4653 c         5294 g         4855 t
ORIGIN      
        1 actataaaaa ttaactttat tctctaaggt tgacaatttt tcaaatacca aacttgtatc
       61 aaggatgggc aattctatag ttaaacctat ttcttttgcg agaatattta attgtttgtc
      121 aattaaccat cgacggacaa taggagttgc aatgctacgt acatatcttg gaggaagagc
      181 atctacacga attagtgttt cttttaaagt tgatatatcc tcttctaaaa gtttttgtaa
      241 ctctgtttta gtattcattc taacaatcca aaatataagc catttgaaca agactcaaat
      301 ggcttattaa gatttaaatt taacttaatt tctgacaaag ccaaccttcc gcgcttgcca
      361 gcatttcggg caatttgtcg gcatccgtac cgccggcttg cgccaagtcg ggacggccgc
      421 cgcctttgcc gccgacttgt tcggctgcaa atttaaccag atctcctgct ttgacttttc
      481 cggtcagggc tttggatacg ccggcgcaca gggagacttt accctcgttt actgccgcta
      541 aaagaatcac ggcgttgtcg gattttccgg tcaggtcggt tacggtttcg cgcagggcgg
      601 ctgcgtcggc ttcgatttgt gcggcaacga gtttggccgc gcccaggtct tttgcgtcgt
      661 ccaagagttt ggcgcctgcg tggacggcga gttcggcttt ggcgcgtgcc aattcttttt
      721 ccaatgcttt ggcgtgtgcc gcgcctgctt ggattttcgc cagtacgtct ttttcggttt
      781 gggctttggt ttcggcaatg atgtctttta ccaaacgctc ttgctcttgc gcccatttga
      841 gtgcgttcag gccggtgatg gcttcgatac ggcgtacgcc tgcggcaata ccgccttcgc
      901 tgatgatttt gaagaggccg atgtcgccgg tgcgtgaaac gtgtgtgccg ccgcacaatt
      961 cggtagagaa accgcccatt tgcagtacgc gtacttcgtc gccgtatttt tcgccgaaga
     1021 gcatcatggc gtcggttttt tgcgcgtctt ccatgctcat aatggctgcg ttgacggcaa
     1081 cgttggctaa aacggcttcg ttgacgcggc gttcgacttc ggcgatttct tcggcagtta
     1141 ccgcttgggg atgggaaatg tcgaaacggg tggattcggc ggtaaccaaa gagccttttt
     1201 gttcgacgtg tccgcccaat acgtcgcgca gggctttgtg catcaggtgg gtcgcgctgt
     1261 ggttgcgcat attggcattg cggatttcgt catccacttt ggcggtaatg ctgtcgccga
     1321 ctttcagacg gcctgaagtt tgtacgccga attgtccgaa tacggccgct ttgatttttt
     1381 gggtatcgcg tacttcaaag cggttttcgc ctgcgaagat atagccgacg tcgccgactt
     1441 ggccgccgga ttctgcatag aacggggtaa agtcgataac gacggcaccg ctgtcgcctt
     1501 cgttcaattc gacgacttgc ccgccgtctt tgtagagggc gaggactttg gattcggttt
     1561 ggcgttcgct ataaccttta aactcggtgt cttgaccgtc gtaaggcagt tgggcgttgg
     1621 ctttgaagct ttgggcggcg cgtgcgcgtg cgcgttgggc ttccatttcg cgctcgaagc
     1681 ctgcttcgtc cggttcgata ttgcgttcgc ggcagatgtc ggcagtcagg tcgtatggga
     1741 agccgtaggt atcgtagagt ttgaagataa tttcgccgcc gagtgttttg ccgcctttgg
     1801 ccagcgcgtt ttccaacaaa gccataccgg tttccagagt ttgggcaaaa cggctttctt
     1861 cgtttttcaa agcttcttcg atttgcgcct gtttttcttt caattcagga tacgcgccgc
     1921 ccatctcttg aaccaaatcg gcaacgagtt tgtggaagaa cggtttgctt tgacccagtt
     1981 tgtaaccgtg gcgcacggcg cggcggatga tgcggcgcaa tacgtagccg cgtccttcgt
     2041 tggaaggcaa tacgccgtct gcaatcagga atgagcagga gcggatgtgg tcggcgataa
     2101 ctttcaggct gggttcttcc atactgaacg gcgcgccggt ttcgcgggca acggctttga
     2161 gcaggtcttg gaacaggtcg atttcgtagt tgctgtggac gtgctgcatc acggcggcca
     2221 tacgttccaa gcccataccg gtatcgacgg acggcttggg cagtggattc atattgcctt
     2281 gttcgtcgcg gttgaactgc atgaatacgc agttccaaat ttcaatccag cggtcgccgt
     2341 cttcttcggg gctgccggga atgccgcccc agatttcttt gccgtggtcg tagaaaattt
     2401 cggagcaggg gccgcaaggg ccggtgtcgc ccatttgcca gaagttgtcg gacgcgtatt
     2461 tcgcgccttt gttgtcgccg atgcggacga tgcgttcaga cggcataccg atttcgttca
     2521 accagatgtt gtaggcttcg tcgtcttctg cgtaaacggt cgccaagagt ttgtctttgg
     2581 ggatgttgag ccattcgggg gaagtgagaa actcccaagc gaagtggatc gcgtcgcgtt
     2641 tgaagtaatc gccgaaggag aagttgccca tcatttcaaa gaaggtgtgg tggcgggcgg
     2701 tgtagccgac gttttccaag tcgttgtgct tgccgcctgc gcgtacacat ttttgcgcgg
     2761 tggtggcgcg gctgtacggg cgtttgtcga aacctaaaaa tacgtcttta aactggttca
     2821 tgcctgcgtt ggtaaacagc agggtcgggt cgtcgtgcgg cacgaggctg gaagagcgga
     2881 cgacggtgtg gcctttggtt tcaaaaaatt ttaggaattt ttggcgcagt tcggaggttt
     2941 tcataatttt ttcaatgtct ctcaaatgtc ttgtcatggt aaaagcaggg aaaacgaacg
     3001 gcggtatatt accgcaaatc cctgtttcta gctatggaag cggcggcttt cagacggcat
     3061 tgcgggattt tgaatgccgt ctgaagccct gttaccaata tcggctataa tggccgcttt
     3121 ctccaacccg atatgcaagg aatgataatg gtcaaacatc tgccactcgc cgtcctgact
     3181 gctttgctgc ttgcagcgtg cggcggttcg gacaaaccgc ctgccgaaaa accggcaccg
     3241 gcggaaaacc aaaacgtatt gaaaatttat aactggtcgg aatacgtcga tccggaaacc
     3301 gttgccgatt ttgaaaagaa aaacggcatc aaggttactt atgatgtgta cgacagtgat
     3361 gaaacgctgg aaagcaaggt gctgaccgga aaatccggtt acgacattgt cgcgccgtcc
     3421 aatgcgtttg tgggcaggca gattaaggca ggtgcgtatc agaaaatcga taagtcgatg
     3481 attcccaatt ataaacatct caaccctgaa atgatgaggc tgatggacgg ggtcgatccc
     3541 gaccacgaat acgccgtgcc gttttattgg gggacaaata ccttcgccat caataccgaa
     3601 cgcgtgaaaa aggctttggg tacggacaag ctgccggaca accagtggga tttggtgttc
     3661 aaccccgaat acacgttcaa actcaaacaa tgcggcatca gctatttgga cagcgcggcg
     3721 gaaatttatc ccatggtgtt gaactatttg ggcaaaaacc cgaacagcag caatacggaa
     3781 gacatcaggg aggcaaccgc cctgctcaag aaaaaccgcc ccaatatcaa acgctttact
     3841 tcgtccggct ttatcgatga tttggcgcgc ggcgatacct gcgtaacaat cggtttcggc
     3901 ggagatttga acatcgccaa acgccgtgcc gaagaagcgg gcggcaagga aaaaatccgc
     3961 gtgatgatgc cgaaagaggg cgtggggatt tgggtggatt ctttcgtgat tccgaaagat
     4021 gcgaaaaacg tcgccaacgc gcacaaatac atcaacgact tcctcgatcc ggaagtgtcg
     4081 gcgaaaaacg gcaatttcgt tacctacgcg ccttcgagca agccggcgcg cgatttgatg
     4141 gaggacgaat ttaaaaacga caatacgatt ttcccgagcg gggaagattt gaaaaacagc
     4201 tttatcatgg tgcctatccg gccggcggca ttgaagttta tggtgcgcca gtggcaggat
     4261 gtgaaggcgg ggaaataaag cccgatatgc cgtctgaagg atgttcggac ggcatttttt
     4321 atctttggcg gaagagggct tgcagccgct gtttgaaggc aatggggcgg atgctgctca
     4381 aaatgccgct gaggataatg atgcacatac cgagtatttc ctgccagaaa agctcttcgc
     4441 ccagaaaaaa tgcggcagac agggcggaaa agacgacggt catataggaa agcgaggcaa
     4501 ccgtgaattt gtcgccgact ttgtaggcgc gcgtcatcga cagttgggca atcagcgcgg
     4561 acacgccgat gcccgacaga taaaccgccg atggaaagga cagggtgtgc cagccggtca
     4621 gcgtcgccca aaccgacgac atcgccacgc cggttgcgga aaggtaaaag acgacgcgcc
     4681 agccgggttc gcccgccaaa gacagttcgc gcactttcaa atacgcccag ccggacatcg
     4741 cgccgcccgc cagcccggcg agtgccgccg gttcctgacc gctgcggaac gagggattaa
     4801 gcagcaatac cacgccggca aaaccaagga gcagcaccgc ctgcgtgtaa acggaaatcc
     4861 gttctttcaa aatcaggaag gaaaataccg ccaaaaaaat cgacgaggtg taactcaggg
     4921 taacgccggt tgtcaaaggc agatgcgtta ccgcgtaaaa cagcagcagc atcgcccccg
     4981 tcccgaccat actgcggttt aagtggtttt tccaatgggg cgtgcggaag gtgtcgcgcc
     5041 gcaatacggc ggcagcaccg agcgtaacgg ttgaaaacag catgcgccaa aagaccaatt
     5101 cgccgctgcc gagggcaaat tttgccgatg cctctttaat caatacgttc ataacggtga
     5161 agcaggccgc cgccaccagc atccagcccg atcctaaaat gtcttttttt gcggtatcca
     5221 taaacggtcg ttgcgataag gacggtcgga ttgtaaacct tgcggcaagg cttgtggaat
     5281 gtgtttttgc ctgcttctga tgccgaaatt ttatttttct tgccgaacaa tttgttttct
     5341 caaggcaaac ttgattataa tggcgggtat gaaaaaatac cttatccctc tttccattgc
     5401 ggcagtcctt tccggctgcc agtctattta tgtgcccaca ttgacggaaa tccccgtgaa
     5461 tcctatcaat accgtcaaaa cggaagcacc tgcaaaaggt tttcgcctcg ccccttcgca
     5521 ttgggcggat gttgccaaaa tcagcgatga agcgacgcgc ttgggctatc aggtgggtat
     5581 cggtaaaatg accaaggttc aggcggcgca atatctgaac aacttcagaa aacgcctggt
     5641 cggacgcaat gccgtcgatg acagtatgta tgaaatctac ctgcgttcgg cggtagacag
     5701 ccagcgcggc gaaatcaata cggaacagtc caagctgtat atcgagaatg ccttgcgcgg
     5761 ctggcagcag cgttggaaaa atatggatgc caaacccgat aatcccgcat ttaccaactt
     5821 tttgatggaa gtgatgaaga tgcagccctt gaaatgacgc ggtacgcaaa tgccgtctga
     5881 aagctttttc agacggcatt tgcgtttgaa gccccgattt atttttgccc gccttctttc
     5941 cggtattgcc ccggcgaaac gtgatattgc cgtttgaacg ccttgccgaa atgcgtttcc
     6001 gactgaaagc ccaccgacag cgcgacctcc aaaaccgaat ccggggtttt cttcagcagc
     6061 aatgcgcctt tttgcaggcg gatatggttc acaaaggcgt gcgggctgag tccgacttgg
     6121 cttttgaagc ggcgcatcag ttgcgcgcgc gacatattgg cggcggcaac cattttgtca
     6181 atattccatt cgtcttccgg tttgtctatc accttttgga tcaaatgtcc caaacgtttg
     6241 tcctgccaac ctttcaatac gcccgagagt tcgacatcct tatcctgttc gagataggcg
     6301 cgcaggataa gcaccagcag gacggacggt aatgcgttga ccacggaaac cgtccccgtc
     6361 aaaggttttt cgctttccag ttgcagcatt gaaaccacat actgcaaact tggatgggca
     6421 atgttcagaa aaacggtttc cggcagcccg ttcatcaaat cggcgtgggt gtcgtagcgg
     6481 aaacgggcgc aaaacaggct catatccagc ccgttgccgc actgtttgac cataaatgtg
     6541 ccgttttgcc gtatgtccgg ttgtaaactt tctccgtatt ttccgtcgtg gctcaacaca
     6601 tgacccaagc cgcgcgggaa aaatacaata tcgcccgtgc cgaccggacg cggggaagtt
     6661 tcgccgtcga tgcagagata accgctgccc gccgtaacaa tgtgtaccag cccttcgcat
     6721 tgcaaggttt catgccgtac cgaccattgt ccgcccaaaa ggcactgcac atccgcactg
     6781 cccgtcaatt gggcgagatc gaccagtttg tccagaatgt ccataaatct ttttgaacca
     6841 taaaatgaga tgattaaacg agaaacacaa ctgaataatt gcaataatac gcacatcaaa
     6901 aacagatacg caagcgcgta tcagggttaa acgcaagaga aaggaaaaga aaatgtttaa
     6961 agattggaaa gaacataccg cattggttaa aaaatcattc ggcgagctgg gtaaggcgca
     7021 tcctaaaatg ctgcaagcct acggcgcatt ggaacaggcc gccgccgccg aagcactcga
     7081 tgccaaaacg cgcgaactga ttgccatcgc cgttgccatc accacccgtt gcgagagctg
     7141 catcagcgtt cacgccgccg ccgccgccaa agccggtgcg accgacagcg agatcgcagg
     7201 tgcattggca accgccattg ccctgaatgc gggtgctgct tacacttacg ccctgcgtgc
     7261 attggaagcg gttgaaacgc aaaaataatc cgtttcggat aagaaatgcc gtctgaaaat
     7321 atttcagacg gcattttgcc tgttatgctt cccgatattt tgcagacaac atatgcagcc
     7381 gtttttttca gacggcattt gagaaacatg gaacaagtat gaaatatcac cgcttggcat
     7441 tgtttgccgc cataagctgc ctgttgttgt ccgccgtttt tattgcacct tacctgacgg
     7501 catttcacga acaagaaaaa atatttgaat atgcggattt gaccgttacc gcccccaacc
     7561 gcagcggacg ggcaatcaaa ttggaggcgg acgggcggca gtaccggctt tcctgctacg
     7621 ggttcgacag tttgtgcaca ggcggcaata tcggcagagc catcagggcg cggcaggtta
     7681 agattgtttt aagcgaaacc gtcggcaaag gttttttaaa cggcgttctg ttggaatacc
     7741 gcaacagtgg cagtgtctat agcaataaag atttttcccg cacggaagac cgccttgtcg
     7801 aagtgttggc acaacctgcc gttttcagcc tgaaaccggg tattttgctt ttattgcccg
     7861 ccattttcct gcgtttgaaa aaaatgtgaa aacagattgg cggggcgggg gaatgactat
     7921 gcggcaattt tacgttttgg gttatgagga taaccgttat aatcataatt ttacagtccg
     7981 cacagagaaa accgatgcct tggaacatcc ccatcttcct cacatggttg agggtcttgc
     8041 tcattcccgt actgattgtc cttttctacc tgccgttctc atggttttca gaagaagcag
     8101 tcaatgttgc cgccgccgtc atttttgccg ttgccgcctt gaccgactgg tttgacggat
     8161 ttttggcaag gttgtggaaa cagacttccg atttcggcgc attcctcgac cccgtcgccg
     8221 acaagctgat ggttgccgta tcgctgctgc tgctggtcaa actcgaccgg acctatgttt
     8281 tgttcgcgat gattatcatc ggcagggaaa ttaccatttc cgcattgcgc gaatggatgg
     8341 cgcaaatggg aaaaaggagc agcgttgccg tcgccgccgt cggcaagttc aaaaccgccg
     8401 cgcaaatgct ggcgattttc tttttgctgc tgaattttcc cgatttttac ggatttaatc
     8461 ttgttgttat cggcaacata ttgatgttta tcgcatcttt gctgacagtc tggtcgatgc
     8521 tgtattatct gaaaatggcg tggaaagaaa ttgcctgaaa aaaacataaa aatagcttga
     8581 cggtaaaaac ataatccata ataattgcgt cttcttcgat gtcggagagt gaaatcgggc
     8641 gggaatagct cagttggtag agcgcaacct tgccaaggtt gaggtcgcga gttcgagact
     8701 cgtttcccgc tccaaaaatt tcattcttcc gtaatcattg cgggaatagc tcagttggta
     8761 gagcgcaacc ttgccaaggt tgaggtcgcg agttcgagac tcgtttcccg ctccaagttt
     8821 tgtagacaag ccagttttag ggcgagatag caaagtggtt atgcagcgga ttgcaaatcc
     8881 gtctacgccg gttcgattcc gactctcgcc tccatatatc ttacggcggg gtggcagagt
     8941 gtttatgcta tgaggggtgc aaccttcata taggccggtt aaaatccgcg cccccgcctc
     9001 cacctttcac aaatgcccgg gtggtgaaat aggtagacac aacggactta aaatccgtcg
     9061 ggactaaaca tcccatgccg gttcgattcc ggctccgggc accaagctga aaatgacaat
     9121 gccgctccaa gcggttattt ttttatctgt cggatgggga tggacaatat tgatatgttc
     9181 atgcctgaac aagaggaaat ccaatcaatg tggaaagaaa ttttactgaa ttacggtatt
     9241 ttcctgctcg aactgcttac cgtgttcggc gcaattgcgc tgattgtgtt ggctatcgta
     9301 cagagtaaga aacagtcgga aagcggcagt gtcgtactga cagatttttc ggaaaattat
     9361 aaaaaacagc ggcaatcgtt tgaaacattc tttttaagcg aggaagagac aaaacatcag
     9421 gaaaaaaaag aaaagaaaaa ggaaaaggcg gaagccaaag cagagaaaaa gcgtttgaag
     9481 gagggcgggg agaaatctgc cgaaacgcaa aaatcccgcc tttttgtgtt ggattttgac
     9541 ggcgatttgt atgcacacgc cgtagaatcc ttgcgtcatg agattacggc ggtgcttttg
     9601 attgccaagc ctgaagatga ggttctgctc agattggaaa gtccgggcgg cgtggttcac
     9661 ggttacggtt tggcggcttc gcagcttagg cgtttgcgcg aacgcaatat tccgctgacc
     9721 gtcgccgtcg ataaggtcgc ggcaagcggc ggctatatga tggcgtgtgt ggcggataaa
     9781 attgtttccg ctccgtttgc gattatcggt tcggtgggtg tggtggcgga agtgccgaat
     9841 atccaccgcc tgttgaaaaa acatgatatt gatgtggatg tgatgacggc gggcgaattt
     9901 aagcgcacgg ttacttttat gggtgaaaat acggaaaagg gcaaacagaa attccggcag
     9961 gaactggagg aaacgcatca gttgttcaag cagtttgtca gtgaaaaccg ccccgggttg
    10021 gatattgaaa aaatagcgac gggcgagcat tggttcggcc ggcaggcgtt ggcgttgaac
    10081 ttgattgacg agatttcgac cagtgatgat ttgttgttga aagcgtttga aaacaaacag
    10141 gttatcgaag tgaaatatca ggagaagcga agcctgatcc agcgcattgg tttgcaggcg
    10201 gaagcttccg ttgaaaagtt gtttgccaaa cttgtcaacc ggcgagcgga tgtgatgtag
    10261 tttgccgaac ggatggaaat gccgtctgaa gtgtgttcag acggcatttt tcaagttccg
    10321 gctttgatgt tccgttccga ccactctatc cgttgtccga tgtctttcaa attggaatat
    10381 tgttcgacca atcgcggcac atcgtccaaa ctcatggcaa acatccacag ataagtgccg
    10441 accgaataaa tatgccccgc gctgccgtag cctttgagcg tcatcatcac aaaagcaaag
    10501 ccgaacaaaa tacccatcgc cgcgccgacg cagagatagc cgaaggcttc gcggttggaa
    10561 atcagcacac gcaggcgcga aaccagtccg taatggcggt acagctgccg ctcgtcgcct
    10621 tttcggataa agtggttgtc gcgttccaag ctgttgttca ggcggaaata caggttttcg
    10681 ctgatggcgg caaaacgtgg caaaagccat aaaaacaacg caagtatgcc caccgccgac
    10741 acgccgaccc aaaattccag caccagcagc atgatgcacg cgccgaatat ggatacgacg
    10801 gatgtcgcgg caatcggcag gtgttcttca aaaaagctga caaattcacg cgacagggca
    10861 acccgtgcag ttaccgctga atgcgggact tgccgctgcc gttgttccaa cacaaccggc
    10921 acggcgattt cggtataaat ccgcgtaaac gtgcgcgtat cggcaatccg ccgtgccgca
    10981 ccgaccagcc gcatcaaaaa tacaaccaaa gcgtacagca acgcctgcca caccctcccc
    11041 gcaatcacgg cattaatcgc ccagccgcca aacaccggat accccagcat caaaaggttt
    11101 tccagtccga ccggggaaaa tgtgccaatc aatcgcttgc ggtgggtttt ggctatgtgt
    11161 ttcaacattt tccacatatt tgtccctcta ttttttattt tccgagattg ttttttccat
    11221 cacttccgcc agtgcatcca aatcggcaaa cagccgggtt gtgcgcttgt cgccgaatgt
    11281 ggaaaatact ttgtcgctga attcctgcgc gttttctgtt aaaggtgcgg catggacttt
    11341 gcctttttcg gtcagcgaca gcaaccgttc gcgcctgtcc tgttcgcctt cctgccattc
    11401 aatcaaccct tgtccggcaa gggttttgca tacgcctgaa acggtctgtt tgggcagact
    11461 ccactcttct ccgatgtgct tttgcgtgcg gctgccttcg gttgccaggg tataaagtac
    11521 ggtaaagagg ttgtaattca aatcctgctg cccgatccat ttgtcaaaga cattgcaaat
    11581 caggttgata cggattccaa gttggtcgag tcggttcata attggtcttg atattgacta
    11641 aatttgtgcg gattatagtg gattaacaaa aaccggtacg gcgttgcctc gccttgtcgt
    11701 actatttgta ctgtctgcgg cttcgtcgcc ttgtcctgat ttttgttaat ccactatata
    11761 gtcataatcg ggactgattt caagcgtggg gcgataaaaa tgccgtctga aacgctttct
    11821 ggcttcagac ggcatattgt ttggaaaggg aagtcagtgt tctgccaatt tcaggtaaac
    11881 gccggaaacg tcctgttcgc cgtagccggc ttcaactgct ttgcggtagc tggcagcaac
    11941 ggtttcgacg gcgggcaggg tgttgcctgc ctgttcaagc tctttgacgg cgaggttaag
    12001 gtctttggaa gcgtgtttga gtgcaaaggc aggggggaac tcacggtttg cccatagtga
    12061 tttttttgtt tgaaacatag gcgagtccat tgccgagccg ccgatggctt cgacgatggt
    12121 gtcggtatcg atgccgaact gccgcgccat cagcatcgct tcgctgtacg cttcgccgaa
    12181 aatgcctaag agcgagttca agacgagttt cgcgcccgag cctttgccga catcgccgaa
    12241 atggaaggtt tttttgccga caagggaaaa tattttttgc agcgggttta aaacggcttc
    12301 gctgccgccg aacagaatca gcagtgtgcc gttggtggcg ggtccgaccg atccggaaac
    12361 gggtgcttcg gcaaactgtc cgcctgcggc ttcgacaagt gctttgacgg cgaggttttc
    12421 ggtcggggag atggtgctca tgttgacgat gattttgccg gccaatccgt cgcggactcc
    12481 gttcaggatg tcgcacacgg cggcatagtc ggaaaccatc aggaaaatga cggggcaggc
    12541 gcggacgagt tcggcggtgc tgccgtaaac ttttgctcct ttggcggaga tgggggcagt
    12601 tttgtcgggc gagcggttgt atacgccgac ttcgatgccg ccgtccaaga gccgcgttac
    12661 cataggcaga cccatttgcc ctaagcctac ccagccgatt tgtgtgtatg tttctgcgga
    12721 catagtgttt ctcctttgtt ggggcgctgt aatgccgtct gaaggcttcc tgcgcttcag
    12781 acggtctgtt tggggatgtt atgcggtcag cgtgcctttg gtcgaggggg tttgcccagc
    12841 cattctcggg tcgtgttcga ctgccatacg cagggcgcgc ccgaaggctt tgaatacggt
    12901 ttccgcctga tggtgggcgt ttttgccgct gaggttgtcg atgtgcaggg tcatcatgct
    12961 gtggttgacg atgccgtgga aaaattcttc aaacaaatcg acatcgaaac gtccgattag
    13021 tgcgcgggta aattcgatgt tgtacacgag tccggggcgg ccggaaaggt cgatgacgac
    13081 gcggctgagg gcttcgtcga gcgggacgta ggaatgtccg taacggcgga tgcctttttt
    13141 gtcgccgagt gcctgccgga ttgcttgtcc gagtgtgatg ccgatgtctt cggcggtgtg
    13201 gtggtcgtcg atgtgcaggt cgcctttgca gctgatgtcg atgtcaatca tgccgtggcg
    13261 ggcgatttgg tcgatcatgt gttcgaggaa gggaacgccg gtatccagcc tgcttttgcc
    13321 gctgccgtcg aggttgatgg agacggtgat ttgggtttcg caggtattgc ggttgacggt
    13381 aacgctgcgg cagccggcag cagatgcggt ttcggcaatt cgggtttcgg cagttccggt
    13441 gctttctgcg gcggtttcgg ggacagtgcg ttcgcggtgt tttctgtcga gccagccttt
    13501 gggtttgccg gtgtgttttt cgagttttgc catcaggctg ggacggatgc cgcgcgcatc
    13561 ggggtcttct gcctgctttt caaggcgttg tttgagtttg taaagtgcga cgggggtacg
    13621 gtagccgcag agtttggcaa gcttgggcag cgaacctgct tcttgggcga gagtcaggaa
    13681 gttgttcagg tggagttgtg tcttggtcat agggattccg tttggtttat cggtagagcc
    13741 ggcggataac gtcgaggacg gcatcgtttt gtgcggagct gcctatggta atgcgcaggc
    13801 agtgttccaa aagcggatgt gcgccgtgca gttttttgac gaggatgcgg ttttgtttga
    13861 gtgtgtcaaa caacaaatcg gcatcgggta cgcgtatggt aatgaagttt gcctgacttg
    13921 gaaaggcgtt cagacggcat attttgccca attcggcgaa catccgttcg cgttcgtttt
    13981 tcaggctgtc gatgttggca gaaatgatgc cgtagtgttg cagggcgagt ttggcggtgg
    14041 tcaggctcag ttggttcata ttgtagggcg gcaggatttt ttgcagttcg ccgatgactt
    14101 cgggacagcc tgtcgcataa ccgatacgca gtccggcaaa accgattttg ctgagggtgc
    14161 gtaagactat caggttggga atcctgcccg cctgcggcag gaagctgtcg ccgttgaatg
    14221 cgccgtaggc ttcgtcgacg acgacgatgc cgtctgaagc ttcgatggcg gcttcgattt
    14281 cggcacgcgt gaaacatacg ccggtcgggt tgttcgggta ggcgataaag gtcagggcag
    14341 ggcggtgctt cctgacggct tcgaggacgg cgggcaggtt gagggtgaaa tctccgttca
    14401 gtggaacgcc gacataatcc atgccgtaca gcgcggcgtt gtggcggtac atgatgaaac
    14461 cgggttcggc tgccaacatt gccgcgccgg gtttggcggt cagcatggtg atgaactgta
    14521 tcagttcgtc cgaaccgttg cctaaggcga cggcggcgca gtcagggatg tcgaacgccg
    14581 aacgcaatgc ttcctgcaaa ccgcagccgg aggggttggg atagaggtgg atgggggcgg
    14641 atgccagttg cgcccgccat tcccgcatca gggcttcgtg cccctcaaaa ggatgggcgg
    14701 ggctttccat cgcatcgagt ttggcaaaac cgggcggaac atcggtgatt ttgtatgcgg
    14761 acatggcgag gatgtcgttg cggatgaagg agcggacgga tttcatcgtg tttccttaat
    14821 ggttggaata tgcctgtacg ccgtttcggc attatttcat acggaactct gccgcgcgtg
    14881 cgtgggcggt caggctttcg ccgtgtgcca gcacgctggc ggtttcgcct aatttttgcg
    14941 cgccctgttc cgaaacctga atcaggctgg agcgtttttg gaaatcatat gtccccaaag
    15001 gcgaggaaaa gcgggcggtt cggctggtgg gcaacacatg gttcgggccg gcgcagtagt
    15061 cgccgaggct ttcgccggtg tagcgtccca tgaaaatcgc gccggcatgg cggatttttt
    15121 tcgcccattc ctgcgggttt tcgactgaca gttccaagtg ttcgggggaa atgtagttgg
    15181 agatttcgca ggcttcgttc aagtctttaa cgagtatcat cgcgcccctg ttgccgagcg
    15241 aggcctcgat gatgtcgcgg cgcggcatgg tttcgatgag cctgtccata gcggcttcta
    15301 cttcgtcgag atacgcttgc gacgtgccga tgaggatggc ttgggcaatt tcgtcgtgtt
    15361 cggcctggct gaacaaatcc atcgccaccc aatcggcggg tgtcgtgccg tcggcgatga
    15421 ccagtatttc agacggcccc gccaccatgt cgatgccgac cacgccgaac acgcggcgtt
    15481 tggcggcggc gacgaaggcg ttgcccggac cggtgatttt atcgacttgg gggatggttt
    15541 ccgtgccgta ggcgagggcg gcgatggctt gcgcgccgcc gacggtgaag actttggtta
    15601 cgccggcgac gtatgcggcg gcaagcacga tgtcgttgcg ttcgcctttc ggtgtcggta
    15661 cgaccataat gatttctttc acgcctgcga cgtgggcggg catcgcgttc atgatgacgg
    15721 aactcggata tgccgccttg ccgcctggga cgtaaatgcc gacgcggtca agcggggtaa
    15781 tctgttgccc cagcagcgtg ccgtcttcat cggtgtagct ccacgattcc attttttggc
    15841 gttggtggta gctttcgaca cggcgggcgg cggtctgcaa tgctgtctga acgtcgttcg
    15901 gaatgcgctc gaacgccgcg ttcaaatcgg cttgcgtgag tattaaatca tcgatgcttt
    15961 tagcgtttgt ctgatcgaat ttgttggtgt attcaatcaa agccgcatcg ccgcgctttt
    16021 gcacgtcggc gcaaatgtcg gcgacgatgc gttcggtttc ggggttttgc gcggtttcaa
    16081 aagccagcag ggctttgagt ccggcttgga aatcgggcga ttgggtgttg agttttttca
    16141 tgatttggga ttctcctttg ttattttggg acttgggatc gtctgaagcg tctcttgctc
    16201 ggttttgggt ctgatatacg cttttcctcc cccgctacca aacttcaatt cgggcaggca
    16261 tttttgttgc agaccgagtt tggctaatac ctcttcgcta cgagaggtag tacggaaacg
    16321 gtaacgggtt tgttttctgc cgtttttggt ttcctcagtc attgtttcaa aaccgtccac
    16381 ttcgtacgca ctgacaacag cgttttgcag accggtgtga acgccgataa cgtatttcac
    16441 ttttgatgca acatctttac cgataaccca gttgcccaac gtacgcgatt tgaggttggc
    16501 atcgtcttgg ttgtcgaaaa ggtagtctaa ttcttcgtca gtatctaaat cgaaagcatt
    16561 gtggatcttg atggcgagaa tcagcccgtc ggggttaatc tcgctaagtg ggagagaaga
    16621 gaatccaaag cggcgatcta gttcttctac gctaatacca cccggaccat gcccggcaat
    16681 tttatttttg agttttttac ccaagacaga tttaacaaaa tgaattaagg cagattcggc
    16741 ggcgagcgct tcgacttcag tcagatgata gctgatgata tagcgaccga gtttcttgca
    16801 tttggagatg gctttgagtt tccgatcgat aatctcgccg gagactgggt cttgtgaacg
    16861 actagcaacc cattcatgct cgaagatacg attaccgcaa ccttttccga tgtagaggat
    16921 tttgtctttt ttcaggtcgg tcagacaata gacataaaac cgacgctcgc cgttattcaa
    16981 aacggaaagg gtcgaatctg agaatttttt tatttttgca accattttaa cttctcctat
    17041 acagtttact gccggtgata ttttcagacg gcctgtcggc gggaacggat agggtcgtct
    17101 gaaaacgcat ctttattcaa atgaatgccc acttcgcctt cactgcgccg ccgaacgact
    17161 gaataatcgg ctccagcagc gcgtatttcg ttttcaaagc agccttgttg accaccaggt
    17221 agctggaaat gtcgacgatg tgttcgactg cctccaagcc gtttgccttc aaggtgtttc
    17281 ccgtcgaaac caagtccaca atcgcatcgc tcaagccgac cagcggcgca agttccatcg
    17341 agccgtacag tttgataatg tccacatgga cacccttgcc ggcaaaatga gatgccgcga
    17401 tttcaggata cttcgtggca atcttcagac ggcatccggg ttgcgaagcg gcttcgtaat
    17461 caaacccttt acgcacagca accatcatgc ggcacttggc aatctccaaa tccaaaggtc
    17521 ggtaaagccc cgtgccgccg tgttcgatca gcacgtcttt gcccgcaatg ccgaagtccg
    17581 ccgcgccgta gcggacataa gtcggcacat cggttgcgcg gacaatgaca aggcggatgt
    17641 tttcatggtt cgtcccgata atcagcttgc gcgatttttc gggctcttca gtcggagcaa
    17701 tgccggcagc ggcaagcagc ggcagcgtct cctcaaaaat gcgccctttg gataaggcga
    17761 tggtcaaagc attatcctgc atggtgtgga tgtcctttgt cggttgaaac aataatgccg
    17821 tctgaacagg caccggcggt gcagacggca tacggtttta tcagagcagg gtccttacat
    17881 cggcagcaat cgtttccggc tcgcttccgt aaggcgagaa aatggcaacc tcaccgtttt
    17941 tatcgataag atacgcaccg gaagagtggt cgaccaaata gttttcgctg tcgtcttttt
    18001 gattgatttt ggcagaaacc acgcggtatt gctgcttgat gaccggcagg ttttgaccgc
    18061 ccgttgccgt cagaccgata aagtccggat tgaactgttt ggcatacttg ccgatgattt
    18121 caggcgtgtc gcgttccgga tcgatgctga cgaacaccac tttcacgtcc ttagcctgcc
    18181 cgcccaactg cttcaaagtg tcgctgtacg tcaaaagctc tgtcgggcag acatcgggac
    18241 agtgcgtaaa gccgaaagac agaatcacga ccttgccttt caaatcgctc aggctgaaag
    18301 gcttgccttc gccgtcggtc agcgtgaaat cgccgccgat gtcttcctta cgcatatccg
    18361 taccgcgcgt ttgcggcttt gccgcatttt ccgcagccgg cgcggatgca cttgaagaag
    18421 cggcttgcgc cgcactgttg tcttgaggtt tgcaggcggc aagcgcggca agtacgaaaa
    18481 cgcccggcaa aaaggaacgc ggtacggaaa acatgacaat ctcccaagaa taaatagaaa
    18541 aacctgattc gtacggaatt tgaatatttc catcttaacg cgtttggcag atttaatgta
    18601 gtattttttt acgttgtccg tacggcagga attgccgaat catacagaat ctttggagcg
    18661 gaaagaacag taagattaaa ataataaaaa ttctatttaa aatcaaaaac aaaataaaaa
    18721 cagataaaat aatttcaaaa aaaggtttac agaatctcaa aatccattat aatggcaatt
    18781 tcttcaccag cccaggtggc gaaattggta gacgcagggg actcaaaatc ccccgccgca
    18841 aggtgtgtcg gttcgagtcc gaccctgggc accacaaccg cttttggagc ggttattttt
    18901 ttgtctattg ctgtttaatg aaatagataa gactaaatat agcggattaa atttaaaccg
    18961 gtacggcgtt gcctcgcctt gccgtaccat ctgtactgtc tgcggcttcg tcgttttgtc
    19021 ctgatttaaa tttaatccac tatacaatca atatatttaa gtcgttgtta gccctcttgg
    19081 ttctgtcaat gccgtccaat acagtccggt gcaatgagcc atttt
//
LOCUS       DAXFZM010000036        19065 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.036, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000036 DAXFZM010000000
VERSION     DAXFZM010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19065)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19065)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19065
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.036"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(134..871)
                     /locus_tag="ACFJAG_001067"
     CDS             complement(134..871)
                     /locus_tag="ACFJAG_001067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin family protein"
                     /protein_id="HFC3980368.1"
                     /translation="MALQDRTGQKVPSVVFRTRVGDTWKDVSTDDLFKGKKVVVFSLP
                     GAFTPTCSSSHLPRYNELFGAFKENGVDAICCVSVNDTFVMNAWAAEEESDNIYMIPD
                     GNGEFTEGMGMLVGKEDLGFGKRSWRYSMLVNDGVVEKMFIEPEEPGDPFKVSDADTM
                     LKFVAPDWKAQESVAIFTKPGCQFCAKVKQALQDKGLSYEEIVLGKDATVTSVRAITG
                     KMTAPQVFIGGKYIGGSEDLEAYLAKN"
     gene            complement(1150..3426)
                     /gene="metE"
                     /locus_tag="ACFJAG_001068"
     CDS             complement(1150..3426)
                     /gene="metE"
                     /locus_tag="ACFJAG_001068"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003871 -
                     5-methyltetrahydropteroyltriglutamate-homocysteine
                     S-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HFC3980369.1"
                     /translation="MTTLHFSGFPRVGAFRELKFAQEKYWRKEISEQELLDVAKDLRE
                     KNWKHQAAANADYVAVGDFTFYDHILDLQVATGAIPARFGFDSQNLPLEQFFQLARGN
                     KDQFAIEMTKWFDTNYHYLVPEFHADTEFKANAKHYVQQLQEAQTLGLKAKPTVVGPL
                     TFLWVGKEKGSVEFDRLSLLPKLLPVYVEILTALVEAGAEWIQIDEPALAVDLPKEWV
                     EAYKDVYATLNKVSAKILLGTYFGSVAEHAALLKSLPVDGLHIDLVRAPEQLDAFAGY
                     DKVLSAGVIDGRNIWRANLNKVLETVGPLQAKLGERLWISSSCSLLHTPFDLSVEEKL
                     KANKPDLYSWLAFTLQKTQELRVLKAALNEGRDSVAEELAASQAAADSRANSSEIHRA
                     DVAKRLADLPVNAGQRKSPFADRIKAQQAWLNLPLLPTTNIGSFPQTTEIRQARAAFK
                     KGELSASDYEAAMKKEIALVVEEQEKLDLDVLVHGEAERNDMVEYFGELLSGFAFTQY
                     GWVQSYGSRCVKPPIIFGDVSRPEAMTVAWSTYAQNLTKRPMKGMLTGPVTILQWSFV
                     RNDIPRATVCKQIALALNDEVLDLEKAGIKVIQIDEPAIREGLPLKRADWDAYLNWAG
                     ESFRLSSAGCEDSTQIHTHMCYSEFNDILPAIAAMDADVITIETSRSDMELLAAFGEF
                     KYPNDIGPGVYDIHSPRVPTEAEVEHLLRKAIEVVPVERLWVNPDCGLKTRGWKETLE
                     QLQVMMNVTRKLRAELAK"
     gene            complement(3562..4440)
                     /gene="metF"
                     /locus_tag="ACFJAG_001069"
     CDS             complement(3562..4440)
                     /gene="metF"
                     /locus_tag="ACFJAG_001069"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004489 - methylenetetrahydrofolate
                     reductase (NAD(P)H) activity [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HFC3980370.1"
                     /translation="MNYAKEINALNNSLSDLKGNINVSFEFFPPKNEQMETMLWDSIH
                     RLQTLHPKFVSVTYGANSGERDRTHGIVKRIKQETGLEAAPHLTGIDASHDELRQIAK
                     DYWDSGIRRIVALRGDEPAGYEKKPFYAEDLVKLLRSVADFDISVAAYPEVHPEAKSA
                     QADLINLKRKIDAGANHVITQFFFDVERYLRFRDRCVMLGIDVEIVPGILPVTNFKQL
                     GKMAQVTNVKIPKWLSQMYEGLDDDQGTRNLVAASIAIDMVKVLSREGVKDFHFYTLN
                     RSELTYAICHILGARP"
     gene            4637..4912
                     /locus_tag="ACFJAG_001070"
     CDS             4637..4912
                     /locus_tag="ACFJAG_001070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L31"
                     /protein_id="HFC3980371.1"
                     /translation="MKPNIHPDNYRTVLFFDSSANEGWLIRSCAGTHGKTMVWTDGKE
                     YPLFSLDTSSSSHPVYTGKQRNVNTEGRASKFNQRFQSVMSSFRKDK"
     gene            4912..5037
                     /gene="ykgO"
                     /locus_tag="ACFJAG_001071"
     CDS             4912..5037
                     /gene="ykgO"
                     /locus_tag="ACFJAG_001071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L36"
                     /protein_id="HFC3980372.1"
                     /translation="MQVLSSLKTAKQRHRDCQIVRRRGKVYVICKSNPRFKSRQR"
     gene            complement(5123..5341)
                     /locus_tag="ACFJAG_001072"
     CDS             complement(5123..5341)
                     /locus_tag="ACFJAG_001072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980373.1"
                     /translation="MIGRLFRIFFFFALAALIINRLFSRRQKRVLREVAEISAWVLLG
                     AAAATLFWYLFMLYFKHIPDSYRRKNAV"
     gene            5484..6623
                     /locus_tag="ACFJAG_001073"
     CDS             5484..6623
                     /locus_tag="ACFJAG_001073"
                     /EC_number="2.3.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-acetyltransferase"
                     /protein_id="HFC3980374.1"
                     /translation="MSQNTSVGIVTPQKIPFEMPLVLENGKTLPRFDLMIETYGELNA
                     EKNNAVLICHALSGNHHVAGRHSAEDKYTGWWDNMVGPGKPIDTERFFVVGLNNLGGC
                     DGSSGPLSINPETGREYGADFPMVTVKDWVKSQAALADYLGIEQWAAVVGGSLGGMQA
                     LQWAISYPERVRHALVIASAPKLSTQNIAFNDVARQAILTDPDFNEGHYRSHNTVPAR
                     GLRIARMMGHITYLAEDGLGKKFGRDLRSNGYQYGYSVEFEVESYLRYQGDKFVGRFD
                     ANTYLLMTKALDYFDPAADFGNSLTRAVQDVQAKFFVASFSTDWRFAPERSHELVKAL
                     IAAQKSVQYIEVKSAHGHDAFLMEDEAYMRAVTAYMNNVDKDCRL"
     gene            6620..7201
                     /gene="metW"
                     /locus_tag="ACFJAG_001074"
     CDS             6620..7201
                     /gene="metW"
                     /locus_tag="ACFJAG_001074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine biosynthesis protein MetW"
                     /protein_id="HFC3980375.1"
                     /translation="MNLRDDLQLIYDRIPEGSRVLDLGCGDGELLAALAEHKKCSGYG
                     IEIDTDNVIAAMSRGVNVIQADLEEGLTAFNDQSFDVIVLSQTIQAMQNTEKILRCLM
                     RLAKQAIVSFPNFGYWRNRVQIALGGHMPVSERMPYHWYDTPNIHWCTLKDFDLLCAK
                     NNIRVLERAVMTGNRQVKHFPNLLGSLAFYRVG"
     gene            7318..8115
                     /locus_tag="ACFJAG_001075"
                     /pseudo
     CDS             7318..8115
                     /locus_tag="ACFJAG_001075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213792.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NMB0938 family lipoprotein"
     gene            complement(8295..8855)
                     /gene="efp"
                     /locus_tag="ACFJAG_001076"
     CDS             complement(8295..8855)
                     /gene="efp"
                     /locus_tag="ACFJAG_001076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HFC3980376.1"
                     /translation="MKTAQELRAGNVFMVGNDPMVVQKTEYIKGGRSSAKVSMKLKNL
                     LTGAASETIYKADDKFDVVILSRKNCTYSYFADPMYVFMDEEFNQYEIEADNIGDALK
                     FIVDGMEDQCEVTFYEGNPISVELPTIIVREVEYTEPAVKGDTSGKVMKTARLVGGTE
                     IQVMSYIENGDKVEIDTRTGEFRKRA"
     gene            complement(8898..10049)
                     /gene="earP"
                     /locus_tag="ACFJAG_001077"
     CDS             complement(8898..10049)
                     /gene="earP"
                     /locus_tag="ACFJAG_001077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0106361 - protein-arginine
                     rhamnosyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P maturation arginine
                     rhamnosyltransferase EarP"
                     /protein_id="HFC3980377.1"
                     /translation="MNTYAFPACWIFCKVIDNFGDIGVSWRLARVLHRELGWQVHLWT
                     DDVSALRALCPDLPDVPFVHQDIHVRTWHSDAADIDTAPVPDAVIETFACDLPENVLN
                     IIRRHKPLWLNWEYLSAEESNERLHLMPSPQEGVQKYFWFMGFSEKSGGLIRERDYRE
                     AVRFDTEALRRRLVLPEKNAPEWLLFGYRGDVWAKWLDMWQQAGSLMTLLLAGAQIID
                     SLKQSGVIPQNALQNDGGVFQTASVRLVKIPFVPQQDFDKLLHLADCAVIRGEDSFVR
                     TQLAGKPFFWHIYPQDENVHLDKLHAFWDKAYGFYTPETASVHRLLSDDLNGGEALSA
                     TQRLECWQTLQQHQNGWRQGAEDWSRYLFGQPSASEKLAAFVSKHQKIR"
     gene            complement(10068..10346)
                     /locus_tag="ACFJAG_001078"
     CDS             complement(10068..10346)
                     /locus_tag="ACFJAG_001078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980378.1"
                     /translation="MSRNLLVRWLAVCLIPLATLAVFAANPPEDKPQHLINGIILACE
                     ATFLFKFVLFETIKHHLKQGFDLKRQTMFLFIPIVLLVVYLFHYFGAF"
     gene            10697..11638
                     /gene="miaA"
                     /locus_tag="ACFJAG_001079"
     CDS             10697..11638
                     /gene="miaA"
                     /locus_tag="ACFJAG_001079"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0052381 - tRNA dimethylallyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HFC3980379.1"
                     /translation="MPTPKAFTLLGPTACGKTALALKIAETLPVEIISLDSALLYTGM
                     DIGTAKPSASERAFVPHHLIDIITPVQTYSAARFVEDCTRLTGEITARGKCPLIVGGT
                     MMYFRALTQGLNDLPEADACLRADLDEQKQMYGLDFLYRTLQKVDPETACRLKPNDSQ
                     RIGRALEIYYLTGRPMSAHLNGQPEHTLPFELYTAALIPEDRARLHENIALRFHLMLE
                     QGFIGEVENLRRRYPGLTADSPAIRCVGYRQAWEHLDGATDRQTFIEKGIAATRQLAK
                     RQLTWLRKTPLDCVADPFSDGTSGTRLIEAAKRFFGE"
     gene            11642..12361
                     /gene="tadA"
                     /locus_tag="ACFJAG_001080"
     CDS             11642..12361
                     /gene="tadA"
                     /locus_tag="ACFJAG_001080"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008251 - tRNA-specific adenosine
                     deaminase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0002100 - tRNA wobble adenosine to inosine
                     editing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA adenosine(34) deaminase TadA"
                     /protein_id="HFC3980380.1"
                     /translation="MLATPPLAPKTVAALHRLGIRTLEELRQNGSVKAFLLLKASGLT
                     LTKSTLWQLESLLNGTPPQEMPQAHKDCLLAELKNHPPVAAFPPQEEMGYFMREALRQ
                     AEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGSEMQNYRLD
                     GCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHTAIRG
                     GILQEECRAVLSRFFQNKRKG"
     gene            12366..12854
                     /locus_tag="ACFJAG_001081"
     CDS             12366..12854
                     /locus_tag="ACFJAG_001081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF456 domain-containing protein"
                     /protein_id="HFC3980381.1"
                     /translation="MTALLVILALALIAVGTAGIVYPALPGLALMFAGTWLLAYAGGY
                     QIYGAGILWTVGLISLGGILADYMAGMLGVKYTGAGKLAVRGALAGSIIGIFFSLPGL
                     ILGPFIGAAAGELIDRRNMLQAGKAGLGTLLGLVVGTAFKIGCAVSILFILLVKYIAY
                     LF"
     gene            12920..13672
                     /gene="rlmB"
                     /locus_tag="ACFJAG_001082"
     CDS             12920..13672
                     /gene="rlmB"
                     /locus_tag="ACFJAG_001082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HFC3980382.1"
                     /translation="MANQRPIYGFHAVNARLWQNPKSITELYIQEGKSDARTREVLEK
                     AANENIRVYFADADRLNAISKGARHQGVVGFIDASKNHVHLEDVLENLSEPPLLLILD
                     GITDPHNLGACLRTADAMGVHAVIAPKDKSAGLNATVSKVACGAAETVPYITVTNLAR
                     TLRELKEYGIWIIGTDIGGNADLYHCNLPDSAAWVMGNEGDGMRRLTREHCDMLVSIP
                     MFGTVESMNVSVSAGMVLSETRRQRVLKNKKA"
     gene            complement(13734..15108)
                     /locus_tag="ACFJAG_001083"
                     /pseudo
     CDS             complement(13734..15108)
                     /locus_tag="ACFJAG_001083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223860.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0015205 - nucleobase transmembrane
                     transporter activity [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nucleobase:cation symporter-2 family protein"
     gene            15488..16363
                     /gene="dapA"
                     /locus_tag="ACFJAG_001084"
     CDS             15488..16363
                     /gene="dapA"
                     /locus_tag="ACFJAG_001084"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008840 - 4-hydroxy-tetrahydrodipicolinate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HFC3980383.1"
                     /translation="MLQGSLVALITPMNQDGSIHYDQLRQLIDWHIENGTDGIVAAGT
                     TGESATLSVEEHLSVIEETVKHVAKRVPVIAGTGANNTLEAIALSQAAEKAGADYTLS
                     VVPYYNKPSQEGMYRHFKAVAEAAAIPMILYNVPGRTVVSMNNETILRLAEIPNIVGV
                     KEASGNVGSNIELINRAPEGFVVLSGDDHTALPFMLCGGHGVITVAANAAPKLFADMC
                     RAALQGDIALARELNDRLIPIYDTMFCEPSPAAPKWAVSALGRCGPHVRLPLVPLTEG
                     GQAKVRAALKASGQL"
     gene            16372..17568
                     /gene="bamC"
                     /locus_tag="ACFJAG_001085"
     CDS             16372..17568
                     /gene="bamC"
                     /locus_tag="ACFJAG_001085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamC"
                     /protein_id="HFC3980384.1"
                     /translation="MPSEPFGRHNMTNTLISITQDDTMTHIKPVIAALALIGLAACSG
                     SKTEQPKLDYQSRSHRLIKLEVPPDLNNPDQGNLYRLPAGSGAVRASDLEKRRTPAVQ
                     QPADAEVLKSVKGVRLERDGSQRWLVVDGKSPAEIWPLLKAFWQENGFDIESEEPAIG
                     QMETEWAENRAKIPQDSLRRLFDTVGLGGIYSTGERDKFIVRIEQGKNGVSDIFFAHK
                     AMKEVYGDKNKDTTMWQPSASDPNLEAAFLTRFMQYLGVDGRQAENALAKKPTLPAAN
                     EMARIEGKSLIVFGDYGRNWRRTGLALDRIGLTVVGQNTERHAFLVQKAPNESNAVTE
                     QKPGLFKRLLGKGKAEKPAEQPELIVYAEPVADGSRIVLLNKDGSAYAGKDASALLGK
                     LHSELR"
     gene            complement(17625..18557)
                     /gene="pip"
                     /locus_tag="ACFJAG_001086"
     CDS             complement(17625..18557)
                     /gene="pip"
                     /locus_tag="ACFJAG_001086"
                     /EC_number="3.4.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0030163 - protein catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl aminopeptidase"
                     /protein_id="HFC3980385.1"
                     /translation="MYEIKQPFHSGYLQVSEIHQIYWEESGNPDGVPVIFLHGGPGAG
                     ASPECRGFFHPDVFRIVIIDQRGCGRSHPYACAEDNTTWDLVADIEKVREMLGIGKWL
                     VFGGSWGSTLSLAYAQTHPERVKGLVLRGIFLCRPSETAWLNEAGGVSRIYPEQWQKF
                     VAPIAENRRNRLIEAYHGLLFHQDEEVCLSAAKAWADWESYLIRFEPEGVDEDAYASL
                     AIARLENHYFVNGGWLQGDKAILNNIGKIRHIPTVIVQGRYDLCTPMQSAWELSKAFP
                     EAELRVVQAGHCAFDPPLADALVQAVEDILPRLL"
BASE COUNT         4809 a         5365 c         4724 g         4167 t
ORIGIN      
        1 tttcgattga gtgcgacaat atccaaatct tcttgtaaat atagagttat tcggagcggc
       61 agtatagaac cgcccgaata actctatccg gtatatcaga cagtttaatc aaactgcctt
      121 aagcaaacag ctatcagttt ttagccaagt aagcttccaa atcttcgctg ccgccgatgt
      181 atttgccgcc gatgaagact tgaggggcag tcatcttgcc ggtaatagcg cgaacggaag
      241 taacggttgc atctttgccc aatacgattt cttcgtaaga caaacctttg tcttgcaaag
      301 cttgtttgac tttggcacag aattggcaac ctggtttagt gaaaattgcc acagactctt
      361 gagccttcca atcgggagca acgaatttca gcatagtatc tgcatcggat actttgaaag
      421 gatcgcccgg ttcttcaggt tcgatgaaca ttttttcaac cacgccgtcg ttaaccagca
      481 tggagtaacg ccaagagcgt ttgccgaagc ccaagtcttc tttaccgacc agcataccca
      541 taccttcggt aaattcgccg ttgccgtcag gaatcatgta gatgttgtct gattcttctt
      601 cggcagccca agcgttcatt acgaaagtat cgtttacaga tacgcagcag attgcgtcaa
      661 cgccgttttc tttgaacgcg ccgaataatt cgttgtaacg cggcaggtgt gaagaagaac
      721 aagtcggggt aaatgcaccg ggcagggaga atacgactac ttttttgcct ttgaacaaat
      781 catcggtaga cacatctttc caagtgtcgc cgacgcgggt gcggaatact acggaaggta
      841 ctttttgacc ggtacgatct tgcaaagcca ttttgagctc cttaatagat tggtttgaga
      901 aataattgtg aatcgccgcg cattctaccc catgcaaaat gatttgtata atttatagtt
      961 taaataatat aaattattta aaactatcaa atacaactcc gatttgcctg ttccccacat
     1021 ataaagccga attagagaaa aacaagctgc aatgaaaaga ttttccggca actgctcccc
     1081 tgcgccgcaa ctcaggacaa aatgccgtct gaaaggcttt cagacggcat ttgttcatac
     1141 ggtctcggct tatttcgcca attcggcacg cagtttgcgg gttacgttca tcattacttg
     1201 aagctgttcc agagtttctt tccagccgcg tgttttcagg ccgcagtccg ggttaaccca
     1261 cagacgctca accggaacaa cctcaatggc tttgcgcaac aggtgttcca cttcggcttc
     1321 tgtcggtacg cgcgggctgt ggatgtcgta aacgcccggg ccgatgtcgt tcgggtattt
     1381 gaattcgccg aacgcagcca agagttccat gtcggaacgt gaagtctcaa tggtgatcac
     1441 gtccgcatcc attgcagcaa tcgcaggcag gatgtcgttg aactcagagt agcacatatg
     1501 agtgtggatt tgagtgctgt cttcgcaacc tgcagaggat agacggaagg attcgcccgc
     1561 ccagttcagg taggcatccc aatcggcacg tttcaaagga agaccttcgc ggatggcagg
     1621 ttcgtcaatt tggatgactt taatgccggc tttttccaga tccaatactt cgtcgttcag
     1681 agccagtgcg atttgtttgc acacggtagc gcgcggaata tcgttgcgga cgaaagacca
     1741 ttgcagaatg gttacaggac cggtcaacat acctttcatc gggcgtttgg tcaggttttg
     1801 tgcgtaagta gaccaagcga cagtcatagc ttcaggacgg cttacgtcac cgaagatgat
     1861 aggtggttta acgcagcgtg agccgtagct ttgcacccag ccgtattggg tgaatgcaaa
     1921 accgctcaac agttcgccga agtattcgac catgtcgtta cgctcggctt cgccgtgcac
     1981 cagtacgtcc aagtccagtt tttcttgctc ttcaaccacc aaggcgattt cttttttcat
     2041 tgcggcttcg taatcggagg cagacagttc gccttttttg aaggctgcgc gtgcttggcg
     2101 gatttcggta gtttgcggga aagaaccaat gttggtcgtc ggcagcagag gcaggttcaa
     2161 ccatgcttgt tgcgctttga tacggtcggc aaacggtgat ttgcgttggc ctgcgttgac
     2221 aggcaggtcg gccaagcgtt tggcaacgtc tgcacggtgg atttcactgc tgttggcacg
     2281 ggagtcggca gcagcttggc tggcggccag ttcttcggca acagaatcac ggccttcatt
     2341 caatgcggct ttcagaacac gcaattcttg ggttttttgc agagtgaatg ccaaccaaga
     2401 gtacaggtcg ggtttgttgg ctttcagttt ttcttcgact gacaagtcaa acggagtgtg
     2461 cagcagcgag caagagctgg aaatccacaa acgctcgccc agtttggctt gcagaggccc
     2521 gacggtttcc aaaactttgt tcaggttggc gcgccaaatg ttgcggccgt caatcacgcc
     2581 ggcagacagg actttgtcgt agccggcgaa cgcgtccagt tgctcgggtg cgcgtaccaa
     2641 gtcgatgtgc aggccgtcaa caggcaggga tttcaacaat gcggcgtgtt cggcaacaga
     2701 accgaagtaa gtgcccaaca ggattttggc gcttactttg ttcaaagtag cgtaaacgtc
     2761 tttgtatgct tctacccatt ctttaggcag atcgacagcc aaagcaggct cgtcgatttg
     2821 aatccactcg gcaccggctt caaccaaagc agtcaggatt tcaacgtaaa caggcaacag
     2881 tttaggcaac aggctcagac ggtcgaattc aacggagcct ttttctttac ccacccacag
     2941 gaaagtcaaa ggaccgacaa cggtcggttt ggctttcaag cccaaagttt gggcttcttg
     3001 cagttgttga acgtagtgtt tggcgttggc tttgaattcg gtatcggcat ggaattcagg
     3061 caccaggtag tggtagttgg tgtcgaacca tttggtcatt tcgatggcga attggtcttt
     3121 gttgccgcgc gccagttgga agaattgttc caaaggcagg ttttggctat cgaagccgaa
     3181 acgggcggga atcgcgccgg tggcaacttg caggtcgagg atgtgatcgt agaaagtgaa
     3241 atcacctaca gcaacgtaat cagcgttggc agcagcttgg tgtttccagt ttttctcgcg
     3301 caggtctttg gcaacgtcga gcagctcttg ttcactgatc tctttgcgcc agtatttttc
     3361 ttgggcgaat ttcaattcac ggaaggcgcc gacacgcggg aagcctgaga aatgtaatgt
     3421 tgtcatgttg aactctccag ttggattttg taaggaccgg ttcaatccga atcggccggt
     3481 attgtaaatc agaatggctc ggatagggcg gcgttttgct tttcagacgg cctcggatgc
     3541 tgtctgaagc cgttttcggc tttaagggcg cgcgcctaaa atatggcaga tggcgtaagt
     3601 cagctcgctg cggttgagcg tgtagaagtg gaaatctttc acgccttcgc gggacaggac
     3661 tttaaccata tcgatggcga tactggcggc gacgaggttg cgcgtgcctt ggtcgtcgtc
     3721 caagccttca tacatttgcg acagccattt cgggattttg acgttggtta cttgtgccat
     3781 tttgccgagt tgcttgaagt tggtaacagg caggatgccg ggaacgattt cgacgtcgat
     3841 gcccaacatc acgcagcggt cgcggaagcg caggtagcgt tccacatcga agaagaattg
     3901 ggtgatgacg tggttcgcgc ccgcatcgat tttgcgcttc agattaatca ggtcggcttg
     3961 tgcggatttc gcttcgggat gtacttcggg gtatgctgct acagagatgt cgaagtcggc
     4021 gacggagcgt aatagcttaa ccaagtcttc ggcgtaaaac ggttttttct cataaccggc
     4081 cggctcgtcg ccacgcaggg caacgatgcg gcggataccg ctgtcccaat agtctttggc
     4141 gatttggcgc aattcgtcgt gggatgcatc gatgccggtc aggtgcggag ctgcttccaa
     4201 accggtttcc tgtttgatgc gtttgacgat gccgtgcgtg cggtcgcgtt cgccggagtt
     4261 tgcgccgtaa gttacggata cgaacttggg atgcagggtt tgcagacggt ggatggaatc
     4321 ccacagcatc gtttccattt gttcgttttt cggcgggaaa aattcaaacg aaacgttgat
     4381 gttgcctttc aaatcggaaa ggctgttgtt taacgcattg atttcttttg cataattcat
     4441 atctgcatat tcgttatctt ttacatgatg tttcaggcgg tatgataagg ttgcaccgaa
     4501 tatgagtcaa tttcaaaatt ttcaggttta tgatgaaaat ttttaatatt tagcaaaaac
     4561 tatacgcttt tcttgtacaa tccttctaaa ttatgataaa gtttgttatg ttataacact
     4621 tcaatcaagg caatatatga aaccgaatat tcatcctgac aattatcgaa ccgtcctttt
     4681 tttcgacagc agtgccaatg aaggctggct gattcgttct tgcgccggaa cgcacggaaa
     4741 aacaatggtt tggacagacg gcaaagaata tccgctcttt tccttagata cttcctcttc
     4801 ctcacatccc gtctataccg gcaaacagcg taacgtcaat accgaaggcc gtgccagcaa
     4861 gttcaaccaa cgtttccaat ccgtcatgtc atcgtttaga aaggacaaat aatgcaggtt
     4921 ctgtcttcgc tcaaaaccgc caaacaacgc caccgcgact gccaaatcgt cagacgcagg
     4981 ggcaaagtgt acgtcatctg caaaagcaat ccgcgtttta aatcgcgcca acgctgaccc
     5041 cctgcccttc ctgcttcggt tgtaaagccc ctcctaccgc aagccctttt caaatatgcc
     5101 gtctgaaaca gaaaaatgcg tttcagacgg catttttccg tcgatacgaa tccggaatgt
     5161 gtttgaaata cagcataaac agataccaaa acagcgtcgc ggcggctgca ccgagcagta
     5221 cccatgcgct gatttcggcg acttcgcgca ggacacgttt ctgcctgcgg ctaaagaggc
     5281 ggttgataat cagcgcggca agtgcgaaaa agaaaaaaat acggaaaagt ctgcctatca
     5341 tgtcgggaag cgaaaagtat ggttcgggcg cggcggcatg ggaaaggatg tttcagcgcg
     5401 tcaggctgct tgtccgaccg tgtcaaaaag tcatgccgtt tgcgatataa taacgctttt
     5461 cgccgcattt gttggaacag gatatgagtc aaaatacctc ggtgggcatt gtaacgcccc
     5521 aaaaaattcc gtttgaaatg ccgctggttt tggaaaacgg taaaactttg ccgcgtttcg
     5581 atctgatgat tgaaacctac ggcgagctga atgctgaaaa aaacaatgcg gttttaatct
     5641 gccacgcgct gtcgggcaac catcacgttg cgggcaggca ttcggcggag gataaatata
     5701 cgggctggtg ggacaatatg gtcggtcccg gaaaaccgat tgatacggaa cgttttttcg
     5761 tggtcgggtt gaacaatctg ggcggctgcg acggcagcag cgggcctttg tcgatcaatc
     5821 ctgaaacggg cagggaatac ggcgcggatt ttccgatggt tacggtgaag gactgggtaa
     5881 aatcacaagc cgcgcttgcc gattatctcg gcatcgaaca atgggcggcg gttgtcggcg
     5941 gcagcttggg cggcatgcag gctttgcagt gggcgatttc ctatcccgaa cgtgtgcgcc
     6001 acgccttggt gattgcgtct gcgccgaaac tgtccacgca aaatatcgcg tttaatgatg
     6061 tagcacgtca ggcgattttg accgaccccg atttcaatga aggacattac cgcagccaca
     6121 acaccgttcc cgcgcgcggt ttgcggattg cccgtatgat gggacacatt acgtatcttg
     6181 ccgaagacgg tttgggcaaa aaattcggac gcgatttgcg ttccaacggc tatcaatacg
     6241 gctatagcgt tgaatttgaa gtagaatcct atctccgcta tcaaggcgac aaattcgtcg
     6301 ggcggtttga tgctaataca tatttgctga tgaccaaagc tttggactat ttcgatccgg
     6361 cggcggattt cggcaacagc ctgactcgcg ccgtgcagga tgtgcaggca aaattctttg
     6421 tcgccagctt cagcaccgac tggcgtttcg cgcccgaacg ttcgcacgaa ctggtcaagg
     6481 cactgattgc cgcccaaaaa tccgtgcagt atatcgaagt caagtccgca cacgggcacg
     6541 atgccttttt aatggaagac gaagcctata tgcgcgccgt aacggcttat atgaacaatg
     6601 ttgacaagga ttgccgatta tgaacctgcg cgatgatttg caactgattt acgaccggat
     6661 acccgaaggc agccgcgtct tagacttggg ctgcggcgac ggcgaattgc tggcggcttt
     6721 ggcggaacac aaaaaatgca gcggctacgg catcgaaatc gacaccgaca acgtgattgc
     6781 tgcgatgtcg cgcggcgtaa atgttatcca agccgatttg gaagaagggt tgaccgcatt
     6841 caacgatcaa agttttgatg tgattgtttt gagccaaacc atccaagcga tgcagaatac
     6901 cgaaaaaatc ctgcgctgcc tgatgcgcct cgccaaacag gcaatcgtca gtttcccgaa
     6961 tttcggctac tggcgcaacc gcgtccaaat cgcactcggc ggacatatgc cggtttccga
     7021 acgtatgccc taccattggt acgacacgcc caatatccat tggtgcacgc tcaaagactt
     7081 tgatttgttg tgcgccaaaa acaatatccg cgtcctcgaa cgcgccgtga tgacgggcaa
     7141 cagacaggtc aaacatttcc ccaacctttt gggcagcctt gcgttttacc gcgtcgggta
     7201 agacaggttg aaaaccttgt cggcaataac gggtttctcg gttctattaa caacagtccg
     7261 tctgaaaaat gaaacggcag gttttcagac ggccttttca atattggaaa caatagaatg
     7321 aaaaacaaaa cgtcatcact tcccttatgg cttgccgcaa tcatgctggc cgcgcgttcc
     7381 ccgagcaaag aagataaaac gaaagaaaac ggcgcatccg ccgcttcgtc ttccgcgtcc
     7441 caatccgatt tgcaaccggc cgcatccgcc cctgataacg tcaagcaggc agaaagcgcg
     7501 ccactgtgaa attgcaccgg cctgcacccc gccgccggca ttggcgatct catacagcaa
     7561 atcgccgaac acatcgactc ggactgtctg tttgcccttt cccataacga actggaaacc
     7621 cgtttcggct tacccggcgg cggctatgac aacatacagc ggctgctgtt tcccgacatc
     7681 cgccctgaag atcccgacta ccatcagaaa atcatgctgg caatcgaaga cttgcgttac
     7741 ggaacgcgca ctatcagccg gcaggcacaa gatgccataa tggaacagga acgccgcctc
     7801 cgagaagcga cgctgatgct gacacagggc agtcaagaaa gccgagaaca aggcgaggaa
     7861 ccgaaacgcg cacgttattt tgaagtttcg gcaacatctg cctatttgaa ccggcacaac
     7921 aacggactcg gcggcaattt ccaatacatc ggccaattgc ccggctatct gaaaatacac
     7981 ggagaaatgc ttgaaaacca atcactcttc cggctgtcca accgtgaacg caatcccgac
     8041 aaaccgtttt tagacatcca ttttgacgaa aatggcaaaa tcacgcgtat tgtcgtttac
     8101 gaaaaaaata tctatagtgg attaacaaaa atcaggacaa ggcgacgaag ccgaagacag
     8161 tacagatagt acggcaaggc gaggcaacgc tgtactggtt taaatttaat ccactatact
     8221 tcaatccaaa cacggggcga atataaaaaa atgccgtctg aaacgttttc agacggcatt
     8281 tttcaagtag gatatcaggc gcgtttgcgg aattcgccgg tacgggtatc gatttcgact
     8341 ttgtcgccgt tttcgatgta agacatcact tggatttcgg tgccgccgac cagacgcgcg
     8401 gttttcatca ctttgccgga agtatcgcct ttgacggcag gctcggtgta ctcgacttcg
     8461 cgcacgatga tggtgggcag ttcgacagaa atgggattgc cttcatagaa ggtaacttcg
     8521 cattggtctt ccataccgtc aacgatgaat ttcaacgcgt cgccgatgtt gtcggcttcg
     8581 atttcgtatt ggttgaattc ttcgtccata aagacgtaca tcgggtcggc aaaatagctg
     8641 tacgtacagt ttttgcggga caggatgacc acgtcgaatt tgtcgtcggc tttgtaaatg
     8701 gtttcggaag cagcgccggt cagcaggttt ttcagtttca tgctgacttt ggcggaagag
     8761 cggccgcctt tgatgtattc ggttttttga acgaccatag gatcgttgcc gaccataaat
     8821 acattgccgg cgcgcagttc ttgtgctgtt ttcattgtga ttttccaatc aaatcggttg
     8881 tcgtaaaacg cgctattcta gcgtattttt tgatgctttg aaacaaaggc ggcgagtttt
     8941 tcggatgcgg aaggctgccc gaaaagataa cggctccaat cctccgcgcc ttgccgccag
     9001 ccgttttgat gttgttgcag ggtttgccaa cattcgaggc gttgtgttgc ggataaagcc
     9061 tctccgccgt tgaggtcgtc cgaaaggagg cggtgcaccg atgcggtttc gggcgtgtag
     9121 aagccgtatg ccttatccca aaaggcgtgg agtttgtcga gatggacatt ctcgtcttgc
     9181 gggtagatgt gccaaaaaaa gggttttccg gcaagctggg tacgcacgaa actgtcttcg
     9241 ccgcgtatca cggcgcagtc ggcgaggtgc agcaatttgt cgaagtcctg ttgcggcacg
     9301 aacgggattt tgacaaggcg gacggatgcc gtctgaaaga caccgccgtc attttgcagg
     9361 gcgttttgcg gaataacgcc gctttgtttg aggctgtcga taatttgcgc ccccgccagc
     9421 agtagggtca tcaggctgcc tgcctgttgc cacatgtcca gccactttgc ccaaacatcg
     9481 ccccgatagc cgaaaagcag ccattcgggg gcgttttttt cgggcagcac cagccgccgg
     9541 cgcagggctt cggtatcgaa acggacggct tcgcggtaat cgcgttcgcg tatcaacccg
     9601 ccgctttttt cgctgaaacc cataaaccaa aaatattttt gaacgccctc ctgcggcgaa
     9661 ggcatcaggt gcagcctttc attgctttcc tccgcgctca aatattccca attcagccaa
     9721 agcggtttgt gtcggcggat gatgttcagc acattttcgg gcaggtcgca ggcaaaagtt
     9781 tcgataacgg catcgggaac gggcgcggta tcaatgtctg ccgcatcgga atgccaagtg
     9841 cggacatgaa tatcctgatg aacgaaggga acatcgggca aatcgggaca aagcgcgcgc
     9901 aaggcggaca cgtcgtccgt ccacaaatgc acctgccaac cgagttcgcg gtgcaaaaca
     9961 cgggcgagcc gccacgaaac gccgatgtcg ccgaaattgt cgatgacctt gcaaaaaatc
    10021 caacaggcag gaaaagcgta tgtattcata accatcggga aaacaagcta aaacgcgccg
    10081 aaatagtgga acaaatacac aaccagcaaa acaatcggaa taaacagaaa catggtttga
    10141 cgtttcaaat caaacccttg tttaagatga tgcttgatgg tttcaaagag gacgaattta
    10201 aacaaaaacg tcgcttcgca ggcaaggatg atgccgttga tcagatgctg gggtttgtct
    10261 tcgggcggat tggcggcgaa aacggcaagc gtcgccaagg ggatgaggca gacggcgagc
    10321 cagcggacaa gcaggtttcg ggacattgca aggctttcaa aaaagcaaaa cgccattatc
    10381 gcctcaagaa cgcaccttgt ctaacggacg cgccggagat gccgtctgaa gccttgccgc
    10441 cggaaaacgc cgcaccgccg aacctttaaa tatacccggg acgggcgttc cccgagaaat
    10501 cggacgctgc cgccgatgcc tgcggacaag gcggcatcgg gcgcgggcat attgaaagcc
    10561 cgacgcatcg gtttgaacgc attttataaa ggcgtacggc aaacccgccc cttgccgtcg
    10621 gcgtgcttcc gcaaagcaaa atataagggc ggcgcgcttt ccgctataat ccgcattttt
    10681 ccaaacctga aacattatgc cgaccccgaa agcctttacc ctgctcgggc cgaccgcctg
    10741 cggcaaaacc gcgctcgccc tcaaaattgc cgaaaccctt ccggtcgaaa tcatcagcct
    10801 cgattctgca ctgctctata ccggtatgga catcggcacg gcgaaaccgt ccgcctccga
    10861 acgcgccttt gtcccgcacc accttatcga catcattacg cccgttcaga catacagtgc
    10921 cgcccgtttt gtcgaagact gcacgcgtct gaccggcgaa atcacggcgc gtgggaaatg
    10981 tccgctgatt gtcggcggca caatgatgta tttccgcgcc ctgacccaag gtttgaacga
    11041 tttgcccgaa gccgatgcct gcctgcgtgc cgacttggac gaacaaaaac agatgtacgg
    11101 tttggatttc ctctaccgca ccctgcaaaa agtcgaccct gaaacagcat gccgtctgaa
    11161 accgaacgac agccagcgca tcggacgcgc ccttgaaatc tattacctga ccggcaggcc
    11221 gatgagcgcg cacctgaacg gacagcccga acacaccctg cccttcgaac tctacaccgc
    11281 cgccctgatt cccgaagacc gcgcccgact gcacgaaaac atcgccctgc gtttccacct
    11341 gatgcttgaa cagggcttta tcggcgaagt agaaaacctg cgccgccgct atcccggcct
    11401 gaccgccgac tcccccgcca tccgctgcgt cggctaccgt caggcgtggg aacacctcga
    11461 cggtgcaacc gacagacaaa ccttcatcga aaaaggcatt gccgccacgc gccaacttgc
    11521 caaacgccaa ctaacttggt tacgcaaaac acctttagac tgcgttgccg acccgttttc
    11581 agacggcact tcaggcacgc gcctgattga ggcggcaaaa cggtttttcg gcgaataaac
    11641 catgctggcc acgccgccgc tcgcccccaa aaccgtcgcc gccctgcaca ggctcggtat
    11701 ccgtacgctc gaagaactgc ggcaaaacgg ttcggtcaaa gcctttctgc tgctcaaagc
    11761 atcgggtttg accctcacga aaagcacgct gtggcaactc gagtcgctgc tgaacggcac
    11821 gccgccgcaa gaaatgcccc aagcgcataa agactgcctg cttgccgagt tgaaaaacca
    11881 tccgcccgtc gccgcctttc cgccgcagga agaaatggga tacttcatgc gcgaagcact
    11941 gcgccaagca gaacaatccg ccgccgacgg cgaaataccc gtcggggcag tcatcgtttc
    12001 agacggcaaa atcatcgcat cggcacacaa cacctgcatt gccgactgca atgtcagccg
    12061 acacgccgaa atcaacgcct tggcacaggc aggcagcgaa atgcaaaact accgccttga
    12121 cggatgcgac atctacatca ccctcgaacc ctgcgccatg tgcgcgtccg cactgataca
    12181 ggcacgaatc aggcgcgtga tctacggtgc ggcagaaccc aaaaccggcg cggcaggcag
    12241 catcgtcaac ctgtttgccg acaaacgcct caatacgcac accgccatac ggggcggaat
    12301 cctgcaagaa gaatgccgcg ccgtattaag ccgttttttc caaaacaaaa gaaaaggttg
    12361 aacccatgac cgccctactc gtcatcctcg ccctcgccct gatagccgtc ggcacggcag
    12421 gcatcgtcta tcccgccctg cccggcttgg cattgatgtt tgccggaaca tggctgcttg
    12481 cctatgccgg cggctatcaa atctacggcg caggcatctt gtggacggtc ggactcatca
    12541 gccttggcgg catactggcg gactatatgg caggcatgtt gggggtaaaa tacactgggg
    12601 caggcaaact cgccgtccga ggtgcattgg ccggcagcat catcggcata tttttctccc
    12661 tgcccgggct gatactcggc ccctttatcg gcgcggcggc aggcgaactg atcgatcggc
    12721 gcaatatgct tcaggcaggt aaagcgggct tgggtacgct gttggggctt gtcgtcggca
    12781 cggcgttcaa aatcggctgc gccgtatcca tcttgtttat cctgttggtg aaatacatcg
    12841 cctacctgtt ttaacccctt cagacggcat accggcaaat tgctataatg ccgtctgaaa
    12901 tttccgacaa agcaccatta tggcaaacca aagacccatc tacggcttcc acgccgtcaa
    12961 cgcccgattg tggcaaaacc ccaaatcgat taccgaactc tatatccaag aaggcaaatc
    13021 cgacgcacgc acgcgcgaag tgctggaaaa ggcggcaaac gaaaacatcc gcgtatattt
    13081 tgccgatgcc gaccgcctca acgccatcag caaaggcgcg cgccatcagg gcgtggtcgg
    13141 atttatcgat gcctccaaaa accacgtcca cctcgaagac gtattggaaa acttgagcga
    13201 accgccgctg ctgctgatac tcgacggcat caccgatccg cacaacctcg gcgcgtgcct
    13261 gcgtaccgcc gacgcaatgg gcgtacacgc cgtcatcgcg ccgaaagaca aaagcgcggg
    13321 actgaacgcc accgtcagca aagtcgcctg cggcgcggcg gaaaccgtcc cctacatcac
    13381 cgtaaccaac ctcgcccgca ccctgcgcga attgaaagaa tacggcatct ggattatcgg
    13441 caccgacata ggcggcaacg ccgaccttta ccattgcaat ctgcccgaca gcgcggcatg
    13501 ggtgatgggc aacgaaggcg acggtatgcg ccgcctcacg cgcgaacatt gcgacatgct
    13561 ggtgtccata cccatgttcg gcacggtcga aagcatgaac gtctccgtgt ccgcaggaat
    13621 ggtattaagc gaaacccgcc ggcaacgcgt attgaaaaac aaaaaagcgt aagcctcaaa
    13681 aacaatgccg tctgaaacag ggattccgtt tcagacggca ttcattttca aaatcagtgt
    13741 tccaaatggt cggtatcaaa cttgaccgcc gcctcggttt tatcttccgg caagaccaaa
    13801 ttcagcaaga ctgccgtaat gccgccgccg gaaatagagt tttggaacaa gacgggcagg
    13861 tttttaaaca cttccggctc aaaccccacg cccaagccca aaccgaccga cgttgccgca
    13921 atcaccgcct cgcgcctgcg gatgccgtgg ccgaccaaaa tccgcacgcc cgcaatcgca
    13981 atcaggccga acatcaaaac catcgcgccg cccaacaccg gactcggaat cgtcgtaaac
    14041 gcgcgtccga caacggggaa cagacccaac agcaccaaaa tcacggcaat atatttgccc
    14101 acgtggcgcg aagccactcc ggtcatctga atcacgccgt tgttttgcgc aaacgtcgtc
    14161 agcggcagcg aacccaaagc cgtcacaatc accgatacca agccgtcagc caacacgccg
    14221 ccgcgcaagc gtttggtgta ttcttcgcct tcaatcggct ggtcggacac cattgccgtt
    14281 gccgtcaaat cgccgaccgc ctcaaacacg cccaacaaga aaatcgcacc cgccgcaata
    14341 aatgcgtgcc agtcaaaagc aaaaccatat ttaaacggta cgggcagcgt aaccggcggc
    14401 aggttttgca gtgcggaaaa atccaccttg cccaaaaaca gcgcgacaat gtagccggca
    14461 atcagaccga ccgcaatgcc gctcatccgc agcagcggat ttttcatgca gttgaacacc
    14521 agcacaatca gcagcaccag cgaagccagc cccaagtttt ccatcgagcc gaacgtgccg
    14581 tccgccttcg cgccgaagcc gccgccgaaa tcggcaatac cgacgtgtac caaactcaga
    14641 ccaatcagca tcacaaccac accgctgacc gtcggcgtaa tcactttttt caaatacggc
    14701 agcagccacg ccgagaaaca caccaaaaac gcaccggcaa acgatacgcc caagagcgtc
    14761 gaaaccatcg ccccctcact caaaccgccc tctttcatcc ccgcgccgag cgcaatcatg
    14821 acggtaacgc tggatggaca gcatccccga accgaccggc ccgaagcggt tgacctgcaa
    14881 ataagtgccg acacccgacg caaccatcgc catcgacacg agatacgccg tcatttccac
    14941 cggtagttcc agcgcgccgc ccacaatcag cgcgggcgta atcatcggca cgaaaatcgc
    15001 caaaagatgg gtaaccgcgc tcaagagcgc attaccgaac ggcggcctgt cttccaaacc
    15061 gtacaccaaa tcaggcgaat ccgcctgttt tttcattgtt tcagccattg gagtctttct
    15121 atccgttgcc aaacgttaaa aaattttaag aacgaaattg taacgaatca aagattcctt
    15181 atcaattcaa atcctcatgt gcaaaaacac caccggttgt ccgaattcaa atttctttga
    15241 atttccgcac cggacagtcc ttcatttcca gagagccttc atgcgcttaa cacattttaa
    15301 tcctcaacgg cgcatccact gcttaaaccc aataatttca tgattataaa aaaaatatta
    15361 tttattaaga tatgatggga cttaagcctt ggaaccaacc gtgcggccga tatgtttcac
    15421 acaaacaaca aagtaagcta caatccgaag cataatcgac ctcactcaat gaataaaagg
    15481 tttccgtatg ttacaaggta gcttggttgc cctgattacc ccgatgaatc aagacggcag
    15541 catccattac gaccaactcc gccaattaat cgactggcac atcgaaaacg gcacggacgg
    15601 catcgtcgct gccggcacga caggcgaatc cgccaccctc tccgtcgaag aacatttaag
    15661 cgtaatcgaa gaaacggtca aacacgttgc caaacgcgtc cccgtcatcg ccggcacagg
    15721 ggcgaacaac accctcgaag ccatcgccct ttcccaagcc gccgaaaaag ccggcgcgga
    15781 ctacaccctc tccgtcgtcc cctattacaa caaaccttcg caagaaggca tgtaccgcca
    15841 tttcaaagcc gttgccgaag ccgccgcgat tccgatgata ctctacaacg tgcccggcag
    15901 aaccgtcgtc agcatgaaca acgaaaccat cctgcgcctt gccgaaatcc ccaacatcgt
    15961 cggcgttaaa gaagcaagcg gcaacgtcgg cagcaacatc gaactcatca accgcgcgcc
    16021 cgaaggcttc gtcgtccttt ccggcgacga ccacaccgcc ctgccgttca tgctctgcgg
    16081 cggacacggc gttattaccg tagccgccaa cgccgccccg aaactctttg ccgatatgtg
    16141 ccgtgccgcg ctgcaaggcg acattgccct tgcacgcgaa ctcaacgacc ggctgattcc
    16201 gatttacgac accatgttct gcgaacccag tcccgccgcg ccgaaatggg cggtatccgc
    16261 cctgggcaga tgcggaccgc acgtccgcct gccgctcgtt ccgctgacgg aaggcggaca
    16321 ggcaaaagtc cgcgccgccc tgaaagcctc aggacaactt taaatatagc catgccgtcc
    16381 gaaccgttcg gacggcataa catgacaaac actttaatat ccatcacaca ggatgacacg
    16441 atgacccata tcaaacccgt cattgccgcg ctcgcactca tcgggcttgc cgcctgctcc
    16501 ggcagcaaaa ccgaacagcc caagctcgac taccaaagcc ggtcgcaccg cctgatcaaa
    16561 ctcgaagtcc cgcctgattt gaacaacccc gaccaaggca acctctaccg cctgcctgcc
    16621 ggttcgggag ccgtccgcgc cagcgatttg gaaaaacgcc gcacacccgc cgtccaacag
    16681 ccagccgatg ccgaagtatt gaaaagcgtc aaaggcgtcc gcctcgagcg cgacggcagc
    16741 caacgctggc ttgtcgttga cggcaaatcc cccgccgaaa tctggccgct tctgaaagcc
    16801 ttttggcagg aaaacggctt cgacatcgaa tccgaagaac ccgccatcgg acaaatggaa
    16861 accgagtggg cggaaaaccg tgccaaaatc ccccaagaca gcttgcgccg cctattcgac
    16921 acagtcggtt tgggcggcat ctactccacc ggcgagcgcg acaaattcat cgtccgtatc
    16981 gaacagggca aaaacggcgt ttccgacatc ttcttcgccc acaaagcgat gaaagaagtg
    17041 tatggcgaca aaaacaaaga cacgaccatg tggcagcctt ccgcttccga ccccaacctt
    17101 gaggccgctt tcctgacgcg ctttatgcaa tatttgggcg ttgacggacg gcaggcggaa
    17161 aacgcattgg caaaaaaacc gacccttccc gccgccaacg aaatggcgcg tatcgaaggc
    17221 aaaagcctga ttgtctttgg cgactacggc agaaactggc ggcgcaccgg ccttgccctc
    17281 gaccgcatcg gactgaccgt cgtcggtcaa aacaccgaac gccacgcctt cctggttcaa
    17341 aaagccccga acgaaagcaa tgcagttacc gaacaaaaac cggggctgtt caaacgccta
    17401 ctgggcaaag gcaaagcgga gaaacctgcc gaacagccgg aactgattgt ctatgccgag
    17461 cctgtcgccg acggttcgcg catcgtcctg ctcaacaaag acggcagcgc atatgccggc
    17521 aaagacgcat ccgcactgtt aggcaaactc cattccgaac tgcgttaaac cgttcaaaac
    17581 aaaagcagct tccaaacaga agctgctttt ttgtgcggaa ctttttacaa caaacggggc
    17641 aaaatatcct caaccgcctg aaccaacgca tccgccaaag gcggatcgaa cgcacaatgc
    17701 cccgcctgga ccaccctcaa ttccgcttca ggaaaggctt tcgacagctc ccacgcactc
    17761 tgcataggcg tacacaaatc ataccgcccc tgcacgataa cggtcgggat atgccgtatt
    17821 ttgccgatat tgttcaaaat cgccttatca ccctgcaacc aaccgccgtt gacaaaataa
    17881 tggttttcca aacgcgcgat tgccagtgag gcataagcat cttcatccac tccctccggc
    17941 tcgaaacgaa tcagatagct ttcccaatcc gcccaagcct tcgcggcaga caggcacact
    18001 tcttcatctt gatgaaacag caacccgtga tacgcctcaa tcagccggtt ccgccgattt
    18061 tcagcaatcg gcgcgacaaa tttttgccat tgttccggat aaatccggct cacgccgccc
    18121 gcctcgttca gccacgccgt ttcagacggc ctgcacaaaa atatcccgcg caacaccaat
    18181 ccctttaccc gttcgggatg ggtttgggca taagccagcg acaaagtgct gccccacgaa
    18241 ccgccgaaca ccagccattt cccgataccc agcatttcac ggactttttc aatatccgcc
    18301 accaaatccc aagtcgtatt gtcttccgca caagcatacg ggtgcgaacg tccgcaaccg
    18361 cgctggtcga tgatgacgat gcggaacaca tcaggatgaa aaaaaccccg acattcaggc
    18421 gaagcccccg cgcccggccc gccgtgtaaa aaaatgaccg gcacaccgtc gggattgccc
    18481 gactcttccc aataaatttg atgaatttca gacacctgca agtatccgct atgaaaaggc
    18541 tgttttattt catacatcat cttctcccat attgcttctg acaatccgaa catcccgaca
    18601 cgcgacatcc cgcacgaaac acaagccgcc ccgaaaggca aatgccgaaa aatcgcgata
    18661 aaaaccatca atcggaaaat attgcataaa caggcgaaaa tatatcattg aaaagaaaac
    18721 ccatacaatg tctgacagaa acaagccgct ttgccattgt ttcctaacag ttaaaccccg
    18781 cccttcaagg cggcggggca gggcttgatt caaaatggcg caagcccctg ccctcaaatc
    18841 caacacgcag gattaaacca taatagcggc tttcttatta tttcttattg aaacaccgcc
    18901 cggaacccga tataatccgc ccttcaacat cagtgaaaat ctttttttaa ccggtcaaac
    18961 cgatataagg agccgaaaat gaatccagcc cgcaaaaaac cttctcttct cttctcttct
    19021 cttctcttct cttctcttct cttctcttcc gcagcgcagg cggcg
//
LOCUS       DAXFZM010000037        19061 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.037, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000037 DAXFZM010000000
VERSION     DAXFZM010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19061)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19061)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19061
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.037"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..354
                     /locus_tag="ACFJAG_001087"
     CDS             <1..354
                     /locus_tag="ACFJAG_001087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cadmium resistance transporter"
                     /protein_id="HFC3980386.1"
                     /translation="DDCEGEKRAKKELDEKGLSKLVGIVALVTVASCGADNIGLFVPY
                     FVTLDLVDLLVTLLVFLILIFVLVYTAQRLANISGVGEIVEKFSRWIMAVIYIGLGLF
                     IIIENNTIRTIISII"
     gene            662..1758
                     /locus_tag="ACFJAG_001088"
                     /pseudo
     CDS             662..1758
                     /locus_tag="ACFJAG_001088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675858.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NnrS family protein"
     gene            complement(1805..3994)
                     /locus_tag="ACFJAG_001089"
     CDS             complement(1805..3994)
                     /locus_tag="ACFJAG_001089"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0032508 - DNA duplex unwinding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HFC3980387.1"
                     /translation="MIYHRIAVNVPLSDGLLTYSHSEPLPPGTRVLVPFRNKTVVGMV
                     WETDIAPDMDAARILSVQTVFVEEKPLSQSWRDLLAFTSRYYHYPTGQAVFAALPQGL
                     KETRAVEMPQPPLFYALNEAGRAQTPPPARFNKKAALWDALLSGEMTMAALKQANAQA
                     AKLIEDWAEQGWIETTEAAKPVLRPYRGQASHSEFVLNTGQQKASDQIQTALGRFRSF
                     LLYGITGSGKTEVYFDAMAKVLAQGRQVLFLLPEINLTPQLLKRVENRFADVPTAVLH
                     SRMAAGRRTQDYLRAMLGQAKLVIGTRLAVFTPLPDVGLIVVDEEHDGSFKQDNELRY
                     HARDLAVWRAKQGGCPVVLGSATPSLESWHKAQSGAYRLLQLTERAHASAQLPQVDIL
                     NIGRLKLDNGFSPQALQLLKQNFEAGGMSLVYLNRRGFAPALFCGDCGHTFGCPNCSA
                     KMVLHQRARQLRCHHCDHREPIPFKCPDCGNQDLTAVGHGTQRVEETLRALLPKAAVV
                     RVDRDSTAHKNDWADLYRRIANDEIDILVGTQMLAKGHDFARLNLVIVLNADGSLYSA
                     DFRAPERLFAELMQVSGRAGRADKPGKVLIQTQLPEHPVFAAVKAQDYAVFAENELNE
                     RQMFAMPPFGFQTAVRADAPRVADAMEFLNAAKETLAPLLPESVSRFGAAPMLMVRLA
                     ERERAQVFLESTSRQDLHRAVSLWVQVLQQNRDGKIRWSVDVDPQEA"
     gene            4134..4919
                     /locus_tag="ACFJAG_001090"
     CDS             4134..4919
                     /locus_tag="ACFJAG_001090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbC family protein"
                     /protein_id="HFC3980388.1"
                     /translation="MKTKLIKILTPFTVLPLLACGQTPVSNANAESAVKAESAGKSVA
                     ASLKARLEKTYSAQDLKVLSVSETPVKGIYEVVVSGRQIIYTDAEGGYMFVGELINID
                     TRKNLTEERAADLNKIDFASLPLDKAIKEVRGNGKLKVAVFSDPDCPFCKRLEHEFEK
                     MTDVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFPVGGSICDNPVA
                     ETTSLGEQFGFNGTPTLVFPNGRTQSGYSPMPQLEEIIRKNQQ"
     gene            complement(5018..6952)
                     /locus_tag="ACFJAG_001091"
     CDS             complement(5018..6952)
                     /locus_tag="ACFJAG_001091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MacB family efflux pump subunit"
                     /protein_id="HFC3980389.1"
                     /translation="MSLIECKNINRCFGSGENRVHILKDISLSIEKGDFVAIIGQSGS
                     GKSTLMNILGCLDTAGSGSYRIDGIETAKMQPDELAALRRERFGFIFQRYNLLSSLTA
                     RDNVALPAVYMGMGGKERSARADKLLQDLGLASKEGNKPGELSGGQQQRVSIARALMN
                     GGEIIFADEPTGALDTASGKNVMEIIRRLHEAGHTVIMVTHDPGIAANANRVIEIRDG
                     EIISDTSKNPEIPASNVGRIQEKASWSFYYDQFVEAFRMSVQAVLAHKMRSLLTMLGI
                     IIGIASVVSVVALGNGSQKKILEDISSMGTNTISIFPGRGFGDRRSGKIKTLTIDDAK
                     IIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGRLFDENDV
                     KEDAQVVVIDQNVKDKLFADSDPLGKTILFRKRPLTVIGVMKKDENAFGNSDVLMLWS
                     PYTTVMHQITGESHTNSITVKIKDNANTRVAEKGLAELLKARHGTEDFFMNNSDSIRQ
                     MVESTTGTMKLLISSIALISLVVGGIGVMNIMLVSVTERTKEIGIRMAIGARRGNILQ
                     QFLIEAVLICIIGGLVGVGLSAAVSLVFNHFVTDFPMDISAASVIGAVACSTGIGIAF
                     GFMPANKAAKLNPIDALAQD"
     gene            complement(7018..8196)
                     /locus_tag="ACFJAG_001092"
     CDS             complement(7018..8196)
                     /locus_tag="ACFJAG_001092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MacA family efflux pump subunit"
                     /protein_id="HFC3980390.1"
                     /translation="MAKMMKWSAVAAVAAAAVWGGWSYLKPEPQAAYITETVRRGDIS
                     RTVSATGEISPSNLVSVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTTQTNTIDMEK
                     SKLETYQAKLVSAQIALGSAEKKYKRQAALWKDDATSKEDLESAQDALAAAKANVAEL
                     KALIRQSKISINTAESDLGYTRITATMDGTVVAIPVEEGQTVNAAQSTPTIVQLANLD
                     MMLNKMQIAEGDITKVKAGQDISFTILSEPDTPIKAKLDSVDPGLTTMSSGGYNSSTD
                     TASNAVYYYARSFVPNPDGKLATGMTTQNTVEIDGVKNVLLIPSLTVKNRGGKAFVRV
                     LGADGKAVEREIRTGMKDSMNTEVKSGLKEGDKVVISEITAAEQQESGERALGGPPRR
                     "
     gene            8422..8811
                     /locus_tag="ACFJAG_001093"
     CDS             8422..8811
                     /locus_tag="ACFJAG_001093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilin protein"
                     /protein_id="HFC3980391.1"
                     /translation="MKNVQKGFTLLELMIAVAILGILTLIAYPSYKTYIRRARLSEVK
                     STLLMNAQNLERYYRQKGTFEKYDSTKLKQNKYFKITLIKASPDHFTLQAAPDTATNE
                     GETCTVTLNDGGTIAASGTNQSCPGFD"
     gene            complement(8905..12390)
                     /gene="smc"
                     /locus_tag="ACFJAG_001094"
     CDS             complement(8905..12390)
                     /gene="smc"
                     /locus_tag="ACFJAG_001094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome segregation protein SMC"
                     /protein_id="HFC3980392.1"
                     /translation="MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAV
                     RWVLGEASAKQLRGESMQDVIFNGAATRRPAPRASVELVFDNSDHSLQGAWGQYAEVS
                     IKRQLTRQGESTYFINNQTVRRRDITDLFLGTGVGARGYAVIEQGMISRIIEARPEEL
                     RAYIEEAAGVSKYKERRKETEGRLKDTREHLQRLGDLQNELARQVEKLEKQAETAERY
                     KSLTAQLNQQQDLLDYAQWQQSLAAADKATAQHQSLQAQQDETAAQVQALNNEVHALQ
                     TAEQSQQQAVHELSNKRGVLREQIARLEEQIRHRQNLHQRIERDKQAAQAQLQRIRQE
                     QQQIRVQLEENELQVEEKQTELAEWAMQVAEHEERLPELEEVQATLNAAFQTQQDEAN
                     RIRRELALKQQQLAHAEQTVAKHEERKGRLKQENQALNLPDEAETAAAQEAAALLQSR
                     QEHYEEQIIAAEEALHAAREAFQTASNRFQSLKQQHITLQAQQQALSQILSQQQEAAD
                     FWQATDHAAAPQLWQHITAPAEWQHALSVILAERLHARSVPNSFVPPAPLPQGQAAWL
                     SDDLSGGIKKSLPVQALLNQIQAQPPFQTALHHWLDGVLCAPDLSYALAHQNDLGTHQ
                     IWLTPEGHQVDKVSVLLYAKPAQESLIAQKARLDGIAAELENLAPGLSAAEAAFKQTE
                     AAVRSSEVQHKNLMQQQQQHTRQYSQAQQRTAELLARTNQGQIRREHIERELAQLAEE
                     QTVLQHTSDGLSDDIATLQEAAAELEHQQQTTAHSRQEQQGRLKQAQLALLEANRQYG
                     LAEVAVHKLNQQKQNYRQQIARLEQQTLDWQERRQELALAYEAEFQNDEQHIKLDELT
                     ETVHTLDEEYIAVQEKLAQIQEQGREQYARVQTLQTKLPQLQAATQTALLQQQEALIN
                     AKRYHQNLTERAADLDALEALAKESAKVLNSSIGSLTRQIEALGAVNLAALQELEEAR
                     ERDGYYRSQSEDVQAAIALLEEAIAQIDDKTKARFKETFDAVNGKVQTFFPTLFGGGE
                     ATLKMIGDDLLTAGVSIMARPPGKKNSTIHLLSGGEKALTAMSLVFALFSLNPAPFCL
                     LDEVDAPLDDANTSRFCKLVKEMSVQTQFLYISHNRLTMEMAEQLVGVTMQEKGVSRV
                     VAVDIKQALEMAEAV"
     gene            12787..13455
                     /locus_tag="ACFJAG_001095"
     CDS             12787..13455
                     /locus_tag="ACFJAG_001095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980393.1"
                     /translation="MGLRQKLRGIIPNLATSIGTSAEANAPGALALRGSSEASKKFSI
                     AEGYLASSDGYGAIAIGSAAKIKQLEKGTINHIVGNDNKGLYVDADGNVTKITVRTES
                     EKDILSRYGQTYGAVALGFRSSSHNLFASSFGAFSTATAIESLAVGDSSQSTGYRSAT
                     FGSHSRALAEESLALGYETRANAYGSVALGAESVANEENTVSVGSDTLKRKIVNVADG
                     TEDL"
     gene            13436..13624
                     /locus_tag="ACFJAG_001096"
                     /pseudo
     CDS             13436..13624
                     /locus_tag="ACFJAG_001096"
                     /inference="COORDINATES: protein motif:HMM:NF015831.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YadA-like family protein"
     gene            13674..13907
                     /locus_tag="ACFJAG_001097"
     CDS             13674..13907
                     /locus_tag="ACFJAG_001097"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980394.1"
                     /translation="MPDRAFGAGVSWKFGGKPTPAVAAQNAAHPAKVLQLRQEVAALR
                     ARQAETDRKLHKQAEMENELQQLRRALSELKKH"
     gene            14116..14838
                     /gene="lpxH"
                     /locus_tag="ACFJAG_001098"
     CDS             14116..14838
                     /gene="lpxH"
                     /locus_tag="ACFJAG_001098"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008758 - UDP-2,3-diacylglucosamine
                     hydrolase activity [Evidence IEA];
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HFC3980395.1"
                     /translation="MRPSYFISDLHLSEKHPELTELLLRFLRSAAAGQARAVYILGDL
                     FDFWVGDDEVSELNTSVAREIRKLSDKGVAVFFVRGNRDFLIGRDFCRQAGMTLLPDY
                     SVLDLFGSNTLICHGDTLCTDDKAYLRFRRIVHCRRLQKLFLMLPLKWRTRLAAKIRR
                     VSKMEKQVKPADIMDVNAAFTARQVRAFNAERLIHGHTHREHIHHENGFTRIVLGDWH
                     NDYASILRVDGDGAVFVPLEKC"
     gene            15107..16693
                     /locus_tag="ACFJAG_001099"
     CDS             15107..16693
                     /locus_tag="ACFJAG_001099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HFC3980396.1"
                     /translation="MALFLSIFPIVLLIWLMVKKNSMPSYVALPITAVLIYAIKLFYF
                     GDAGMLLNATAASGLVKTLTPITVIFGAIMFNRMMETTGCIDVIRKWLATISPNPVAQ
                     LMIIGWAFAFMIEGASGFGTPAAIAAPILMSLGFNPLKVAIFTLVMNSVPVSFGAVGT
                     PTWFGFAPLNLSAEDILAIGRQTGVMHFFAGFVIPVIGLGFIVPWSEIRKNLGFVAIA
                     VFSCTIPYAALAMVNEEFPSLVAGAIGLMVSVFAANQGWGLSKDHAKDPNAEKVPFAQ
                     VAKALAPLGMLIGMLVVTRIKQLGIKGILTSKEEWFSFQLPFDLSKITVSDSLTITFG
                     NIFGQDVSASYQTLYVPAWIPFVLTVWICILLYKTKFKDAWTIYAVTFNQTKKPLLAL
                     MGALIMVQLMLVGGDNSMVKIIGKEFAAMAGEHWVYFSPYLGAIGAFFSGSNTVSNLT
                     FGPIQQQIALDTGLSVTLILALQSVGGAMGNMVCLNNIIAVCTVLDVKNSEGAIIKKT
                     VIPMAIYGVIAVVAAMIFFL"
     gene            complement(16859..17062)
                     /locus_tag="ACFJAG_001100"
     CDS             complement(16859..17062)
                     /locus_tag="ACFJAG_001100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-finger domain-containing protein"
                     /protein_id="HFC3980397.1"
                     /translation="MDNLNPQEISVLPENLPLYCSGPDNEQWNGHPRVFLPLGEGESG
                     SVACPYCGTRYRLDGKMPHHYYA"
     gene            17178..17675
                     /locus_tag="ACFJAG_001101"
     CDS             17178..17675
                     /locus_tag="ACFJAG_001101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-mimic protein DMP19"
                     /protein_id="HFC3980398.1"
                     /translation="MTALTLPEDIRQQEPSVLLYTLVSAYLEHTAQTGDESLSCLSDD
                     QHTLTAFCYLDSQVEEGGFVQLIASGYGEYIFRNPLADSLRRWKIKAVPKVLDKAKAL
                     YEQHGETIETLADGGADIESLRKQFPDFEEWDGAYYEAAEQDLPLLAEHILSNRAAFA
                     HIGQA"
     gene            17757..18947
                     /locus_tag="ACFJAG_001102"
     CDS             17757..18947
                     /locus_tag="ACFJAG_001102"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid aminotransferase"
                     /protein_id="HFC3980399.1"
                     /translation="MFFKHIEAAPADPILGLGEAFKAETRPEKVNLGIGVYKDASGAT
                     PIVKAVKEAEKRLLESETTKNYLTIDGVADYNEQTQILLFGKDHEIIASRRAKTAQSL
                     GGTGALRIAAEFAKRQLNAQTIWISNPTWPNHNAIAKAVGIQDKPYRYYDAAKHCLDW
                     DGMIEDLNQAQKGDIVLLHGCCHNPTGIDPTPEQWETLAKLSAEKGWLPLFDFAYQGF
                     GNGLEEDAYGLRVFLKHNTELLIASSYSKNFGMYNERVGAFTLVAEDEETAARAHSQV
                     KTIIRTLYSNPASHGANTIALVLKNDDLKAQWIAELDEMRGRIKAMRQKFVELLKAKG
                     STQDFDFIIEQNGMFSFSGLTPEQVDRLKNEFAIYAVRSGRINVAGITDDNIDYLCES
                     IVKV"
     gene            complement(18948..>19061)
                     /locus_tag="ACFJAG_001103"
     CDS             complement(18948..>19061)
                     /locus_tag="ACFJAG_001103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003755953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HFC3980400.1"
                     /translation="EPNPIEKVWANIKRYLRTVLSDYARFDDALLSYFDFN"
BASE COUNT         4107 a         5406 c         5017 g         4531 t
ORIGIN      
        1 gacgattgtg agggcgaaaa aagagctaaa aaagaattgg atgaaaaagg gttgtcaaaa
       61 ttagtcggta ttgttgcttt ggttacagtt gctagttgtg gtgcagataa tattggactt
      121 tttgttcctt actttgtgac tttagatctt gtcgacttat tagttactct tcttgtattt
      181 ttaatattga tttttgtttt agtatataca gcacaaagat tggctaatat ttcaggtgtt
      241 ggtgaaattg tagagaagtt tagtcgttgg ataatggctg ttatttatat tggtttaggg
      301 ttatttatta ttattgaaaa taatacaatt cgaacgataa tatcaataat atgaatgaca
      361 agggcatttc agtatctgac aaaccttgcg gttcgtttcc ctctccctaa ccctctccca
      421 caggagaggg gttcaggttg ctgaaaatca gagggcgaag gattggggat caaatggaag
      481 gtaaaacctg aaaatgttcg ggtttgacag cccgattccc tctccccgtg ggagagggct
      541 agggagaggg ctagggagag ggcaagcaag ccgcaggctt gcctctttgg cgaaaaatac
      601 aaccctgtcc gcccaataaa tccatacccg aaagcatctt catacagaat caagccaagc
      661 gatgaataaa ttttttaccc accctatgcg cccgtttttc gtcggtgcgg cagtacttgc
      721 catactcggt gcgttggtgt tttttcatca accccggcgc tatcatcctg caccgccaaa
      781 ttttcttgga acttatgctg ccggctgcat acggcggttt tttgactacc gctttgttgg
      841 accggacggg tttttcaggc aacctgaaac ctgccgctac tttgatggcg gtgttgttgc
      901 ttgttgcggc tgttttattg ccgtttttac cgcaacttgc cgcatttttc gtcgccgcct
      961 attggctggt gttgctgctg ttctgcgcct ggctgatttg gctcgaccgc aacaccgaca
     1021 acttcgccct cttaatgctg ctcgccgcat tcaccgtttt tcagacggcc tatgccgtca
     1081 gcggcgattt gaacttaact gcgcgcgcaa gtgcatttga atatggcggc ggtcatgttc
     1141 gtatccgtcc gcgtcagcgt ccttttgggc acggaaaccc tgaaagaatg ccgtctgaaa
     1201 gaccccgtat tcatccccaa cgttatctat aaaaacatcg ccatcaccct gctgctgcac
     1261 gccgccgccg aactttggct gcccgcgcaa accgccggtt ttactgcgct tgccgtcggc
     1321 ttcatcctgc tcgccaagct gcgcgaactg caccatcacg aactcttacg caaacactac
     1381 gtccgcactt attacctgct ccagctcttt gccgccgcag gttatctgtg gacaggcgcg
     1441 gcgaaactgc aaaacctgcc cgcctccgcg cccctgcacc tgattaccct cggtggcatg
     1501 acgggtggcg tgatgatggt gtggctgact gccggactgt ggcacagcgg ctttaccaaa
     1561 ctcgactacc cgaaactctg ccgcatcgcc gtctccatcc ttttcgcctc cgccgtttcg
     1621 cgcgctgttt taatgaacgt gaatccgata ttcttcatca ccgttcccga gattctgacc
     1681 gccgccgtgt tcatgcttta cctgctgacg ttcgtaccga tttttcgagc gaacgcgttt
     1741 acagacgatc cggaataaaa atgccgtctg aaacggtttt cagacggcat cggattgcca
     1801 atgatcaagc ctcctgcgga tcgacatcca ccgaccatcg gattttgccg tcgcggttct
     1861 gctgcaacac ctgcacccac aaactcacgg cgcggtgcaa atcttgtcgg gatgttgatt
     1921 cgaggaaaac ttgcgcacgt tcgcgttcgg caaggcgcac catcagcatc ggggcggcac
     1981 cgaaccggga gacgctttcg ggcaagagcg gggcgagggt ttctttggcg gcgttgagaa
     2041 attccatcgc atcggcaaca cgcggcgcat cggcacggac ggccgtctga aaaccgaaag
     2101 gcggcatggc gaacatttgc cgttcgttca attcgttttc ggcaaacacg gcgtagtcct
     2161 gcgctttgac ggcggcgaag acagggtgtt cgggcagttg ggtctgtatc agcaccttgc
     2221 cgggtttgtc ggcgcgcccc gccctgccgg acacttgcat cagctcggca aacagccttt
     2281 ccggcgcacg gaaatccgcg ctgtacaggc tgccgtcggc attcaacacg ataacgaggt
     2341 tgagccgcgc gaaatcatgg cctttggcaa gcatctgcgt gccgaccaga atgtcgattt
     2401 cgtcgttggc gatgcggcgg tacaaatctg cccagtcgtt tttgtgcgcc gtactgtccc
     2461 tatcgacgcg gacgacggct gccttgggca gcaaggcgcg cagggtttct tcgacgcgct
     2521 gcgtaccgtg tccgacggcg gtcaggtctt ggttgccgca gtcgggacat ttgaacggga
     2581 tgggttcgcg gtggtcgcag tggtggcagc gcagttggcg ggcgcgttgg tgcagcacca
     2641 ttttggcgga gcagttcggg cagccgaagg tatggccgca gtcgccgcaa aacagcgcag
     2701 gcgcgaagcc gcgccggtta aggtacacca gcgacatacc gcccgcttca aagttctgtt
     2761 tcaaaagctg caaggcttgc ggtgagaagc cgttatcgag tttcagacga cctatgttga
     2821 ggatgtccac ttgtggcagt tgcgcggaag catgggcgcg ttcggtcagt tgcagcaggc
     2881 ggtacgcgcc gctttgcgcc ttgtgccaac tctccaagct gggcgtggca ctgcccaaca
     2941 cgacgggaca gccgccctgc ttcgcccgcc acaccgccaa atcgcgggcg tggtagcgca
     3001 attcgttgtc ttgtttgaac gagccgtcgt gttcctcatc gaccacaatc agcccgacat
     3061 caggcaaagg cgtaaacacc gccagccgcg tgccgatcac cagcttcgcc tgccccaaca
     3121 tcgcgcgcag ataatcctgc gtgcgcctgc ctgccgccat ccggctgtgc aacacggcgg
     3181 tcggcacgtc ggcaaaacgg ttttccaccc gctttaaaag ctgcggcgtg aggttgattt
     3241 cgggcaacag aaacaacacc tgtcgcccct gcgccaacac tttcgccatc gcatcgaaat
     3301 acacctcggt cttgccgctg ccggtaatgc cgtacagcag aaacgaccgg aagcgtccca
     3361 atgccgtctg aatttgatcg gaagccttct gctggccggt atttaataca aattcagagt
     3421 gcgaagcctg cccgcggtac ggccttaaaa caggtttcgc cgcttccgtc gtttcaatcc
     3481 agccctgctc cgcccaatcc tcaatcaatt tcgccgcctg cgcgtttgcc tgtttcaacg
     3541 ccgccatcgt catttcgccc gacagcagcg cgtcccacaa agccgctttt ttgttgaacc
     3601 gagccggcgg cggcgtttgc gccctgcccg cttcgttcaa agcataaaac aacggcggct
     3661 gcggcatttc caccgcgcgc gtttccttca aaccctgcgg caatgcggca aatacagcct
     3721 gcccagtcgg atagtggtaa taacgcgacg taaacgccaa caaatcacgc cagctttgag
     3781 acagcggctt ttcttccaca aagaccgtct gaacgctcaa aatccgcgcc gcatccatat
     3841 cgggcgcaat atccgtttcc cacaccatcc cgacaacagt tttattgcga aaaggcacaa
     3901 gcacccgcgt tcccggagga agcggctcgg aatgcgaata agtcaaaagg ccgtctgaaa
     3961 gcggcacgtt tacagcgatg cgatggtaga tcatacaggc aggcaaatca tttttttgcg
     4021 tattttaaca gccggaagct attttcagac gataaattga gcctcggcgc aatgcaggcg
     4081 caacagaggt ttgatacaat gccacttttc caacacgctc aatcatcttt gatatgaaaa
     4141 ccaagttaat caaaatcttg acccccttta ccgtcctgcc gctgctggct tgcgggcaaa
     4201 cgcccgtttc caatgccaac gccgaatccg ccgtcaaagc cgaatccgcc ggcaaatccg
     4261 ttgccgcttc tttgaaagcg cgtttggaaa aaacctattc cgcccaagat ttgaaagtgt
     4321 tgagcgtcag cgaaacaccg gtcaaaggca tttacgaagt cgtcgtcagc ggcaggcaga
     4381 ttatctacac cgatgccgaa ggcggctata tgttcgtcgg cgaactcatc aacatcgaca
     4441 cgcgcaaaaa cctgaccgaa gaacgcgccg ccgatttgaa caaaatcgac ttcgcctccc
     4501 tgcctttgga caaagccatc aaagaagtac gcggcaacgg caagctgaaa gtcgccgtct
     4561 tctccgaccc cgattgtccg ttctgcaaac gcttggaaca tgagtttgaa aaaatgaccg
     4621 acgtgacggt ttacagcttt atgatgccca ttgccggcct gcacccagat gccgcgcgca
     4681 aggcgcaaat cttatggtgt cagcccgacc gtgccaaagc gtggacggat tggatgcgta
     4741 aaggcaaatt cccggtcggc ggcagcatct gcgacaatcc cgtcgcggaa accacttcct
     4801 tgggcgaaca gttcggcttc aacggcacgc cgaccctcgt cttccccaac gggcgcaccc
     4861 aaagcggtta cagcccgatg ccccaactgg aggaaatcat ccgcaaaaac cagcagtaaa
     4921 cccgcaatgc aaaaggcttg gaaccatgtt ccaagccttt ttcaaatgcc gtctgaagcc
     4981 tgtcgcggca gcttcagacg gcatctttgt tcaaacctca atcctgcgcc aatgcgtcta
     5041 tcggattgag tttggctgcc ttattggcag gcataaagcc gaacgcgatg ccgattccgg
     5101 tcgaacaggc gaccgccccg ataacggatg ccgccgaaat gtccatcggg aaatcggtta
     5161 caaaatgatt gaacacgagg ctgacggcgg cggacaaacc tacgccgacc aagcctccga
     5221 tgatgcagat taacaccgcc tcaatcaaaa actgctgcaa aatattgccg cgccgcgcgc
     5281 cgattgccat ccgtatgccg atttctttgg tgcgctcggt aacggacacc agcataatgt
     5341 tcatcacgcc gatgccgccg actaccaatg aaatcagggc gatggaggaa atcagcagct
     5401 tcatcgtacc ggtggtgctt tcgaccatct gcctgatgct gtcgctgttg ttcataaaga
     5461 agtcttccgt gccgtgccgt gctttgagca gctcggccag ccctttttcg gcaacccggg
     5521 tattggcatt gtctttgatt ttgacggtga tggagttggt gtggctctcg cctgtgattt
     5581 ggtgcatcac cgtcgtatag ggcgaccaaa gcatcagcac gtcggaattg ccgaaagcgt
     5641 tttcgtcttt tttcatcacg ccgatgacgg tcaaggggcg tttcctgaac aaaatggttt
     5701 tacccaacgg atccgagtcc gcaaagagtt tgtctttgac attttggtcg atgacgacga
     5761 cttgcgcgtc ttctttcaca tcgttctcat caaacagccg ccccgtttcc agcttcagcc
     5821 cgcgcacgtc gaaatattgt tcgcccacgc cgtacaaaga agcggtcagg tcggtattgc
     5881 ggtaggtcag cgtgccgccg ctcgaagtca tgggcgtggc ggaagcaacg tagctttgtt
     5941 tggcgatgat ttttgcgtcg tctatggtca gggttttgat tttgccgctg cgcctgtcgc
     6001 cgaagccgcg cccggggaag atgctgatgg tgttcgtccc catcgaactg atgtcttcga
     6061 ggattttttt ctgcgaaccg ttgcccaatg cgacgacgga gacaaccgaa gcgataccga
     6121 tgatgatgcc gagcatggtc agaagcgaac gcattttgtg cgccaatact gcttgcaccg
     6181 acattctgaa ggcttcgaca aactggtcgt aataaaacga ccacgaggct ttttcctgaa
     6241 tcctcccgac attgcttgcg gggatttcgg gatttttcga ggtgtcggaa atgatttcgc
     6301 cgtcccggat ttcgatgacg cggttggcgt tggcggcaat gccggggtcg tgcgtgacca
     6361 taatgacggt atgcccggct tcgtgcagcc tgcggatgat ttccatcaca tttttgccgc
     6421 tggcggtatc gagtgcgccg gtcggctcgt cggcgaagat gatttctccg ccgttcatca
     6481 gggcgcgggc gatggagacg cgctgctgct gtccgcccga gagttcgccg ggcttgttgc
     6541 cctctttact tgccaaaccc aaatcctgca agagtttgtc cgcccgcgcg gaacgctctt
     6601 tgccgcccat acccatatac acggctggca gcgcgacgtt gtcccttgcg gtcagcgagc
     6661 ttaagaggtt gtagcgttgg aagatgaaac cgaagcgttc gcggcgcaat gccgccagtt
     6721 cgtcaggctg cattttggca gtttcgatgc cgtcgattcg gtacgaaccg gaaccggcgg
     6781 tatccaaaca accgagtatg ttcatcagcg tggacttgcc cgaaccggac tgcccgatga
     6841 tggcgacaaa atcacccttc tctatcgaca ggctgatgtc tttcaaaata tggacgcggt
     6901 tctcgccgct gccgaagcag cggttgatgt ttttacattc gatcaagctc ataatgttcc
     6961 gtaaatcaat aacaaatgcc gtctgaaacc gtttccgtgt tcagacggca tattcgttta
     7021 tcggcgcggc gggccgccta gggcgcgttc gccgctttcc tgctgctcgg cggcggttat
     7081 ttcggagatg accactttgt ccccctcttt caacccgctt ttcacttcgg tattcatact
     7141 gtctttcata ccggtccgga tttcgcgttc cactgccttg ccgtccgcac ccaacacgcg
     7201 tacgaacgcc ttgccgccgc gatttttcac ggtcagcgac ggaataagca acacattttt
     7261 cacaccgtcg atttcaaccg tattctgcgt cgtcatcccc gtggcgagtt tgccgtccgg
     7321 attcggcaca aacgaacggg cataataata gaccgcattg gaagccgtat ccgtactgct
     7381 gttgtagccg cccgacgaca tcgtggtcag cccggggtcg acgctgtcga gcttcgcctt
     7441 aatcggcgta tccggttcgg acaaaatcgt aaacgaaata tcctgccccg ccttcacctt
     7501 ggtaatatcg ccctcggcaa tctgcatttt gttcaacatc atatccagat tcgccaattg
     7561 gacaatcgtc ggcgtagact gcgccgcgtt cacagtctgc ccctcttcca cgggaatcgc
     7621 caccaccgtg ccgtccatcg tcgcggtaat gcgcgtgtag cccaaatccg actcggcggt
     7681 attgatggaa attttgctct gtctgattaa agccttcaac tcggcaacat tggctttggc
     7741 ggcggcaagc gcatcctgcg cgctttccaa atcttcttta gaggtcgcat catccttcca
     7801 caacgccgcc tgacgcttat atttcttctc cgcgctgccc aatgcaatct gtgccgacac
     7861 cagcttcgcc tgatacgttt ccaatttgga tttttccata tcgatcgtgt tggtctgcgt
     7921 ggtcgaattg atttccgcaa tcaaatcgcc ctttttgacc tgttgcccga gtttgacata
     7981 aagcttttta atctgccccg aagcctgcgc gccgaccgat accaggttgg acggcgaaat
     8041 ctcgcccgtc gcggaaaccg tccggctgat gtcgccgcgc ctgaccgttt ccgtaatata
     8101 agcagcctgc ggctcgggct tcagataaga ccatccgccc caaaccgctg ccgccgcgac
     8161 tgccgcaaca gccgaccatt tcatcatttt cgccatattt tcaattctct gtatgcgtca
     8221 atcccataaa ccggaagcgg attctaccgc aagtccctgc cccatccaag gcggcaaacc
     8281 gccgacaata aaaataacca tttgttttaa atggcttata caatctgctt tcccgaaaat
     8341 ttcaatccgt ttacatattc cgccatttcc gatacggcgt tataatgccg cccacaaaca
     8401 accaaatgga aacacattgc tatgaaaaac gttcaaaaag gctttacgct gctcgagctg
     8461 atgattgccg tcgccatcct cggcatcctg acgctcatcg cctacccttc ctataaaacc
     8521 tacatccggc gcgcccgcct gtcggaagtc aaatccaccc tgctgatgaa cgcgcaaaac
     8581 ttggagcgtt actaccgcca aaaagggacg tttgaaaaat acgactcaac caaactgaaa
     8641 caaaacaaat atttcaagat taccttaatc aaagccagcc ccgaccactt cacccttcag
     8701 gccgctcccg atacggcgac caacgaaggc gaaacctgca ccgttacgct caacgacggc
     8761 ggtaccattg ccgcttccgg tacaaaccaa tcctgccccg gcttcgactg attggctgtt
     8821 gcagtcggca ttgtgcctaa accatctata aaaatgccgt ctgaacgctg ttcagacggc
     8881 atttttgaca tcccgatacg cctttcaaac ggcttccgcc atttccaacg cctgcttgat
     8941 gtctacggcg acgacgcgcg acacgccttt ttcctgcatg gttacgccga ccagctgctc
     9001 cgccatttcc atggtcaggc ggttgtggga gatgtagagg aactgggttt gcaccgacat
     9061 ttctttgacc agcttgcaga aacgcgaggt gttggcatcg tccagcgggg catcgacttc
     9121 gtccagaagg cagaaggggg cggggttgag gctgaacagg gcgaacacga ggctcatggc
     9181 ggtgagggct ttttcgccgc cggagaggag gtggatggtg ctgtttttct tgccgggcgg
     9241 acgcgccatg atggacacgc cggcggtcag gaggtcgtcg cctatcattt tgagggtggc
     9301 ttcgccgccg ccgaacaggg tcgggaagaa ggtttggact ttgccgttga cggcgtcgaa
     9361 agtttctttg aaacgcgctt tggttttgtc gtcgatttgg gcgatggctt cttccaaaag
     9421 cgcgatggcg gcctgcacgt cttcgctctg gctgcggtag tagccgtcgc gttcgcgcgc
     9481 ttcttcgagt tcttgcaggg cggcgaggtt gacggcgccg agggcttcga tttgccgggt
     9541 aaggctgccg atgctgctgt tcaatacttt cgccgattct ttcgccaacg cttcgagcgc
     9601 gtccagatcg gcagcgcgtt cggtcaggtt ttgatggtag cgtttggcgt tgatcagggc
     9661 ctcctgctgc tgcaacaggg cggtttgggt ggcggcctga agctgcggca gcttggtttg
     9721 cagggtttgt acgcgggcgt attgctccct gccctgttcc tgaatctgcg cgagtttttc
     9781 ctgcacggcg atgtattctt cgtccagcgt gtgtacggtt tcggtcaact cgtcgagctt
     9841 gatgtgctgc tcgtcgtttt ggaactcggc ttcataggcg agggcaagct cttgccggcg
     9901 ttcctgccag tccagggttt gctgttcgag ccgggcgatt tgctgccggt agttttgttt
     9961 ttgctggttg agtttgtgga cggcgacttc ggcaagcccg tattggcggt tggcttccaa
    10021 cagggcaagc tgcgcctgtt tcagacggcc ttgctgctct tggcggctgt gcgcggtggt
    10081 ttgctgctgg tgttcgagtt cggcggcggc ttcctgcaaa gtagcgatgt cgtctgaaag
    10141 cccgtcggac gtgtgttgca acacggtctg ctcttccgcc aactgtgcca gttcgcgctc
    10201 gatgtgttcg cggcggattt gcccttggtt ggtgcgcgcc agaagttcgg cggtgcgttg
    10261 ctgcgcttgg ctgtattggc gcgtgtgttg ctgttgctgc tgcatcagat ttttgtgctg
    10321 cacttcggac gagcgcacgg cagcctccgt ctgtttgaac gcggcttcgg cggcggaaag
    10381 tccgggggcg aggttttcca gttcggccgc gatgccgtcg aggcgcgctt tttgggcaat
    10441 caggctttcc tgcgcgggct tggcatagag caggacgctg accttatcga cctgatggcc
    10501 ttcgggtgtg agccagattt gatgcgtgcc caaatcgttt tgatgcgcga gggcgtagct
    10561 caaatcgggc gcgcacaata cgccgtcgag ccagtggtgc aatgccgtct gaaacggcgg
    10621 ctgcgcttgg atttggttca gcaatgcctg tacgggcagg gattttttga tgccgccgga
    10681 gaggtcgtct gaaagccatg ccgcctgccc ctgcggcaaa ggtgcgggcg gtacgaaact
    10741 attcggcacg ctacgggcgt gcaggcgttc ggcaaggatg acggacaggg cgtgctgcca
    10801 ctcggcgggc gcggtgatgt gttgccacag ttgcggcgcg gcggcgtggt cggttgcctg
    10861 ccaaaagtcg gcggcttcct gctgttgcga caggatttgc gacaacgcct gctgctgcgc
    10921 ctgcaaggta atgtgttgct gcttcaggct ttggaagcgg tttgaggccg tctgaaacgc
    10981 ctcgcgggcg gcgtgcaagg cttcttcggc ggcaatgatt tgttcttcgt aatgctcttg
    11041 ccggctttgc aacaaggcgg cggcttcctg agcggcggcg gtttcggcct cgtcgggcag
    11101 gttcagggct tggttttcct gcttcagacg gcctttgcgc tcttcgtgct tggcaacggt
    11161 ttgttcggca tgggcaagct gctgctgctt caacgccagt tcgcggcgga tgcggtttgc
    11221 ctcgtcctgc tgggtttgga aggcagcgtt gagcgtggct tggacttctt ccaattcggg
    11281 cagacgctct tcgtgttcgg caacctgcat cgcccattcc gccaattcgg tttgcttttc
    11341 ttcgacctgc aactcgtttt cctcaagctg cacgcggatt tgctgctgct cctgccggat
    11401 gcgttgcaac tgcgcctgcg ctgcctgctt gtcgcgttcg atgcgttggt gcaggttttg
    11461 ccggtggcgg atttgttctt ccaaacgggc aatctgctcg cgcaacacgc cgcgtttgtt
    11521 gctcaattcg tgtactgcct gctgctgcga ctgttcggca gtctgcaagg cgtgtacttc
    11581 gttatttaac gcctgaacct gtgcggcggt ttcatcctgc tgcgcctgca aagattgatg
    11641 ctgcgcggtc gccttgtcgg cggcggcaag cgattgctgc cattgggcgt aatcgagcaa
    11701 atcctgttgt tgattcaact gcgcggtcag ggatttgtag cgttcggcgg tttccgcctg
    11761 tttttccagc ttttccacct gacgcgccaa ctcgttctgc aaatcgccca aacgctgcaa
    11821 atgctcgcgc gtgtctttca gacggccttc cgtctccttg cggcgttcct tatatttgga
    11881 cacgcccgcc gcctcctcga tataggcgcg caactcctcc ggccgcgctt cgatgatgcg
    11941 cgaaatcatc ccctgctcaa tgacggcata accgcgcgcg cccacgcccg tacccaagaa
    12001 caaatcggta atatcgcggc ggcgcacggt ctgattgttg atgaaataag tcgattcccc
    12061 ctgacgcgtc agctgtcgct tgatgctcac ctcggcatac tgcccccacg cgccctgcaa
    12121 actgtggtcg ctgttgtcaa ataccagctc caccgaagcc ctcggcgcag gacggcgcgt
    12181 cgccgcaccg ttaaaaatca cgtcctgcat actctcgccg cgaagctgct tcgccgaagc
    12241 ctcgcccaac acccagcgca ccgcgtcaat cacattcgac ttgccgcagc cgttcggccc
    12301 gataaccgcg acaagctgcc ccggaacatg aatcgtggtc gggtcggtaa aagatttgaa
    12361 gccggagagt ttgatgtggg tcaggcgcat aatggtcgga aaaaataaaa aagaagcgta
    12421 ttttaacgga aatcccgccg caccacccca tatcttgccg gcaaaacctt accgcatccc
    12481 gccccggtgc ggcaggattt tgcacatccc ggccatccgt attaaaatct ttgcgtttcc
    12541 cacactttcc tgacaaatat acggaggagg attccatgaa aacaaaaaca gtcaagcaag
    12601 caagcaagca agcaagcaag caagcaagca agcaagcaag caaaatagtc taacccccct
    12661 ttctttaatc gctctactta atttccactt ctttttatcc tgttcgatct tttgcggctg
    12721 cacctcaaga aataaactat tcgttatcag gcggtaaagt ttacgcagat aagttcagta
    12781 tcgccattgg ggttgaggca aaagctcagg gggataatac caaacttagc aacctcaatc
    12841 ggcacatctg ccgaagcaaa tgcacccggg gcattggctt taaggggaag ttctgaagca
    12901 tcgaaaaaat ttagtatagc agaaggctat ctggcatcta gtgatggcta tggtgcaata
    12961 gcgattggtt ctgccgccaa gataaagcaa ttggaaaaag gcacaataaa tcatattgtg
    13021 ggaaacgata ataaaggtct ttatgtcgat gcagacggca atgtaacaaa gataaccgta
    13081 aggactgagt cggaaaaaga tattctctca agatacggtc aaacttacgg tgcggtggca
    13141 ctagggttta gatcttcttc acataatctt tttgccagtt catttggagc gttttctaca
    13201 gccacagcta ttgaaagctt ggcagtcggc gacagcagcc aatcaacggg ctaccgcagt
    13261 gctacttttg gcagtcacag cagggctttg gcagaagaaa gtttggcatt aggttatgaa
    13321 actcgggcaa atgcttatgg ttctgttgct ttaggtgcag aatctgtggc gaatgaagaa
    13381 aataccgtat cagtgggttc cgatacattg aaacggaaaa tcgttaatgt cgccgatggc
    13441 acggaagatt tatgatgcag taaatgtccg ccagttgaac cgcttaagca aacgtacaaa
    13501 ccgcgtcggc gcaagtgctg cggcgttggc ttcgttaaaa cctgcacaat taggcaaaaa
    13561 cgacaaattc gccttttctt tgggctttgg aagctataaa aatgcccaag cggtggcaat
    13621 gggggcggtg tttaagcccg ctgaaaatgt gttgcttaat gtggcgggca gttttgccgg
    13681 accgggcttt cggcgcgggg gtttcttgga aattcggcgg caaaccgaca cctgcggttg
    13741 ccgcacaaaa cgcggcgcat cctgcaaaag ttttgcaatt gcggcaggaa gtggcggcgt
    13801 tgcgcgcccg gcaggcagaa accgaccgca aactgcacaa acaggccgaa atggaaaacg
    13861 agctgcaaca gttgcgccgc gcgttgtccg aattgaaaaa acattgaagc aataaacgta
    13921 aggcgggacg gcggctctgc ctttttccga tgccgcaccc gcgcgatgcc gtctgaagcc
    13981 ttcagacggc atttttaacg cgcccgaacc ccggttccgc caatgcccga tgcttggcgc
    14041 ggcatttgcc gtattgcccc gccgccgggc gcgttataat ccgccacgac atccgcccga
    14101 tttggaaacc tgcctatgcg accctcctat ttcatttccg acctgcattt gagcgaaaag
    14161 caccccgaac tgaccgaact gctgctgcgt tttttacgtt ctgccgccgc cgggcaggcg
    14221 cgggcggttt atattttggg cgatttgttt gatttttggg tgggcgatga cgaagtttcc
    14281 gagttgaata cttcggttgc gcgggaaatc aggaaattgt ccgacaaagg cgttgccgtg
    14341 ttctttgtca ggggcaaccg cgatttccta atcggtcggg atttttgccg gcaggcgggt
    14401 atgacgctgc tgccggatta ctcggttttg gacttgttcg gcagcaacac cctgatttgc
    14461 cacggcgaca cattgtgcac cgacgacaag gcatacctgc gtttccgccg catcgtgcat
    14521 tgcaggcggc tgcaaaaact gttcctgatg ctgcccctga agtggcgcac gcgccttgcc
    14581 gccaaaatca ggcgtgtcag caaaatggaa aaacaggtca agcccgccga tattatggat
    14641 gtcaatgccg cctttaccgc gcggcaggtt cgcgccttta acgcggaaag gctgatacac
    14701 ggacacaccc accgcgagca tatccatcac gaaaacggct ttacccgcat cgttttgggc
    14761 gactggcata acgactatgc ttcaatcctc cgcgtggacg gggacggcgc ggtattcgtg
    14821 ccgctggaaa aatgctgaaa atgccgtctg aagcctttcg ggcggctttt tctacacgcc
    14881 cctttcccac actccctccg ccgcatcatc accatcctta acccgcatta atagccatta
    14941 tcgataaaat gcttgaccga ttacataaga ttacgtaaag tgtgcaaacg cataataatt
    15001 ggtcttacca atttatcttt taaccaaaat atcgggtgtg cgggatttga acgtctttcc
    15061 aaacctcgac gcgccttatg atgcaaatgc ctaaaaagga ttcgttatgg cacttttcct
    15121 cagcatattc cccatcgtcc tgctgatttg gctgatggtg aaaaaaaaca gtatgccttc
    15181 ctacgtcgca ctgccgatta ccgcagtgct gatttacgcc atcaaacttt tctacttcgg
    15241 cgatgcggga atgctgctca acgccaccgc cgcttccggc ctcgtcaaaa cgctcacgcc
    15301 gattaccgtg attttcggcg cgattatgtt caaccgtatg atggaaacca cgggctgcat
    15361 cgatgtcatc cgcaaatggc tggcgaccat cagcccgaac cccgtagcgc aactgatgat
    15421 tatcggctgg gcttttgcct ttatgattga aggcgcatcc ggcttcggca cgcctgccgc
    15481 gattgccgcg ccgattctga tgagcttggg cttcaatccg ttgaaagtgg cgattttcac
    15541 tttggtgatg aattccgtgc cggtatcgtt cggcgcggtc ggtacgccga cctggttcgg
    15601 tttcgcaccg ctgaacctga gtgccgaaga catcctcgcc atcggcaggc agaccggcgt
    15661 gatgcacttc ttcgcaggtt tcgtcatccc tgtcatcggt ttgggcttca tcgtgccttg
    15721 gtctgaaatc cgcaaaaact tgggcttcgt cgccattgcc gtcttctcct gcaccattcc
    15781 ttatgccgca ttggcgatgg tcaacgaaga attcccgtcg ctcgtcgccg gcgcaatcgg
    15841 cctgatggtg tccgtattcg ccgccaacca aggctggggc ttgagcaaag accacgccaa
    15901 agacccgaat gccgaaaaag tgccgttcgc ccaagtcgcc aaagcactcg cccctttggg
    15961 tatgctgatc ggcatgctgg tggttacccg catcaaacag ctcggaatca aaggcatttt
    16021 gaccagcaaa gaagaatggt tcagcttcca actgccgttt gatttgtcca aaattaccgt
    16081 cagcgactcc ctgacgatta ccttcggcaa tattttcgga caagatgtca gcgcgtctta
    16141 ccaaacgctg tacgtcccgg cttggattcc gttcgtgctg accgtttgga tttgcatcct
    16201 gctgtataaa accaaattca aagatgcctg gacgatttat gccgtaacct tcaatcaaac
    16261 caaaaaaccg ctgcttgccc tgatgggtgc gctgattatg gttcagctga tgctggtcgg
    16321 cggcgacaat tcgatggtga aaatcatcgg taaggaattt gccgcaatgg cgggcgaaca
    16381 ctgggtttat ttttcgccgt atctgggcgc gatcggtgcg ttcttctccg gctccaacac
    16441 cgtgtccaac ctgaccttcg gtccgattca gcagcaaatc gcccttgata ccggcctgtc
    16501 cgtgaccctg attctggcgt tgcagtccgt cggcggcgcg atgggcaata tggtgtgcct
    16561 caacaacatc atcgccgtat gtaccgtatt ggacgtgaaa aattccgaag gtgcgattat
    16621 caagaaaacc gttatcccga tggcgattta cggcgtgatt gccgtcgtcg cggcaatgat
    16681 tttcttcctc taggcgaaac gccgccatcc atagcggcag cacgcgggga acggaaaccg
    16741 ccgctcgtcc gggcggcgcg tcgggcagaa tcccggtgcc ggaacagccc gccccgccaa
    16801 acaaatgccg tctgaaaccg gaaaaggctt cagacggcat ttttatcgcc gtttgcattc
    16861 aggcgtagta atgatgcggc atcttgccgt caaggcggta gcgcgtgccg caatacgggc
    16921 aggcaacgct gcccgattct ccttcgccca aaggtaaaaa caccctcgga tgcccgttcc
    16981 actgctcgtt gtccggtccc gagcaataca gcggcagatt ttccggcaac acggaaattt
    17041 cctgcggatt cagattgtcc atttgatttt cctttgcgtg gttggcgtgc gcccatttta
    17101 cgccatcggc aggctaaagg atattttcgg cgcaaagccg caatccgcta taatccccac
    17161 ttttcagacg gcataccatg actgcgctta cccttcctga agacatccgc caacaagaac
    17221 catccgttct gctctatacc ctcgtttccg cctacctcga acacaccgcc caaaccggcg
    17281 acgaatccct ctcctgcctg tccgacgacc agcacacgct gaccgcattc tgctacctcg
    17341 acagccaagt cgaagaaggc ggcttcgtac agcttatcgc ctccggctac ggcgaataca
    17401 ttttccgcaa cccgcttgcc gacagcctgc gccgctggaa aatcaaagcc gtgccgaaag
    17461 tcttggacaa agccaaagcc ctctacgaac aacacggcga aaccatcgaa acgctcgccg
    17521 acggaggcgc agacatcgaa tccctgcgca aacagttccc cgactttgaa gaatgggacg
    17581 gcgcatacta cgaagccgcc gaacaagacc tgcccctgct tgcagaacac atcctgtcaa
    17641 accgggcggc attcgcccat atcgggcagg cgtgattgcg tctgtttcca gcccgtgtaa
    17701 aacagcgtaa aatcggcaaa cccgaattat cttccgtccc catcaaggag caagctatgt
    17761 tcttcaagca catcgaagcc gcccccgccg atccgattct cggtttgggc gaagcgttca
    17821 aagccgaaac ccgccccgaa aaagtcaacc tcggcatcgg cgtgtacaaa gacgcatccg
    17881 gcgcgacacc cattgtcaaa gccgtcaaag aggctgaaaa acgcctgttg gaaagcgaaa
    17941 ccaccaaaaa ttacctgacc atcgacggcg ttgccgacta caacgagcaa acccaaatcc
    18001 tgctgttcgg caaagaccac gaaatcatcg ccagccgccg cgccaaaaca gcgcaaagcc
    18061 ttggcggtac aggcgcattg cgtattgcgg ccgaatttgc caaacgccag ttgaacgcgc
    18121 aaaccatctg gatttccaat ccgacctggc caaaccacaa cgccattgcc aaagcggtcg
    18181 gtatccaaga caaaccttat cgctactatg atgccgccaa acactgcttg gattgggacg
    18241 gcatgattga agatttgaac caagcgcaaa aaggcgacat cgtcctgctg cacggctgct
    18301 gccacaaccc taccggtatc gaccctacgc ccgaacaatg ggaaacttta gcaaaacttt
    18361 ctgccgaaaa aggctggctg ccattgtttg actttgccta ccaaggcttc ggcaacggtt
    18421 tggaagaaga tgcctatggc ttgcgcgtgt tcttgaaaca caatacagaa ttgctgattg
    18481 ccagctctta ttccaaaaac ttcggcatgt acaacgagcg tgtcggtgca ttcactttgg
    18541 tggccgaaga tgaagaaaca gcagcccgcg cccacagcca agtcaaaacc atcatccgta
    18601 ccttgtattc caacccggct tcacatggtg cgaacaccat tgcactggtg ttgaaaaatg
    18661 atgatttgaa agcacaatgg attgccgaac tcgatgaaat gcgcggccgc atcaaagcca
    18721 tgcgccaaaa atttgtcgag ttgctcaagg ccaaaggttc aacccaagac tttgatttta
    18781 ttattgaaca aaacggtatg ttctctttca gcggcttgac tcccgaacaa gttgaccgtt
    18841 tgaaaaacga gtttgccatt tatgccgtcc gttccggccg catcaacgtc gccggcatta
    18901 ccgacgacaa catcgattat ctgtgtgaaa gcatcgtgaa agtatagtca attaaaatca
    18961 aaataggaca gtagtgcatc gtcaaatcgg gcgtaatcag acaaaacggt tcgcagatac
    19021 cgcttaatat tcgcccacac tttctcaatc gggttgggct c
//
LOCUS       DAXFZM010000038        19010 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.038, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000038 DAXFZM010000000
VERSION     DAXFZM010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19010)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19010)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19010
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.038"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            283..573
                     /locus_tag="ACFJAG_001104"
     CDS             283..573
                     /locus_tag="ACFJAG_001104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HFC3980401.1"
                     /translation="MTIRPLHDRVVVKRLEAEEKTASGIVLPGAAAEKPDMGEVIAVG
                     AGKIGKDGARRPLDVKAGDKIIFGKYSGQTVKADGEELLVMREEDIFGIVEK"
     gene            665..2299
                     /gene="groL"
                     /locus_tag="ACFJAG_001105"
     CDS             665..2299
                     /gene="groL"
                     /locus_tag="ACFJAG_001105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271863.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA];
                     GO_process: GO:0042026 - protein refolding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HFC3980402.1"
                     /translation="MAAKDVQFGNEVRQKMVNGVNILANAVRVTLGPKGRNVVVDRAF
                     GGPHITKDGVTVAKEIELKDKFENMGAQMVKEVASKTNDVAGDGTTTATVLAQSIVAE
                     GMKYVTAGMNPTDLKRGIDKAVAALVEELKNIAKPCDTSKEIAQVGSISANSDEQVGA
                     IIAEAMEKVGKEGVITVEDGKSLENELDVVEGMQFDRGYLSPYFINDAEKQIAGLDNP
                     FVLLFDKKISNIRDLLPVLEQVAKASRPLLIIAEDVEGEALATLVVNNIRGILKTVAV
                     KAPGFGDRRKAMLQDIAILTGGVVISEEVGLSLEKATLDDLGQAKRIEIGKENTTVID
                     GFGDAAQIEARVAEIRQQIETATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEK
                     KDRVEDALHATRAAVEEGVVAGGGVALLRARAALENLHTGNADQDAGVQIVLRAVESP
                     LRQIVANAGGEPSVVVNKVLEGKGNYGYNAGSGEYGDMIGMGVLDPAKVTRSALQHAA
                     SIAGLMLTTDCMIAEIPEEKPAVPDMGGMGGMGGMM"
     gene            3004..4539
                     /locus_tag="ACFJAG_001106"
     CDS             3004..4539
                     /locus_tag="ACFJAG_001106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HFC3980403.1"
                     /translation="MSDSKTKERATFGTRRAFMIAAIGSAVGLGNIWRFPYIAFENGG
                     GAFILPYLVALLTAGIPLLLLDYAIGHRYRGSAPLAFRRLGRWFEPVGWWNVMTNIVI
                     CIYYAVIIGWAASYTYYSVNAAWGADPQGFFFKDFLQMAGPEALGLDFVGKVAGPLAG
                     VWVFTAAIMALGVQKGVARASSFFMPLLLVMFLIMVGISLTLPGAAKGLDALFTPDWS
                     KLADSKVWVAAYGQIFFSLSICFGIMVTYSSYLKKKTDLGGTGLVVGFANSSFELLAG
                     IGVFAALGFMAQAGGKAVNEVASGGIGLAFIAFPTIINQAPMGWLIGILFFGSLVFAG
                     VTSMISILEVIVAAIQDKLNIGRVNATLLVCIPMGIVSTLLFGTATGLPVLDVMDKFV
                     NTYGIVAAGFVYVAAIIIGGRLPELRRHLNALSSIRVGGLWTACVVFTVVMLGYMLYQ
                     DTAGLLEKNYGDYPDGFLNIFGWGMSAALIMFGLLLSLLPWKHGQDFNVKDEHEHEQG
                     GEK"
     gene            4536..4628
                     /locus_tag="ACFJAG_001107"
     CDS             4536..4628
                     /locus_tag="ACFJAG_001107"
                     /inference="COORDINATES: protein motif:HMM:NF028261.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine/alanine import family NSS transporter
                     small subunit"
                     /protein_id="HFC3980404.1"
                     /translation="MSTSAIVMMVAAIAVIWGGLLLSLLRLPEE"
     gene            complement(4680..5102)
                     /locus_tag="ACFJAG_001108"
     CDS             complement(4680..5102)
                     /locus_tag="ACFJAG_001108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-antitoxin system YwqK family antitoxin"
                     /protein_id="HFC3980405.1"
                     /translation="MKHAPIILLLTASSAALLSAGCTALPSDRPPLRTLPKSAPIQPA
                     NPYSRPPSGTPDGAFSTRASNGRVLKSIVKNGVFDRFVDIYHPNGKLHSHTPVENGVA
                     QGYTEQGILRTRILYRDGHIVRAQTLDASGKVEREWQP"
     gene            complement(5296..6516)
                     /gene="lysA"
                     /locus_tag="ACFJAG_001109"
     CDS             complement(5296..6516)
                     /gene="lysA"
                     /locus_tag="ACFJAG_001109"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008836 - diaminopimelate decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HFC3980406.1"
                     /translation="MTLFCEQVPYPRLAEEFGTPLYVYSQSALTGAFENYQTAFAALN
                     PLVCYAVKANGNLSIIKHFASFGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAE
                     IEFALNAGVKCFNMESIPEIDRIQKIAARLGKTAPVSLRVNPDVDAKTHPYISTGLKA
                     NKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLTDLSPLVEACERILILVDALAA
                     EGIVLEHLDLGGGVGIVYKDEGVPDLGAYARAVQKLMGTRRLKLILEPGRSLVGNAGA
                     LLTRVEFVKHGEEKNFVMVDAAMNDLMRPALYDAYHHIEAVETKNIEPLTANIVGPIC
                     ETGDFLGKDRTIACEEGDLLLIRSAGAYGASMASNYNTRNRAAEVLVDGGGYKLIRRR
                     ETLEQQMANELACL"
     gene            complement(6527..6697)
                     /locus_tag="ACFJAG_001110"
     CDS             complement(6527..6697)
                     /locus_tag="ACFJAG_001110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HFC3980407.1"
                     /translation="MKYGVFFAAATALLLSACGYKGGLYLPKEGDTARFGVIQTGLQL
                     QGKPQSAPPTQK"
     gene            6768..7091
                     /gene="cyaY"
                     /locus_tag="ACFJAG_001111"
     CDS             6768..7091
                     /gene="cyaY"
                     /locus_tag="ACFJAG_001111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron donor protein CyaY"
                     /protein_id="HFC3980408.1"
                     /translation="MMTESEFIRASEALFEHIEDQIDENGWDFDCRFAGNVLTIEAGD
                     GTQIIVNRHTPNQELWIAAKSGGYHFAEQNGKWLATRDSRDFYDVLNEALSAASGEAV
                     EIAEL"
     gene            7124..7543
                     /locus_tag="ACFJAG_001112"
     CDS             7124..7543
                     /locus_tag="ACFJAG_001112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2251 domain-containing protein"
                     /protein_id="HFC3980409.1"
                     /translation="MAQLPLYRTAEIGNFTVGTPKVLESFSKHIPYGVVFEDDGNTGY
                     FYAASQEGILDALHIYNVEDVSDKHIPNHVLILWDGACTIAALCINDYIHAVYDFVEQ
                     AGYCRNGFPEAGGEWVKVENRVLDDELLDKILSRKPT"
     gene            7565..8071
                     /gene="luxS"
                     /locus_tag="ACFJAG_001113"
     CDS             7565..8071
                     /gene="luxS"
                     /locus_tag="ACFJAG_001113"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HFC3980410.1"
                     /translation="MPLLDSFKVDHTRMHAPAVRVAKTMTTPKGDTITVFDLRFCIPN
                     KEILPEKGIHTLEHLFAGFMRDHLNGAGVEIIDISPMGCRTGFYMSLIGTPSEQQVAD
                     AWLASMQDVLNVKDQSKIPELNEYQCGTYLMHSLAEAQQIAQNVLARKVAVNRNGDLA
                     LDESLLNA"
     gene            8216..11008
                     /gene="polA"
                     /locus_tag="ACFJAG_001114"
     CDS             8216..11008
                     /gene="polA"
                     /locus_tag="ACFJAG_001114"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006261 - DNA-templated DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HFC3980411.1"
                     /translation="MSNRPTLLLVDGSSYLYRAYHAMGQNLTAPDGAPTGALYGVLNM
                     LRRLRSEYPHDYCAVVFDAKGKNFRHQMFEEYKATRPPMPDDLRPQAEALPDLVRLTG
                     WPVLVIGQVEADDVIGTLAKQGAEHGLRVIVSTGDKDMAQLVDERVTLVNTMSGETLD
                     IEGVKAKFGVRPDQIRDYLALIGDKVDNVPGVEKCGPKTAVKWLEAYGSLQGVMEHAP
                     EIKGKVGENLQAALPQLPLSYDLVTIKTDVDLHTELSDGIESLRRTAPKWAQLAVDFK
                     RWGFRTWLKEAESNMNTGSTDDLFGSDSIGEQAALNAEIPSEKRAEKATAPEKLDYQA
                     VTTEAQFAALLDKLAKADTIGIDTETTSLDAMNAELVGISIAFQAGEAVYIPVGHSLT
                     AAPEQLDLQDVLGRLKPHLENPALKKIGQNLKYDQHVFANYGIALNNIAGDAMLASYI
                     IESHLGHGLDELSGRWLGLETITYESLCGKGAKQISFADVAIGQATEYAAQDADFALR
                     LEARLRAQMDDKQLEMYEKMELPVAQVLFEMECNGVQIDRAELARQSAELGAELMKLE
                     QEAYAAAGQPFNLNSPKQLQEILFDKMGIPTKGLKKTAKGGISTNEAVLEQLAPDYPL
                     PKIILQNRSLAKLKSTYTDKLPEMISPRDNRVHTTYAQAVAITGRLASNNPNLQNIPI
                     RTAEGRRVRRAFTAPPGSVIVSADYSQIELRIMAHLSGDKTLIAAFQSGEDVHRRTAA
                     EVFGTAPENVSPEQRRYAKTINFGLIYGMGQYGLAKSLGIDNLSAKNFIDRYFARYPG
                     VAEYMQRTKEQAAAQGYVETLFGRRLYLPDIRNKNANARAGAERAAINAPMQGTASDL
                     IKRAMINVRNWLSDGIGSKLVMQVHDELVLEVVETELDFVKEKLPQIMAKVDGGLLDV
                     PLVAEVGVGENWEEAH"
     gene            11570..12265
                     /locus_tag="ACFJAG_001115"
     CDS             11570..12265
                     /locus_tag="ACFJAG_001115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HFC3980412.1"
                     /translation="MFPDKYKLSLEENIFLAKKVLVAQIHNLSRFENCQTTLLQTEQI
                     INDKNVASASLEDIQTILNLKRAYQYVISHISNGEPVNISLLKRINNIVAKDDSLVPV
                     DFRTGSVGVTLLDGSRHAPNPVKEIEVARVLQNIGLQSGSTTEAAVRFMLYCMRQQVF
                     WDGNKRTATLFANGLMMAGGCGILEISEMQMPRFNEKLSAFYRTGDDTDISKFVYQNC
                     ISGIDYFGADEDI"
     gene            complement(12257..12367)
                     /locus_tag="ACFJAG_001116"
                     /pseudo
     CDS             complement(12257..12367)
                     /locus_tag="ACFJAG_001116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(12505..16899)
                     /gene="app"
                     /locus_tag="ACFJAG_001117"
     CDS             complement(12505..16899)
                     /gene="app"
                     /locus_tag="ACFJAG_001117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_168458961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesion and penetration autotransporter App"
                     /protein_id="HFC3980413.1"
                     /translation="MKTTDKRTTETHRKAPKTGRIRFSPAYLAICLSFGILPQARAGH
                     TYFGINYQYYRDFAENKGKFAVGAKDIEVYNKKGELVGKSMTKAPMIDFSVVSRNGVA
                     ALAGDQYIVSVAHNGGYNNVDFGAEGSNPDQHRFSYQIVKRNNYKAGTNGHPYGGDYH
                     MPRLHKFVTDAEPVEMTSYMDGWKYADLNKYPDRVRIGAGRQYWRSDEDEPNNRESSY
                     HIASAYSWLVGGNTFAQNGSGGGTVNLGSEKIKHSPYGFLPTGGSFGDSGSPMFIYDA
                     QKQKWLINGVLQTGNPYIGKSNGFQLVRKDWFYDEIFAGDTHSVFYEPHQNGKYFFND
                     NNNGAGKIDAKHKHYSLPYRLKTRTVQLFNVSLSETAREPVYHAAGGVNSYRPRLNNG
                     ENISFIDKGKGELILTSNINQGAGGLYFEGNFTVSPKNNETWQGAGVHISDGSTVTWK
                     VNGVANDRLSKIGKGTLLVQAKGENQGSVSVGDGKVILDQQADDQGKKQAFSEIGLVS
                     GRGTVQLNADNQFNPDKLYFGFRGGRLDLNGHSLSFHRIQNTDEGAMIVNHNQDKEST
                     VTITGNKDITTTGNNNNLDSKKEIAYNGWFGEKDATKTNGRLNLNYQPEEADRTLLLS
                     GGTNLNGNITQTNGKLFFSGRPTPHAYNHLGSGWSKMEGIPQGEIVWDNDWIDRTFKA
                     ENFHIQGGQAVVSRNVAKVEGDWHLSNHAQAVFGVAPHQSHTICTRSDWTGLTSCTEK
                     TITDDKVIASLSKTDIRGNVSLADHAHLNLTGLATLNGNLSAGGDTHYTVTRNATQNG
                     NLSLVGNAQATFNQATLNGNTSASDNASFNLSNNAVQNGSLTLSDNAKANVSHSALNG
                     NVSLADKAVFHFENSRFTGKISGGKDTALHLKDSEWTLPSGTELGNLNLDNATITLNS
                     AYRHDAAGAQTGSAADAPRRRSRRSLLSVTPPTSAESRFNTLTVNGKLNGQGTFRFMS
                     ELFGYRSGKLKLAESSEGTYTLAVNNTGNEPVSLEQLTVVEGKDNTPLSENLNFTLQN
                     EHVDAGAWRYQLIRKDGEFRLHNPVKEQELSDKLGKAGETEAALTAKQAQLAAKQQAE
                     KDNAQSLDALIAAGRDATEKAESVAEPARQAGGENAGIMQAEEEKKRVQADKDTALAK
                     QREAETRPATTAFPRARRARRDLPQPQPQPQRDLISRYANSGLSEFSATLNSVFAVQD
                     ELDRVFAEDRRNAVWTSGIRDTKHYRSQDFRAYRQQTDLRQIGMQKNLGSGRVGILFS
                     HNRTGNTFDDGIGNSARLAHGAVFGQYGIGRFDIGISAGAGFSSGSLSDGIRGKIRRR
                     VLHYGIQARYRAGFGGFGIEPHIGATRYFVQKADYRYENVNIATPGLAFNRYRAGIKA
                     DYSFKPAQHISITPYLSLSYTDAASGKVRTRVNTAVLAQDFGKTRSAEWGVNAEIKGF
                     TLSLHAAAAKGPQLEAQHSAGIKLGYRW"
     gene            17337..18683
                     /gene="mnmE"
                     /locus_tag="ACFJAG_001118"
     CDS             17337..18683
                     /gene="mnmE"
                     /locus_tag="ACFJAG_001118"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HFC3980414.1"
                     /translation="MSDNVPTIAAVATAPGRGGVGVIRISGKNLLPMAQALCGKTPEP
                     RVATYADFTDADGQAIDSGLLLFFAAPASFTGEDVIELQGHGGPVVMEMLLNRCLELG
                     ARLAEPGEFTKRAFLNDKLDLAQAEGVADLIDASGRSAARLALRSLKGDFSRRIHGLV
                     EGLITLRMLVEAALDFPEEDIDFLEAADARGKLDGLRRAVDDVLANAQQGAILREGLN
                     VVLVGAPNVGKSSLLNALAGDEVAIVTDIAGTTRDAVRERILIDGVPVHIVDTAGLRE
                     TDDVVERIGIERSRKAVSEADVALVLVDPREGLNEKTRMILDTLPSDLKRIEIHSKSD
                     LHAHAAGGFGTGAETVIALSAKTGDGLDALKRTLLCEAGWQGESEGLFLARTRHVNAL
                     KAAQEELSLAALCGNHQIELFAEHLRLAQVACGEITGEFTADDLLGVIFSRFCIGK"
BASE COUNT         4315 a         4892 c         5228 g         4575 t
ORIGIN      
        1 gcagtacaga tagtacggaa ccgattcact tggtgcttca gcaccttagg gaatcgttct
       61 ctttgagcta aggcgaggca acgccgtacc ggtttaaatt tagtccacta taaaaaacgg
      121 cggaaataaa tttttttccg cctcacttga attttcccgc acacacccta attttgccga
      181 cttgtacggg caggccgtta ggcggcagcc cggtttccac ttcaatttgt ccgaaccgtt
      241 cgggcagatg attgttttca aaccatttat cggagcataa atatgaccat ccgtccttta
      301 cacgaccgcg tcgtcgtcaa acgcttggaa gctgaagaaa aaaccgcctc tggcatcgtc
      361 ctgccgggcg cggccgccga aaaacccgat atgggcgaag tcatcgccgt gggtgcgggc
      421 aaaatcggca aagacggcgc gcgccgtccg ctggatgtca aagccggcga caaaatcatt
      481 ttcggcaaat acagcggcca aaccgtaaaa gccgacggcg aagagctgtt ggtaatgcgc
      541 gaagaagata ttttcggcat cgttgaaaaa taaatacgga cacgatgccg tctgaaacgg
      601 caaaccgcct tcagacggca taaacggttt tatcagacag ttttaagatt tttggagaat
      661 tgaaatggca gcaaaagacg tacaattcgg caatgaagtc cgccaaaaaa tggtaaacgg
      721 cgtgaatatt ttggcaaacg ccgtgcgcgt aaccttgggc cccaaaggcc gcaacgtggt
      781 ggttgaccgc gctttcggcg gcccgcacat caccaaagac ggcgtaaccg tcgccaaaga
      841 aatcgaactg aaagacaagt ttgaaaatat gggcgcgcaa atggtaaaag aagtcgcgtc
      901 caaaaccaac gacgtagccg gcgacggtac gactaccgcc accgtattgg cacaatccat
      961 cgttgccgaa ggcatgaaat acgttaccgc cggcatgaac ccgaccgatc tgaaacgcgg
     1021 catcgacaaa gccgttgccg ctttggttga agagctgaaa aacatcgcca aaccttgcga
     1081 tacttccaaa gaaatcgccc aagtcggctc gatttccgcc aactccgacg aacaagtcgg
     1141 cgcgattatc gccgaagcga tggaaaaagt cggcaaagaa ggcgtgatta ccgttgaaga
     1201 cggcaaatct ttggaaaacg agctggacgt ggttgaaggt atgcagttcg accgcggcta
     1261 cctgtcccct tactttatca acgacgcgga aaaacaaatc gccggtctgg acaatccgtt
     1321 tgttttgctg ttcgacaaaa aaatcagcaa catccgcgac ctgctgcccg tgttggaaca
     1381 agtggcgaaa gccagccgcc cgctgttgat tatcgctgaa gacgtagaag gcgaagcctt
     1441 ggcgactttg gtcgtgaaca acatccgcgg catcctgaaa accgttgccg tcaaagcccc
     1501 cggcttcggc gaccgccgca aagcgatgct gcaagacatc gccatcctga ccggcggcgt
     1561 agtgatttcc gaagaagtcg gcctgtcttt ggaaaaagcg actttggacg acttgggtca
     1621 agccaaacgc atcgaaatcg gtaaagaaaa cactaccgtc atcgacggct tcggcgacgc
     1681 agcccaaatc gaagcgcgtg ttgccgaaat ccgccaacaa atcgaaaccg cgaccagcga
     1741 ttacgacaaa gaaaaactgc aagagcgcgt tgccaaactg gcaggaggcg tggcagtgat
     1801 caaagtcggc gcggcgaccg aagtcgaaat gaaagagaaa aaagaccgcg tggaagacgc
     1861 gctgcacgct acccgcgcag ccgttgaaga aggcgtggtt gcaggcggcg gcgtagccct
     1921 gttgcgcgcc cgtgccgctt tggaaaacct gcacaccggc aatgccgacc aagacgcagg
     1981 cgtacaaatc gtattgcgcg ccgttgagtc tccgctgcgc caaatcgttg ccaacgcagg
     2041 cggcgaaccc agcgtggtgg tgaacaaagt gttggaaggc aaaggcaact acggttacaa
     2101 cgcaggctcc ggcgaatacg gcgacatgat cggaatgggc gtactcgacc ctgccaaagt
     2161 aacccgttcc gcgctgcaac acgccgcgtc tatcgccggt ctgatgctga cgaccgactg
     2221 catgattgcc gaaatccctg aagaaaaacc ggctgtgccc gatatggggg gaatgggcgg
     2281 tatgggcggc atgatgtaag caatgccgtc tgaaaccttc agacaacaag ccgcacggtc
     2341 aacgccgtgc ggtttttttg cgaataagtg cggctaaggc gcaaacctta aaattatagc
     2401 ggattaacaa aaaccggtac ggcgttgccc cgccccggct caaagggaac ggttccctaa
     2461 ggcgcccaag caccgggcga accggttccg taccatttgt actgcctgcg gctggccgcc
     2521 ttgtcctgat ttttgttaat ccgctatatt tcccgccatc ccaaaaacga agagcggcag
     2581 gaatttatcg gaaaaacagc aacctttccg ccgtcattcc cgcgaaagcg ggaatctagg
     2641 ttcgtccggt ttcggttatt tccgatagat tcctgccgcg ttgggggtct ggattcccgc
     2701 ctgcgcggga atgacgggac tttaggtttc tgtttttgtt tttctgtttt tgcgggaatg
     2761 acggggaagt tggcggttgt ttcttatgga gtggtttttg tatttggata aaaaattttt
     2821 cgttttcaag ccttcaccgc ttgccatcgg cgttaaaatt ttttacgata agcacataga
     2881 ttgtaaacaa tcggccacaa gccggtttgt tttttcagaa gacattatcc ctgtcagacg
     2941 ctgtttctat atatgtttgc ctataacggc ttgtttttaa taaataattc aagaggtatc
     3001 aacgtgtctg attccaaaac gaaagaacgt gccacattcg gcacgcgccg cgcgtttatg
     3061 attgccgcca tcgggtccgc cgtcggcttg ggcaatattt ggcgtttccc ctatattgct
     3121 tttgaaaacg gcggcggcgc attcatcctg ccctatctgg tagcgcttct gacggcgggc
     3181 atcccgctgc tgctgctcga ttatgccatc ggccaccgtt accggggttc tgcgcccttg
     3241 gctttccgcc gcctcggacg ctggttcgag ccggtcggct ggtggaacgt gatgaccaat
     3301 atcgtcatct gcatctatta cgcagtgatt atcggttggg cggcaagcta tacctattat
     3361 tcggtcaacg ccgcctgggg tgcggatccg cagggttttt tctttaagga cttcctgcaa
     3421 atggcgggcc cggaagcctt gggtttggat tttgtcggca aagtcgccgg ccctttggcg
     3481 ggcgtgtggg tttttaccgc cgccattatg gctttgggcg tgcaaaaggg cgtggcgcgc
     3541 gcctcgtcgt tctttatgcc gctgcttttg gtgatgtttt tgattatggt cggcatttcg
     3601 ctgacgctgc cgggtgcggc aaagggcttg gacgcattgt ttacgcccga ctggtcgaaa
     3661 ctcgccgatt ccaaggtctg ggtggcggca tacgggcaga ttttcttttc gctttccatc
     3721 tgcttcggca ttatggttac ctattcttct tatttgaaga aaaaaaccga cttgggcgga
     3781 acggggctgg tggtcggttt tgccaacagc agcttcgaac tgctcgcggg catcggcgtg
     3841 tttgccgcat tgggctttat ggcgcaggcg ggcggcaagg cggtcaacga ggttgcctcc
     3901 ggcggcatcg gtttggcgtt tatcgccttt ccgaccatta tcaaccaggc gccgatgggc
     3961 tggctgatcg gcatattgtt tttcggttcg ctggtgttcg ccggcgttac gtcgatgatt
     4021 tccatccttg aagtgattgt ggcggcgatt caggacaagc tgaacatcgg gcgcgtcaac
     4081 gccacgctgc tggtctgcat tccgatgggc attgtttcca cgctgctgtt cggtacggcg
     4141 acggggctgc ctgttttgga cgtgatggac aaattcgtca acacctacgg cattgttgcc
     4201 gccggctttg tttatgttgc cgccatcatc atcggcggca ggttgccgga attacgcagg
     4261 cacctgaacg ccttgtcctc catccgcgtc ggcggcttgt ggacggcctg cgtcgtgttt
     4321 accgtcgtga tgctcggcta tatgctgtat caggacaccg ccggattgtt ggaaaaaaac
     4381 tacggcgatt atccggatgg tttcctcaat attttcggct gggggatgtc ggcggcgtta
     4441 atcatgttcg ggctgctgct gtcgctgctg ccttggaaac acggtcagga ttttaatgtc
     4501 aaagacgaac acgaacatga acaaggagga gaaaaatgag tacttccgcc attgtgatga
     4561 tggttgccgc catcgcggtg atttggggcg ggctgctgct ttccctgtta aggctgccgg
     4621 aagagtaagc ctttagaacg ttaaaaatgc cgtctgaacc gcttcagacg gcatttgttt
     4681 tacggctgcc attcgcgttc caccttgccc gacgcatcca aagtttgcgc tcggacgata
     4741 tgcccgtccc ggtacaggat gcgcgtccgc aatatgccct gttcggtata gccttgcgcc
     4801 acgccgtttt caaccggcgt gtgcgaatgc agtttgccgt ttggatggta aatatcgaca
     4861 aagcggtcga acacgccgtt tttgacgatg cttttcaaga cgcgcccgtt tgaggcgcgg
     4921 gtgctgaatg cgccgtccgg cgtgcctgaa ggcggccggc tgtatgggtt ggcgggttgg
     4981 atgggcgcgc ttttcggcag ggtgcgaagc ggcggccggt cagagggaag ggcggtgcag
     5041 cccgccgaaa gtagggcggc ggacgaagcg gtaagcagga ggataatcgg agcgtgcttc
     5101 atttcaattc cttagatatt gcaccccata aaaggggcgc gtaatttttt tcaacaattc
     5161 ccttcgtcag tcgggcgaga cggggatttg ttgcgtcgtc atttgaaaac aggctgtgtt
     5221 tgaatattcc gccaagatgt cactttaaac ggacaatgcc gtctgaaggc ttcagacggc
     5281 attttgatgt tcggcttata ggcaggcgag ttcgtttgcc atttgctgtt ccaaggtttc
     5341 gcgccggcgg atgagtttgt atccgccgcc gtcaaccaac acctccgccg cacggttgcg
     5401 cgtgttgtaa ttgctagcca tactggcccc gtatgcgccc gcgctgcgga taagcagcaa
     5461 atcgccttct tcgcaggcga tggtgcggtc tttgccgagg aagtcgccgg tttcacaaat
     5521 cgggccgacg atgttggcgg tcagaggctc aatgtttttg gtttcaaccg cttcgatgtg
     5581 gtggtaggca tcgtataggg ctgggcgcat caaatcgttc atcgccgcat cgaccatcac
     5641 aaagtttttc tcttcaccgt gtttgacaaa ttcgacgcgc gtcagcaatg cacctgcgtt
     5701 gccgaccaag ctgcggcctg gctcaagaat gagtttcaga cggcgtgtcc ccatcagttt
     5761 ttgaaccgct cgggcatacg cacccaaatc ggggacgcct tcgtctttgt aaacaatgcc
     5821 gacgccgccg cctaagtcca aatgttccaa aacaatgcct tcggcggcaa gagcgtcaac
     5881 caaaatcaaa atgcgttcgc aggcttcgac cagtgggctt aagtcggtca gttgcgaacc
     5941 gatgtggcag tcgatgccga tgattttcaa attgggctgt tgtgcggcat ggcggtaggc
     6001 ttcgagcgcg tcggcgtagg cgatgccgaa tttgttggct ttcagacctg tggagatgta
     6061 gggatgggtt tttgcatcga catcgggatt gacgcgcagg gagacgggcg cggttttgcc
     6121 caaacgcgcg gcaattttct gaatgcggtc gatttcgggg atgctttcca tattgaagca
     6181 ttttacgccg gcattcagcg cgaactcgat ttccgcctcg cttttgccta cgccggaaaa
     6241 aatcgttttc gccgcatcgc cgcctgccgc caaaacgcgt gccaattcgc cgcccgacac
     6301 aatgtcaaaa ccgctgccaa aagaagcaaa gtgtttgata atgctcaggt tgccgtttgc
     6361 cttgacggcg tagcagacaa gcgggttcaa agcggcaaag gcggtttgat agttttcaaa
     6421 tgctccggtc agcgcggatt ggctgtacac ataaagcggc gtgccgaatt cttcggcaag
     6481 gcgggggtag gggacttgtt cgcaaaacag ggtcatattt tcgttttcat ttttgggttg
     6541 gtggggcgga ttgcggtttg ccttgaagct gcaaaccggt ttggatcacg ccgaaacgcg
     6601 ccgtatcgcc ttctttgggc aggtagaggc cgcctttgta accgcaggcg gaaagcagga
     6661 gggcggttgc cgccgcaaaa aatacgccgt atttcatcgg taaacttcct tcataagcgc
     6721 gaatgtggca agattcggca tcttaaacaa aaaacatgca aaaagctatg atgaccgaaa
     6781 gcgagtttat ccgcgcgagc gaagcattat ttgaacacat cgaagaccaa atcgacgaaa
     6841 acggctggga tttcgactgc cggtttgccg gaaacgtcct gaccatcgaa gccggagacg
     6901 gcacgcaaat catcgtcaac cgccacacgc ccaaccaaga attgtggatt gccgcaaaaa
     6961 gcggcggcta ccatttcgcc gaacaaaacg gcaaatggct ggcaacgcgc gacagccgcg
     7021 atttttacga cgttttaaac gaagccctga gcgcggcttc gggcgaagcg gttgagattg
     7081 ccgaattgtg attcaatttt cgatataaaa agattgttac ccaatggcac aattacctct
     7141 atatcggact gccgaaatcg gaaattttac tgtcggcacg cctaaagttt tagaatcatt
     7201 ttccaaacat atcccttatg gtgttgtctt tgaagatgat ggcaacacgg gctacttcta
     7261 tgccgcttcg caagagggga ttttggatgc cttgcacatc tacaatgtcg aagatgtatc
     7321 cgacaaacat atccccaatc atgtcttgat tttatgggat ggcgcctgca ccatagccgc
     7381 attgtgtatc aacgactaca tccatgccgt ctatgatttt gtcgaacagg caggatattg
     7441 ccgcaacggc ttccctgaag caggcggcga atgggtaaaa gtcgaaaacc gcgtcttgga
     7501 cgatgaattg ctggacaaaa tcctatcccg aaaacctaca taacccgcac aaaaggatac
     7561 ccaaatgccc ctgttagaca gtttcaaagt cgatcacacc cgtatgcacg cccctgccgt
     7621 acgcgtggcg aaaaccatga ccacgcccaa aggcgacacc attactgtat tcgacctgcg
     7681 cttttgcatc cccaataaag aaatcctgcc cgaaaaaggc atccacacgc tggagcattt
     7741 gtttgccggc tttatgcgcg accacttgaa cggcgccggc gtggaaatca tcgacatttc
     7801 cccgatgggc tgccgcaccg gtttttatat gagccttatc ggcacgcctt ccgaacagca
     7861 ggttgccgat gcgtggttgg cttcgatgca ggatgttttg aatgtcaaag accaaagtaa
     7921 aatccccgag ttgaacgaat accaatgcgg cacttatctg atgcactcgc tcgccgaagc
     7981 gcaacaaatc gcgcaaaacg tgttggcgcg caaagtggcg gttaaccgaa acggcgattt
     8041 ggctttggat gaaagcctgc tgaacgctta atccgccgca aatgctgtct gaacaagggt
     8101 ttcagacggc atttgccttt tccgttataa tccggggttg tacgggggcg ggttttaagc
     8161 cggcatcgtc cttccctatt ttttctgtcc cttatcggtt tcaagcgggt tttttatgtc
     8221 caacagacct acactcctcc tcgttgacgg ctcttcctat ctctaccgcg cgtatcacgc
     8281 gatggggcaa aacctgactg cgcctgacgg tgcgccgacg ggtgcgctgt atggcgtatt
     8341 gaatatgttg cgccgtttgc ggtcggaata tccgcacgat tattgcgcgg tggtttttga
     8401 tgcgaaaggc aaaaatttcc gccatcaaat gtttgaagaa tacaaggcga cgcgcccgcc
     8461 gatgccggac gatttgcgcc cgcaggcgga agccctgccg gatttggtgc gcctgacggg
     8521 ctggccggta ttggtgattg ggcaagtgga ggcggacgat gtgatcggca cgctggcgaa
     8581 acagggggcg gaacatggtt tgcgagtcat tgtttcgacg ggcgataagg atatggcgca
     8641 gttggtggat gagcgcgtta cgctggtgaa cacgatgagc ggagaaacgc tggatattga
     8701 aggcgtgaag gcaaaattcg gcgttcgccc cgaccaaatc cgcgattatc tcgcgctgat
     8761 cggcgacaag gtggacaacg taccgggcgt ggaaaaatgc ggcccgaaaa cggcggtgaa
     8821 atggctggaa gcctacggtt cgttgcaagg cgtgatggaa cacgctccgg aaatcaaagg
     8881 caaggtcggc gaaaacctgc aagccgcgct gccccaactg ccgctgtcgt atgatttggt
     8941 cacgattaaa accgatgtgg acttgcacac cgagctttca gacggcatcg aaagcctgcg
     9001 ccgtaccgcg ccgaaatggg cgcagcttgc ggttgatttc aaacgctggg gcttccgtac
     9061 ttggctgaaa gaagcggaat caaacatgaa taccggctcg accgatgatt tgttcggtag
     9121 cgacagcatc ggcgagcagg cggctttgaa tgcggaaata ccgtctgaaa aacgagctga
     9181 aaaagccacc gcccctgaaa aactggatta tcaagccgtt accaccgaag ctcagtttgc
     9241 cgccttgttg gacaaactag cgaaggcgga cacaatcggc attgatacgg aaaccacgtc
     9301 attagatgcg atgaatgccg agctggtcgg catcagcatt gcgttccaag caggcgaagc
     9361 ggtttacatc cccgtaggcc acagcctgac tgccgcgccc gaacagcttg atttgcaaga
     9421 cgtattaggc cgtctgaagc cgcatttgga aaaccccgcc ctgaaaaaaa tcggtcaaaa
     9481 cctcaaatac gaccaacacg ttttcgccaa ctacggcatc gcgttaaaca acattgccgg
     9541 cgacgcgatg ctcgcttcct acatcatcga gagccatctc ggacacggct tggacgaatt
     9601 gtccggacgc tggctcggtt tagaaaccat tacctacgaa tcgctgtgcg gcaaaggcgc
     9661 gaagcaaatc agttttgccg atgtcgccat cgggcaggcg accgaatacg ccgcccaaga
     9721 tgccgatttc gccctgcgcc tcgaagcgcg cctgcgcgcg caaatggacg acaaacaact
     9781 tgaaatgtat gaaaaaatgg agcttcccgt cgcgcaggta ttgtttgaaa tggaatgcaa
     9841 cggcgtgcaa atcgaccgcg ccgaactcgc ccgccaaagc gcggaactcg gcgcggagct
     9901 gatgaagctc gaacaggaag cctacgccgc tgcaggtcaa ccgtttaacc tcaactcgcc
     9961 caaacagctg caagaaatcc tgttcgacaa aatgggcatc ccgacaaaag ggctgaaaaa
    10021 aaccgccaaa ggcggcattt ccaccaacga agccgtgctc gaacagctcg cgcccgacta
    10081 ccccctgccc aaaatcatcc tgcaaaaccg cagcctggcg aaactcaaat ccacctacac
    10141 cgacaaactg cccgaaatga tttcgccccg ggataaccgc gtgcatacca cctatgccca
    10201 agccgtcgcc attaccggcc gcctcgccag caacaacccc aacctgcaaa acatccccat
    10261 tcgcaccgcc gaaggccgcc gcgtgcgccg cgccttcact gcaccgccgg gcagcgtcat
    10321 cgtttccgcc gactattccc aaatcgagct gcgcattatg gcgcacctct ccggtgacaa
    10381 aaccctcatt gccgcatttc aaagcggcga agacgtacac cgccgcaccg ccgccgaagt
    10441 gttcggcact gcgcccgaaa acgtctcgcc cgagcaacgc cgctacgcca aaaccatcaa
    10501 cttcggctta atctacggta tggggcaata cggtttggca aaatcattgg gcatcgacaa
    10561 cctttccgcc aaaaacttta tcgaccgcta cttcgcccgt tatcccggcg tcgccgaata
    10621 catgcagcgc accaaagaac aagccgccgc ccaaggctac gtcgaaaccc tgttcggcag
    10681 aaggctctat ttgcccgaca tccgcaacaa aaacgccaac gcccgcgcag gagccgagcg
    10741 tgccgccatc aacgccccca tgcaaggcac cgcttccgac ctcatcaaac gcgccatgat
    10801 aaacgtgcga aactggcttt cagacggcat cggcagcaaa ctggtcatgc aggtgcatga
    10861 cgaactggtg ctggaagtcg ttgaaaccga actggatttt gtcaaagaaa aactgccgca
    10921 gattatggcg aaagtggacg gcggattatt ggatgtaccg ctggtggctg aggttggcgt
    10981 aggggagaat tgggaagagg cacattgaga atgcacaagt attgaactgt tacgttttga
    11041 tttatcaaaa tttaaggaag taaaataccc gattcgaatg attggaaatc aatagcaagc
    11101 cgtaggtcgg atacttgtat ccgacaaaag cctgccatct caaatagcag tcggattcga
    11161 gaatccgacc tgccaaaccg ggcgcggacg ctccggtcgg cagttagcgc acaaatcgaa
    11221 cagaacatca caaaaaagcc tgattcggat tttccaatcg ggcttttttg cgcccgtttt
    11281 gtcatcccgt gaaatatccg cataacaaaa ataatgcaaa atcatgacaa aaccggcgcg
    11341 aggttacaca aacggatgaa atcaaccgat attcaaacac agccattttt agcgcatttt
    11401 cagcgtatct ttatgcggaa aatttcgtga acaggttttt tgcacaggct tccgccgcgt
    11461 ttcgcgggat gggaaaccgt attagaaaac ggacgcacgc aacataaacc ccgaaagtga
    11521 tgataagatg atgatttaac gtactgcttt aattatttaa ggaattatcg tgtttcccga
    11581 caaatacaag ttgagtttgg aagaaaatat ttttctggca aagaaagtat tggttgctca
    11641 aattcacaac ctcagccgtt ttgagaattg tcagacgacc ttgttgcaga ccgagcaaat
    11701 tatcaatgac aaaaatgtag cctccgcgtc actggaagac atccaaacca tcttgaacct
    11761 gaaacgtgcc tatcaatatg tgatttcgca tatttcaaac ggcgaaccgg tcaatatttc
    11821 actccttaaa agaatcaaca acattgttgc caaggacgat tctttggtac ccgtggattt
    11881 ccgtaccggt tcggtcggcg taacgctatt ggacggttcc cgtcatgccc cgaatccggt
    11941 gaaggaaatt gaagtggccc gcgtgttgca aaatatcgga ctgcaaagcg gttcgacgac
    12001 ggaagcagcc gttcgtttca tgctctattg tatgcggcag caggtttttt gggacggcaa
    12061 caaacggacg gcaaccctat ttgccaacgg cctgatgatg gcggggggct gcggtatcct
    12121 ggaaatctcc gaaatgcaga tgccgcgatt caatgaaaaa ctatccgcat tctatcgcac
    12181 cggcgacgat accgatattt ccaagtttgt gtatcaaaat tgtatatcgg gcatagacta
    12241 tttcggcgcg gacgaagata tatagtggat taaatttaaa ccggtacggc gttgcctcgc
    12301 cttgccgtac tatttgtact gtctgcggct tcgccgcctt gtcctgattt aaatttaatc
    12361 cactatagat ttccccgact cgccgaacat gggctaaaaa tcaatttgac ggttatcaga
    12421 cgatggagta ggcacaaggt ggcagaaaaa ggggtttgac agtgcacggc ggcatcgtca
    12481 aacccctttc ggcatatccg gcggttacca gcggtagcct aatttgatgc ccgcgctgtg
    12541 ctgcgcttcc aattgcggcc ccttggcggc ggcagcgtgg agggacagcg tgaaaccttt
    12601 gatttcggcg tttacgcccc attccgcact gcgggttttg ccgaaatcct gcgccaatac
    12661 ggcggtattg acgcgcgttc ggactttgcc ggaagcggca tcggtatagg acaggctcaa
    12721 ataaggcgtg atggaaatgt gttgcgccgg tttgaatgaa taatctgcct taatgcccgc
    12781 gcggtagcgg ttgaatgcaa ggcccggggt ggcgatattg acgttttcgt atcggtaatc
    12841 cgctttttgg acgaaatagc gcgttgcgcc gatgtgcggt tcgatgccga atccgccgaa
    12901 acctgcgcgg tatcttgcct gaatgccgta atgcagcacg cggcggcgga ttttgcctct
    12961 gatgccgtct gaaaggctgc cgctactaaa acccgcgccc gcgctgatgc cgatgtcgaa
    13021 cctgccgatg ccgtattgcc cgaaaacggc accgtgggca agccgtgccg agttgccgat
    13081 gccgtcgtcg aaggtgtttc cggtccggtt gtgcgaaaac aggatgccga cgcgcccgct
    13141 gccgaggttt ttctgcatac cgatttggcg caggtcggtt tgttggcggt aggcgcggaa
    13201 atcttgcgaa cggtagtgtt tggtgtcccg gatgccgctt gtccaaacgg cgttgcggcg
    13261 gtcttcggca aacacgcggt ccaattcgtc ctgtacggcg aaaacgctgt tgagcgtggc
    13321 ggaaaattca ctcaaaccgc tattggcata acggctgatc aggtcgcgct gcggttgggg
    13381 ttgcggttgc ggcaaatccc ggcgggcgcg gcgggcgcgg gggaaggcgg tggtagccgg
    13441 ccgggtttcc gcttcgcgct gtttcgccaa ggcggtgtct ttatccgcct gcacccgttt
    13501 tttctcttcc tccgcctgca taatgccggc attttccccg cctgcctgcc gggccggttc
    13561 ggcaacgctt tctgcctttt cggtggcatc gcgcccggcc gcaatcagcg cgtcaaggct
    13621 ttgcgcgttg tctttttccg cctgttgttt ggcggcaagt tgtgcctgtt ttgccgtcaa
    13681 ggcggcctct gtttctcccg ccttgccgag tttgtcggaa agctcttgtt ctttgaccgg
    13741 attatgcagg cggaactcgc cgtctttgcg gataagctga taacgccatg cgccggcatc
    13801 gacgtgttcg ttttgcaggg tgaaattaag attttcggac agcggtgtgt tgtcttttcc
    13861 ttccactacc gtcaattgct cgagacttac gggttcgttg ccggtattgt tgacagccaa
    13921 ggtgtaagtg ccttcggaac tttccgccag cttcaatttg ccgctgcggt agccgaagag
    13981 ttccgacata aagcggaatg ttccctgacc gttcaatttg ccgtttaccg tcagcgtgtt
    14041 gaaacgggat tctgccgaag ttggcggcgt aacggataat agggaacggc gcgaacggcg
    14101 gcgcggcgca tctgccgcac tgccggtttg cgcgcctgcc gcatcgtgtc gataggcgga
    14161 attgagtgta atggtggcgt tgtcaaggtt taaattgcct aattccgtgc ccgacggcag
    14221 cgtccattcg ctgtctttta agtgtaatgc cgtatccttg ccgccgctga tttttccggt
    14281 aaagcggctg ttttcaaaat ggaatactgc cttatcggct agggagacat tgccgttgag
    14341 tgcggaatgg cttacgtttg ccttagcgtt gtcggaaagc gtcagactgc cgttttgtac
    14401 ggcgttgttg cttagattaa atgaagcatt gtccgaagcc gatgtgttgc cgtttaatgt
    14461 ggcttgatta aatgttgctt gggcattgcc cacgaggctg aggttgccgt tttgggtggc
    14521 gttgcgcgta accgtatagt gcgtgtctcc gcctgcacta agattgccgt tgagtgtggc
    14581 aagtcctgtg agatttaaat gagcgtgatc ggcaaggctg acattgcctc tgatgtcggt
    14641 cttgctcaat gaagcaatca ctttatcgtc ggtaatggtt ttttcggtac aacttgtcag
    14701 acccgtccag tccgaacgtg tacagattgt gtggctttga tgcggtgcga caccgaaaac
    14761 tgcttgggcg tgattgctta aatgccaatc gccttccact ttggcaacat tgcgggaaac
    14821 caccgcttgt ccgccctgaa tatggaagtt ttccgcttta aatgtgcggt cgatccaatc
    14881 gttgtcccac acgatttctc cttgtgggat accttccatt tttgaccacc cgcttcctaa
    14941 atgattgtag gcgtgcggtg tcggtctgcc gctgaaaaac agtttgccgt ttgtttgcgt
    15001 gatattgccg tttaaatttg ttccgccgga aagcagtaaa gtgcgatccg cttcttccgg
    15061 ttggtaattc agattgagcc gcccgttcgt tttggttgca tctttctcgc caaaccaacc
    15121 gttgtaggca atttcttttt tgctatccaa gttgttgtta ttgccggttg tagtaatatc
    15181 tttattgcct gtaatggtaa cggtggattc tttgtcttga ttgtggttga caatcatcgc
    15241 cccttcatcg gtattttgaa tgcggtggaa cgaaagcgaa tgcccgttca aatccaaacg
    15301 tccgccgcga aagccgaaat agagtttgtc ggggttgaac tgattatcgg cattcagttg
    15361 caccgtcccc ctgccgctga ccaagccgat ttcactaaag gcttgttttt tgccttgatc
    15421 gtccgcctgc tgatctaaga tgactttacc gtcgcccacg ctgaccgagc cttggttttc
    15481 ccctttggct tgaaccagca gcgtgccttt gccgattttg gacaggcggt cgtttgccac
    15541 gccgtttact ttccaagtaa cggtactgcc atcactgata tgaacgcccg cgccttgcca
    15601 cgtttcgttg tttttaggcg agaccgtaaa attaccctca aaatacaaac cgcccgcgcc
    15661 ttggttgatg ttgctggtaa gtatcaattc accttttcct ttgtcaataa aggaaatatt
    15721 ttctccatta ttcagtctgg gtcgataact gttgacccca cctgcagcat gataaacagg
    15781 ttctcttgct gtctcggata aagaaacatt aaacaattga acggttcgtg tttttaatct
    15841 ataaggtaga gaatagtgtt tatgtttggc atcgattttt cctgcgccat tattattgtc
    15901 gttaaaaaag tatttcccat tttgatgtgg ttcgtagaat actgaatggg tatctccagc
    15961 aaagatttca tcatagaacc aatctttacg aactagctgg aagccattgc tttttcctat
    16021 ataggggttg cctgtttgca ataccccatt aattaaccac ttttgctttt gggcatcata
    16081 gataaacatt ggtgagccac tgtcgccaaa tgagcctcct gttggtaaaa aaccatatgg
    16141 gctatgttta attttttcgc tacctaagtt gactgtgcca ccacctgatc cattttgtgc
    16201 aaaggtattg ccaccgacga gccaagaata tgcgcttgca atatgatatg aactttcgcg
    16261 gttattgggt tcgtcttcat cagaccgcca atattgtctg cctgctccga ttcgaacacg
    16321 atcagggtat ttatttaaat cagcgtattt ccacccatcc atataactgg tcatctcaac
    16381 aggttctgca tctgtgacaa atttgtgcaa acgcggcata tgataatcgc cgccataagg
    16441 atggccgtta gtccctgctt tataattatt tcttttcaca atttggtaag aaaagcggtg
    16501 ctgatcggga ttgcttccct ccgcaccaaa atcaacattg ttatagccgc cgttatgtgc
    16561 cacgctcaca atatattgat cgcccgccaa tgccgccacg ccgttacgcg ataccacaga
    16621 aaaatcaatc atcggggctt tcgtcatcga tttgccgacc aactcccctt ttttgttgta
    16681 aacctcaata tctttcgccc cgactgcaaa cttgccttta ttttcggcaa agtcgcgata
    16741 gtattggtag ttgatgccga aataagtgtg tcccgcccgg gcttggggca gaatgccgaa
    16801 cgacaggcat atggctaagt aagcgggcga gaagcggatg cggccggttt taggggcttt
    16861 gcggtgtgtt tcggttgtcc gtttgtcggt tgttttcatt atttttcctt atctgacggg
    16921 attcggtttg tttgggaggg cgcggcttcc gcttccgggc ggcgcgcggg atgtggctat
    16981 atgtgcggtt cggcgtattt tgccgcttct gttcggagat ggtgcaggga agggcgggaa
    17041 ggaaaaaaag gggattttta tcaactcgcc ggagcaatcg atgggttgca cataaaggca
    17101 tcattttgaa tacgaaatca tatcacactt tactttatcc ccgttccttt tcggtcggaa
    17161 ccccgccgtt ttcggcggta aaaaccgacc ggaggcggaa tgcggggcag ggttttgtgc
    17221 cgtgcggtgt cggaatatcg ttttacacaa gccggcaatg ccatctgaaa gccgaaccgt
    17281 cggacttcag acggcatttg ctataatcgc ggctgttttg aattttcggg ggttttatgt
    17341 cggataacgt tccaacgatt gcggcagtcg cgaccgcgcc cggacgcggc ggcgtgggcg
    17401 tgatacgcat atcggggaaa aacctgttgc cgatggcgca ggctttgtgt gggaaaacgc
    17461 ccgagccgcg cgtggcaacc tatgctgatt ttacggacgc ggacggacag gcaatcgata
    17521 gcgggctgct actgtttttt gccgcgccgg caagttttac gggcgaagat gtcatcgagc
    17581 ttcagggaca cggcgggccg gtagtgatgg agatgctgct gaaccgctgt ttggaactgg
    17641 gcgcgcgcct tgccgagccg ggcgagttta ccaaacgtgc gtttttaaac gacaaactgg
    17701 acttggcaca ggcggaaggc gtggcggatt tgattgacgc atccggccgt tcggcggcgc
    17761 gtctggcgtt gcgctcgctc aagggcgatt tttcgcggcg gatacacggt ttggtcgaag
    17821 gcttgattac cttgcggatg ctggtcgaag cggcgctgga ttttcccgag gaagacatcg
    17881 attttctcga agcggcggac gcacgcggca aactggacgg cttgcgccgc gccgtggatg
    17941 atgtgcttgc caacgcgcag cagggcgcga ttttacgcga aggtctgaat gtcgtattgg
    18001 tcggtgcgcc gaatgtcggc aagtccagcc tgttgaacgc gctggcgggc gacgaagtgg
    18061 cgattgttac cgatattgcc ggaacgacgc gcgacgcggt cagggaacgt atcctgattg
    18121 acggcgtgcc ggtgcatatt gtcgatacgg caggtttgcg cgagacggac gacgtggtcg
    18181 aacgcatcgg catcgaacgc agccgcaaag ccgtatccga agccgatgtc gcgctggtgt
    18241 tggtcgatcc gcgcgagggt ttgaatgaaa agacgcggat gattttggat acgttgccgt
    18301 cggatttgaa acgcattgaa atccacagca aatccgattt gcacgcacac gcggcaggcg
    18361 ggttcggtac gggcgcggaa accgtcatcg cgctgtcggc gaaaaccggc gacggcttgg
    18421 acgcgctgaa acggacgctg ttgtgcgagg ccggttggca gggcgaaagc gaagggctgt
    18481 ttttggcgcg gacgcggcac gtcaacgcac tcaaggcggc gcaggaagaa ttgtcgctgg
    18541 ccgctttgtg cggcaaccat caaatcgagc tgtttgccga acacttgcgg ctggctcagg
    18601 tcgcgtgcgg cgaaattacg ggggaattta cggcggacga cctgctcggc gtgatttttt
    18661 cgaggttttg catcggaaaa taagcgggcc ggaggcattg tggcggtgtc cggctgaaca
    18721 ttccgttatc ccataaaaac gggaatccga tccgttcggt tttggttttt tgaatttcgg
    18781 gcaacgctta aatcttcatt ccgcgcaggc ggaaattatc ggcgcggtac ggcaactttt
    18841 ttcaatactg aaagccccgt cattcctgta aaaacaaaaa aatcaaaaac agaaaactga
    18901 aatatcgtca ttcccgcgca ggcgggaatc cagccccgtc ggcacggaaa cttatcggga
    18961 aaacggtttc ttcagatttt acgttccgga ttcccgcttt cgcgggaatg
//
LOCUS       DAXFZM010000039        18580 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.039, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000039 DAXFZM010000000
VERSION     DAXFZM010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 18580)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18580)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18580
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.039"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(223..1440)
                     /locus_tag="ACFJAG_001119"
     CDS             complement(223..1440)
                     /locus_tag="ACFJAG_001119"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004072 - aspartate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HFC3980415.1"
                     /translation="MALIVHKYGGTSVGSPERIKNVAKRVAKARAEGHDIVVVVSAMS
                     GETNRLVALAHEMQEHPDPRELDVVLATGEQVTIGLLAMALKDIGVDAKSYTGWQVSL
                     KTDTAHTKARIESIDDEKMRADLAAGKVVIVAGFQGISSEGNISTLGRGGSDTSAVAL
                     AAALKADECQIYTDVDGVYTTDPRVVPEARRMDTVTFEEMIELASLGSKVLQIRSVEF
                     AGKYKVRLRVLSSLQDGGNGTLITFEEDDNMERAAVTGIAFDKNQARINVRGVPDKPG
                     VAYQILGAVADANIEVDMIIQNVGSEGTTDFSFTVPRGDYKQTLEILSERKDSIGAAS
                     IDGDDTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQMISTSEIKVSVLIDEKYME
                     LATRVLHKAFDLG"
     gene            complement(1642..2370)
                     /gene="rph"
                     /locus_tag="ACFJAG_001120"
     CDS             complement(1642..2370)
                     /gene="rph"
                     /locus_tag="ACFJAG_001120"
                     /EC_number="2.7.7.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0009022 - tRNA nucleotidyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HFC3980416.1"
                     /translation="MPDYIRTSRAADSLRDIKITPHFLPHTDGSCLIECGNTKVICTA
                     SVDENAPPFLHGKNQGWVTAEYGMLPASTALRMRREASAGKQSGRTQEIQRLIGRSLR
                     AVVDMEKLGERQILIDCDVIQADGGTRTASITGAFVALQIAVGKLVSDGILSENPILE
                     AVAAVSAGVVNGVPLLDLDYPEDSGCDSDVNIVMTASGKIIEIQGTAEGAPFSLDELG
                     KLVALAQKGIGELLRYQQNALSVA"
     gene            complement(2452..2916)
                     /locus_tag="ACFJAG_001121"
     CDS             complement(2452..2916)
                     /locus_tag="ACFJAG_001121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HFC3980417.1"
                     /translation="MYKHLVVAVDGSETSINALKHAAELAGVNGARLTLVHVANPAEY
                     MALAPEFLQHESYEAAAVAQGNEVLDAAERTARELGVGNTVKHLLVANKGAREMAQDL
                     VDYADENGAGLLVLGTHGRTGLMHLLMGSFAETVMRQSHLPLLIIRSKAEEA"
     gene            3134..3910
                     /locus_tag="ACFJAG_001122"
     CDS             3134..3910
                     /locus_tag="ACFJAG_001122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ThiF family adenylyltransferase"
                     /protein_id="HFC3980418.1"
                     /translation="MSDNALTSSRRFGGIARLYGDSALTHFSQAHVCVVGVGGVGSWA
                     VEALARTGIGRLTLIDLDNVAESNVNRQLHALTGDFGKAKVTALRERITQINPQCEVF
                     EIEDFVTEDNLPEYFGKGFDFVIDAIDQVRVKAAMAAYFVERKQPFVLSGGAGGQKNP
                     ALIQTADLSRVTHDPLLANLRYTLRKRYGFSRDTKEKMRVPCVYSTENIMPPQSGAAC
                     SADAAPQGLSCAGYGASMLVTASFGLYCAQAAVEHIAGKK"
     gene            3914..4045
                     /locus_tag="ACFJAG_001123"
     CDS             3914..4045
                     /locus_tag="ACFJAG_001123"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980419.1"
                     /translation="MPSETGFRRHLNKRGNQAVGSEKPTSARLKPYSQSTPFQNICI"
     gene            4155..5009
                     /locus_tag="ACFJAG_001124"
     CDS             4155..5009
                     /locus_tag="ACFJAG_001124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ScpA family protein"
                     /protein_id="HFC3980420.1"
                     /translation="MPPIPALSAPSEHTVAWVFGQPVTDLPQDLFIPPDALKVVLGSF
                     QGPLDLLLYLIRKQNIDVLDIPMVEITGQYLHYIAQMEAYQFDLAAEYLLMAAMLIEI
                     KSRLLLPRTEAVEDEEADPRAELVRRLLAYEQMKLAAQGLDALPRAGRDFAWAYLPLE
                     IAAETKLPEVYIADLMQAWLGILSRAKHTRSHEVIQETLSVRAQMTAILRRLNEHGIC
                     RFHDLFNPEQGAAYVIVNFIALLELAKEGLVGIVQEDGFGEIRISLNHEGAHSDGIFG
                     TRGGRDVF"
     gene            5050..6258
                     /gene="pncB"
                     /locus_tag="ACFJAG_001125"
     CDS             5050..6258
                     /gene="pncB"
                     /locus_tag="ACFJAG_001125"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004516 - nicotinate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HFC3980421.1"
                     /translation="MTGIIHSLLDTDLYKFTMLQVVLHQFPQTHSLYEFRCRNVSTVY
                     PLADIREDLEAELDALCRLRFTHDELGYLRSLRFIKSDFVDYLELFQLQRRFVEVGTD
                     DKGRLNIRIEGPMIQAMFFEIFILAIVNELYFRRLETPAVIEEGERRLQAKAARLKEI
                     AAAQNPDEPPFLISDFGTRRRYKLAWQEHVIRTLLEAAPSIVRGTSNVYLAKKLGITP
                     IGTMAHEFLQAFQALDVRLRNFQKAALESWVHEYRGDLGVALTDVVGMDAFLRDFDLY
                     FAKLFDGLRHDSGDPYVWGDKAYAHYQKLKIDSRTKMLTFSDGLDIKRSWALHQYFKG
                     RFKTGFGIGTNLTNDMGHTPLNIVLKLVECNGQSVAKLSDSPGKTMTNNSTFLAYLRQ
                     VFGIPEPRTP"
     gene            6350..8068
                     /gene="argS"
                     /locus_tag="ACFJAG_001126"
     CDS             6350..8068
                     /gene="argS"
                     /locus_tag="ACFJAG_001126"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004814 - arginine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006420 - arginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HFC3980422.1"
                     /translation="MNLHQTVEHEAAAAFAAAGIAGSPVVLQPTKNAEHGDFQINGVM
                     GAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINLRLRHEFLAQNIHAALNDA
                     RFGVAKTAQPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSISRVLEFTGNTVIRQNHVG
                     DWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDPAFADTAREYVVKLQG
                     GDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKYNDDLQPVADDLVQKGL
                     AVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACLRYRIGRLKAGRLLY
                     VVDHRQALHFEQLFTTSRKAGYLPENAKAEFIGFGTMMGKDGKPFKTRSGDTVKLVDL
                     LTEAVERATALVKEKNPELGADEAAKIGKTVGIGAVKYADLSKNRTSDYVFDWDAMLS
                     FEGNTAPYLQYAYTRVQSVFRKAGEWDATAPTVLTEPLEKQLAAELLKFENVLQSVAD
                     TAYPHYLAAYLYQAATLFSRFYEACPILKAEGASRNSRLQLAKLTGNTLKQGLDLLGI
                     DVLDVM"
     gene            complement(8004..8389)
                     /locus_tag="ACFJAG_001127"
                     /pseudo
     CDS             complement(8004..8389)
                     /locus_tag="ACFJAG_001127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257775.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            8588..10006
                     /locus_tag="ACFJAG_001128"
     CDS             8588..10006
                     /locus_tag="ACFJAG_001128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HFC3980423.1"
                     /translation="MNIHALLSKQWTLPPFLPKRLLLSLLILLVPNAVFWVLALLTAT
                     ARPIVNLDYLPAALLIALPWRFVKIAGVLAFWLAVLFDGLMMVIQLFPFMDLIGAINL
                     VPFILTAPAPYQIMTGLLLLYMLAMPFVLQKAAVKTDFRHIAVCAAVVAAAGYFTGHL
                     SYYDRGRMANIFGANNFYYAKSQAMLYTVSQNADFITAGLVDPVFLPLGNQQRAATRL
                     SEPKSQKILFIVAESWGLPGNPELQNATFAKLLAQKDRFSVWESGSFPFIGATVEGEM
                     RELCAYGGLRGFALRRAPDEKFARCLPNRLKQEGYATFAMHGAGSSLYDRFSWYPRAG
                     FQKIKTAENLIGKKTCAIFGGVCDSELFGEVSAFFKKHDKGLFYWMTLTSHADYPESD
                     IFNHRLKCTEYGLPAETDLCRNFSLHTQFFDQLADLIRRPEMKGTEVIIVGDHPPPVG
                     NLNETFRYLKQGHVAWLHFKIK"
     gene            complement(10459..11205)
                     /locus_tag="ACFJAG_001129"
     CDS             complement(10459..11205)
                     /locus_tag="ACFJAG_001129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HFC3980424.1"
                     /translation="MDFRFDIIYEYRWMFLYGALTTLGLTVVATAGGSVLGLLLALAR
                     LIHLEKAGAPMRVLAWALRKVSLLYVTLFRGTPLFVQIVIWAYVWFPFFVHPSDGILV
                     SGEAAIALRRGYGPLIAGSLALIANSGAYICEIFRAGIQSIDKGQMEAACSLGLTYPQ
                     AMRYVILPQALRRMLPPLASEFITLLKDSSLLSVIAVAELAYVQNTITGRYSVYEEPL
                     YTAALIYLLMTTFLGWIFLRLEKRYNPQHR"
     gene            complement(11189..11368)
                     /locus_tag="ACFJAG_001130"
     CDS             complement(11189..11368)
                     /locus_tag="ACFJAG_001130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003708735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980425.1"
                     /translation="MNGKCRLKTARPAFLRRRATAVCRDKKVQAAVFTVKWRIILQRR
                     QFRRFLIRTVYGFSF"
     gene            complement(11384..12058)
                     /locus_tag="ACFJAG_001131"
     CDS             complement(11384..12058)
                     /locus_tag="ACFJAG_001131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HFC3980426.1"
                     /translation="MQIKKIMKWLPVALSLLGALGYTGYDSELVRTGIAVLNELGVEE
                     SAGRYETPVRRRASAKSGHSYTGTVSKVYDGDTLHVIDGDGAKHKIRMAYIDAPEMKQ
                     AYGTRSRDNLRAAAEGRKVSVRVFETDRYQREVAQVSAGKTDLNLMQVQDGAAWHYKS
                     YAKEQQDKADFADYADAQIQAERERKGLWKAKNPQAPWAYRRAGRSGGGNKDWMDSVG
                     EWLGIW"
     gene            complement(12127..12798)
                     /gene="rpiA"
                     /locus_tag="ACFJAG_001132"
     CDS             complement(12127..12798)
                     /gene="rpiA"
                     /locus_tag="ACFJAG_001132"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004751 - ribose-5-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009052 - pentose-phosphate shunt,
                     non-oxidative branch [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HFC3980427.1"
                     /translation="MTTQDELKRIAAEKAVEFVPENEYIGIGTGSTINFFIEALGKSG
                     KKIKGAVSTSKKSGELLARYDIPVVSLNEVSGLAVYIDGADEVNHALQMIKGGGGAHL
                     NEKIVASASEKFVCIADESKYVSRLGKFPLPVEAVESARSLVSRKLLAMGGQPELRIG
                     YTTFYGNQIVDVHGLNIDQPLTMEDEINKITGVLENGIFARDAADVLILGTEEGAKVI
                     YPCQG"
     gene            complement(12875..13357)
                     /gene="ispF"
                     /locus_tag="ACFJAG_001133"
     CDS             complement(12875..13357)
                     /gene="ispF"
                     /locus_tag="ACFJAG_001133"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008685 - 2-C-methyl-D-erythritol
                     2,4-cyclodiphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HFC3980428.1"
                     /translation="MTNIRIGQGYDVHQLIEGRKLILGGVEIPFEKGLLGHSDADALL
                     HAVTDALLGAAGLGDIGSHFPDTAAEFKDADSRVLLRAAYQSVQAQGWQAVNVDTTVI
                     VQKPKLAPHIPQMRANIAADLGIDISCVNIKGKTNEKLGYLGRMEGIEAQAAVLLVRI
                     "
     gene            complement(13389..14078)
                     /gene="ispD"
                     /locus_tag="ACFJAG_001134"
     CDS             complement(13389..14078)
                     /gene="ispD"
                     /locus_tag="ACFJAG_001134"
                     /EC_number="2.7.7.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050518 - 2-C-methyl-D-erythritol
                     4-phosphate cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HFC3980429.1"
                     /translation="MKRKNIALIPAAGIGVRFGADKPKQYVEIGSKTVLEHVLGIFER
                     HEAVDLTVVVVSPEDTFADKVQTAFPQVRVWKNGGQTRAETVRNGVAKLLETGLAAET
                     DNILVHDAARCCLPSEALTRLIEQAGNAAEGGILAVPVADTLKRAESGQISATVDRSG
                     LWQAQTPQLFQAGLLHRALAAENLDGITDEASAVEKLGVRPLLIQGDARNLKLTQPQD
                     AYIVRLLLNAV"
     gene            complement(14075..14809)
                     /gene="dnaQ"
                     /locus_tag="ACFJAG_001135"
     CDS             complement(14075..14809)
                     /gene="dnaQ"
                     /locus_tag="ACFJAG_001135"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit epsilon"
                     /protein_id="HFC3980430.1"
                     /translation="MMTRQIILDTETTGLYADGGDRLVEFAGLEMVNRQMTDKNLHLY
                     VHPERDMPEEAARVHGLTIQVLEEKNAPPFAEVGRQIADFLRGAELIIHNAKFDVGFL
                     NMEFRRMGLPTVEELGCTVTDTLAMAREMFPGQKASLDALCNRFSVDRSKRVLHGALI
                     DCELLGEVYLAMTRRQFDLMGETEEEEPTAKPVASAEMKLGAKLKVIKADEAELAAHE
                     EYLDGLGEACIWRKEAVPSENGGENA"
     gene            complement(14965..16275)
                     /locus_tag="ACFJAG_001136"
     CDS             complement(14965..16275)
                     /locus_tag="ACFJAG_001136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HFC3980431.1"
                     /translation="MDAKKGGLGLVKSRRFGPLFATQFLGAFNDNVFKTALFVMIGFY
                     GLGQNGVLPAGQMLNLGALLFILPYFLFSALSGQLGNKFDKAVLARWVKVLEIIIMAV
                     AAYGFYIRSAPLLLLCLFCMGAQSTLFGPLKYAILPDYLDDNELMMGNSLIESGTFVA
                     ILFGQILGTAVAGAPPYIVGILVLLVAVGGTAGSLFMPSVPAKAADTQIEWNIVRGTK
                     SLLRETVRHNPVFTAIIGISWFWFVGAVYTTQLPTFTQIRLGGNDNVFNLMLALFSIG
                     IAAGSVLCAKFGRERLMLAWVTVGALGLTVCGLVLVWLTHGHRFEGLNGIFWFLSQGW
                     AYPVMAVMTLIGFFGGFFSVPLYTWLQTASSETFRARAVAANNIVNGIFMVSAAVLSA
                     VLLFLFDSISLLYLIVALGNIPLAVFLIKRERRFLGAAAIRKKP"
     gene            complement(16265..16450)
                     /gene="ccoS"
                     /locus_tag="ACFJAG_001137"
     CDS             complement(16265..16450)
                     /gene="ccoS"
                     /locus_tag="ACFJAG_001137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008535 - respiratory chain complex IV
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome oxidase assembly protein
                     CcoS"
                     /protein_id="HFC3980432.1"
                     /translation="MESMFILVPISIILAFVIGWFFWWSGKNGQFDDLEGPAHRILMD
                     DDSTSKLIEKEKENDGR"
     gene            complement(16450..16749)
                     /locus_tag="ACFJAG_001138"
     CDS             complement(16450..16749)
                     /locus_tag="ACFJAG_001138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980433.1"
                     /translation="MHYFSIHDQSGRHIGFFILLADDESEARLQSGRFAVKLEDGTGN
                     HVLSPFGQTEIPQYWRVVKDRIELFFDEAPVGTLRNEYLTVSGQTFVLNDLIGNM"
     gene            17100..18296
                     /locus_tag="ACFJAG_001139"
     CDS             17100..18296
                     /locus_tag="ACFJAG_001139"
                     /EC_number="2.7.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008776 - acetate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006085 - acetyl-CoA biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HFC3980434.1"
                     /translation="MSQKLILVLNCGSSSLKGAVLDNGSGEVLLSCLAEKLNLPDAYI
                     TFKVNGEKHKVDLSAHPDHTGAVEALMEELEAHGLDSRIGAIGHRVVSGGELYNESIL
                     VDDEVIAGIEKCIPLAPLHNPAHLLGLRAAQSIFKGLPNVVVFDTSFHQTMPEVAYKY
                     AVPQELYEKYGLRRYGAHGTSYRFVADETAHFLGKDKKDLRMVIAHLGNGASITAVAN
                     GESRDTSMGLTPLEGLVMGTRSGDIDPSVFGFLAENANMTIAQITDMLNKKSGLLGIS
                     GLSNDCRTIEEEAAKGHKGAKLALDMFIYRLAKYIGSMAVAAGGLDALVFTGGIGENS
                     DIIRERVIGYLGFLGLNIDQEANLKARFGNAGVITTADSKAVAVVIPTNEELMIAHDT
                     ARLSGL"
     gene            complement(18346..18468)
                     /locus_tag="ACFJAG_001140"
                     /pseudo
     CDS             complement(18346..18468)
                     /locus_tag="ACFJAG_001140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
BASE COUNT         4339 a         5458 c         4605 g         4178 t
ORIGIN      
        1 gaatccgttt tttgagtttc gcttaagttc aataaatcct gaaactttaa tctcgccgtg
       61 aaaatgaatt ttctatttca atttgtcata tatagttaat ttttttaggg tattttattt
      121 tttgttccaa agtcaaaata tgccgtccga acgttcgggc ggcagacaaa acggcactgc
      181 ccgataaagg cagtgccgtt gtccgtttta aaccgtgaaa catcagccca aatcaaaggc
      241 tttatgcaat accctggttg ccagttccat gtatttttcg tcaatcaata cggaaacttt
      301 gatttcggag gtggaaatca tttggatgtt gatgccctct tcggcgagcg tgcggaagat
      361 tttggcggct acgccgacgt gcgaacgcat acccaaaccg actgcggaga ctttgcacac
      421 ggtgtcgtcg ccgtcgatag aagctgcgcc gatactgtct ttacgttccg acaggatttc
      481 caaagtctgt ttgtaatcgc cgcgcggtac ggtgaaagaa aaatcggttg tgccttcgct
      541 gccgacattt tggataatca tatcgacttc gatgttggca tctgcgaccg cgcccaaaat
      601 ctgataggcg acgccgggct tatcgggcac accgcgcacg ttgatgcggg cttggttttt
      661 atcgaatgcg ataccggtta cggcagctct ttccatgttg tcgtcctctt caaaggtaat
      721 taaggtgccg ttgccgccgt cttgcaggct gctcagtacg cgcaggcgca ctttgtattt
      781 tccggcgaat tctactgaac ggatttgcaa aactttcgaa ccgaggctgg ccagttcgat
      841 catttcttca aatgtaaccg tatccatacg gcgcgcttcg ggtacgacgc gggggtcggt
      901 ggtgtaaacg ccgtctacgt cggtatagat ttggcattcg tccgctttga gggctgcggc
      961 aagcgcaacg gcggaagtgt cggaaccgcc gcgtcctagc gtggaaatat tgccttcact
     1021 gctgatgcct tggaagccgg caacgatgac gactttgccg gcggcgaggt cggcgcgcat
     1081 tttttcgtca tcaatgcttt ctatgcgggc tttggtgtgg gcggtatcgg ttttgaggga
     1141 gacctgccag cctgtgtagc ttttggcatc cacgccgata tccttcaatg ccattgccaa
     1201 aaggccgatg gttacttgtt cgccggtagc taagacgacg tccagctcgc gcggatcggg
     1261 atgctcctgc atttcgtgcg ccaacgcaac cagacggttg gtttcgccgc tcatggcgga
     1321 tacgacgacg acgatatcgt gtccttcggc gcgggcttta gcgacacgtt tggccacgtt
     1381 tttaatgcgc tcgggcgagc ctacggatgt gccgccgtat ttatgtacga ttaacgccat
     1441 gtttcatgct ttcttgtgtg ggattggtcg ggcagcatgg tttgctggaa aagcggctat
     1501 tattactatt ttttacatga agttcaagaa cggactgcgc tttcccgcct gccgtttgac
     1561 agcggtcagc gaaaaacctg ttctttcaga tttttgacaa aatgccgtct gaacggtttt
     1621 cagacggcat acggacagta attaagcaac ggacaacgca ttttgctgat aacgcagcag
     1681 ttcgcctatg cctttttgcg ccagtgcaac cagtttgccc aactcgtcca aactgaatgg
     1741 cgcgccttcc gccgttccct gtatttcgat gattttcccc gatgcggtca tgacgatgtt
     1801 cacatcactg tcgcagccgg agtcttcggg ataatccaaa tccaaaagcg gcacgccgtt
     1861 cactacgccc gctgatacgg cggcaacagc ttcgaggatg gggttttcac tcaaaatgcc
     1921 gtctgaaacc agtttgccga cggcgatttg cagcgcgaca aacgcaccgg taatcgaagc
     1981 cgtacgcgtg ccgccgtccg cctgaatcac atcgcaatca atcaggattt gtcgttcgcc
     2041 gagtttttcc atatccacga ccgcgcgcag cgaacgcccg atcaagcgtt ggatttcttg
     2101 tgtgcgtccc gactgtttgc ccgccgaagc ttcgcggcgc atacgcaaag cggttgaggc
     2161 aggcagcata ccgtattccg ccgttaccca gccttggttt ttgccgtgca gaaacggtgg
     2221 ggcattttcg tccacggaag cggtacaaat cactttggta ttaccgcatt caataaggca
     2281 cgaaccgtcc gtatgcggca ggaaatgagg ggtgattttg atatcgcgca ggctgtcggc
     2341 ggcgcgtgag gtgcggatat aatcaggcat actgccctcc cgttaaaaac agataaatta
     2401 aaaagcctta aatatgaaaa atcacattta aggccttcaa actgaaaatt tctacgcctc
     2461 ttcggctttg ctacggataa tcaaaagcgg caggtggctt tggcgcatta ccgtttcggc
     2521 gaaactgccc atcaaaaggt gcatcagccc ggtgcgcccg tgcgtgccca acaccagcag
     2581 gccggcaccg ttttcatcgg cataatcgac caaatcctgc gccatttcgc gcgcaccctt
     2641 attggcaacc agcaggtgtt tgacggtatt tcccacaccc agttcccggg cggtgcgctc
     2701 ggcggcatcc aaaacctcgt tgccttgcgc gacggcggcg gcctcgtaac tttcgtgttg
     2761 caaaaattcg ggggcgagcg ccatatattc ggcagggttg gcaacgtgta ccaaagtcag
     2821 acgcgcaccg ttgaccccgg caagctcggc ggcgtgtttc agggcattga tggacgtttc
     2881 actgccgtca acggcaacga ccagatgttt gtacatatcg tattctcctt ttgcaccgtc
     2941 tcacggtgcc gtctcttcag gtttgcgcaa aggcagtctg cgccgtttca ttatagaccc
     3001 gccgtcgggc tttatacaac agccgaacag cctgactgct ttccagtata atatgccgct
     3061 ttcgtgcagt caggcatttt tttgccggct ttcgttcact ttttgatttg acgcaatctt
     3121 gcaggattcg accatgtccg acaacgcttt gacctcttcg cgacgcttcg gcggcatcgc
     3181 cagactctac ggagactctg ccttgacgca cttttcacag gcacacgtct gcgtggtcgg
     3241 cgtgggcggg gtcggctcgt gggcggtcga ggctttggcg cgcacgggca tcgggcgttt
     3301 gactttgatt gatttggaca acgttgccga atcgaatgtc aaccgccagc tgcacgccct
     3361 gaccggcgac ttcggcaaag caaaagttac cgccttgcgc gaacgtatta cacaaatcaa
     3421 tccgcaatgc gaagtatttg aaattgaaga tttcgttacc gaagacaatt tgccggaata
     3481 cttcggaaaa ggttttgatt tcgtcatcga cgcgatcgac caagtgcgcg tcaaagcggc
     3541 aatggcggct tattttgtgg aacgcaaaca accgtttgtc ctcagcggcg gcgcgggcgg
     3601 acagaaaaat cccgccctga ttcaaaccgc cgatttaagc cgcgtaaccc acgacccgct
     3661 gcttgccaac ctgcgctaca ccttgcggaa acgctacggc ttcagccgcg atactaagga
     3721 aaaaatgcgc gtgccgtgcg tgtattcgac cgaaaatatc atgccgccgc aatcgggcgc
     3781 agcgtgttct gccgatgccg cgccgcaggg cttgtcatgc gccggctatg gcgcaagtat
     3841 gctcgttacc gcttcgttcg gactgtattg cgcacaggcg gcggtggaac acatcgcggg
     3901 caaaaaataa gcaatgccgt ctgaaacagg attcagacgg catttgaaca aacgcggcaa
     3961 tcaagctgtc ggttcagaaa aaccaacatc ggcacgccta aaaccgtatt cacaatctac
     4021 tccttttcaa aatatttgca tttaaaagcc gttataatgc cgtccgaaca tctgcccgac
     4081 cacattatgc gtgaatgccg gcagattgtt ttcttttgta aacttatatt aaaattcact
     4141 taccaattca cgccatgccg cccatccctg ccctatccgc accatccgag cacactgtcg
     4201 catgggtatt cggccaaccc gttaccgatt tgccgcagga tttgtttatc ccgcccgacg
     4261 cgctgaaagt cgtattgggc agttttcaag gccctttgga tctgctgctc taccttatcc
     4321 gcaagcagaa catcgatgtt ctcgatattc cgatggtgga aattaccggg cagtatctgc
     4381 actatattgc ccaaatggaa gcctatcagt ttgatttggc ggcggaatat cttttgatgg
     4441 cggcaatgct gattgaaatc aaatcgcgcc tgctgctgcc gcgtaccgaa gccgtcgaag
     4501 acgaagaggc cgacccgcgt gccgagttgg tgcgccgtct gcttgcctac gagcaaatga
     4561 aactggcggc gcagggtttg gacgcgctgc cgcgtgcggg acgggatttc gcgtgggctt
     4621 acctgccgct ggaaattgca gccgagacga agctgcccga ggtttacatc gccgatttga
     4681 tgcaggcatg gttgggcatt ctttctcggg caaaacatac gcgcagccac gaagtaatcc
     4741 aagaaaccct ttccgtgcgc gcgcaaatga cggcaatcct gcgccgtttg aacgaacacg
     4801 ggatatgcag gtttcacgac ctgttcaatc ccgaacaggg cgcggcttac gtgatcgtca
     4861 acttcatcgc cctgttggag cttgccaaag aaggattggt cggaatcgta caggaagacg
     4921 gtttcggaga aatccgaatc agcctcaatc atgagggggc gcattcagac ggcattttcg
     4981 gcacacgggg cgggcgcgat gtgttctaat acgccccaag ccgccaccag aaatcgggag
     5041 acacgccata tgaccggcat catacattcg ctgctcgaca ctgacctcta caaattcact
     5101 atgctgcaag tagtcctgca ccagtttccg cagacgcaca gcctttacga attccgctgc
     5161 cgcaacgtct cgaccgtcta tccgcttgcc gacatcaggg aggacttgga agccgaactc
     5221 gacgcgctct gccggctgcg cttcacccac gacgaactcg gctatctgcg ctccctgcgt
     5281 ttcatcaaaa gcgactttgt cgattatctc gaactcttcc agctccaacg ccgctttgtc
     5341 gaagtcggca cagacgataa aggccgtctg aacatccgta tcgaaggccc gatgatacag
     5401 gcgatgtttt ttgaaatctt catcctcgcc attgtcaacg aactttactt ccgccggctg
     5461 gaaacccctg ccgttatcga agaaggcgaa cgccggcttc aagccaaagc cgcgcgcctg
     5521 aaagaaatcg ccgccgcaca gaatccggac gaaccgccct tcctgatttc cgacttcggc
     5581 acgcgccgcc gctacaagct cgcgtggcag gaacacgtca tccgcaccct gctcgaagcc
     5641 gccccaagca tcgtgcgcgg cacaagcaac gtttacctcg ccaaaaaact cggcatcacc
     5701 cccatcggca ccatggcgca cgaattcctc caagccttcc aagccctcga cgtgcgcctg
     5761 cggaatttcc aaaaggccgc gctcgaaagc tgggtgcacg aataccgggg cgatttgggc
     5821 gttgccctga ccgacgtggt cggtatggat gccttcctgc gcgatttcga cctctatttc
     5881 gccaaactct tcgacgggct gcgccacgac agcggcgacc cttacgtttg gggcgacaaa
     5941 gcctacgccc actatcaaaa gctcaaaatc gacagccgca ccaaaatgct gaccttctcc
     6001 gacgggctgg acatcaaacg ctcttgggca ttgcaccaat atttcaaagg ccgcttcaaa
     6061 accggcttcg gcatcggcac caacctcacc aacgatatgg ggcatacgcc cttgaatatc
     6121 gtgttgaaac tggtcgaatg caacgggcag tccgtcgcca agctctccga ctcgccgggc
     6181 aaaaccatga ccaacaacag caccttcctc gcctacctgc gccaagtgtt cggcataccc
     6241 gaacctagaa cgccgtaaac cggcagaaaa agcgtacaat tcctgtttcc gccgcataaa
     6301 atcttttaaa ataccgcctg atttgaattt aaccgaaaga ccgaacttca tgaacctaca
     6361 tcaaaccgtc gaacacgaag ccgccgccgc ctttgccgcc gcaggcatcg ccggcagccc
     6421 cgttgtcttg cagccgacca aaaatgccga acacggcgat ttccaaatca acggcgtgat
     6481 gggtgcggcg aaaaaagcca aacaaaatcc gcgcgaactg gcgcaaaagg tcgccgacgc
     6541 attggcgggc aacgccgtca tcgaaagcgc ggaagtggcc ggacccggct ttatcaacct
     6601 gcgcctgcgc cacgaatttc tcgctcaaaa cattcatgcg gctttgaacg acgcgcgttt
     6661 cggcgtagcg aaaactgccc aaccgcaaac cgtcgttatc gactattctt cgcctaatct
     6721 ggcgaaggaa atgcacgtcg gccatctgcg ctccagcatc attggcgaca gcatttcacg
     6781 cgtgttggaa tttacgggca acaccgtcat ccgccaaaac catgtcggcg actggggtac
     6841 gcagttcggc atgttggttg cttatttggt cgagcagcag aaagacaatg ccgcgttcga
     6901 gctggcggat ttggagcagt tttaccgcgc cgccaaagtg cgctttgacg aagaccctgc
     6961 ctttgccgac accgcacgcg aatacgttgt gaagctgcaa ggcggcgatg aaaccgtgtt
     7021 ggcgttgtgg aaacagtttg tcgatatttc gctctcgcac gcccaagccg tttacgacac
     7081 gctgggcttg aagctgcgcc ccgaagatgt ggcgggcgaa tcgaaataca acgacgattt
     7141 gcagcccgta gccgatgatt tggttcaaaa aggcctggcg gttgaggacg acggcgcgaa
     7201 agtcgtgttc ttggacgagt tcaaaaacaa agagggcgaa cctgccgcat ttatcgtgca
     7261 aaaacaaggc ggcggcttcc tttatgcttc caccgatttg gcgtgcctgc gctaccgcat
     7321 aggccgtctg aaagccggcc gcctgctgta cgtcgtcgac caccgccaag ccctgcactt
     7381 cgagcaactc tttaccactt cccgcaaagc aggctatctg cctgaaaatg caaaagccga
     7441 gtttatcggc ttcggcacca tgatgggcaa agacggcaaa ccgttcaaaa cgcgcagcgg
     7501 cgacaccgta aaactggttg acctgctgac cgaagccgtc gagcgcgcca ccgctttggt
     7561 gaaagaaaaa aatcccgaat tgggcgcgga tgaagccgcc aaaatcggca agaccgtcgg
     7621 catcggcgca gtcaaatacg ccgatttaag caaaaaccgc accagcgatt atgtgttcga
     7681 ctgggacgcc atgctctcat ttgaaggcaa caccgccccc tacctgcaat acgcctacac
     7741 ccgcgtgcaa agcgtgttcc gcaaagccgg agaatgggac gcaaccgcac cgaccgtttt
     7801 gaccgaacca ctggaaaaac agcttgccgc cgagcttctg aaatttgaaa acgtgctgca
     7861 aagcgtggcg gacaccgcgt atccgcacta cctcgccgcc tacctttacc aagccgccac
     7921 cctgttcagc cgcttctacg aagcttgccc gattttgaaa gccgaaggcg caagccgcaa
     7981 cagccgcctg caactggcaa aacttaccgg caacacgctg aaacaaggct tggatttgct
     8041 gggcatcgat gtgttggacg taatgtaaac accgcaccgc ccgccatcct catccgaatc
     8101 tgaaaaaagc ggcgcgatac accgtatccg ccgcctttcc caaaatgcga aacaaacaaa
     8161 cgccaagcaa gcaagcaagc aagcaagcaa gcaaaaatta tagccccttt cctgccggcg
     8221 cacacacttt ccgcgcggca catccccctt tttccgcccc tcaaacccgc cttttcttca
     8281 ggcagggttt cagcccgcct cctttccctg ttttcctttc cccgacacgc gtgcgcgccc
     8341 ctgccgcacc gtgccgcgct tttgcgcccg gacggcatcg ttccgccatc tggttttctg
     8401 ttttaaatac cgctgtttca gaaagaaatg cagatgtttc gacacacagg acgacatata
     8461 aagtaccgcc ctatgtgtcg tcctgatttg gaaggggtta cacccctccc aaccagataa
     8521 agtctgatcc tgccgccccg aaggacggat gtccaagtgg cggggtttca accgaaaagg
     8581 aaatacgatg aatattcacg ccctgctctc caaacaatgg acgctgccgc cattcctgcc
     8641 gaaacggctg ctgctgtccc tgctgatact gctggtcccc aatgcggtgt tttgggtttt
     8701 ggcactgctg accgccaccg cccgcccgat tgtcaatttg gactaccttc ccgccgcgct
     8761 gctgatcgcc ctgccttggc gtttcgtcaa aattgccggc gtattggcgt tttggctggc
     8821 ggttttgttt gacgggctga tgatggtgat ccaactcttc ccttttatgg acctcatcgg
     8881 cgccatcaac ctcgtcccct tcatcctgac cgcccccgcc ccttatcaga taatgaccgg
     8941 gctgttgctg ctgtatatgc tggcgatgcc gtttgtgttg caaaaagccg ccgtcaaaac
     9001 cgacttccga cacattgccg tctgtgccgc cgttgtggcg gcagccggct atttcaccgg
     9061 ccatttgagt tactacgacc gggggcggat ggccaatatc ttcggcgcaa acaacttcta
     9121 ttacgccaaa agtcaggcga tgctctacac cgtcagccag aatgccgact ttattaccgc
     9181 cggcctggtc gaccccgtct tcctcccctt gggcaatcag cagcgtgccg ccacgcggct
     9241 gagtgagccg aaatctcaaa aaatcctctt tatcgtcgcc gaatcttggg ggctgccggg
     9301 caatcccgag cttcaaaacg ccacttttgc caaactgctg gcgcaaaaag accgtttttc
     9361 ggtttgggaa agcggcagtt ttcccttcat cggcgcgacg gtcgaaggcg aaatgcgcga
     9421 attgtgcgcc tacggcggtt tgcgcgggtt cgcactgcgc cgcgcacccg acgaaaaatt
     9481 tgcccgctgc ctccccaacc gtttgaaaca agaaggttac gccacctttg cgatgcacgg
     9541 cgcgggtagt tcgctttacg accgcttcag ctggtatccg agggcgggct ttcaaaaaat
     9601 caaaaccgcc gaaaacctga tcggtaaaaa aacctgcgcc attttcggcg gcgtgtgcga
     9661 cagcgagctg ttcggcgaag tgtcggcatt tttcaaaaaa cacgacaagg gactgtttta
     9721 ctggatgacg ctgaccagcc acgccgacta tcccgaatcc gacattttca accacaggct
     9781 caaatgcacc gaatacggcc tgcccgccga aaccgacctc tgccgcaatt tcagcctgca
     9841 cacccaattc ttcgaccaac tggcggattt gatccgacgc cccgaaatga aaggcacgga
     9901 agtcatcatc gtcggcgacc atccgccgcc cgtcggcaac ctcaatgaaa ccttccgcta
     9961 cctcaaacag ggacacgtcg cctggctgca cttcaaaatc aaataacaac aatgccgtct
    10021 gaacgcacca acagccttca gacggcattt tgcagacaga ccgacctcct caagcccact
    10081 tttttcatca tctccgataa attgctttgt aagaatccaa aaatccaaaa tcacaggaag
    10141 ttatcaaaaa aacagaaacc atccgccgtc gttcccgcga aagcgggaat ccagacccgg
    10201 aaaccgcaga aatttatcgg aaaaaccgaa actcgaaaac aacggacaga attcccgcct
    10261 gcgcaggaat gacggctcat acatcaccca aaaaaaattg aaaccaaaca gctgggattc
    10321 cctcttgcgt gaggctgaca gatgccgtct gaaagacttt cagacggcat agggcgtttt
    10381 ctctttgaat ttaaattttg ccacaaaaaa gccgccccaa atgaataccc gggcagcttt
    10441 ttgttgatat gactccaatc agcggtgttg cggattgtaa cgtttttcca aacgcaggaa
    10501 tatccagcct aagaaagtcg tcatcaacag ataaatcagg gcggcggtgt aaagcggttc
    10561 ttcataaacc gaataccggc ccgtaatcgt attctgaaca tacgccaact ccgccacagc
    10621 aatgaccgac agcagcgagc tgtctttcaa gagcgtgatg aactcgctcg ccaaaggcgg
    10681 cagcatacgg cgcaatgcct gcggcagaat cacatagcgc atcgcctgcg gataggtcag
    10741 tcccaaagaa cacgccgcct ccatctgtcc tttgtctata gactggatgc ccgcgcggaa
    10801 aatctcacag atatacgccc ccgagttggc gatcagtgcc aaagaaccgg caatcagcgg
    10861 cccgtatccg cgacgcagcg cgattgccgc ctcgccgctg accaaaatgc cgtctgaagg
    10921 atggacgaaa aacggaaacc acacatacgc ccaaatcaca atctgcacaa acagcggcgt
    10981 accccggaac agggtaacgt acagcagcga aaccttacgc aacgcccacg ccagcacgcg
    11041 catcggcgca ccggcttttt ccaagtgaat caggcgcgcc aacgccaaca acagacccaa
    11101 taccgaaccg cccgccgtcg ccacgaccgt cagccccaag gtcgtcagtg cgccgtaaag
    11161 aaacatccag cggtattcgt aaataatgtc aaaacgaaaa tccataaacc gtccgtatca
    11221 aaaaccggcg gaactgccgc cgttgcaaaa taatccgcca ttttaccgta aaaaccgccg
    11281 cctgaacttt tttatcgcgg cagacggcgg ttgcgcgtct ccgcaaaaat gcagggcgcg
    11341 cggttttcag acggcatttg ccgttcaagg ccgtgcggtg tctttaccaa atgcccaacc
    11401 attcgcccac ggaatccatc caatccttat tgcccccgcc gctcctgcct gcccggcggt
    11461 acgcccacgg cgcttgcgga tttttagctt tccacaatcc tttgcgttcc ctttccgcct
    11521 gaatttgagc gtcggcatag tcggcaaaat ccgccttatc ctgctgttct ttagcataac
    11581 ttttataatg ccacgccgcc ccgtcctgca cctgcatcag gttcaaatcg gttttgccgg
    11641 cggatacctg cgccacttcg cgctgatagc ggtcggtttc aaacacacgt acactgactt
    11701 tcctaccctc cgccgccgcg cgcaggttgt cgcgcgaacg tgtaccgtaa gcctgtttca
    11761 tctccggtgc gtcgatatac gccatccgaa ttttatgttt cgcgccgtcg ccgtcgatga
    11821 cgtgaagggt atcgccgtca tagactttgg acaccgtgcc tgtgtagctg tggccggatt
    11881 tcgccgatgc ccggcggcga acgggtgttt cgtacctacc cgcactctcc tctacaccca
    11941 attcattcag tacggcaata ccggtacgga caagctcgct gtcgtatccc gtataaccca
    12001 acgcgcccaa aagcgacagg gcgacgggaa gccatttcat gattttttta atctgcatat
    12061 ttttcaaatg ccgatgccgt ctgaacatct ctgaaccgga tttcagacgg catcttaacg
    12121 tcaggattac ccttggcagg gatagatgac tttcgcaccc tcttccgtcc ccaaaatcaa
    12181 cacatcggcg gcatcgcggg cgaatatgcc gttttcgagt acgccggtga ttttgttgat
    12241 ttcatcttcc atcgtcagcg gctgatcgat attcaagccg tggacatcga cgatttggtt
    12301 gccgtaaaac gtggtgtagc cgatacgcag ttcgggctgt ccgcccatgg caagcagttt
    12361 gcgcgaaaca agggagcgcg cgctttcgac ggcttccacg ggcagtggga atttgcccag
    12421 ccgggaaaca tatttgcttt cgtccgcaat gcagacgaat ttttctgatg cgctggcgac
    12481 gattttttcg ttgaggtgcg cgccgccgcc gcccttaatc atttgcaggg cgtggttcac
    12541 ttcgtccgca ccgtcgatat agaccgccaa accggacact tcgttcaggg acacgacggg
    12601 aatgtcgtac cgggcaagca gttcgccgga ttttttggag gttgaaaccg cgcctttgat
    12661 ttttttaccg cttttgccca aggcttcgat gaagaaattg atggtcgaac cggtaccgat
    12721 gccgatgtat tcgttttcgg gtacgaattc gactgctttt tcggcggcga tgcgcttgag
    12781 ttcgtcttgt gtcgtcatat ttttatcctt tgggaaaccg tatcaacaaa cagccgccat
    12841 cttaacattt ttttgcacgt cctgcccgcc gcgttcaaat ccgtaccagc aataccgccg
    12901 cctgcgcctc tatgccttcc atccgcccga gatagccgag tttttcgttg gttttgcctt
    12961 tgatattgac gcacgaaata tcgataccca aatcggcggc gatgttggca cgcatttgcg
    13021 gaatgtgcgg tgcgagtttg ggtttctgta caatcacggt cgtatcgaca ttgaccgcct
    13081 gccaaccctg cgcctgaacg ctttgatacg ccgcacgcaa aaggacgcgg ctgtccgcat
    13141 ctttgaactc tgcggcggtg tcgggaaaat ggctgccgat gtcgcccaaa cctgccgcac
    13201 cgagcagcgc gtcggtaacg gcgtgcagca gcgcgtcggc atcggaatgc ccgagcagcc
    13261 ctttttcaaa tgggatttca actccgccaa gtatcagctt tctgccttcg atcaattggt
    13321 ggacatcgta gccctgtccg atacggatat tcgtcatcgt ttgtgttcct gatgttttga
    13381 attgaatttc agacggcatt gagcagcagc ctgacgatgt atgcgtcctg cggctgcgtc
    13441 agtttcaaat tgcgcgcgtc gccctgtatc agtagcggac gcacacccag tttttccacg
    13501 gcggacgctt catcggtaat gccgtccaag ttttccgcag ccaatgcgcg gtgcagcaaa
    13561 cccgcttgaa aaagctgcgg cgtttgcgcc tgccaaagcc ccgaacggtc gacagttgca
    13621 ctgatttgtc cgctttctgc gcgcttgagc gtatcggcaa cgggaactgc caaaatcccg
    13681 ccttcggcgg cgttgcccgc ctgttctatc aaccgcgtca gagcttcaga cggcaggcag
    13741 cagcgggcgg catcgtgtac cagaatattg tcggtttccg ccgccaaacc ggtttccaac
    13801 agttttgcca caccgttgcg gacagtttcg gcgcgggtct gtccaccgtt tttccacacc
    13861 cgaacctgtg gaaatgccgt ctgaacctta tcggcaaacg tgtcttcggg cgagacgaca
    13921 acgacggtca aatcgacggc ctcatgccgt tcaaaaatac caagtacatg ttctaaaacg
    13981 gttttgcttc cgatttcgac atattgcttg ggtttgtccg caccgaaacg caccccgatg
    14041 ccggcggcgg gaatcagcgc gatatttttg cgtttcatgc gttttccccg ccgttttcag
    14101 acggcacggc ttccttacgc caaatacagg cttcgcccaa gccgtcgaga tattcttcgt
    14161 gcgccgccag ttcggcttca tccgccttaa tcactttcag tttggcaccg agtttcattt
    14221 cggcagatgc aacaggtttg gctgtcggtt cttcctcctc ggtctccccc atcaagtcga
    14281 attgccgccg cgtcatcgcc agatagactt cgcccaaaag ttcgcagtcg atcaatgcgc
    14341 cgtgcaggac gcgcttgctg cggtcgacgg aaaaacggtt gcacagggca tccagactgg
    14401 ctttctgccc ggggaacatt tcgcgcgcca tcgccagggt atcggtaacg gtgcagccga
    14461 gttcctcgac ggtcggcagc cccatccggc ggaactccat attgaggaag cccacatcga
    14521 atttggcatt gtggataatc agttccgcac cgcgcagaaa atcggcaatc tgcctgccga
    14581 cctctgcaaa cggcggcgcg tttttctctt ccaaaacctg tatcgtcaag ccgtggacgc
    14641 gtgccgcctc ttcgggcata tcgcgctcgg ggtggacata gaggtgcagg tttttgtcgg
    14701 tcatttggcg gttgaccatt tccagaccgg caaactcgac cagacggtcg ccgccgtcgg
    14761 catacaggcc ggtggtttcg gtatcgagga tgatttggcg tgtcatcata tcggtgtctt
    14821 tcttctgtct tcgtaaattg attatttttt aagcaatgta tttttctgtt ttcatttcaa
    14881 tgcacaaacc cacttattca cagtgtgttc acaacattgg gcaggcggat tgtgtatttt
    14941 ggggacaatt tttccagacg gcattcaagg ttttttcctg attgccgccg cgcctaaaaa
    15001 ccgcctttcg cgcttaatca aaaataccgc caacggaata ttgcccaagg cgacaatcag
    15061 atacagcagg gaaatgctgt caaacaaaaa cagcaatacc gcgctcaaaa cggcggcgga
    15121 aaccataaag atgccgttaa cgatattgtt ggcggcaacg gcgcgggcgc ggaaagtctc
    15181 gctgctggcg gtttgcagcc aggtatagag cggaacggag aaaaatccgc cgaaaaagcc
    15241 gatcagcgtc atcaccgcca tcacggggta tgcccatcct tgcgataaaa accaaaaaat
    15301 gccgttcagc ccttcaaaac ggtgtccgtg cgtcagccac accaaaacca ggccgcaaac
    15361 cgtcaaaccc aacgcaccaa ccgttaccca agccaacatc agccgttccc tgccgaactt
    15421 ggcacacagt accgaaccgg cggcaatacc gatggaaaac aaagcaagca tcaggttaaa
    15481 aacattatcg ttgccgccca aacggatttg ggtaaaggtc ggcagttgcg tggtataaac
    15541 cgcgccgaca aaccaaaacc acgagatgcc gataatggcg gtaaaaacgg gattgtgccg
    15601 caccgtttca cgcagcaggg attttgtacc acggacaata ttccactcga tttgggtatc
    15661 ggcagccttg gcgggtacgg acggcataaa caggctgccg gccgttcctc cgacggcgac
    15721 cagcaaaacc agtatcccga caatataagg cggcgcgccg gcaaccgccg ttcccaaaat
    15781 ctgaccaaac aggatggcga caaacgtacc ggattcaatc aggctgttgc ccatcatcag
    15841 ctcgttgtcg tcgagataat cgggcagaat ggcatattta agcgggccga acagcgtcga
    15901 ttgcgcgccc atgcaaaaca ggcagagcaa gagcagcggg gctgaccgga tataaaaccc
    15961 gtatgccgcc accgccataa tgatgatttc cagcaccttg acccaacgcg ccaaaacggc
    16021 cttgtcgaat ttgttaccca actgccccga cagcgcggaa aacaggaaat acggcaaaat
    16081 aaacagcagt gcgcccaagt tcaacatctg tccggcaggc agaacgccgt tttgccccaa
    16141 accgtaaaac ccgatcatca caaacagcgc ggttttgaac acattgtcat tgaacgcgcc
    16201 gagaaactgc gtagcgaaaa gaggcccgaa acggcggctt ttaaccagtc ccaaaccgcc
    16261 ttttttagcg tccatcgttt tccttctctt tttcaatcag tttacttgtc gaatcatcat
    16321 ccatcaaaat gcggtgcgcc ggtccttcca aatcgtcaaa ctgtccgttt ttgcccgacc
    16381 accagaaaaa ccagccgatg acaaatgcca aaataatgct gatgggcacc agaataaaca
    16441 tactttccat cacatattcc ctatcaaatc gttcaaaaca aaagtctgcc ctgacacggt
    16501 cagatattcg ttacgcaaag ttccgacggg ggcttcgtca aaaaacagct cgatacggtc
    16561 tttgaccacg cgccaatatt ggggaatttc cgtctgaccg aacggcgaca ggacatggtt
    16621 gcccgtccca tcttccaatt taacggcaaa acgcccgctc tgcagccgtg cttccgattc
    16681 gtcgtcggca agaaggatga aaaagcctat atgccgtccc gattggtcat gaatactgaa
    16741 ataatgcata aattccccac ccgccttttt tcagacggca tcaactaaaa acagggcgaa
    16801 tgtaccagtt tggacgggaa aaatgcaaag aaattctccc tcccccagcc gaaaacaccg
    16861 gcaaaccgca tatccccctt ttttccgtca aaatacccga cttccgccat tttcacgcaa
    16921 acgcccgatt aagccaagca attgcaaaga ttttttgcta gaatagcctg cttcttttat
    16981 caaccgtttc agacggctcc actactttcc cgtcaaggaa agcaaagcgg attcggcacg
    17041 aatccgatta gtatccgtgt ccgattccaa tgccgtctga aactttccgg agtaagaaaa
    17101 tgtcccaaaa attgatcttg gttttgaact gcggcagctc gtccctcaaa ggcgcggtcc
    17161 tggataacgg cagcggcgaa gtcctgctga gctgccttgc cgaaaaactc aacctgcccg
    17221 atgcctacat tacattcaaa gtaaacggcg aaaaacacaa agtcgatctg tccgcacacc
    17281 ccgaccacac cggcgcggtc gaagccctga tggaagaact cgaagcccac ggcctcgaca
    17341 gccgcatcgg cgccatcggc caccgcgtcg tcagcggcgg cgaactgtac aacgaatcca
    17401 tcctcgttga cgacgaagtc atcgccggca tcgaaaaatg catcccgctg gctcctctgc
    17461 acaatcccgc ccacctcttg ggcctgcgtg ccgcgcaaag cattttcaaa ggcctgccca
    17521 acgtcgtcgt attcgatacc tccttccacc aaaccatgcc cgaagtcgcc tacaaatacg
    17581 ccgttccgca ggagttgtat gaaaaatacg gcctgcgccg ctacggcgcg cacggtacca
    17641 gctaccgctt cgttgccgac gaaaccgcgc acttcctcgg caaagacaaa aaagacctgc
    17701 gtatggtcat tgcccacttg ggcaacggcg catccatcac cgccgtcgcc aacggagaat
    17761 cgcgcgacac cagtatgggc ctgaccccgc tggaagggct ggtaatgggt acgcgcagcg
    17821 gcgacatcga tccttccgta ttcggcttcc tcgccgaaaa cgccaatatg accattgccc
    17881 aaatcaccga catgctgaac aaaaaatccg gcctgctcgg catttccggc ctgtccaacg
    17941 actgccgcac cattgaagaa gaagccgcca aggggcataa aggcgcgaaa ttggccttgg
    18001 atatgtttat ctaccgcctt gccaaataca tcggcagtat ggcggttgcc gcaggcggct
    18061 tggacgcact ggtctttacc ggcggtatcg gcgaaaactc cgacatcatc cgcgaacgcg
    18121 taatcggcta cttgggcttc ctcggtctga acatcgacca agaagccaac ctgaaagccc
    18181 gcttcggcaa cgccggcgtg attaccactg ccgacagcaa agccgttgcc gtggtcattc
    18241 cgaccaacga agagctgatg attgcccacg ataccgcccg tttgagcggt ctgtaaggtt
    18301 ttatcctcac gcgaactgcc tccggaaacg gaggcagttt ttttatagtg gattaaattt
    18361 aaaccggtac agcgttgcct cgccttgccg tactatttgt actgtctgcg gcttcgtcgc
    18421 cttgtcctga tttttgttaa tccactatat ccggctttcc atgcttaaac agcactacct
    18481 cttttcagac attgacggtt gcagccgcct acctgaacct taatgattga ctatttttta
    18541 atcatgttat tattttccat aaaatacatg gcattaagat
//
LOCUS       DAXFZM010000040        18554 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.040, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000040 DAXFZM010000000
VERSION     DAXFZM010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 18554)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18554)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18554
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.040"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..896)
                     /gene="mafA"
                     /locus_tag="ACFJAG_001141"
     CDS             complement(<1..896)
                     /gene="mafA"
                     /locus_tag="ACFJAG_001141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin MafA"
                     /protein_id="HFC3980435.1"
                     /translation="MKTLLLLIPLVLTACGTLTGIPAHGGGKRFAVEQELVAASSRAA
                     VKEMDLSALKGRKAALYVSVMGDQGSGNISGGRYSIDALIRGGYHNNPDSATRYSYPA
                     YDTTATTKSDALSGVTTSTSVLNAPAAALTKNNGRKGERSAGLSVNGTGDYRNETLLA
                     NPRDVSFLTNLIQTVFYLRGIEVVPPEYADTDVFVTVDVFGTVRSRTELHLYNAETLK
                     AQTKLEYFAVDRDSRKLLIAPKTAAYESQYQEQYALWMGPYSVGKTVKASDRLMVDFS
                     DITPYGDTTAQNRPDFKQNNGK"
     gene            complement(1015..2115)
                     /locus_tag="ACFJAG_001142"
     CDS             complement(1015..2115)
                     /locus_tag="ACFJAG_001142"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009254 - peptidoglycan turnover [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HFC3980436.1"
                     /translation="METQLYIGIMSGTSMDGADAVLVRMDGGKWLGAEGHAFTPYPDR
                     LRRKLLDLQDTGTDELHRSRMLSQELSRLYAQTAAELLCSQNLAPCDITALGCHGQTV
                     RHAPEHGYSIQLADLPLLAELTRIFTVGDFRSRDLAAGGQGAPLVPAFHEALFRDDRE
                     TRVVLNIGGIANISVLPPGAPAFGFDTGPGNMLMDAWTQAHWQLPYDKNGAKAAQGNI
                     LPQLLGRLLAHPYFSQPHPKSTGRELFALNWLETYLDGGENRYDVLRTLSRFTAQTVC
                     DAVSHAAADARQMYICGGGIRNPVLMADLAECFGTRVSLHSTAELNLDPQWVEAAAFA
                     WLAACWINRIPGSPHKATGASKPCILGAGYYY"
     gene            2440..4014
                     /locus_tag="ACFJAG_001143"
     CDS             2440..4014
                     /locus_tag="ACFJAG_001143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003748724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006817 - phosphate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HFC3980437.1"
                     /translation="MAQIQMSANVKTINAVFAAMLVGTVGYFIYWGLGYTHYNYAALF
                     IIATMFGVFMAFNIGGNDVANSFGTSVGAGTLTIPQALLIAAVFEVSGAVIAGGEVTD
                     TIRKGIVDLKGVDFEPIQFVFIMMSALLAAALWLLFASRKGLPVSTTHAIIGGIVGSA
                     LCMAFTHNADGVALIRWGKLGEIGMSWVLSPVLGGAVSYFLFSRVKKNVLDYNAWAEG
                     TLKGIKQEKKAYKERHRLFFEGLSEAEKVEYATKMAHDAQIYDEPEFDPQELQSEYYR
                     GLYAFDNRKNNVDSYKALHSWIPFIASFGTMMISAMLIFKGLKNLHLGMSNVNSFLTI
                     FMIGAAVWMGTFVFAKSLKRKDLGKSTFQMFSWMQVFTACGFAFSHGANDIANAIGPF
                     AAIMDVLRTNSVAAQSAVPPIAMLTFGIALIVGLWFVGKEVIKTVGTSLAEMHPASGF
                     TAELSAASVVMGASLMGLPVSSTHILVGAVLGIGLVNRNANWKLMKPIGLAWVITLPA
                     AAVLSMASYLILQAVF"
     gene            4028..4216
                     /locus_tag="ACFJAG_001144"
     CDS             4028..4216
                     /locus_tag="ACFJAG_001144"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980438.1"
                     /translation="MPSEPVFRRHFVDGMCGLVPYAQSVLSGYAVWYLGFGTVGHKGY
                     DMPPPVLENTYPRQQNAV"
     gene            complement(4254..5675)
                     /gene="hemN"
                     /locus_tag="ACFJAG_001145"
     CDS             complement(4254..5675)
                     /gene="hemN"
                     /locus_tag="ACFJAG_001145"
                     /EC_number="1.3.98.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003684340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004109 - coproporphyrinogen oxidase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HFC3980439.1"
                     /translation="MKIIQIQNNHNVNDDRPEFDRALIASLPASGPRYTSYPTADRFH
                     DGFREGEYIKVLHLRGMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADTYIE
                     YLEKEMELLAPHLNGRHQLAQLHFGGGTPTFLSDEQIQRVFRMIRKHFELIPSGEYSI
                     EIDPRKVSRDTVLMLGRLGFNRMSVGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAG
                     FKSVSVDLIYGLPHQTSESIKTTIDTVLSLDPDRLALYHYAHLPHVFKPQRRIDTAAV
                     PDSEEKLDMLQYCVQTLTERGYVFIGMDHFAKPDDELSIALKEGFLQRNFQGYSTYAD
                     CDLVAIGVSSIGKIGSTYSQNERDIDAYYAAIDEGRLPIMRGYQLNQDDILRRNIIQD
                     LMCRFALDYRIYESMFGIPFDRYFKDELADLEKLAGLGLVRLNSHGLTVTPKGRFLIR
                     NIAMVFDYHLRHKETKAKYSQTV"
     gene            5810..6544
                     /gene="fnr"
                     /locus_tag="ACFJAG_001146"
     CDS             5810..6544
                     /gene="fnr"
                     /locus_tag="ACFJAG_001146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate/nitrate reduction transcriptional
                     regulator Fnr"
                     /protein_id="HFC3980440.1"
                     /translation="MASHNTTHQMKTLCSSCSLRELCLPVGLLPNEFSQLDAVIRQSR
                     RLKKGEYLFRAGGAFTSLFAIRSGFFKTTVASQDGRDQVTGFFMSGELIGMDGICSYV
                     HSCDAVALENSEVCELPFTHIEELGQNIPSLRTHFFRMISREIVRDQGVMLLLGNMRA
                     EERIAAFLLNLSQRLYSRGFAANDFILRMSREEIGSYLGLKLETVSRTLSKFHQEGLI
                     SVEHKHIKILNLQVLKKMVSGCSHAI"
     gene            complement(6657..7607)
                     /locus_tag="ACFJAG_001147"
     CDS             complement(6657..7607)
                     /locus_tag="ACFJAG_001147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CysB family HTH-type transcriptional regulator"
                     /protein_id="HFC3980441.1"
                     /translation="MKLQQLKYALEVYRHNLNVSEAAEALFTSQPGISKQIKLLEEEI
                     GIQIFIRSGKRVVSVSQPGKVVLDIAERILRDVQNIKNIGSEFTGQDSGSLTVATTHT
                     QARYALPLIVADFVKRYPKVNLTIKQGSPAAIAQMVTSGESDLAIVTERIDDHPELGR
                     LSCYDWTHAVIVPNDHPLLECRNPLRIEDLARFPLITYEFAFNAGSSIARAFAKARLE
                     RPDVALAAADTDVLKTYVRLGLGVGLMAKMAYNPDTDGDLQLVDAAHLFEPSPTWIAL
                     RSDTYLRGYAYDFIQAFAPHLTREKVDRILYTPISEDFSI"
     gene            7971..8681
                     /gene="rmpM"
                     /locus_tag="ACFJAG_001148"
     CDS             7971..8681
                     /gene="rmpM"
                     /locus_tag="ACFJAG_001148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding outer membrane protein
                     RmpM"
                     /protein_id="HFC3980442.1"
                     /translation="MTKQLKLSALFVALLASGTAVAGEASVQGYTVSGQSNEIVRNNY
                     GECWKNAYFDKASQGRVECGDAVAVPEPEPAPVAVVEQAPQYVDETISLSAKTLFGFD
                     KDSLRAEAQDNLKVLAQRLSRTNVQSVRVEGHTDFMGSEKYNQALSERRAYVVANNLV
                     SNGVPASRISAVGLGESQAQMTQVCQAEVAKLGAKASKAKKREALIACIEPDRRVDVK
                     IRSIVTRQVVPARNHHQH"
     gene            9456..10412
                     /gene="thiL"
                     /locus_tag="ACFJAG_001149"
     CDS             9456..10412
                     /gene="thiL"
                     /locus_tag="ACFJAG_001149"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009030 - thiamine-phosphate kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HFC3980443.1"
                     /translation="MKEFDFIKRYLQTGTDKDVVLGIGDDAAIVRPREGFDLCFSADM
                     LLKDRHFFADVKPEGLAWKVLAVNISDMAAMGAIPRWVLLSAALPELDEVWLERFCGS
                     FFGLAKKFGVTLIGGDTTKGDMAFNVTIIGELPKGRALRRDAAVAGDDIWVSGRVGMA
                     AAALNCRLKRCVLPDDVFAECEQKLLRPEPRVGLGLALLPFARAAQDVSDGLAQDLGH
                     ILTASGVGAEIWADSLPSLSVLKDILPRAQWLSYTLAGGDDYELVFTAPESCRSRVLD
                     AAERCGVPVTCIGKINGGCRLKVLDAGGRELELHSLGFDHFG"
     gene            10405..10890
                     /locus_tag="ACFJAG_001150"
     CDS             10405..10890
                     /locus_tag="ACFJAG_001150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HFC3980444.1"
                     /translation="MADFKPDFAWLLKRPLCFLAFGFGSGLAPFAPGAFGTLAALPLA
                     FVLILLGIDGLLLAFVCIVLFMWGIRICACAERETGVSDHGGIVWDEIVAMLFVLAFV
                     PFRWTWWLAAFVLFRLFDALKPPPVGWFDKNLHGGLGIMADDMAAAVMTLIVLRIAML
                     F"
     gene            complement(10950..12626)
                     /gene="ettA"
                     /locus_tag="ACFJAG_001151"
     CDS             complement(10950..12626)
                     /gene="ettA"
                     /locus_tag="ACFJAG_001151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0045900 - negative regulation of
                     translational elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HFC3980445.1"
                     /translation="MSQQYVYSMLRVSKVVPPQKTIIKDISLSFFPGAKIGLLGLNGT
                     GKSTVLRIMAGVDKEFEGEAVPMGGIKIGYLPQEPELDPEKTVREEVESGLGEVAAAQ
                     KRLEEVYAEYANPDADFDALAEEQGRLEAIIAAGSSTGGGAEHELEIAADALRLPDWD
                     AKIGNLSGGEKRRVALCKLLLSKPDMLLLDEPTNHLDAESVEWLEQFLVRFPGTVVAV
                     THDRYFLDNAAEWILELDRGHGIPWKGNYSSWLEQKEKRLENEAKSEAARVKAMKQEL
                     EWVRQNAKGRQAKPKARLARFEEMSNYEYQKRNETQEIFIPVAERLGNEVIEFVNVSK
                     SFGDKVLIDGLSFKVPAGAIVGIIGPNGAGKSTLFKMIAGKEQPDSGEVKIGQTVKMS
                     LIDQSREGLQNDKTVFDNIAEGRDILQVGQFEIPARQYLGRFNFKGSDQSKIARQLSG
                     GERGRLHLAKTLLGGGNVLLLDEPSNDLDVETLRALEDALLEFAGSVMVISHDRWFLD
                     RIATHILACEGDSKWVFFDGNYQEYEADKKRRLGEEGAKPKRIKYKPVTR"
     gene            12862..14216
                     /locus_tag="ACFJAG_001152"
                     /pseudo
     CDS             12862..14216
                     /locus_tag="ACFJAG_001152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227015.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SLC45 family MFS transporter"
     gene            14220..15181
                     /locus_tag="ACFJAG_001153"
                     /pseudo
     CDS             14220..15181
                     /locus_tag="ACFJAG_001153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815867.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="galactose mutarotase"
     gene            15364..17622
                     /locus_tag="ACFJAG_001154"
                     /pseudo
     CDS             15364..17622
                     /locus_tag="ACFJAG_001154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234550.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 65 protein"
     gene            17635..18277
                     /gene="pgmB"
                     /locus_tag="ACFJAG_001155"
                     /pseudo
     CDS             17635..18277
                     /gene="pgmB"
                     /locus_tag="ACFJAG_001155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212463.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008801 - beta-phosphoglucomutase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="beta-phosphoglucomutase"
     gene            18417..>18554
                     /locus_tag="ACFJAG_001156"
     CDS             18417..>18554
                     /locus_tag="ACFJAG_001156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HFC3980446.1"
                     /translation="MSTFFRQTAQAMTAKHIGRFPLSELDQVIDWQPIEQYLNRQKTR
                     YL"
BASE COUNT         3979 a         4795 c         5251 g         4529 t
ORIGIN      
        1 tttttaccgt tgttttgttt gaagtcggga cggttttggg cggttgtgtc gccgtagggg
       61 gtgatgtcgg agaaatcgac catcaggcgg tctgaggctt tgacggtttt gccgacgctg
      121 taaggtccca tccagagggc gtattgttct tggtattggg attcgtaggc ggcggtttta
      181 ggggcaatca gcagtttccg gctgtcgcgg tcgacggcga aatattcgag cttggtttgg
      241 gctttaaggg tttcggcgtt gtagaggtgc agttcggtac ggctgcggac ggtgccgaat
      301 acgtcgacgg ttacgaatac gtcggtgtcg gcgtattcgg gcggtacgac ttcgatgccg
      361 cgcaggtaga agacggtttg gatgaggttg gtcaggaagg aaacgtcgcg ggggttggcg
      421 agcagggttt cgttgcggta gtcgcccgtg ccgttgacgg acagtccggc ggagcgttcg
      481 cctttgcgtc cgttgttttt cgtcagggcg gcggcggggg cgtttaagac cgatgtggaa
      541 gtggttacgc cggagagcgc gtcggatttg gtggtggcgg tagtgtcata ggcggggtag
      601 ctgtatcggg tggcgctgtc ggggttgttg tggtagccgc cgcgtatcag tgcgtcgatg
      661 gagtagcgtc cgccgcttat gttgcccgaa ccttggtcgc ccataacgga gacgtaaagg
      721 gcggctttgc gtcctttcag ggcggacaag tccatttctt tgacggcggc gcgggacgat
      781 gcggcgacga gttcttgttc gacggcaaag cgtttgccgc cgccgtgggc gggtatgccg
      841 gtcagtgtgc cgcaggcggt gagtacgagg gggatgagga ggagcagggt tttcatggca
      901 gggtttgttt tgttttgaac gggtttgagt gtaaatggat tttaagggtt tgtaaacaaa
      961 aggggcgaaa atgccgtctg agcggcggaa atggctttca gacggtattt gcgctcaata
     1021 ataatatccc gcgcccagaa tacacggttt ggatgcgccg gtcgctttgt gcggactacc
     1081 gggaatgcgg ttaatccaac acgccgccaa ccacgcaaat gcggccgcct ccacccattg
     1141 aggatcgagg ttcagttcgg cggtgctgtg cagggaaacg cgtgtgccga aacattctgc
     1201 caaatccgcc attaaaacag gattgcggat gccgccgccg caaatgtaca tttgacgggc
     1261 atctgccgct gcgtgtgaga cggcgtcgca aacggtttgc gcggtgaatc gggaaagcgt
     1321 ccgcaatacg tcgtatcggt tttcgccgcc gtcaaggtag gtttcgagcc aatttagggc
     1381 aaacagttcg cgccccgtgc tttttgggtg gggttgtgag aaatacgggt gggcgagcag
     1441 cctgccgagc agttgcggca atatgttgcc ttgtgccgcc tttgcaccgt ttttgtcgta
     1501 aggcagctgc cagtgtgcct gcgtccacgc gtccatcagc atattgcccg gccctgtgtc
     1561 gaagccgaag gcgggtgcgc cgggggggag tacgctgatg ttggcaatcc cgccgatgtt
     1621 cagtaccacg cgtgtttccc tgtcatcgcg gaacagggct tcgtgaaagg cggggacgag
     1681 cggcgcacct tgtccgccgg cggcaaggtc gcggctgcgg aagtcgccga cggtaaaaat
     1741 ccgcgtcagt tccgccagca gcggcaaatc ggcaagctgt atgctgtaac cgtgttccgg
     1801 cgcgtgtcgg acggtttgcc cgtggcagcc gagggcggta atgtcgcacg gagcgaggtt
     1861 ttgactgcac agcagttcgg cggcggtttg cgcgtacagg cggctgagtt cttgcgacaa
     1921 catcctgctg cggtgcagtt cgtctgtgcc tgtgtcctgc aaatccagca atttgcggcg
     1981 caaccggtca gggtaggggg taaaggcgtg cccttccgcg cccagccatt tgccgccgtc
     2041 catccgtacc agcacggcat ccgccccgtc catactggtt cccgacataa tgccgatgta
     2101 aagctgtgtt tccatcatca ctcccaaact ggtgcaaaac gccattttaa cgtgtattga
     2161 cgctcgtata ccgatttgcc gccgcagtgt aaataaagtg taaataaatg ttttaagacg
     2221 ggtggaaaaa tattataatg cgcccgcaac atccagtagt agaagtgtca tacaaaccgt
     2281 ttccggcagc agttttgcat tcggtcaggt ttgggggtat tcggatgcgg ttcagaagga
     2341 aggatgcgtc tgccatatcc cgaaacggca gttcgaccgg aggcagcaat acagtgtcgg
     2401 caacactcat gatttccacc acattaaagg aagattgcca tggctcaaat ccaaatgagc
     2461 gcaaatgtta aaaccatcaa cgccgtcttt gccgccatgc tggtaggtac agtcggctat
     2521 tttatttatt ggggcttggg ttatacccat tacaattacg ccgccttatt cattattgcc
     2581 acgatgttcg gtgtgtttat ggcgttcaac atcggcggca acgatgttgc caattctttc
     2641 ggcaccagcg tcggtgcagg cacgctgacc atcccgcagg ctttgctgat tgcggcggta
     2701 tttgaggtca gcggcgcggt catcgcgggc ggcgaggtaa ccgataccat acgcaaaggc
     2761 atcgtcgatt tgaagggtgt tgatttcgaa cccatacagt ttgtgtttat tatgatgtcc
     2821 gcgcttttgg cggcggcgtt gtggctgctg ttcgcgtccc gcaaaggtct gccggtttcg
     2881 acgacgcacg cgattatcgg cggcatcgtc ggcagtgcgt tgtgtatggc gtttacgcat
     2941 aatgcggacg gggtggcgtt gatacggtgg ggcaagctgg gcgaaatcgg gatgtcttgg
     3001 gtattgtcgc ccgtgttggg cggcgcggtg tcctatttcc tgttttcgcg cgtcaagaaa
     3061 aacgtcttag attacaacgc ttgggcggaa ggaacgctca agggcatcaa gcaggaaaaa
     3121 aaggcctata aagaacggca ccgcctgttt ttcgagggtt tgtccgaagc cgaaaaagtc
     3181 gagtacgcca ccaaaatggc gcacgacgcg caaatttacg acgaacccga attcgatcct
     3241 caagagctgc aatcggagta ttaccgcggt ctttatgcgt tcgacaaccg taaaaacaat
     3301 gtcgattcct acaaggcgct gcattcttgg attcccttta tcgcttcgtt cggcacgatg
     3361 atgatttccg ctatgctgat tttcaagggc ttgaaaaacc tgcatttggg gatgagcaac
     3421 gtcaacagct tcctgaccat ctttatgata ggcgcggcgg tgtggatggg gacgtttgtg
     3481 tttgccaaaa gcctcaagcg taaagacttg ggcaaatcga cctttcagat gttttcatgg
     3541 atgcaggtct ttaccgcctg cggcttcgca ttcagccacg gtgcgaacga tatcgccaac
     3601 gccatcggcc cgtttgccgc gattatggat gttttgcgga cgaacagcgt tgccgcgcaa
     3661 agcgccgtcc ctccgattgc gatgctgact ttcggcatcg cgctgattgt cggtttgtgg
     3721 tttgtcggta aagaggtgat taaaaccgtc ggtacgagtt tggcggaaat gcatcctgct
     3781 tcgggtttta ccgccgaact gtccgccgca tccgtcgtga tgggcgcgtc gctgatgggg
     3841 ctgcccgtgt ccagtacgca tatcttggtc ggcgcggtac tcggtatcgg tctggtcaac
     3901 cgcaatgcca actggaaact gatgaaaccc atcggtttgg cgtgggtcat taccctgcct
     3961 gccgccgctg tattgtcgat ggccagctat ttgattttgc aggcagtgtt ctgattgtaa
     4021 aatactgatg ccgtctgaac ccgtgttcag acggcatttt gttgatggaa tgtgcgggct
     4081 tgtgccttat gcacaatctg ttctgtcggg atatgctgtt tggtatcttg gtttcggaac
     4141 ggtcggacac aaaggttatg atatgccgcc gcctgttctt gaaaacactt atcctcggca
     4201 gcaaaatgcc gtctgaaaaa gcctttcaga cggcttttgt acgttagccg caatcacacc
     4261 gtttgcgaat atttcgcttt ggtttctttg tggcgcaggt ggtagtcgaa gaccatggcg
     4321 atgttgcgga tgaggaagcg tcctttcggt gtaacggtca gcccgtggct gttcaggcgc
     4381 accaatccca aaccggcgag tttttccaaa tccgccagtt cgtctttgaa gtagcggtcg
     4441 aacgggatgc cgaacatact ttcgtaaatc ctgtagtcga gcgcgaagcg gcacattaaa
     4501 tcctgaatga tgttgcggcg caggatgtcg tcctgattga gctggtagcc gcgcatgatg
     4561 ggcagtctgc cttcgtcgat ggcggcatag taggcatcga tgtcgcgttc gttttgggaa
     4621 taggtgctgc cgattttgcc gatggacgac acgccgatgg cgaccaaatc gcaatccgcg
     4681 taggtcgaat agccttggaa gttgcgttgg aggaagcctt ctttgagggc gatggagagt
     4741 tcgtcgtcag gtttggcgaa atggtccatg ccgatgaaga cgtagccgcg ctctgtcagg
     4801 gtttggacgc agtattgcag catatcgagc ttctcttcgc tgtcggggac ggcggcggta
     4861 tcgatgcggc gttgcggttt gaacacgtgc ggcaggtggg cgtagtggta aagggcgagg
     4921 cggtcgggat cgagcgacaa aacggtatct atggtggttt tgatgctttc ggaagtctga
     4981 tgcggcaagc cgtaaatcaa atcgacgctg acggatttga accctgcctc acgggcggca
     5041 tcgatgactt ctttggtttc ttcgtagctt tggatgcggt tgactgccgc ctgcactttg
     5101 gggtcgaaat cctgaatgcc gacgctcatg cggttgaagc cgagtctgcc gagcatgagg
     5161 acggtgtcgc ggctgacttt gcgcgggtcg atttcgatgg aatattcgcc ggacggtatc
     5221 agttcgaaat gtttgcggat catgcggaag acacgttgga tctgttcgtc gctcaaaaag
     5281 gtcggcgtgc cgccgccgaa gtgcagttgg gcaagctggt gccgtccgtt cagatgtgga
     5341 gcgagcagtt ccatttcttt ttcaagatat tcgatgtagg tatcggcgcg gcttttgtct
     5401 ttggtgatga ttttgttgca gccgcagtag tagcagatgg tgttgcaaaa cggaatgtga
     5461 atgtaaaggg aaagcggttt gtttaacgcg cccataccgc gcaaatgtaa aactttgata
     5521 tattcgcctt cgcggaaacc gtcatggaaa cggtcggcgg tagggtagga agtatagcgc
     5581 gggccgctgg cgggcaggct ggcaatcagc gcgcggtcaa actcggggcg gtcatcgttt
     5641 acattgtgat tgttctgtat ctgaatgatt ttcatggtgt gtgtgcggtt ttatgatgtt
     5701 agtcaaattt tggatagttt ggtagaatgc cacagtatga taaacctgtc ttgatatgtg
     5761 tcaacaagca cataatcggg atggggcaaa acacacgaaa aggtacggta tggcttcgca
     5821 taatactaca catcagatga aaacgctgtg ttcttcctgt tctttgcggg aactctgcct
     5881 gcctgtcggg ctgctgccca acgagttcag ccaactcgat gccgtcatcc gccaaagccg
     5941 ccgcctgaaa aaaggcgaat acctgttccg tgccggcgga gcctttacct cgctctttgc
     6001 catccgttcg ggcttcttca aaacaaccgt cgccagtcag gacggccgcg atcaggtaac
     6061 gggtttcttt atgtcgggcg aactcatcgg catggacggc atctgttcct atgtgcacag
     6121 ttgcgacgcg gtcgccttgg aaaacagcga ggtatgcgag ttgccgttta cccatatcga
     6181 agagctcggt cagaatatcc ccagcctgcg tacacacttt ttccgcatga taagccgcga
     6241 aattgtgcgc gatcaaggtg ttatgctgtt gttgggcaat atgcgcgccg aagagcggat
     6301 tgccgccttc ctgttgaacc tttcccaacg cctttattcc cgaggtttcg ccgccaacga
     6361 cttcatctta agaatgtccc gcgaagaaat cggcagttat ctcgggctga aacttgaaac
     6421 cgtcagccgc acattatcca agttccatca ggaaggattg atttccgtcg aacacaaaca
     6481 catcaagatt ctcaatctgc aggtgctgaa aaaaatggta tccggttgtt cgcacgccat
     6541 ttgattaacc tgtacgaaca tttcagacgg cattctcaat aaacacaggg cagacgaaaa
     6601 catctgccct gtttgttgta tctgccgcaa agtgccgcct gaaaaccggc agccgcctaa
     6661 atcgaaaaat cctcgctgat gggcgtgtac agaatcctat ccaccttctc gcgtgtcagg
     6721 tgcggcgcaa acgcttggat aaagtcgtag gcatatccgc gcaaataagt atcgctgcgc
     6781 aaagctatcc acgtcggcga cggctcgaac aggtgtgccg catccacaag ctgcaaatcg
     6841 ccgtccgtat ccgggttgta tgccattttc gccatcagtc ccacgcccaa acccaagcgc
     6901 acataagtct tcaatacatc cgtatccgcc gccgccaatg cgacatccgg ccgttccaaa
     6961 cgggctttgg cgaatgcccg cgcgatgctg ctgcccgcat tgaatgcaaa ttcataagta
     7021 atcagcggaa acctcgccaa atcttcaata cggaggggat tcctgcattc gagcagcgga
     7081 tggtcgttcg gcacaatcac cgcgtgtgtc cagtcgtagc aggaaagcct tcccaactcg
     7141 gggtggtcgt ctatccgttc cgtaacaatc gccaaatcag attctcccga agtaaccatt
     7201 tgggcgatgg cggcagggct tccctgtttg atggtcagat tgactttcgg atagcgtttc
     7261 acaaaatcgg caacaatcaa cggtagggca tagcgcgcct gcgtatgcgt cgtggcaacc
     7321 gtcagcgaac cgctgtcctg tccggtaaac tcgctgccga tatttttaat gttctgtaca
     7381 tcgcgcaaaa tacgttccgc aatatccaaa accaccttgc ccggctgcga gaccgaaacc
     7441 acgcgcttgc cgctgcggat aaaaatctga atgccgattt cttcttccag caatttgatt
     7501 tgtttggaga tgccgggttg tgatgtgaat aaggcttcgg ccgcttcgga aacgttcagg
     7561 ttgtgccggt aaacttctaa ggcgtatttc aattgttgta atttcatggc gggtcggtgt
     7621 gggtctgtgt cgggtggctg aacattgttt ataatttatc atattttctt gccggtacgg
     7681 tatggggctt tgccgttgtg tttgttgttt ttgtgcaacg gcaatcgtgc gatatggaaa
     7741 aaatccccct aaagtaatga cacggaattg atttttcggc atgatagact atcaggaaac
     7801 aggctgtttt acggttgttt tcaggcgttg agtattgaca gtccgccccc tgtttcttta
     7861 tagtggagac tgaaatatcc gatttgccgc catgtttcta cagcggcctg tatgttggca
     7921 attcagcagt tgcttctgta tctgctgtac aaatctaatg agggaataaa atgaccaaac
     7981 agctgaaatt aagcgcatta ttcgttgcat tgctcgcttc cggcactgct gttgcgggcg
     8041 aggcgtccgt tcagggttac accgtaagcg gccagtcgaa cgaaatcgta cgcaacaact
     8101 atggagaatg ctggaaaaac gcctactttg ataaagcaag ccaaggtcgc gtagaatgcg
     8161 gcgatgcggt tgccgtcccc gagcccgaac ccgcgcctgt cgccgttgtg gagcaggctc
     8221 ctcaatatgt tgatgaaacc atttccctgt ctgccaaaac cctgttcggt ttcgataagg
     8281 attcattgcg cgccgaagct caagacaacc tgaaagtatt ggcgcaacgc ctgagtcgaa
     8341 ccaatgtcca atctgtccgc gtcgaaggcc ataccgactt tatgggttct gaaaaataca
     8401 atcaggctct gtccgaacgc cgcgcatacg tagtggcaaa caacctggtc agcaacggcg
     8461 tacctgcttc tagaatttct gctgtcggct tgggcgaatc tcaagcgcaa atgactcaag
     8521 tttgtcaagc cgaagttgcc aaactgggtg cgaaagcctc taaagccaaa aaacgtgagg
     8581 ctctgattgc atgtatcgaa cctgaccgcc gcgtagatgt gaaaatccgc agcatcgtaa
     8641 cccgtcaggt tgtgccggca cgcaatcatc accaacacta aggctaggta atatcttgcc
     8701 gatgcatgag gttagcggat tttgtaccgg gtactgttgc aatattcgtg aaacgtcggc
     8761 cggtatcgat gatgtgaaac aaaccccgct tttgcggggt ttgttttttt gggtggtttt
     8821 ctgaaacggc tatcgtcaga atcggggtgc aggttcggat tcggattcag attcatgttt
     8881 gtgtcccatt gccgcgcttt atagtggatt aacaaaaatc aggacaaggc gacgaagccg
     8941 cagacagtac aatagtacgg caaggcgagg caacgccgta ccggtttaaa tttaatccac
     9001 tatatcggtt gaaactctga ttttaaggcg gtaggatgtg ggtttgccca tagcaaggga
     9061 atcctttctg tatcaagccc cgaaagggat aattcataca aattcacgcc tttccccctc
     9121 attgggaaat ggatggaatc gtgcccgatg tgtgcggcac tgtatgccgg atatggtttt
     9181 atcatcatcc cttttcggtt gaaaccccgc cagttgcagc gattgagcct aatcggtggc
     9241 ggaagttgcc gctttgcatt cggggcggcg tgcagtgcgg tgctttgata tgccgtttgt
     9301 gtgttgaaac agggtggtcg gtgcatacgg gtacggtatg gctaaagcta aaagtgaaat
     9361 acgctgaaac actgaatgag ccgctttatt gtttgtacga cctttgctgc tttgctatga
     9421 tttaaattgg attcgcacgc cggatatttt gggatatgaa agaattcgac ttcatcaaac
     9481 ggtatttgca aacaggtacg gataaggatg tcgtattggg cataggcgac gatgcggcga
     9541 ttgtccgccc gcgcgaaggc ttcgatttgt gtttcagtgc ggatatgctt ttgaaggaca
     9601 ggcatttttt tgcagatgtc aaacctgaag gcttggcttg gaaggttttg gccgtcaata
     9661 tttcagatat ggcggcgatg ggtgcgatac cgcgttgggt gctgctgagc gcggcgttgc
     9721 ccgaattgga tgaagtatgg ctggaacggt tttgcggcag ctttttcggt ttggcaaaaa
     9781 agtttggcgt aacgttaatc ggcggcgata cgaccaaggg cgatatggcg ttcaatgtaa
     9841 ccattatcgg cgaattgccg aagggtaggg cgttgcggcg tgatgcggcg gttgcgggcg
     9901 acgatatttg ggtgtcgggg cgtgtcggta tggcggcggc ggctttgaac tgccgtctga
     9961 aacggtgtgt gctgccggat gatgtgttcg ccgaatgcga acaaaagctg ctccgtcccg
    10021 agccaagggt tgggctgggg cttgcgctgt tgccgtttgc ccgggcggca caggatgttt
    10081 cagacggcct tgcgcaagat ttggggcata tcctgaccgc ttccggcgtg ggggcggaaa
    10141 tttgggccga ttcgctgcca tctttatctg tattgaaaga tattttgccc cgagcgcaat
    10201 ggctgtctta tactttggcg ggcggcgacg attacgagct ggtttttacc gctccggaaa
    10261 gttgccgcag ccgcgtgctt gatgcggcgg aacggtgcgg cgtgccggta acgtgcatcg
    10321 gcaaaatcaa cggaggatgc cgtctgaagg ttttagatgc cggcggcagg gaattggaac
    10381 tacattcttt aggattcgat cattttggct gattttaaac ctgactttgc gtggctgttg
    10441 aaacggccgt tgtgtttttt ggctttcggt ttcggcagcg ggctggctcc gtttgcgccg
    10501 ggcgcattcg gcactttggc ggcactgcct ttggcgtttg tgctgatttt gctcggcata
    10561 gacgggctgc tgctggcttt tgtgtgtatc gtgctgttta tgtggggcat acgtatttgt
    10621 gcgtgtgcgg aacgtgaaac gggtgtcagc gaccacggtg ggattgtttg ggacgagatt
    10681 gtcgccatgc tgtttgtgct ggcgtttgtg ccgttcaggt ggacgtggtg gctggcggca
    10741 tttgttctgt tccgcctgtt tgatgcgctc aaaccgcccc ccgtcggttg gtttgacaag
    10801 aatctgcacg gcggtttggg cattatggcg gacgatatgg cggctgcggt gatgaccttg
    10861 attgtcttga ggattgcaat gctgttttaa acggggctgc cttgtaaaaa tgccgtctga
    10921 aagcctttca gacggcattg tttcggaggt taacgcgtta ccggtttgta tttgatgcgt
    10981 ttcggtttcg cgccttcttc gccgagtcgg cgtttcttgt cggcttcgta ttcttgatag
    11041 ttgccgtcga agaacaccca tttggagtcg ccttcacacg ccaagatatg cgtggctatg
    11101 cggtcgagaa accagcggtc gtgcgaaatc accatcacgc tgccggcaaa ttccaacaat
    11161 gcgtcttcca acgcgcgcag ggtttccacg tcgagatcgt tggacggttc gtccagcagc
    11221 aacacattgc cgccgcccaa caaggttttt gccaagtgca gacggccgcg ttcgccgccg
    11281 gaaagctgcc ttgcgatttt gctttggtcg ctgcctttaa agttgaagcg tcccaaatat
    11341 tggcgggcgg ggatttcaaa ctgtccgacc tgcaaaatat cgcgaccttc ggcaatgttg
    11401 tcgaacacgg ttttgtcgtt ttgcaaacct tcgcggcttt ggtcaatcaa gctcattttc
    11461 acggtttgcc cgattttcac ttcgcccgaa tcgggctgct ctttgcccgc aatcattttg
    11521 aacagcgtcg atttacccgc gccgttcggg ccgatgatgc cgacaatcgc gcccgccggc
    11581 actttgaagc tcaaaccgtc aatcagcact ttatcgccga acgatttgga aacattcaca
    11641 aattcaatca cttcgttacc caaacgctcg gcaacaggga taaagatttc ctgagtttcg
    11701 ttgcgttttt ggtattcgta gttgctcatt tcttcaaaac gcgccaaacg cgctttgggc
    11761 ttggcttggc ggcctttggc attttggcgc acccattcca attcctgctt catcgccttc
    11821 acgcgcgcgg cttcggattt cgcctcgttt tccaagcgtt tttctttctg ctccagccaa
    11881 gacgagtaat tgcctttcca cggaatgccg tgtccgcggt cgagctccaa aatccattcg
    11941 gcggcgttgt cgaggaagta gcggtcgtgc gttaccgcga ccactgtgcc ggggaagcgc
    12001 acgaggaatt gctccagcca ttccaccgat tccgcatcca agtggttggt cggctcgtcc
    12061 aagagcagca tatcgggctt gctcaacaaa agtttgcata aagcgacgcg gcgtttttca
    12121 ccgcccgaaa gattgccgat tttggcatcc caatcaggca ggcgcagcgc gtcggcagcg
    12181 atttccaatt cgtgttccgc accgccgcca gttgacgaac ccgccgcgat aatcgcttcc
    12241 aagcggcctt gttcttccgc cagcgcgtca aaatccgcat cgggattggc gtactcggca
    12301 tacacttctt ccaaacgttt ctgtgcggca gccacttcgc ccaaaccgct ttccacttcc
    12361 tcgcgcacgg ttttttccgg atcaagctcc ggctcttgcg gcagatagcc gattttgatg
    12421 ccgcccatcg gcacggcttc gccctcaaat tctttatcca cgcccgccat aatccgcagc
    12481 acggtggact tgcccgtgcc gttcaagccc aagaggccga ttttcgcgcc ggggaagaaa
    12541 gaaagggaaa tatctttaat gatggttttc tgcggcggca caaccttgct cacgcgcagc
    12601 atagaataga cgtattgttg ggacatagtt ttctcgattc ggtcaaacaa atttcagacg
    12661 gccattttaa ccgataattt gatttaagcc agtttatccg cgaaccggta ttgccaaaat
    12721 cgggcaggat tcataaaatc cgcctatccc tttgaaatta tacagacaaa aaaataataa
    12781 tgatagggga tcgccgcgcc ggcaaccatt tcggattttc caaagcaaat acttttcaaa
    12841 tcaaaaaaaa ggatttactt tatgtcggaa tatacgcctc aaacagcaaa acaaggtttg
    12901 cccgcgccgg caaaaagcac gatttggatg ttgagcttcg gctatctcgg cgttcagacg
    12961 gcctttaccc tgcaaagctc gcagatgagc cgcatttttc aaacgctagg cgcagacccg
    13021 cacaatttgg gctggttttt catcctgccg ccgctggcgg ggatgctggt tcagccgata
    13081 gtggctacta ctcagaccgc acttggaagc cgcgcttggg cggccgccgc ctgccgtatc
    13141 tgctttacgg cacgctgatt gcggtcatcg tgatgatttt gatgccgaac tcgggcagct
    13201 tcggtttcgg ctatgcgtcg ctggcggcct tgtcgttcgg cgcgctgatg attgcgctgt
    13261 tggacgtgtc gtcgaatatg gcgatgcagc cgtttaagat gatggtcggc gatatggtca
    13321 acgaggagca gaaaagctac gcctacggga ttcaaagttt cttagcgaat acggacgcgg
    13381 ttgtggcagc gattctgccg tttgtgttcg cgtatatcgg tttggcgaac actgccgaga
    13441 aaggcgttgt gccacaaacc gtggtcgtag cattctatgt gggtgcggcg ttactgatta
    13501 ttaccagtgc gttcacaatc tccaaagtca aagaatacga cccggaaacc tacgcccgtt
    13561 accacggcat cgatgtcgcc gcgaatcagg aaaaagccaa ctggttcgaa ctcttaaaaa
    13621 ccgcgcctaa agtgttttgg acggttactc cggtacagtt tttctgctgg ttcgccttcc
    13681 ggtatatgtg gacttactcg gcaggcgcga ttgcagaaaa cgtctggcac actaccgatg
    13741 cgtcttccgt aggccatcag gaggcgggca accggtacgg cgttttggcg gcggtgtagt
    13801 cggttgcggc ggtgatttgt tcgtttattc tggcaaaagt accgaataaa taccataagg
    13861 cgggttattt cggctgtttg gctttgggcg cgctcggttt cttctctatc ttcttcatct
    13921 acaatcaata cgcactcatc ctgtcttata tcttaatcgg catcgcttgg gcgggcatta
    13981 tcacttatcc gctgacgatt gtggccaacg ctttgtcggg caaacacatg gatacttatt
    14041 tgggcctgtt taacggctct gtctgtatgc cgcaaatcgt cgcttcgctg ttgagtttcg
    14101 tgcttttccc gatgctgggc ggccatcagg caaccatgtt cttggttgca ggcgcagtct
    14161 tgctgctggg agccttctca gtctgtctga ttaaagagac ccacggcggg gtttgagcga
    14221 tgagcgatac ccccgctacc cgcgatttcg gcctgatcga cgggcgggcc gtaaccggct
    14281 atgtgctgtc caaccggcgt ggtacgtgcg tcttcgtgct ggacttgggc gggattgtgc
    14341 aggaattttc cgttttggca gacggcgtgc gcgaaaaccc cgtggtgtcg ttcgacgatg
    14401 cggcttccta tgcggacaat ccgtttcaga ttaacaagca gatagggcgc gtggccggac
    14461 gcatccgcgg tgcggcgttc gacatcaacg gtaggactta ccgcgtggag gccaacgaag
    14521 gcaggaacgc gctgcacggc ggttcgcacg ggctggccgt tacccgtttc aacgcggtgg
    14581 cggcagacgg ccgacggtta tcccaacgat ttggatattt cctaccgctt ggacgaggac
    14641 ggccggctta ccgttaccta tcgcgccacc gcgctcggcg acacggtgtt cgacccgacg
    14701 ctgcacattt actggcggct ggacgcgggc ctgcacgatg cggttctgca tattccgcag
    14761 ggcggacata ttccggccga tgccgaaaaa ctgcccgtct taacggtttc agacggcctc
    14821 gaagtatttg atttcagccg gtccaagccg ccggatgccg ccgttgccgc cctgcgccgc
    14881 gaaacgggcc ggttttgacg acgcttaccg cgtgccgtcc gatataggcc gtcccgccgc
    14941 cgtgttgcaa gccggacgcc gccgtcgtat cagcatatac agcgaccgca acggcttggt
    15001 catctttacc gccgccccgc aggatttcgc gcggcacgat gcgggcgttt acgacgcgct
    15061 ggcgaccgag gcgcagacgc tgcccgacag cctgcattgg cccgaattcg gcaatatccg
    15121 tctgaacaag ggtgatacta gggaggcgac gattgcttac ggcatcgaat ccctttctta
    15181 ggagcttcct aacaccggtt tcagacgacc tttttatagt ggattaacaa aaaccagtac
    15241 ggcgttgcct cgccttgccg tactatctgt actgtctgcg gcttcgtcgc cttgtcctga
    15301 tttttgttaa tccactataa gatttcacca ttccctcaaa tcaatccaaa caggagcttt
    15361 acgatgtaca caagaattat ggaaatcagc ccttggacgc tgcgttcggc aaaactggaa
    15421 aaagaacaca aacggctgca agagagcctg accagcttgg gcaacggcta tatgggtatg
    15481 cgcggcagct ttgaggaaac ctactccgcc gacagccact tgggcaccta catcgccggc
    15541 gtgtggtttc ccgacaaaac ccgcgtcggc tggtggaaaa acggctatcc caaatatttc
    15601 ggcaaagcca tcaacgcgct caatttcagc aaagtcaaaa tctttgtcga cgggcaagag
    15661 gtggacttgg cgaaaaacga cgttgccggc ttctccgtcg aactggatat gcaacacggc
    15721 gtgttgcgcc gctcgttcac cgtattcggt gtgcgtttcg atgtgtgcaa attcctgtcg
    15781 gtcgcgcaaa aagagctggc tctcacccgc tgggaagccg tgtccgttga cggcaaaacc
    15841 caccaagtcc gcatcgattc catcatcgat gccgacgtga aaaacgaaga ctccaactac
    15901 gaagaaaaat tctggcaggt attggacaaa ggcgtttcag acgaccgatc ctacattgcc
    15961 gcccaaaccg tcgccaaccc tttcggtgtg gaacaattta tcgtcaacgc cgggcaaacc
    16021 ttcgtcggca gcttcaaagc cttcggcggc agccaaaccg attggcaggt ctctaattct
    16081 tttgaagccg aagtcggcgg cacgcccgaa acctttgaaa aacgcgtgat tgttaccacc
    16141 agccgcgatt atcagggctt ggaagcagtg aaagccgccg gccgcgcctt atctgaaaaa
    16201 atcgcaggtg ttgcgtttga aaccttgctg gatgcgcaca aagcaggctg gcagcatcgt
    16261 tgggaaatcg ccgacgtggt catcgaaggc agcgacgaag cacagcaggg catccgcttc
    16321 aacctgttcc aactgttctc cacctactac ggcgaagacg cgcgtctgaa catcggcccc
    16381 aaaggcttta ccggcgaaaa atacggcggc gcgacctatt gggacaccga agcctacgcc
    16441 gtgccgctct accttgcact ggcggaaccc gaagttaccc gcaacctgct gcaataccgc
    16501 cgcaaccaaa ttgccgcagg tgcagcataa cgcacgcgaa cagggcttgg cgggcgcact
    16561 ctgtccgatg gtaacgttta cgggcatcga gtgccacaac gaatgggaaa tcaccttcga
    16621 ggaaatccac cgtaacggcg cgattcctta cgccatctac aactacacca actacaccgg
    16681 tgacgagtgc tatcttgcca aagaaggctt ggaagtcttg gtcgaagtgt cccgcttccg
    16741 ggcggaccgc gtccacttct ccaaacgcaa cggcaaatac atgattcaag gcgtaaccgg
    16801 tccgaacgaa tacgaaaaca acatcaacaa caactggtaa accaacaccc tcgccgcatg
    16861 ggtattggac tacacccgcg aagccttggc gaaatacccg cgtccgggtt cgaacgtgag
    16921 cgccgccgag ttggaaaaat gggcggacat cagcgcgaat atgtaccgtc cgcatgacga
    16981 agaactcggc gtattcgtgc agcacgacgg cttccttgac aaagacatcc gccccgtatc
    17041 cgcgctttcg cccgacgatt tgccgctcaa ccagaaatgg tcgtgggaca aaatcctgcg
    17101 ttcgcccttc atcaaacagg cggacgtatt gcaaggcatc tacttcttcg gcgaccgttt
    17161 cgacatggac gaaaaacgcc gcaacttcga cttctacgaa ccgatgaccg tgcatgaaag
    17221 ctcgttgtct ccatgtatcc actccatcct cgctgccgaa ctgggcaaag aagaaaaagc
    17281 cgtggaaatg taccggcgca ccgcccgcct ggacttggac gactacaaca acgacaccga
    17341 agacggcctg catattactt ctatgaccgg ctcgtggctc gccatcgtcc aaggtttcgc
    17401 ccaaatgaaa acttggggcg gcaaactcag cttcgcaccg ttcctgccga gtgcgtggac
    17461 aggctatgcc ttccacatca actaccgcgg ccgtctgatt aaagtcgccg tcggcaaaaa
    17521 aacgtcgtct tcaccctgct caaaggcgat ccgctcgaat tgcaggtgta cggcaaagac
    17581 atcacgctca acggcagcca caccgttgca ttggaaaaat aaggagggcg caaaatgact
    17641 tttaccgcag tgctcttcga tctcgacggc gtgattaccg ataccgccga ataccactac
    17701 ctcgcatgga aaaagcttgc cgaagaattg ggcatcggca tcgaccgcaa gtttaacgag
    17761 cagctcaaag gcgtgtcgcg cgacgattcg ctcaaacgca tcctcgcgca cggcggcaaa
    17821 accgtcggcg aaaccgagtt cgccgaactg acctgccgca aaaacgacaa ctacttagag
    17881 atgattcagg cagtcaaacc cgaagacgtg taccccggca ttttgccgct gctggaagca
    17941 ttgagggcaa acggcaaaaa aatcgccctc gcgtccgcca gtaaaaacgg cccgttcttg
    18001 ctcgaacgca tggggctgac ccacttcttc gacaccgtcg ccgaccctgc cgccgtcgcg
    18061 cattccaaac cctcccccga catcttcctt gccgccgccg agggcgtggg tgcggacata
    18121 cgccgctgcc ggcgtcgccg ccatcaaagc ctctggcgct ttgcccatcg gcgtgggcaa
    18181 aaccgaagac ttgggcagcg acatcgcgct ggtgtccgac accgccgagc tgacctacgc
    18241 ctacttgcaa aatgtgtggg aacagtcggg cagataaaat tctaaggaag taaaaaggcc
    18301 gtctgaacag tgtttcagac ggcctttctg cttttagaac agaatgataa cccgagacct
    18361 ttgcaaaaat ccccaaaatc ccctaaattc ccaccaaggc atttagggga tttcccatga
    18421 gcaccttctt ccggcaaacc gcccaagcca tgactgccaa acacatcggc cgcttcccgc
    18481 tatcggagtt ggaccaggtg attgattggc agccgatcga acaatacctg aaccgtcaaa
    18541 aaacccgtta cctc
//
LOCUS       DAXFZM010000041        18508 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.041, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000041 DAXFZM010000000
VERSION     DAXFZM010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 18508)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18508)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18508
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.041"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(126..1547)
                     /locus_tag="ACFJAG_001157"
     CDS             complement(126..1547)
                     /locus_tag="ACFJAG_001157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HFC3980447.1"
                     /translation="MRHLPLFSLMLFPASVYAADSDGANLNLLWGLPFALILLSIALG
                     PLFFSHTWHHHYGKITAFWTLLFLIPFSLVFGASAGIHTVAHALVEEYIPFILLLLAL
                     YTISGGILVWGDLNGTPKLNTALLAVGTALASIMGTTGAAMLMIRPLLKANQDRTRRV
                     HIVIFFIFLVANIGGGLTPLGDPPLFLGFLKGVDFMWTVKHMFAPVLISTAVLLTAFY
                     FIDNRFFKQESIAQDTPAQQEKPEKIAIFGKWNFLLLSGVVGAVLMSGLWKPEHPGFE
                     ILGSRYALQNLVRDVILITLTAVSMAITPKQVRAGNEFNFEPIAEVGKLFLGIFITIF
                     PVLSILKAGEAGALGGVVSLVHDTAGHPINTMYFWMSGILSAFLDNAPTYLVFFNMAG
                     GDAQALMTGPLFHSLLAVSMGSVFMGALTYIGNAPNFMVKAIAEQRGVPMPTFFGYMM
                     WSVAFLTPVFIVHTLVFFVFKLL"
     gene            complement(1906..2265)
                     /locus_tag="ACFJAG_001158"
     CDS             complement(1906..2265)
                     /locus_tag="ACFJAG_001158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaN family protein"
                     /protein_id="HFC3980448.1"
                     /translation="MIRYLLIACGGISLLLGIIGIFLPLLPTTPFVLLSAACWAKASP
                     RFHRWLHRHRYFGPMVHNWEQNGAVPRKAKIFAISMMTASCLMMFWQFPQRWWVGAVS
                     SVFCSLVAIWMWRRPES"
     gene            complement(2262..2867)
                     /locus_tag="ACFJAG_001159"
     CDS             complement(2262..2867)
                     /locus_tag="ACFJAG_001159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1415 family protein"
                     /protein_id="HFC3980449.1"
                     /translation="MTIMNIDTSENKDAVAEHTGQWLEKAVIGLNLCPFAKAPHVKNL
                     VRIAISEAKHLDGFLEDLDEELQRLGNTPATELETTLLVHPTLFPDFDVFNDMLDIAD
                     AAVVENGLEGIVQIAPFHPYFQFEGTDSDGIGNYTNRSPYPTLHLIREDSIAKAAQAF
                     PDASAIFERNIALLEKMGHEGWAKLGITSCPYPHNKKNISK"
     gene            complement(2914..3396)
                     /locus_tag="ACFJAG_001160"
     CDS             complement(2914..3396)
                     /locus_tag="ACFJAG_001160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HFC3980450.1"
                     /translation="MPQLTLDKTDIKILQVLQENGRLTNVELSERVALSPSPCLRRLK
                     QLEDAGIVRQYAALLSPESVNLGLQAFIRVSIRKAKDAREDFAASVRKWPEVLSCFAL
                     TGETDYLLQAFFTDMNAFSHFVLDTLLSHHGVQDAQSSFVLKEIKHTTSLPLNHLLKE
                     "
     regulatory      3600..3697
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00504"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="glycine riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="glycine"
                     /db_xref="RFAM:RF00504"
     gene            3908..5008
                     /gene="gcvT"
                     /locus_tag="ACFJAG_001161"
     CDS             3908..5008
                     /gene="gcvT"
                     /locus_tag="ACFJAG_001161"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004047 - aminomethyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HFC3980451.1"
                     /translation="MTALKTTPFHQAHQDAGAKPVDFAGWELPIHYGSQIAEHEAVRT
                     DAGMFDVSHMLVTDVVGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLI
                     VYRTNEAETQYRIVSNGATREKDTAQFHKVGQEFGVAFNPRYDLGMLAVQGPKAIEKL
                     LTVKPEWADVIHGLKPFQGADLGNDWFVARTGYTGEDGVEVILPDTEAVAFFKVLQTA
                     GVQPCGLGARDTLRMEAGMNLYGNDMDDDTSPLEAGMGRTVDLKDESRDFVGKAALLA
                     LKEKGVAVKQVGLLLEKGGILRAHMEVLTDKGKGETTSGVFSPSLKQSIAIARVPKDF
                     DGDTAKVLIRGKEADVRVLKLPFVRSGQKQFD"
     gene            5155..5694
                     /locus_tag="ACFJAG_001162"
     CDS             5155..5694
                     /locus_tag="ACFJAG_001162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980452.1"
                     /translation="MFFDTEGKSHTAIFMKIVGGNGKIAGEVVIDGEYALDIVRMNDD
                     LSIAVQDNKGRSRASDLEALSQAKSFTLIAFSRYAGTVEVDKVSAVTGICADYRSKGL
                     KVAVADNMRPKQEIVVFRASGVMASNKRKINEAYLDYSASSKLPSAQKQELEQDKNNM
                     IAVHYGRLEELIARGICVR"
     gene            5746..6132
                     /gene="gcvH"
                     /locus_tag="ACFJAG_001163"
     CDS             5746..6132
                     /gene="gcvH"
                     /locus_tag="ACFJAG_001163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005960 - glycine cleavage complex
                     [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HFC3980453.1"
                     /translation="MSNNIPTELKYVASHEWLRLEEDGIITVGITHHAQELLGDIVFV
                     ELPEVGANLAAEEQSGVVESVKAASDVYAPIAGEVVAVNDDLPGAPETANSDPYGAGW
                     FFKIKPANPADYDGLLTAEQYAGEVD"
     gene            6285..7532
                     /gene="hemA"
                     /locus_tag="ACFJAG_001164"
     CDS             6285..7532
                     /gene="hemA"
                     /locus_tag="ACFJAG_001164"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008883 - glutamyl-tRNA reductase activity
                     [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HFC3980454.1"
                     /translation="MQLTAVGLNHQTAPLSIREKLAFAAAALPEAVRNLARSNAATEA
                     VILSTCNRTELYCVGDSEEIIRWLADYHSLPIEEIRPYLYTLDMQETVRHAFRVACGL
                     DSMVLGEPQILGQIKDAVRAAQEQESMGAKLNALFQKTFSVAKEVRTDTAVGENSVSM
                     ASASVKLAEQIFPDIGDLNVLFIGAGEMIELVATYFAAKNPRLMTVANRTLARAQELC
                     DKLGVNAEPCLLSDLPAILHDYDVVVSSTASQLPIVGKGMVERALKQRQSMPLFMLDL
                     AVPRDIEAEVGDLNDAYLYTVDDMVNIVQSGKEARQKAAAAAETLVSEKVAEFVRQQQ
                     GRQSVPLIKALRDEGEKARKQVLENAMKQLAKGATAEEVLERLSVQLTNKLLHSPTQT
                     LNKAGEEDKDLVHAVAQIYHLDK"
     gene            7779..10084
                     /locus_tag="ACFJAG_001165"
                     /pseudo
     CDS             7779..10084
                     /locus_tag="ACFJAG_001165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753899.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
     gene            10213..12180
                     /gene="nosZ"
                     /locus_tag="ACFJAG_001166"
                     /pseudo
     CDS             10213..12180
                     /gene="nosZ"
                     /locus_tag="ACFJAG_001166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712466.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA];
                     GO_function: GO:0050304 - nitrous-oxide reductase activity
                     [Evidence IEA];
                     GO_process: GO:0019333 - denitrification pathway [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TAT-dependent nitrous-oxide reductase"
     gene            12465..12620
                     /locus_tag="ACFJAG_001167"
                     /pseudo
     CDS             12465..12620
                     /locus_tag="ACFJAG_001167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219678.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NosR"
     gene            12617..13708
                     /locus_tag="ACFJAG_001168"
                     /pseudo
     CDS             12617..13708
                     /locus_tag="ACFJAG_001168"
                     /inference="COORDINATES: protein motif:HMM:NF016906.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide reductase family maturation
                     protein NosD"
     gene            13766..14662
                     /locus_tag="ACFJAG_001169"
     CDS             13766..14662
                     /locus_tag="ACFJAG_001169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HFC3980455.1"
                     /translation="MTTHHVELRKVTKRFGAQKAVSQVDLVLKAGESVGLAGHNGAGK
                     STIMKLILGLITPTEGEVMLLGERTGSKAGARLRSQIGYLPETVALHPSLTGIETLDF
                     YAKLKKQPLTQNRGLLERVGISQTAHRRVGTYSKGMRQRLALAQALLGEPKVLLFDEP
                     TTGPDPASRQMFYEVVRELNGRGATVLLSTHALAELDGHADRIVVMKNGVKVADGSMD
                     ELHVQSGLPLTVNIRLNAPRTLSSRWQPLSDGISYRAQCQAEERMELLGELGSLSDLA
                     YFDIHTPTLDEMYARFLKREDV"
     gene            14659..15489
                     /locus_tag="ACFJAG_001170"
     CDS             14659..15489
                     /locus_tag="ACFJAG_001170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HFC3980456.1"
                     /translation="MNPVWIITGKEARDSLRNRWVLAAVLLLAALALSLGFLGSSPTG
                     SVKVDPLTVTVVSLSSLSIFLIPLIAMLLSYDALIGEIERGTMALLLSYPIWRNQILA
                     GKFVGHLIILALATTAGYGLAGITLQLANGGFDIAVWKPFALLIAASVILGAAFLSMG
                     YLISAKVKERGTAAGISIGVWLFFVVIFDMALLGILVADSKQVITAPVVETVLLFNPT
                     DIYRLLNLTGYENTAMYAGMAGLSGQIGLTVPVLLTAQVLWVIIPLVLAAGIFRKRRI
                     "
     gene            15486..15980
                     /locus_tag="ACFJAG_001171"
     CDS             15486..15980
                     /locus_tag="ACFJAG_001171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide reductase accessory protein NosL"
                     /protein_id="HFC3980457.1"
                     /translation="MKKTLLAIVAVFALSACRQAEEAPPPLPRQISDRSVGHYCSMNL
                     TEHNGPKAQIFLNGKPDQPVWFSTVKQMFGYTKLPEEPKGIRVIYVTDMGNVTDWTNP
                     NADTEWIDAKKAFYVIDSGFIGGMGAEDALPFGNKEQAEKFAKDKGGKVVGFDDMPDA
                     YIFK"
     gene            complement(16114..17775)
                     /locus_tag="ACFJAG_001172"
     CDS             complement(16114..17775)
                     /locus_tag="ACFJAG_001172"
                     /EC_number="1.5.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004174 -
                     electron-transferring-flavoprotein dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein-ubiquinone
                     oxidoreductase"
                     /protein_id="HFC3980458.1"
                     /translation="MTESITRDSMQYDVVIVGAGPSGLSAAIKLKQLAEQNGREISVC
                     VAEKGSEAGAHSLAGAVIDPIALNELIPDWKEKGAPLTRTVTQDKVLFLTEKKAFNLP
                     ITPNFDNHGNYIVSLGEVVRWLAEQAENMGVEIYPGFAAAEVLYHEDGSVKGIATGNM
                     GVGKDGGPTDSFQPGMELWARQTLFAEGCRGSLSKQIIERFQLDQNSQPQTYGLGIKE
                     VWEVPSEQHQPGLVVHSAGWPLDSKTYGGAFIYHFDDNKVAVGFVVGLDYQNPYLSPF
                     EEFQRFKTHPEIRKTFEGGRRIAYGARSLIEGGLQSLPKLSFKGGVLIGDAAGFLNMP
                     RIKGIHTAMKSAMLAAEAVFPLLENFEEVESFDSGKEAGNYQKLFEQSWLYQELYAAR
                     NVRPSFKWGVYLGSLYTGIDQMIFRGKAPWTLKHHGKDNEQLKKAAVCKPIDYPKPDG
                     VLTFDRLSSVFLANLAHEENQPDHLVLNNPQTMIDVNYKEYASPETRYCPAGVYEIIE
                     ENGSPRLQINAANCVHCKTCDIKDPTQNITWICPEGASGPNYGGM"
     gene            complement(17905..>18508)
                     /locus_tag="ACFJAG_001173"
     CDS             complement(17905..>18508)
                     /locus_tag="ACFJAG_001173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HFC3980459.1"
                     /translation="YRLNAAPMFNDNPVVYGKIKLQSWKARRDFNIVKQDLDFSCGAA
                     SVATLLNNFYGQKLTEEEVLEKLGKEQMRASFEDMRRIMPDLGFEAKGYALSFEQLAQ
                     LKIPVIVYLKYRKDDHFSVLRGIGGNTVLLADSSPGHVSMSRAQFLEAWQTREGNLAG
                     KILAVVPKGRDAGGDKAFFTRSPKRQTEFAVGQVKWWRAY"
BASE COUNT         4493 a         4806 c         4976 g         4233 t
ORIGIN      
        1 cggcacaccg tcccggcagc taaaaatcct gcgggatcgg tgtggaattt agggataatc
       61 tagtacagcc cctttgatta tgccggaatt taaaatgccg tctgaatgtt cagacggcat
      121 agcgtttaca gtagtttgaa aacgaaaaag acgagggtat gtacgatgaa gacgggtgtc
      181 aggaaggcga ccgaccacat catatagccg aagaaagtcg gcatcggtac gccgcgctgt
      241 tcggcaatgg ccttgaccat gaagttcggt gcgttgccga tgtaggtcag tgcgcccatg
      301 aataccgaac ccatagaaac cgccagcagc gaatgaaaca ggggacccgt cattaaggct
      361 tgggcatcgc cgcccgccat attgaaaaac acgagataag tgggcgcgtt atccaagaat
      421 gccgacaata tgccgctcat ccagaaatac atcgtattaa tcggatgacc tgccgtatcg
      481 tgaaccagcg ataccacccc gcccagcgcg cctgcctcgc ctgctttcag aatgctcagg
      541 acggggaaga tggtgatgaa gatgccgagg aagagtttgc ccacttcggc gatgggttca
      601 aagttgaatt cgttgcctgc gcggacttgt ttgggcgtga ttgccataga tacggcggtc
      661 aatgtaatca ggatgacatc gcggacaagg ttttgcaggg cgtaacggct gccgaggatt
      721 tcaaatcccg ggtgttcggg tttccaaagg ccggacatta gaaccgcgcc gaccacgccc
      781 gaaagcagga ggaagttcca tttgccgaag atggcgattt tttcgggttt ttcctgttgt
      841 gccggcgtat cttgtgcaat gctttcctgt ttgaagaaac ggttgtcgat gaaatagaag
      901 gcggtcaaca ggacagcggt gctaatcagg acgggggcga acatatgttt gaccgtccac
      961 atgaaatcta cgcctttgag gaagccgagg aagagtgggg ggtcgcccaa aggggtcagg
     1021 ccgccgccga tgtttgcaac caggaaaatg aagaagatga cgatgtgcac gcggcgggta
     1081 cggtcttggt tggctttcag cagcggacga atcatcagca ttgccgcgcc ggtcgttccc
     1141 atgatagagg caagtgccgt accgacggca agcagggcgg tgttgagctt gggtgtgccg
     1201 ttcaagtcgc cccaaaccaa aatgccgcct gaaatggtgt acagggcaag cagcagcagg
     1261 atgaagggga tatattcttc aacgagtgcg tgtgcgacgg tatggatacc ggcggacgcg
     1321 ccaaaaacca aactgaacgg gatgaggaag agcaatgtcc aaaaggcggt gattttgccg
     1381 taatggtgat gccaggtatg cgaaaaaaac aagggaccca atgcgataga cagcaaaatc
     1441 agggcaaagg gcaagcccca cagcaggttt aggtttgcgc cgtccgaatc tgcggcgtaa
     1501 accgatgccg ggaaaagcat tagtgaaaac aggggtaggt ggcgcatcgt gtttcctcga
     1561 ttcaagcact gccttgcgcg gcgcacggga gtgatacagg cttcgtgccg cccggacata
     1621 ggcggactgt gctgcctgtt tgtttttgaa aaaagttttc cgattgattg taaagtaaat
     1681 aatcaggata aaccagtttc ccaaaccgga aggcggcggg aaggcggatt gccgtgcttg
     1741 ggaatatatg ttctttttga taaataattt tatttaaaac aaataaatat atgtctttaa
     1801 taaataatct gtcgaaaacg aaaaataaat ttattttaac atatatttgc aatgaaacag
     1861 gtttgcccca cccgtttgtt tgcccttatc cctttcagac ggcattcaag attcgggtct
     1921 gcgccacatc catatggcga caagggaaca aaaaaccgat gaaaccgccc cgacccacca
     1981 gcgttgggga aactgccaaa acatcatcag gcaggatgcg gtcatcatgc tgatggcgaa
     2041 aatcttggct ttgcgcggca ctgcgccgtt ttgttcccag ttatgaacca tcgggccgaa
     2101 atagcggtgc cggtgcagcc agcggtgaaa gcgcggggat gcctttgccc agcaggcggc
     2161 ggagagtagt acgaacggcg tggtcggcaa cagcggcaaa aaaatgccga ttatccccaa
     2221 cagcagggag atgccgccgc aggcaattaa aagataacgg atcattttga aatatttttc
     2281 ttattgtgcg gataagggca ggatgtgata ccgagttttg cccagccttc atgtcccatt
     2341 ttttccagca gggcgatatt gcgttcgaat attgccgaag cgtcgggaaa ggcttgtgcg
     2401 gctttggcaa tgctgtcttc gcggatgagg tgcagcgtcg gatagggaga acggttggtg
     2461 tagttgccga tgccgtctga atccgtgcct tcaaattgga aatagggatg aaacggggcg
     2521 atttggacga tgccttccaa gccgttttcg acaacggcgg catcggcaat gtcgagcata
     2581 tcgttgaata cgtcgaaatc ggggaatagg gtcgggtgaa ccagcagggt ggtttccagt
     2641 tcggtggcgg gtgtattgcc cagtcgctgc agttcttcgt ccaagtcttc caaaaaaccg
     2701 tcaaggtgtt tggcttcgct gatcgcgatg cggacaaggt ttttaacgtg gggggctttg
     2761 gcaaagggac acaggttcag accgatgacg gctttttcca accattgtcc ggtgtgttcg
     2821 gcaacagcat ctttattttc ggaagtatcg atattcatta ttgtcatgta aatgtgtttg
     2881 cagagtgcac gtgcgggaaa atcgggaagg gcactattcc ttcagcaggt ggttgagcgg
     2941 cagggaggtg gtgtgtttga tttcttttaa aacaaagctc gattgcgcat cctgtacgcc
     3001 gtggtgggat aaaagcgtat ccaaaacaaa atgggaaaac gcgttcatat cggtaaaaaa
     3061 tgcctgaagc aggtagtcgg tctcgccggt tagggcgaag cagctcaaga cttccggcca
     3121 ttttcgaacc gatgcggcaa aatcttcccg cgcgtctttt gctttgcgga tggaaacgcg
     3181 gataaatgcc tgaagaccta agttgacgga ttccggagac agcagcgcgg catattggcg
     3241 gacgatgccg gcatcttcca actgcttcag acggcgcagg cacggagaag gcgaaagtgc
     3301 gacacgttcg gacagttcga cattggtcag cctgccgttt tcctggagga cctgtaagat
     3361 tttaatatcg gttttgtcta aagtgagttg gggcatattt gcgttccgtt ttaaggaatt
     3421 cggattgtct gtccgtatgt ttgcggcaat ccgcatagat ggagaccata ttaacatata
     3481 aaaagttata ccgtcatccg ggacaaattt tgttttcgga aaatcatgtg aaaacagagg
     3541 cggtcggttt gcatctcttt taagacggct tgcccaaacc gccgattcaa gacataatcg
     3601 ggaaatgtgc aggagagtgt tacacccaac tacaatgtaa ccaccgaagg cgcagacacc
     3661 cttaaatcgc tcaggtatca gggactgcac attgaaacaa acaatctgga gagcggcgtt
     3721 agaataacgt ccaccgaagg ggagaaggcc gtctgaacca ccattcagac aaccgcgcaa
     3781 agcagtgagc agactggttt gccatcatgc ggatacggcc gaaaatctca ggttcaagga
     3841 cagatagggt catccgcgca caggtgcgcg ggcggcatct gaacaaaaaa tccggagaaa
     3901 cttgagaatg actgctctga aaaccacccc gtttcatcaa gcccatcaag atgcaggcgc
     3961 gaagccggta gattttgccg gctgggaact gcccatccat tatggttcgc aaatcgccga
     4021 acacgaagcc gtgcgcaccg acgccggtat gtttgacgta tcccatatgc tcgttaccga
     4081 cgtcgtcgga gcgaacgcca aagccttttt ccgcaaattg attgccaacg acgttgccaa
     4141 actcgctttt gtcggcaaag ccctttattc cgctttgctc aacgacaacg gcggcgtgat
     4201 tgacgacttg atcgtttacc gcaccaacga ggccgaaacc caataccgca tcgtgtccaa
     4261 cggtgcgacc cgtgaaaaag acacggcaca attccacaaa gtcggacaag agttcggcgt
     4321 tgccttcaat ccgcgctacg acctcggtat gcttgccgta caaggtccta aagccattga
     4381 aaaactcctg accgtcaaac ccgaatgggc ggatgtgatt cacggcctca aaccgttcca
     4441 aggcgcggat ttgggcaacg actggtttgt cgcccgtaca ggctacaccg gcgaagacgg
     4501 cgtcgaagtg attctgccgg ataccgaagc cgtcgcattc ttcaaagtcc tgcaaacagc
     4561 aggcgtacag ccttgcggcc tcggcgcgcg cgacaccctg cgcatggaag ccggtatgaa
     4621 cctctacggc aacgatatgg acgacgacac cagcccgctc gaagcaggca tgggccggac
     4681 ggttgatttg aaagacgaaa gccgcgattt tgtcggtaaa gccgccttgt tggcattgaa
     4741 agaaaaaggc gttgccgtca aacaagtcgg tttgctgctc gaaaaaggcg gcatcctgcg
     4801 cgcgcatatg gaagtgttga ccgacaaagg aaaaggcgaa accaccagcg gcgtattctc
     4861 gcccagcctg aaacaatcta tcgccatcgc ccgcgtaccg aaagattttg acggcgatac
     4921 cgccaaagtc ctgattcgcg gcaaagaagc ggacgtgcgc gtactgaagc tgccgttcgt
     4981 ccgcagcggt caaaaacagt ttgattaata tcggttcaga cggcatttgt ttgaattaag
     5041 ccgtctgaaa gcaggtttta aggaattgtt atttcctatg aaagcaaatt ttggcagttt
     5101 attgttgtta ttgatgttat cggcttgcgc ttcgtcgccg gcgagcgcgg attgatgttt
     5161 ttcgatacag aaggaaaatc ccatactgca atatttatga aaatcgttgg cggcaatgga
     5221 aagattgccg gcgaggtggt gatagacggg gaatatgctc ttgatattgt ccgcatgaat
     5281 gatgatttga gtattgccgt gcaagataat aagggtagaa gccgtgcttc cgacctggaa
     5341 gcattgtcgc aagcgaaatc atttacccta attgcgttca gccgttatgc gggcacagtt
     5401 gaagtggata aagtatcggc tgttacaggc atttgtgcag attaccgcag caaaggcctg
     5461 aaggttgccg ttgcagacaa tatgaggccc aaacaagaaa tcgttgtatt ccgtgcaagc
     5521 ggcgtaatgg caagtaataa gcgcaagata aacgaagcat atttggatta ttctgcatcc
     5581 tctaaactgc cttccgccca aaagcaagaa ttggaacaag ataaaaacaa tatgattgcc
     5641 gtccattacg gacgcttgga agaattaatc gcacgaggta tctgcgtacg ctaagttgtg
     5701 cagatgccgt ctgaaaataa ccccctacca atggagaatc aaaccatgag caacaacatc
     5761 ccaacagaac tgaaatacgt tgccagccat gaatggctgc gccttgaaga agacggtatc
     5821 attaccgtcg gtattaccca tcacgcgcaa gagctgttgg gcgacatcgt gtttgtcgag
     5881 ctgcccgaag tcggtgcgaa cctcgccgcc gaagaacagt ccggtgtggt tgagtctgta
     5941 aaagccgcat ccgacgtgta tgcgccgatt gcgggcgaag tcgttgccgt caacgatgac
     6001 ttgccaggcg cgccggaaac cgccaacagc gacccttacg gcgcaggctg gttcttcaaa
     6061 atcaaacctg ccaatcctgc cgattacgac ggtctgctga ctgccgaaca atacgcgggc
     6121 gaagtggatt aaaccgcccg tttgtccgac ggcaaccgtc ggacaaacgg aaactgcacc
     6181 ttcagacggc atttctgcgg tcggaggtgc agtttttttg tccgtgtttt aaggatgcag
     6241 ttaggctata ataacggtct atatccatct tcaccgattt tttcatgcaa cttaccgctg
     6301 tcggactcaa tcatcaaacc gcacctttaa gcatacggga aaagctggcg tttgccgccg
     6361 ccgccctgcc agaagccgtc cgcaatcttg cccgaagcaa tgcggcaacg gaggcggtaa
     6421 tcctttctac ctgcaaccgc accgagcttt actgcgtcgg cgattcggaa gaaatcatcc
     6481 gatggcttgc cgattaccac agtttgccga ttgaagaaat ccgtccgtat ctgtacacgc
     6541 tggatatgca ggaaaccgtg cgccacgcct tccgcgttgc ctgcggcttg gattcgatgg
     6601 ttttgggcga gccgcagatt ttggggcaga ttaaagatgc ggtgcgtgcg gctcaagaac
     6661 aggaaagtat gggggcaaaa ctcaatgccc tgttccaaaa aaccttttcc gttgctaaag
     6721 aagtccgtac cgataccgct gtcggcgaaa attcggtttc gatggcttcc gcgtccgtca
     6781 agttggcgga acagattttt cccgacatcg gcgatttgaa cgtattgttt atcggcgcag
     6841 gcgaaatgat tgagctggtt gccacttatt ttgccgccaa aaatccccgg ctgatgacgg
     6901 ttgccaaccg gacgctggcg cgtgcacagg agttgtgcga caagctcggt gttaacgccg
     6961 aaccgtgcct gctgtccgat ctgcctgcca ttctgcacga ttacgacgtg gtggtttctt
     7021 caacggcgag ccagcttccg atagtcggca aaggcatggt cgaacgcgca ttgaaacagc
     7081 gtcagagtat gccgttgttc atgcttgact tggccgtgcc gcgcgatatt gaagcggaag
     7141 tcggcgattt gaacgatgcg tatctttata cggtggacga tatggtcaac atcgtccaaa
     7201 gcggcaagga ggcaaggcag aaggccgccg ccgccgccga aacgctggtg tccgagaagg
     7261 ttgccgaatt tgtcaggcag cagcagggca ggcagagcgt tccgctgatt aaggccttgc
     7321 gggacgaggg cgagaaagcg cgcaagcagg tgttggaaaa tgcgatgaaa cagcttgcca
     7381 aaggcgcaac ggcggaagag gttttggaac ggctgtccgt ccaactgacc aacaagctgc
     7441 tgcattcgcc aactcaaacc ttgaataagg cgggggaaga agataaagat ttggttcatg
     7501 ccgtcgcgca gatttatcat ttggacaaat aacggtgcgc cggaaaagga tgccgtctga
     7561 aggggtttca gacggcatat ttttgtgccg cctgacaaca tcgtgaaatc ccacattata
     7621 tcgatgtaat tacaaagtat tatcctatat gcggattggt tttaagattt gtaaatttga
     7681 tttgcatcaa aaatcgccga tagatgattc atataatatc aatattaaag agtatcggta
     7741 tatcggggat agctatgtcc tgtttttcaa tccggcgtat gtctgcgttt cgggcgcgga
     7801 taacggcgtt ttttaccgcc tttgtctttt tgacggcggc actgcccgct tatgcggagc
     7861 gtctgcctga ttttctggcg aaaatacagc cttcggaaat ttttccgggt gcggatcgtt
     7921 acggcaagcc ggaaggcaag cctatggttg cccgcgttta caaaggcgat gagcagctcg
     7981 gtttggttta tatcacgacc gatgcggtca atacgcgcgg ttattcgagc aaaccgatcg
     8041 atacgctgat ggctttggca aacgacggca cgatagccgg ggcgaaactg gtcgatcatc
     8101 acgaaccgat tatgctgatc ggtatcccgc aatcgcgtgt cgataagttc atcgacaaat
     8161 atatcggtct gaattttatt aaaaatccgc cgaccccgag cgtggcgccg ggcgacatca
     8221 tcagcggtgc gactgttaca ctgatggtgg ttaacgacag catccagcgt tcgtacaagg
     8281 tcattgccaa ccaataccgt ctgggttcgg acaaggccct tcagacggca tccgcttccg
     8341 atgttcggga agccgcgcct gcgtcagaaa cccgtccgcg ccgtatggca aattccgaca
     8401 agcaggatat ttgtcttggg acgaactttt gaaacaaaag gccgtcggcc atctgcatat
     8461 cacgctcgat caaatcaaca aactgtttga gaaaggcggc aaggccggcg tggccgatca
     8521 cgccgaacag ggcgatcctg acgatacctt tattgatttg tatgttgcct tggtcagcca
     8581 gccttccatc ggtaaaagcc tgctgggtaa ggacggctgg gcgcatctgc aaaaacggct
     8641 gaaacccggg cagcaggcgg ttttggttgc cggagagggc cgtcattctt ggaaaggttc
     8701 gggctatgtg cgcggcggta ttttcgaccg tatcgagatg attcaggggg agaacagctt
     8761 ccgttttacc gatgcccaac acgaacgcgt cgtcgagctg tctgccgccg atgcgccgcg
     8821 ttttaaagaa gtttcttggt ttaccatccc tgaaggcgta gcgtttgacg gtgcggagcc
     8881 gtggcggctg taattgatgg ttcagcgcgt cttgagtgtg aacgataaag ccttcgttac
     8941 cgccgatttg gattacgaac tgccccaagc ttattacgtc gatgatccta aagcgccgcc
     9001 cgtagaaatc agcgcgcctg tcgaagcagt acctgccgca gcatccgata ccgcttcaga
     9061 cggcattgcc gaagatgcgt cagctgaaaa cggtgtatcc aaccaattat ggaaacagat
     9121 ttggaaagcg aaacaggggc agattgtcgt cgtcggcatt gcgctgacca tcctgctttt
     9181 ggtattcctg ttccaagatt ggattgtgcg ttacgaaaaa tggtacgacc gcttccgctt
     9241 tgctttccta acttttacgc tcttctatat cggctggtat gcacaggcgc agctttcggt
     9301 cgtcaatacg ctgacgctgt tttccgccat ccttaccgaa tttcattggg aattcttcct
     9361 gatggatccg attgtgttca tcctgtggct gttcacggct gcaaccatgc tgctgtggaa
     9421 cagggggacg ttttgcggtt ggttgtgtcc gttcggctca ttacaggaat tgactaaccg
     9481 cattgccaaa aaactgggtg tgaaacagat taccgtaccg catatgctgc atacccgttt
     9541 gaacgtcata aaatacctga ttttcttcgg ttttttggca atttcgctgt atgatttggg
     9601 tacggtggaa aaatttgccg aagtcgaacc gttcaaaact gcgattatct tgaaattcat
     9661 gcgcgattgg tggtttgtcg cctttgccgt ggcacttttg attgcggggc tgtttatcga
     9721 acgcttcttc tgccgttatc tgtgtccttt gggtgcgggc atcgcgctgc cgggcagatt
     9781 ccgcgtgttc gactggctgc gccgctacaa aatgtgcggc aacccctgcc aaatctgtac
     9841 gcacgaatgc cccgttcagg caatcgcgcc cgagggcgac atccatccga acgaatgtat
     9901 ccagtgcctg cactgccaag tgatgtacca ccacgatacg cgctgtccgc aagttgtggc
     9961 ggcaaataag aaaaaacaaa aacaggctgc tgccaaatca ggggaattgg aaaatgtctc
    10021 taagcagccg caggaacagg tcgtccgttt tgtcaaaccc gaaacggcgc aatctgaaaa
    10081 ataagcatcc gggggaagcc tgaagccaaa gtgtcaggca ggcagggttt ccccggaagg
    10141 ataataaaat ttttttccca tcggcttgcc gtccgaaaac cggtttgccg tattttatcc
    10201 aaggagtgtt gtatgtcaga cgaaaaatta gaacaaaacg gcttgagccg tcgttcgttc
    10261 ttaggtacgg ccgccgcttc cggtgcaggt attgccggtg cgggcctgtt gggtttggcg
    10321 ggttgctcta aagacggcga acaggctgcc gctaacgctt ccggcgcggc tcccgtcgcc
    10381 aaggcgcaag gggaatccaa acccggccaa ctgtcttccg aagtcggtcc gggcgaactc
    10441 gatcaatatt acggtttcct ttccggcggc cagtccggcg agatgcgcct gatcggtctg
    10501 ccttctatgc gcgaactgat gcgtatcccc gtgttcaata tggacagcgc gaccggttgg
    10561 ggacgcacca atgagagctt gaaagtcctc aacggcaata ttaccgaaga aacccgtaaa
    10621 ttcttaaaag acggcggcct gcgctgctac cccaacggcg acttgcacca cccgcacctg
    10681 tcgtttaccg accaaactta tgacggccgc tatgcctatg ccaacgacaa ggcaaacaac
    10741 cgcgtctgcc gcgtgcgttt ggatgtgatg aaggccgaca aaatcatcga catccctaat
    10801 gattcaggta ttcacggtct gcgtccgcaa cgttatccga aaaccggtta tgtttttgcc
    10861 aacggcgaac acattacccc tgtcagcggt gtaggcaaac tggatgatgc gaaaacctgg
    10921 aatgcagtgt acaccgccat cgacggcgaa accatggaga tcgcatggca agtattggtt
    10981 gacggtaacc tggacaacgg cgatgccgac tatcaaggca aatattcttt tgccacctgc
    11041 tacaactccg agcgcgcgct gaccgtacaa ggtgcgtctt ccaacgagca ggactggtgc
    11101 gtcgttttcg acctgaaagc catcgaagaa ggcatcaaag cgggcgactt caaagaagtt
    11161 aacggtgtga aaatgctgga cggccgcgct gaggccaaat ccaaatacac gcgttatatc
    11221 cctgtgccga actctcctca cggctgtaac gcaagccctg acggtaaata catcatgccc
    11281 aacggtaaac tgcctccaac cgttaccgta ttggatgtca gcaaactgga cgatttgttc
    11341 gccggcaaaa tcaaagagcg cgatgtggtc gtagccgaac cgcaactggg tctcggcccg
    11401 ttacacactg cattcgacgg tcgcggcaat gcttatacga cattgtttat cgacagccaa
    11461 atggtgaaat ggaatattga cgatgcgatc aaagcctaca aaggcgagaa aatcgatccg
    11521 atcaaacaaa aactcgacgt tcactatcaa ccgggtcaca accatacgac catgggcgaa
    11581 accaaagaag ccgacggtca atggctggtg tccttgaaca aattctccaa agaccgcttc
    11641 ttgaatgccg gtcctttgaa acccgagtgc gaccaattga tcggcatctc cggcgacgaa
    11701 atgcgtctgg tacacgacaa cccgactttt gccgaaccgc acgacttgtg tttggttgcc
    11761 gcgtccaaac tgaacccggg caaaacttgg gaccgcaaag acccgtggtt ctagcaggat
    11821 gctttggaac aggcgaaaaa agacggtgtc gagctggaaa aagccgccaa agccgtacgc
    11881 gaaggcaaca aagtacgcgt gtatatgacg gccgtcgcgc ctgcttacag tatcccgcag
    11941 tttgaagtga accaaggcga cgaagtaacc gtttacgtta ccaacgtcga aaccatcgag
    12001 gacctgaccc acggcttcac tttggaaggc tgcggcatcg ctatggaaat cggcccgcaa
    12061 gccacttctt ccgtaacctt caaagccgtc cgcccgggtg tgcactggta ctactgccaa
    12121 tggttctgcc acgcattgca tatggaaatg tccggtcaga tgattgttca tcccaaataa
    12181 tgcggcccga cggctgaata tggagaatgg cgtctgaagg caacaggtct tcagacggca
    12241 tttatagcca aaccgcttgc cgtaccgttt caggcggttt cgctataaaa acaggcacat
    12301 ttgaatgatg ctttattttg ttcggccata ccgaacgaaa cagagggaca ctatgcacac
    12361 atccgcgctc cgtatatggc tgaaggccgt gctgatactt gccgccggca gcatttttca
    12421 gacggcatcg gcagccgtcg tccacgtttc cccgcaagac aaccttgccg aaatttttgc
    12481 ccgcgcccgg gcgggcgata cgatcaaact ggcttccggc gtatatcaaa ccaaacttta
    12541 tatcgacaaa ccgattacga ttgaagggcc tgccgaccgt tccgcaacca tcgaagggga
    12601 caagagcggg cgtaccatag ccgtacacgc gccggacgta acgctccgca acctgaccgt
    12661 tacccgttcc ggtatgagcc tgccagcaat ggatgccggt atttatctcg aaaaagccgc
    12721 cccgcgcgcc ctgattgaac acaacaatat ttttgataat tcgttcggcg tataccttca
    12781 tggttctgcc gatgcgatgg tgcgcgagaa taaaatcgtc ggcgatgcgg ccttgcgcgt
    12841 gaatgagcgc ggcaatggcg ttaccgtttg gaacgcgccc ggcgcgcagg tcgtcggcaa
    12901 cgacatttcc aaagggcggg acggcatttt ttccaatacc agcacgcaca acacctataa
    12961 aaacaaccgc ttcagcgacc tgcgtttcgc cgtccactat atgtacacca acgacagcga
    13021 agtcagcggc aatatttgcg tgggcaacaa tatgggctat gtgctgatgt tttccgaacg
    13081 gctcaaagtg ttcgacaata tcgccgtcgg cagccgcgat tagggcatca tgctcaacta
    13141 tgtcaactat tccgatattc acgacaatat tatcaacaaa gcgggcaagt gcgtttttgc
    13201 ctacaatgcc aactacgata aactgtccgc caatcatttt gaaaactgcc aaatcggcat
    13261 gcactttacc gccgccatcg aaggcgcgtc cctgcacgac aattccttta tcaacaacgg
    13321 aagccaggtc aaatatgtca gtacgcgctt tctcgactgg agcgagggcg gacacggcaa
    13381 ctactggagc gacaacagcc cgttcgattt gaacggcgac ggcttcggag acagcgcgta
    13441 ccgtcccgac ggcatcatcg accaaatcat ctggcgcgcg cccgtatcgc gcctcttgat
    13501 gaacagtccc gcaatcagca tcgtcaaatg ggcgcaggcg cagtttcccg ccgttctgcc
    13561 cggcggcgtg gtggacagca aaccgctgat gaagccttat gcccccaaaa ttcaaacccg
    13621 ttatcaggcg atgaaggacg agttgctcaa agaagccgaa acgcggcagt cggaacgggg
    13681 cagggcggaa aacggttctt tgaactagtc tgcttcagac ggcacccgga ttcaaatgcc
    13741 gtctgaaaac acaaaaggaa caaccatgac cacacatcat gtcgaattga ggaaggtaac
    13801 caaacggttc ggggcgcaaa aagccgtcag ccaagtcgat ttggttttga aggcaggaga
    13861 aagcgtcggg cttgccggac acaacggcgc gggcaagtcc accatcatga agctgatact
    13921 cgggctgatt accccgaccg aaggcgaagt gatgcttttg ggcgaacgta ccggcagcaa
    13981 agcgggggcg cggcttcgca gccaaatcgg ctacctgccc gaaaccgttg cgctgcaccc
    14041 ttcgctgacc ggcatcgaaa cgctggattt ttatgccaaa cttaaaaaac agccgctcac
    14101 gcagaaccgg gggctgcttg agcgcgtcgg catttcccag accgcacacc gccgcgtcgg
    14161 cacttattct aaagggatgc gccaacgcct tgccttggca caagccctgc tgggcgagcc
    14221 caaagtcctg ctgtttgacg aaccgacaac cggccccgac cctgcatcac gacaaatgtt
    14281 ttacgaagtc gtgcgcgaac tcaacgggcg cggcgcgacc gtattgctca gtacccacgc
    14341 ccttgccgag ttggacggac acgccgaccg cattgtcgtg atgaaaaacg gcgttaaggt
    14401 tgccgacggc agtatggacg aattgcacgt ccaaagcggg ctgccgctga ccgtcaatat
    14461 ccgcctcaat gcgccgcgca ccctcagcag ccgctggcag ccgctttcag acggcatttc
    14521 ctaccgggcg caatgtcagg ccgaagaacg tatggaactg ttgggcgaat tgggcagcct
    14581 gtccgacctt gcctatttcg acatccacac gccgacgctt gacgaaatgt acgcacggtt
    14641 cttgaaaagg gaggacgtat gaaccccgtt tggattatta ccggcaaaga agcccgcgac
    14701 agcctgcgta accgctgggt gcttgccgcc gtcctcctgc ttgccgcact cgccctttct
    14761 ttgggtttcc tcggcagctc gcccaccggt tcggtcaagg tcgatccgct gaccgttacc
    14821 gtcgtcagcc tgtcgagcct gtctattttc ctgattccgc tgattgcgat gctgctttct
    14881 tatgacgcac tgatcggcga aatcgaacgc ggtacgatgg cgttgctgtt gagttatccc
    14941 atttggcgca accaaatcct tgccggcaag tttgtcggac acctcatcat ccttgccctt
    15001 gccaccacgg caggttacgg attggcaggc attacgctgc aacttgccaa cggcggtttc
    15061 gacatcgccg tttggaaacc ctttgcgctg ttgattgccg ccagcgtgat tttaggtgcg
    15121 gcatttctgt ctatgggcta cttgattagt gcaaaggtca aagagcgggg gacggcggcc
    15181 ggtatttcca tcggcgtatg gttgtttttc gtcgtcatct tcgatatggc gcttttgggt
    15241 attctggttg ccgactcgaa acaggtcatc accgcgcccg tcgttgaaac ggtgctgctg
    15301 ttcaatccca ccgacattta ccgcctgctc aacctgaccg gttacgaaaa tacggctatg
    15361 tatgcgggta tggcgggttt gagcggacaa atcggcctga ccgtccccgt tttgctgacc
    15421 gcgcaggttt tatgggttat cattccgctt gttttggcag ccggaatttt tagaaagcga
    15481 cgaatatgaa gaaaaccctg ttggcaattg ttgccgtttt cgccttaagt gcctgccggc
    15541 aggcggaaga ggcaccgccg cctttacccc ggcagattag cgaccgttcg gtcggacact
    15601 attgcagtat gaacctgacc gaacacaacg gtcccaaagc ccagattttt ttgaacggca
    15661 aacccgatca gcccgtttgg ttctccaccg tcaagcagat gttcggctat accaagctgc
    15721 ccgaagagcc caaaggcatc cgcgtgattt acgttaccga tatgggcaat gttaccgatt
    15781 ggacgaatcc taatgccgac acggagtgga tagatgcgaa aaaagccttt tacgtcatcg
    15841 acagcggctt tatcggcggt atgggcgcgg aagacgcgct gccgttcggc aacaaggagc
    15901 aggctgaaaa atttgcaaag gataaaggcg gcaaggtcgt cggttttgac gatatgcccg
    15961 atgcttacat tttcaagtaa atccaaacag aaatgccgtc tgaacgttga agccaaggtt
    16021 cagacggcat tttttgtcat aggttcaaac ggggcaggtt cgaacaactg ccccattcct
    16081 tattcctgac cgggcgtaac ggcggaatga ggtttacatc ccgccgtaat tcggtccgct
    16141 tgcgccttcg gggcaaatcc aagtgatgtt ttgcgtcggg tctttgatgt cgcaggtttt
    16201 gcagtgcacg cagtttgccg cgttgatttg caggcgcgga ctgccgtttt cttcgatgat
    16261 ttcatatacg ccggccggac aatagcgcgt ttcgggagag gcgtattctt tatagttcac
    16321 gtctatcatc gtttgcggat tgttcagcac caaatggtcg ggctggtttt cttcgtgcgc
    16381 gagattggca aggaagacgc tgctcaagcg gtcaaaggtc aacacaccgt cgggtttcgg
    16441 ataatcaatc ggcttgcaca cggcggcttt tttgagctgc tcgttgtctt tgccgtgatg
    16501 tttcaaggtc cacggggctt tgcctctgaa aatcatctgg tcgatgccgg tataaagcga
    16561 gccgaggtaa acgccccatt tgaatgacgg acggacattg cgcgcggcat aaagctcttg
    16621 atacagccag ctttgttcaa acagtttttg atagtttccc gcttctttgc cgctgtcgaa
    16681 gctttccact tcttcaaagt tttccaacaa ggggaacacg gcttcggcgg cgagcatggc
    16741 ggatttcatc gcggtatgaa tgcctttgat gcgcggcata ttgaggaacc ccgccgcatc
    16801 gccgattaaa acgcccccct tgaacgagag cttcggcagg ctttgcaaac cgccttcaat
    16861 cagcgaacgc gcgccgtaag caatgcggcg gccgccttca aaggttttgc ggatttcggg
    16921 atgggttttg aaacgttgga actcttcaaa cggcgacaga tacgggtttt gatagtccaa
    16981 accgaccacg aagccgacgg cgactttgtt gtcgtcgaaa tggtaaataa acgcaccgcc
    17041 gtaggttttg ctgtccagcg gccagcctgc gctatgcacc accaaaccgg gctgatgctg
    17101 ttcagacggc acttcccaaa cttctttgat gcccaagccg taagtttgcg gctggctgtt
    17161 ttggtcgagt tggaaacgtt cgatgatttg cttggaaagc gaacctcggc aaccttcggc
    17221 aaacagggtt tgccgcgccc aaagctccat gccgggctgg aaactgtcgg tcggcccgcc
    17281 gtctttgcct acacccatat tgccggtcgc aatacctttg accgagccgt cttcgtgata
    17341 cagcacttcg gcggcggcaa agcccggata gatttccacg cccatatttt ccgcctgctc
    17401 cgccaaccag cgcacgactt cgcctaagct gacgatgtag ttgccgtgat tgtcgaaatt
    17461 cggggtaata ggcagattga acgctttttt ctccgtcagg aacaacacct tgtcctgagt
    17521 taccgtgcgc gtcagcggcg cgcctttttc tttccagtcg ggaatcagct cattcagcgc
    17581 aatcggatcg ataaccgcgc ccgccagcga atgcgccccc gcctccgaac ccttctccgc
    17641 cacgcaaacg ctgatttcgc gcccgttctg ttcggcaagc tgcttgagtt tgatggcggc
    17701 ggacaacccc gacgggcctg cgccgacaat cacgacatcg tattgcatac tgtcgcgggt
    17761 gatggattct gtcatggcgg ttcctgtgta tttattattg aattgcaaat ccgtaattat
    17821 acaacgggaa catatagtta ccaaatacaa caaaggtcgt ctgaaaacca tattttcggt
    17881 tttcagacga cctttgtcga aatttcaata agcacgccac cattttacct gtccgaccgc
    17941 aaactccgtc tgacgtttcg gactgcgtgt gaaaaacgcc ttatccccac cggcatccct
    18001 ccctttcggc acgaccgcca aaattttgcc tgccaaattt ccctcacggg tttgccaagc
    18061 ctccaaaaac tgcgccctgc tcatcgaaac atgacccggc gacgagtcgg caagcaaaac
    18121 cgtattgccg cctatgccgc gcaataccga aaaatggtcg tctttgcggt atttcagata
    18181 cacgatgacg gggattttca actgcgcgag ctgctcgaaa gacagggcat agcccttcgc
    18241 ctcaaaaccc aaatcgggca taatgcgccg catatcctca aacgacgcgc gcatctgctc
    18301 cttacccagt ttttccaaca cttcttcttc cgtcagcttt tgcccgtaaa aattgttcaa
    18361 aagcgtcgcc accgaagccg ccccgcagga aaaatccaaa tcctgcttta caatattgaa
    18421 atcccgccgc gctttccaac tctgcaattt gatttttccg taaacaacag gattatcgtt
    18481 aaacatcggt gcagcattca aacgataa
//
LOCUS       DAXFZM010000042        18508 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.042, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000042 DAXFZM010000000
VERSION     DAXFZM010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 18508)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18508)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18508
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.042"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            153..1217
                     /locus_tag="ACFJAG_001174"
     CDS             153..1217
                     /locus_tag="ACFJAG_001174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-butanediol dehydrogenase"
                     /protein_id="HFC3980460.1"
                     /translation="MKAARFYNKGDIRIEDIPEPTVAPGTVGINVAWCGICGTDLHEF
                     MEGPIFIPPCGHPHPISGESAPVTMGHEFSGVVYAVGEGVDDIKVGQHVVVEPYIIRD
                     DVPTGEGSNYHLSKDMNFIGLGGCGGGLSEKIAVKRRWVHPISDKIPLDQAALIEPLS
                     VGHHAYVRSGAKAGDVALVGGAGPIGLLLAAVLKAKGIRVIITELSKARKDKARESGV
                     ADYILDPSEVDVVEEVKKLTNGEGVDVAFECTSVNKVLDTLVEACKPAANLVIVSIWS
                     HPATVNVHSVVMKELDVRGTIAYCNDHAETIKLVEEGKINLEPFITQRIKLDKLVSEG
                     FERLIHNNESAVKIIVNPNL"
     gene            1358..1681
                     /locus_tag="ACFJAG_001175"
     CDS             1358..1681
                     /locus_tag="ACFJAG_001175"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004636 - phosphoribosyl-ATP diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-ATP diphosphatase"
                     /protein_id="HFC3980461.1"
                     /translation="MGDSVLSAIQQTIIQRKSADPSESYVAQLLHKGEDKILKKVIEE
                     AGEVLMASKDKDPSHLVYEVADLWFHTMILLTHHDLKAEDVLDELSRRQGLSGLAEKA
                     ARTES"
     gene            1755..2078
                     /locus_tag="ACFJAG_001176"
     CDS             1755..2078
                     /locus_tag="ACFJAG_001176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine triad nucleotide-binding protein"
                     /protein_id="HFC3980462.1"
                     /translation="MDNCIFCKIAAKEIPAQTVYEDGEMVCFKDINPAAPLHLLLIPK
                     VHFDSLAHAAPEHQPLLGKMMLKVPEIAKASGLTDGFKTLINTGKGGGQEVFHLHIHI
                     MGTPV"
     gene            2125..2328
                     /gene="tatA"
                     /locus_tag="ACFJAG_001177"
     CDS             2125..2328
                     /gene="tatA"
                     /locus_tag="ACFJAG_001177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0043953 - protein transport by the Tat
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatA"
                     /protein_id="HFC3980463.1"
                     /translation="MGSFSLTHWIIVLIIVVLIFGTKKLRNVGKDLGGAVHDFKQGLN
                     EGTDGKEAQKDDVIEHKKDEDKA"
     gene            2332..3018
                     /gene="tatB"
                     /locus_tag="ACFJAG_001178"
     CDS             2332..3018
                     /gene="tatB"
                     /locus_tag="ACFJAG_001178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008320 - protein transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase protein
                     TatB"
                     /protein_id="HFC3980464.1"
                     /translation="MFDFGLGELIFVGIIALIVLGPERLPEAARTAGRLIGRLQRFVG
                     SVKQEFDTQIELEELRKVKQAFEAAAAQVRDSLKETDTDMQNSLHDISDGLKPWEKLP
                     EQRTPADFGVDENGNPLPDTANTVSDGISDVMPSERSDTSAETLGDDRQTGSTAEPAE
                     TDKDRAWREYLTASAAAPVVQAVEVSYIDTAVETPVPHTTSLRKQAINRKRDFRPKHR
                     AKPKLRVRKS"
     gene            3031..3801
                     /gene="tatC"
                     /locus_tag="ACFJAG_001179"
     CDS             3031..3801
                     /gene="tatC"
                     /locus_tag="ACFJAG_001179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HFC3980465.1"
                     /translation="MSETQNEQTVQPLVEHLIELRRRLMWMVVGILVCFFGMMPFAQQ
                     LYTFIADPLMANLPKDTSMIATDVIAPFFVPVKVTLMAAFLVSLPHTLYQIWAFVAPA
                     LYQNEKRLITPLVLSSVSLFFIGMAFAYFLVFPVIFKFLAGVTPVGVNMATDIDKYLS
                     FILGMFVAFGTAFEVPIVVILLTKIGAVTTEQLKHARPYVIVGAFVVAAVITPPDIIS
                     QTLLAIPLILLYEAGIWFGRFFTPRSEQDGDIQPPAKT"
     gene            3845..4432
                     /locus_tag="ACFJAG_001180"
                     /pseudo
     CDS             3845..4432
                     /locus_tag="ACFJAG_001180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704478.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0030428 - cell septum [Evidence IEA];
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA];
                     GO_process: GO:0000917 - division septum assembly
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Maf family nucleotide pyrophosphatase"
     gene            4461..4814
                     /locus_tag="ACFJAG_001181"
     CDS             4461..4814
                     /locus_tag="ACFJAG_001181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2069 domain-containing protein"
                     /protein_id="HFC3980466.1"
                     /translation="MNRQTAYFLASFSLIALIALSLSWELWIAPLRPGGSWLALKALP
                     LCLPLSGILKKKIYTYQYSSMLVLIYFAEAVMRLFNAYPAEKICAALSAVFSIIFFIS
                     CLSFVKQYKETNNVR"
     gene            4804..6732
                     /locus_tag="ACFJAG_001182"
     CDS             4804..6732
                     /locus_tag="ACFJAG_001182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Wzy polymerase domain-containing protein"
                     /protein_id="HFC3980467.1"
                     /translation="MSAETTVSGARPAAKLPIYILPCFLWIGIIPFTFALRLKPSPDF
                     YHDAAAAAGLIVLLFLTAGKKLFDVKIPAISFLLFAMAAFWWLQARLMNLIYPGMNDI
                     ASWVFILLAVSAWACKSLVAHYGQERIVTLFAWSLLIGSLLQSCIVVIQFAGWENTPL
                     LQNIIVHRGQGVIGHIGQRNNLGHYLMWGILASAYLNGQRKIPAALGAICLIMQTAVL
                     GLVNSRTILTYIAAIALILPFWYFRSDKSNRRTMLGIAAAVFLTALFQFSMNAILETF
                     TGIRYETAVERVANGGFTDLPRQSEWNKALAAFQSAPIFGHGWNSFAQQTFLINAEQH
                     TIHDNFLSTLFTHSHNIILQLLAEMGISGTLLVAATLLTGIAGLLKRSLTPASLFLLC
                     ALAVSMCHSMLEYPLWYVYFLIPFGLMLFLSPAEASDGIAFKKAANLGILTASAAIFA
                     GLLHLDWTYTRLVNSFSPAADDSAKTLNRKINELRYISANIPMLSFYADFSLVNFALP
                     EYPETQTWAEEATLKALKYRPYSATYRIALYLMRQGKVAEAKQWMRATQSYYPYLMPR
                     YADEIRKLPVWAPLLPELLKDCKAFAAAPGHPETKPCKRPASADADTARNVKLHARHC
                     KKQQTGREIRYQKTLQPC"
     gene            6808..7485
                     /gene="misR"
                     /locus_tag="ACFJAG_001183"
     CDS             6808..7485
                     /gene="misR"
                     /locus_tag="ACFJAG_001183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003684348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator MisR"
                     /protein_id="HFC3980468.1"
                     /translation="MSRVLLVDDDALLTELLTEYLSAEGLNVRSVPDGEAGVQEILSG
                     QYDVVVLDSMMPKMNGLDVLKNVRARSTVPIIMLTAKGDDIDRIIGLEMGADDYVPKP
                     CTPRELLARINAILRRAQHSGEQNNAPNSISVSDVVLYPAKRQASVKDMPLELTSTEF
                     NLLEVLMRHAGQVVSKETLSVEALDRKLAKFDRSIDVHISSIRHKLGDASLIQTVRGL
                     GYLFVKN"
     gene            7498..8904
                     /gene="misS"
                     /locus_tag="ACFJAG_001184"
     CDS             7498..8904
                     /gene="misS"
                     /locus_tag="ACFJAG_001184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     MisS"
                     /protein_id="HFC3980469.1"
                     /translation="MKLFQRIFATFCAVIVCAIFVASFSFWLVQNTLAENQFNQRRTI
                     ETTLMGSIISAFKTRGDNGAREILTEWKNSPVSSAVYVIQGDEKKDILNRYIDNYTIE
                     RARLFAANNPHSNLVRIEYDRFGEEYLFFIKGWDNHQAQRLPSPLFIPGLPLAPIWHE
                     FIILSFIIIVGLLMAYILAGNIAKPIRILGNGMDRVANGELETRISQQVDDRDDELSH
                     LAIQFDKMAEKLEKLVAKERYLLHHVSHEMRSPLARMQAIVGLIQAQPQKREQYLKRL
                     EGELTRMDTLAGELLTLSRLETSNMALEKESLKLLPFLGNLVEDNQSIAQKNGQTVAL
                     SADGKIPENTTILANESYLYRAFDNVIRNAVNYSPEGSTILINIGQDHKHWIIDVTDN
                     GPGVDEMQLPHIFTAFYRADSSANKPGTGLGLALTQHIIEQHCGKIIAENIKPNGLRM
                     RFILPKKKTGFKTEKSAN"
     gene            9022..11446
                     /locus_tag="ACFJAG_001185"
                     /pseudo
     CDS             9022..11446
                     /locus_tag="ACFJAG_001185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232124.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
     gene            11491..11736
                     /gene="rpsP"
                     /locus_tag="ACFJAG_001186"
     CDS             11491..11736
                     /gene="rpsP"
                     /locus_tag="ACFJAG_001186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HFC3980470.1"
                     /translation="MVVIRLARGGSKHRPFYNVIVTDSRSRRDGRFIERVGFYNPVAN
                     EKQERVRLNADRLNHWIAQGAQVSDSVAKLIKEQKAV"
     gene            11752..12261
                     /gene="rimM"
                     /locus_tag="ACFJAG_001187"
     CDS             11752..12261
                     /gene="rimM"
                     /locus_tag="ACFJAG_001187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003748672.1"
                     /note="Essential for efficient processing of 16S rRNA;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HFC3980471.1"
                     /translation="MTDAQNRVAMGYIKGVFGIKGWLKIAANTEYSDSLLDYPEWHLA
                     KDGKTVSVTLEAGKVVNGELQVKFEGIDDRDSAFSLRGYTIEIPREAFAPTEEDEYYW
                     ADLVGMTVVNKDDTVLGKVSNLMETGANDVLMIDGEHGQILIPFVSQYIETVDTGSKT
                     ITADWGLDY"
     gene            12261..13010
                     /gene="trmD"
                     /locus_tag="ACFJAG_001188"
     CDS             12261..13010
                     /gene="trmD"
                     /locus_tag="ACFJAG_001188"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052906 - tRNA
                     (guanine(37)-N1)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HFC3980472.1"
                     /translation="MLIQAVTIFPEMFDSITRYGVTGRANRQGIWQFEAVNPRKFADN
                     RLGYIDDRPFGGGPGMIMMAPPLHAAIEHAKAQSSQTAKVIYLSPQGKPLTHQKAAEL
                     AELTHLILLCGRYEGIDERLLQSSVDEEISIGDFVVSGGELPAMMLMDAVLRLVPGIL
                     GDIQSAEQDSFSSGILDCPHYTKPLEFQGMAVPEVLRSGNHGLIAEWRLEQSLRRTLE
                     RRPDLLEKRVLIPKESRLLNKILQEQREIQS"
     gene            13025..13390
                     /gene="rplS"
                     /locus_tag="ACFJAG_001189"
     CDS             13025..13390
                     /gene="rplS"
                     /locus_tag="ACFJAG_001189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HFC3980473.1"
                     /translation="MNLIQQLEQEEIARLNKEIPEFAPGDTVVVSVRVVEGTRSRLQA
                     YEGVVIARRNRGLNSNFIVRKISSGEGVERTFQLYSPTVEKIEVKRRGDVRRAKLYYL
                     RGLTGKAARIKEKLPARKG"
     gene            13711..14436
                     /locus_tag="ACFJAG_001190"
     CDS             13711..14436
                     /locus_tag="ACFJAG_001190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010361246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HFC3980474.1"
                     /translation="MSIIVENLTVSYRRRPAVHHVDITFEEHSMWAVFGPNGAGKSTF
                     LKSLMGLQPIDTGSIRLDGLTRQNIAYLPQQSDIDRSQPMTVFDLAAMGLWYEIGFFK
                     GINTAQKQRVHEALERVGMRQFARRQIAHLSNGQFQRVLFARMLVQNAKFLLLDEPFN
                     AVDARTTYELLDVLQKCHCGGHAIIAVLHDYEQVRAYFPNTLLLAREKIAAGATETIL
                     TESYLAQASAKMQQQESPDWCAS"
     gene            14471..15346
                     /locus_tag="ACFJAG_001191"
     CDS             14471..15346
                     /locus_tag="ACFJAG_001191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HFC3980475.1"
                     /translation="MNLYDLLLAPFAEFDFMHYALASVFCLSLSAAPVGVFLVMRRMS
                     LIGDALSHAVLPGAAVGYMFAGLSLPAMGVGGFAAGMLMALLAGLVSRFTTLKEDANF
                     AAFYLSSLAIGVILISKNGSSVDLLHLLFGSVLAVDIPALQLIAAVSGLTLITLAVIY
                     RPLVLESIDPLFLKSVNGKGGLWHVVFLILVVMNLVSGFQALGILMSVGLMMLPAITA
                     RLWARNMGTLILLSVLIALFCGLIGLLISYHIEIPSGPAIILCCSVLYLFSVILGKEG
                     GILPKWFKNHRHHTT"
     gene            15423..16337
                     /locus_tag="ACFJAG_001192"
     CDS             15423..16337
                     /locus_tag="ACFJAG_001192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein"
                     /protein_id="HFC3980476.1"
                     /translation="MKHLKLTLIAALLATAATAAPLPVVTSFSILGDVAKQIGGERVA
                     VQSLVGANQDTHAYHMTSGDIKKIRSAKLVLLNGLGLEAADIQRAVKQSKVSYAEATK
                     GIQPLKAEEEGGHHHDHDHDHEGHHHDHGEYDPHVWNDPVLMSDYAQNVAEALIKADP
                     EGKVYYQQRLGNYQMQLKKLHSDAQAAFNAVPAAKRKVLTGHDAFSYMGNRYNISFIA
                     PQGVSSEAEPSAKQVAAIIRQIKREGIKAVFTENIKDTRMVDRIAKETGVNVSGKLYS
                     DALGNAPADTYIGMYRHNVKALTNAMKQ"
     gene            16557..17423
                     /locus_tag="ACFJAG_001193"
     CDS             16557..17423
                     /locus_tag="ACFJAG_001193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="meta-pathway of phenol degradation family
                     protein"
                     /protein_id="HFC3980477.1"
                     /translation="MKNILLVFVSFVPLCVRTDLPLNIEDIMTDKGKWKLETSLTYLN
                     SENSRAALASPVYIQTGSASFIPVPTEIQENGSNTDMLAGTLGLRYGLTGNTDIYGSG
                     SYLWHEERKLDGNGKTRNKRMSDISAGISHTFLKDGKNPALIAFLESTVYEKSRNKAS
                     SGKSWLIGATTYKAIDPIVLSLTAAYRINGSKTLSDDVKYKAGNYWMLNPNISFAAND
                     RISLTGGIQWLGKQPDRIDGKKESARNTSTYAHFGAGFGFTKTAALNASARFNVSGQS
                     SSELKLGVQHTF"
     gene            17466..18005
                     /locus_tag="ACFJAG_001194"
     CDS             17466..18005
                     /locus_tag="ACFJAG_001194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980478.1"
                     /translation="MKKQITAAVMMLSMIAPAMANGLDNQAFEDQVFHTRADAPMQLA
                     ELSQKEMKETEGAFLPLAILGGAAIGMWTQHGFSYATTGRPASVRDVAGGLGAIPGDV
                     GAAGKVVSFAKYGREIKIGNNMRIAPFGNRTGHPIGKFPHYHRRVTDNTGKTLPGQGI
                     GRHRPWESKSTDRSWKNRF"
     gene            17987..18352
                     /locus_tag="ACFJAG_001195"
     CDS             17987..18352
                     /locus_tag="ACFJAG_001195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980479.1"
                     /translation="MEKPLLTPPFFLFEDVSLDIFQGLSELEKKIEPQDLMDDVYRAF
                     DSVGNILNFRIVEKEQKGFWVSTKIKTVVFDSADMPSDDLFLKCLQSSYKAYSETEPA
                     GLDKRQLMKTLIQKCGFSC"
BASE COUNT         4872 a         5739 c         4088 g         3809 t
ORIGIN      
        1 gagggaaggg aattttgcaa aggtctcagt ttgtagtaaa atatctaaac agattcaatc
       61 ggaaacggtc aggcttcttc acgccattcc catttcaacc gccgcctgct agattcagac
      121 ggcattccta cttgaaaaca aggagcgtta caatgaaagc agcacgtttt tacaacaaag
      181 gcgacatccg catcgaagac atccccgaac cgaccgtcgc ccccggcacc gtcggcatca
      241 atgtcgcctg gtgcggcatc tgcggtaccg acctgcacga atttatggaa ggcccgattt
      301 tcatcccgcc ctgcggtcat ccgcatccga tttccggcga gtccgcgccc gtaacgatgg
      361 gacacgagtt ctccggcgtg gtttatgccg tcggcgaagg cgtggacgac attaaagtcg
      421 gccaacacgt cgtggtcgaa ccctacatca tccgcgacga cgtaccgacc ggcgaaggca
      481 gcaactacca cctctccaaa gacatgaact ttatcggctt gggcggctgc ggcggcggcc
      541 tgtccgaaaa aatcgccgtc aaacgccgtt gggtgcatcc gatttccgac aaaatcccgt
      601 tggatcaagc tgctttgatt gaacctctgt ctgtcggaca ccacgcctat gtacgcagcg
      661 gcgcgaaagc aggcgatgtc gcattggtcg gcggcgcagg cccgatcggt ttgctgttgg
      721 ccgccgtgtt gaaagccaaa ggcatcagag tcatcattac cgagttgagt aaagcacgca
      781 aagacaaagc ccgcgaatcc ggcgttgccg actacatcct cgacccgtcc gaagtcgatg
      841 ttgttgaaga agtgaaaaaa ctgaccaacg gcgaaggcgt ggacgtggcg ttcgaatgta
      901 ccagcgtgaa caaagtgttg gatactttgg tcgaagcctg caaacccgcc gccaacttgg
      961 ttatcgtatc catctggagc caccccgcca ccgtcaacgt ccacagcgtc gtgatgaaag
     1021 aactggatgt gcgcggcacg attgcctact gcaacgacca cgcggaaacc atcaaactgg
     1081 tcgaagaagg caaaatcaac ctcgaaccct tcatcaccca gcgcatcaag ctggacaaac
     1141 tggtttccga aggcttcgag cgtctgatcc acaacaacga atccgccgtt aaaattattg
     1201 tgaatccaaa cctgtaagca aattacattt gcaacagcac aaatgccgtc tgaaacgctc
     1261 agacggcatt ttccaacgaa acgcaacagg cgtattgccc gagagcagcc gtttagccta
     1321 tcattccgaa caaacagaaa caaacagaag gaaaatcatg ggagattccg tactatccgc
     1381 catccaacaa accattatac agcgcaaatc tgccgacccg tccgaatctt acgtcgcaca
     1441 gctcctgcac aagggcgagg acaaaatcct aaaaaaagtg attgaagaag cgggcgaagt
     1501 gttgatggca tccaaagaca aagacccgtc ccacctggtt tacgaagttg ccgacttatg
     1561 gttccacacc atgattcttc tgacacacca cgacctgaag gcggaagacg tattggacga
     1621 actttcccgc cgtcaggggc tgtcggggct ggccgaaaaa gccgcccgta cagaatcctg
     1681 aatttatatt acaatctcat cccttccacg tttaatccgt ctgcgtgctt ttttcagacg
     1741 gcaacggagc cgttatggac aactgtattt tctgcaaaat cgccgccaaa gagattccgg
     1801 cgcaaaccgt ctatgaagac ggcgaaatgg tttgtttcaa agacatcaac cccgccgctc
     1861 cgcttcatct gctgctgatt cccaaagtcc attttgattc gttggcacac gccgcgcccg
     1921 aacatcagcc ccttttggga aaaatgatgc tgaaagttcc cgaaatcgcc aaagcttcgg
     1981 gactgaccga cggtttcaaa acccttatca ataccggcaa aggcggcgga caagaggtct
     2041 tccacctgca tatacacatc atgggcacac ccgtataaac cgttatttca caatcaaccc
     2101 ctaatactta cttaaggata catcatgggc agtttttctc tgacgcactg gattatcgta
     2161 ctgattatcg tcgttttgat attcggcacc aaaaaactgc gcaacgtcgg caaagacctc
     2221 ggcggtgcgg ttcatgactt caaacagggg ctgaacgaag gcacagacgg caaagaagcc
     2281 caaaaagacg atgtaatcga acacaaaaaa gacgaagaca aagcataact tatgtttgat
     2341 ttcggtttgg gcgagctgat ttttgtcggc attatcgccc tgattgtcct tggtccagaa
     2401 cgcctgcccg aagccgcccg caccgccgga cggctcatcg gcaggctgca acgctttgta
     2461 ggaagcgtca aacaagaatt tgacactcaa atcgaactgg aagagctgag gaaggtcaag
     2521 caggcattcg aagctgccgc cgctcaggtt cgagacagcc tcaaagaaac cgatacggat
     2581 atgcagaaca gtctgcacga catttccgac ggtctgaagc cttgggaaaa actgcccgaa
     2641 cagcgcacgc ctgccgattt cggtgtcgat gaaaacggca atccccttcc cgatacggca
     2701 aacaccgtat cagacggcat ttccgacgtt atgccgtctg aacgttccga tacttccgcc
     2761 gaaacccttg gggacgacag gcaaaccggc agtacagccg aacctgcgga aaccgacaaa
     2821 gaccgcgcat ggcgggaata cctgactgct tctgccgccg cacctgtcgt acaggccgtc
     2881 gaagtcagct atatcgatac tgctgttgaa acgcctgttc cgcacaccac ttccctgcgc
     2941 aaacaggcaa taaaccgcaa acgcgatttt cgtccgaaac accgcgccaa accgaaattg
     3001 cgcgtccgta aatcataaag ggggcatccg gtgtccgaaa cacaaaacga acaaaccgtc
     3061 caaccgcttg tcgaacacct catcgagctg cgccgccgcc tgatgtggat ggttgtcggc
     3121 attctcgtct gctttttcgg catgatgccg tttgcccagc agctctatac ttttatcgcc
     3181 gacccgctga tggcaaacct gcccaaagac accagtatga ttgcgaccga tgtcatcgca
     3241 ccgtttttcg ttccggtcaa agttaccctg atggcggcgt ttttggtttc actgccgcat
     3301 acgctctacc aaatctgggc attcgtcgcc cccgcactct accaaaacga aaaacgcctg
     3361 attacgccgc tcgtcctctc cagcgtcagc ctgtttttca tcggcatggc atttgcctat
     3421 ttcctggttt tccccgtcat tttcaaattc cttgccggcg taacccccgt cggggtcaat
     3481 atggcgaccg acatagacaa atacctgtcc tttatcttag gtatgttcgt tgcgttcggc
     3541 acggcatttg aagtgcccat cgtcgtcatc ctgttaacca aaatcggcgc agtcacgacc
     3601 gagcagctca aacacgcccg gccttatgtc attgtcggcg cgtttgtcgt tgccgcagtc
     3661 atcacgccgc ccgacattat ttctcagacc ctgcttgcca ttccgctgat cctcttatac
     3721 gaggcgggca tttggttcgg acgcttcttc actccacgtt cagaacagga tggcgacata
     3781 cagccgcctg caaaaacctg acactatgcc gtctgaagcc ccgccgcaca ttaaggagca
     3841 caccgtgaac accctttact taggttcggg cagcccgcgc cggatggaaa tcctgacaca
     3901 gttgggctat cgggtcgtca agctgcccgc cggcatcgac gaaaccgtta aagccggcga
     3961 aacgcccgcc ccttacgtcc aaaggatggc ggaagaaaaa aatcaggcgg ctttgaccct
     4021 cttttgcgaa accaacggcg caatgcccga tttccccctg attaccgccg acacctgcgt
     4081 cttttcagac ggcatcatat tgggcaaacc tcgctcccaa gccgaagcaa tcgaattttt
     4141 aaaccgattg tccggcaaac aacataccgt cctgactgct gtctgcattc attatcgcgg
     4201 caaaacgtca agccgcgtcc aaaccaaccg cgtcgttttc aagcccctga gttcggaaga
     4261 aatttccgcc tatgtgcaaa gcggcgaacc gatggagaaa gccggtgcct acgccgtgca
     4321 aggcataggc ggtatcttta tccaatctat cgaaggcagc ttcagcggca ttatggggct
     4381 gcccgtttat gaaaccgttt ccatgttgca ggatttggga taccgccccc cttatccgcc
     4441 cttaaaccgt aaagtccgcc gtgaacagac aaaccgctta cttccttgcc tccttcagcc
     4501 tgattgcact gattgcccta tccctttctt gggaattatg gattgcaccg ttacgcccgg
     4561 gcggttcgtg gctcgcgctc aaagccctgc ccctctgcct gccgctttca ggtattctaa
     4621 agaaaaaaat ctatacctac caatacagct ccatgctggt tctgatttac tttgccgaag
     4681 ccgtcatgcg cctgttcaac gcctatcccg cagaaaaaat ttgcgccgcg ctttccgcag
     4741 tattcagcat catcttcttc atatcctgcc tgtcgttcgt caaacaatac aaggaaacaa
     4801 acaatgtccg ctgaaacgac cgtatccggc gcgcgccccg ccgccaaact gccgatttac
     4861 atcctgccct gcttcctttg gataggcatc atccccttta ccttcgcact caggctgaaa
     4921 ccgtcgcccg acttttacca cgatgccgcc gccgcggccg gcctgattgt cctgttgttc
     4981 ctcacggcag gaaaaaagct gtttgatgtc aaaatccccg ccatcagctt cctcctgttt
     5041 gcaatggcgg cattttggtg gcttcaggca cgcctgatga acctgattta tcccggaatg
     5101 aacgacatcg cctcttgggt tttcatcttg ctcgccgtca gcgcgtgggc ctgcaagagt
     5161 ttggtcgcac actacggaca agaacgcatc gttaccctgt ttgcctggtc gctgcttatc
     5221 ggctccctgc ttcaatcctg catcgtcgtc atccagtttg ccggctggga aaacaccccc
     5281 ctgcttcaaa acatcatcgt tcacagaggg caaggcgtaa tcggacacat cgggcagcgc
     5341 aacaacctcg gacactacct catgtggggc atactcgcct ccgcctacct caacggacaa
     5401 cgaaaaatcc ccgcagccct cggcgcaatc tgcctgatta tgcagaccgc cgttttaggt
     5461 ttggtcaatt cgcgcaccat cttgacctac atagccgcca tcgccctcat ccttcccttc
     5521 tggtatttcc gttcggacaa atccaacaga cggacgatgc tcggcatagc cgcagccgta
     5581 ttccttaccg cgctgttcca attttccatg aacgccattc tggaaacctt tacaggcatc
     5641 cgctacgaaa ctgccgtcga acgcgtcgcc aacggcggtt tcacagactt gccgcgccaa
     5701 agcgaatgga ataaagccct tgccgccttc cagtccgccc cgatattcgg gcacggctgg
     5761 aacagttttg cccaacaaac cttcctgatc aatgccgaac agcacaccat acacgacaac
     5821 ttcctcagca ccttgttcac ccattcccac aacatcatcc tccaactcct tgcagaaatg
     5881 gggatcagcg gcacgcttct ggttgccgca accctgctga cgggcattgc cgggctgctg
     5941 aaacgctccc tgacccccgc atcacttttc ctgctgtgcg cgcttgccgt cagtatgtgc
     6001 cacagtatgc tcgaatatcc tttgtggtat gtctatttcc tcatcccctt cggactgatg
     6061 ctctttctgt cccccgcaga ggcttcagac ggcatcgcct tcaaaaaagc cgccaatctc
     6121 ggcatactga ccgcctccgc cgccatattc gcaggattgc tgcacttgga ctggacatac
     6181 acccggctgg ttaactcctt ttcccccgcc gctgacgaca gtgccaaaac tctcaaccgg
     6241 aaaatcaacg aactgcgcta tatttccgca aacatcccga tgctgtcctt ttatgccgac
     6301 ttctccctcg taaacttcgc cctgccggaa taccccgaaa cccagacttg ggcggaagaa
     6361 gcaaccctca aagcactaaa ataccgcccc tactccgcca cctaccgcat cgccctctac
     6421 ttgatgcggc aaggcaaagt tgcagaagca aaacaatgga tgcgggcaac acagtcctat
     6481 tacccctacc tgatgccccg atacgccgac gaaatccgca aactgcccgt atgggcaccg
     6541 ctgctgcccg aactgctcaa agactgcaaa gccttcgccg ccgcgcccgg ccatccggaa
     6601 acaaaaccct gcaaacgacc cgcgtcggcg gatgcggata ccgcccgaaa tgtaaagctc
     6661 catgcaagac attgcaaaaa acagcaaacc ggtagggaaa tacgctatca aaaaacattg
     6721 cagccgtgtt aagataaact gtcaaacaat cttttcacgc cacgcccgaa acagggtcgg
     6781 ggcataccct tacgaaaagg aaacaccatg agccgcgtat tactcgtaga tgacgatgcc
     6841 ctgctgaccg aactgctgac cgaatacctg agcgccgaag gtctgaacgt ccgcagcgtt
     6901 cccgacgggg aagcaggcgt acaggaaatc ctgagcgggc aatacgatgt agtcgtattg
     6961 gattccatga tgcccaaaat gaacggcttg gatgtcttga aaaacgtacg cgcccgaagc
     7021 accgtcccca tcatcatgct gaccgccaaa ggcgacgaca tcgaccgaat catcggcttg
     7081 gaaatgggtg cggacgacta tgtccccaaa ccctgcacac cacgcgaact cttggcacgc
     7141 atcaatgcca tcctccgccg agcacaacac agcggcgaac agaacaacgc acccaacagc
     7201 atctccgtca gcgatgtcgt cctatacccc gccaaacgcc aggcatccgt caaagacatg
     7261 ccgctcgaac tgaccagcac cgaattcaac ctgctcgaag tcctgatgcg ccatgccgga
     7321 caggtagtca gcaaagaaac cctgtccgtc gaagcactcg accgcaaact ggcaaaattc
     7381 gaccgcagta tcgacgtaca catctccagc atccgccaca agctgggcga tgcctccctg
     7441 attcaaaccg tacgcggctt gggctacctg tttgtcaaaa actgaagcag cgggcaaatg
     7501 aaactgttcc aacgcatttt cgccacattt tgcgcggtta tcgtctgcgc aatctttgtg
     7561 gcgagttttt ctttttggct ggtgcagaac acccttgccg aaaaccaatt caaccaacgc
     7621 cgcaccatcg aaaccacatt gatgggcagc attatttccg cattcaagac acggggcgac
     7681 aacggcgcgc gcgaaatcct gaccgaatgg aaaaacagcc ccgtctcatc cgccgtttac
     7741 gtcatacagg gcgacgagaa aaaagacatc ttaaaccgct atatcgacaa ttacaccata
     7801 gaacgcgccc ggctgtttgc cgccaacaac ccccattcca accttgtccg catcgaatac
     7861 gaccgtttcg gcgaagaata cctgttcttc attaaaggct gggacaacca ccaggcacaa
     7921 cgcctgccca gcccgctgtt tatcccgggc ctgccgcttg ccccgatttg gcacgaattc
     7981 atcatcctct ccttcatcat cattgtcgga ctgctgatgg catatatcct tgccggcaac
     8041 attgccaaac ccatcagaat cttaggcaac ggcatggaca gggtggcaaa cggagaactt
     8101 gaaacccgca tctcccaaca ggtcgacgac cgcgacgacg aattgtccca tcttgccatc
     8161 caattcgaca aaatggcgga aaaactcgaa aaacttgtcg ccaaagaacg ttacctactc
     8221 caccacgttt cccacgaaat gcgctccccg cttgcccgta tgcaggcaat tgtcggactg
     8281 attcaggcac agccccaaaa acgggagcaa tatctcaaac ggctggaagg cgaactgacc
     8341 cgcatggata cgctggccgg ggaactgtta accctgtccc gcctcgaaac ctccaatatg
     8401 gctttggaaa aagaaagcct gaaactcctg cccttcctgg gcaacctggt agaagacaac
     8461 caaagtatcg cccaaaagaa cggacagacg gtcgccctgt ctgccgacgg aaaaatcccc
     8521 gaaaacacaa ccatccttgc caacgaaagc tacctgtacc gcgccttcga caacgtcatc
     8581 cgcaacgccg tcaactacag ccccgaaggc agcaccatcc tgatcaacat cggacaagac
     8641 cacaaacact ggataatcga cgttaccgac aacggccccg gcgtggacga aatgcagctc
     8701 ccgcacatct tcaccgcttt ctaccgtgca gactccagcg ccaacaaacc cggaacagga
     8761 ctggggcttg cattgaccca acatattatt gaacagcact gcggcaaaat catcgccgaa
     8821 aacatcaaac cgaacggtct gcggatgcgc tttatcctgc ccaagaaaaa aaccggtttc
     8881 aaaacagaaa aaagtgcgaa ctgaccataa tgccgtctga acccgcttca gacggcattg
     8941 cacaaacagt taccccaaaa caaacacaca gcgggtgcat ctccaaaaat cacgcacata
     9001 ccgtccgcaa aggaatatat catgccggca caaaccgatc cgggctactt cttcatgccc
     9061 aaccacatta tcctgatagg cgcgagcgaa caaccgtaca gcctgggtga acgcgtactc
     9121 agcaacctgc tgagtacgcc ctttcaagga aaaatcaccc ccgtaaaccc gcgccaccac
     9181 accatagccg ggcttcccgc ctacaccagc ctcaacaaaa tccccggcag tgcagacctg
     9241 attattgccg ttaccccgcc cgacagttac gacaccctcc tcaaaacctg ccgtaaaaag
     9301 cagctccgac acatcatcct catacaggac tgggacagcc tgtctgccgc agaactgcac
     9361 acaccgccga aactgccatc cgcaaacacc acggcaacgg actcaacatc accgcctgca
     9421 ccaccgcagg catccaactg ccctcactcg gactcaacat cagtacccaa gacggatatg
     9481 ccgcaggcca taccgccata ctgaccggca atgccgccgt cagccgccaa atcgacaaca
     9541 tcctgaacaa actccgtcaa ggcacatccc gccacatcag cctgcatccc ggcatcagcc
     9601 ccatcacatc cgccgattgg ctcaaccgct tcggacacag cctgcacacc aaaaccgccg
     9661 tcctacacca caaccctgaa gaggatcagc gcaggctgtt cagcgcaatc cgccaattta
     9721 cccgccatac gccgctgatt ctccacatca cctgcctcac gacagaaacc gaccgtgccg
     9781 tactgcactg cctcgcccga cactgcaact tcctcatcag tttcaacgcc gacgacctcg
     9841 aagccgcact gagcgcccaa ctgtccgacc ttccacccct gtcccgactc gacatcctgt
     9901 ccgacacgcc tgccgaatgg ctgcacgcgc acgcaccaaa aaaccccacc ctccactttc
     9961 ccaaccttcc ccaccacatc cgcaacggac acctgaccgg cacacccaca ccctcaatct
    10021 gccacgacat cgcctcacgt cagcttgccc gcccgacacc caagccgtcc tgaccatcct
    10081 cggtccctcc ggacacgagg attacaaaaa aacagcacgc gcccttatcc gcctgtccga
    10141 acagaccgcc aaacccctgc tcgtcagcag ccccttttca gacggcataa cacatttcga
    10201 cacccccgca caggcaatcc gcaccctttc ctaccgtaac accgccgccg ccctgaaaca
    10261 ggcacagctc gacattgcac cgccgcagcc atgccgtctg aaaacaccgc aaccccaaaa
    10321 catcaaaaaa gcccttgcag cggcaaatcc cgccctgctc gccgaagccc tgcacctccc
    10381 cctaccggca caccacccat aacgccgtcc aattccaatt cggcagccac cccctctatg
    10441 gcgacatcct gaccgcacgc tgcaacggac aaaccactgc cgtactcccg ccgtttacca
    10501 cgctcgacag ccgccacctt gcccgctttg ccgaactcga cggcacacaa accctcgacc
    10561 agttcctgca cacactgacc gtcatccccg aataccgcca acacattttc ggcatcaccc
    10621 tcaacctcaa cggcggacaa tacagcagcg atttcatctt aaagacaccc ggaacacacg
    10681 acacgcccaa acgcaagaac acaggcaaag ccgcccaaac cctcgaacat gccgccgcaa
    10741 aaatgcagag tgccgccgca tacctggaac acaaaaaccc gacagccgcc gaatttctcc
    10801 gccacacaag cgaagccgcc gcagaactgc tcggcagcaa aaccgaaacc ggagcagccg
    10861 tacccaacgt acttgccccc tatcccgcag cacaccccaa aacactgtcc ctaaaaaaca
    10921 acacgaccgt taccattatc ccccttttac ccgaagacgc agaagccaaa cagcagttcg
    10981 tccgcagcct cggccccgaa gcacggtaca cacgcttcat gacccacacc aacgaactgc
    11041 ccgcagccac gttggcacgc ctgtgcaacc ccgattacca ctgtgaaccg catggacggc
    11101 aagggatgcc gacagcaaca tcgtcgccgt cgtccgccac agccgcctga accgcaacga
    11161 atgcgaattt ggcatcacac tggcggaaca tatgcgcggc agcgggctgg cacagaaaat
    11221 gatggaactc atcatccaaa ccgccgcaca gcaaggctac ctgagcatga gtgccgacat
    11281 tctcaaaacc aataccccca tgatcaaact tgctgaaaaa tcaggattta ccctcaagga
    11341 atcggacacc gaaaaaaacc tgtaccgcgc atatctgaac cttgcggcag acaaaacaac
    11401 aggaaaaaca aataaaaact tgcgcaccgg ccacaaaata acctaaaatc ggcagtttcc
    11461 atatatccga ttttctcaaa aggactcaaa atggtagtta tccgtttggc acgcggcggc
    11521 tcgaaacacc gccccttcta caacgtcatc gttactgact cacgcagccg ccgcgacggc
    11581 cgcttcatcg aacgcgtagg cttctacaac cccgtagcca acgaaaaaca agagcgcgtc
    11641 cgcctcaatg cagaccgcct gaaccactgg attgcacaag gcgcgcaagt cagcgactcc
    11701 gttgcaaaac tgattaaaga acaaaaagcc gtctaatccg cgtttgccgc catgacagac
    11761 gctcaaaacc gggtagccat gggctacatc aaaggcgtat tcggcataaa aggctggctg
    11821 aaaattgccg ccaacaccga atattccgac agccttttgg actaccccga gtggcatttg
    11881 gccaaggacg gcaaaaccgt cagcgttacc cttgaagccg gaaaagtcgt caacggcgaa
    11941 ctccaagtca aattcgaagg catagacgac cgcgattcag cattctcatt gcgcggttac
    12001 accatcgaaa taccccgtga agcattcgcc ccgacagaag aagacgaata ctactgggca
    12061 gacttggtcg gcatgaccgt cgtcaacaaa gacgataccg ttttaggcaa ggtaagcaac
    12121 ctgatggaaa ccggcgcaaa cgacgtattg atgattgacg gagaacacgg gcagattctg
    12181 attccgttcg tttcccaata tatcgaaacc gtcgataccg gcagcaagac cattactgcc
    12241 gactggggtt tggactactg atgcttatcc aggcagttac cattttcccc gaaatgttcg
    12301 acagcattac ccgctacggc gtaacgggac gcgcgaacag acagggaatc tggcagtttg
    12361 aagcagtcaa tccccgaaag tttgccgaca acagattggg ctatatcgac gaccgcccgt
    12421 tcggcggcgg tccgggaatg attatgatgg ctccgccgct tcatgcggcg atagaacacg
    12481 ccaaagcaca atcttcccaa accgcaaaag tcatctacct cagcccccaa ggaaaaccgc
    12541 tgacacacca aaaagcggca gaactggcag aacttacgca tctgattctg ctgtgcggac
    12601 gctatgaggg aatagacgaa agactgctgc aaagcagcgt cgatgaagaa atcagcatcg
    12661 gagacttcgt cgtttccggc ggagagcttc ccgccatgat gctgatggat gcggtattga
    12721 ggctcgtacc cggcatattg ggcgacattc agtctgccga acaggattcg ttctcaagcg
    12781 gtattttgga ctgcccccac tacaccaaac ccttagaatt tcaaggcatg gctgttccgg
    12841 aagtattgcg ctccggaaat catggcttga tagcggaatg gcggttggaa caatcgctgc
    12901 gccgcacctt ggagcgcaga cccgatcttt tggaaaagcg cgttttaatc ccaaaggaat
    12961 cccgcctctt gaataaaatc ctacaagagc aacgggaaat ccaatcataa tttaggaaaa
    13021 aacaatgaac ctgattcaac agctcgagca agaagaaatt gcccgcctga acaaagaaat
    13081 ccccgaattc gcaccgggcg acaccgtagt cgtatccgta cgcgtcgtgg aaggtacccg
    13141 cagccgtctg caagcctacg aaggcgtggt tatcgcccgt cgcaaccgtg gtttgaacag
    13201 caacttcatc gtccgcaaaa tctccagcgg cgaaggtgtt gaacgtactt tccaactata
    13261 ttcccctact gttgagaaaa tcgaagtcaa acgccgtggc gacgtacgcc gtgccaaact
    13321 gtactacctg cgcggtctga ccggcaaagc tgcacgcatc aaagaaaaac tgcctgcacg
    13381 caaaggttga ttcaaaccgt tttcccccaa tgccgtctga acgttcagac ggcatttttt
    13441 attgccgcga tgccggcaag gcaacgatat gcctgaccct catccacctt aattaacaat
    13501 cactcccgcc tattcaagca gaatttacag actaaacgtt atacagtatc atatccgcca
    13561 tataacgata accgctttgc caacttccct ttcaaaactg caaatcatta tgacaccttc
    13621 cctcttactg tcaggattga ccttccgact cttcctcgcc ctgattgccg tattcctttt
    13681 atggggtgtt tacctttggg cggtatcggt atgagcatca tcgttgaaaa cctgacggtc
    13741 agctaccgcc gccgccccgc cgtacaccac gtcgacatta cttttgaaga acatagtatg
    13801 tgggcggttt tcggtcccaa cggcgcagga aaatctacct ttctcaaatc cttaatggga
    13861 ttgcagccta tcgatacggg cagcatccgg ctggacggat tgacccgtca aaacattgcc
    13921 tatctccccc aacaatccga catcgaccgt tcccagccta tgaccgtttt cgacttggcg
    13981 gcaatggggc tgtggtatga aatcggtttt ttcaaaggga taaataccgc tcaaaaacaa
    14041 cgcgttcacg aagccttgga gcgtgtcggt atgcggcagt ttgcccgccg ccaaatcgcc
    14101 cacctctcaa acggacaatt ccaacgcgtc cttttcgccc ggatgctggt tcaaaatgca
    14161 aaattcctgc ttttggacga acctttcaat gctgttgatg cacggacaac ctacgagctt
    14221 ctcgacgtgt tgcaaaaatg ccattgcggc ggacacgcta tcattgccgt tttgcacgat
    14281 tacgaacaag tccgtgccta ctttcccaat accctgctgc tcgcccgcga aaaaattgcg
    14341 gcaggcgcaa ccgagaccat tctgacagaa tcctacctcg cccaagccag cgccaaaatg
    14401 cagcaacagg aaagccccga ctggtgcgcc tcataaatac tgcccgaaac cacgccccac
    14461 accagacacc atgaacctct acgacctgct ccttgccccc tttgcagaat tcgacttcat
    14521 gcactacgcc ctcgcatccg tcttctgcct gtccctcagc gccgcacccg tcggcgtatt
    14581 cctcgtcatg cgccgtatga gcctgatagg cgacgcattg agccacgccg tcctgcccgg
    14641 tgccgccgtc ggctacatgt ttgccggctt gagcctgccc gctatgggtg tgggcgggtt
    14701 tgccgccggt atgctgatgg cgctgcttgc cggactcgtc agccgcttta ccaccctgaa
    14761 agaagatgcc aactttgccg ccttttacct gagcagcctc gccatcggcg taatcctcat
    14821 cagcaaaaac ggcagcagcg tcgatttact ccacctcctt ttcggatctg tgcttgccgt
    14881 cgatattccc gcactgcaac tcatcgccgc cgtctccggc ctcacgctca ttacccttgc
    14941 cgtcatctac cgccccctgg tgctagaaag catagacccc ctgttcctca agtccgtcaa
    15001 cggcaaaggc gggctttggc acgtcgtttt cctcatcctc gtcgttatga acctcgtatc
    15061 cggcttccaa gctctcggca tcctgatgtc ggtcggactt atgatgctgc ccgccattac
    15121 cgcccgctta tgggcaagaa atatggggac gctcattctg ttgtccgtcc tcatcgccct
    15181 tttttgcggt ttgatcgggc tgctcatttc ctaccacatc gaaatccctt ccggccccgc
    15241 catcatcctc tgttgcagcg tcctttatct cttttccgtc atactcggca aagaaggcgg
    15301 catcttgccc aaatggttca aaaaccaccg ccaccacacc acctgacccc gcaagccgct
    15361 tgaacaaaca ggcggcttgt tttaccataa tgaatgttat gttatatcac aggaaaacag
    15421 ttatgaaaca cctcaaactt acccttattg ccgcattgct ggccaccgcc gcaactgccg
    15481 caccccttcc ggttgtaacc agtttcagca ttttaggcga cgtagccaaa caaatcggcg
    15541 gtgagcgcgt agccgtacaa agcctcgtcg gagccaacca agatactcat gcctatcaca
    15601 tgaccagtgg cgacattaaa aaaatccgca gtgcaaaact cgtcctgctc aacggcttgg
    15661 gacttgaagc cgccgacatc caacgcgccg tcaaacagag caaagtatcc tatgccgaag
    15721 cgaccaaagg catccaaccc ctcaaagccg aagaagaagg cggacaccat cacgaccacg
    15781 atcatgacca cgaaggacac caccacgacc acggcgaata tgacccccac gtctggaacg
    15841 accctgttct tatgtccgac tatgcccaaa acgtcgctga agccctgata aaggccgatc
    15901 ccgaaggcaa agtttattat caacaacgct tgggcaacta ccaaatgcag cttaaaaaac
    15961 tgcacagcga cgcacaagcc gcatttaatg ccgtccctgc cgccaaacgc aaagtcctga
    16021 ccgggcacga cgcattttcc tacatgggca accgctacaa catcagcttc atcgccccgc
    16081 aaggcgtgag cagcgaagcc gagccgtccg ccaaacaagt cgccgccatc atccggcaaa
    16141 tcaaacgcga aggcatcaaa gccgtattta ccgaaaatat caaagacacc cgcatggttg
    16201 accgcatcgc caaagaaacc ggcgtcaacg tcagcggcaa actgtattcc gacgcactcg
    16261 gcaacgcgcc cgcagacacc tacatcggca tgtaccgcca caacgtcaaa gccttgacca
    16321 acgcgatgaa gcaataaaac cgtttgattg gtttgaattt gaaaaggcaa aaggccgtct
    16381 gaaaattaaa tacgaggttt tcagacggcc ttctcttgtg caataaagca gtaaacaaat
    16441 attgataaga aaaaaacaat cagtattgaa aatatcgtta aaaatattat ttagacagat
    16501 tacatggaat ttcattaaca tcagtagact ttgatttcaa tcaagaaaac aatgtcatga
    16561 aaaatattct cttagtattt gttagctttg tgccattatg tgtccgcact gatctgccgc
    16621 tgaatatcga agacataatg accgacaagg gaaaatggaa actggaaact tcccttacct
    16681 acctgaacag cgaaaacagc cgcgccgcac ttgcctcacc ggtttacatt cagaccggct
    16741 ccgcttcctt tatccccgtc ccgaccgaaa ttcaggaaaa cggcagcaat accgatatgc
    16801 tcgccggcac gctcggtttg cgctacggac tgaccggcaa taccgacatt tacggcagcg
    16861 gcagctatct gtggcacgaa gaacgcaaac tcgacggcaa cggcaaaacc cgcaacaaac
    16921 ggatgtccga catatccgcc ggcatcagcc acaccttcct taaagacggc aaaaatcccg
    16981 cactcatcgc tttcctcgaa agcacggttt acgaaaaatc gcgcaacaaa gcctcgtcgg
    17041 gaaaatcgtg gctcatcggc gccaccacct acaaagccat agatccgatt gtcctttccc
    17101 tcaccgccgc ctaccgcatc aacggcagca aaaccctttc agacgacgtc aaatacaaag
    17161 caggcaatta ctggatgctg aatcccaaca tctcatttgc cgccaacgac agaatcagcc
    17221 tgaccggagg catccaatgg ctgggcaaac agcccgaccg catagacggc aaaaaagaat
    17281 ccgcaagaaa cacatccacc tacgcccatt tcggcgcagg tttcggtttc accaaaaccg
    17341 cggctttaaa cgcatccgca cgtttcaacg tttcagggca aagcagttcc gaactgaaat
    17401 tgggcgtaca gcatacattt taagcagatt ttgattttcc aaccttgtaa tccaaaggag
    17461 ttattatgaa aaaacaaatc accgcagccg taatgatgct gtctatgatc gcccccgcaa
    17521 tggcaaacgg attggacaat caggcatttg aagaccaagt gttccacacg cgggcagatg
    17581 cgccgatgca gttggcggag ctttctcaga aggagatgaa ggagactgaa ggggcttttc
    17641 ttccattggc tatcttgggt ggtgctgcca ttggtatgtg gacacagcat ggttttagtt
    17701 atgcaacgac aggcagacca gcttctgtta gagatgttgc tggcggatta ggcgcaattc
    17761 ctggtgatgt aggtgctgca ggaaaggttg tttcctttgc taaatatgga cgtgagatta
    17821 aaatcggcaa taatatgcgg atagcccctt tcggtaatag aacaggtcat cctattggaa
    17881 aatttcccca ttatcatcgt cgagttacgg ataatacggg caagactttg cctggacagg
    17941 gaattggtcg tcatcgccct tgggaatcaa aatctacgga cagatcatgg aaaaaccgct
    18001 tctaactcct cctttttttc tatttgaaga tgtgtctttg gatatatttc aaggattgtc
    18061 ggaattggaa aagaaaatag agccgcagga tttgatggat gatgtttacc gtgcttttga
    18121 ttcggttgga aatattctga atttccgtat agtagaaaaa gagcaaaaag ggttttgggt
    18181 aagtaccaaa atcaaaacag ttgtatttga ttcggcagat atgccttctg atgatctttt
    18241 tctgaaatgc ttacagtctt catataaggc ttattctgaa actgaacctg ccggtttaga
    18301 taaacggcag ctgatgaaaa cgttaattca aaaatgcgga ttcagttgtt gacgaaaaaa
    18361 tggattctga actaacagaa actgatttcg accatgtatg aggtaaaaaa tgtctttcgg
    18421 ctatttgatt gcaacatcgc aaccttgcga attgttgaca aaatctcgag gtgaaacttt
    18481 ttctttaatt atggataaga tggattta
//
LOCUS       DAXFZM010000043        18329 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.043, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000043 DAXFZM010000000
VERSION     DAXFZM010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 18329)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18329)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18329
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.043"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            6..81
                     /locus_tag="ACFJAG_001196"
     tRNA            6..81
                     /locus_tag="ACFJAG_001196"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:39..41,aa:Trp,seq:cca)
     gene            196..474
                     /gene="secE"
                     /locus_tag="ACFJAG_001197"
     CDS             196..474
                     /gene="secE"
                     /locus_tag="ACFJAG_001197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HFC3980480.1"
                     /translation="MTEHTPEKKNVKVNQLVVQDKESASNSGKEGFFAYFSNSWSEFK
                     KVVWPKREDAVRMTVFVIVFVAVLSIFIYAADTAISWLFFDVLLRREG"
     gene            476..1012
                     /gene="nusG"
                     /locus_tag="ACFJAG_001198"
     CDS             476..1012
                     /gene="nusG"
                     /locus_tag="ACFJAG_001198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HFC3980481.1"
                     /translation="MSKKWYVVQAYSGFEKNVQRILEERIAREEMGDYFGQILVPVEK
                     VVDIRNGRKTISERKSYPGYVLVEMEMTDDSWHLVKSTPRVSGFIGGRANRPTPISQR
                     EAEIILQQVQTGIEKPKPKVEFEVGQQVRVNEGPFADFNGVVEEVNYERNKLRVSVQI
                     FGRETPVELEFSQVEKIN"
     gene            1113..1547
                     /gene="rplK"
                     /locus_tag="ACFJAG_001199"
     CDS             1113..1547
                     /gene="rplK"
                     /locus_tag="ACFJAG_001199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HFC3980482.1"
                     /translation="MAKKIIGYIKLQIPAGKANPSPPVGPALGQRGLNIMEFCKAFNA
                     ATQGMESGLPIPVVITAFADKSFTFVMKTPPASILLKKAAGLQKGSSNPLTNKVGKLT
                     RAQLEEIAKTKEPDLTAADLDAAVRTIAGSARSMGLDVEGVV"
     gene            1547..2242
                     /gene="rplA"
                     /locus_tag="ACFJAG_001200"
     CDS             1547..2242
                     /gene="rplA"
                     /locus_tag="ACFJAG_001200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HFC3980483.1"
                     /translation="MAKVSKRLKVLRSSVEANKLYAIDEAIALVKKAATAKFDESVDV
                     SFNLGVDSRKSDQVIRGSVVLPKGTGKTTRVAVFTQGVNAEAAKEAGADVVGFEDLAA
                     EIKAGNLNFDVVIASPDAMRIVGQLGTILGPRGLMPNPKIGTVTPNVAEAVKNAKAGQ
                     VQYRTDKAGIVHATIGRASFAEADLKENFDALLDAIVKAKPAAAKGQYLKKVAVSSTM
                     GLGVRVDTSSVNN"
     gene            2470..2970
                     /gene="rplJ"
                     /locus_tag="ACFJAG_001201"
     CDS             2470..2970
                     /gene="rplJ"
                     /locus_tag="ACFJAG_001201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HFC3980484.1"
                     /translation="MSLNIETKKVAVEEISAAIANAQTLVVAEYRGISVSSMTELRAN
                     ARKEGVYLRVLKNTLARRAVQGTSFVELADQMVGPLVYAASEDAVAAAKVLHQFAKKD
                     DKIVVKAGSYNGEVMNAAQVAELASIPSREELLSKLLFVMQAPVSGFARSLAALAEKK
                     AGEEAA"
     gene            3028..3399
                     /gene="rplL"
                     /locus_tag="ACFJAG_001202"
     CDS             3028..3399
                     /gene="rplL"
                     /locus_tag="ACFJAG_001202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HFC3980485.1"
                     /translation="MAITKEDILEAVGSLTVMELNDLVKAFEEKFGVSAAAVAVAGPA
                     GAGAADAEEKTEFDVVLASAGDQKVGVIKVVRAITGLGLKEAKDIVDGAPKTIKEGVS
                     KAEAEDIQKQLEAAGAKVEIK"
     gene            3590..7768
                     /gene="rpoB"
                     /locus_tag="ACFJAG_001203"
     CDS             3590..7768
                     /gene="rpoB"
                     /locus_tag="ACFJAG_001203"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HFC3980486.1"
                     /translation="MNYSFTEKKRIRKSFAKRENVLEVPFLLATQIDSYAKFLQLENA
                     FDKRTDDGLQAAFNSIFPIVSHNGYARLEFVYYTLGEPLFDIPECQLRGITYAAPLRA
                     RIRLVILDKEASKPTVKEVRENEVYMGEIPLMTPSGSFVINGTERVIVSQLHRSPGVF
                     FEHDKGKTHSSGKLLFSARIIPYRGSWLDFEFDPKDLLYFRIDRRRKMPVTILLKALG
                     YNNEQILDIFYDKETFYLSSNGVQTDLVAGRLKGETAKVDILDKEGNVLVAKGKRITA
                     KNIRDITNAGLTRLDVEQESLLGKALAADLIDSETGEVLASANDEITEELLAKFDING
                     VKEITTLYINELDQGAYISNTLRTDETAGRQAARVAIYRMMRPGEPPTEEAVEQLFNR
                     LFFSEDSYDLSRVGRMKFNTRTYEQKLSEAQQNSWYGRLLNETFAGAADKGGYVLSVE
                     DIVASIATLVELRNGHGEVDDIDHLGNRRVRSVGELTENQFRSGLARVERAVKERLNQ
                     AESENLMPHDLINAKPVSAAIKEFFGSSQLSQFMDQTNPLSEVTNKRRVSALGPGGLT
                     RERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYARTNDYGFLETPYRRVIDG
                     KVTEEIDYLSAIEEGRYVIAQANADLDSDGNLIGDLVTCREKGETIMATPDRVQYMDV
                     ATGQVVSVAASLIPFLEHDDANRALMGANMQRQAVPCLRPEKPMVGTGIERSVAVDSA
                     TAIVARRGGVVEYVDANRVVIRVHDDEATAGEVGVDIYNLVKFTRSNQSTNINQRPAV
                     KAGDVLQRGDLVADGASTDLGELALGQNMTIAFMPWNGYNYEDSILISEKVAADDRYT
                     SIHIEELNVVARDTKLGAEDITRDIPNLSERMQNRLDESGIVYIGAEVEAGDVLVGKV
                     TPKGETQLTPEEKLLRAIFGEKASDVKDTSLRMPTGMSGTVIDVQVFTREGIQRDKRA
                     QSIIDSELKRYRLDLNDQLRIFDNDAFDRIERMIVGQKANGGPMKLAKGSEITTEYLA
                     GLPSRHDWFDIRLTDEDLAKQLELIKLSLQQKREEADELYEIKKKKLTQGDELQPGVQ
                     KMVKVFIAIKRRLQAGDKMAGRHGNKGVVSRILPVEDMPYMADGRPVDIVLNPLGVPS
                     RMNIGQILEVHLGWAAKGIGERIDRMLKERRKAGELREFLNKLYNGSGKKEDLDSLTD
                     EEIIELASNLRKGASFASPVFDGAKESEIREMLNLAYPSEDPEVEKLGFNDSKTQITL
                     YDGRSGEAFDRKVTVGVMHYLKLHHLVDEKMHARSTGPYSLVTQQPLGGKAQFGGQRF
                     GEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYENIVKGEHKIDAGMPESFNVLVK
                     EIRSLGLDIDLERY"
     gene            complement(7733..7873)
                     /locus_tag="ACFJAG_001204"
     CDS             complement(7733..7873)
                     /locus_tag="ACFJAG_001204"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980487.1"
                     /translation="MDKGTVLSDGISFLNIVGLPRIPAEQLPLCRLKPVSVAFQIDIQ
                     TQ"
     gene            7921..12096
                     /gene="rpoC"
                     /locus_tag="ACFJAG_001205"
     CDS             7921..12096
                     /gene="rpoC"
                     /locus_tag="ACFJAG_001205"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HFC3980488.1"
                     /translation="MNLLNLFNPLQTAGMEEEFDAIKIGIASPETIRSWSYGEVKKPE
                     TINYRTFKPERDGLFCAKIFGPVKDYECLCGKYKRLKFKGVTCEKCGVEVTLSKVRRE
                     RMGHIELAAPVAHIWFLKSLPSRLGMVLNMTLRDIERVLYFEAFVVTDPGMTPLQRRQ
                     LLTEDDYYNKLDEYGDDFDAKMGAEGIRELLRTLDVAGEIEILRQELESTGSDTKIKK
                     IAKRLKVLEAFHRSGMKLEWMIMDVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVIN
                     RNNRLKRLLELHAPDIIVRNEKRMLQEAVDSLLDNGRRGKAMTGANKRPLKSLADMIK
                     GKGGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFKPFIFHKLEKQGL
                     ASTVKAAKKLVEQEVPEVWDILEEVIREHPIMLNRAPTLHRLGIQAFEPILIEGKAIQ
                     LHPLVCAAFNADFDGDQMAVHVPLSLEAQMEARTLMLASNNVLSPANGEPIIVPSQDI
                     VLGLYYMTRDRINAKGEGSLFADVKEVHRAYHTKQVELGTKITVRLREWVKNEAGEFE
                     PVVNRYETTVGRALLSEILPKGLPFEYVNKALKKKEISKLINASFRLCGLRDTVIFAD
                     HLMYTGFGFAAKGGISIAVDDMEIPKEKAALLAEANAEVKEIEDQYRQGLVTNGERYN
                     KVVDIWGRAGDKIAKAMMDNLSKQKVIDRDGNEVDQESFNSIYMMADSGARGSAAQIK
                     QLSGMRGLMAKPDGSIIETPITSNFREGLTVLQYFIATHGARKGLADTALKTANSGYL
                     TRRLVDVTQDLVVVEDDCGTSDGFVMKAVVQGGDVIEALRDRILGRVTASDVVDPSSG
                     ETLVEAGTLLTEKLVDMIDQSGVDEVKVRTPITCKTRHGLCAHCYGRDLARGKLVNAG
                     EAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAASQVEAKSNGTARFSSQMRYVANN
                     KGELVVIGRSCEVVIHDDIGRERERHKVPYGAILLVQDGMAIKAGQTLATWDPHTRPM
                     ITEHAGMVKFENMEEGVTVAKQTDDVTGLSALVVIDGKRRSSSASKLLRPTVKLLDEN
                     GVEICIPGTSTPVSMAFPVGAVITVREGQEIGKGDVLARIPQASSKTRDITGGLPRVA
                     ELFEARVPKDAGMLAEITGTVSFGKETKGKQRLIITDVDGVAYETLISKEKQILVHDG
                     QVVNRGETIVDGAVDPHDILRLQGIEALARYIVQEVQEVYRLQGVKISDKHIEVIIRQ
                     MLRRVNIADAGETGFITGEQVERGDMMAANEKALEEGKEPARYENILLGITKASLSTD
                     SFISAASFQETTRVLTEAAIMGKQDELRGLKENVIVGRLIPAGTGLTYHRSRHQQWQG
                     VEQETAETQVTDE"
     gene            12385..12798
                     /locus_tag="ACFJAG_001206"
     CDS             12385..12798
                     /locus_tag="ACFJAG_001206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980489.1"
                     /translation="MKVSQSAMNKLVIAVIASMGLTACAGGGSDSSMSVQPSVSEQLK
                     DNANVDAKDEKVIEYLKKSSLKDVPKELQAKVLKVKGDEYTGVRKQYAGKLGKGESVK
                     AMLFLDGEEPFSKEQLQKMDVYVNGKKYEGSKGGN"
     gene            12816..13445
                     /locus_tag="ACFJAG_001207"
     CDS             12816..13445
                     /locus_tag="ACFJAG_001207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="factor H binding protein domain-containing
                     protein"
                     /protein_id="HFC3980490.1"
                     /translation="MSEQKIEFYGADKEQNYALLKTWVYEQPYSVVRGYFGYSRKDGN
                     PIEEDGQNPEEIPFDLYLGDIRGVATDEDKLPKAGSFQYEGRAFGGNGVLSKESLDNH
                     NGVFRYTIDFDRRKGSGSIEGMEQYGKIKLEEAAIERIPYRESGSSLGLKDRVSYFGV
                     NEGVAMLEKDNEIKKYHLGIFGEAANEVAGAVSQEHKHQAVIGFGGEKK"
     gene            13683..13925
                     /locus_tag="ACFJAG_001208"
     CDS             13683..13925
                     /locus_tag="ACFJAG_001208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980491.1"
                     /translation="MKSKNIFFMGYLIASATFAEDIGVPVEPINVGSRAAMPSEGESL
                     ALLPFAEDVPPVRDAMPSEVPKSAAGGDVRGGRSIP"
     gene            14122..14982
                     /locus_tag="ACFJAG_001209"
                     /pseudo
     CDS             14122..14982
                     /locus_tag="ACFJAG_001209"
                     /inference="COORDINATES: protein motif:HMM:NF016462.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="surface lipoprotein assembly modifier"
     gene            15161..15532
                     /gene="rpsL"
                     /locus_tag="ACFJAG_001210"
     CDS             15161..15532
                     /gene="rpsL"
                     /locus_tag="ACFJAG_001210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003093744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HFC3980492.1"
                     /translation="MPTINQLVRKGRQKPVYVNKVPALEACPQKRGVCTRVYTTTPKK
                     PNSALRKVCKVRLTNGFEVISYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGSL
                     DTAGVKDRKQARSKYGAKRPK"
     gene            15650..16120
                     /gene="rpsG"
                     /locus_tag="ACFJAG_001211"
     CDS             15650..16120
                     /gene="rpsG"
                     /locus_tag="ACFJAG_001211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008955889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HFC3980493.1"
                     /translation="MPRRREVPKRDVLPDPKFGSVELTKFMNVLMIDGKKSVAERIVY
                     GALEQIEKKTGKAAIEVFNEAIANSKPIVEVKSRRVGGANYQVPVEVRPSRRLALAMR
                     WVRDAARKRGEKSMDLRLAGELIDASEGRGGALKKREEVHRMAEANKAFSHFRF"
     gene            16139..18244
                     /gene="fusA"
                     /locus_tag="ACFJAG_001212"
     CDS             16139..18244
                     /gene="fusA"
                     /locus_tag="ACFJAG_001212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HFC3980494.1"
                     /translation="MARKTPISLYRNIGISAHIDAGKTTTTERILFYTGLTHKLGEVH
                     DGAATTDYMEQEQERGITITSAAVTSYWSGMAKQFPEHRFNIIDTPGHVDFTVEVERS
                     MRVLDGAVMVYCAVGGVQPQSETVWRQANKYQVPRLAFVNKMDRQGANFFRVVEQMKT
                     RLRANPVPIVIPVGAEDSFTGVVDLLKMKSIIWNEADKGTTFTYGDIPAELVETAEEW
                     RQNMIEAAAEASEELMDKYLGGEDLAEEEIVGALRQRTLAGEIQPMLCGSAFKNKGVQ
                     RMLDAVVELLPAPTDIPPVQGVNPNTEEADSRQASDEEKFSALAFKMLNDKYVGQLTF
                     IRVYSGVVKSGDTVLNSVKGTRERIGRLVQMTAADRTEIEEVRAGDIAAAIGLKDVTT
                     GETLCAESAPIILERMEFPEPVIHIAVEPKTKADQEKMGIALNRLAKEDPSFRVRTDE
                     ESGQTIISGMGELHLEIIVDRMKREFGVEANIGAPQVAYRETIRKAVKAEYKHAKQSG
                     GKGQYGHVVIEMEPMEPGGEGYEFIDEIKGGVIPREFIPSVDKGIRDTLPNGIVAGYP
                     VVDVRIRLVFGSYHDVDSSQLAFELAASQAFKEGMRQASPALLEPIMAVEVETPEEYM
                     GDVMGDLNRRRGVVLGMDDDGIGGKKVRAEVPLAEMFGYSTDLRSATQGRATYSMEFK
                     KYSEAPAHIAAAVTEARKG"
BASE COUNT         4952 a         3974 c         4755 g         4648 t
ORIGIN      
        1 tttagaggcc aatagctcaa ttggtagagt atcggtctcc aaaaccgagg gttgggggtt
       61 cgagaccctc ttggcctgcc aaataaaaaa ttaaccggcc ttgtgccggt taattttttt
      121 gtatttgtta tttagtaaac tctcttgcca tttacatgga ttgagaatag acagatgcta
      181 tgatggataa ataatatgac agaacatacg cctgaaaaaa agaatgttaa agtgaatcaa
      241 ctggttgttc aagataaaga atctgcatct aattccggta aggagggttt ttttgcatat
      301 ttctcaaatt cttggtccga attcaaaaag gtggtttggc ctaagcgtga agatgccgtc
      361 agaatgactg tatttgttat agtgtttgtt gctgtgcttt ctatatttat ctatgcggca
      421 gatacagcaa tttcgtggtt attttttgat gtattgctga gaagggaagg ttgagatgtc
      481 gaaaaaatgg tatgttgtac aggcgtattc ggggtttgag aagaatgtcc aacgaatatt
      541 ggaagagcga attgcccgtg aggagatggg agattatttc ggacaaattc tggtgcctgt
      601 agagaaagtt gttgatatcc gcaatggtcg taagactatt agtgaaagaa agtcatatcc
      661 tggttatgtg ttagttgaga tggaaatgac agatgactct tggcatcttg taaaaagcac
      721 tccccgtgtt tctggtttta ttggagggag ggctaataga cccacgccga ttagtcagag
      781 agaggctgaa attattttac agcaggttca gaccggcata gagaagccga aaccaaaagt
      841 tgaatttgag gtcggtcaac aggttcgtgt aaatgaagga ccgtttgcgg attttaacgg
      901 ggtggttgag gaggtcaatt atgaacggaa taagttacgc gtgtctgttc agatatttgg
      961 tagagaaaca cccgttgagc tggagttcag ccaggttgag aagattaact gatttttata
     1021 cttgaaaaaa aagcaataag aggatagaat caaaaattaa cttggggagc ggaaatggtt
     1081 ccgcgtctta cccgttttta ggagtccgtt aagtggcaaa gaaaattatc ggctatatta
     1141 aactgcaaat tcctgcaggc aaagccaatc catccccccc agttggtcct gctttgggtc
     1201 aacgtggttt gaatatcatg gaattctgta aagcatttaa tgctgcaacc caaggtatgg
     1261 aatctggttt gccaattccg gttgtgatta ctgcatttgc agataaatca ttcacatttg
     1321 tgatgaaaac tcctccggcc tctattctgt tgaaaaaagc cgccggtttg caaaaaggta
     1381 gttctaatcc tctgacaaac aaggtaggta aattgacccg tgcccagttg gaagaaattg
     1441 ctaaaactaa agagcctgat ttgactgctg ctgacttgga tgcggctgtt cgtactatag
     1501 caggttctgc tcgctcaatg ggcttggacg tggagggtgt tgtataatgg ctaaagtatc
     1561 taaacgcttg aaagttcttc gctcttctgt tgaagctaac aaactgtacg caatcgacga
     1621 agcaattgcc ttggttaaaa aagctgctac cgctaaattt gacgaatctg ttgacgtatc
     1681 tttcaacttg ggcgttgatt ctcgtaaatc tgaccaagtt atccgtggtt cagtcgttct
     1741 gcctaaaggt actggtaaga caacccgtgt ggctgtattt actcaaggtg taaatgcaga
     1801 agctgctaaa gaggctggtg cggatgtcgt cggtttcgaa gatttggctg ctgaaatcaa
     1861 agcaggcaat ctgaactttg atgttgttat tgcttctcct gatgcaatgc gtatcgttgg
     1921 tcaattgggt accatcttgg gtcctcgtgg tctgatgcca aaccctaaaa taggtacggt
     1981 tacccctaat gttgccgaag cggtaaaaaa tgcaaaagca ggtcaagtgc agtaccgtac
     2041 cgacaaggca ggtattgttc atgcaacgat tggtcgtgct tcattcgctg aagctgattt
     2101 gaaagagaac tttgatgcgt tgctggacgc tatcgttaaa gccaaacctg ctgctgctaa
     2161 aggtcagtac ctgaaaaaag ttgctgtatc cagcactatg ggtttaggtg ttcgcgttga
     2221 tacatcaagc gtgaataact aatctaagaa attttcaagc aactctgttt ttgagttgct
     2281 tgaatttggg ctacttaaaa ttaagtagat gtccaagacc gtagggatcg taagatttaa
     2341 tcgtaactgc cctacgcaga cggtagtcct gaaacacatt gcaagattgc ttgtaagatg
     2401 tctttttagg ttaccgcgct ggtgggatat cgttttggta tcctgtttat aaacagtggg
     2461 aggtagacct tgagtctcaa tattgaaacc aagaaagtgg cggtcgagga aattagcgcg
     2521 gcaattgcta atgctcaaac cctcgtagtc gctgaatatc gcggtatcag tgtttccagt
     2581 atgactgagc ttcgtgcgaa tgcacgtaaa gaaggcgttt atttgcgcgt tctgaaaaat
     2641 actctggctc gtcgcgcagt gcaaggtact tcatttgtag aattggccga tcaaatggtt
     2701 ggtccgttgg tttacgctgc ttctgaagat gctgttgctg ctgctaaagt gttgcaccaa
     2761 ttcgcgaaaa aagatgacaa aattgtcgtt aaagccggtt cttacaatgg cgaagtaatg
     2821 aatgctgctc aggttgctga gttggcttct attccgagcc gcgaagagct gttgtccaaa
     2881 ctgttgttcg ttatgcaagc tcctgtatcg ggctttgcgc gcagtttggc tgctttggca
     2941 gagaaaaaag ccggcgaaga agctgcttaa tcgattttgt ttctgttaat caattatttt
     3001 ttaatacaat atttggagta aaatagcatg gctattacta aagaagacat tttggaagca
     3061 gttggttctt tgaccgtaat ggaattgaat gacctggtta aagcttttga agaaaaattc
     3121 ggtgtttctg ctgctgctgt tgcagttgca ggtcctgctg gtgccggtgc tgccgatgct
     3181 gaagaaaaaa ccgaatttga tgtcgttttg gcttctgccg gcgatcaaaa agtcggcgtg
     3241 attaaagttg tccgtgcaat tactggtttg ggtctgaaag aagctaaaga catcgttgac
     3301 ggcgcaccta aaaccattaa agagggtgtt tctaaagctg aagccgaaga catccaaaaa
     3361 caactggaag cagcaggcgc taaagtcgaa atcaaataat ttgatgcttc ttatgaaggc
     3421 tggcagtttt ctgccagcct tattttgctt cttaaaataa gcattaagta ttgtttacat
     3481 ttatttgcat agtttttatc aaatcattgc aaataaatgt aaatatcaga ttgatgcgta
     3541 ccgttgtttt cagacggcct attattgaaa attacttttc ggagtgtgta tgaactattc
     3601 gtttaccgag aaaaaacgta tccgtaagag ttttgcaaag cgggaaaatg ttttggaagt
     3661 tccttttcta ctggcaaccc aaattgattc ttatgcgaaa tttttgcagc tggaaaatgc
     3721 ttttgacaaa cgtaccgatg acggtctgca agcggcattt aattctattt tcccgattgt
     3781 gagccacaac ggttatgctc gtctggagtt tgtatattac acgctgggcg agcctttgtt
     3841 cgatatccct gaatgtcaat tgcgcggaat cacttatgct gcccctctgc gcgcgcgtat
     3901 ccgtttggtg attttggata aggaagcgtc taaaccgacg gtaaaagaag ttcgtgaaaa
     3961 cgaagtgtat atgggcgaaa ttccgttgat gaccccgagc ggttcttttg tgattaacgg
     4021 cacagagcgt gtgattgttt cccagttgca ccgttcgccc ggtgtgttct tcgagcatga
     4081 caaaggtaag acacactctt ccggcaaatt gttattctcc gcccgcatca ttccctaccg
     4141 tggttcatgg ttggattttg aatttgatcc gaaagatttg ctgtatttcc gtatcgaccg
     4201 ccgccgtaaa atgccggtaa cgattttgtt gaaggctttg ggctacaaca atgagcaaat
     4261 cttggatatt ttctacgaca aagaaacgtt ttatttgtct tcaaacggtg ttcaaaccga
     4321 tttggtcgca ggccgtctga aaggcgaaac tgccaaggtc gatatcttgg ataaagaagg
     4381 caatgtattg gttgccaaag gtaagcgcat tactgcgaaa aatatccgtg atattaccaa
     4441 tgcaggcctg acccgtttgg atgtagaaca ggaaagcctg ctgggcaaag cattggctgc
     4501 cgatttgatt gattcggaaa ccggcgaggt attggcttct gccaatgatg aaattacaga
     4561 agagttgttg gccaaatttg atattaacgg cgtaaaagaa attacgaccc tttacatcaa
     4621 tgagttggat cagggtgctt atatttccaa taccttgcgc acggatgaga ctgccggccg
     4681 gcaggcggcg cgtgttgcga tttaccgtat gatgcgtccg ggcgaaccgc ccaccgaaga
     4741 ggcggtcgag caattgttta accgcttgtt cttcagtgaa gacagctacg atttgtcccg
     4801 cgtaggccgt atgaaattta atacgcgcac atacgaacaa aaactgtccg aagcccaaca
     4861 aaactcttgg tacggccgcc tgttgaacga gacgtttgcc ggtgctgccg acaaaggcgg
     4921 ttatgtcctg agcgtcgaag atattgtcgc ctcgattgcg actttggtcg agttgcgtaa
     4981 cggccatggc gaagtggacg atatcgatca cttgggcaac cgtcgagtac ggtcggtagg
     5041 cgagctgact gaaaaccaat tccgcagcgg tttggctcgt gtggaacgtg ccgtaaaaga
     5101 acgtttgaat caggcggaat cagaaaactt gatgccgcac gacttgatta atgcgaaacc
     5161 cgtttctgcc gccatcaaag aattcttcgg ctccagccaa ttgagtcagt ttatggatca
     5221 gaccaatccc ttgtctgaag taaccaataa acgccgtgta tctgcattgg gcccgggcgg
     5281 tttgacccgc gaacgtgccg gcttcgaagt gcgggacgtg catccgaccc actatggacg
     5341 tgtatgtcct attgaaacgc ctgaaggtcc gaacatcggt ttgatcaact cattgtctgt
     5401 ttacgcgcgc accaatgatt acggtttctt ggaaacgcct taccgccgcg ttattgacgg
     5461 caaagtaacc gaggaaattg attacttgtc tgccatcgaa gaaggccgct atgtgattgc
     5521 acaggcgaat gccgatttgg attcagacgg caatctgatt ggcgatttgg ttacctgtcg
     5581 tgaaaaaggc gaaaccatta tggcaacgcc cgaccgcgtc caatatatgg acgtggcaac
     5641 cggtcaggtg gtatccgttg cggcatccct gattccgttc ttggaacacg atgacgcgaa
     5701 ccgcgcattg atgggtgcca acatgcaacg tcaggcagtg ccttgtctgc gtcctgaaaa
     5761 accgatggtc ggtaccggta tcgagcgttc cgttgccgtt gactctgcta ctgcaatcgt
     5821 tgcccgccga ggcggcgtgg tcgagtatgt cgatgccaac cgcgttgtga tccgtgtcca
     5881 tgacgacgaa gcgactgccg gcgaagtggg tgtcgatatt tacaatttgg ttaaattcac
     5941 ccgttccaat caatctacca acatcaacca acgtccggct gtcaaagcag gcgatgtttt
     6001 gcaacgcggc gatttggtgg ccgacggcgc gtccaccgat ttgggcgaat tggctttggg
     6061 tcaaaatatg accatcgcct tcatgccgtg gaacggttac aactacgaag actcgattct
     6121 gatttccgaa aaagtggctg cggacgaccg ctatacttcg attcacattg aggaattgaa
     6181 tgtcgttgcc cgcgatacca agctgggtgc ggaagacatt acccgcgata ttccgaactt
     6241 gtccgagcgt atgcaaaacc gtttggacga atccggtatc gtttacatcg gtgcggaagt
     6301 agaagccggc gatgtgttgg taggcaaggt aacgcctaaa ggcgaaaccc agctgacgcc
     6361 ggaagaaaaa ctgctgcgcg ccatcttcgg cgaaaaagcg tctgacgtaa aagatacttc
     6421 attgcgtatg cctaccggta tgagcggtac ggttatcgac gttcaagtct ttacccgcga
     6481 aggcatccaa cgcgacaaac gcgcccaatc cattatcgat tccgaattga aacgctaccg
     6541 tttggatttg aacgaccaat tgcgtatttt cgacaacgac gcattcgacc gtatcgagcg
     6601 tatgattgtc ggtcagaaag ccaacggcgg cccgatgaag ctggccaaag gcagcgaaat
     6661 cacgaccgaa tatctggcgg gtctgccgag caggcacgat tggttcgata tccgtttgac
     6721 cgatgaagat ttggccaagc agttggaact gattaaattg agcctgcaac aaaaacgcga
     6781 agaagcggat gagttgtatg agatcaagaa gaaaaaactg acccaaggcg acgagctgca
     6841 acccggcgta caaaaaatgg tgaaagtctt tatcgccatc aaacgccgtc tgcaagccgg
     6901 tgacaaaatg gcgggccgcc acggtaataa aggtgtggta tctcgcattc tgcctgtgga
     6961 agacatgccg tacatggcgg acggccgtcc tgtggacatc gtactgaacc cgttgggcgt
     7021 accttcccgt atgaacatcg gtcagatttt ggaagttcac ttgggttggg cggcaaaagg
     7081 tatcggcgag cgcatcgacc gtatgctgaa agagcgacgc aaagccggcg agctgcgcga
     7141 gttcttgaac aaactctaca acggcagcgg taagaaagaa gatttggaca gcctgactga
     7201 tgaagaaatc atcgaattgg cttccaatct gcgtaaaggt gcatctttcg cctctcctgt
     7261 attcgacggt gcgaaagagt ctgaaatccg cgaaatgttg aacttggctt acccaagcga
     7321 agatcctgag gttgagaaac tgggcttcaa cgacagtaaa actcaaatca cgctgtatga
     7381 cggccgttca ggcgaagcat ttgaccgcaa ggttacagtc ggtgtgatgc actatctgaa
     7441 actgcaccac ttggttgacg aaaaaatgca cgcgcgttct accggcccgt acagtctggt
     7501 tactcaacaa cctctgggcg gtaaagctca gtttggcggc caacgtttcg gtgagatgga
     7561 ggtttgggca ttggaagcat acggcgcggc atacacgctg caagagatgc tgactgtgaa
     7621 gtctgacgac gtgaacggcc gtaccaaaat gtacgaaaac atcgtcaaag gcgaacacaa
     7681 aatcgatgcc ggtatgcccg agtccttcaa cgtattggtc aaagagattc gctcactggg
     7741 tttggatatc gatttggaac gctactgata cgggtttcag acggcataag gggagctgtt
     7801 ctgcaggtat gcggggcagc ccgacaatgt ttaaaaacga aatgccgtct gaaagcactg
     7861 tacctttatc catatcgaaa atccgccacg cggtaaaaat atttccttca aggagcagaa
     7921 atgaatttgt tgaacttatt taatccgttg caaaccgcag gtatggaaga agagtttgat
     7981 gccatcaaaa tcggtattgc ctctcccgaa accatccgct catggtctta tggcgaagtt
     8041 aaaaaacctg aaaccatcaa ctaccgtacg ttcaaacccg agcgcgacgg cttgttctgc
     8101 gccaaaatct ttggcccggt caaagactac gaatgcttgt gcggaaaata caaacgattg
     8161 aaatttaaag gcgtaacctg tgaaaaatgt ggcgtagaag ttaccctgtc caaagtgcgc
     8221 cgcgaacgca tgggccatat cgaattggct gcacccgttg cccatatttg gttcttgaaa
     8281 tccctgcctt cccgcttggg tatggtattg aacatgacgt tgcgtgatat cgaacgcgta
     8341 ttgtactttg aagcattcgt ggtgaccgat cccggcatga ctccgttgca acgtcgtcaa
     8401 ttgctgactg aagacgatta ctacaacaaa ctggacgaat acggcgacga cttcgatgcc
     8461 aaaatgggtg cggaaggtat ccgcgaattg ttgcgaacct tggatgtagc aggcgaaatc
     8521 gaaatcctgc gccaagagct tgaatcgacc ggttctgaca ccaaaatcaa aaaaatcgct
     8581 aaacgcttga aagtattgga agccttccat cgttccggta tgaagctgga gtggatgatt
     8641 atggatgtgc tgccggtatt gccgcctgat ttgcgtccgt tggttccgtt ggacggcggc
     8701 cgttttgcca cttccgattt gaacgatttg taccgccgcg tcatcaaccg caacaaccgt
     8761 ctgaaacgcc tgctggaact gcatgcgcct gacatcatcg tccgcaacga aaaacgtatg
     8821 ttgcaagaag cggttgactc gctgttggat aacggccgtc gcggtaaagc catgaccgga
     8881 gccaacaaac gtccgctgaa atcgttggca gatatgatta aaggtaaagg cggccgcttc
     8941 cgtcaaaacc tgttgggcaa acgtgtggac tactccggcc gttccgtgat taccgtaggc
     9001 ccatacctgc gtctgcacca atgcggtttg ccgaaaaaaa tggcgttgga actgttcaaa
     9061 ccatttattt tccacaaatt ggaaaaacaa ggtttggcgt ctaccgttaa agctgcgaaa
     9121 aaattggtag aacaagaagt acctgaagta tgggatatct tggaagaagt catccgcgaa
     9181 catccgatta tgttgaaccg tgcgccgacc ctgcaccgtt tgggtattca agcgttcgag
     9241 cctattctga tcgaaggtaa agcgattcag ttgcacccat tggtgtgtgc cgcatttaat
     9301 gccgactttg acggtgacca aatggcagta cacgttccat tgagcttgga agcgcaaatg
     9361 gaagcacgca cgctgatgct ggcttcaaac aacgtattgt ctcctgccaa cggcgaaccg
     9421 attatcgtac cttcccaaga catcgtattg ggtctgtact acatgacccg cgaccgtatc
     9481 aatgccaaag gcgagggcag cctgtttgcc gatgtgaaag aagtgcatcg tgcataccat
     9541 accaaacagg tcgagctggg tacaaaaatc accgtacgtc tgcgcgaatg ggtgaaaaac
     9601 gaagcaggtg agtttgagcc tgtcgttaac cgttacgaaa caaccgtcgg ccgtgcattg
     9661 ttgagcgaaa tcctgccgaa aggcctgccg tttgaatatg tcaacaaagc gttgaagaaa
     9721 aaagaaattt ccaagctgat taacgcatcg ttccgcctgt gcggcttgcg cgatacggtt
     9781 atcttcgccg accacctgat gtacaccggt ttcggatttg cggcaaaagg cggtatttcc
     9841 attgccgttg acgatatgga aattccaaaa gaaaaagcgg ccttgctggc tgaagccaat
     9901 gccgaagtta aagaaatcga agaccaatac cgtcaaggtt tggttaccaa cggcgaacgc
     9961 tacaacaaag tggtcgatat ttggggtcgt gccggcgata agattgctaa agcgatgatg
    10021 gacaacctgt ccaaacaaaa agttatcgac cgtgacggca acgaagtcga tcaagagtca
    10081 ttcaactcca tttatatgat ggcggactcc ggtgcccgtg gttctgcggc tcagattaaa
    10141 cagttgtccg gtatgcgcgg tttgatggcg aaacctgacg gatcgattat tgaaacgccg
    10201 attacctcaa acttccgcga aggtctgacc gtattgcaat actttattgc gacccacggt
    10261 gcgcgtaagg gtttggcgga taccgcgttg aaaaccgcga actccggtta cctgacccgt
    10321 cgtctggtag acgtaactca agacttggtc gttgttgaag acgattgcgg tacttcagac
    10381 ggctttgtca tgaaggcagt ggtacaaggc ggtgatgtga ttgaagcatt gcgcgatcgt
    10441 attttgggtc gtgttaccgc gtctgacgtt gtcgatccgt caagcggcga gactttggtt
    10501 gaagccggta cgttgttgac tgaaaaactg gtggatatga ttgaccaatc cggtgtcgat
    10561 gaagtcaaag tccgtactcc gattacttgt aaaacccgcc acggtctgtg cgcgcactgt
    10621 tacggccgcg acttggcgcg cggcaaactg gtcaatgccg gcgaggcagt cggcgtgatt
    10681 gcggctcagt ctattggtga accgggtacc cagttgacca tgcgtacgtt ccacatcggt
    10741 ggtgcggcat cccgtgcggc agcagccagc caagtcgaag ccaaatccaa cggtacggca
    10801 cgtttcagca gccaaatgcg ttatgttgcc aacaacaaag gcgagttggt tgtcatcggc
    10861 cgttcttgcg aagtcgtgat tcacgatgac atcggccgtg aacgcgaacg ccacaaagta
    10921 ccttacggtg ccatcctgct ggtacaagac ggtatggcca ttaaagccgg tcaaaccttg
    10981 gcaacttggg atccgcatac ccgtccgatg attaccgaac atgcaggtat ggtgaaattc
    11041 gagaacatgg aagagggcgt taccgttgca aaacaaaccg atgatgtaac cggtttgtcc
    11101 gctttggtag tgattgacgg taaacgccgt tcctctagtg cttccaaact gctgcgtccg
    11161 actgtgaaac tcttggacga aaacggcgtg gaaatctgta ttcccggtac gtccactccg
    11221 gtttcgatgg cattccccgt tggtgcggtg attaccgtac gcgaaggtca ggaaatcggt
    11281 aaaggcgacg tattggcgcg tattccgcaa gcctcttcca aaacccgcga cattaccggc
    11341 ggtctgccgc gcgttgccga gctgtttgaa gcacgcgtgc cgaaagatgc cggtatgctg
    11401 gcggaaatta ccggtaccgt ttccttcggt aaggagacca aaggcaaaca acgtctgatt
    11461 atcactgacg tggacggtgt agcatacgag actttgattt ccaaagagaa acaaattctg
    11521 gtacatgacg gtcaagtggt aaaccgaggc gaaaccattg tggacggcgc ggtcgatccg
    11581 cacgatattc tgcgtctgca aggtatcgaa gcactggcac gctacattgt ccaagaggtg
    11641 caagaggttt accgcctgca aggtgtgaag atttccgata aacacatcga agtcatcatc
    11701 cgtcaaatgt tgcgccgtgt gaacattgcg gatgccggcg aaaccgggtt tattaccgga
    11761 gagcaggtcg aacgcggcga tatgatggcg gccaatgaaa aagctttgga agaaggcaaa
    11821 gagccggcac gttacgaaaa catattgctg ggtattacca aagcctccct gtccaccgac
    11881 agcttcattt ctgccgcatc gttccaagaa accacccgtg tgttgaccga agctgccatc
    11941 atgggcaaac aagacgaact gcgcggtctg aaagagaatg tcatcgtcgg tcgcctgatt
    12001 cctgccggta ccggtttgac ttatcaccgc agccgtcatc agcaatggca aggggtagag
    12061 caggagactg ctgaaaccca agtaacggat gaataatctt cggcgcgttc attcaataaa
    12121 aaaccgcaag ccttgagctt gcggtttttc tttgtccgat taaggcaaaa acaagcgttt
    12181 tcgtcatttt gaggcgtgtg gatataagcc cgataagtgt cccatatctt cgtgccgtca
    12241 aattatgcat cgaatagaac gagttaaatc cgaaggttat tgtgttaaat attgcaaaaa
    12301 tactttaaaa atttcgcacg gtgggggggt agaattccca gacttaaagc ttaagttttt
    12361 ttaacaaagt ttgggggagt ctaaatgaaa gtatctcaat cagcaatgaa taaacttgtt
    12421 attgctgtta ttgcttctat ggggctaaca gcgtgcgcgg gtggcggttc cgattcatct
    12481 atgtcggttc aaccaagcgt ttcggaacaa ctgaaagaca atgcaaatgt tgatgcgaaa
    12541 gatgaaaaag ttattgaata tctgaagaaa tcatcattaa aagatgtacc aaaagaattg
    12601 caagccaaag tattaaaggt taaaggtgat gaatatacag gagtgcgaaa acaatatgca
    12661 ggtaagctcg gtaagggtga atctgtcaag gcaatgctat ttctagacgg cgaagagccg
    12721 tttagtaagg aacaacttca gaagatggat gtatatgtta atggtaaaaa atacgaaggt
    12781 agtaaggggg ggaactagat gttctcccca aaggtttgag tgagcaaaag attgagtttt
    12841 acggtgcgga taaagaacag aattatgcgc tattaaaaac ttgggtttat gagcaaccgt
    12901 attctgtggt tagaggctat tttggctaca gtcgaaaaga cggtaatcct atagaagagg
    12961 atggacaaaa tcctgaagag attccttttg acttgtatct gggcgacatt agaggcgtgg
    13021 caacagatga agacaaatta cccaaggctg ggagctttca atatgaaggt cgggcatttg
    13081 gcggtaatgg ggttttatcc aaagaatcgt tagataacca taatggcgta tttagataca
    13141 caattgattt tgatcgtaga aaaggctctg gctcaattga aggaatggaa caatatggaa
    13201 agatcaaatt agaagaagct gctattgaga gaatccctta tcgagagtcc ggctccagct
    13261 tggggttgaa agaccgggtt tcttatttcg gcgtgaacga aggggtggct atgttagaga
    13321 aggataatga gattaaaaag tatcatttgg gtattttcgg cgaagcggct aatgaagtag
    13381 caggtgctgt aagccaagag cataaacatc aagctgttat cggtttcggc ggcgagaaga
    13441 aatagagaaa gcactatttc tatttagtgc cgtttgtccg ggcaagatgc cgtctgaagt
    13501 ttcagacggc attttcttca aaaaacagtc cgccaaatcg aatactgcca agcggcaatg
    13561 caatacctca aaacagcaat aatttctttt aaaacagttg attcttactg aacataaggc
    13621 cgggcaatac gaaaagaaaa atggcgttgc tgggcatttt atttgaattt gttatgaaat
    13681 tgatgaaatc taaaaatatc ttttttatgg gatacctaat cgcttcggcg acgtttgccg
    13741 aggatatcgg cgtgcctgtc gaaccgatta acgtcggtag tcgggctgcg atgccgtctg
    13801 aaggggaaag cctcgccctc ctgccgtttg cagaggatgt gccgccggtt cgcgatgcaa
    13861 tgccgtctga agttcctaaa agcgcggcag gcggcgatgt tcgaggcggc cgatctatac
    13921 cgtgagttgt tgtcggaaag acccgatctt gtttatcccc gttttgattt gggcgtgatg
    13981 ctgtttgaag acaaacaata tcgtgaggca ttggttcagt tgcaccgggc cgaggaggtg
    14041 ttgccgcccg atatgcggca gcttgcacgg gaatatatcc gtcaggcgga agcggtgcag
    14101 gcgtggcatc cttcgttcaa tatgaactat gaacaaacag ataatgtaaa caatgcgtcc
    14161 ctttcacggg acatcgtcat caacggccgg aaatggataa aatcggaaga cagcctgccc
    14221 aaacgcgcca acgggataag gtacgaactg ggcgttgatc ggatgtttaa catggcaggc
    14281 aatcactttg cccgcttagg catcagcggt tccggtgtgc attattggaa tgcccgggat
    14341 tttagcgaac aggcgtttca tgccgaagta ggctaccgtt atcggaatag ccgtctagag
    14401 tggggattcc ggccctttgt caaacaaaac cggctgggca ataaccgtta tacggcaaat
    14461 acgggtattg tgttggatta cagccgccgt ctgaatgaaa aatggcgcag cacccaatct
    14521 ttccagtatg gccgcaaaca ataccatgac gaatatttgg caaaacgtta caacagtaaa
    14581 acgatttcgg tgagcggtac gttcagctat tacgctatgt cggcttggca gttgtacggg
    14641 ggtattagcg gtatgtttga taatactgtg gagaaagagc aggcttcacg gcgttatggt
    14701 gtaagtttgg gtacggtgaa aatattagac ggcggtcttg gactgaagtt gggtgcgggt
    14761 tacacgaaac ggatatttaa agcccctgca acattaattt acaattttac tcggcgtgat
    14821 gattaacatc ggatgagcgc ggctttatgg cataaaaaac tgtcgtggaa aggatttaca
    14881 ccccaaataa atttccgtta caacaagaac aacagcaata tgcccgcctt ttattcgcac
    14941 agcggcaagg gatggtttgt cagtatggaa aaaacgtatt gacagtattt tctccagccg
    15001 tccgactgat tgtgagggat gtcggtaaat atttatcggc aaacaagaaa atcatctttt
    15061 ttcttgtcgt tatgcttgac tgtctgcttg caataaaaat ataattccgc tcttgccgac
    15121 atggtgtcgg caagtattta actcaacagg acgagaaaat atgccaacta tcaaccaatt
    15181 ggtacgcaaa ggccgtcaaa agcccgtgta cgtaaacaaa gtgcccgcac tggaagcctg
    15241 cccgcaaaaa cgcggcgtgt gcacccgtgt atacacgact acccctaaaa aacctaactc
    15301 tgcattgcgt aaagtatgta aagtccgcct gaccaacggt tttgaagtca tttcatatat
    15361 cggcggtgaa ggccacaacc tgcaagagca cagcgtcgta ctgattcgcg gcggccgtgt
    15421 aaaagacttg ccgggtgtac gttaccacac tgtacgcggt tctttggata ctgcaggtgt
    15481 taaagaccgc aaacaagccc gttctaaata cggtgctaag cgtcctaaat aattaccggg
    15541 actcaaatag gcacgtcggc cgcctaagct gaacaacggc cgagtaagtg aatactcaat
    15601 tgggtattca tgggaataga cccgactgaa tagattaaag gaaattaaaa tgccaagacg
    15661 tagagaagtc cccaagcgcg acgtactgcc agatcctaaa ttcggtagcg tcgagttgac
    15721 caaattcatg aacgtattga tgattgacgg taaaaaatcc gttgccgagc gtatcgttta
    15781 cggtgcgttg gaacagattg agaaaaaaac cggcaaagca gcaatcgaag tatttaacga
    15841 agccattgca aactccaaac ctatcgtgga agtgaaaagc cgccgtgtag gtggtgcaaa
    15901 ctaccaagtt cctgttgaag ttcgtccttc acgccgtctg gctttggcaa tgcgttgggt
    15961 tcgcgacgcg gcccgcaaac gtggtgagaa atccatggat ctgcgtttgg caggcgagtt
    16021 gattgatgcg tccgaaggcc gtggcggtgc gttgaaaaaa cgtgaagaag tacaccgtat
    16081 ggctgaagcc aacaaagcat tctctcactt ccgtttctaa ttttgaaagg ctaataaaat
    16141 ggctcgtaag accccgatca gcctgtaccg caacatcggt atttccgccc atatcgatgc
    16201 gggtaaaacc acgacgacag aacgtatttt gttctatacc ggtttgaccc acaagctggg
    16261 cgaagtgcat gacggtgcgg ctactaccga ctacatggaa caagagcaag agcgcggtat
    16321 taccattacc tccgctgccg ttacttccta ctggtccggt atggcgaaac aattccccga
    16381 gcaccgcttc aacatcatcg acaccccggg gcacgttgac tttaccgtag aggtagagcg
    16441 ttctatgcgt gtattggacg gcgcggtaat ggtttactgt gcggtgggcg gtgttcaacc
    16501 gcaatctgaa accgtatggc ggcaagccaa caaataccaa gttccgcgct tggcgtttgt
    16561 caataaaatg gaccgccaag gtgccaactt cttccgcgtt gtcgagcaaa tgaaaacccg
    16621 tttgcgcgca aaccccgtac ctatcgtcat tccggtaggc gcggaagaca gtttcaccgg
    16681 tgttgtcgat ttgctgaaaa tgaaatctat catctggaat gaagccgata aaggtacaac
    16741 ctttacctat ggcgatattc ctgccgaatt ggtcgaaact gccgaagaat ggcgtcaaaa
    16801 tatgattgaa gccgcagccg aagccagcga agaactgatg gacaaatact tgggcggtga
    16861 agatctggcc gaagaagaaa tcgtaggcgc gttgcgtcaa cgtactttgg caggcgaaat
    16921 tcagcctatg ctgtgcggtt ctgcatttaa aaacaaaggt gttcaacgta tgttggacgc
    16981 agttgtagaa ttgctgccag ctcctaccga tattcctccg gttcaaggtg ttaatcctaa
    17041 cactgaagaa gccgacagcc gtcaagccag cgatgaagag aaattctctg cattggcatt
    17101 caaaatgttg aacgacaaat acgtcggtca gctgaccttt atccgcgttt actcaggcgt
    17161 agtaaaatcc ggcgataccg tactgaattc tgtaaaaggc actcgcgaac gtatcggtcg
    17221 tttggtgcaa atgactgccg cagaccgtac tgaaatcgaa gaagtacgcg ctggcgacat
    17281 cgcagccgct atcggtctga aagacgttac taccggtgaa accttgtgtg cggaaagcgc
    17341 gccgattatc ttggaacgta tggaattccc cgagccggta atccatattg ccgttgagcc
    17401 gaaaaccaaa gccgaccaag agaaaatggg tatcgccctg aaccgcttgg ctaaagaaga
    17461 cccttctttc cgcgttcgta cagacgaaga atccggtcaa accattattt ccggtatggg
    17521 tgagctgcac ttggaaatta ttgttgaccg tatgaaacgc gaattcggtg tggaagcaaa
    17581 tatcggtgca cctcaagtgg cttaccgtga aactatccgc aaagccgtta aagctgaata
    17641 caaacatgca aaacaatccg gtggtaaagg tcaatacggt cacgttgtga ttgaaatgga
    17701 acctatggaa ccgggtggtg aaggttacga gtttatcgat gaaattaaag gtggtgtgat
    17761 tcctcgcgaa tttattccgt ctgtcgataa aggtatccgc gatacgttgc ctaacggtat
    17821 cgttgccggc tatcctgtag ttgacgtacg tatccgtctg gtattcggtt cttaccatga
    17881 tgtcgactct tcccaattgg catttgaatt ggctgcttct caagcgttta aagaaggtat
    17941 gcgtcaagca tctcctgccc tgcttgagcc gattatggca gttgaagtgg aaactccgga
    18001 agaatacatg ggcgacgtaa tgggcgactt gaaccgccgt cgcggtgttg tattgggtat
    18061 ggatgatgac ggtatcggcg gtaaaaaagt ccgtgccgaa gtacctctgg cagaaatgtt
    18121 cggttactcg accgacctgc gttctgcaac ccaaggccgc gctacttact ctatggagtt
    18181 caagaaatat tctgaagctc ctgcccacat agctgctgct gtaactgaag cccgtaaagg
    18241 ctaatcaggc aaataggccg tctgaaaggc tgaaatgatt tttcagatgg cattgttctt
    18301 taatcgatct ttaatgtaaa ggaattagc
//
LOCUS       DAXFZM010000044        18318 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.044, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000044 DAXFZM010000000
VERSION     DAXFZM010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 18318)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18318)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18318
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.044"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..513
                     /locus_tag="ACFJAG_001213"
     CDS             <1..513
                     /locus_tag="ACFJAG_001213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HFC3980495.1"
                     /translation="FQNRTPEIHETCMIDEACVVIGEVSLAEDVSVWPCAVLRGDVNS
                     ITVGARSNIQDGSVLHVSHKTAAKPEGSPLVIGEDVTVGHKVMLHGCRIGNRVLVGMG
                     STVLDDAVIEDDVMIGAGSLVPPRKRLEGGYLYIGSPVRQVRLLTDEEKAFLKYSAAH
                     YVKLSKQYGM"
     gene            624..779
                     /locus_tag="ACFJAG_001214"
     CDS             624..779
                     /locus_tag="ACFJAG_001214"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980496.1"
                     /translation="MPSESLFFGFGRHFIADFFLEFDRMFARFVEHDVRPTFLRQSQI
                     HALGRTR"
     gene            complement(887..2482)
                     /locus_tag="ACFJAG_001215"
     CDS             complement(887..2482)
                     /locus_tag="ACFJAG_001215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007342770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HFC3980497.1"
                     /translation="MSQEILDQVRRRRTFAIISHPDAGKTTLTEKLLLFSGAIQSAGT
                     VKGKKTGKFATSDWMDIEKQRGISVASSVMQFDYKDHTVNLLDTPGHQDFSEDTYRVL
                     TAVDSALMVIDAAKGVEAQTIKLLNVCRLRDTPIVTFMNKYDREVRDSLELLDEVEDI
                     LQIRCAPVTWPIGMGKNFKGVYHILNDEIYLFEAGGERLPHEFDIIKGINNPELEQRF
                     PLEIQQLRDEIELVQAASNEFNLDEFLAGELTPVFFGSAINNFGIQEILNSLIDWAPA
                     PKPRDATMRMVGPDEPKFSGFIFKIQANMDPKHRDRIAFLRVCSGKFERGMKMKHLRI
                     NREIAASSVVTFMSHNRELAEEAYAGDIIGIPNHGNIQIGDSFSEGEQLAFTGIPFFA
                     PELFRSVRIKNPLKIKQLQKGLQQLGEEGAVQVFKPMSGADLILGAVGVLQFEVVTSR
                     LANEYGVEAVFDSASIWSARWVSCDDKKKLAEFEKANAGNLAIDAGGNLAYLAPNRVN
                     LGLTQERWPDIVFHETREHSVKL"
     gene            complement(2589..2984)
                     /gene="hisI"
                     /locus_tag="ACFJAG_001216"
     CDS             complement(2589..2984)
                     /gene="hisI"
                     /locus_tag="ACFJAG_001216"
                     /EC_number="3.5.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004635 - phosphoribosyl-AMP
                     cyclohydrolase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-AMP cyclohydrolase"
                     /protein_id="HFC3980498.1"
                     /translation="MDKNLLEAVKFDEKGLVCAIAQDAETKRVLMVAWMNAEALQKTV
                     ETGFAHYYSRSRQKQWMKGEESGHTQKVRELRLDCDGDTIVMLIAQNGGIACHTGRES
                     CFYKKWNGGAWETADAVLKDEKEIYGSTH"
     gene            complement(3015..3782)
                     /gene="hisF"
                     /locus_tag="ACFJAG_001217"
     CDS             complement(3015..3782)
                     /gene="hisF"
                     /locus_tag="ACFJAG_001217"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HFC3980499.1"
                     /translation="MALAKRIIPCLDVKDGRVVKGVNFIGLRDAGDPVEAAKRYNGEG
                     ADELTFLDITASSDNRDTILHIIEEVAGQVFIPLTVGGGVRTVADIRRLLNAGADKVS
                     INTAAVTRPDLINEAAGFFGSQAIVAAVDAKAVNPENTRWEIFTHGGRNPTGLDAVEW
                     AVEMQKRGAGEILLTGMDRDGTKQGFNLPLTRAVAEAVDIPVIASGGVGNVRHLIEGI
                     TEGKADAVLAAGIFHFGEITIREAKRTMREAGIEVRL"
     gene            complement(3795..4532)
                     /gene="hisA"
                     /locus_tag="ACFJAG_001218"
     CDS             complement(3795..4532)
                     /gene="hisA"
                     /locus_tag="ACFJAG_001218"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003949 -
                     1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HFC3980500.1"
                     /translation="MLLIPAIDLKEGRCVRLKQGLMEEATVFSDSPADTALHWFEQGA
                     RRLHLVDLNGAFAGVPQNLPAIKDILAAVAKDIPVQLGGGMRDLKTIGQYLDLGLNDV
                     IIGTAAVKNPDLVREACKAFPGRIIVGLDAKDGMAAIDGWATVTGHHVIDLAKRFEDD
                     GVNSIIYTDIGRDGMMSGVNIDATVKLAQSVRIPVIASGGLTGLDDIRALCAAEKHGV
                     AGAITGRAIYEGSIDFAQAQQLADSLD"
     gene            complement(4565..5203)
                     /gene="hisH"
                     /locus_tag="ACFJAG_001219"
     CDS             complement(4565..5203)
                     /gene="hisH"
                     /locus_tag="ACFJAG_001219"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HFC3980501.1"
                     /translation="MQTAIIDYGMGNLHSVLKSVRTAGQLAGKNTKIFLSGDPDRVSR
                     ADKVIFPGQGAMPDCMAALTRGGLDEAVKDALKNKPFFGICVGAQLLFDHSEEGNTDG
                     LGWFGGKVRRFARDLRDPQGCRLKVPHMGWNTVRQTQNHPLFQGIPQNTRFYFVHSYY
                     FAPENPETILGESDYPSPFACIVGKDNVFATQFHTEKSHDAGLTMLKNFLNW"
     gene            complement(5333..6835)
                     /gene="pta"
                     /locus_tag="ACFJAG_001220"
     CDS             complement(5333..6835)
                     /gene="pta"
                     /locus_tag="ACFJAG_001220"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016407 - acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HFC3980502.1"
                     /translation="MAKVLVVPVSAGLNTSAAAQAFAKALDAQVFQAVDATAETLLTQ
                     GKSDDWFDALVGKVAALDAANLVIEGIAPDADKIYLAGKNVELALSLDAAAVFAVRSD
                     NTDADALAHQLNLAKQFFAAAPGVLEGFVVDGAAASVAEAAAEKTGLTFFGSSDALKD
                     VSVLAGREAKRLSPAQFRYNLIDFARQAGKRIVLPEGAEPRTVQAAAICHEKGIARCV
                     LLAKREEVEAVAKERGISLPDSLEIIDPASLVEQYVEPMCELRKSKGLTPEDARKQLQ
                     DTVVLGTMMMAQNDVDGLVSGAVHTTANTIRPALQLIKTAPGASLVSSVFFMLLPNQV
                     LVFGDCAVNPNPTAQQLADIAIQSADSAKAFGIDPKVAMISYSTVNSGSGPDVDTVIE
                     ATKLAREKRPDLAIDGPLQYDAATVPGVGKSKAPGSPVAGQATVLVFPDLNTGNCTYK
                     AVQRSANVLSVGPLLQGLRKPVNDLSRGALVEDIVFTIALTAVQAKQMEG"
     gene            complement(7020..8078)
                     /gene="fbpC"
                     /locus_tag="ACFJAG_001221"
     CDS             complement(7020..8078)
                     /gene="fbpC"
                     /locus_tag="ACFJAG_001221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter ATP-binding protein FbpC"
                     /protein_id="HFC3980503.1"
                     /translation="MTAALHIGHLSKSFQNTPVLNDISLSLDPGEILFIIGASGCGKT
                     TLLRCLAGFEQPDSGEISLSGKTIFSKNTNLPVRERRLGYLVQEGVLFPHLTVYRNIA
                     YGLGNGKGRTAQERQRIEAMLELTGISELAGRYPHELSGGQQQRVALARALAPDPELI
                     LLDEPFSALDEQLRRQIREDMIAALRANGKSAVFVSHDREEALQYADRIAVMKQGRIL
                     QTASPHELYRQPADLDAALFIGEGIVFPAALNADGTADCRLGRLPVQSGAPAGTRGTL
                     LIRPEQFSLHPHSAPAASIHAVVLKTTPKARHTEISLRAGQTVLTLNLPSAPTLSDGI
                     SAVLHLDGPALFFPGNTL"
     gene            complement(8099..9616)
                     /gene="fbpB"
                     /locus_tag="ACFJAG_001222"
     CDS             complement(8099..9616)
                     /gene="fbpB"
                     /locus_tag="ACFJAG_001222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter permease FbpB"
                     /protein_id="HFC3980504.1"
                     /translation="MSPKKIPIWLTGLILLIALPLTLPFLYVAMRSWQVGINRAVELL
                     FRPRMWDLLSNTLTMMAGVTLISIVLGIACALLFQRYRFFGKTFFQTAITLPLCIPAF
                     VSCFTWISLTFRVEGFWGTVMIMSLSSFPLAYLPVEAALKRISLSYEEVSLSLGKSRL
                     QTFFSAILPQLKPAIGSSVLLIALHMLVEFGAVSILNYPTFTTAIFQEYEMSYNNNTA
                     ALLSAVLTAVCGIVVFGESIFRGKAKIYHSGKGVARPYPVKTLKLPGQIGAIVFLSSL
                     LILGIIIPFGVLIHWMMVGTSGTFALVSVFDAFIRSLSVSALGAILTILCALPLVWAS
                     VRYRNFLTVWIDRLPFLLHAVPGLVIALSLVYFSINYTPAVYQTFIVVILAYFMLYLP
                     MAQTTLRTSLEQLPKGMEQVGATLGRGHFFIFRTLVLPSILPGITAAFALVFLKLMKE
                     LTATLLLTADDVHTLSTAVWEYTSDAQYAAAAPYALMLVLFSGIPVFLLKKYAFK"
     gene            complement(9684..10679)
                     /gene="fbpA"
                     /locus_tag="ACFJAG_001223"
     CDS             complement(9684..10679)
                     /gene="fbpA"
                     /locus_tag="ACFJAG_001223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter substrate-binding protein
                     FbpA"
                     /protein_id="HFC3980505.1"
                     /translation="MKTSIRYALLAAALTAATPALADITVYNGQHKEAAQAVADAFTR
                     ATGIKVKLNSAKGDQLAGQIKEEGSRSPADVFYSEQIPALATLSAANLLEPLPASTIN
                     ETRGKGVPVAAKKDWVALSGRSRVVVYDTRKLSEKDLEKSVLNYATPKWKNRIGYVPT
                     SGAFLEQIVAIVKLKGEAAALKWLKGLKEYGKPYAKNSVALQAVENGEIDAALINNYY
                     WHAFAREKGVQNVHTRLNFVRHRDPGALVTYSGAAVLKSSQNKDEAKKFVAFLAGKEG
                     QRALTAVRAEYPLNPHVVSTFNLEPIAKLEAPQVSATTVSEKEHATRLLEQAGMK"
     gene            complement(10931..11411)
                     /locus_tag="ACFJAG_001224"
                     /pseudo
     CDS             complement(10931..11411)
                     /locus_tag="ACFJAG_001224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255805.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4375 domain-containing protein"
     gene            complement(11469..12845)
                     /gene="argH"
                     /locus_tag="ACFJAG_001225"
     CDS             complement(11469..12845)
                     /gene="argH"
                     /locus_tag="ACFJAG_001225"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004056 - argininosuccinate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HFC3980506.1"
                     /translation="MHDKTWSGRFNEPVSELVKQYTASIGFDQRLAEWDIQGSLAHAQ
                     MLTRSGVLSENDLTDIRRGMSEILEEIRSGKIEWPLDLEDVHMNIERRLTDKIGDAGK
                     RLHTGRSRNDQVATDIRLWLRDQITVIQNLIQNLQTALLDLAEQNAETVMPGFTHLQV
                     AQPVSFGHHMLAYVEMLGRDFERMADCRKRVNRMPLGAAALAGTTYPIQREITAELLG
                     FEQICQNSLDAVSDRDFAIEFTAAASLVMVHLSRLSEELILWMSPRFGFIDIADRFCT
                     GSSIMPQKKNPDVPELVRGKSGRVIGHLIGLITLMKSQPLAYNKDNQEDKEPLFDTAD
                     TLIDTLRIYADMMRGVTVKPGNMRAAVMQGFATATDLADYLVKKGMPFRDAHEVVAQA
                     VRHADEAGVDLSELPLEALQGFSKLISDDVYGVLTPEGSLNARNHLGGTAPEQVRLQV
                     KRWREMSA"
     gene            complement(12864..13733)
                     /gene="galU"
                     /locus_tag="ACFJAG_001226"
     CDS             complement(12864..13733)
                     /gene="galU"
                     /locus_tag="ACFJAG_001226"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003983 - UTP:glucose-1-phosphate
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0006011 - UDP-glucose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HFC3980507.1"
                     /translation="MKPIKKAVFPVAGMGTRFLPATKANPKEMLPIVDKPLIQYAVEE
                     AVEAGCTEMVFVTGRNKRSIEDHFDKAYELETKLEMRHKDKLLEHVRNILPPNITCLY
                     IRQAEALGLGHAVLCARAAIGDEPFAVILADDLIDAPKGALKQMVEVYGRSGNSILGV
                     ETVEPSQTGSYGIVETEQLKQFQRITGIVEKPKPEDAPSNLAVVGRYILTPRIFDLLT
                     GLPRGAGNEIQLTDGIAKLLDHEFVLAHPFEGTRYDCGSKLGYLEATVAYGLKHPETG
                     EPFRRLLEKYRTE"
     gene            complement(13761..14360)
                     /gene="rdgB"
                     /locus_tag="ACFJAG_001227"
     CDS             complement(13761..14360)
                     /gene="rdgB"
                     /locus_tag="ACFJAG_001227"
                     /EC_number="3.6.1.66"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035870 - dITP diphosphatase activity
                     [Evidence IEA];
                     GO_function: GO:0036222 - XTP diphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RdgB/HAM1 family non-canonical purine NTP
                     pyrophosphatase"
                     /protein_id="HFC3980508.1"
                     /translation="MSEKPEKIVLASGNAGKLKEFGNLFKPYGITVLPQSAFGIPECP
                     EPYPTFVENALAKARHAAGHSGLPALADDSGICAAALNGAPGIHSARYAGSNPKSDTA
                     NNLKLAAELAGKADKSCSYVCVLVFVRHKDDPRPIIAEGIWHGQWHDTPLGQNGFGYD
                     PYFYLPEHGKTAAELDSEVKNRESHRAQALADLIRKLAL"
     gene            complement(14353..14586)
                     /locus_tag="ACFJAG_001228"
     CDS             complement(14353..14586)
                     /locus_tag="ACFJAG_001228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NGO_0222 family membrane protein"
                     /protein_id="HFC3980509.1"
                     /translation="MNRRKIYLLSVALFTLAFMLPVLLGAYLLTAGSKAFAVASFLFA
                     FGALFGQIGALALYLRHKSLRAAPSSSQGNRYV"
     gene            complement(14694..15227)
                     /locus_tag="ACFJAG_001229"
     CDS             complement(14694..15227)
                     /locus_tag="ACFJAG_001229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HFC3980510.1"
                     /translation="MADFNQILTPGDVDGGIINVVNEIPAGSNHKIEWNRKLAAFQLD
                     RIEPAIFAKPTNYGFIPQTLDEDGDELDVLLVTEQPLATGVFLEARVIGVMKFVDDGE
                     VDDKIVCVPADDRNNGNAYKTLSDLPQQLIKQIEFHFNHYKDLKKAGTTKVESWGGAE
                     EAKKVIKESIERWNKQA"
     gene            complement(15329..15787)
                     /gene="nudB"
                     /locus_tag="ACFJAG_001230"
     CDS             complement(15329..15787)
                     /gene="nudB"
                     /locus_tag="ACFJAG_001230"
                     /EC_number="3.6.1.67"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008828 - dATP diphosphatase activity
                     [Evidence IEA];
                     GO_function: GO:0019177 - dihydroneopterin triphosphate
                     pyrophosphohydrolase activity [Evidence IEA];
                     GO_process: GO:0046656 - folic acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin triphosphate diphosphatase"
                     /protein_id="HFC3980511.1"
                     /translation="MPMAKPLKYPVSALVVLYSGDGGILLIERTHPKGFWQSVTGSLE
                     PGETVAQTARREVWEETGILLEDGQLQDRHDSTVYEIYHHWRHRYPKGVFENREHVFR
                     AEIPRDTPVVLQPEEHVSYGWFGLEEAAEKVFSPSNRRAILELGRFLGKR"
     gene            15998..16074
                     /locus_tag="ACFJAG_001231"
     tRNA            15998..16074
                     /locus_tag="ACFJAG_001231"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:16032..16034,aa:Pro,seq:ggg)
     gene            16337..18223
                     /gene="mafB"
                     /locus_tag="ACFJAG_001232"
     CDS             16337..18223
                     /gene="mafB"
                     /locus_tag="ACFJAG_001232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 2"
                     /protein_id="HFC3980512.1"
                     /translation="MGISRKISLILSILAVCLPMHAHASDLANDPFIRQVLDRQHFEP
                     DGKYHLFGSRGELAERSGHIGLGNIQSHQLGNLMIQQAAIKGNIGYIVRFSDHGHEVH
                     SPFDNHASHSDSDEAGSPVDGFSLYRIHWDGYEHHPADGYDGPQGGGYPAPKGARDIY
                     SYDIKGVAQNIRLNLTDNRSTGQRLADRFHNAGAMLTQGVGDGFKRATRYSPELDRSG
                     NAAEAFNGTADIVKNIIGAAGEIVGAGDAVQGISEGSNIAVMHGLGLLSTENKMARIN
                     DLADMAQLKDYAAAAIRDWAVQNPNAAQGIEAVSNIFTAVIPVKGIGAVRGKYGLGGI
                     TAHPVKRSQMGAIALPKGKSAVSDNFADAAYAKYPSPYHSRNIRSNLEQRYGKENITS
                     STVPPSNGKNVKLADQRHPKTGVPFDGKGFPNFEKHVKYDTKLDIQELSGGGIPKAKP
                     VFDAKPRWEVDRKLNKLTTREQVEKNVQETRRRSQSSQFKAHAQREWENKTGLDFNHF
                     IGGDINKKGTVTGGHSLTRGDVRVIQQTSAPDKHGVYQATVEIKKPDGSWEVKTKKGG
                     KVMTKHTMFPKDWDEARIRAEVTSAWESRIMLKDNKWQGTSKSGIKIEGFTEPNRTAY
                     PIYE"
BASE COUNT         3816 a         4489 c         5600 g         4413 t
ORIGIN      
        1 ttccaaaacc gcacgcccga aatccacgaa acctgcatga tagacgaggc gtgcgtcgtc
       61 atcggcgaag tctcgcttgc cgaagatgtt tccgtgtggc cgtgcgccgt gttgcgcggc
      121 gatgtgaaca gcatcaccgt cggcgcgcgc agcaatatac aggacggcag cgtcctgcac
      181 gtttcccaca aaaccgccgc caaacccgaa gggtcgccgc tggttatcgg cgaagacgtt
      241 accgtggggc acaaagtgat gctgcacggc tgccgaatcg gtaaccgcgt cttggtcggt
      301 atgggcagca ccgttttgga cgatgccgtt attgaagatg acgtgatgat cggcgcgggc
      361 agcctcgttc cgccgcgcaa acgtttggag ggcggctatc tttatatcgg ttcgcctgtg
      421 aggcaggttc gtctgctgac cgatgaggaa aaagcctttt tgaaatattc cgccgcacat
      481 tatgtgaagc tgtcgaaaca gtacgggatg tgaaatcaca tcggcgttct tgcgtcaacc
      541 ccaaattcac gcggttggac gcacccgatg atgattccga tgcgccttga ttttgaccgg
      601 ctgcgtttga gttgcaggca aaaatgccgt ctgaaagcct ttttttcggc ttcggacggc
      661 attttattgc cgatttcttt ttagagtttg accgaatgtt cgcgcgtttc gtggaacacg
      721 atgtccggcc aacgttcttg cgtcagtccc aaattcacgc gcttggacgc acccgatgat
      781 gattccgatg cgccttgatt ttgatcggtg catttgaatt gcaggcaaaa atgccgtctg
      841 aagccctttt ttcgggttcg gacggcattt tattgccgat ttctttttag agtttgaccg
      901 aatgttcgcg cgtttcgtgg aacacgatgt ccggccagcg ttcttgcgtc aaccccaaat
      961 tcacgcggtt gggggcgagg taggcgaggt tgccgcctgc gtcgatggcg aggttgcctg
     1021 cgttggcttt ttcaaattcc gccagttttt tcttgtcgtc gcacgatacc cagcgcgccg
     1081 accagatgga tgcgctgtcg aacacggctt ccacgccgta ttcgttggcg aggcgtgagg
     1141 ttacgacttc aaactgcaac acgccgaccg cacccaaaat caaatccgcg ccgctcatcg
     1201 gtttgaatac ttgaaccgca ccttcttcgc cgagttgttg caaacctttt tgcagttgtt
     1261 tgattttcag cgggtttttg atgcggacgc tgcggaacag ttcgggcgcg aagaatggga
     1321 tgccggtaaa cgccagttgt tcgccttcgg agaagctgtc gccgatttgg atgttgccgt
     1381 ggttcgggat gccgatgatg tcgccggcgt aggcttcttc cgccagttcg cggttgtgcg
     1441 acatgaaggt tactacgctg gaggcggcga tttcgcggtt gatacgcagg tgtttcatct
     1501 tcatgccgcg ctcgaattta ccggagcaga cgcgcaagaa ggcgatacgg tcgcggtgtt
     1561 tcgggtccat attggcttgg attttaaaga taaatccgga aaatttcggc tcgtccggcc
     1621 cgaccatgcg catggtcgcg tcgcgcggtt tcggtgcggg tgcccagtca atcaatgaat
     1681 tgaggatttc ctgaatgccg aagttgttaa tcgcagagcc gaagaacact ggcgtgagtt
     1741 cgccggcgag aaattcgtcg agattaaatt cgttggaagc cgcctgcacc aattcgattt
     1801 cgtcgcgcaa ctgctggatt tccaacggaa agcgttgttc caattcggga ttgtttatgc
     1861 ctttgatgat gtcgaactcg tgcggcaggc gttcgccgcc cgcttcaaag agatagattt
     1921 cgtcgttcag gatgtggtac acgcccttga agtttttgcc cataccgatc ggccaggtaa
     1981 cgggtgcgca gcggatttgc aggatgtctt ccacttcgtc caagagttcc aaagaatcgc
     2041 gcacttcgcg gtcgtatttg ttcatgaagg taacaatcgg cgtatcgcgc aggcggcaga
     2101 cgttcaagag tttgatggtt tgcgcttcca cgccttttgc cgcgtcgatg accatcaagg
     2161 cgctgtccac tgcggttaaa acgcggtagg tgtcttcgga gaagtcttgg tgtcccggcg
     2221 tgtccaagag gttgacggtg tggtctttgt agtcgaactg catcacgctt gatgccacgg
     2281 aaatgccgcg ctgcttctcg atgtccatcc agtcggaggt ggcgaatttg ccggttttct
     2341 tacctttcac cgtgcctgcg ctttgaatcg cgcccgaaaa cagcagcagt ttttcggtca
     2401 gcgtggtttt acccgcatcg gggtgggaga tgatggcaaa cgtgcggcgg cggcgcactt
     2461 ggtcgaggat ttcttgggac atggttttct ttgcaaaaag gttcaggccg cttttcagac
     2521 ggcccggaca gtgtttgaga cggcgaaatt gtacaaaaaa atgcctgata attcaatgtt
     2581 ggaggcggtc agtgcgtgct gccgtaaatc tctttttcgt ctttcaggac ggcatcggcg
     2641 gtttcccacg caccgccgtt ccattttttg taaaagcagc tttcgcgccc ggtgtggcag
     2701 gcgatgccgc cgttttgggc gatgagcatc acaatggtat cgccgtcgca gtcgaggcgc
     2761 agttcgcgga ctttttgcgt gtgtcccgac tcttcgccct tcatccattg tttttggcgc
     2821 gaacggctgt aatagtgggc aaagccggtt tcgacggttt tttgcagggc ttcggcgttc
     2881 atccacgcca ccattaaaac acgtttggtt tcggcatctt gggcgatggc gcaaaccaaa
     2941 cctttttcgt caaatttgac ggcttcaagc aggtttttat ccatatttcc tttcagacgg
     3001 catagtcggg gcggtcagag gcgcacttcg atgccggctt cgcgcatagt gcgtttggct
     3061 tcgcggatgg tgatttcccc gaaatggaaa atgccggcgg caagtacggc atcggctttg
     3121 ccttcggtta tgccttcaat caggtgccgg acattgccga ccccgccgga ggcgatgacg
     3181 gggatgtcga cggcttcggc aacggcgcgg gtcagcggca ggttgaaacc ctgtttcgtc
     3241 ccgtccctgt ccataccggt gagcaggatt tcgcccgcgc cgcgtttttg catttcgacc
     3301 gcccattcca ccgcatccaa accggtcgga ttgcgcccgc cgtgggtaaa gatttcccag
     3361 cgtgtgtttt cggggttgac ggctttggca tcgacggcgg cgacgatggc ttgcgaaccg
     3421 aaaaatccgg cggcttcgtt aattaaatcg ggacgggtaa cggcggcggt gttgatgctg
     3481 actttgtccg cgccggcatt gagcaggcgg cggatgtcgg caacggtgcg tacgccgccg
     3541 ccgacggtca gcgggatgaa gacttgtccg gcaacctctt cgatgatgtg caggatggtg
     3601 tcgcggttgt cggatgaggc ggtgatgtcg aggaaggtca attcgtccgc gccttcgccg
     3661 ttgtagcgtt tggcggcttc gacggggtcg cccgcgtcgc gcaaaccgat gaagttcacg
     3721 cctttgacga cgcgcccgtc ttttacgtcg agacagggga tgatgcgttt tgccagtgcc
     3781 ataatcggat gcctttagtc gagggaatct gccagttgct gcgcttgggc aaaatcgatg
     3841 ctgccctcgt aaatcgcgcg accggtaatc gcgcctgcta cgccatgttt ttcggcggca
     3901 cacagggcgc ggatgtcgtc caagccggtc agtccgccgg aggcgatgac gggaatgcgg
     3961 acggattggg cgagtttgac cgtcgcgtcg atgttcacgc cgctcatcat accgtcgcgc
     4021 ccgatgtcgg tgtagatgat gctgttgaca ccgtcgtctt caaagcgttt tgccaaatca
     4081 attacatgat gcccggttac ggttgcccag ccgtcgatgg cggccatacc gtctttggca
     4141 tccagtccga cgataatcct gccggggaag gctttgcacg cttcgcgcac caagtcgggg
     4201 tttttgactg ccgccgtgcc gataatcacg tcgttcagtc ccaaatccaa atattgtccg
     4261 atggttttca aatcgcgcat gccgccgccg agctgcacgg ggatgtcttt ggcgacggcg
     4321 gcgaggatgt ctttgatggc gggcaggttt tgcggaacgc cggcaaatgc gccgttcaaa
     4381 tctaccaggt gcaggcggcg cgcgccttgt tcgaaccagt gcagcgcggt gtcggcgggc
     4441 gaatcggaaa agacggtcgc ctcttccatc agcccttgtt tcaagcggac gcaacgtcct
     4501 tctttcaaat cgatggcggg tatcagcagc atagtttttc tccttgtgcg gggccgtgtc
     4561 cggcttacca gtttaaaaag tttttcaaca tcgtcagccc ggcatcgtgg cttttttcgg
     4621 tgtgaaattg cgtggcgaat acgttgtctt tgccgacgat gcaggcaaac ggggacgggt
     4681 agtcgctttc gcccaatatg gtttcgggat tttcgggggc gaaatagtag ctgtggacga
     4741 aataaaaacg cgtgttttgg gggatgcctt gaaaaagcgg gtggttttgg gtttggcgca
     4801 cggtgttcca gcccatatgc gggactttca gacggcatcc ctgcgggtcg cggaggtcgc
     4861 gggcaaagcg tctgactttg ccgccgaacc agcccaagcc gtcggtgttt ccttcttcgc
     4921 tgtggtcgaa taaaagttgc gcaccgacgc agattccgaa aaacggtttg ttttttaagg
     4981 cgtctttgac tgcctcgtcc aagccgccgc gcgtcagtgc cgccatacag tcgggcatcg
     5041 cgccctgccc gggaaaaatg actttgtcgg cgcgggacac gcggtcgggg tcgccgctta
     5101 aaaagatttt ggtatttttt ccggcaagct gccccgccgt ccggacggat ttcaatacgg
     5161 aatgcaggtt gcccataccg taatcgataa tggcggtttg catggcttcc tcctcttttt
     5221 tgcaatatgg ctgcgatttt aacaaacaaa tgtgccgggc tgataaaaat gccgtctgaa
     5281 aacgggaatc tgtcttcaga cggcataggg ttcaaacccg gaaagccgtt tgtcagcctt
     5341 ccatttgttt tgcctgaacg gcagtcaggg cgatggtgaa cacgatgtct tccaccagcg
     5401 cgccgcgaga caggtcgttg accggtttgc gcaggccttg cagcagcggg ccgacgctca
     5461 agacgttggc actgcgttgg acggctttat aggtgcagtt gccggtgttc aggtcgggga
     5521 agaccaaaac ggttgcctgt cctgccaccg ggctgcccgg ggctttggat ttgcctacgc
     5581 ccggcacggt tgccgcgtca tattgcagcg ggccgtcgat ggcgaggtcg gggcgttttt
     5641 cccgggcaag tttggtggct tcgatgacgg tatcgacatc ggggccgctg ccggagttga
     5701 cggtggagta ggaaatcatc gccactttcg ggtcgatgcc gaaggctttt gcggaatcgg
     5761 cagactggat ggcgatgtcg gcaagctgtt gcgcggtcgg gttcggatta accgcgcagt
     5821 cgccgaacac cagaacctga tttggtagca gcataaagaa tacgctggat acgaggcttg
     5881 cgcccggtgc ggttttaatc agttgcaaag cggggcggat ggtgttggcg gtggtgtgaa
     5941 ccgcaccgga taccaaaccg tccacatcat tttgcgccat catcatcgta ccgagtacca
     6001 cggtgtcttg cagttgcttg cgcgcgtctt cgggtgtcag gcctttggat ttgcgcagtt
     6061 cgcacatcgg ctcgacgtat tgttcgacca atgaggcggg atcgatgatt tccaaagagt
     6121 cgggcaggct gatgccgcgt tctttggcaa cggcttcgac ttcttcgcgt ttggcaagca
     6181 ggacgcagcg ggcaatgcct ttttcgtggc agatggcggc ggcttggacg gtgcggggtt
     6241 ctgcgccttc aggcaggacg atgcgtttgc cggcttggcg ggcgaagtcg atcaggttgt
     6301 agcggaattg cgccggcgac aggcgttttg cttcgcggcc tgccaatacg gatacgtctt
     6361 tcagcgcgtc gctcgaaccg aagaaggtca ggccggtttt ctcggctgcc gcttcggcaa
     6421 cggaggctgc cgcaccgtcc acgacaaaac cttccaatac gcccggcgcg gcggcgaaga
     6481 actgtttggc aaggttcaat tggtgtgcca gcgcgtcggc atcggtattg tcggaacgga
     6541 cggcgaagac ggctgccgcg tcaagggaca atgccagttc gacgtttttg cctgcgagat
     6601 agattttgtc ggcatcgggc gcgatgcctt cgatgacgag gttggcggca tcgagtgcgg
     6661 caactttgcc gaccagtgcg tcgaaccagt cgtcgctttt gccttgcgtg agcagggttt
     6721 cggcggttgc gtcaacggct tggaaaactt gtgcgtccag tgcttttgca aaggcttgtg
     6781 cggcggcgga ggtgttcagt ccggcagata cgggtacgac gagtactttt gccataatat
     6841 atcctttcgt atgctgcggt gtgcggcata tgtggttgga aggggcggca tatgggcaga
     6901 aacggctgcc tgcgtgccgt gcgtgccgtg tttggcttgg ggcgcgcagg ttgaatatag
     6961 caaacaaatt ctgtttccaa caagataaat atccgcaggc ttgtggatgc tgccgccttt
     7021 cagagggtat ttccggggaa gaacagggcg ggaccgtcca aatggaggac ggcggaaatg
     7081 ccgtctgaca gggtgggggc ggaagggagg ttgagcgtga ggacggtttg tccggccctg
     7141 aggctgattt cggtatgccg cgctttgggc gtggttttga gaaccacggc gtgaatggag
     7201 gcggcgggtg cggaatgggg gtgaaggctg aactgttccg gacggatgag cagtgtaccg
     7261 cgcgtgcctg cgggtgcgcc gctttggacg ggcaggcggc ccaatctgca atcggcggtg
     7321 ccgtcggcgt tgagcgcggc ggggaacacg atgccttcgc cgataaacag ggcggcatca
     7381 aggtcggcag gttgtcggta caattcgtga gggcttgcgg tttggaggat gcgcccctgt
     7441 ttcatcacgg caatccggtc ggcgtattgc agggcttctt cgcggtcgtg gctgacaaaa
     7501 acggcggatt ttccgttggc gcgcagggcg gcaatcatgt cttcgcgaat ctggcggcgc
     7561 aactgttcgt ccagcgcgct gaagggttcg tccaacaaaa tcagttcggg gtcgggggcg
     7621 agggcgcggg cgagggcgac gcgctgttgt tgtccgcccg aaagttcgtg cggatagcgt
     7681 ccggcaagtt cggaaatgcc ggtcaattcc aacatggctt cgatgcgctg tcgctcttgc
     7741 gccgtcctgc ctttgccgtt gccgagaccg taggcgatat tgcggtaaac ggtcaggtgg
     7801 gggaacagca cgccttcctg tacgaggtaa cccaaacggc gttcgcggac gggaaggttg
     7861 gtatttttcg agaagatggt tttgccggaa agcgaaattt cgccggaatc gggttgttcg
     7921 aaaccggcaa ggcagcgtaa aagggtggtt ttgccgcagc cggacgcgcc gatgataaag
     7981 agaatttcgc ccgggtcgag gctgagcgaa atgtcgttta aaaccggggt gttttgaaaa
     8041 cttttggaca ggtgtccgat gtgcagggcg gcggtcatag cggtgcttcc tcaagctgtt
     8101 atttgaaggc gtatttcttc agcaggaata cgggtatgcc ggaaaataat accagcatca
     8161 gcgcgtaagg ggcggcggcg gcgtattgtg cgtccgatgt gtattcccaa acggcggtgg
     8221 agagcgtgtg gacatcgtcg gcggtcagca gcagggtggc ggtcaactct ttcatcagct
     8281 tgaggaagac gagtgcgaat gcggcggtaa tgccgggcag gatggacggc agtaccaacg
     8341 tcctgaaaat aaagaagtgt ccgcgcccca atgttgcgcc gacctgttcc atccctttgg
     8401 ggagttgttc caaggaagtc ctcagggtgg tttgcgccat cggcaggtaa agcatgaaat
     8461 aggcaaggat gacgacgata aaggtttggt aaacggcagg ggtgtagttg atgctgaaat
     8521 aaaccaagga tagggcgata accaaaccgg ggacggcgtg cagtaaaaac ggcagcctgt
     8581 ctatccaaac ggttaaaaaa ttgcgatagc gaaccgatgc ccaaacaagg ggcaaggcac
     8641 ataatatagt caaaatcgca cctaaagccg atacgcttaa ggaacggata aaggcatcaa
     8701 atacggatac gagcgcgaat gtgccggaag tgccgaccat catccaatgt atcaatacgc
     8761 caaaggggat aataatgccc aaaatcaaca agctgcttaa aaaaacaatc gcgccgatct
     8821 gaccgggcag tttgagggtt ttgacgggat aaggacgggc aacgcctttg ccgctgtggt
     8881 aaatcttggc tttgccgcga aatatgcttt ctccaaatac gacgatgccg cacaccgccg
     8941 tcaaaacagc ggaaagcagg gcggcggtat tgttgttgta ggacatttcg tattcttgga
     9001 aaatggcagt ggtaaaagtg gggtagttca aaatggatac cgcgccaaat tcgaccagca
     9061 tatgcagggc gatcagtaac acgctgctgc cgatggcggg tttgagctgc gggaggatgg
     9121 cggaaaaaaa ggtttgcagg cggcttttgc ccaaggacag gctgacttct tcgtaagaca
     9181 ggctgatgcg tttgagtgcc gcctcgacgg gcaggtaggc gagcggaaac gaggacaggc
     9241 tcataatcat cactgtcccc caaaagcctt cgacgcggaa ggtcaggctg atccaggtga
     9301 aacagctgac aaatgcgggg atgcacaaag gcagggtgat tgccgtctga aaaaaggttt
     9361 tgccgaagaa gcggtaacgt tggaacaaaa gggcgcaggc aatgcccaaa acaatggaaa
     9421 tcagggtaac gcccgccatc atcgtcaagg tgttggagag caaatcccac atacgcgggc
     9481 ggaacaacag ttcgacggcg cggttgatgc cgacctgcca cgaacgcata gcgacatata
     9541 aaaaaggcag ggtaagcggc agggcgatca gtaggatgag gccggtaagc caaatgggta
     9601 tttttttagg agacatagtg tttttcatcg gcaaaacggg cggacagtat aaatgtccgc
     9661 ccgtttgaca atccgaaaac ggcttatttc ataccggctt gctcaagcag ccgggtggcg
     9721 tgttcttttt cggaaacagt ggtggcggac acttggggtg cttccaactt ggcgatgggt
     9781 tccaaattga aggtggatac cacgtgcgga ttcaaaggat attcggcacg gacggcggtc
     9841 agggcgcgct gtccttcctt gccggcgagg aaggcgacga attttttcgc ctcatccttg
     9901 ttttgggagg attttaacac ggctgcgccg gaataggtaa cgagtgcgcc gggatctctg
     9961 tggcggacga aattcaggcg ggtgtggaca ttttgtacgc ctttttcacg cgcgaaagcg
    10021 tgccagtagt agttgttgat gagggcggca tcgatttcgc cgttttcaac cgcttgaagg
    10081 gcgacggagt ttttagcgta aggcttgccg tattctttca gacctttgag ccatttcaat
    10141 gcggccgctt cgcctttcag tttgacgatg gcgacaatct gttccaagaa cgcgccggaa
    10201 gtggggacgt aaccgatgcg gtttttccat ttcggcgtgg cgtaattcag gacggatttt
    10261 tccaaatctt tttcagacag tttgcgggtg tcgtaaacga cgacgcgcga acgtccgctc
    10321 agtgccaccc agtctttttt ggcggcaacc ggcacgcctt tgccgcgtgt ttcgttgatg
    10381 gtggaggcgg gcaggggctc taggaggttg gctgcggaaa gggtggcgag tgccgggatt
    10441 tgttcggaat agaatacgtc ggcggggctt cggctgcctt cttctttgat ttggccggca
    10501 agctggtcgc ctttggcact gttgagtttg actttgatgc cggtagcccg ggtaaaggca
    10561 tctgcaacgg cttgtgccgc ttctttgtgt tggccgttgt acacggtaat gtctgccagc
    10621 gcgggggtgg cggcggtcag ggctgcggca agcagtgcgt atcggataga tgttttcata
    10681 tcgattttct cctaaatgaa tgagggtgta taccttgtta agacataacg gggtgtagtg
    10741 tattccttct tttttataaa tgcaaataat tattttttaa atttgttatt atccgatccg
    10801 gttattgttt gttctgactt gtattttttc cgtgcatcgc gcccgtaagg cggaagcggc
    10861 gggcaatgtg tggcggaatg tgggtaaagg cggcattttg atttgtcgga atgctggaga
    10921 acctctccct ttaaaacgcc gtctgaacaa ggttgccgga atagtattgc catcccggca
    10981 gatacagttt gtcgggatct tgccaatatt gttcatccag actgttcggc agcgaggcgg
    11041 ttttgttgtc gagatgtttt gttaatccac tatatatccc acatttcttt taggttttta
    11101 ccttccgatt ggaggtggcg gatttctttt cccaatgcgt ctgccgcccg atggatcagc
    11161 attgcgctgt gtaccgcgcc gatttttttc agaacggaac aagtcttttc ggcggcggga
    11221 agaccccagt tgcagacaaa ttgcagtatg ccgccgttgc cgatgtcggc ttccgcccgc
    11281 caaatcaaaa ccagctcctg ttcccgtccg tccatgcttt cgagtttgcc gtcatgctgt
    11341 tcaaaaagtt tgtccaccgc ctgccgcatc atctgctcga agcggtcggc ttgggtatcc
    11401 gtatcggtca tagtattctt gccttttaaa aatgccgtct gaacatttct tcagacggca
    11461 tttgggggtt aagctgacat ttcccgccag cgtttgactt ggaggcgtac ctgttcgggc
    11521 gcggtgccgc ccaagtggtt gcgcgcgttg aggctgcctt cgggtgtcag aacgccgtac
    11581 acgtcgtctg aaatcagctt gctgaagcct tgcagggctt cgagcggcaa ttcgctcaaa
    11641 tcaacgccgg cttcatcggc gtggcgtacg gcttgggcga cgacttcgtg ggcatcgcgg
    11701 aagggcatac cttttttgac cagataatcc gccaagtcgg tggcggtggc aaaaccctgc
    11761 atcacggcgg cgcgcatatt gccgggtttg acggttacgc cgcgcatcat atcggcgtaa
    11821 atccgcagcg tgtcgatgag cgtgtcggcg gtgtcaaaca gcggttcttt gtcttcctga
    11881 ttgtctttgt tgtatgccaa gggctgcgat ttcatcaggg taatcaggcc gataaggtgt
    11941 ccgatgactc ggccggattt accgcgcacg agttcgggta cgtcggggtt tttcttttgc
    12001 ggcatgatgg acgaacccgt acagaagcgg tcggcgatgt cgataaagcc gaaacgcgga
    12061 ctcatccaca aaatcaattc ttcagacagg cggctcaagt gaaccataac cagcgaggcg
    12121 gcggcggtga actcaatggc aaaatcgcgg tcggatacgg catcgagcga gttctggcag
    12181 atttgttcga aacccaacaa ttcggcggtg atttcgcgct gaatcggata ggtcgtaccg
    12241 gcaagggcgg cagcgccgag cggcatacgg ttgacgcgtt tgcgacagtc ggccatgcgt
    12301 tcgaaatcgc gtccgagcat ttcgacgtag gcgagcatgt ggtgtccgaa gctgaccggc
    12361 tgggcgactt gcagatgggt aaaaccgggc atgacggttt cggcgttttg ttccgccaaa
    12421 tccaataatg ccgtctgaag gttttgaatc aggttttgga taacggtaat ctggtcgcgc
    12481 agccaaaggc ggatgtcggt ggcgacttgg tcgttgcggc tgcggccggt gtgcaggcgt
    12541 ttgcccgcgt cgccgatttt gtcggtcagg cggcgttcga tgttcatgtg gacatcttcc
    12601 aaatcgagcg gccattcgat tttgccgctg cggatttctt cgaggatttc cgacatgccc
    12661 cgacggatgt cggtcagatc gttttcactc agcacacccg accgggtcag catctgcgcg
    12721 tgggcgagcg agccttggat gtcccattcg gcaaggcgtt ggtcgaaacc gatggaggcg
    12781 gtgtattgtt tgacgagttc ggaaacgggt tcgttgaaac gtccggacca ggttttgtcg
    12841 tgcataagga ttccttgatg gggttattcg gtgcggtatt tttccaaaag gcggcggaag
    12901 ggttcgccgg tttcggggtg ttttaaaccg taggcgacgg tggcttcgag atagccgagt
    12961 ttgctgccgc agtcgtagcg cgtgccttca aaggggtgcg ccaagacaaa ttcgtgatcg
    13021 agcagcttgg cgatgccgtc tgtaagctgg atttcgttgc ccgcgccgcg cggcaggccg
    13081 gttaaaaggt cgaaaatgcg cggggtgagg atgtagcgtc cgacaacggc aaggttggag
    13141 ggcgcgtctt cgggcttggg tttttcgaca atgccggtaa tgcgttggaa ctgtttgagc
    13201 tgttcggttt cgacgatgcc gtatgagccg gtttgcgacg gttcgacggt ttctacgccc
    13261 aaaatgctgt taccgctgcg cccgtacact tcgaccattt gtttgagcgc gcctttgggc
    13321 gcatcgatta agtcgtcggc aaggatgacg gcgaagggtt cgtcgccgat ggcggcgcgg
    13381 gcgcacaaga cggcgtgtcc caatcccagt gcttccgcct gacggatgta gaggcaggta
    13441 atgttcggcg gcaggatgtt gcggacgtgt tccaacaatt tgtctttatg gcgcatttcc
    13501 aacttagttt cgagttcgta tgccttgtcg aaatggtctt cgatgctgcg cttgttgcgc
    13561 ccggtaacaa acaccatttc cgtgcagccg gcttccacgg cttcttctac ggcgtattgg
    13621 atcagcggct tgtcgacgat gggcagcatt tctttcgggt tggccttggt ggcgggcagg
    13681 aagcgggttc ccatccctgc aacggggaag acggcttttt ttatcggttt cattcttttt
    13741 cctttgtatg gttttgatgt ttaaagggcg agtttgcgga ttaaatcggc gagtgcctgc
    13801 gcgcggtggc tttcgcggtt tttgacctcc gaatccaatt cggcggcggt tttgccgtgt
    13861 tcgggcagat aaaaatacgg gtcgtaaccg aaaccgtttt gcccgagcgg cgtgtcgtgc
    13921 cattgtccgt gccatatgcc ctcggcgata atcgggcgcg ggtcgtcttt atgacggaca
    13981 aaaaccaata cgcagacata agaacaactt ttgtcggcct tgccggcaag ttcggcggca
    14041 agtttcaggt tgttggcggt atcggatttg ggattgctgc cggcgtaacg tgcggaatgg
    14101 atgcccggcg cgccgtttag ggcggcggca cagatgccgc tgtcgtcggc gagtgcgggc
    14161 agcccgctgt gtccggcggc gtgccgggct tttgccagcg cgttttcgac aaaggtggga
    14221 tagggttcgg ggcattcggg tatgccgaat gcggattgcg gcaatacggt gatgccgtaa
    14281 ggtttgaata agttgccgaa ttctttgagc ttgccggcat tgccgcttgc caaaacgatt
    14341 ttttccggtt tttcagacat agcggtttcc ctgtgatgaa gatggggcgg cgcgtaggga
    14401 tttgtgccgc aggtagaggg cgagtgcgcc gatttgcccg aacagcgcgc cgaatgcgaa
    14461 aaggaaggac gcgacggcga aggctttgct gccggcggtc agcagataag cacccaagag
    14521 gacgggcagc ataaatgcca gtgtgaacaa ggcaacagac aacagataga tttttcggcg
    14581 gttcatggcg ttcggtcgga aacgggatgt tcggattata gccgattagg acggcattcc
    14641 ctagaggctg gaaaaatgcc gtctgaagcg gcgttcagac ggcatggcgg gcattatgcc
    14701 tgtttgttcc aacgttcgat ggattctttg atgacttttt tcgcttcttc cgcaccgccc
    14761 caggattcga ctttggtcgt acccgctttt ttcaggtctt tgtagtggtt gaagtggaac
    14821 tcgatttgtt tgatgagctg ttgcggcaaa tcggacaaag ttttgtaggc gttgccgtta
    14881 ttgcggtcgt cggcaggtac gcagacgatt ttgtcgtcca cttcgccgtc gtcgacgaat
    14941 ttcatcacgc cgataacgcg cgcttccaag aatacgccgg ttgccagagg ttgttcggta
    15001 acgagcaaca cgtccaattc atcgccgtct tcgtccaaag tttgggggat gaagccgtag
    15061 ttggtcggtt tggcgaagat ggcgggttcg atgcggtcga gttggaatgc ggcgagtttg
    15121 cggttccact cgattttgtg gttgctgccg gcggggattt cgttgacgac gttgatgatg
    15181 ccgccgtcca cgtcgcccgg ggtcaggatt tggttgaagt ctgccatttg gtttccttta
    15241 tttgggaagg tttgaagttt gaaagtatag cacaaacgtc cggctggaaa tgcgtccgat
    15301 gccgtctgaa agggaaaccg ggcgcgtgtt accgtttgcc caaaaacctg cccagttcca
    15361 aaatcgcgcg cctgttggac ggggaaaaca ctttttccgc cgcttcttcc aagccgaacc
    15421 agccgtagga gacgtgttcc tcgggttgca ggacgacggg cgtatcgcgc gggatttcgg
    15481 cccggaagac gtgttcgcgg ttttcaaaca cgcctttggg gtagcggtgc cgccagtggt
    15541 ggtagatttc gtaaaccgtg ctgtcgtgcc ggtcttggag ctgcccgtcc tccagcagga
    15601 tgccggtttc ttcccaaact tcgcgccttg ccgtttgggc gacggtttcg cccggttcga
    15661 ggctgccggt taccgactgc caaaatcctt tcggatgcgt gcgttcgatg agcaggatgc
    15721 cgccgtcccc gctataaagg acgaccagtg cggaaacggg gtatttgagc ggttttgcca
    15781 tcggcatctt tcggcgggct gcggtaatga aggggcggat tatagcaaac gccgcacgtt
    15841 atggcgttta tccttttccg tatccttttt tctgcacgga tgggacgcgc cggtgtttgc
    15901 cggtaaattt tcctttgtgt caaaaagata agggcggttg tgattttaat gcttgccaaa
    15961 gtgacgggcg gaaactataa tccgcgactt accgagtcgg agtgtggcgc agtctggtag
    16021 cgcacttgca tggggtgcaa ggggtcgaag gttcgaatcc tttcactccg accaaaaatt
    16081 ccgaaagccg ctttcaaaag cggctttttt gccgtccgta tgattatgat gtagagtacg
    16141 cggcgacaga cattcaaatg ccgtccgaaa accgttcaga cggcatctct ttatcttaat
    16201 agtggattaa caaaaatcag gacaaggcga cgaagccgca gacagtacaa atagtacggc
    16261 aaggcgaggc aacgccgtac tggtttaaat ttaatccact atagtttcat tccgtaccat
    16321 cttaaggaac atcaaattgg gcatttcccg caaaatatcc cttattctgt ccatactggc
    16381 agtgtgcctg ccgatgcatg cacacgcctc agatttggca aacgatccct ttatccggca
    16441 ggttctcgac cgtcagcatt tcgaacccga cgggaaatac cacctattcg gcagcagggg
    16501 ggagcttgcc gagcgcagcg gccatatcgg attgggaaac atacaaagcc atcagttggg
    16561 caacctgatg attcaacagg cggccattaa aggaaatatc ggctacattg tccgcttttc
    16621 cgatcacggg cacgaagtcc attccccctt cgacaaccat gcctcacatt ccgattctga
    16681 cgaagccggt agtcccgttg acggattcag cctttaccgc atccattggg acggatacga
    16741 acaccatccc gccgacggct atgacgggcc acagggcggc ggctatcccg ctcccaaagg
    16801 cgcgagggat atatacagct acgacataaa aggcgttgcc caaaatatcc gcctcaacct
    16861 gaccgacaac cgcagcaccg gacaacggct tgccgaccgt ttccacaatg ccggcgctat
    16921 gctgacgcaa ggagtaggcg acggattcaa acgcgccacc cgatacagcc ccgagctgga
    16981 cagatcgggc aatgccgccg aagctttcaa cggcactgca gatatcgtca aaaacatcat
    17041 cggcgcggca ggagaaattg tcggcgcagg cgatgccgtg cagggtataa gcgaaggctc
    17101 aaacattgct gtcatgcacg gcttgggtct gctttccacc gaaaacaaga tggcgcgcat
    17161 caacgatttg gcagatatgg cgcaactcaa agactatgcc gcagcagcca tccgcgattg
    17221 ggcagtccaa aatcccaatg ccgcacaagg catagaagcc gtcagcaata tctttacggc
    17281 agtcatcccc gtcaaaggga ttggagctgt ccggggaaaa tacggcttgg gcggcatcac
    17341 ggcacatcct gtcaagcggt cgcagatggg cgcgatcgca ttgccgaaag ggaaatccgc
    17401 cgtcagcgac aattttgccg atgcggcata cgccaaatac ccgtcccctt accattcccg
    17461 aaatatccgt tcaaacttgg agcagcgtta cggcaaagaa aacatcacct cctcaaccgt
    17521 gccgccgtca aacggcaaaa atgtcaaact ggcagaccaa cgccacccga agacaggcgt
    17581 accgtttgac ggtaaagggt ttccgaattt tgagaagcac gtgaaatatg atacgaagct
    17641 cgatattcaa gaattatcgg ggggcggtat acctaaggct aagcctgtgt ttgatgcgaa
    17701 accgagatgg gaggttgata ggaagcttaa taaattgaca actcgtgagc aggtggagaa
    17761 aaatgttcag gaaacgagaa gaaggagtca gagtagtcag tttaaagccc atgcgcaacg
    17821 agaatgggaa aataaaacag ggttagattt taatcatttt ataggtggtg atatcaataa
    17881 gaaaggcaca gtaacaggag ggcatagtct aacccgtggt gatgtacggg tgatacaaca
    17941 aacctcggca cctgataaac atggggttta tcaagcgaca gtggaaatta aaaagcctga
    18001 tggaagttgg gaggtgaaaa cgaaaaaagg tgggaaagtg atgaccaagc acaccatgtt
    18061 cccaaaagat tgggatgagg ctagaattag ggctgaagtt acttcggctt gggaaagtag
    18121 aataatgctt aaggataata aatggcaggg tacaagtaaa tcgggtatta aaatagaagg
    18181 atttaccgaa cctaatagaa cagcatatcc catttatgaa tagtaatatt tatgaaaaat
    18241 taggagatta atgatgaaaa gaattaagtg cttttgtgat aaatttccat caggagatac
    18301 atttagaatg tgtatcat
//
LOCUS       DAXFZM010000045        17717 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.045, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000045 DAXFZM010000000
VERSION     DAXFZM010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 17717)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17717)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17717
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.045"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            99..1496
                     /gene="aspA"
                     /locus_tag="ACFJAG_001233"
     CDS             99..1496
                     /gene="aspA"
                     /locus_tag="ACFJAG_001233"
                     /EC_number="4.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008797 - aspartate ammonia-lyase activity
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HFC3980513.1"
                     /translation="MTVRIEHDLLGDREIPAEVYWGIHTLRAIENFKISTQKISDVPQ
                     FVRSMVMVKKATAQANGELGAVKPEIAAAIEKACDEVLLNNRCLDQFPSDVYQGGAGT
                     SVNMNTNEVIANLALEALGYEKGRYDIVNPMDHVNASQSTNDAYPTGFRLAVYYSIGE
                     LLDKLTVLKNAFAAKAEAFKDVLKMGRTQLQDAVPMTAGQEFQSFQVLLEEEILNLDR
                     TRQLLLEVNLGATAIGTGVNTPKGYAELVVKKLSEVSGLPCKLTENLIEATSDCGAYV
                     MVHGALKRTAVKLSKICNDLRLLSSGPRAGLKEINLPELQAGSSIMPAKVNPVIPEVV
                     NQVCFKVIGNDTTITFAAESGQLQLNVMEPVIAQCMFETISLLGNAAVNLSDKCVKGI
                     TVNREICERYVFNSIGLVTYLNPYIGHRNGDLVGKICAQTGKGVREVVLERGLLSEEE
                     LNRILSPENLMNPHL"
     gene            complement(1564..3054)
                     /locus_tag="ACFJAG_001234"
     CDS             complement(1564..3054)
                     /locus_tag="ACFJAG_001234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="surface lipoprotein assembly modifier"
                     /protein_id="HFC3980514.1"
                     /translation="MNKPLSLALFCLLLPITAHADNPADERRRLLDEGSRQTQQYRES
                     GWLDTEQARGEVEENDGYISIGGEIYQVGDTAEELESAIYHALNARQWHKVRQFAARY
                     AKLPRHKPALIHLADALQKRDEGDFRAAGNSFQTALEAEPDNPRLLLEAGRFYAEDNQ
                     NKESAAAFEKVLKTDIPAETRPIVENYLSELGKRRRWHGQISLGYGYNSNVNQGNGIN
                     QCVWEIAGMCLMERTLPAPTDSTFSSYSATAEKTVPLKGHHGVQVRGVLYGNRYTEKD
                     KDSAAMPDYGYRNGSLYAGYAYADARSSFSLLPYFEYDFRNRHTHYRAWGADADWSRT
                     LSPHWRINSHAGAKKTGYGGQSKTYFADFKQYELGAGAEFSITPKSGLLVNFDAARKA
                     YPEKSSSSKEYTARLGAYRLFSGGTYLNAVLLYRRSLYDAASFVSDNKRRSDKQYIMM
                     AAAGFPQWNIKGVYPELRFRRTIAHSNAVYYRYRQNEWLLGFKYRF"
     gene            complement(3325..4308)
                     /locus_tag="ACFJAG_001235"
     CDS             complement(3325..4308)
                     /locus_tag="ACFJAG_001235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Slam-dependent surface lipoprotein"
                     /protein_id="HFC3980515.1"
                     /translation="MSIRNKTLLAVLLCGVFGVAAAAPAGGSSQRKSQDPNSDPTTVR
                     PGTSDKQPFGAGKAGLAFSINNGGSWSKSINLDDGPVKYIRAKYQAPINGNDPYANVD
                     GTRNLQYLRLGDVKPVIGWFYNPTLGQVWYENHHNNTEVYSVRQIANPAIPAAPKFGG
                     LVIAKVPGMGGSNGNVFFGEWAPRAGNPQQISTDLNMADGKRTVWYVGDNPTGNTTGV
                     RTATYNVLGINKHTPGQNDFYTGQVTATFGSGITGTMAGRISRSSDHVDFDHAKIDNR
                     NGTFADPSQGMTGRFYGNQAAAMAGYTTRGTGNVGDDVAFGGSATDIETRK"
     gene            complement(4523..7951)
                     /locus_tag="ACFJAG_001236"
     CDS             complement(4523..7951)
                     /locus_tag="ACFJAG_001236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HFC3980516.1"
                     /translation="MMSGFSPKPKTIILSLAGAFGALAFADTPNNTEQQKELNTIVVH
                     GKRSADQKGADDVYYKNVSNAYVGKEYLERYRVQSAGDVLKGLNGVYNMNTRTAGGAI
                     TPNIRGITGKGRIPVTIDGTEQTIDVWMNNYGVGDRNYLDPALFRSIAVEKSPALTRG
                     VKSGVGGAMSIRTIEAGDIVPEGQKFGFQLKTEFANNRTRPANNLNQWLGWEDYRTLP
                     LGATADGAGGGSDPITGQQSPQALVVDNFTPPQHKSGRDNWRFGGDRSYMAAAAFKTE
                     LSDGLAAYSYRNKGNYFAGRKGAEGYLNNPVYDLQKCYDEGGSDFNCKNSATFIPNMA
                     RIYYPGVEVLNSNTETKTLLLKNNWHLPGSHRLGWQYMRTDVRFGEINPFHTTYVMNM
                     EEHNETNRPKELSPQAQSIDSTIRTDTYKLGWAWKPENSRWVDLQANLWRIKTNSTRH
                     QSGGMDLSSARPDPFYDVWYWCTQRGRIPPEHVDNYSSCNDLMNDFGVNGLTKEQVLA
                     MTPNDNGQFRVISGAEQKTRVSRTGFDISNRFRLRDRLSMTLAADYQKEKLAEEVEIV
                     NSQDLFNLAGMVTGLTKLAGPRGGERREWGTNLVFDWQAADRLKISAGIRYHNFRGFD
                     TALAEGRARRDPRYQAGDGTQHYADGAYLPYFELAGDQERRDWNVVAEQLRQAYQSGD
                     AAAIAAAVQAEQAHGARYHLLKYYDGSYRTDGYVYIGNDGRAYFDGRFGGVNEAQNQP
                     LYRVRPVYVPFVNGKLDSGALPQHFHDFVSNYQEKVTNPQGLHGTHYRYWAGVGNPID
                     CIRSDAASCLAHNLSGKVTNFQVGYPEYGDDTGLGLKIIGRHYTEEQYWAQPKPIRAH
                     AWAPTIAVSYDLTDNSRLFVRYAQMSRFPSVYEVGSFYNDVAYAGMPKAPNFRFKPER
                     SRSWEIGYSFNFAPYWSRLRAGDMRLTYYRNRIQNVIETTDYFRTVQYDRKDTAGLEW
                     QSRIDTGRFFAALGATYRLKQQMCDRDTAFDYDPYGAKGVPICIEGGYGSTRGYQALQ
                     PKYSINLDAGVRLLGEKLELGLRGIYHSRVNTKQYDQLLQKDLGIIFDTTGKPHHWRS
                     SLTWDVYGRYRLHKNLNVNLGITNLTNRYYLDPMSNVAAPGPGRTVTFGLTAKF"
     gene            complement(8159..9034)
                     /locus_tag="ACFJAG_001237"
     CDS             complement(8159..9034)
                     /locus_tag="ACFJAG_001237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA/RhaT family transporter"
                     /protein_id="HFC3980517.1"
                     /translation="MAYLLISIVFSVSVSILLKMARKKKIDIAQAVAVNYVVAVILTL
                     SVLKPDVGNIGAFLPTWPLFAALGVLLPSVFVIMGKSVESAGIVKSDAAQRLSLFLPI
                     VAALTLFGEKLSEGKLIGLCLAFAALFCLLWKSDSGKKSGSAWRQALLLLGVWAGYGI
                     IDILFKQIAKSGTAFAGNLLVAFALAGVLMFACLFAKSVRWRVESVVGGILLGGLNFM
                     NIVTYITAHQMMKDSPTLVFAGMNIGVIVLGTLSGALFFKEKINTINTAGIVLSLCSI
                     ACLFYWTEVKALFGI"
     gene            complement(9038..9730)
                     /locus_tag="ACFJAG_001238"
     CDS             complement(9038..9730)
                     /locus_tag="ACFJAG_001238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HFC3980518.1"
                     /translation="MDKDLYAVLGVSPQAGADEIKRAYRKLAMKYHPDRNPGNPQAEE
                     KFKEIQRAYDTLSDLSKRTQYDASFRRHEERGRQEEAFRREQARREQFYGEQMRREQA
                     FRREFERQASRSRHAYEPSGSGSGRNYILAAYILFGLGAIMQFMPIVGVILAYMKRNS
                     LDSIVYAAHTEYLIKTFWRTFWLYLLGALTARFGIGVLIIIATTVWYFYRIIAGFIRF
                     NDGRAVAPEKWI"
     gene            complement(9752..10231)
                     /gene="ybaK"
                     /locus_tag="ACFJAG_001239"
     CDS             complement(9752..10231)
                     /gene="ybaK"
                     /locus_tag="ACFJAG_001239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0002161 - aminoacyl-tRNA editing activity
                     [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Cys-tRNA(Pro) deacylase"
                     /protein_id="HFC3980519.1"
                     /translation="MSKHTYPITPAVRVLHENGIEFEPFTYAYEEHGGTAQFARLFGK
                     DEHLVIKTIVLQDENGKGPIVLMHGDKQISTRNLARHLGAKHIEPAAPAQANKWTGYL
                     VGGTTPFGIRTKLDIYVEQSVMDLETIYINGGKRGFIIGIRPDDLNILNPKTIQAAV"
     gene            10306..10668
                     /locus_tag="ACFJAG_001240"
     CDS             10306..10668
                     /locus_tag="ACFJAG_001240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HFC3980520.1"
                     /translation="MDIRYFGTTPRYSEAVCAGGLIFLSGMVPENGETAAEQTADVLA
                     QTDRWLAECGSDKAHVLDAVIYLRDMGDYAEMNGVWDAWVAAGRTPARACVEARLARP
                     EWRVEIKITAVKRDAATA"
     gene            10702..11565
                     /locus_tag="ACFJAG_001241"
     CDS             10702..11565
                     /locus_tag="ACFJAG_001241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="folate-binding protein YgfZ"
                     /protein_id="HFC3980521.1"
                     /translation="MKTLLPFFGVARVSGEDRQTFLHGQLSNDINNLQAGQACYATYN
                     TPKGRVIANMIVVNRGDDLLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAVGAEL
                     AASAEPLAAQEPSLAFTSECVSDGICSVILHHRGILHIAPETALPPYDAAAENAWRLH
                     EIRSGYPWICAATKETAVAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAV
                     LSGNSAAEAGILLTADGEEAGIVLDSVQDSENFTALAVIKFSAAQKELTVPNGGIFKA
                     VHLFFKTKNAE"
     gene            11657..12616
                     /gene="ttcA"
                     /locus_tag="ACFJAG_001242"
     CDS             11657..12616
                     /gene="ttcA"
                     /locus_tag="ACFJAG_001242"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiocytidine(32) synthetase TtcA"
                     /protein_id="HFC3980522.1"
                     /translation="MSKKTKQELENNKLSKRLRHAVGDTINDFNMIEPGDKIMVCLSG
                     GKDSYALLDILRRLQASAPIDFELVAVNLDQKQPGFPEEVLPTYLESIGVPYKIVEED
                     TYSTVKRVLDEGKTTCSLCSRLRRGILYRTAKELGCTKIALGHHRDDILATMFLNMFY
                     GGKLKAMPPKLVSDNGEHIVIRPLAYVKEKDLIKYAELKQFPIIPCNLCGSQPNLQRQ
                     VIGDMLRDWDKRFPGRIESMFSALQNVVPSHLADTELFDFAGLERGQNLKHGGDLAFD
                     SEKMPERFSDGSEEDESEIKIEPQKAERKVINILANKPKTCGA"
     gene            complement(12710..15649)
                     /locus_tag="ACFJAG_001243"
     CDS             complement(12710..15649)
                     /locus_tag="ACFJAG_001243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type III restriction-modification system
                     endonuclease"
                     /protein_id="HFC3980523.1"
                     /translation="MSGFNYEKNQPHQMRAVSAVLGVFDGATPKYRTADENPELLFAA
                     KQYANNILKVQSQNGIDGRFPDRSDDQNILDISMETGTGKTYTYTQTMFELHRWLGVF
                     KFIVVVPTLSIKAGTQQFLQSKALAEHFEQDFGGDYEGVRLKTYVVESAKKNKGKKSN
                     APITIEQFVKAENKKEIHVLLINAGMVNSSSMNDTGDKALKDLFDNPVDALAAVRPFM
                     IVDEPHKFPTRDSAKTWGNIKRLKPQYILRYGATFNDEYYNLLYRLTAVDAFNDGLVK
                     GVRVFQEEMQGGMDAAVKLVSSDGKEAKFELNEKDKKQTFKLAKGEDLAQIHPAISDL
                     KIDKMNKTVVVLSNGLELKTGAVINPYSYSQTVQDAMMQRAVAEHFKLERALLAERAP
                     QPKIKPLTLFFIDDIAGYRSGNELSGSLKDKFESWIRAEAARRLKTESDPFYRDYLQK
                     TLDDVSACHGGYFSKDNTDSDDRIEQEINEILHDKEKLLSLDNPRRFIFSKWTLREGW
                     DNPNVFQICKLRSSGSTTSKLQEVGRGLRLPVNELMARVRDVPYKLNYFVDSSEKDFV
                     KQLVGEINDNSFQEEISKKFTEELKQKILQKYPDIKPLVLVNQLFSDGIIDDNENFAE
                     DGYDKLKAAYPEAFPKGLDKGKVSNAKDEGKDTIIMREGKYEELKALWELIHHKAVLQ
                     YKIKDEAEFVDLFTAYLRENAAKFPQAGICTAVNEAYINNGLMLSRRIDSIEDEDFIR
                     FNTMTYREFLEKLAQTAKIQMQTLHQAFYRVRDELNIGDFLNMQTIAQIKNGFNRFLL
                     HHSFHKFELDYRLVGSKIHPTKFTNKDGKPRAVKKADLGRFEDTEHRPAAGYLFGEIF
                     YDSDIEHENVANNQIEGVIVFTKIPRNSIKIPVAGGGTYSPDFAYIVKTKSGEILNFV
                     IEAKGTDGAEDLRKSEERKIKHAEKLFAEISKEIKVVFKTQFDGERIAELIGQNMPAG
                     GHSENEH"
     gene            complement(15739..>17717)
                     /locus_tag="ACFJAG_001244"
     CDS             complement(15739..>17717)
                     /locus_tag="ACFJAG_001244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HFC3980524.1"
                     /translation="TAGANTEAIYTSDGITANSTQLEQLKKLFPACFDADGNFLIDRL
                     QAEIAPQTDIGREFYEMNWLGKSYARLLRNLPPETLISEDKTHNAKPENAGSQNLLIR
                     GDNLEVLKHLKNAYANSVKMIYIDPPYNTGSDGFVYQDDRKFTPAELALLANIDEDEA
                     ARILDFTDKGSNSHSAWLTFMYPRLYIARELLKDDGVIFISIDDNEAAQLKLLCDEVF
                     GEGNFVAQLPWRKRTAKSDVPFGISQDYEWIFVFAKSCQFIAATKGKERRYYETDDFP
                     DRPWRTHDLTKQTTAAERPNSFFTMVDPKTGKKYPANPNATWRVTKDTFQDYYNKGKI
                     VFPDDYDFLNISNPVMRYFKDDDMKKAGEDFGKVAVSSRLPENVGTLADAVAEYLAIF
                     SRTLPENIGMTKEGTKEITDLFGSKIFTFPKPSQLIKFLVSISSKSNDLILDFFAGSG
                     TTAHAVMQLNAEGQNGNRRYICVQLPEKTAEKSEARKAGYPTIFDITKARIEKAAAKI
                     RVEHPDYTGDSGFKIFQTADNFRQHPDKDFSPEQPDLPLNDELSEEQLQTLLTTWTLY
                     DGAALTTPVEPVRLGSYTAYLCEKRLYLLNKGFTSADLLAFIKKLDDDADFNPNRVIV
                     FGSNMASAMQHELDQAVRGYTNKKEIELNVIIRV"
BASE COUNT         3908 a         4707 c         4637 g         4465 t
ORIGIN      
        1 acaatttcat ccggccggta tagtgttcgt cctgctgcgg catctttccg atggcgcatt
       61 ttttcaatat taattatccg acttacaaag gtaaaaacat gactgtccgt atcgaacacg
      121 atttattggg cgaccgcgag attcccgccg aagtgtattg gggcatccac accctgcgcg
      181 ccattgaaaa ctttaaaatc tccacacaaa aaatttccga cgtgccgcag tttgtccgca
      241 gtatggtgat ggtgaaaaaa gcaaccgcgc aggcaaacgg cgaattgggt gcagtaaaac
      301 ccgaaatcgc cgccgccatt gaaaaggctt gcgacgaagt tctgctgaac aaccgctgcc
      361 tcgaccaatt cccgtccgac gtgtatcagg gcggggcggg aacttcggtc aatatgaaca
      421 ccaacgaagt catcgccaac cttgcattgg aagccttggg ctatgagaaa ggccgctacg
      481 acatcgtcaa tccgatggat cacgtcaacg ccagccaatc caccaacgat gcctatccca
      541 cgggcttccg ccttgccgtg tattacagca tcggcgaatt gctcgacaaa ctgaccgtat
      601 tgaaaaacgc ctttgccgcc aaagccgaag cgtttaaaga cgttttgaaa atgggtcgca
      661 cccagcttca agatgccgta ccgatgacgg caggccagga attccaatct ttccaagtat
      721 tgttggaaga ggaaatcctc aaccttgacc gcacccgcca actgctcttg gaagtcaatt
      781 tgggcgcaac ggcaatcggc acgggcgtga acacgcccaa aggctatgcc gaactggtgg
      841 tcaaaaaact ctccgaagtc agcggcttgc cttgcaaact gactgaaaac ctgatcgaag
      901 cgacctccga ctgcggtgca tatgtgatgg tacacggcgc attgaaacgc acggccgtca
      961 aactctctaa aatctgcaac gatttgcgcc ttctctcttc cggtccgcgc gccggtttga
     1021 aagaaatcaa cctgcccgaa ttgcaggccg gttcttccat catgcctgcc aaagtcaatc
     1081 ccgtgattcc cgaagtcgtc aaccaagtct gcttcaaagt catcggcaac gatacgacga
     1141 ttaccttcgc cgccgaatcc gggcaactgc aattaaacgt tatggagccg gtcatcgccc
     1201 aatgtatgtt tgaaaccatt tccctcttgg gcaatgccgc agtcaaccta tccgacaaat
     1261 gcgtcaaagg cattacggtc aaccgcgaaa tctgcgaacg ttacgttttc aactccatcg
     1321 ggctggtgac ttatctgaat ccgtacatcg gccaccgcaa cggcgacttg gtcggcaaaa
     1381 tctgcgccca aaccggcaaa ggcgtgcgcg aagtcgtact ggaacgcggg ttgttgagcg
     1441 aagaagaact caaccgcatc ctctcccccg agaacctgat gaatcctcat ctgtaaacat
     1501 tacggacaaa tgccgtctga aaggaagcgc cctttcagac ggcatttttt atcacccgac
     1561 tggtcaaaac cgatatttaa aacccaacag ccattcgttt tggcggtagc ggtaatacac
     1621 cgcgttgctg tgtgcgattg ttcgcctgaa acgcagttcg ggatatacgc ctttgatatt
     1681 ccattgcgga aaacccgccg cagccatcat gatgtattgc ttgtcgctcc gccgtttgtt
     1741 atcgctgacg aaacttgccg cgtcatacag gctgcggcgg tagagcagga cggcgtttaa
     1801 ataagtaccg cccgaaaaaa gcctatacgc gcccagccga gccgtatatt ctttgctgga
     1861 agaggatttt tcgggatagg ctttgcgtgc ggcatcgaaa tttacaagca ggccgctttt
     1921 cggcgtgatg gaaaattccg cccccgcgcc gagttcgtat tgtttgaaat cggcaaaata
     1981 agttttgctt tgtccgccgt atccggtctt ttttgctccg gcatgtgagt taatgcgcca
     2041 gtgcggggag agtgtgcgcg accagtcggc atccgcaccc catgcgcggt agtgggtgtg
     2101 gcggttgcgg aagtcgtatt cgaaataagg cagcagggaa aaggaggagc gtgcgtcggc
     2161 ataggcgtat cccgcgtaca gcgaaccgtt gcgatagccg taatccggca tggccgccga
     2221 atctttgtct ttttccgtgt agcggttgcc gtacagtaca ccgcgcacct gtacgccgtg
     2281 atgccctttg agcgggacgg ttttttcggc ggtcgcgcta taggatgaga aggtcgaatc
     2341 cgttggcgcg ggcagggtgc gctccatcag gcacatgccc gcaatttccc acacgcattg
     2401 gttgatgccg ttgccttggt ttacattgct gttatagccg tagccgaggc tgatttggcc
     2461 gtgccagcgg cggcgtttgc ccagttcgga caggtagttt tccacgatgg ggcgggtttc
     2521 tgcgggaatg tccgttttca gaactttctc aaacgcggcg gcagactctt tgttttggtt
     2581 gtcttcggca taaaaccgcc ccgcttcgag cagcaggcgc gggttgtcgg gttcggcttc
     2641 caaggccgtc tgaaaactgt tccccgccgc gcggaaatcc ccttcgtccc gtttttgcag
     2701 cgcatcggcc aaatgaatca gcgcgggctt gtgccggggc agtttggcgt agcgggcggc
     2761 gaactgccgc accttgtgcc actgccgcgc attgagggcg tggtaaattg cgctttccag
     2821 ttcttccgcc gtatcgccga cttggtagat ttcgccgcct atcgaaatat agccgtcgtt
     2881 ttcctctact tccccgcgtg cctgttccgt gtccagccaa ccgctttcgc ggtattgctg
     2941 cgtttggcgg ctgccctcgt ccagcaggcg gcggcgttcg tcggcggggt tgtcggcgtg
     3001 ggcggtgatg ggcagaagca ggcagaagag ggcgaggctg agtggtttgt tcatggttgc
     3061 cttccgaaaa gataaagtaa cgcaggtttt aattgctgtc ccaaaatgtc cgataggccg
     3121 aaaccgtatg ggataggcga tgtttattta caaatatcaa atttcaggta gcctgtgttg
     3181 aacacgggct acctgaaacc gagcagcaat ccgtatcgga cggatgattt atatggcttg
     3241 gcagtcggca taaaacggca gcttgaaact cctcaggggt taaatcgagc ctagccgttg
     3301 ccaaaccaaa tcggatggca gctgttattt gcgggtctca atatcggtgg cgctaccgcc
     3361 gaaagctacg tcatcgccga cattaccggt accacgtgtg gtatagccgg ccatggctgc
     3421 cgcctggttg ccgtagaagc ggccggtcat gccttgactg ggatcggcaa aggtaccatt
     3481 tctgttatcg attttggcgt gatcaaaatc gacgtgatcg gaactgcggc tgattctgcc
     3541 tgccatcgtc ccggttatac cagaaccgaa ggtggcggtt acctgaccgg tatagaaatc
     3601 gttctgcccc ggggtgtgct tattgatacc cagcacattg taggtggcgg ttctcacacc
     3661 ggtggtgttg ccggtgggat tatcgcccac ataccaaacg gtgcgtttac catccgccat
     3721 attcaggtcg gtgctgattt gctgcgggtt accggcacgc ggcgcccatt cgccgaagaa
     3781 gacgttgccg ttgctgccgc ccatgcccgg cactttggcg attaccaggc cgccgaactt
     3841 gggtgcggcg gggattgccg ggttggctat ctggcgcaca ctgtacactt cagtgttgtt
     3901 gtggtggttt tcataccaca cctgacccaa cgttgggttg tagaaccagc cgataaccgg
     3961 tttcacatcg cctaagcgca gatattgcag attgcgcgta ccatcaacat tagcataggg
     4021 atcgttgccg ttaatcggtg cctgatattt cgcacggata tatttgaccg gaccatcatc
     4081 cagattgatg gatttcgacc aacttccacc gttattgata ctgaatgcca aaccggcctt
     4141 accggcaccg aaaggttgct tgtcagaggt gccggggcga actgtcgtcg ggtcactatt
     4201 tggatcttgg cttttccttt ggctggaacc accagccgga gcagccgcag ccacaccaaa
     4261 aacgccgcac agcaagacgg ccaacagggt tttattacgt atagacataa tcgtttcctt
     4321 aattaagagt taaacaaaag ccaccgtttt attaccgccg aaccggcgga aaaaacggta
     4381 aaaaccatta cctcggataa gcggggccgg ttgggtttgt gcgtccggag tgttcaattg
     4441 tttgttgtta tatccaatcc gttttcaggt agccttcccg ccatacccgc aggctacctg
     4501 aaaaccccac tccgccctgc ggctagaact tggcagtcag cccaaaggta accgtccggc
     4561 ccggcccggg ggcggcaacg ttggacatcg ggtcgagata gtagcggttg gtcaggttgg
     4621 tgatgccgag gttgacgttg aggtttttgt gcagccggta gcggccataa acatcccaag
     4681 tcagcgatga ccgccaatgg tggggcttgc cggtggtatc gaagatgatg cccaaatcct
     4741 tttgcagcag ttggtcgtat tgcttggtgt tgacccggct gtggtagatg ccgcgcaggc
     4801 cgagctccag tttctcgccc aacaggcgca ccccggcatc caggtttatt gaatatttcg
     4861 gctgcaaggc ctgatagccg cgcgtactgc cgtagccgcc ttcgatgcag atcggcacgc
     4921 ctttggcacc ataagggtcg taatcgaaag cggtatcgcg gtcacacatc tgctgtttca
     4981 ggcggtaggt ggcaccgagc gcggcaaaga agcggccggt gtcgatgcgg ctctgccatt
     5041 ccagcccggc ggtgtccttg cggtcgtatt gcacggtgcg gaaataatct gtggtttcga
     5101 tcacattttg gatacggttg cggtagtagg tcaggcgcat atcgccggca cgcagccggc
     5161 tccaatacgg ggcaaaattg aagctgtagc cgatttccca gctgcggctg cgttccggct
     5221 tgaagcggaa atttggggcc ttcggcatac cggcataggc cacgtcgtta taaaaactgc
     5281 ccacctcata cacgctgggg aagcggctca tctgcgcata gcgtacgaac aggcggctgt
     5341 tgtcggtcag atcgtagctg acggcgatgg tcggcgccca ggcatgggca cggatcggtt
     5401 tgggctgcgc ccaatactgt tcctcggtat agtgccgacc gatgattttg agaccgagac
     5461 cggtatcatc accgtactcg ggatagccga cttgaaaatt ggttactttt cccgataggt
     5521 tatgagcaag gcaagaggcc gcatcacttc ttatacagtc gataggattc cccacgcctg
     5581 cccaatatcg ataatgcgtc ccgtgcagcc cctgcggatt ggtcactttt tcctgataat
     5641 tgctgacgaa atcatgaaaa tgctggggca atgcgccgct gtccagcttg ccgttgacaa
     5701 acggcacata aacggggcgc acccgataga gcggttggtt ctgtgcctcg ttaaccccgc
     5761 cgaaccgtcc gtcaaaatag gcacggccat cgttgccgat atacacataa ccatcggtac
     5821 gatacgagcc gtcatagtat ttcagcaaat ggtaacgggc gccgtgcgcc tgttctgcct
     5881 gtactgccgc ggcaatggcg gcagcatcgc ctgactgata cgcctgccga agctgttcgg
     5941 ccaccacatt ccagtcacgc cgctcctgat cgcctgccag ttcgaaatac ggcagatagg
     6001 caccatcggc ataatgctgg gttccatcgc ctgcctgata gcgcgggtcg cggcgggcac
     6061 gcccttcggc cagggcggta tcgaagcccc ggaagttgtg gtagcggatg ccggcggaga
     6121 ttttcaggcg gtcggcggcc tgccagtcga acaccaaatt ggtgccccat tcgcgccgct
     6181 cgccgcccct gggcccggcc agcttggtca ggccggttac catgccggcc aggttgaaca
     6241 ggtcttgcga attgacgatt tccacttcct ccgccagttt ctctttctga taatcggcgg
     6301 ccaaggtcat gctcaggcgg tctctgaggc ggaagcggtt gctgatatcg aaaccggtgc
     6361 ggctgacgcg ggttttctgc tcggcgccgg aaatcacgcg gaattggccg ttgtcgttcg
     6421 gggtcatggc caacacctgt tctttggtca ggccgttgac gccgaaatca ttcatcaggt
     6481 cgttgcagct gctgtagttg tcgacgtgct cgggcggtat ccggccgcgt tgggtacacc
     6541 aataccaaac gtcgtagaag ggatcggggc gggcggaaga caaatccatg ccgccactct
     6601 ggtggcgggt gctgttggtt ttgatgcgcc acaggttggc ctgcagatcg acccagcggc
     6661 tgttttccgg cttccaggcc cagccgagtt tgtaggtgtc ggtgcggatg gtggaatcga
     6721 tgctctgcgc ctgtggcgac agttctttgg ggcggttggt ctcgttgtgc tcttccatat
     6781 tcatcacata ggtggtgtgg aaggggttga tctctccgaa gcgcacgtcg gtgcgcatat
     6841 attgccagcc gagccgatgg ctgccgggca ggtgccagtt gtttttcagc agcagggttt
     6901 tggtttcggt gttgctgttg agcacttcca ccccggggta gtagatgcgc gccatattgg
     6961 ggatgaaggt ggcggaattt ttgcagttga aatcgctgcc gccttcgtcg tagcattttt
     7021 gcaggtcgta taccggatta ttcaggtagc cttccgcacc cttgcgaccg gcgaagtagt
     7081 tgcctttgtt gcggtagctg taggcggcaa ggccgtctga aagttcggtt ttgaaggcgg
     7141 cggcggccat ataactgcgg tcgccgccga agcgccagtt gtcgcggccg cttttgtgct
     7201 gcggcggggt aaagttgtct accaccaacg cctgcgggct ctgctgtccg gtgatcgggt
     7261 cagaaccgcc gcccgcgccg tcggcggtgg cgccgagcgg cagggtgcgg tagtcttccc
     7321 agcccagcca ttggttgagg ttgttggccg ggcgggttct gttgttggca aactcggttt
     7381 tcagctggaa gccgaatttc tgcccttcgg gcacgatgtc gccggcttcg atggtgcgga
     7441 tggacatcgc gccgccgacg cccgatttca cgccgcgcgt gagggcgggg cttttttcca
     7501 ccgcgatgct gcggaacagg gcggggtcga ggtagttgcg gtcgcccacg ccgtagttgt
     7561 tcatccatac gtcgatggtt tgttcggtgc cgtctatggt aaccgggatg cggcccttgc
     7621 cggtgatacc gcgtatgttg ggcgtgatgg cgccgccggc ggtgcgggtg ttcatgttgt
     7681 acacgccgtt taggcctttg agtacgtcgc cggcggattg gacgcggtag cgttcgaggt
     7741 attctttgcc gacgtaggcg ttggagacgt ttttgtaata cacgtcgtcc gcgccttttt
     7801 ggtcggcact gcgtttgcca tggacgacta tggtattcag ttctttctgc tgttcggtat
     7861 tgttcggggt gtctgcaaaa gccaatgcgc caaatgcacc tgcaaggctt aggataatgg
     7921 tcttaggttt gggggagaat ccggacatca tgtattcctt attaagaata taaaatgaat
     7981 tttattaaga tacactcata ataagaatta tttgaaattt ttaattattg ttaatattta
     8041 aattataatt aaaaataact attattaatt aaattttgaa tctgcccgta taacaaaatg
     8101 ccgtctgaag cagcattttc ctgtttcaga cggcattttg ttatatcaat cagccggatt
     8161 atatgccgaa cagtgcctta acttctgtcc aatagaacag gcaggcaatg gagcataatg
     8221 acagtacaat gcctgccgta ttgattgtgt tgattttttc cttaaagaac aatgcgcccg
     8281 aaagcgtccc taaaacaatc acaccgatat tcataccggc aaaaaccagc gtgggactgt
     8341 ccttcatcat ttggtgcgca gtgatgtagg ttacgatgtt cataaaattc aaaccgccca
     8401 agagtatgcc gccgaccacg ctctcaacgc gccatctgac cgatttggca aacaggcagg
     8461 caaacatcag cacacccgcc agcgcaaatg caaccagcag gttgcccgca aatgccgtgc
     8521 cgcttttggc aatctgtttg aacaggatgt cgataatgcc gtaacccgcc cacacaccga
     8581 gcagcaataa cgcctgccgc cacgcgctgc ctgatttttt gccgctgtcg cttttccaaa
     8641 gcaggcagaa cagtgcggca aaggcgaggc acagtccgat cagtttgcct tcactgagtt
     8701 tttcgccaaa cagcgtcaaa gcggcaacaa tcggtaaaaa cagcgacaaa cgctgcgccg
     8761 cgtcggattt gacgataccg gcggattcta cggatttgcc cataatgaca aatacggacg
     8821 gcagcagcac gcccaaagcg gcaaacagcg gccacgtcgg caaaaatgca ccgatattgc
     8881 cgacatccgg cttcaatacc gacagggtca gtatgaccgc gaccacataa ttgacggcga
     8941 ccgcctgcgc gatgtcgatt tttttcttcc ttgccatttt cagcaaaatg gaaaccgaca
     9001 cgctgaacac gatgctgatt aacaggtagg ccatgctcta tatccatttc tcgggcgcaa
     9061 ccgccctgcc gtcgttgaag cggataaagc cggcgatgat gcggtagaaa taccagacgg
     9121 tcgttgcaat aataatcagc acgccgatgc cgaaacgggc agtcagcgcg cccaaaagat
     9181 aaagccaaaa tgtgcgccaa aaggttttaa tcaggtattc ggtatgtgcg gcatagacaa
     9241 tgctgtccaa actgttccgt ttcatatagg cgagaatcac gccgactatg ggcatgaact
     9301 gcatgattgc acccaaaccg aacaggatgt aggcggcgag gatatagttg cgcccgcttc
     9361 cgctgccgga cggttcgtaa gcatggcgcg aacgtgaagc ctgccgttca aactcccgtc
     9421 tgaacgcctg ttcgcggcgc atctgttcgc cgtaaaactg ctccctgcgc gcctgttcgc
     9481 ggcggaatgc ctcttcctgc cgcccgcgtt cctcatgccg tctgaaggac gcgtcgtatt
     9541 gcgtccgttt tgacaggtcg gaaagcgtat cgtaagcccg ttggatttct ttgaactttt
     9601 cttccgcctg cggattgccc ggattgcggt cgggatggta tttcatcgcc agcttgcggt
     9661 aggcgcgttt gatttcgtcc gcccccgcct gcggcgacac gcccaatacg gcatacaaat
     9721 ctttgtccat attgctcctt atacttcccg gtcaaaccgc tgcctgtatt gttttcgggt
     9781 tcaaaatatt taaatcatcg gggcggatac cgataatgaa cccgcgtttt ccgccattga
     9841 tatagatggt ttccaaatcc atcaccgact gttcgacgta aatatccaat tttgtccgga
     9901 tgccgaacgg cgttgtgccg ccgaccagat agcccgtcca cttgtttgcc tgcgcaggcg
     9961 cggcgggttc gatgtgtttc gcacccaaat gccgcgccag attgcgggtt gaaatctgtt
    10021 tgtcgccgtg catcaagaca atcggcccct taccgttttc atcttgcaaa acaatggttt
    10081 taatgaccaa gtgttcgtct ttgccgaaca gtcgggcaaa ctgcgccgtg ccgccgtgtt
    10141 cctcataggc ataggtaaaa ggttcaaatt cgatgccgtt ttcatgcaaa acgcgtacgg
    10201 caggtgttat cggataagtg tgtttactca tttttcgtca tgcaaaacat ggaaatcggt
    10261 caagcgcaat gttaccatat atccccttta tcgaaggaaa ccgatatgga tatccggtat
    10321 ttcggcacaa cgccccgcta ttccgaagcg gtttgcgcgg gcggcttgat tttcctctcc
    10381 ggcatggttc ccgaaaacgg tgaaacggct gccgaacaga ctgccgacgt gcttgcccaa
    10441 accgaccgct ggctggcgga atgcggctcg gacaaggcac acgttttgga tgcggtcatc
    10501 tacctgcgtg atatgggcga ctatgcggaa atgaacggcg tgtgggacgc ttgggttgcc
    10561 gccggcagaa cgcccgcccg cgcctgcgtg gaagcgcggc tcgcccgtcc ggagtggcgc
    10621 gtcgaaatca aaataaccgc cgtgaagaga gacgcggcaa ctgcataaac agatttcctt
    10681 atatttcaga gtacgcaaat gatgaaaacc ttactgccct ttttcggcgt ggcgcgcgtc
    10741 agcggcgaag accgccaaac cttcctgcac ggacagcttt ccaacgacat caataatctt
    10801 caggccgggc aggcgtgtta cgcgacttac aacacgccca aaggccgcgt catcgccaat
    10861 atgattgtcg tcaaccgtgg agacgatttg ctgctgatta tggcgcaaga tttgcttgaa
    10921 gcaacggtca aacgcctgcg gatgtttgtg ttgcgcgcca aagccgtttt tgaaatcctt
    10981 gaagattacg ccgtcggcgc ggaattggca gcatccgccg aaccgcttgc cgcgcaagaa
    11041 cccagtctcg cctttacctc cgaatgcgtc tcagacggca tctgttccgt catcctgcac
    11101 catcggggca ttttgcacat cgcccccgaa accgccctac ccccttatga cgctgccgcc
    11161 gaaaacgcgt ggcggctgca cgaaatccgc agcggttatc cgtggatatg cgcggctacc
    11221 aaagaaaccg ccgtcgccca aatgctcaac cagcacatca tcggcggcgt acacttcaaa
    11281 aaaggctgct acccgggaca ggaaatcatc gcgcgcgccc agtatcgggg gcaggtcaaa
    11341 cgcggcttgg cggtattgtc gggaaattcg gcagccgaag cgggcatcct gctgacggcg
    11401 gacggcgaag aagccggcat cgtactcgac agcgttcaag attcggaaaa ctttaccgcc
    11461 cttgccgtga ttaaattctc cgccgcgcaa aaagaactca ccgtcccaaa cggcggtatc
    11521 ttcaaagcgg ttcatctctt ctttaaaacc aaaaatgcag aataagccct ctaatgccgt
    11581 ctgaagccct tcagacggca ttgccgcccc tgttttcggt tacaatgccg catccctaat
    11641 ttttcaaacc accgccatgt ccaaaaaaac caagcaagaa ctcgaaaaca acaaactcag
    11701 caaacgcctg cgccacgccg tcggcgacac gattaacgat ttcaacatga tcgagccggg
    11761 cgacaaaatc atggtctgcc tctccggcgg caaagacagc tacgccctgt tagacatcct
    11821 gcgccggctc caagccagcg cgccgattga ttttgaactg gtcgccgtca atctcgacca
    11881 aaaacagccg ggcttccccg aagaagtatt gccgacctat ctcgaaagca tcggcgttcc
    11941 ctacaaaatc gttgaagaag acacttactc caccgtcaaa cgcgtgttgg acgaaggcaa
    12001 aacgacttgt tcgctgtgca gccgcctgcg gcgcggcatc ctctaccgca ccgcaaaaga
    12061 attgggctgc accaaaatcg ccttgggaca ccaccgtgac gacatcctcg ccaccatgtt
    12121 tttaaatatg ttttacggcg gcaaactcaa agccatgccg cccaagctgg tgagcgacaa
    12181 cggcgaacac atcgtcatcc gcccgctggc gtatgtgaaa gaaaaagact taatcaaata
    12241 cgccgaattg aaacagttcc ccatcatccc gtgcaacctc tgcggctcgc agcccaacct
    12301 acaacgccaa gtaatcggcg atatgctgcg cgattgggac aaacgcttcc ccggccgtat
    12361 cgaatcgatg ttctccgccc tgcaaaacgt cgtcccttcc caccttgccg ataccgaact
    12421 ctttgacttt gccggattgg aacgcggtca aaatctgaaa cacggcggcg atttggcttt
    12481 tgacagcgaa aaaatgcccg aacgcttttc agacggcagc gaagaagatg agagcgaaat
    12541 caaaatcgag ccgcaaaaag ccgaacgcaa agtcatcaac attctggcga acaagccgaa
    12601 aacctgcggc gcgtaaacct ccaccgtcaa aaatgccgtc tgaagcccgt ttggcgtttc
    12661 agacggcatt ttaaaatccc gaagcagacg gcttccaaac atttgtttct cagtgttcgt
    12721 tttcagaatg cccgcctgct ggcatatttt gcccgatcag ttcggctatc ctctcgccgt
    12781 caaactgcgt tttgaacacc accttgattt ctttggaaat ctcggcaaac agcttttcgg
    12841 catgtttgat tttccgctct tcgctttttc gcaaatcttc cgccccgtca gtccctttgg
    12901 cttcaatcac aaagttcaga atctcgccgc ttttggtttt cacgatatag gcaaagtcgg
    12961 gcgaatacgt gccgccgccg gcaacaggga ttttgatgga gtttctcggt attttggtaa
    13021 atacgattac gccttcaatt tggttgttgg cgacattttc atgttctata tccgaatcgt
    13081 agaaaatctc gccgaagaga tagccggcgg caggccggtg ctctgtatct tcaaatctgc
    13141 ccaaatctgc ttttttcacc gcgcgcggtt tgccgtcttt attggtaaat ttggtcggat
    13201 ggattttgct gccgacaagc cggtaatcca gttcgaattt atggaaggaa tgatgaagca
    13261 aaaaccggtt gaagccgttt ttgatttggg cgatggtctg catattcaaa aaatcgccaa
    13321 tgttcagttc gtcgcggacg cggtaaaacg cctgatgcaa agtctgcatc tggatttttg
    13381 ccgtttgtgc cagtttttcc agaaactcac ggtaagtcat tgtgttgaaa cggataaaat
    13441 cttcatcttc aatactgtct atgcggcggg aaagcataag cccgttgttg atataagctt
    13501 cgtttaccgc cgtgcatatg cctgcctgcg ggaatttggc ggcgttttca cgcaaatagg
    13561 cggtaaataa atcgacaaat tcggcttcat ctttgatttt gtactgcaaa acggctttat
    13621 ggtgaatcag ctcccacaag gctttgagtt cttcatattt gccttcgcgc atgatgatgg
    13681 tgtctttgcc ctcgtctttg gcgttgctga ctttgccttt gtccaaacct ttggggaagg
    13741 cttcgggata ggcggctttt aatttgtcat agccgtcttc ggcaaagttt tcattgtcgt
    13801 caatgatgcc gtctgaaaac agttggttta ccaataccag cggtttgata tcggggtatt
    13861 tttgcaatat tttttgtttc agctcttcgg taaacttttt ggagatttct tcctgaaaag
    13921 aattgtcgtt gatttcgccg acaagctgct tcacaaagtc tttttcgctg ctatcgacaa
    13981 aataattcag tttgtacggt acatcgcgca cccgcgccat cagctcgttt accggcaggc
    14041 gcaggccgcg tccgacttct tgcagcttgg aagtcgtgct gccgctggaa cgcagtttgc
    14101 aaatctggaa aacgttggga ttgtcccagc cttcgcgcag cgtccatttg gaaaaaataa
    14161 agcggcgcgg gttgtccaaa gacagcagtt tttccttatc gtgcaggatt tcattgattt
    14221 cctgctcgat tctatcgtcg ctgtctgtat tgtctttgga aaaatagccg ccgtggcagg
    14281 cggatacatc gtccaacgtc ttttgcaggt aatcgcggta aaacgggtcg ctttccgttt
    14341 tcagacggcg tgccgcttcc gcgcgaatcc agctttcaaa tttatctttc aggctgcctg
    14401 aaagctcgtt gccgctgcgg tagcccgcga tatcgtcaat aaaaaacagc gtcagcggct
    14461 tgattttggg ctgtggcgcg cgttctgcca aaagcgcgcg ttccagcttg aaatgttcgg
    14521 caaccgcccg ctgcatcatc gcatcctgca ccgtttgcga ataggaataa gggttgatga
    14581 cggcacccgt tttcaactcc aagccgttgc ttaacaccac cacggtttta ttcattttgt
    14641 cgattttcaa atccgaaata gccggatgga tttgcgccaa atcttcgcct tttgccagtt
    14701 tgaacgtctg ctttttgtcc ttttcgttta attcaaattt cgcttctttg ccgtccgacg
    14761 acaccagttt taccgccgca tccatgccgc cctgcatttc ttcctgaaac acgcgcacgc
    14821 ctttgaccag cccgtcgtta aacgcgtcta ctgccgtcaa acggtaaagc aagttgtaat
    14881 attcatcgtt aaatgttgca ccgtagcgca aaatatattg cggttttaag cgtttgatat
    14941 tgccccacgt tttcgcgcta tctcgggtcg ggaatttatg cggttcgtcc acaatcataa
    15001 acgggcgcac ggcagccaat gcatcaacgg gattgtcaaa caaatccttc aatgccttgt
    15061 cgcccgtatc gttcatggac gacgaattaa ccatgcccgc gttaatcagc agcacatgaa
    15121 tttccttttt gttttccgct ttgacaaatt gctcaatcgt tatgggcgca ttggactttt
    15181 tgcccttatt ctttttcgcg ctttccacca cataggtttt caggcgtacg ccttcataat
    15241 cgccgccgaa atcctgttca aaatgctctg ccaaagcctt gctttgcaaa aactgctgtg
    15301 ttcccgcctt aatggacaaa gtcggcacga ccacgataaa tttgaacacg cccagccaac
    15361 ggtgcagctc gaacatggtt tgtgtgtagg tataggtttt gcccgtgccc gtttccatgg
    15421 aaatatcaag gatattttgg tcgtccgaac ggtcggggaa tcggccgtct ataccgtttt
    15481 ggctttgcac tttcaggata ttgtttgcgt attgttttgc agcaaacaaa agttcgggat
    15541 tttcgtctgc cgtccgatat ttgggcgttg ccccgtcaaa cacgcccaaa accgccgaaa
    15601 ccgcccgcat ttggtgcggc tggtttttct cgtaattaaa accgctcatg aatgtttctc
    15661 catgaagtca ttgttgtatc gtccttcccc cgcaagggga atccaagccg aaaagcagcc
    15721 tgcactttcg gattccggtt acaccctgat aatcacattc aactcaatct cttttttatt
    15781 ggtataaccg cgaaccgcct ggtcgagttc gtgctgcatg gcgcttgcca tattgctgcc
    15841 gaatacaatc acacggttgg gattgaaatc cgcatcgtcg tccagcttct tgataaacgc
    15901 cagcaaatcg gcggaagtaa aacccttgtt aagcagatac agccgttttt cgcacagata
    15961 cgccgtataa ctgcccaacc gcacaggctc aaccggcgtg gtcagtgccg ccccgtcata
    16021 cagcgtccag gtggtcagaa gcgtttgcag ctgttcttcg cttaattcat cgttaagcgg
    16081 caaatccggt tgttcgggcg aaaaatcctt gtctggatgc tgcctgaaat tgtctgccgt
    16141 ttgaaagatt ttgaagcccg aatcgcccgt gtaatcggga tgttcgacgc ggattttggc
    16201 ggcggctttt tctatgcggg ctttggtgat gtcgaagatg gtcgggtagc ctgctttacg
    16261 ggcttcggat ttttcagcgg ttttttcggg aagctgtaca cagatatagc ggcggttacc
    16321 gttttgtcct tcggcgttaa gctgcatcac ggcgtgggcg gttgtgccgc tgcctgcgaa
    16381 gaagtctagg attaggtcat tactctttga acttattgaa actaaaaatt taatcaattg
    16441 actaggcttg gggaaggtaa atattttgct accaaataaa tctgtgattt cttttgtgcc
    16501 ttctttagtc attccgatat tttcaggtag cgtcctacta aaaatagcca aatattcggc
    16561 tactgcatcg gctaatgtac caacattttc aggtaatcta ctgcttacag ctactttgcc
    16621 aaaatcctcg ccagcttttt tcatgtcgtc atctttaaag taacgcataa ctggattgct
    16681 gatatttaag aaatcataat catcagggaa aacgattttt cctttattat aataatcttg
    16741 aaatgtatct ttggttacac gccaagttgc atttggattt gctggatatt tttttcctgt
    16801 cttgggatca accattgtga aaaaactatt tggcctttcc gccgcagttg tttgtttcgt
    16861 taagtcgtgg gtacgccaag gacgatcggg gaaatcatca gtctcataat agcgtcgttc
    16921 cttgccttta gttgctgcaa taaattggca agattttgcg aatacaaata tccattcata
    16981 atcctgcgaa ataccaaaag gcacatctga tttagctgtt ctttttcgcc aaggcaattg
    17041 tgcaacaaaa ttcccttccc caaacacttc atcacacaac aatttcaact gcgccgcttc
    17101 gttatcgtca atcgagataa aaatcacgcc gtcgtccttt aacagttcgc gggcgatata
    17161 caggcgcgga tacataaagg tcagccacgc gctgtgcgag tttgagcctt tgtcggtgaa
    17221 atctaaaatc cgcgcggctt cgtcttcgtc aatattcgcc aggagggcaa gttcggcggg
    17281 tgtgaatttg cggtcgtcct gatagacaaa gccgtccgat ccggtgttgt agggcgggtc
    17341 gatgtaaatc atcttcacgc tgtttgcgta ggcgtttttt aagtgtttca acacttccag
    17401 attatcgccg cgaatcagca gattttggct gcctgcattt tcgggcttgg cgttgtgcgt
    17461 tttgtcttca cttatcaggg tttcgggcgg caggttgcga agcaggcggg catatgattt
    17521 gcccagccag ttcatttcgt aaaattcgcg tccgatgtcg gtctgtggcg caatttcggc
    17581 ttgtaatctg tcgataagga aatttccgtc tgcgtcaaaa caggcgggaa acagtttttt
    17641 gagctgttcg agttgggtag agttggcggt aatgccgtct gaagtgtaga ttgcctcagt
    17701 gttcgccccg gctgtgt
//
LOCUS       DAXFZM010000046        17563 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.046, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000046 DAXFZM010000000
VERSION     DAXFZM010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 17563)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17563)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17563
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.046"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(402..1244)
                     /locus_tag="ACFJAG_001245"
     CDS             complement(402..1244)
                     /locus_tag="ACFJAG_001245"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HFC3980525.1"
                     /translation="MLICNPYEVVIHGTTSSGKIFRPSDWAKRLCGILSSFTKDNRLS
                     YSKWVRPMLVDNIRCVAVDKKLETDNPQMFRFLMDFAADNDLRVIDCKALLEEREQGG
                     QNDPANERVLLAQAIEEKHAAEKTQEQTASGASYVLREIGADDTATAFAALSVLRSAL
                     TDIGRFTEQINKTQRPQGYRLLGIFEEGKHNAVAVCGFREACTLAGGRHIHIDDIVTL
                     PQSRRKGYASRLLEEVRKISAETGVTKIHLNVHVNHDRTDAHRLYFKNGFEICAYHFR
                     CDPK"
     gene            1479..2399
                     /gene="pyrB"
                     /locus_tag="ACFJAG_001246"
     CDS             1479..2399
                     /gene="pyrB"
                     /locus_tag="ACFJAG_001246"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004070 - aspartate carbamoyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase"
                     /protein_id="HFC3980526.1"
                     /translation="MPNPLYRQHIISISDLSREQLECLLQTALKLKAHPRGDLLEGKL
                     IGSCFFEPSTRTRLSFETAVQRLGGKVIGFSDGANTSAKKGETLADTARIISGYTDAI
                     VQRHPKDGAARVAAEFSRVPVINAGDGTNQHPSQTLLDLVTIYETQGRLDKLKIAMAG
                     DLKYGRTVHSLCQALKRWGCEFAFVSPPSLAMPDYITEELEEADCRYRALGSLEEAAE
                     WADILYMTRVQRERFDEQEFAKIQGKFNLEASMLARAKPNLRVLHPLPRTDEIHPDVD
                     AAPHAYYFEQATNGVYARMAILSLVLNEEV"
     gene            2409..2867
                     /gene="pyrI"
                     /locus_tag="ACFJAG_001247"
     CDS             2409..2867
                     /gene="pyrI"
                     /locus_tag="ACFJAG_001247"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009347 - aspartate carbamoyltransferase
                     complex [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase regulatory
                     subunit"
                     /protein_id="HFC3980527.1"
                     /translation="MEAQKLSVEAIEKGTVIDHIPAGRGLTILRQFKLLHYGNAVTVG
                     FNLPSKTQGSKDIIKIKGVCLDDKAADRLALFAPEAVVNTIDNFKVVQKRHLTLPDEI
                     AEVFRCPNPNCAGHGEPVKSRFYVKKHNGQTRLKCHYCEKTYNRDSVAEA"
     gene            2929..3595
                     /locus_tag="ACFJAG_001248"
                     /pseudo
     CDS             2929..3595
                     /locus_tag="ACFJAG_001248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273228.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(4000..5223)
                     /locus_tag="ACFJAG_001249"
     CDS             complement(4000..5223)
                     /locus_tag="ACFJAG_001249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HFC3980528.1"
                     /translation="MQRRIITLLCAAGMAFSTQTLAANLEVRPDAPQRYTVKQGDTLW
                     GISGKYLYSPWQWCRLWGANRDQIHNPDLIYPGQVLVLRYVGGEPRLDLEQTDGIPVV
                     KISPDKEVSGYGIPAIDVNFYRVFMQHPQIVSRKETAAAPRLLSGPEGRLLYTKGARV
                     YTKGLKEPGRYLTYRINKNITDPDTGKFLGQEVAFSGIVRSLDYTDSALEQRSKQAEE
                     RLKDNEYYTRTHPLITPVRTRSIQPLVVETAISEIQQGDYLMKMPEDTDRFNMVPHEP
                     SRPVQAKIVSVFEGVGVGGQFKTITIDKGGDDGLDKGAVLSLYKRKKTMQVNLSNNLT
                     EEPKSRDTVELISTPAEEVGLAMVYHTAPKLAYAIILENISDISEGDTAANPGRDLDN
                     MPDQGRARVDSDPFQ"
     gene            5635..6138
                     /gene="def"
                     /locus_tag="ACFJAG_001250"
     CDS             5635..6138
                     /gene="def"
                     /locus_tag="ACFJAG_001250"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042586 - peptide deformylase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HFC3980529.1"
                     /translation="MALLNILQYPDERLHTVAKPVEQVDERIRKLVADMFETMYESRG
                     IGLAATQVDVHERVVVMDLTEDRSEPRVFINPVIVEKDGETTYEEGCLSVPGIYDAVT
                     RAERVKVEALNEKGEKFTLEADGLLAICVQHELDHLMGIVFVERLSQLKQGRIKTKLK
                     KRQKHTI"
     gene            6226..7152
                     /gene="fmt"
                     /locus_tag="ACFJAG_001251"
     CDS             6226..7152
                     /gene="fmt"
                     /locus_tag="ACFJAG_001251"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004479 - methionyl-tRNA formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0071951 - conversion of methionyl-tRNA to
                     N-formyl-methionyl-tRNA [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HFC3980530.1"
                     /translation="MKVIFAGTPDFAAAALKAVAAAGFEIPLVLTQPDRPKGRGMQLT
                     APPVKQAALELGLRVAQPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQDVLDTPKH
                     GCLNIHASLLPRWRGAAPIQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTD
                     TANEVHDALMEIGAAAVVADLQQLQSKGRLNAVKQPEEGVTYAQKLSKEEARIDWSES
                     ADIIERKIRAFNPVPAAWVEYQGKPMKIRRAEVVAQQGTAGEVLSCSADGLVVACGES
                     ALKITELQPAGGRRMNIAAFAAGRSIEAGAKL"
     gene            7231..8490
                     /gene="rsmB"
                     /locus_tag="ACFJAG_001252"
     CDS             7231..8490
                     /gene="rsmB"
                     /locus_tag="ACFJAG_001252"
                     /EC_number="2.1.1.176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0001510 - RNA methylation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /protein_id="HFC3980531.1"
                     /translation="MSMALAQKLAADSIAAVAEGRNLQDVLAHIRAAHPQLTAQENGA
                     LQDIAYGCQRYLGSLKHMLAQMLKKPIDNPQLESLLLAALYQLHYTRNAPHAVVNEAV
                     ESIAKIGRGQYRSFANAVLRRFLREREKLAASCKKDDVAKYNLPLWWVAYLKNHYPKH
                     WHNIAAALQSHPPMTLRVNRRHGNAESYLEKLAVEGIAAKALDEYAVTLEEAVPVNRL
                     PGFAEGLVSVQDFGAQQAAYLLNPKDGERILDACAAPGGKTGHILELADCRVTALDID
                     AGRLKRVEDNIARLGFQTASAACADARDLAAWYDGKPFDAILADVPCTASGVARRNPD
                     VKWLRRPTDAAKTARRQEALLDALWQVLKQGGRMLLATCSVFVEENDGQLQKFLNRHA
                     DAEPIESRVLLPNKHQDGFYYALIQKH"
     gene            8456..9055
                     /locus_tag="ACFJAG_001253"
     CDS             8456..9055
                     /locus_tag="ACFJAG_001253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4390 domain-containing protein"
                     /protein_id="HFC3980532.1"
                     /translation="MAFITRLFKSIKQWLVLLPILSVLPDAAAEGIAATRAEARITDG
                     GRLSISSRFQTELPDQLQQALRRGVPLNFTLSWQLSAPTIASYRFKLGQLIGDDDNID
                     YKLSFHPLTNRYRVTVGAFSTDYDTLDAALRATGAVANWKVLNKGALSGAEAGETKAE
                     IRLTLSTSKLPKPFQINALTSQNWHLDSGWKPLNIIGNK"
     gene            9055..11175
                     /locus_tag="ACFJAG_001254"
     CDS             9055..11175
                     /locus_tag="ACFJAG_001254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HFC3980533.1"
                     /translation="MRRFLPIAAICAVVLLYGLTAATGSTSSLADYFWWIVSFSAMLL
                     LVLSAVLARYVILLLKDRRNGVFGSQIAKRLSGMFTLVAVLPGLFLFGISAQFINGTI
                     NSWFGNDTHEALERSLNLSKSALDLAADNAVSNAVPVQIDLIGTASLSGNMGSVLEHY
                     AGSGFAQLALYNAASGKIEKSINPHQFDQPLPDKEHWEQIQQTGSVRSLESIGGVLYA
                     QGWLSAGTHNGRDYALFFRQPIPENVAQDAVLIEKARAKYAELSYSKKGLQTFFLVTL
                     LIASLLSIFLALVMALYFARRFVEPILSLAEGAKAVAQGDFSQTRPVLRNDEFGRLTK
                     LFNHMTEQLSIAKEADERNRRREEAARHYLECVLDGLTTGVVVFDEKGRLKTFNKAAE
                     QILGMPLAPLWGSSRHGWHGVSAQQSLLAEVFAAIGAAAGTDKPVQVEYAAPDDAKIL
                     LGKATVLPEDNGNGVVMVIDDITVLIRAQKEAAWGEVAKRLAHEIRNPLTPIQLSAER
                     LAWKLGGKLDDQDAQILTRSTDTIIKQVAALKEMVEAFRNYARAPSLKLENQDLNALI
                     GDVLALYEAGPCRFEAELAGEPLMMAADTTAMRQVLHNIFKNAAEAAEEADMPEVRVK
                     SETGQDGRIVLTVCDNGKGFGKEMLHNAFEPYVTDKPAGTGLGLPVVKKIIGEHGGRI
                     SLSNQDAGGACVRIILPKTVETYA"
     gene            11168..12445
                     /locus_tag="ACFJAG_001255"
     CDS             11168..12445
                     /locus_tag="ACFJAG_001255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent transcriptional regulator"
                     /protein_id="HFC3980534.1"
                     /translation="MRSSDILIVDDEVGIRDLLSEILQDEGYSVALAENAEEARKLRH
                     QARPAMVLLDIWMPDCDGITLLKEWAKNGQLNMPVVVMSGHASIDTAVEATKIGAIDF
                     LEKPISLQKLLSAVENALKHGAAQIETGPVFDKLGNSAAIQEMNREVEAAAKRTSPVF
                     LTGEAGSPFETVARYFHKNGTPWVSPARVEYLIDMPMELLQKAEGGVLYVGDIAQYSR
                     NIQTGITFIIGKAERCRVRVIASCSYAAGSDGISCEEKLAGLFSESVVRIPPLSMQHE
                     DIPFLIQGIACNVAESQKITPTAFSDDALAVLSRYDWPGNFEQLQNVVTTLLLEADGQ
                     EIGIGAASSALGRGVPADGTGHMACGFDFNLPLRELREEVERRYFEYHIAQEGQNMSK
                     VAQKVGLERTHLYRKLKQLGIGVSRRAGEKTEE"
     gene            12536..13723
                     /gene="dprA"
                     /locus_tag="ACFJAG_001256"
     CDS             12536..13723
                     /gene="dprA"
                     /locus_tag="ACFJAG_001256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009294 - DNA-mediated transformation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-processing protein DprA"
                     /protein_id="HFC3980535.1"
                     /translation="MTEDERFAWLQLAFTPYIGAESFLLLMRSFGSAQNALSAPAEQV
                     APAVRHKHALEAWRNAEKRALARQAAEAALEWEMRDGCRLMLLQDEDFPEMLTQGLTA
                     PPVLFLRGNVRLLHKPSAAIVGSRHATPQAMRIAKDFGRALGGKGIPTVSGMASGIDT
                     AAHQGALEAEGGTIAVWGTGIDRIYPPANKNLAYEIAEKGLIVSEFPIGTRPYAGNFP
                     RRNRLIAALSQVTLVVEAALESGSLITAGLAAEMGREVMAVPGSIDNPHSKGCHKLIK
                     DGAKLTECLDDILNECPGLLQNTGASSYSINKDTPDTGRRAVQTAYAPPPAAKMPSEG
                     AAGGTAVGGILDKMGFDPVHPDVLAGQLAMLAADLYAALLELELDGSVAAMPGGRYQR
                     IRT"
     gene            13749..14210
                     /locus_tag="ACFJAG_001257"
     CDS             13749..14210
                     /locus_tag="ACFJAG_001257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF494 family protein"
                     /protein_id="HFC3980536.1"
                     /translation="MTEVIAYLIEHFQDFDTCPPPEDLGMLLEEAGFDTMEIGNTLMM
                     MEVLLNSSEFSAEPAGSGALRVYSKEETDNLPQEVMGLMQYLIEEKAVSCEQREIIIH
                     ALMHIPGDEITVDTAKVLTLLLLWANKSELPVLVGDELMSALLLDNKPTMN"
     gene            14282..16588
                     /gene="topA"
                     /locus_tag="ACFJAG_001258"
     CDS             14282..16588
                     /gene="topA"
                     /locus_tag="ACFJAG_001258"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003917 - DNA topoisomerase type I (single
                     strand cut, ATP-independent) activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HFC3980537.1"
                     /translation="MAKNLLIVESPSKAKTLKKYLGGDFEILASYGHVRDLVPKSGAV
                     DPDNGFAMKYQLISRNGKHVDAIVAAAKEAENIYLATDPDREGEAISWHLLEILKSKR
                     GLKNIKPQRVVFHEITKNAVLDAVAHPREIEMDLVDAQQARRALDYLVGFNLSPLLWK
                     KIRRGLSAGRVQSPALRLICERENEIRAFEAQEYWTVHLDSHKGRSKFTAKLAQYNGA
                     KLEQFDLPDEAAQADVLKELEGKEAVVTAIEKKKRSRNPAAPFTTSTMQQDAVRKLGF
                     TTDRTMRTAQQLYEGIDVGQGAIGLITYMRTDSVNLADEALTEIRHYIENKIGKEYLP
                     SAAKQYKTKSKNAQEAHEAIRPTSVYRTPESVKPFLSADQFKLYQMIWQRTVACQMTP
                     AKFDQTTVDITVGKGVFRVTGQVQTFAGFLSVYEESSDDEESEDGKKLPEMSEGDKLP
                     VDKLYGEQHFTTPPPRYNEATLVKALEEYGIGRPSTYASIISTLKDREYVTLEQKRFM
                     PTDTGDIVNKFLTEHFAQYVDYHFTAKLEDQLDEIADGKRQWIPVMDKFWKPFIKQVE
                     EKEGIERAKFTTQELNETCPKCGEHKLQIKFGKMGRFVACAGYPECSYTRNVNETAEE
                     AAERIAKAEAEQAELDGRECPKCGGRLAYKYSRTGSKFIGCANYPKCKHVEPLEKPKD
                     TGVQCPQCKKGNLVERKSRYGKLFYSCSTYPDCNYATWNPPVAEECPNCHWPVLTIKT
                     TKRRGVEKVCPQKECGWKEQIEPPAPQE"
     gene            16809..16937
                     /locus_tag="ACFJAG_001259"
                     /pseudo
     CDS             16809..16937
                     /locus_tag="ACFJAG_001259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686973.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
     gene            16927..17471
                     /locus_tag="ACFJAG_001260"
                     /pseudo
     CDS             16927..17471
                     /locus_tag="ACFJAG_001260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017805306.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
BASE COUNT         4186 a         4714 c         5062 g         3601 t
ORIGIN      
        1 gacagtacaa atagtacgaa accgattcac ttggtgcttc agcaccttag ggaatcgttc
       61 tctttgagct aaggcggggc aacgccgtac tggtttttgt taatccacta taaatagcga
      121 gcatcgattc acggtgcgct ttagtgcaaa gcgtacaacg cgagcctgaa ccaccagccg
      181 caataggaaa agaaagccga tagagtgcaa tgcttgccaa cgcgcaagcg agcttgcaag
      241 aacgcttggc tcaacgagag caggcaagac agaaagcagg ataggagagg caacgcaaag
      301 gtctcgggct ttgatttcgc cgtaaacctg agtgccgcct tgtccggacg gggtggttca
      361 ggcggcgggt gccgacaggg tgcagatgag gaggagtatt ttcatttggg gtcgcaacgg
      421 aagtggtagg cgcagatttc aaaaccgttt ttgaaataca ggcggtgcgc gtcggtacgg
      481 tcgtggttga cgtggacgtt aaggtggatt ttggtaaccc ctgtttccgc gctgattttg
      541 cggacttctt ccaaaaggcg cgaggcgtag cctttgcggc ggctttgcgg cagggtaacg
      601 atgtcgtcga tgtggatgtg gcggccgccg gcgagggtgc aggcttcgcg gaagccgcag
      661 acagcgacgg cgttgtgttt gccttcttca aaaatgccca gcaggcggta gccttggggg
      721 cgttgggttt tgttgatctg ttcggtaaag cggccgatgt cggtcagggc ggaacgcaaa
      781 acactcaagg ctgcaaaggc ggtggcggtg tcgtccgcgc cgatttcgcg taaaacgtag
      841 gatgcgcccg aggcggtctg ttcctgtgtt ttctcggcgg cgtgtttttc ttcgattgcc
      901 tgtgccagca ggacgcgttc gttggcaggg tcgttttgtc cgccctgttc gcgttcttcg
      961 agcagggctt tgcagtcgat gacgcgcagg tcgttgtcgg cggcaaagtc catcaggaag
     1021 cggaacatct gcggattgtc ggtttccagt tttttatcga cggcgacgca gcggatgttg
     1081 tccaccagca tggggcgcac ccatttcgaa taggagaggc ggttgtcttt ggtgaacgag
     1141 gacaggatgc cgcacaggcg tttcgcccag tcgctggggc ggaaaatctt gccggaactc
     1201 gttgtgccgt ggatgacgac ttcgtagggg ttgcagatta acatggcggc ttcctgaaaa
     1261 gaaatgtctg gcgcgattat accttatgct tatgcgggcg tgtttggata tgccgtctga
     1321 aaaatacagg attcgtgcgg taaaactttg tggaggcaaa tgtgcgataa tacgcgccgt
     1381 gtcgccgctt ttgcgaagct gttccgcaaa catacgggcg gcgtggacgt ataaccggat
     1441 gcccgcctga cgcgggtttt ttacggaagg ggggcaaaat gcctaatccg ctttacagac
     1501 agcacatcat ctccatttcg gatttgtcgc gcgaacagtt ggaatgcctg cttcagacgg
     1561 cattgaagct gaaggcgcat ccgcgcggcg atttgttgga aggcaaactc atcggttcgt
     1621 gctttttcga gccgtccacg cgcacgaggc tgtcgtttga aacggcggtg cagcgtttgg
     1681 gcggtaaggt catcggcttt tcggacggcg cgaataccag tgccaaaaaa ggcgaaacgc
     1741 ttgccgatac cgcccgtatc atttccggct acaccgacgc gattgtccaa cgccatccca
     1801 aagacggcgc ggcgcgcgtg gcggcggagt tttcgcgcgt ccccgtcatc aacgccggcg
     1861 acggcacgaa ccagcaccct agccaaacct tgttggacct ggtaacgatt tatgaaacgc
     1921 aggggcgttt ggacaagctt aaaatcgcca tggcgggcga cttgaaatac gggcgcaccg
     1981 tgcattcgct gtgtcaggcg ttgaaacgct ggggctgcga atttgccttc gtctcgccgc
     2041 ccagcctcgc gatgcccgac tacattaccg aagagttgga agaagccgac tgccgatacc
     2101 gcgccctcgg cagtttggaa gaggcggcgg aatgggcgga catcctgtat atgacccgcg
     2161 tccagcgcga acgtttcgac gaacaggaat ttgccaaaat ccaaggcaaa ttcaacctcg
     2221 aagcgtctat gctcgcccgc gccaaaccga acctgcgcgt gctgcacccc ctgccgcgca
     2281 cggacgaaat ccaccccgat gtcgatgccg cgccgcacgc ctattatttc gagcaggcga
     2341 ccaacggcgt ttatgcgcgt atggcgatat tgtcgctggt gttgaacgaa gaagtgtgag
     2401 gaaccgatat ggaagcgcaa aaactcagtg tcgaagccat cgaaaaaggc acggttatcg
     2461 accatattcc cgccggcagg gggctgacca tcctgcgcca gttcaaactt ttgcactacg
     2521 gcaacgcggt aaccgtgggc ttcaacctgc ccagcaaaac ccagggcagc aaagacatca
     2581 tcaaaatcaa aggcgtgtgc ttggacgata aagccgccga ccgcctcgcc ctgttcgccc
     2641 ccgaagcggt ggtcaacacc atcgacaatt tcaaggtcgt acagaagcgg catttgaccc
     2701 tgcccgacga aatcgccgaa gtgttccgct gcccgaatcc caattgcgcc ggccacggcg
     2761 agccggtcaa aagccggttt tatgttaaga aacacaacgg gcagacgcgg ctgaaatgcc
     2821 actactgcga aaaaacctac aaccgggatt cggtggcgga agcctgacgg attcccgagc
     2881 ccggcggcgg aattttgcct gccgcctgtt ttgccaatct gaaatggaat gatgatgcac
     2941 gcttctgtcc aaagtcgttt cgcaccgata ctttatgttt tgattttctt tgccggtttt
     3001 ttgaccgcgc aaatctggtt caatcagaaa gcctatactg aagagctgcc tccgcttctg
     3061 tccgcattgt ccgccgtcgc gctggtgtgg ctggcgtggg cgttcgtgtc ggtgcgttca
     3121 aaggctaagg cagaaaagtt ctaccgcgaa aaaatgatac agaacgaaag catacacccc
     3181 gtcctgcacg cttctttgca acacttggaa cacaagccgc aaatgctcgc cctgctggtc
     3241 aaaaaccacg gcaaaggcat ggcggaacag gtcaggttca aggcggaagt gctgcccgac
     3301 gacgaagacg cgcgcacgat tgccgccgag ttggcaaaaa tggatatgtt cgcattgggg
     3361 acggacgcgg tcgcctcggg cgaaacctat gggcgcgtgt tcgccgatat tttcgagttg
     3421 tcggcggctt tggaagggcg cgcgttcaaa gggatactga aactgacggc ggaatataaa
     3481 aaacatcttc ggcgatgcct gccgttcgga aacggcgttg gatttgggcg cgctcaatca
     3541 ggcgttgagg gaaatctcga aaacgccgga aaagcctaag cagatatttt attgaaggtg
     3601 tcccgatgta tggggagcgc acgggtggcg cggcggcaaa gcggcaagat tgggtttgga
     3661 tacccggttg gttttatagt agattaacaa aaatcaggac aaggcggcgg gccgcagaca
     3721 gtacaaatag tacggaatcg gttcgcccgg tgcttgggca ccttagggaa tcgttccctt
     3781 tgagccgggg cggggcaacg ccgtaccggt ttttgttaat tcgctatatc tgtctgcaag
     3841 ggagacagcc gctgtgattt ccgttcgggc ggaaaccgat tccatcggat aaaaggcatt
     3901 ttgtccgact aaatcagggt tttgcatcaa cgggatatga aaacacagcc taaataaaaa
     3961 tgccgtctga atgcttcaga cggcattgtt gccgaggggt tattggaaag ggtcggaatc
     4021 gacgcgggcg cggccctgat ccggcatatt gtccaaatcc cgtcccggat tggcggcggt
     4081 gtcgccttcg gaaatatcgg agatgttttc caaaataatg gcgtaagcca gtttcggcgc
     4141 agtgtggtaa accattgcca agcccacttc ttcggcaggt gtcgaaatca gctcgacggt
     4201 atccctgctt ttaggttctt cggtcaaatt gttggagagg ttgacctgca tcgttttctt
     4261 gcgtttgtaa aggcttaaaa ctgcgccttt gtccaaaccg tcgtccccgc ctttgtctat
     4321 cgtaatggtt ttgaactgtc cgccgacccc cacgccttca aacacggaaa cgatttttgc
     4381 ctgaaccggg cgggacggtt cgtgcggcac catattgaag cggtcggtgt cttccggcat
     4441 tttcatcagg tagtcgccct gctgtatttc ggaaatggcg gtttcgacca ccagcggctg
     4501 tatcgaacgg gtgcgcaccg gggtaatcaa aggatgggtg cgggtgtagt attcgttgtc
     4561 tttcagccgt tcttcagcct gtttcgagcg ttgttcgagg gcggagtcgg tatagtcgag
     4621 ggagcgcacg atgccgctga atgcgacttc ttgtccgagg aatttacccg tatccggatc
     4681 ggtgatgttt ttattgattc ggtaggtcag ataacggccc ggctctttca ggcctttggt
     4741 gtaaaccctg gcgcctttgg tgtacagcag cctgccttcc gggcccgaga gcaggcgcgg
     4801 cgcggcagcg gtttctttgc gggaaacgat ttgcgggtgc tgcataaaga cgcggtagaa
     4861 gttgacatcg atggcgggaa taccgtatcc ggacacttcc ttatccggac tgattttgac
     4921 gacggggatg ccgtctgtct gttccaaatc aaggcgcggt tcgccgccaa cgtagcgcaa
     4981 caccaatacc tggcccggat aaatcaggtc gggattgtgg atttgatccc ggttcgcgcc
     5041 ccacaggcgg caccattgcc acgggctgta caggtatttg cccgaaatac cccacagggt
     5101 gtcgccctgt ttgaccgtgt agcgttgcgg cgcatccggg cgcacctcca gatttgccgc
     5161 caaagtttgt gttgagaatg ccatacctgc cgcgcagagc agggttataa tacgacgttg
     5221 cataaccgtt ccccttatct gataaatttc ggtttgtctt gcttgattgg gttggaaaaa
     5281 gcggcggcag cccctcggga tgtgccgcat gataacaaat gttccgcatt ttaacatcga
     5341 attatccgta ccatcacggt aattatgaaa aacaggcggc gtatccgccg aaggaaagag
     5401 aaaattatgg ctttactgaa tatagagcag ggttataata cgacgttgca taaccgttcc
     5461 ccttatctga taaatttcgg tttgtcttgc ttgattgggt tggaaaaagc ggcggcagcc
     5521 cctcgggatg tgccgcgtga taacaaatgt tccgcatttt aacatcgaat tatccgtacc
     5581 atcacggtaa ttatgaaaaa caggcggcgt atccgccgaa ggaaagagaa aattatggct
     5641 ttactgaata tcttgcaata tcccgacgag cgtctgcaca cggtggcaaa gcctgtcgaa
     5701 caagttgacg agcgcatccg gaagctggtt gccgatatgt ttgaaacgat gtacgaatcg
     5761 cgcggcatcg ggctggcggc gacgcaggtc gatgtgcacg aacgcgtggt cgtgatggat
     5821 ttgaccgaag accgcagcga accgcgcgtg ttcatcaacc ccgtcatcgt tgaaaaagac
     5881 ggcgaaacca cttacgaaga gggctgcctg tccgtaccgg gcatttacga cgccgttacc
     5941 cgcgccgaac gcgtcaaggt cgaggctttg aacgaaaaag gcgaaaaatt cacgctggag
     6001 gcggacgggc tgctggcgat ttgcgtgcag cacgagttag atcacctgat gggcatcgtg
     6061 tttgtcgaac gcctttccca actcaagcag gggcggatta agaccaaact gaaaaaacgt
     6121 cagaaacata cgatttgatt cgcttcgtca tgccgtctga acgctgcaag gctttcagac
     6181 ggcacagcct tgtccgacaa ctttacgcac acgcaggaac acgctatgaa agtcatcttt
     6241 gccggcacgc ccgattttgc cgccgccgcc ttaaaagccg ttgccgccgc cggttttgaa
     6301 atcccgctgg tgctgaccca gcccgaccgt ccgaaagggc gcggtatgca actgaccgcc
     6361 ccgcctgtca aacaagccgc gctggaactc ggtttgcgcg tggcacagcc cgaaaaactg
     6421 cgcaacaacg ccgaagccct gcaaatgctc aaagaggtcg aggcggacgt aatggtggtt
     6481 gccgcgtacg gcttgattct gccgcaggac gtgttggata cgccgaaaca cggctgcctc
     6541 aatatccatg cttcgctgct gccccgttgg cgcggcgcgg cgccgattca gcgcgcgatt
     6601 gaggccggcg atgccgaaac cggcgtgtgt attatgcaga tggacatcgg tttggacacc
     6661 ggcgatgtgg tcagcgaaca ccgctacgcc atccaaccta ccgatactgc caacgaagtc
     6721 cacgacgcgc tgatggaaat cggtgcggcg gcggttgttg ccgatttgca acagcttcaa
     6781 agcaaaggcc gtctgaacgc ggtcaaacag cccgaagaag gcgtaactta cgcccaaaaa
     6841 ctaagcaaag aagaagcgcg tatcgattgg agcgaaagcg cggacattat cgaacgcaaa
     6901 atccgcgcct tcaaccccgt gcctgccgcg tgggtcgaat atcagggcaa gccgatgaaa
     6961 atccggcgtg ccgaagtggt ggcgcaacaa ggtacggcag gcgaagtgtt gtcctgttcg
     7021 gcggacggtt tggtcgttgc ctgcggcgaa agcgcgctga agattaccga attgcagcct
     7081 gccggcggca ggcgtatgaa tattgcggcg tttgcggcgg gacggtctat tgaagcaggg
     7141 gcgaagctgt aaatcccttc agacggcatt ccgatccgca aacgggaatg ccgtctgaaa
     7201 ccatcagttg aagaaagcga atcacataat atgagtatgg cacttgccca aaaacttgcc
     7261 gccgacagca ttgcggcggt tgccgaaggg cgcaaccttc aggacgtgtt ggcgcacatc
     7321 cgcgcggcgc atccgcagct gacggcgcag gaaaacggcg cgttgcagga tatcgcctac
     7381 ggctgccagc gttatttggg cagtttgaaa catatgctcg cgcagatgct gaaaaagccc
     7441 atcgacaatc cgcagctcga aagcctgctt ttggcggcgt tgtaccaact gcattacacg
     7501 cgcaacgcgc cccacgccgt ggtcaacgaa gctgttgaaa gcatagccaa aatcgggcgc
     7561 gggcagtacc gttcgtttgc caacgcggtt ttgcgccgct ttttgcgcga acgtgaaaaa
     7621 ttggcggctt cctgcaaaaa agacgatgtg gcgaaataca acctgccgct gtggtgggtt
     7681 gcctacctga aaaaccatta tccgaaacac tggcacaaca tcgccgccgc gctgcaatcc
     7741 catccgccga tgacgttgcg cgtcaaccgc cggcacggca acgccgaaag ctatttggaa
     7801 aaactggctg tggaaggtat cgcggctaag gcgttggacg aatatgcggt tacgttggaa
     7861 gaagccgtgc cggtaaaccg tctgcccggt tttgccgaag gactggtgtc ggtacaggac
     7921 ttcggcgcgc agcaggcggc gtatctcctt aacccgaaag acggcgaacg gattttggac
     7981 gcgtgcgccg cgccgggcgg caagacgggg catattttgg aactggcgga ctgccgcgtt
     8041 accgccttgg acatcgatgc aggccgtctg aagcgtgtgg aggacaatat cgcccgtttg
     8101 ggctttcaga cggcatcggc ggcgtgtgcc gatgcgcggg atttggcggc gtggtatgat
     8161 ggaaagcctt tcgacgcaat ccttgccgac gtgccgtgca ccgcttccgg cgtggcgcgg
     8221 cgcaatcccg acgtgaaatg gctgcgccga ccgaccgatg ccgccaaaac cgcccgccgg
     8281 caggaagccc tgctggacgc attgtggcag gtgctgaaac agggcggcag aatgctgctt
     8341 gccacctgtt ccgtgttcgt cgaagaaaac gacgggcaac tgcaaaaatt cctcaaccgc
     8401 catgccgatg ccgaaccgat cgaatcgcgg gtgcttttac cgaacaaaca ccaagatggc
     8461 ttttattacg cgcttattca aaagcattaa acaatggctt gtgctgttgc cgatactctc
     8521 cgttttgccg gacgcggcgg cggagggcat tgccgcgacc cgcgccgaag cgaggataac
     8581 cgacggcggg cggctttcca tcagcagccg cttccaaacc gagctgcccg accagctcca
     8641 acaggcgttg cgccggggcg taccgctcaa ctttacctta agctggcagc tttccgcccc
     8701 gacaatcgct tcttatcggt ttaaattggg gcaactgatt ggcgatgacg acaatattga
     8761 ctacaaacta agtttccatc cgctgaccaa ccgctaccgc gttaccgtcg gcgcattttc
     8821 caccgattac gacactttgg atgcggcatt gcgcgcgacc ggcgcggttg ccaactggaa
     8881 agtcctgaac aaaggcgcgt tgtccggtgc ggaagcaggg gaaaccaagg cggaaatccg
     8941 cctgacgctg tccacttcaa aactgcccaa gcctttccaa atcaacgcat tgacttctca
     9001 aaactggcat ttggattcgg gttggaaacc tctaaacatc atcgggaaca aataatgcgc
     9061 cgcttcctac cgatcgcagc catatgcgcc gtcgtcctgc tgtacggatt gacggcggcg
     9121 accggcagca ccagttcgct ggcggattat ttctggtgga tagtctcgtt cagcgcaatg
     9181 ctgctgctgg tgttgtccgc cgttttggca cgttatgtca tattgctgtt gaaagacagg
     9241 cgcaacggcg tgttcggttc gcagattgcc aaacgccttt ccgggatgtt cacgctggtc
     9301 gccgtactgc ccggcttgtt cctgttcggc atttccgcgc agtttatcaa cggcacgatt
     9361 aattcgtggt tcggcaacga cacccacgaa gccctcgaac gcagccttaa tttgagcaag
     9421 tccgcactgg atttggcggc agacaatgcc gtcagcaacg ccgttcccgt acagatagac
     9481 ctcatcggca ccgcctccct gtcgggcaat atgggcagtg tgctggaaca ctacgccggc
     9541 agcggttttg cccagcttgc cctgtacaat gccgcaagcg ggaaaatcga aaaaagcatc
     9601 aatccgcacc aattcgacca gccgcttccc gacaaagaac attgggaaca gattcagcag
     9661 accggttcgg ttcggagttt ggaaagcata ggcggcgtat tgtacgcgca gggatggttg
     9721 tcggcaggta cgcacaacgg gcgcgattac gcgctgttct tccgccagcc gattcccgaa
     9781 aatgtggcac aggatgccgt tctgattgaa aaggcgcggg cgaaatatgc cgaattgagt
     9841 tacagcaaaa aaggtttgca gacctttttt ctggtaaccc tgctgattgc ctcgctgctg
     9901 tcgatttttc ttgcgctggt aatggcactg tattttgccc gccgtttcgt cgaacccatt
     9961 ctgtcgcttg ccgagggcgc aaaggcggtg gcgcagggtg atttcagcca gacgcgcccc
    10021 gtattgcgca acgacgagtt cggacgtttg accaagctgt tcaaccatat gaccgagcag
    10081 ctttccatcg ccaaagaagc agacgaacgc aaccgccggc gcgaggaagc cgcccgccac
    10141 tacctcgagt gcgtgttgga tgggttgact accggtgtgg tggtgtttga cgaaaaaggc
    10201 cgtttgaaaa ccttcaacaa ggcggcggaa cagattttgg ggatgccgct cgcccccctg
    10261 tggggcagca gccggcatgg ttggcacggc gtttcggcgc agcagtccct gcttgccgaa
    10321 gtgtttgccg ccatcggtgc ggcggcaggt acggacaaac cggtccaggt ggaatatgcc
    10381 gcgccggacg atgccaaaat cctgctgggc aaggcgacgg tattgcccga agacaacggc
    10441 aacggcgtgg tgatggtgat tgacgacatc accgtgctga tacgcgcgca aaaagaagcc
    10501 gcgtggggtg aagtggcgaa gcggctggca cacgaaatcc gcaatccgct cacgcccatc
    10561 cagctttccg ccgaacggct ggcgtggaaa ttgggcggga agctggacga tcaggacgcg
    10621 caaatcctga cgcgttcgac cgacaccatc atcaaacagg tggcggcgtt aaaagaaatg
    10681 gtcgaggcat tccgcaatta cgcgcgcgcc ccttcgctca aactggaaaa tcaggatttg
    10741 aacgccttaa tcggcgatgt tttggccctg tacgaagccg gcccgtgccg gtttgaggcg
    10801 gaacttgccg gcgaaccgct gatgatggcg gcggatacga ccgccatgcg gcaggtgctg
    10861 cacaatattt tcaaaaatgc cgccgaagcg gcggaagaag ccgatatgcc cgaagtcagg
    10921 gtaaaatcgg aaacggggca ggacggacgg attgtcctga cggtttgcga caacggcaag
    10981 ggattcggca aggaaatgct gcacaatgct ttcgagccgt atgtgacgga taagccggcg
    11041 ggaacgggac tgggtctgcc tgtagtgaaa aaaatcattg gagaacacgg cggccgcatc
    11101 agcctgagca atcaggatgc gggtggggcg tgtgtcagaa tcatcttgcc aaaaacggta
    11161 gaaacttatg cgtagcagcg atattttaat tgtagacgac gaagtcggca tccgcgacct
    11221 gctgtcggaa atcctgcagg acgaaggcta ttcggtcgcg ttggcggaaa atgccgaaga
    11281 ggcgcgcaag ctgcgccatc aggcgcgccc ggcaatggtg ctgctggata tttggatgcc
    11341 cgattgcgac ggtatcaccc ttttgaagga gtgggcgaaa aacgggcagc tcaatatgcc
    11401 ggtggtggtg atgagcgggc atgccagcat cgataccgcc gtagaagcga ccaaaatcgg
    11461 cgcgatcgat tttttggaaa aaccgatttc cctgcaaaag ctgctgtctg cggtcgaaaa
    11521 cgcgttgaaa cacggtgcgg cgcaaatcga aacgggaccg gtgttcgaca aactgggcaa
    11581 cagtgccgcg attcaagaga tgaaccgcga agtcgaagcg gcggcaaagc gcacgtcccc
    11641 tgtatttttg acgggcgagg cgggttcgcc gtttgaaacc gtggcgcgct atttccataa
    11701 aaacggtacg ccgtgggtca gtccggcaag ggtcgaatat ctgatcgata tgccgatgga
    11761 actgttgcag aaggcggagg gcggcgtttt gtatgtcggc gacatcgccc aatacagccg
    11821 caatatccaa accggcatta cctttatcat cggcaaggca gaacgctgcc gtgtcagggt
    11881 gattgcttcg tgcagctacg cggcaggttc agacggcatt tcatgtgaag aaaaattggc
    11941 cgggcttttt tcggaatcgg tcgtccgtat tccgcccctg agtatgcagc atgaagacat
    12001 tcccttcctg atacagggga ttgcctgcaa tgtggcggaa agccaaaaaa tcacgcctac
    12061 cgcattcagt gacgatgcgc ttgccgtatt gtcccgttac gactggccgg ggaatttcga
    12121 gcagttgcaa aacgtcgtga caacgctgct gctggaggcg gacgggcagg aaatcggtat
    12181 cggcgcggct tcttcggcac tggggcgcgg tgtgcctgcc gacggaacgg ggcatatggc
    12241 gtgcgggttc gactttaacc tgccgctgcg cgaattaagg gaggaggtgg agcggcgtta
    12301 tttcgagtac cacatcgccc aagaaggtca gaatatgagc aaagtggcgc agaaggtcgg
    12361 tttggaacgc acgcaccttt accgcaaact caaacagctc ggcatcggcg tttcgcgccg
    12421 ggcgggggaa aaaaccgaag aataggcccg gacggccggt ttcccggctg cgggcttttg
    12481 ttttcagacg gcatttggag aaaatgccgt ctggaatcgt aaggggatgg attttatgac
    12541 agaggacgaa cgtttcgcgt ggctgcaatt ggcgtttacg ccctatatcg gcgcggaaag
    12601 tttcctgctg ctgatgcgca gtttcggcag cgcgcaaaat gccttgtccg caccggcgga
    12661 acaggttgcc ccggcggtgc ggcataagca cgcgcttgag gcttggcgca atgcggaaaa
    12721 acgcgctttg gcgcggcagg cggcagaagc ggcgttggaa tgggaaatgc gggacggatg
    12781 ccgcctgatg ctgcttcagg atgaagattt ccccgaaatg ctgacgcagg ggctgaccgc
    12841 gccgccggtt ttgtttttgc gcggcaacgt gcggctgctg cacaagcctt ccgccgccat
    12901 cgtcggcagc cgccatgcca cgccgcaggc gatgcggatt gccaaagatt tcggcagggc
    12961 gttgggtggg aaaggcattc ctaccgtgtc gggtatggct tcgggcatcg acaccgccgc
    13021 ccatcagggc gcactggagg cagaaggcgg caccatcgcc gtgtggggga cgggcataga
    13081 ccgcatttat ccgccggcca acaaaaacct tgcctatgaa atcgccgaaa aagggctgat
    13141 tgtcagcgag ttccccatcg gcacgcggcc gtatgccggc aactttccgc gccgcaaccg
    13201 cctgattgcc gcgctgtcgc aggttacgct ggtggtcgag gccgccttgg aatccggttc
    13261 gctgattacc gccggcctgg cggcagaaat ggggcgcgaa gtgatggcgg tacccggttc
    13321 gatagacaac ccccacagca aaggctgcca caaactgatt aaagacggag cgaaactgac
    13381 ggaatgtttg gacgacatcc tgaacgaatg cccggggcta ttgcaaaata cgggtgcttc
    13441 gtcatattct ataaataagg atacgcccga cacgggccgc cgcgccgttc agacggcata
    13501 cgccccgccg cctgctgcaa aaatgccgtc tgaaggggcg gcaggcggca cagccgtcgg
    13561 cggcatactg gataaaatgg gtttcgaccc ggttcatccc gacgtgcttg ccggacagtt
    13621 ggctatgctt gccgcagatt tgtatgccgc actgttggaa ttggaattgg acggcagcgt
    13681 tgccgcaatg cccggcggca gataccagcg tatccgaact tgaacgcact ttatattaag
    13741 gaacacgaat gaccgaagtc atcgcctacc tcatcgaaca tttccaagat ttcgatacct
    13801 gcccgccgcc cgaagacttg ggtatgctgc ttgaagaagc gggtttcgat acgatggaaa
    13861 tcggcaacac cctgatgatg atggaagtat tgctcaacag ctccgaattt tccgccgaac
    13921 ccgccggcag cggcgcattg cgcgtgtaca gcaaagaaga aaccgacaac ctgccgcagg
    13981 aagtgatggg gctgatgcag tatctgattg aagaaaaagc cgtcagctgc gaacagcggg
    14041 aaatcatcat ccacgcgctc atgcacatcc ccggcgacga aattaccgta gataccgcca
    14101 aagtgctgac cctgctgctt ttatgggcaa acaagagcga gctgcccgtg ttggtcggcg
    14161 acgagctgat gagcgcgctt ttactcgaca acaaacccac gatgaactga agcggcttca
    14221 gacggcccgc ccgaggccgt ctgaaacgcc ggcatcaaaa ccaccatcca gagaacgaca
    14281 aatggcgaaa aacctattaa tcgtcgaatc cccgtccaaa gccaaaaccc tgaaaaaata
    14341 tttgggcggc gattttgaaa tccttgcatc ctacggacac gtccgcgacc tcgtccccaa
    14401 aagcggcgcg gtcgatcccg acaacggctt tgcgatgaaa taccaactca tcagccgcaa
    14461 cggcaaacat gtcgatgcga ttgttgccgc tgccaaagaa gccgaaaaca tctacctcgc
    14521 aaccgacccg gacagggaag gcgaagccat ttcctggcat cttttggaaa tcctcaaatc
    14581 caaacgcggc ctgaaaaaca tcaagccgca gcgcgtcgtg ttccacgaaa tcaccaaaaa
    14641 cgccgtgctc gatgcggttg cccatcctcg cgaaatcgaa atggatttgg tcgatgcgca
    14701 acaagcccgt cgcgctctgg actatctggt cggtttcaac ctctcgccgt tgctgtggaa
    14761 aaaaatccga cgcggtttga gcgcgggccg cgtgcaaagc cctgctttgc gcctgatttg
    14821 cgaacgcgaa aacgaaatcc gcgcgtttga agcgcaggaa tattggacgg tacatctaga
    14881 cagccacaaa ggccgcagca agttcaccgc caaactcgcc caatacaacg gcgcgaaact
    14941 cgaacaattc gacctgccgg acgaagccgc tcaagccgac gtgttgaaag aactcgaagg
    15001 caaagaggct gtcgttaccg ccattgaaaa gaaaaagcgc agccgcaacc ccgccgcgcc
    15061 gttcaccaca tccaccatgc agcaggatgc cgtgcgcaaa ctcggcttca ccaccgaccg
    15121 caccatgcgt accgcccagc agctttacga aggtatagac gtagggcagg gcgccatcgg
    15181 tctgattacc tatatgcgta ccgacagcgt gaatttggct gacgaagcgt taaccgaaat
    15241 ccgccattac attgaaaaca aaatcggcaa agaatatctg ccgagtgccg ccaaacaata
    15301 caaaaccaaa tccaaaaacg cccaagaagc ccatgaagcg atccgcccga cttccgtgta
    15361 ccgcacgccc gaaagcgtca aacccttcct gagtgcagac cagttcaaac tctatcaaat
    15421 gatttggcag cgtaccgttg cctgtcagat gacgcccgcc aaattcgacc aaaccaccgt
    15481 cgatattacc gtcggcaaag gcgtgttccg agtaaccgga caagtgcaaa ccttcgcagg
    15541 cttcctcagc gtttacgaag aaagcagcga cgatgaagag agcgaagacg gcaaaaaact
    15601 gcccgaaatg agcgaaggcg acaaattgcc ggtcgacaaa ctctacggcg aacaacactt
    15661 caccaccccg ccgccgcgct acaacgaagc cacactggtt aaagccctcg aagaatacgg
    15721 catcggccgc ccctcgacct acgccagcat catctccacg ctcaaagacc gcgaatacgt
    15781 tacccttgag caaaaacgct tcatgcccac cgacacaggc gacatcgtca ataaattcct
    15841 gaccgaacac ttcgcccaat acgtcgatta ccacttcacc gccaaactcg aagaccagct
    15901 tgacgaaatc gccgacggca aacgccaatg gatccctgtg atggacaaat tctggaaacc
    15961 gttcatcaaa caagtggaag aaaaagaggg catcgaacgc gccaaattta ccacgcagga
    16021 acttaacgaa acctgcccga aatgcggcga acacaagctg caaatcaagt tcggcaaaat
    16081 gggccgcttc gtcgcctgcg ccggctatcc cgaatgcagc tacacgcgca acgtcaacga
    16141 aaccgccgaa gaagccgccg agcgcatcgc caaagccgag gctgaacaag ccgaactcga
    16201 cggacgcgaa tgccccaaat gcggcggacg gttagcgtat aaatacagcc gtaccggcag
    16261 caaattcatc ggttgcgcca actaccccaa atgcaaacac gtcgagccgt tggaaaaacc
    16321 caaagataca ggcgtccaat gcccgcaatg caaaaaaggc aacctcgtcg agcgcaaatc
    16381 ccgctacggc aaactgtttt acagttgcag cacctatccc gactgcaact acgccacttg
    16441 gaacccgccc gtcgctgaag aatgcccgaa ctgccattgg ccggtcttga ccatcaaaac
    16501 caccaaacgc cggggtgtgg aaaaagtctg cccgcaaaaa gaatgcggct ggaaagaaca
    16561 aatcgaaccg cctgcaccgc aagagtgaag cggttgggat taagatgaaa gaaaatgccg
    16621 tctgaaaggg gtttcagacg gcatttgtaa attagaaggg gctgtcccag atggctgggg
    16681 aaatttaaat taagtcagaa ttatccctat gagaaaagcc gtccaagccg gtacaaacaa
    16741 aagaaaccca tcggactgtt tgccgcaggg gtaactgcaa gaacggcagc agggttggca
    16801 gcagttaatc aaaacacggc agcctgttat tttctatggc gaaatagtgt ttggcacatc
    16861 atcgggaaaa cttcctttac acgcatttgg acgaaatctg cgaaattatg gaggcatacg
    16921 acatatcgtt tacgattact tatccgtcaa aacagtccgc atttggaaat gtatgacggc
    16981 gaagcagggg cgggtgaaag ttatttccgt aaaggcagac gcggccgcag tgccgccggc
    17041 aaagccgccg tattcgggct tttgaagcgc aacggcaagg tttgtacggt tactgtcgga
    17101 cactcgaacc gctattttat tgcctattat ccgcggacgg gtgaaacccg gcagcattgt
    17161 ttatacggat tgttcgtagt tacgatgtat cagattgtaa gcggatttgg ccgtttccgt
    17221 atcaatcgcg gcacacattt tgccgaacgg caaaaccata tcaacgcaat tgggaacttt
    17281 tggaatcggg caaacgtcat ttgcgcaagt ttgacggcat tcccaaagag cattttgagc
    17341 cgtatttaaa ggagtgcgaa cggcgttttg acaacagtgg ggtaaaagtt cgaatttcca
    17401 ttttaaaaca attggtaaag caggatttat cccggttggc cgggatttta aaaaataaat
    17461 acattcttta acaaaacaaa tcatatcccg gcaaaacaaa tctgataaaa tgcttggcgt
    17521 ttattaacaa tctttttaat aatttaatct tagatatttg gag
//
LOCUS       DAXFZM010000047        17183 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.047, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000047 DAXFZM010000000
VERSION     DAXFZM010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 17183)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17183)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17183
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.047"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            430..1563
                     /locus_tag="ACFJAG_001261"
     CDS             430..1563
                     /locus_tag="ACFJAG_001261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980538.1"
                     /translation="MFKKFKPVLLSFFALVFAFWLGTGIAYEINPRWFLSDTATEVPE
                     NPNAFVAKLARLFRNADRAVVIVKESMRTEESLAETVDDGPLQSEKDYLALAIRLSRL
                     KEKAKWFHVTEQEHGEEVWLDYYIGEGGLVAVSLLQRSPEAFVNAEYLYRNDRPFSVN
                     VYGGTAHGENYETTGEYRVVWQPDGSVFDASGRGKIGEDVYEHCLGCYQMAQVYLAKY
                     RDVANDEQKVWDFREESNRIASDSRDYVFYQNMRELMPRGMKANSLVVGYDADGLPQK
                     VYWSFDNGKKRQSFEYYLKNGNLFIAQSSTVALKADGVTADMQTYHAQQTWYLDGGRI
                     IREEKQGDRLPDFPLNLEDLEKEVSRYAEAAARRSGGRRGLSH"
     gene            complement(2066..2341)
                     /locus_tag="ACFJAG_001262"
     CDS             complement(2066..2341)
                     /locus_tag="ACFJAG_001262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HFC3980539.1"
                     /translation="MNASNWSVYLILCENSAFYCGISPNPQQRLAIHTAGKGAKYTRV
                     FKPVAMRIVAGGMDKGTALKQEIAVKKLTAAQKRQLWEQGEKMPSET"
     gene            complement(2338..3621)
                     /locus_tag="ACFJAG_001263"
     CDS             complement(2338..3621)
                     /locus_tag="ACFJAG_001263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HFC3980540.1"
                     /translation="MTASKSGFIGQIFSRNMLVCIFTGFASGLPLYFLINLIPAWLRS
                     EQVDLKSIGLMALIGLPFTWKFLWSPLMDAVRLPVLGRRRGWMLLTQAGLLAALAAYA
                     FLNPRNHLPLIAGLSVLVAFFSASQDIVLDAFRREILSDEELGLGNSVHVNAYRVAAL
                     IPGSLSLVLADRMPWSEVFVITSLFMLPGLLMTLFLAHEPVLPPSVPKTLKQTVVEPF
                     KEFFMRKGIASAVCVLLFIFLYKLGDSMATALATPFYLDMGFSKTDIGLIAKNAGLWP
                     AVAAGILGGVWMLKIGVNKALWLFGAVQAITVLGFVWLAGFGHFDTVGTGERLMLAAV
                     IGAEAVGVGLGTAAFVSYMARETNPAFTATQLALFTSLSAVPRTVINSFAGYLIEWMG
                     YVPFFRLCFILALPGMLLLLKVAPWNGEKTQDAGR"
     gene            complement(3770..5188)
                     /gene="glnA"
                     /locus_tag="ACFJAG_001264"
     CDS             complement(3770..5188)
                     /gene="glnA"
                     /locus_tag="ACFJAG_001264"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HFC3980541.1"
                     /translation="MSIKNAVKLIEESEARFVDLRFTDTKGKQHHFTVPARIVLEDPE
                     EWFENGPAFDGSSIGGWKGIEASDMQLRPDASTAFVDPFYDDVTVVITCDVIDPADGQ
                     GYDRDPRSIARRAEAYLKSSGIGDTAYFGPEPEFFVFDGVEFETDMHKTRYEITSESG
                     AWASGLHMDGQNTGHRPAVKGGYAPVAPIDCGQDLRSAMVNILEGLGIEVEVHHSEVG
                     TGSQMEIGTRFATLVKRADQTQDMKYVIQNVAHNFGKTATFMPKPIMGDNGSGMHVHQ
                     SIWKDGQNLFAGDGYAGLSDTALYYIGGIIKHAKALNAITNPSTNSYKRLVPHFEAPT
                     KLAYSAKNRSASIRIPSVNSSKARRIEARFPDPTANPYLAFAALLMAGLDGIQNKIHP
                     GDPADKNLYDLPPEEDALVPTVCASLEEALAALKADHEFLLRGGVFSKDWIDSYIAFK
                     EEDVRRIRMAPHPLEFEMYYSL"
     gene            5499..6308
                     /gene="aroE"
                     /locus_tag="ACFJAG_001265"
     CDS             5499..6308
                     /gene="aroE"
                     /locus_tag="ACFJAG_001265"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004764 - shikimate 3-dehydrogenase
                     (NADP+) activity [Evidence IEA];
                     GO_process: GO:0019632 - shikimate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HFC3980542.1"
                     /translation="MHALPRYAVFGNPAAHSKSPQIHQQFALQEGVDIEYGRICADIG
                     GFAQAVSTFFETGGCGANVTVPFKQEAFHLADEHSDRALAAGAVNTLVWLEDGRIRGD
                     NTDGIGLANDITQVKNIAIEGKTILLLGAGGAVRGVIPVLKEHRPARIVIANRTRAKA
                     EELARLFGIEAVPMADVNGGFDIIINGTSGGLSGQLPAVSPKIFRDCRLAYDMVYGEA
                     AKPFLDFARQSGAKKTADGLGMLVGQAAASYALWRGFKPDIRPVIEHMKAL"
     gene            6311..7012
                     /gene="mtgA"
                     /locus_tag="ACFJAG_001266"
     CDS             6311..7012
                     /gene="mtgA"
                     /locus_tag="ACFJAG_001266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009274 - peptidoglycan-based cell wall
                     [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016763 - pentosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="monofunctional biosynthetic peptidoglycan
                     transglycosylase"
                     /protein_id="HFC3980543.1"
                     /translation="MFRIVKWLIALPVGIFIFFNAYVYGNIITYRAVAPHRTAFMSMR
                     MKQFEQEGRDVALDYRWVPYNRISTNLKKALIASEDVRFAGHGGFDWDGIQNAIRRNR
                     NSGEVKAGGSTISQQLAKNLFLNESRNYLRKGEEAAITAMMEAVTDKNRIFELYLNSI
                     EWHYGVFGAEAASRYFYKKPAADLTKQQAAKLTALVPAPLYYADHPKSKRLRNKTNIV
                     LRRMGSAELPESDTD"
     gene            complement(7286..7361)
                     /locus_tag="ACFJAG_001267"
     tRNA            complement(7286..7361)
                     /locus_tag="ACFJAG_001267"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(7326..7328),aa:Phe,seq:gaa)
     gene            complement(7552..8286)
                     /gene="lptB"
                     /locus_tag="ACFJAG_001268"
     CDS             complement(7552..8286)
                     /gene="lptB"
                     /locus_tag="ACFJAG_001268"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HFC3980544.1"
                     /translation="MSANNSRLVVQNLQKSFKKRQVVKSFSLEIESGEVIGLLGPNGA
                     GKTTGFYMIVGLIAADAGSVMLDGRELRHLPIHERARLGVGYLPQEASIFRKMTVEQN
                     IRAILEIRTKDKNQIDREIEKLLADLNIGHLRRNPAPSLSGGERRRVEIARVLAMKPR
                     FILLDEPFAGVDPIAVIDIQKIIGFLKSRGIGVLITDHNVRETLSICDRAYIISDGAV
                     LASGKPDDLVGNEQVRAVYLGENFKY"
     gene            complement(8357..8887)
                     /gene="lptA"
                     /locus_tag="ACFJAG_001269"
     CDS             complement(8357..8887)
                     /gene="lptA"
                     /locus_tag="ACFJAG_001269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_function: GO:0001530 - lipopolysaccharide binding
                     [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide transport periplasmic protein
                     LptA"
                     /protein_id="HFC3980545.1"
                     /translation="MIQKICKLFVLIVIFATSPAFALQSDSRRPIQIEADQGSLDQAN
                     QSTTFSGNVIIRQGTLNISASRVNVTRGGKGGESVRAEGSPVRFSQTLDGGKGTVRGQ
                     ANNVTYSSAGSTVVLTGNAKVQRGGDVAEGAVITYNTKTEVYTINGSTKSGAKSASKT
                     GRVSVVIQPSSTQKTE"
     gene            complement(8868..9449)
                     /gene="lptC"
                     /locus_tag="ACFJAG_001270"
     CDS             complement(8868..9449)
                     /gene="lptC"
                     /locus_tag="ACFJAG_001270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HFC3980546.1"
                     /translation="MKVRWRYGIAFPLILAVALGSLSAWLGRISEVEIEEVRLNPDEP
                     QYTMDGLDGRRFDEQGYLKEHLSAKGAKQFPENSDIHFDSPHLVFFQEGRLLYEVGSD
                     EAVYHTENKQVLFKNNVVLTKTADGRRQAGKVETEKLHVDTESQYAQTDTPVSFQYGA
                     SHGQAGGMTYNHKTGMLNFSSKVKAAIYDTKDM"
     gene            complement(9446..9982)
                     /locus_tag="ACFJAG_001271"
     CDS             complement(9446..9982)
                     /locus_tag="ACFJAG_001271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KdsC family phosphatase"
                     /protein_id="HFC3980547.1"
                     /translation="MQAISPELQARAAKIKLLILDVDGVLTDGRIFIRDDGEEIKSFH
                     TLDGHGLKMLQASGVQTAIITGRDAPSVGIRVKQLGINYYFKGISDKRAAYEELRAQA
                     GLEEAECAFVGDDVVDLPVMVRCGLPVAVPDAHWFTLQHAAYIAKRPGGAGAVREVCD
                     LIIRAKGTLGAALNGYIK"
     gene            complement(10048..11022)
                     /locus_tag="ACFJAG_001272"
     CDS             complement(10048..11022)
                     /locus_tag="ACFJAG_001272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HFC3980548.1"
                     /translation="MAENEKYLDWAREVLHTEAEGLREIAAELDENFVLAADALLHCK
                     GRVVITGMGKSGHIGRKMAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVAAISNSG
                     ESDEITAIIPALKRKDITLVCITARPDSTMARHADIHITASVSQEACPLGLAPTTSTT
                     AVMALGDALAVVLLRARAFTPDDFALIHPAGSLGKRLLLRVADIMHKGGGLPAVRLGT
                     PLKGAIVSMSEKGLGMLAVTDGQGCLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHP
                     KTISAERLATEALKVMQANHVNGLLVTDADGVLTGALNMHDLLAARIV"
     gene            11119..12174
                     /gene="tal"
                     /locus_tag="ACFJAG_001273"
     CDS             11119..12174
                     /gene="tal"
                     /locus_tag="ACFJAG_001273"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004801 - transaldolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HFC3980549.1"
                     /translation="MTILSDVKALGQQIWLDNLSRSLVQSGELAQMLKQGVCGVTSNP
                     AIFQKAFAGDALYADEVAALKRQNLSPKQRYETMAVADVRAACDVCLAEHESTGGKTG
                     FVSLEVSPELAKDAQGTVEEARRLHAAIARKNAMIKVPATDAGIDALETLVSDGISVN
                     LTLLFSRAQTLKAYAAYARGIAKRLAAGQSVAHIQVVASFFISRVDSALDATLPDRLK
                     GKTAIALAKAAYQDWEQYFTAPEFAALEAQGANRVQLLWASTGVKNPAYPDTLYVDSL
                     IGVHTVNTVPDATLKAFIDHGTAKATLTESADEARARLAEIAALGIDVETLAARLQED
                     GLKQFEEAFEKLLAPLV"
     gene            12186..12320
                     /locus_tag="ACFJAG_001274"
     CDS             12186..12320
                     /locus_tag="ACFJAG_001274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980550.1"
                     /translation="MPSERLSDGIALLTGHSAAYQGSALKILMGKKLMHDITRQHKRK
                     "
     gene            12325..12615
                     /locus_tag="ACFJAG_001275"
     CDS             12325..12615
                     /locus_tag="ACFJAG_001275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980551.1"
                     /translation="MAKALEIISPDEIYSDLIFKDPVPPHTIYTELMKLVGRNAGNER
                     IADRAFDFFSPALMDDSATEEQYNALYDLTLLEEPGMELDKDEITALINSLK"
     gene            12632..13519
                     /gene="gluQRS"
                     /locus_tag="ACFJAG_001276"
     CDS             12632..13519
                     /gene="gluQRS"
                     /locus_tag="ACFJAG_001276"
                     /EC_number="6.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA glutamyl-Q(34) synthetase GluQRS"
                     /protein_id="HFC3980552.1"
                     /translation="MYTGRFAPSPTGLLHIGSLLTAVASYADARSNGGKWLVRMEDLD
                     PPREMPGAASHILHTLEAFGFEWDGEVTYQSRRYALYEETLYRLKTAGLVYPCHCNRK
                     DWQAGARRGTDGFVYNGRCRHPGQRPALQGKQPSWRIRVPDRDIGFSDGIVGSYTQNL
                     ARDIGDFVLFRADGYWAYQLAVVADDAEQGVTHIVRGQDLLVSTPRQIYLQQCLGVPT
                     PQYAHLPLLTNAQGQKWSKQTLAPALDSNRREQLLRQVFRYLKLPEAPETDRPAELLD
                     WAVAHWDMDKVPKHAITAP"
     gene            complement(13589..14605)
                     /gene="dusA"
                     /locus_tag="ACFJAG_001277"
     CDS             complement(13589..14605)
                     /gene="dusA"
                     /locus_tag="ACFJAG_001277"
                     /EC_number="1.3.1.-"
                     /EC_number="1.3.1.91"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0002943 - tRNA dihydrouridine synthesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine(20/20a) synthase DusA"
                     /protein_id="HFC3980553.1"
                     /translation="MINKELIEHKGKRRLCVAPMLDWTDRHYRYLARQITRNAWLYSE
                     MVNAGAIVYGDKDRFLMFNEGEQPVALQLGGSDPSDLAKAAKAAEEYGYNEVNLNCGC
                     PSPRVQKGAFGACLMNEVGLVADCLNAMHDAVGIPVTVKHRIGVDRQTEYQTVADFVG
                     TLRDKTACKTFIVHARNAWLDGLSPKENRDVPPLKYDYVYRLKQEFPELEIIINGGIT
                     TNEAIAGHLQHVDGVMVGREAYHNPMVMREWDRLFYGDNRAPIEYADLVQRLYTYSQV
                     QIQAGRGTILRHIVRHSLGLMHGLKGARTWRRMLSDATLLKDNDGGLIFEAWKEVERA
                     NTRE"
     gene            14725..15879
                     /locus_tag="ACFJAG_001278"
     CDS             14725..15879
                     /locus_tag="ACFJAG_001278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HFC3980554.1"
                     /translation="MATITKRRNPSGETVYRVQVRVGKKGYPAFNESRTFSKKALAVE
                     WGKKREAEIEAGPELLFKRGKVKMMTLSEAMRKYLNETLGAGRSKKMGLRFLMEFPIG
                     GIGIDKLKRSDFAEHVMQRRRGIPELDIAPIAASTALQELQYIRSVLKHAFYVWGLEI
                     GWQELDFAANGLKRSNMVAKSAIRDRLPTTEELQTLTTYFLRQWQSRKSSIPMHLIMW
                     LAIYTSRRQDEICRLLFDDWHKNDCTRPVRDLKNPNGSTGNNKEFDILPMALPVIDEL
                     PEESVRKRMLANKGIADSLVPCNGKSVSAAWTRACKVLGIKDLRFHDLRHEAATRMAE
                     DGFTIPQMQRVTLHDGWNSLQRYVSVRKRSTRLDFKEAIMQAQSDIKSGK"
     gene            complement(15929..16195)
                     /locus_tag="ACFJAG_001279"
     CDS             complement(15929..16195)
                     /locus_tag="ACFJAG_001279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyocin activator PrtN family protein"
                     /protein_id="HFC3980555.1"
                     /translation="MNISKEQGLLIAYGGRPYIPPREVHKDFFAHIGFNAFKASGVRC
                     ELPFPIFRLSDSRKSEYFVSVRELAKAIADKEEKAKSEYRKFRS"
     gene            complement(16303..>17183)
                     /locus_tag="ACFJAG_001280"
     CDS             complement(16303..>17183)
                     /locus_tag="ACFJAG_001280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HFC3980556.1"
                     /translation="LRRLVAAKVRRYCGEHPGVFDGAAGSGQLEQYIEPSDFRAVEIQ
                     AEACKALLQNYPAAKVYNTSLFLYTDGEPQDCTVMNPPFSIKLKDLSEDEKSRIAQEY
                     PWKKSGVADEIFVLKGLENARRFGFFILFPGIAYRKSEQRFREIIGNRLAELNRIQNA
                     FEDTPIEVLLLVIDKDKTDGGCIRELYDCKTDTLLAADTWQIEPDLWQTVQEPAPPKE
                     KEDPVLLEHECRDAAAKRIARELRFSKMVNEIEGWPHAEFDGFCDRLCNLIQAEKYGK
                     KHYFPCSLPLFGGAAG"
BASE COUNT         3940 a         4589 c         4632 g         4022 t
ORIGIN      
        1 gaaagaagaa agttttggtt tttttgaaaa gaaatattat aaggcttata ttttcttttt
       61 tagcgattct gtaatagaag ttatcagctc gacagaacct gtattttatt caaaataaca
      121 aattatcaaa caaagctctg attaaaaacc caacaatcaa aatgccatct gaagcggtat
      181 tcggctttca gacggcattt tctccgatta gtacaggatg caggggcttg ccggcttgat
      241 tttgccgaag ttgttggcac gcaatttgga gggggcgaca acctatgaaa aataaatcgt
      301 taaggatatt tttagtttta cccaatttgt ttccgaaaaa gtacggcagc aaccgtagat
      361 tagattaaaa atcaaacaat caaagcccgc ctgatataat cgatatatcc tgttaaacga
      421 aaaataaata tgtttaaaaa attcaaaccg gtattgttgt cattttttgc acttgtattt
      481 gccttttggc tgggaacggg cattgcctat gagattaatc cgcgttggtt tttgagcgat
      541 acggcaactg aagtacctga aaatccgaat gcttttgtgg cgaaacttgc ccgcctgttc
      601 cgaaatgccg acagggcggt tgtcatcgtg aaggaatcga tgaggacgga ggaaagcctt
      661 gccgaaactg tggatgacgg tccgttgcag tcggagaagg attatctcgc gctcgctatc
      721 cggctcagtc gtttgaaaga aaaggcgaaa tggtttcacg taacggagca ggaacatggg
      781 gaagaggtct ggctggatta ctatatcggc gagggcggtt tggttgcggt ttcgcttttg
      841 caacgctcgc cggaagcgtt tgttaatgcc gaatatctgt atcggaacga tcgtccgttt
      901 tctgtaaatg tgtacggcgg aacggctcac ggggaaaatt atgaaacgac aggagaatat
      961 cgggttgttt ggcaaccgga cggttcggta tttgatgcgt cggggcgcgg gaaaatcggg
     1021 gaagatgttt atgagcattg cctcgggtgt tatcagatgg cccaggtata tttggcgaaa
     1081 taccgggatg tcgcgaatga cgagcagaag gtttgggact tccgcgaaga gagcaaccgg
     1141 attgcgtcgg actcgcgcga ttatgtgttt tatcagaata tgcgggaatt gatgccccgg
     1201 gggatgaagg cgaacagtct tgtggtcggc tatgatgcgg acggtctgcc gcaaaaagtc
     1261 tattggagtt tcgacaatgg aaaaaaacgc cagagtttcg aatattattt gaaaaacgga
     1321 aatcttttta ttgcacaatc ttcgacggta gcattgaaag cggatggcgt aacggcggat
     1381 atgcagacct atcatgcgca acagacgtgg tatttggatg gcgggcggat tatccgcgaa
     1441 gagaaacagg gagacagact gcctgatttt cctttgaact tggaagattt ggaaaaagag
     1501 gtgagccgtt atgcagaggc tgcggcgaga cgttcgggcg gcaggcgcgg cctttctcac
     1561 tgaacgcaaa taccgtctga aaccggtttt cagacggcat tggagagtca aacgcttttt
     1621 gcaatgccgt atatgccgaa cccggttcgc tacaaattga aaaccacaat ccaaaaaacg
     1681 gaaatacaca ttatcaaaca aacaaataag ttgacatatt gtgcgatatt gagggctgta
     1741 ccgtattttc ccgttcttta tatgagcggc aggcatcctc ataaaagaag ggataccgat
     1801 aaggaaaaat ccctcggtat aaaaaatata ctgattaatc aatacaaatc caacaaacag
     1861 ttcatcattt tcttttctgt tggcgtataa aaaccgctcg gaaaaaaata aaatatcaaa
     1921 acggcaaaat aaaaatactg atatatgcct tcactttcat agggcgacgc tctatgtgcc
     1981 gtcctgtgcg ttgaaacatc ggttttcctt gccgcctgtc ccgcttttcc ctgattgctg
     2041 ccaactgccg tccgaacctg aaccgtcagg tttcagacgg cattttttct ccctgttccc
     2101 acaattgccg tttttgtgcg gcggtcagtt ttttgacggc gatttcctgt ttgagcgcag
     2161 tgcctttatc catgccgcct gcaacgatac gcatcgccac cggtttgaat acgcgggtat
     2221 atttcgcgcc ttttccggct gtgtggatgg caagccgctg ttgcggattc gggctgatac
     2281 cgcaatagaa cgcgctgttt tcacacaata tcaggtaaac gctccagttt gacgcgttca
     2341 tctgcctgca tcctgggttt tttccccgtt ccaaggcgca actttcagca gcagcagcat
     2401 acccggcagg gcaagtatga aacacagccg gaaaaacggt acataaccca tccattcgat
     2461 cagatagcct gcaaaggaat tgatgaccgt gcgcggcacg gcggacaggc tggtaaacag
     2521 tgcgagctgc gttgccgtaa acgcgggatt ggtctcgcgc gccatatacg atacaaacgc
     2581 cgccgtcccc aaccccacgc cgaccgcttc cgcgccgata actgccgcca gcatcagcct
     2641 ctcgcctgtg ccgaccgtgt cgaaatgtcc gaaccctgcc agccatacaa accccaaaac
     2701 cgttattgcc tgcaccgcgc cgaatagcca caaggctttg tttacgccga ttttcagcat
     2761 ccacacgccg cccaagatac ctgccgccac tgccggccac agtcctgcat ttttggcaat
     2821 caaaccgatg tcggtcttgc tgaaacccat atccagataa aacggcgttg ccaacgcggt
     2881 tgccatactg tcgccgagtt tgtaaaggaa gataaacagc agcacgcaca ccgccgaagc
     2941 gatgcccttg cgcataaaaa attctttaaa cggctctacc acggtctgct tcaacgtttt
     3001 aggaacggaa ggcggcaaca cgggttcgtg cgcgagaaac agcgtcatca gaaggccggg
     3061 cagcataaat aatgaagtga taacaaatac ttctgaccac ggcatcctgt ctgccaacac
     3121 caaactcaat gaaccgggaa tcagggcggc aacccggtag gcgttcacat gaaccgagtt
     3181 gcccaaaccc aattcttcgt ccgacaaaat ctcgcgcctg aacgcatcca atacaatgtc
     3241 ctgactggcg gaaaaaaaag cgacaagcac cgacaagccg gcaatcaacg gcagatgatt
     3301 ccgggggttt aaaaaggcat atgccgccaa agccgccagt aaccctgcct gcgtcagcag
     3361 catccacccg cgccgccgtc ccaaaacggg cagcctgacc gcgtccatca gcggcgacca
     3421 caaaaatttc caagtaaacg gcagaccgat caacgccatc agcccgatgc tcttcaaatc
     3481 cacctgctcg ctgcgcaacc acgccggaat caggttaatc agaaagtaca gcggcagccc
     3541 cgaggcaaac cccgtaaaaa tacagacaag catattgcgg gaaaagattt gcccgataaa
     3601 acctgatttc gatgcagtca tcgttcgtac agccaaaaaa caaaagccta ttgtagcaaa
     3661 tatcgcccgc ctgctgaaaa atgccgccac gcgccgccgg tttgccgttc caatgcaaaa
     3721 tgccgtctga aactgtgttc agacggcatt gctactgaaa cccgacggtt tacaggctgt
     3781 aatacatttc aaattccagc gggtgcggcg ccatacggat gcggcggaca tcttcctctt
     3841 taaaggcgat gtagctgtcg atccagtctt tgctgaacac gccgccgcgc agcaggaatt
     3901 cgtggtcggc cttgagggcg gcaagtgctt cttccaaaga agcgcagacg gtcgggacga
     3961 gcgcgtcttc ttccggcggc aggtcgtaca ggtttttatc ggcagggtcg cccggatgga
     4021 ttttgttttg aatgccgtcc aaaccggcca tcagcagggc ggcaaatgcc aaatacgggt
     4081 tggcggtcgg gtcggggaaa cgcgcttcga tgcggcgcgc cttgctgctg ttcacagacg
     4141 ggatacggat ggaagcggaa cggtttttgg cggaataggc caatttggtc ggtgcttcaa
     4201 agtgcggcac gaggcgtttg taggagttgg tggacggatt ggtaatcgcg ttcagggctt
     4261 tggcgtgttt gatgatgccg ccgatgtagt agagcgcggt atcggacaaa ccggcatagc
     4321 cgtcgcctgc gaacaggttt tgaccgtctt tccaaatgga ttggtggacg tgcataccgc
     4381 tgccgttgtc gcccataatc ggtttgggca taaaggtggc ggttttgccg aaattgtggg
     4441 caacgttttg gatgacgtat ttcatatctt gggtttggtc ggcgcgtttg accaaagtgg
     4501 cgaaacgggt gccgatttcc atttggctgc cggtaccgac ttcgctgtgg tggacttcga
     4561 cttcgatgcc gagtccttcc aaaatgttca ccatggcgga gcgcaaatct tgaccgcagt
     4621 caatcggcgc gacgggcgcg tagccgcctt tgacggcggg gcggtggccg gtgttttgac
     4681 cgtccatatg caggccgctt gcccacgcgc cgctttcgga cgtgatttcg taacgggttt
     4741 tgtgcatgtc ggtttcaaat tctacgccgt cgaagacgaa gaattcgggt tcggggccga
     4801 aataggcggt gtcgccgata ccggaagatt tcaaataggc ttcggcgcgg cgtgcgatgg
     4861 agcgcgggtc gcggtcgtaa ccctgaccgt cggcagggtc gatgacgtcg caggtaatga
     4921 cgacggtaac atcatcataa aaaggatcga cgaaggctgt ggacgcatcg ggacgcagct
     4981 gcatatcgga agcctcaatg cctttccagc cgccgatgga cgagccgtca aacgccggtc
     5041 cgttttcaaa ccactcttcg gggtcttcca acacgatgcg cgcaggcacg gtaaagtggt
     5101 gctgcttgcc tttggtatcg gtgaagcgca aatcgacaaa gcgggcttcg ctttcttcaa
     5161 tcaattttac ggcgttttta atggacatct tcagctcctg aaaaagggaa atggcaaaat
     5221 atgcggaacg cggcggcttg acgcaaagtc ggcacgattt taccacgccg atgccgtctg
     5281 aaaccggttt tgcgtcaaat tccaagccgg aaaatatagt ttcaaacggc aagattgtca
     5341 acaatatgct tcggtttgtc tgttcaaaag cggaatgccc gcccttttgt ccgaatgccg
     5401 acaaaacaga tgccgtctga aggcggtttc agacggcatc gttcccatct tcgcgccgcc
     5461 gttataaaat gaccgccccg cctttatgga atatgactat gcacgccctc ccccgctacg
     5521 ccgttttcgg caaccccgcc gcccacagca aatcgccgca gattcatcag caatttgccc
     5581 ttcaggaagg cgttgacatc gaatacggac gcatttgcgc cgacatcggc ggtttcgcgc
     5641 aggcggtttc gacatttttt gaaacaggcg gttgcggggc aaacgttacc gtaccgttca
     5701 aacaggaagc gtttcatctg gcggacgaac attccgaccg cgctttggct gccggtgcgg
     5761 tcaatacgct ggtgtggttg gaagacggca gaatacgcgg cgacaatacc gacggtatcg
     5821 gtttggccaa cgacatcacg caggtcaaaa acattgccat cgagggcaaa accatcttgc
     5881 ttttgggcgc gggcggcgcg gtgcgcggcg tgattccggt tttgaaagaa caccgccctg
     5941 cccgtatcgt cattgccaac cgtacccgcg ccaaagccga ggaattggcg cggcttttcg
     6001 gcattgaagc cgtcccgatg gcggatgtga acggcggttt cgatatcatc atcaacggca
     6061 cgtccggcgg cttgagcggt cagcttcctg ccgtcagccc taaaattttc cgcgactgcc
     6121 gccttgccta cgatatggtt tacggcgaag cggcaaaacc gtttttagat tttgcacgac
     6181 aatcgggtgc gaaaaaaact gccgacggac tgggtatgct agtcggtcag gcggcggctt
     6241 cctacgccct ctggcgcggt ttcaaaccgg acatccgccc cgtcatcgaa cacatgaaag
     6301 ccctgtaacc atgttccgca tcgtcaaatg gctgattgcc ctgcccgtcg gcatctttat
     6361 ctttttcaat gcctatgtgt acggcaacat catcacctac cgcgccgtcg cgccccatcg
     6421 gactgccttt atgtcgatgc ggatgaagca gtttgaacaa gaaggtcgcg atgtcgcact
     6481 ggattaccgc tgggtgccct acaaccgcat ttccaccaac ctgaaaaaag ccctgattgc
     6541 ttccgaagat gtccgttttg ccggacacgg cggcttcgat tgggacggca ttcaaaacgc
     6601 catcaggcgc aaccggaaca gcggcgaagt gaaggcgggc ggatcgacca tcagccagca
     6661 gcttgccaaa aacctcttcc tcaacgaaag ccgcaactat ctgcgcaaag gggaagaggc
     6721 ggccattacg gcaatgatgg aagctgttac cgacaaaaac aggattttcg aactgtattt
     6781 aaactcaatc gaatggcact acggcgtttt cggcgcggaa gctgcgtccc ggtattttta
     6841 taaaaaaccg gccgcagacc tgaccaaaca gcaggcggcg aaactgacgg cactcgtccc
     6901 cgccccgctc tactacgctg accatccgaa aagcaaacgg ctgcgcaaca aaaccaatat
     6961 cgtgctcaga cgcatgggtt cggcagaatt acccgaaagc gatacggact gattgtttca
     7021 gatatggaaa tgccgtctga actgcggttc ggacggcata tgttttctgg ttcttatagt
     7081 ggattaaatt taaaccggta cggcgttacc ccgccttgcc gtactatgtt gtactgtctg
     7141 cgacttcgtc gctttgtcct gatttttgtt aatccactaa cctgcccgac agccgcaaag
     7201 accgtatcgt gcatggcagg tatttgcggt gcgggactgc tgccgaaaac ggcaggcaaa
     7261 aaataaccgc ttataagcgg ttttttggtg accagaggcg gaatcgaacc gccgacacac
     7321 ggattttcaa tccgttgctc taccaactga gctatctggc ctgtatctgt ctcgttaaga
     7381 ggtgcgtatt aaaccaaatt tcgggacgac acgcaagcgg atttgtcgat attttttacc
     7441 cagccgacta agtcgatgtt ttaagtttaa attaatttca cagaaaaata gtgcaaatcg
     7501 gttttttgcc gttcgttcgg cgatgttctg ctttgcagac ggcaaaacgc ttcaatattt
     7561 gaagttctcg cccaaataga cggcgcgcac ctgttcgttg ccgaccaaat cgtcgggctt
     7621 gccggaagcc agcaccgcac cgtctgaaat gatgtaggcg cggtcgcaga tgctgagggt
     7681 ctcgcggacg ttgtggtcgg taatcaatac gccgatgccg cgcgatttga ggaaaccgat
     7741 gattttctgg atgtcgatga cggcgatggg atcgacgccg gcaaaaggtt cgtccaaaag
     7801 gatgaaacgt ggtttcatgg cgaggacacg ggcgatttcg acgcgccgcc gttcgccgcc
     7861 ggacagcgac ggcgcaggat tgcggcgcaa gtgtccgata ttgaggtcgg cgagcagttt
     7921 ttcgatttct ctgtcgattt gatttttatc tttggttctg atttccaaga tggcgcggat
     7981 gttttgttcg acggtcattt tgcggaatat cgaggcttcc tgcggcaggt agccgacacc
     8041 caggcgggcg cgttcgtgta tgggcaggtg gcgcaattcc cgcccgtcca gcatcacgct
     8101 gcctgcgtcg gcagcgatga gcccgactat catgtagaag ccggtggttt tgcctgcgcc
     8161 gttgggcccg agcagtccga tgacttcgcc gctttcgatc tcaagggaga aacttttgac
     8221 gacttggcgt tttttgaaac ttttctgcag gttttggacg acgaggcggc tgttgtttgc
     8281 gctcataaat ctcttctcgg catttcggtc ggcaaatgcc gtctgaactg cgtttccgtt
     8341 tcagacggca tcggggttat tcggtttttt gtgtgcttga aggctggatg acgacgctga
     8401 ccctgccggt tttggaagcg gatttcgcac ccgatttcgt gctgccgttg atggtataga
     8461 cttcggtttt ggtgttgtag gtaatgaccg caccttcggc aacgtcgccg ccgcgctgca
     8521 ctttggcatt gccggtcaga acgacggtgc ttcctgcgga ggaataggta acgttgtttg
     8581 cctgaccgcg caccgtccct ttgcccccgt ccaacgtttg gctgaagcgg acgggcgaac
     8641 cttccgccct cacggattcg ccgcctttgc cgccgcgtgt gacgttgacg cgcgaggcgg
     8701 aaatgttgag cgtaccctgt ctgatgatga cattgccgct aaatgtggta ctttggttgg
     8761 cttgatcgag cgaaccttgg tcggcttcga tttggatggg ccgtctgctg tcgctttgaa
     8821 gggcaaaagc gggagaagtt gcaaaaatta caattaaaac aaatagctta catatctttt
     8881 gtatcataaa tcgcggcttt cactttagat gagaagttca acatgcctgt tttgtggttg
     8941 taggtcatac cgcccgcctg accgtgcgac gcgccatatt ggaaactgac aggcgtatcg
     9001 gtttgggcat attgagattc ggtatcgacg tgcagttttt cggtttcgac tttacccgcc
     9061 tgccgcctgc cgtcggcggt tttggtcagc acaacgttgt ttttaaaaag aacctgtttg
     9121 ttttcggtat ggtaaacggc ttcatcgctg ccgacttcgt acaacagcct gccttcttgg
     9181 aagaacacga gatgcggcga atcaaaatgg atgtcgctgt tttcgggaaa ctgtttcgca
     9241 cctttcgcgc tcaaatgttc tttcaagtat ccctgttcgt caaaccgcct tccgtccaag
     9301 ccgtccattg tgtattgagg ttcgtcggga ttgagcctga cttcctcgat ttcgacttcg
     9361 ctgatacggc ccaaccatgc cgacaggctg cccaaggcaa ccgccaatat caatgggaac
     9421 gcaattccgt accgccatct tactttcatt tgatgtaccc gttcaaagcc gcgcccaacg
     9481 tacctttcgc gcggataatc aggtcacaca cttcgcgcac cgcgcccgca ccgccggggc
     9541 gtttggcaat ataggcggcg tgttgcagcg taaaccaatg cgcgtcgggg acggcaaccg
     9601 gcaatccgca gcgcaccatc accggcaaat cgaccacgtc gtcgccgaca aaggcgcact
     9661 cggcttcttc caagcctgcc tgcgcgcgca gctcttcata cgcggcgcgt ttgtccgaaa
     9721 tgcctttgaa gtagtaattt atgcccaact gtttgacgcg gatgccgacg gagggcgcgt
     9781 cccgacctgt gataatcgca gtctgcacgc cgcttgcctg aagcattttc aggccgtgtc
     9841 cgtccagtgt gtgaaacgat ttgatttctt cgccgtcgtc gcggataaag atgcgcccgt
     9901 cggtcaaaac gccgtccaca tccaatatca gcagtttgat tttggcggcg cgtgcctgta
     9961 attcgggaga aattgcctgc attgggattt ccttgttttc agacggcata tcttaccaca
    10021 aatgccgtct gaaacggctg caacgcctta tacaatccgc gccgccaaaa ggtcgtgcat
    10081 attcagcgca cctgtcagca cgccgtctgc atcggtaacc agaagcccgt tcacatggtt
    10141 tgcctgcatg actttcaggg cttcggtggc gaggcgttcg gcggagatgg ttttagggtg
    10201 tgtatgcatg acttcgtcta tcgaaagacc ggtaaaattg tcgcattctt gaaacaggcg
    10261 gcgcaaatcg ccgtcagtaa acacgccttt cagacagcct tgcccgtccg ttaccgccaa
    10321 catgcccaaa cctttctcgc tcatgctgac gatggctcct ttcaagggcg tgccgagtcg
    10381 gacggcgggc aggccgccgc ctttgtgcat aatgtcggca acgcgcaaaa gcaggcgttt
    10441 gccgaggctg ccggcagggt ggatcaaggc gaagtcgtcg ggcgtgaacg cgcgggcgcg
    10501 cagcaggacg accgccaacg cgtcgcccaa agccataacg gcggtggtgc tggtggtcgg
    10561 ggcaagcccc aacgggcagg cttcttgcga aaccgatgcg gtgatgtgga tatcggcatg
    10621 gcgcgccatg gttgaatcgg ggcgggcggt gatgcagacg agggtaatgt ctttgcgttt
    10681 gagcgcgggg atgatggcgg tgatttcgtc gctttcgccg gaattggaaa tggcggcgac
    10741 gacgtcgttg tccacaatca tgcccaaatc gccgtgtgcc gcttccgcag ggtggacgaa
    10801 aaacgcgggc gtgccggtcg aggccatggt tgccgccatt ttgcgcccga tatgtccgga
    10861 cttgcccata cccgtgatga cgaccctgcc cttgcagtgc aacaacgcgt ctgccgcaag
    10921 gacgaagttt tcgtccaatt ccgccgcaat ttcgcgcaag ccttccgctt cggtgtgcaa
    10981 cacttcgcgc gcccagtcga gatatttttc gttttctgcc attgccatcc gcctttgctg
    11041 taacaaaact acccaaaatt tccgaatcgg ggtagcataa gccttcaaac cccgcccatc
    11101 catccaaagg aatcaaaaat gactatttta tcggacgtta aagcattagg acaacaaatc
    11161 tggctggaca acctttcccg ctcgctcgtg caaagcggcg aattggcgca aatgctcaaa
    11221 caaggcgtgt gcggcgtaac ttccaatccc gccattttcc aaaaagcctt cgccggcgac
    11281 gcgctttatg ccgacgaggt cgccgccctc aagcggcaaa acctcagccc caaacaacgc
    11341 tacgaaacca tggcggttgc cgacgtacgg gcagcctgcg acgtttgcct tgccgaacac
    11401 gaatccaccg gcggcaaaac cggtttcgtc agtctcgaag tttctcccga acttgccaaa
    11461 gacgctcaag gcacggtaga agaagcccgc cgcctccatg ccgccatcgc gcgtaaaaac
    11521 gccatgatta aagtgcctgc caccgacgca ggcatcgatg cgctcgaaac cctcgtttca
    11581 gacggcatca gcgtgaacct gaccctgctg ttctcacgcg cccaaaccct caaagcctac
    11641 gccgcctacg cgcgcggcat tgccaaacgc ttggcagccg gacaaagcgt tgcccatatc
    11701 caagttgtcg ccagcttctt catctcgcgc gtggacagtg cgctggatgc aacgctgccc
    11761 gaccggctca aaggcaaaac cgccatcgcc cttgccaaag ccgcctatca agattgggaa
    11821 caatatttca ccgcccccga atttgccgca ctggaagccc aaggcgcaaa ccgcgtgcag
    11881 cttttatggg catctaccgg cgtgaaaaac ccagcctatc ccgacacgct ctacgttgac
    11941 agcctgatcg gcgtgcacac cgtcaacacc gtccccgatg ccacgctcaa agcctttatc
    12001 gaccacggca cggcgaaagc gacgctgacc gaaagcgcgg acgaagcacg ggcgcggctc
    12061 gccgaaattg ccgcgctcgg catcgatgtc gaaaccttgg cggcgcgttt gcaggaagac
    12121 ggtttgaaac agtttgaaga agcctttgaa aaactgctcg cgcctttggt ttaggcattt
    12181 ccccgatgcc gtctgaaagg ctttcagacg gcatcgccct tttgaccgga cacagtgcgg
    12241 catatcaagg atccgcccta aaaatattaa tgggcaagaa gttaatgcac gacattaccc
    12301 gccaacacaa aaggaaatag aatcatggca aaagcactcg aaatcatttc acccgatgaa
    12361 atttattcag atctgatttt taaggatccg gtacctcccc atactatata tacagaattg
    12421 atgaaactgg ttggtagaaa tgcaggcaat gagagaattg cagatagagc cttcgatttt
    12481 ttctcgcctg ctcttatgga tgattcagct accgaagagc aatataatgc cctatatgat
    12541 ttaaccttgc ttgaagagcc cgggatggaa ctggataaag atgagataac ggctttgatt
    12601 aatagtctta aataaagggg ctgtaccgga tatgtacaca ggacgcttcg cccccagccc
    12661 gaccgggttg ctccacatcg gctctctgct gaccgccgtc gcttcctatg ccgatgcacg
    12721 ttcaaacggc ggcaaatggc tggtccgtat ggaagacctc gatccgccgc gcgaaatgcc
    12781 gggggcggca agccatatcc tgcacacgct cgaggcattc ggattcgagt gggacggcga
    12841 agtcacctat cagagccgcc gttacgccct gtatgaagaa accctatacc gtctgaaaac
    12901 cgccggactg gtctatccct gccattgcaa ccgcaaagac tggcaggccg gggcaaggcg
    12961 gggcacagac gggttcgtct ataacggacg ctgccgccac cccggccaac gccctgcact
    13021 gcaaggcaaa cagccgtcgt ggcgcatccg cgtccccgac cgcgacatcg gcttttcaga
    13081 cggcatcgtc ggcagttaca cccaaaacct cgcccgcgac atcggcgatt tcgtcctgtt
    13141 ccgtgcagac ggttactggg cataccagct cgccgtcgtt gccgacgatg ccgaacaggg
    13201 cgttacccac atcgtgcgcg gacaagacct gctcgtttcc acaccgcgcc aaatctattt
    13261 gcagcagtgt ttgggcgttc cgacaccgca atatgcccac ctgccgctgc tgaccaacgc
    13321 gcaagggcag aaatggtcga agcagacgct cgcccccgca ttggattcaa accgccgcga
    13381 acaacttctc cgccaagtgt tccgctacct caagctgccc gaagcaccgg aaaccgaccg
    13441 ccctgccgaa ttgctcgact gggcggtggc acactgggat atggacaaag tgccgaaaca
    13501 cgccattacc gccccctaaa caccacccga caaacgcaca aatgccgtct gaaaccttca
    13561 gacggcattt cacacataca gccccgccct attcgcgcgt atttgcccgt tcgacttctt
    13621 tccacgcttc gaaaatcagg ccgccgtcgt tgtctttcaa gagcgttgca tcggaaagca
    13681 tacgccgcca agtccgcgcg cctttcaaac cgtgcatcag cccgaggctg tggcggacga
    13741 tgtggcgcag gattgtgccg cgtccggctt ggatttggac ttggctgtat gtgtagaggc
    13801 gctgcaccaa atcggcgtat tcgatcgggg cgcggttgtc accgtaaaac agcctgtccc
    13861 attcgcgcat caccatcggg ttgtggtatg cctcgcgccc gaccatcacg ccgtcaacgt
    13921 gttgcaagtg tccggcgatt gcttcgttgg tggtgatgcc gccgttgatg atgatttcca
    13981 gctcgggaaa ctcctgcttg aggcggtaaa cgtaatcgta tttcaagggc ggaacatcgc
    14041 ggttttcttt gggcgaaaga ccgtccagcc aagcgttgcg ggcgtggacg atgaaggttt
    14101 tgcaggcggt tttgtcgcgc agcgtgccga cgaaatcggc aacggtttgg tattcggtct
    14161 gcctgtccac accgatgcgg tgtttgacgg taacggggat gccgaccgcg tcgtgcatgg
    14221 cgttgaggca gtcggcaacc agcccgactt cgttcatcag acacgcgccg aacgcgcctt
    14281 tctgcacgcg cggactggga cagccgcagt tgaggttgac ctcgttgtag ccgtattctt
    14341 cggcggcttt ggcggctttc gccaaatcgg acggatcgct gccgcccagt tgcagggcga
    14401 cgggctgctc gccttcgtta aacatcaaaa aacggtcttt gtcgccgtaa acaatcgcgc
    14461 cggcgttgac catttcgctg tacagccaag catttcgggt aatctggcgg gcaaggtaac
    14521 ggtagtgcct gtccgtccag tcgagcatcg gggcgacgca taaacgcctt ttccctttat
    14581 gttcaataag ttccttgttt atcataaggt tttcacattc ttttaactca aacattcttt
    14641 attatttgct tggatttttg cccatttcac tatatttgac gtaccatact tgcaccataa
    14701 tttttaattc ttggaatggt gcaaatggca acaataacca agcggcgcaa tccttccggc
    14761 gaaacagtat atcgggttca ggtacgggtc ggcaagaaag gctatcctgc tttcaatgag
    14821 agcaggacgt tcagtaaaaa ggctttggcg gtcgaatggg ggaagaaacg ggaggcggaa
    14881 atcgaagccg gcccagaact gcttttcaag cgcggcaagg tcaagatgat gacgctgtcc
    14941 gaagctatgc ggaagtatct taacgaaacg cttggagcgg gtcggtcaaa gaaaatgggc
    15001 ttgcgttttc tgatggagtt cccgattggc ggcatcggca tcgataagct gaaacggtct
    15061 gatttcgcgg aacacgttat gcagaggcgg cgcggaatcc ccgaactgga cattgcgcca
    15121 atcgcggctt ctacggcatt gcaggagctg caatatatcc gttccgtgct aaaacacgcc
    15181 ttttatgtgt gggggcttga aataggctgg caggaattgg atttcgcggc aaacgggctg
    15241 aaacgctcga atatggttgc gaaatctgca atcagggaca gattgccgac cacggaagaa
    15301 ctgcaaaccc tgacaactta tttcctgcgg caatggcaaa gcaggaaatc ttccataccg
    15361 atgcacctga ttatgtggct ggcgatttat acgtcaaggc ggcaggatga gatttgccgc
    15421 ctgctgtttg acgactggca caaaaatgat tgtacccggc cggttcgtga tttaaaaaat
    15481 ccgaacggca gcacagggaa taataaggag tttgatattc tgcctatggc tttgccggtc
    15541 attgacgagc tgccggagga atcggtcagg aagcgtatgc ttgccaacaa aggcatcgcc
    15601 gacagccttg taccgtgcaa cggaaaatcg gtttccgccg cttggacgag ggcgtgcaag
    15661 gttcttggaa ttaaagactt gcgcttccac gatttacggc acgaggctgc tacccgtatg
    15721 gctgaagacg gcttcacgat tccgcaaatg caacgggtaa cgctgcatga cggttggaac
    15781 agcctgcaga ggtatgtgag cgtacgcaaa cgctcgacgc ggctggattt taaagaggca
    15841 ataatgcagg cgcaaagcga tataaaatcc gggaagtgat attaaattaa aggggatgtg
    15901 ccgcatcccc tgattcctcc gtcttgcatc aagaccggaa tttccgatat tccgattttg
    15961 ccttttcctc cttgtctgcg attgcctttg caagctctcg gacgctgacg aaatattccg
    16021 attttcggct gtcggacaat cggaaaatcg gaaacggaag ctcgcaccgt acccccgatg
    16081 ctttaaacgc gttaaagccg atatgggcaa aaaagtcttt gtgtacttcc ctcggcggga
    16141 tatacgggcg gccgccgtat gcgattaaaa gcccttgttc tttactgatg ttcatatata
    16201 cctctttctg ttaattctgc tttgtctgag tttccgcttt tttacggctt ggcggatgtt
    16261 cagcctgcgt cggtgcataa gtcctcctgt tcgggcggtt attcagccgg ccgcccctcc
    16321 gaaaagtggc aggctgcacg ggaagtagtg tttttttccg tatttctctg cctgtatcag
    16381 gttgcacagg cggtcgcaaa agccgtcaaa ttcggcatgc ggccagcctt ctatctcgtt
    16441 gaccattttg ctgaacctca attcccgggc aatccgcttt gccgctgcgt cacggcattc
    16501 gtgttccaag aggacggggt cttccttttc cttcggcggt gcaggttctt gcacggtttg
    16561 ccacaagtcc ggttcgattt gccaagtgtc ggcggcaagc agggtgtctg ttttgcagtc
    16621 gtacagttcg cggatgcagc cgccgtcggt tttgtctttg tcgataacca gtaaaagcac
    16681 ttcgatcggc gtgtcttcaa acgcgttttg tatgcggttg agttctgcca gccggttgcc
    16741 gatgatttcg cggaatcgct gctcgctttt gcggtaggcg atgccgggga acaggatgaa
    16801 gaatccgaag cggcgggcgt tttccaatcc ttttaaaacg aagatttcat cggctacgcc
    16861 cgatttcttc cacgggtatt cctgtgcgat acggcttttt tcgtcttcgc tcaaatcctt
    16921 tagcttgatg gaaaacggcg gattcatgac ggtgcagtct tgcggttcgc cgtcggtata
    16981 aaggaaaagg cttgtgttgt atactttggc ggcagggtag ttttgcaaca aggctttgca
    17041 cgcttccgcc tgtatctcta cggcgcggaa atcggacggt tcgatgtact gctccagctg
    17101 cccgcttcct gccgcgccgt caaatacgcc cgggtgttcg ccgcagtatc ggcggacttt
    17161 ggcggcaacc agccgcctca agc
//
LOCUS       DAXFZM010000048        17016 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.048, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000048 DAXFZM010000000
VERSION     DAXFZM010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 17016)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17016)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17016
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.048"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            332..976
                     /gene="rplC"
                     /locus_tag="ACFJAG_001281"
     CDS             332..976
                     /gene="rplC"
                     /locus_tag="ACFJAG_001281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HFC3980557.1"
                     /translation="MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTD
                     GYTAVQVTFGQKKANRVNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVS
                     MFEVGQLVDVTGTSKGKGFSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFP
                     GKRMAGQYGNTKATVQKLEVVRVDAERQLLLVKGAVPGAVNSDVVVRPSVKVGA"
     gene            976..1596
                     /gene="rplD"
                     /locus_tag="ACFJAG_001282"
     CDS             976..1596
                     /gene="rplD"
                     /locus_tag="ACFJAG_001282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HFC3980558.1"
                     /translation="MELKVIDAKGQVSGSLSVSDALFAREYNEALVHQLVNAYLANAR
                     SGNRAQKTRAEVKHSTKKPWRQKGTGRARSGMTSSPLWRKGGRAFPNKPDENFTQKVN
                     RKMYRAGMATILSQLARDERLFVIEALTAETPKTKVFAEQVKNLALEQVLFVTKRLDE
                     NVYLASRNLPNVLVLEAQQVDPYSLLRYKKVIITKDAVAQLEEQWV"
     gene            1593..1907
                     /gene="rplW"
                     /locus_tag="ACFJAG_001283"
     CDS             1593..1907
                     /gene="rplW"
                     /locus_tag="ACFJAG_001283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HFC3980559.1"
                     /translation="MNQQRLTQVILAPVVSEKSNVLAEKCNQMTFKVLANATKPEIKA
                     AVELLFGVQVASVTTVTTKGKTKRFGRILGRRSDVKKAYVSLADGQELDLEAAAAAAD
                     KE"
     gene            1913..2746
                     /gene="rplB"
                     /locus_tag="ACFJAG_001284"
     CDS             1913..2746
                     /gene="rplB"
                     /locus_tag="ACFJAG_001284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HFC3980560.1"
                     /translation="MAIVKMKPTSAGRRGMVRVVTEGLHKGAPYAPLLEKKNSTAGRN
                     NNGHITTRHKGGGHKHHYRVVDFKRNKDGISAKVERIEYDPNRTAFIALLCYADGERR
                     YIIAPRGIQAGVVLVSGAEAAIKVGNTLPIRNIPVGTTIHCIEMKPGKGAQIARSAGA
                     SAVLLAKEGAYAQVRLRSGEVRKINVDCRATIGEVGNEEQSLKKIGKAGANRWRGIRP
                     TVRGVVMNPVDHPHGGGEGRTGEAREPVSPWGTPAKGYRTRNNKRTDNMIVRRRYSNK
                     G"
     gene            2752..3030
                     /gene="rpsS"
                     /locus_tag="ACFJAG_001285"
     CDS             2752..3030
                     /gene="rpsS"
                     /locus_tag="ACFJAG_001285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011148791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HFC3980561.1"
                     /translation="MARSLKKGPYVDLHLLKKVDAVRASNDKRPIKTWSRRSTILPDF
                     IGLTIAVHNGRTHVPVFISDNMVGHKLGEFSLTRTFKGHLADKKAKKK"
     gene            3039..3368
                     /gene="rplV"
                     /locus_tag="ACFJAG_001286"
     CDS             3039..3368
                     /gene="rplV"
                     /locus_tag="ACFJAG_001286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003795898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HFC3980562.1"
                     /translation="MRVNAQHKNARISAQKARLVADLIRGKDVAQALNILAFSPKKGA
                     ELIKKVLESAIANAEHNNGADIDELKVVTIFVDKGPSLKRFQARAKGRGNRIEKQTCH
                     INVTVGN"
     gene            3378..4070
                     /gene="rpsC"
                     /locus_tag="ACFJAG_001287"
     CDS             3378..4070
                     /gene="rpsC"
                     /locus_tag="ACFJAG_001287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HFC3980563.1"
                     /translation="MGQKINPTGFRLAVTKDWASKWFAKSTDFSTVLKQDIDVRNYLR
                     QKLANASVGRVIIERPAKSARITIHSARPGVVIGKKGEDIEVLKRDLQVLMGVPIHVN
                     IEEIRRPELDAQIIADGIAQQLEKRVQFRRAMKRAMQNAMRSGAKGIKIMTSGRLNGA
                     DIARSEWYREGRVPLHTLRANVDYATSEAHTTYGVLGLKVWVYTEGNIKSSKPEHESK
                     QRKAGRRNAAAN"
     gene            4054..4470
                     /gene="rplP"
                     /locus_tag="ACFJAG_001288"
     CDS             4054..4470
                     /gene="rplP"
                     /locus_tag="ACFJAG_001288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008955643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HFC3980564.1"
                     /translation="MLQPTRLKYRKQQKGRNTGIATRGNKVSFGEFGLKAVGRGRLTA
                     RQIEAARRAMTRHIKRGGRIWIRVFPDKPITEKPIQVRMGGGKGNVEYYIAEIKPGKV
                     LYEMDGVPEELAREAFELAAAKLPIPTTFVVRQVGQ"
     gene            4470..4661
                     /gene="rpmC"
                     /locus_tag="ACFJAG_001289"
     CDS             4470..4661
                     /gene="rpmC"
                     /locus_tag="ACFJAG_001289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009175233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HFC3980565.1"
                     /translation="MKANELKDKSVEQLNADLLDLLKAQFGLRMQNATGQLGKPSELK
                     RVRRDIARIKTVLTEKGAK"
     gene            4661..4924
                     /gene="rpsQ"
                     /locus_tag="ACFJAG_001290"
     CDS             4661..4924
                     /gene="rpsQ"
                     /locus_tag="ACFJAG_001290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HFC3980566.1"
                     /translation="MSETKNVRTLQGKVVSDKMDKTVTVLVERKVKHSLYGKIIRLST
                     KIHAHDENNQYGIGDVVVISESRPLSKTKSWVVSELVEKARSI"
     gene            5146..5514
                     /gene="rplN"
                     /locus_tag="ACFJAG_001291"
     CDS             5146..5514
                     /gene="rplN"
                     /locus_tag="ACFJAG_001291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012728338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HFC3980567.1"
                     /translation="MIQMQTILDVADNSGARRVMCIKVLGGSKRRYASVGDIIKVAVK
                     DAVPRGRVKKGDVYNAVVVRTAKGVRRPDGALIKFDNNAAVLLNNKLEPLGTRIFGPV
                     TRELRTERFMKIVSLAPEVL"
     gene            5526..5849
                     /gene="rplX"
                     /locus_tag="ACFJAG_001292"
     CDS             5526..5849
                     /gene="rplX"
                     /locus_tag="ACFJAG_001292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HFC3980568.1"
                     /translation="MNKIIKGDRVVVIAGKDKGKQGQVVRVLGGKVVVEGVNVVKRHQ
                     KPNPMRGIKGGIITKEMPLDISNIAILNPETNKADRVGIKLIENEGKVKRVRFFKSNG
                     SIIGA"
     gene            5859..6398
                     /gene="rplE"
                     /locus_tag="ACFJAG_001293"
     CDS             5859..6398
                     /gene="rplE"
                     /locus_tag="ACFJAG_001293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008955648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HFC3980569.1"
                     /translation="MARLREFYKETVVPELVKQFGYKSVMEVPRIEKITLNMGVGEAV
                     ADKKVMEHAVSDLERIAGQRPVVTVARKSIAGFKIRDNYPVGCKVTLRRDQMFEFLDR
                     LITIALPRVRDFRGVSGKSFDGRGNYNMGVREQIIFPEIEYDKIDALRGLNITITTTA
                     KTDEEAKALLSLFKFPFKG"
     gene            6401..6706
                     /gene="rpsN"
                     /locus_tag="ACFJAG_001294"
     CDS             6401..6706
                     /gene="rpsN"
                     /locus_tag="ACFJAG_001294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HFC3980570.1"
                     /translation="MAKKALINRDLKRQALAKKYAAKRAAIKAVINDSNATEEERFEA
                     RLRFQSIPRNAAPVRQRRRCALTGRPRGTFRKFGLGRIKIREIAMRGEIPGVVKASW"
     gene            6722..7114
                     /gene="rpsH"
                     /locus_tag="ACFJAG_001295"
     CDS             6722..7114
                     /gene="rpsH"
                     /locus_tag="ACFJAG_001295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HFC3980571.1"
                     /translation="MSMHDPISDMLTRIRNAQRANKAAVAMPSSKLKCAIAKVLKEEG
                     YIEDFAVSSDVKSILEIQLKYYAGRPVIEQIKRVSRPGLRIYKASSEIPSVMNGLGIA
                     IVSTSKGVMTDRKARSQGVGGELLCIVA"
     gene            7128..7661
                     /gene="rplF"
                     /locus_tag="ACFJAG_001296"
     CDS             7128..7661
                     /gene="rplF"
                     /locus_tag="ACFJAG_001296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HFC3980572.1"
                     /translation="MSRVAKNPVTVPAGVEVKFGTEALVIKGKNGELSFPLHSDVAIE
                     FNDGKLTFVANNSSKQANAMSGTARALVSNMVKGVSEGFEKKLQLIGVGYRAQAQGKI
                     LNLSLGFSHPIVYEMPEGVSVQTPSQTEIVLTGSDKQVVGQVASEIRAFRAPEPYKGK
                     GVRYVGEVVVMKEAKKK"
     gene            7675..8028
                     /gene="rplR"
                     /locus_tag="ACFJAG_001297"
     CDS             7675..8028
                     /gene="rplR"
                     /locus_tag="ACFJAG_001297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HFC3980573.1"
                     /translation="MDKHTTRLRRARKTRARIADLKMVRLCVFRSNNHIYAQVISAEG
                     DKVLAQASTLEAEVRGSLKSGSNVEAAAIVGKRIAEKAKAAGVEKVAFDRSGFQYHGR
                     VKALAEAARENGLSF"
     gene            8047..8565
                     /gene="rpsE"
                     /locus_tag="ACFJAG_001298"
     CDS             8047..8565
                     /gene="rpsE"
                     /locus_tag="ACFJAG_001298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HFC3980574.1"
                     /translation="MAKHEIEERGDGLIEKMVAVNRVTKVVKGGRIMAFSALTVVGDG
                     DGRIGMGKGKSKEVPVAVQKAMDQARRSMIKVPLKNGTIHHEVIGRHGATKVFMQPAK
                     EGSGVKAGGPMRLVFDAMGIHNISAKVHGSTNPYNIVRATLDGLSKLHTPADIAAKRG
                     LTVEDILGVNHG"
     gene            8558..8743
                     /gene="rpmD"
                     /locus_tag="ACFJAG_001299"
     CDS             8558..8743
                     /gene="rpmD"
                     /locus_tag="ACFJAG_001299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HFC3980575.1"
                     /translation="MAEQKKIRVTLVKSLIGTIESHRACARGLGLCRREHTVEVLDTS
                     ENRGMINKISYLLKVES"
     gene            8745..9179
                     /gene="rplO"
                     /locus_tag="ACFJAG_001300"
     CDS             8745..9179
                     /gene="rplO"
                     /locus_tag="ACFJAG_001300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HFC3980576.1"
                     /translation="MFLNTIQPAVGATHAGRRVGRGIGSGLGKTGGRGHKGQKSRSGG
                     FHKVGFEGGQMPLQRRLPKRGFKSLTVSANAQLRLSELESIAVNEIDILVLKQAGLIA
                     STVSNVKVIASGEISKAVALKGIKVTKGARAAIEDVGGKIEM"
     gene            9191..10501
                     /gene="secY"
                     /locus_tag="ACFJAG_001301"
     CDS             9191..10501
                     /gene="secY"
                     /locus_tag="ACFJAG_001301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HFC3980577.1"
                     /translation="MANQQTSSGSSKFGDLKKRLLFLFGALIVFRIGAHIPVPGVDAV
                     ALAKLYESAGNGILGILNMFSGGSLERFSIFAIGIMPYISASIIVQLASEILPSLKAL
                     KKEGEAGRKVITKYTRYGTVLLAILQSLGVASFVFQQGIVVTSSFEFHVSTVVSLVTG
                     TMFLMWLGEQITERGIGNGISLIITAGIASGIPSGIAKLVTLTNQGSMSMLTALLIVF
                     GALLLIYLVVYFESAQRKIPIHYAKRQFNGRAGSQNTHMPFKLNMAGVIPPIFASSII
                     LFPSTLLGWFGSADTNSVLHKIAGLLQHGQLLYMALFAATVIFFCYFYTALVFSPKEM
                     AENLKKSGAFVPGIRPGEQTSRYLEKVVLRLTLFGAFYITTICLIPEFLTTVLNVPFY
                     LGGTSLLILVVVTMDFSTQINSYRLTQQYDKLMTRSEMKSFSRK"
     gene            10506..10724
                     /gene="infA"
                     /locus_tag="ACFJAG_001302"
     CDS             10506..10724
                     /gene="infA"
                     /locus_tag="ACFJAG_001302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HFC3980578.1"
                     /translation="MAKEDTIQMQGEILETLPNATFKVKLENDHIVLGHISGKMRMHY
                     IRISPGDKVTVELTPYDLTRARIVFRAR"
     gene            10745..10858
                     /gene="rpmJ"
                     /locus_tag="ACFJAG_001303"
     CDS             10745..10858
                     /gene="rpmJ"
                     /locus_tag="ACFJAG_001303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006232360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HFC3980579.1"
                     /translation="MRVQPSVKKICRNCKIIRRNRVVRVICTDPRHKQRQG"
     gene            10924..11286
                     /gene="rpsM"
                     /locus_tag="ACFJAG_001304"
     CDS             10924..11286
                     /gene="rpsM"
                     /locus_tag="ACFJAG_001304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HFC3980580.1"
                     /translation="MARIAGVNIPNNAHIVIGLQAIYGIGATRAKLICEAANIAPDTK
                     AKDLDETQLDALRDQVAKYEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRT
                     RTNARTRKGPRKAIAGKK"
     gene            11306..11701
                     /gene="rpsK"
                     /locus_tag="ACFJAG_001305"
     CDS             11306..11701
                     /gene="rpsK"
                     /locus_tag="ACFJAG_001305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001029758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HFC3980581.1"
                     /translation="MAKANTASRVRKKVRKTVSEGIVHVHASFNNTIITITDRQGNAL
                     SWATSGGAGFKGSRKSTPFAAQVAAEAAGKVAQEYGVKNLEVRIKGPGPGRESSVRAL
                     NALGFKITSITDVTPLPHNGCRPPKKRRI"
     gene            11721..12341
                     /gene="rpsD"
                     /locus_tag="ACFJAG_001306"
     CDS             11721..12341
                     /gene="rpsD"
                     /locus_tag="ACFJAG_001306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004410410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HFC3980582.1"
                     /translation="MARYIGPKCKLARREGTDLFLKSARRSLDSKCKIDSAPGQHGAK
                     KPRLSDYGLQLREKQKIRRIYGVLERQFRRYFAEADRRKGSTGELLLQLLESRLDNVV
                     YRMGFGSTRAEARQLVSHKAIVVNGQVVNIPSFQVKAGDVVSVREKAKKQVRIQEALG
                     LATQIGLPGWVSVDADKLEGVFKNMPDRSELTGDINEQLVVEFYSK"
     gene            12367..13353
                     /gene="rpoA"
                     /locus_tag="ACFJAG_001307"
     CDS             12367..13353
                     /gene="rpoA"
                     /locus_tag="ACFJAG_001307"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009313011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HFC3980583.1"
                     /translation="MQNSTTEFLKPRQIDVNTFSATRAKVSMQPFERGFGHTLGNALR
                     RILLSSMNGFAPTEVAIAGVLHEYSTVGGVQEDVVDILLNIKGIVFKLHGRSQVQLVL
                     KKSGSGVVSAGDIELPHDVEILNPGHVICHLADNGQIEMEIKVEQGRGYQSVSGRQVV
                     RDENRQIGAIQLDASFSPISRVSFEVEPARVEQRTDLDKLVLDIETDGSIDPEEAVRS
                     AARILIDQMSIFADLQGTPVEEVEEKSPPIDPVLLHPVDDLELTVRSANCLKAEDIYY
                     IGDLIQRTETELLKTPNLGRKSLNEIKEVLASKGLTLGSKLEAWPPVGLEKP"
     gene            13377..13745
                     /gene="rplQ"
                     /locus_tag="ACFJAG_001308"
     CDS             13377..13745
                     /gene="rplQ"
                     /locus_tag="ACFJAG_001308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HFC3980584.1"
                     /translation="MRHRNGNRKLNRTSSHRAAMLRNMANSLLTHETIVTTLPKAKEL
                     RRVVEPLITLGKKPSLASRRLAFDRTRDRDVVVKLFGDLGPRFTARNGGYVRVLKYGF
                     RKGDNAPLALVELVDKPAAE"
     gene            13892..14605
                     /gene="minC"
                     /locus_tag="ACFJAG_001309"
     CDS             13892..14605
                     /gene="minC"
                     /locus_tag="ACFJAG_001309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004857 - enzyme inhibitor activity
                     [Evidence IEA];
                     GO_process: GO:0000918 - division septum site selection
                     [Evidence IEA];
                     GO_process: GO:1901891 - regulation of cell septum
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinC"
                     /protein_id="HFC3980585.1"
                     /translation="MMVYIMNAFDIKSTKMDVLSISLHTSDLFDLEDVLVKLGKKFQE
                     SGVVPFVLDVQEFDYPESLDLAALVSLFSRHGMQILGLKHSNERWAAVAMKYHLLFCL
                     SHSENVKELGQVEVQKTEDGQKARKTVLITSPVRTGQQVYAEDGDLIVTGAVNQGAEL
                     IADGNMHIYAPMRGRALAGAKGDTSARIFIHSMQAELVSVAGIYRNFEQDLPDHLHKQ
                     PVQILLQDNRLVISAIGSE"
     gene            14634..15449
                     /gene="minD"
                     /locus_tag="ACFJAG_001310"
     CDS             14634..15449
                     /gene="minD"
                     /locus_tag="ACFJAG_001310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0000918 - division septum site selection
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinD"
                     /protein_id="HFC3980586.1"
                     /translation="MAKIIVVTSGKGGVGKTTTSASIATGLALRGYKTAVIDFDVGLR
                     NLDLIMGCERRVVYDLINVIQGEATLNQALIKDKNCENLFILPASQTRDKDALTREGV
                     EKVMQELSGKKMGFEYIICDSPAGIEQGALMALYFADEAIVTTNPEVSSVRDSDRILG
                     ILQSKSRKAEQGGSVKEHLLITRYSPERVAKGEMLSVQDICDILRIPLLGVIPESQNV
                     LQASNSGEPVIHQDSVAASEAYKDVIARLLGENREMRFLEAEKKSFFKRLFGG"
     gene            15453..15716
                     /gene="minE"
                     /locus_tag="ACFJAG_001311"
     CDS             15453..15716
                     /gene="minE"
                     /locus_tag="ACFJAG_001311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division topological specificity factor
                     MinE"
                     /protein_id="HFC3980587.1"
                     /translation="MSLIELLFGRKQKTATVARDRLQIIIAQERAQEGQTPDYLPTLR
                     KELMEVLSKYVNVSLDNIRISQEKQDGMDVLELNITLPEQKKV"
     gene            15720..16640
                     /gene="oxyR"
                     /locus_tag="ACFJAG_001312"
     CDS             15720..16640
                     /gene="oxyR"
                     /locus_tag="ACFJAG_001312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator OxyR"
                     /protein_id="HFC3980588.1"
                     /translation="MTLTELRYIVAVAQERHFGRAARRCFVSQPTLSIAIKKLEEELA
                     VSLFDRSSNDIITTEAGERIVAQARKVLKEAELIRHLANEEQNELEGAFKLGLIFTVA
                     PYLLPKLIVSLRRTAPKMPLMLEENYTHTLTESLKRGDVDAIIVAEPFQEPGIVTEPL
                     YDEPFFVIVPKGHSFEELDAVSPRMLGEEQVLLLTEGNCMRDQVLSSCSELAAKQRIQ
                     GLTNTLQGSSINTIRHMVASGLAISVLPATALTENDHMLFSIIPFEGTPPSRRVVLAY
                     RRNFVRPKALSAMKAAIMQSQLHGVSFIHD"
BASE COUNT         4674 a         3210 c         4225 g         4907 t
ORIGIN      
        1 ttaaacaaca aagaattgaa tttggaagaa cggcatgatt tggagcgggc ggttaagatc
       61 ttgcaggaca cgcacgtcat cccggtttgt cggagaaaga tgcatacgcc gtgatggtcg
      121 gataccgaca ctttaaaagc atccgacccc atgccttctg aagattcaaa acgcttcaga
      181 cggcatattg aagatatttc tgatatttct gttgatattt ctttgacttg tcggatataa
      241 tgtcaagctt ggtacatttt tgccaagttt aactttgtct gaaagacagg ccaatcgcag
      301 cctgtccctt tactttaaaa ggaaaataat catgacttta ggtctggttg gacgcaaagt
      361 tggtatgacc cgcgtgttcg acgagcaggg tgtttctgtt ccggtaaccg ttttggatat
      421 gtctgccaac cgcgttacac aagtaaaatc caaagatact gacggctata ccgccgttca
      481 agttaccttt ggtcagaaaa aagccaatcg tgtcaacaaa gccgaagccg gacactttgc
      541 aaaagcaggt gttgaagccg gtcgcggttt gattgagttt gctttgactg aagaaaaact
      601 ggctgaattg aaagccggtg acgaaatcac cgtttctatg tttgaagtcg gtcaactggt
      661 cgatgtaacc ggtacctcta aaggtaaagg tttctccggc acgatcaaac gtcataactt
      721 cggtgcccaa cgtacttccc acggtaactc ccgttctcac cgcgttccag gctctatcgg
      781 tatggcgcaa gacccgggtc gcgtgttccc cggtaagcgc atggccggcc aatacggcaa
      841 caccaaagca actgttcaaa aattggaagt tgtccgtgtt gatgcagaac gccaactgct
      901 gttggttaag ggtgctgttc cgggtgcggt caacagcgat gttgtagttc gtcccagcgt
      961 gaaagtaggt gcgtaatgga attgaaagta attgacgcta aaggacaagt ttcaggcagc
     1021 ctgtctgttt ctgatgcttt gttcgcccgc gaatacaatg aagcgttggt tcaccagctg
     1081 gtaaatgcct acttggcaaa cgcccgctct ggtaaccgtg ctcaaaaaac ccgtgccgaa
     1141 gtaaaacact caaccaaaaa accatggcgt caaaaaggta ccggccgcgc ccgttccggt
     1201 atgacttctt ctccgctgtg gcgtaaaggc ggtcgcgcgt tcccgaacaa acccgacgaa
     1261 aacttcactc aaaaagtaaa ccgtaaaatg taccgtgccg gtatggcgac tatcctgtcc
     1321 caattggcgc gtgacgagcg tttgtttgtg attgaggcgt tgactgccga aactcccaaa
     1381 accaaagttt ttgccgaaca agtaaaaaat ttggctctgg agcaagtgct gtttgtaacc
     1441 aaacggctcg acgagaatgt ttacttggct tcacgcaact tgccaaacgt attggttttg
     1501 gaagctcaac aagttgatcc ttacagcttg ctgcgttata aaaaagtaat catcactaaa
     1561 gatgcggttg cacaattaga ggagcaatgg gtatgaatca acaacgtttg actcaagtaa
     1621 tcttggcgcc tgtcgtttct gaaaaaagca acgtattggc tgaaaaatgc aaccaaatga
     1681 cgtttaaagt cttggcaaat gcaaccaaac ctgaaatcaa agctgctgtc gagctgctgt
     1741 tcggtgttca agttgcttct gtaactaccg ttaccactaa aggcaaaact aagcgttttg
     1801 gtcgtatttt gggtcgccgc agcgatgtta aaaaagctta tgtaagcttg gctgacggtc
     1861 aagagttgga tttggaagcc gctgctgcag ctgcagataa ggaataaaca aaatggcaat
     1921 cgttaaaatg aagccgacct ctgcaggccg tcgcggcatg gttcgcgtgg taacagaagg
     1981 tttgcacaaa ggtgcacctt atgcaccctt gcttgaaaag aaaaattcta ctgccggccg
     2041 taacaataat ggtcatatca ccacccgtca caaaggcggc ggtcataaac accattaccg
     2101 tgttgtagac tttaaacgta acaaagacgg catttctgct aaagtagagc gtatcgaata
     2161 cgatcctaac cgtactgcct tcatcgcact gttgtgctat gcagacggcg agcgtcgtta
     2221 catcatcgct cctcgcggta ttcaagccgg tgtcgtattg gtttccggtg ctgaagctgc
     2281 catcaaagta ggcaacaccc tgccgatccg caacattccc gttggtacga ctatccactg
     2341 tatcgaaatg aaacccggta aaggtgctca aatcgcacgt tctgccggtg cttctgcggt
     2401 attgttggct aaagaaggtg catacgctca agtccgtctg cgctctggcg aagttcgtaa
     2461 aatcaacgta gattgccgtg cgaccatcgg tgaagtcggt aacgaagagc aaagtctgaa
     2521 aaaaatcggt aaagccggtg ctaaccgttg gcgcggtatt cgtccgaccg tacgcggtgt
     2581 tgtcatgaat cccgtcgatc acccgcatgg tggtggtgaa ggccgtaccg gcgaagcccg
     2641 cgaaccggtt agtccatggg gtactcctgc taaaggctac cgcactcgta ataacaaacg
     2701 cacggataat atgattgttc gtcgccgtta ctcaaataaa ggttaattag tatggctcgt
     2761 tcattgaaaa aaggcccata tgtagacctg catttgctga aaaaagtaga tgctgttcgc
     2821 gcaagcaacg acaaacgccc gattaaaacc tggtctcgtc gttctaccat tctgcctgat
     2881 tttatcggtc tgaccattgc cgtgcacaac ggtcgcaccc atgtgcctgt gtttatcagc
     2941 gacaatatgg ttggtcataa attaggcgaa ttctcattga cccgtacctt taaaggccac
     3001 ctggccgata aaaaggctaa aaagaaataa ggtgaatcat gagagtaaat gcacaacata
     3061 aaaatgcccg tatctctgct caaaaggctc gtttggtagc tgatttgatt cgtggtaaag
     3121 acgttgccca agctttgaat attttggctt tcagccctaa aaaaggtgcc gagctgatca
     3181 aaaaagtatt ggagtcagct attgctaatg ctgagcataa taacggtgcg gacattgatg
     3241 aactgaaagt ggtaactatc tttgttgaca aaggtccaag cttgaaacgt tttcaagctc
     3301 gcgccaaagg tcgcggtaac cgcatcgaaa aacaaacttg tcatatcaat gtgacagtgg
     3361 gtaactaagg aaaagctatg ggacaaaaga ttaaccctac aggctttcgc ctggcggtaa
     3421 ctaaagactg ggcttcaaaa tggtttgcta aaagtaccga cttttctact gttttgaagc
     3481 aggatatcga tgttcgcaat tatttgcgtc aaaaattggc caatgcttcg gttggtcgag
     3541 taattattga acgccctgca aaatctgcac gcattaccat tcactccgct cgtccgggtg
     3601 tggttatcgg taaaaaaggt gaggatatcg aagttttgaa acgtgacttg caagtcttga
     3661 tgggtgtacc tattcatgta aatattgaag agattcgccg tcctgagttg gatgctcaaa
     3721 ttattgctga cggtatcgcc cagcagttgg aaaaacgcgt tcaattccgt cgtgctatga
     3781 aacgagcaat gcaaaatgca atgcgttctg gtgctaaagg cattaagatt atgacttcag
     3841 gccgtctgaa tggtgcggat attgcccgta gcgaatggta tcgtgaaggt cgcgtgccac
     3901 tgcatacttt acgtgcaaat gtagattatg caaccagcga agcgcacacc acatatggtg
     3961 tattgggtct gaaagtttgg gtttatacgg aaggcaatat taaatcttcc aaacctgaac
     4021 atgagagtaa acaaagaaag gcaggtagac gtaatgctgc agccaactag actgaaatac
     4081 cgtaagcaac aaaagggtcg caataccggc atcgctactc gcggtaataa ggtaagtttc
     4141 ggtgagttcg gcttgaaagc cgtaggtcgt ggtcgtttga ctgcccgtca aatcgaagct
     4201 gctcgtcgtg caatgacccg tcacatcaaa cgtggtggtc gtatttggat tcgtgtattc
     4261 cctgacaaac cgattactga aaagcctatt caagttcgta tgggtggcgg taaaggtaac
     4321 gtggaatatt acattgccga aattaaacca ggtaaagtgt tgtatgaaat ggatggcgtt
     4381 ccagaggaac tggctcgtga agcattcgag ttggctgctg ccaaattgcc tattcctaca
     4441 acctttgtag taagacaggt gggtcaataa tgaaagcaaa tgaattgaaa gacaaatccg
     4501 ttgagcagtt gaatgcagat ttgttggact tgttgaaagc tcagtttggc ttacgtatgc
     4561 aaaacgctac cggtcaatta ggcaaaccaa gtgaattgaa acgtgtacgt cgcgatattg
     4621 ctcgtattaa aaccgtttta actgaaaaag gtgctaagta atgagcgaaa ctaaaaatgt
     4681 tcgtactttg caaggcaaag tagtaagcga caaaatggat aaaaccgtaa cagtattggt
     4741 tgagcgtaaa gtaaaacatt cgctgtatgg taagattatt cgattatcta ctaaaatcca
     4801 tgcccatgat gaaaataatc aatatggaat tggtgatgtg gttgttatat cggaatcccg
     4861 tccattgtca aaaactaaat cttgggttgt cagtgagttg gttgagaaag cacgttctat
     4921 ttaagaatta aagcaacgtg cttggaatgg gaaacgaagt attgcagcaa atttaatttg
     4981 cgtgtaaact tcgtttcctg tcttccagtt tcttctggaa gtttcttccc tttcgggatc
     5041 caagactggt ttacttgaac cgcaaggttt catttaataa gcagcggctt tgctgtaagt
     5101 tatctgaaag tggtaaatta agttggttaa tttaaaggta ataatatgat tcaaatgcag
     5161 accatcttag atgtggctga taactctggt gcgcgtcgcg taatgtgtat caaggtattg
     5221 ggcggatcta agcgtcgcta cgcttctgtt ggcgatatta ttaaagtggc agttaaagat
     5281 gcggttccgc gtggccgtgt caaaaaaggc gatgtatata atgcggtagt tgttcgtact
     5341 gctaagggtg tgcgtcgtcc tgatggtgcg ttaattaaat tcgataacaa tgccgccgtg
     5401 ttgctgaata ataaacttga acctttgggt actcgtatct ttggtccggt aacccgtgaa
     5461 ttgcgtactg agcgatttat gaaaatcgtt tcattggcac ctgaagtatt ataaggaata
     5521 gcacgatgaa taaaatcatt aaaggcgata gggttgtagt aattgctggt aaggataaag
     5581 gtaagcaggg tcaagtagtt cgagtgttgg gtggtaaagt tgttgttgag ggcgttaatg
     5641 ttgtaaaacg ccatcaaaaa cctaatccaa tgcgtggcat taagggcggt attattacta
     5701 aagaaatgcc tttggatatt tctaatatcg caatcctgaa tccggaaact aataaagcgg
     5761 accgtgttgg tattaagctg attgaaaatg aaggcaaagt taaacgcgtt cgtttcttca
     5821 aatcaaatgg ctctatcatt ggggcataag gagataacat ggctcggttg agagagtttt
     5881 ataaagagac agttgttcct gaattggtta aacaatttgg ttacaaatca gtaatggaag
     5941 tcccgcgtat tgaaaaaatc accttgaata tgggtgtggg tgaggctgtt gctgacaaaa
     6001 aagttatgga acatgctgtt tccgatttag agagaattgc cggtcaaaga ccggttgtta
     6061 ctgttgcccg taaatctatc gcaggtttta aaatccgtga taactatccg gttggttgca
     6121 aagtaacatt gcgtcgtgat caaatgtttg aattcttgga tcgtttgatt actattgcat
     6181 tacctcgcgt acgtgacttc cgtggtgtga gcggtaaatc atttgatggc cgtggcaatt
     6241 acaatatggg tgttcgtgag caaattattt tcccggaaat tgaatacgat aaaattgatg
     6301 ctttgcgtgg tttgaatatt actattacta ctacagcaaa aaccgatgag gaagcgaaag
     6361 ctttattgtc attgtttaaa tttccgttca aaggataatc atggctaaga aagcacttat
     6421 taatcgtgat ctgaaacgtc aagctttggc taaaaaatat gcggctaaac gcgcggcaat
     6481 taaagcggta atcaatgatt cgaatgcaac tgaggaagag cgttttgagg ctcgtttgag
     6541 gtttcaatcc attcctcgta atgcggcacc tgtgcgtcaa cgtcgtcgtt gtgctttgac
     6601 aggtcgccct cgtggtactt tccgtaaatt tggtttgggt cgtattaaaa tccgtgaaat
     6661 cgccatgcgt ggcgaaattc cgggtgttgt taaagccagc tggtaatagg agtaattaag
     6721 aatgagtatg catgatccta tttccgatat gttgactcgt atccgcaatg cgcaacgtgc
     6781 taataaagca gcagttgcaa tgccttcttc aaaattaaag tgtgctattg caaaggtatt
     6841 gaaagaagaa ggatatattg aggacttcgc agtttcatct gacgtaaagt ctatattgga
     6901 aattcaatta aaatactatg caggtcgtcc tgtaattgaa caaatcaagc gtgtatctcg
     6961 ccccggtttg cgtatttata aagcgtctag tgagattcca agtgttatga atggcttggg
     7021 tattgctatc gttagtactt ctaaaggtgt aatgactgat cgtaaagcac gttctcaagg
     7081 tgttggtggt gagttgttat gcattgtagc ctagtggagg aaaagaaatg tcacgtgtcg
     7141 caaaaaaccc agtgacggtt cccgctggtg tagaagtaaa atttggaaca gaggcattgg
     7201 ttattaaggg taagaacggt gaattgtctt ttcctttgca ttctgatgta gccattgaat
     7261 ttaatgatgg caaattgact tttgttgcga ataatagcag taaacaagca aatgcaatgt
     7321 ctggtactgc tcgcgcatta gtcagcaata tggttaaagg tgtttcagaa ggttttgaga
     7381 agaaattaca attgataggc gtgggttatc gtgctcaagc acaaggtaaa atcttgaatc
     7441 tgtctttggg tttttctcat ccgatcgtat atgaaatgcc tgaaggtgtc tccgttcaaa
     7501 ctcctagcca aacagagatt gttttaactg gctcggataa acaagttgtt ggtcaagttg
     7561 cttctgagat tcgtgcgttc cgtgctcctg agccttataa aggtaaaggt gttcgctatg
     7621 taggcgaagt agtggtaatg aaagaagcca agaaaaaata attgaggttc actaatggat
     7681 aaacatacaa cccgactccg tcgtgcacgc aaaacccgtg ctcgtattgc ggacttgaaa
     7741 atggtaagat tatgtgtgtt ccgaagcaat aatcatattt atgctcaagt aattagtgct
     7801 gaaggtgata aagtattggc tcaagcctct acattggaag ctgaggtgcg cggtagtctg
     7861 aaatctggaa gcaatgttga agcagctgca atagttggta aacgtattgc tgagaaggct
     7921 aaagcagcag gtgtagaaaa ggttgctttt gatcgttcag gtttccaata tcacggtcgt
     7981 gtgaaggctt tggctgaagc tgctcgtgaa aatggtttaa gcttctaaat atttggagac
     8041 tttcagatgg caaaacatga aattgaagaa cgcggtgacg gtctgattga aaagatggtc
     8101 gcagttaacc gtgtaaccaa agtagttaaa ggtggtcgca ttatggcttt ctctgcgcta
     8161 actgttgttg gtgatggaga tggtcgtatt ggtatgggta aaggtaagtc aaaagaagtg
     8221 cctgttgcag tccaaaaggc gatggatcaa gcacgacgct ctatgattaa ggtaccatta
     8281 aaaaatggta cgatccatca tgaggttatt ggtcgacatg gtgctactaa agtatttatg
     8341 cagcctgcta aagagggtag tggcgtaaaa gccggtggac ctatgcgttt ggtttttgat
     8401 gctatgggca ttcataatat ttccgccaaa gtgcacggat ctactaaccc atataatatc
     8461 gtacgtgcaa cattagatgg tttgtctaag ttgcatactc ctgctgatat cgcagccaaa
     8521 cgtggcttga cagtggaaga cattttggga gttaaccatg gctgaacaaa aaaagattag
     8581 ggttacattg gttaaaagcc tgattggtac aattgaatct catcgtgcat gtgcacgcgg
     8641 tttaggtttg tgtcgtcgcg agcatacggt agaggtttta gatacctctg aaaaccgtgg
     8701 tatgattaat aaaatcagct acttgttgaa agtggagtct tgatatgttt ttgaatacaa
     8761 ttcaacctgc tgttggtgct acgcatgctg gtcgtcgtgt tggacgcggt attggtagtg
     8821 gtcttggcaa aacgggtggt cgtggtcata aaggtcaaaa gagccggtct ggtgggtttc
     8881 ataaggtggg tttcgagggt ggtcaaatgc ccttgcaacg acgcctccct aaaagaggtt
     8941 ttaaatcttt aacagtatca gctaatgcac agcttcgttt aagtgaactg gaatcaattg
     9001 ctgttaatga gattgatatt ttagtcttaa agcaagcagg tctgattgca tctacagtct
     9061 ctaatgttaa agttattgct tctggtgaaa tttctaaggc agttgctttg aagggtatta
     9121 aagttaccaa aggtgcgaga gctgctatcg aggatgttgg tggtaagatt gaaatgtaag
     9181 gtttaatatt gtggctaatc aacaaacgtc atcaggttca tccaagtttg gagatcttaa
     9241 gaaacgtctt ttgtttctat ttggagcatt gattgttttt cgaattggtg cccatatacc
     9301 cgtacctggg gttgatgctg ttgctttagc taaattatac gaaagcgctg gaaacggcat
     9361 cctgggaata ttgaatatgt tttccggtgg gtcgttagag cgctttagta tatttgcaat
     9421 aggaattatg ccatatattt cagcttctat tattgtacag ctcgcttctg aaattttgcc
     9481 atcattgaag gctttaaaaa aagaagggga ggctggtaga aaggtaatta cgaaatatac
     9541 taggtatggt actgttttgt tagcaattct tcaaagtcta ggtgttgcat ctttcgtatt
     9601 tcagcaagga attgttgtaa caagttcatt tgagtttcat gtttccacgg tagtttcttt
     9661 ggtaacggga accatgtttc ttatgtggct tggggagcaa attactgaaa ggggtatcgg
     9721 gaacggtatt tctttaatca ttacggcagg tattgcttca ggtattcctt cgggtattgc
     9781 aaagctggtt acactgacga accaaggttc tatgagcatg cttacggcgt tgcttattgt
     9841 atttggtgcc ttattattaa tttatttggt tgtatacttt gaaagtgcac agcggaagat
     9901 tcctattcat tatgcaaaac gccagtttaa tggtagggcg ggtagtcaaa atacgcatat
     9961 gcctttcaag ttgaatatgg ctggtgttat tcccccaatt tttgcttcca gtattattct
    10021 atttccatct actcttttag gttggtttgg ttcggctgat acaaatagtg ttttgcacaa
    10081 aatagctgga ttgttacaac acggtcaatt gctgtatatg gctttatttg cagcgacagt
    10141 tattttcttt tgttattttt atacggcttt ggtttttagt cctaaagaaa tggcagagaa
    10201 tttaaaaaag agtggtgctt ttgttcctgg gattagacct ggtgagcaga cctctaggta
    10261 tttagaaaaa gttgtattac gtttgacatt gtttggagct ttttatatta caactatttg
    10321 tttaattcca gagttcttaa ctacggtttt aaatgtacct ttttatttgg gtggcacgtc
    10381 tttgttgatt ctagttgttg taacgatgga ttttagtaca caaataaatt cgtataggct
    10441 tactcaacag tatgataagt taatgactcg ttcagaaatg aaatcatttt ctcggaaata
    10501 gaattatggc gaaagaagat actatccaaa tgcaaggtga aattcttgaa actttaccta
    10561 acgcaacatt taaagtaaaa cttgagaatg accatattgt attgggtcat atttctggga
    10621 agatgcggat gcattacatt cgtatttctc cgggagataa ggtcacagta gagctgacac
    10681 cttatgattt aactagggct cgaatcgttt tcagagcaag ataaaccaat aaaaggaaaa
    10741 taaaatgcgt gtacaaccat ctgttaagaa aatttgccga aattgcaaga ttattcgtcg
    10801 aaatcgtgta gttcgtgtga tttgtactga tccccgtcac aaacagcgtc aaggttaatg
    10861 gaatatttct tttaatgtga ttctgtgata tagtgacaaa atttgctcta aaaaggaaaa
    10921 aacatggctc gtattgcagg ggtaaatatc cctaataacg cacacatcgt aattggtctt
    10981 caggctattt acggtattgg tgctactcgt gctaaattga tttgtgaggc tgcaaatatt
    11041 gcgcctgata ctaaagcaaa agatttggac gagactcaat tagatgcttt gcgtgatcaa
    11101 gttgccaagt atgaagtaga aggtgatttg cgtcgtgaag taactatgag tatcaaacga
    11161 ttgatggaca tgggctgcta tcgtggcttc cgtcatcgtc gcggcttacc atgccgcggt
    11221 caacgcactc gtacaaatgc gcgtactcgc aaaggtccgc gtaaagcgat tgctggtaag
    11281 aaataaattt taaggaattt tattaatggc taaagcaaac acagcttcac gtgtacgtaa
    11341 aaaagtacgt aaaaccgtga gtgagggtat tgtgcacgtt catgcatctt tcaacaatac
    11401 catcattaca atcactgacc gtcaaggcaa tgcgttgtct tgggctacct ctggcggcgc
    11461 tggttttaaa ggttctcgta aaagtacacc atttgcagca caagttgcag cagaagcagc
    11521 tggtaaagtt gcccaagagt atggcgttaa aaatttagag gttcgtatta aaggtccagg
    11581 tccaggtcgc gaatcctctg tacgtgcttt gaatgctctt ggtttcaaga ttaccagcat
    11641 tactgacgtt accccgttgc ctcataacgg ttgccgtccg cctaaaaaac gtcgtattta
    11701 atattggagt gatttgaaac atggcacgtt atattggccc taaatgtaag ttggcacgtc
    11761 gcgaaggtac ggatttgttt ttgaagagtg cgcgccgctc tttggattct aaatgtaaaa
    11821 ttgattccgc tcccggtcag catggtgcaa aaaaaccgcg tttgtcagac tatggtttgc
    11881 agttgcgtga aaaacaaaaa atccgccgta tttatggcgt attagaacgt cagttccgtc
    11941 gttatttcgc agaagctgat cgccgtaaag gttctaccgg cgagttgctg ttgcagttgc
    12001 tggaatctcg tttggataat gtcgtttatc gtatgggttt cggttctacc cgagctgaag
    12061 caagacagct tgtttctcat aaggctatag ttgtaaatgg acaagttgtc aatattcctt
    12121 ctttccaagt gaaagctggt gatgttgtct cagttcgtga aaaagccaaa aaacaggtac
    12181 gtattcaaga agcattgggt ttggcaactc aaatcggctt gccgggttgg gtttctgtag
    12241 atgcagataa acttgagggt gtgttcaaaa acatgccgga tcgctctgaa ttgaccggtg
    12301 atattaatga acagctggtg gtagagttct actctaaata atgctagctc agtgagggac
    12361 agttaaatgc agaatagcac aaccgaattt ttgaaacctc gtcaaattga tgtaaatact
    12421 ttttctgcaa ctcgtgcaaa agtatctatg cagccatttg aacgtggttt cggtcatacc
    12481 ttaggtaatg ctttgcgccg tatcttactg tcatccatga atggttttgc tcctactgaa
    12541 gtagctattg ccggtgtatt gcacgaatat tctactgttg gtggtgttca ggaagatgtt
    12601 gttgacattt tgctgaatat taaaggtatt gtgtttaaac tccatggtcg tagccaagtt
    12661 caacttgtgt tgaagaaatc aggttcaggt gtcgtatctg ccggtgatat tgagttgccg
    12721 catgatgtag aaattctgaa tcctggtcat gtcatttgtc atttggctga taacggtcaa
    12781 attgaaatgg aaattaaagt agagcaaggt cgtggttatc aatctgtttc aggtcgtcag
    12841 gtagttcgtg atgagaaccg tcagattggt gcaatccagt tggatgcgag cttttcgccc
    12901 atcagccgtg ttagctttga ggttgaacct gcacgtgtag agcagcggac ggatcttgat
    12961 aaattggttt tggatatcga aaccgacggt tctattgatc ctgaggaagc tgtacgcagt
    13021 gcggcacgta ttttgattga tcagatgtct atttttgctg atttgcaggg tactcctgtg
    13081 gaggaggttg aagaaaaatc acctcctatc gaccctgttc ttttgcatcc ggtggatgat
    13141 ctggaattga cagtacgttc agctaattgt ttgaaagctg aggatattta ttatattggc
    13201 gatttgattc aacgcactga aaccgagctt cttaaaacgc cgaatttggg acgtaaatct
    13261 ttgaatgaga ttaaggaagt attggcatct aaaggtttga cactgggttc taagttggaa
    13321 gcatggccac ctgtaggctt ggaaaagcct taatgaagaa ttaaaggata attgatatgc
    13381 gtcatcgtaa tggcaatcgc aaattaaacc gtaccagcag tcatcgtgct gcaatgctgc
    13441 gtaatatggc gaattcatta ttgactcacg aaactattgt aacaactctg cctaaggcca
    13501 aggaattgcg ccgtgtagta gagccgttga ttacattggg taaaaagccg tcattggcaa
    13561 gccgccgttt ggcatttgac cgtactcgcg accgtgatgt tgtagtaaaa ctgtttggcg
    13621 atttgggtcc tcgttttact gctcgtaacg gtggttatgt tcgagtgttg aaatacggat
    13681 tccgtaaagg tgataatgca cctctggcac tggttgaatt ggttgacaaa ccggctgctg
    13741 agtaatttta gtcatataac gccatctgcc gaaaagcagg tggcgttatt tttgcaatat
    13801 ctgatagata atatggtatt ggctatcatg tttaaaatat taattgaata gctaaggttt
    13861 gcgcggtaaa cttacatcat taaaaaattc tatgatggtt tatataatga atgccttcga
    13921 tataaagtcg acaaagatgg acgtattgtc tatatctttg catacatcag acttgtttga
    13981 tttggaagat gtgctggtca aattgggcaa gaagtttcaa gagtctggtg ttgttccatt
    14041 tgttctggat gttcaagaat ttgattatcc cgagtctttg gatcttgctg cattggtttc
    14101 gttgttttca aggcatggta tgcaaatttt gggtctgaag cattctaatg aacgttgggc
    14161 tgctgtggct atgaagtatc atttgctgtt ttgtctgtct cattcggaaa atgttaaaga
    14221 actgggtcag gttgaggtgc agaaaacgga ggatggtcag aaagcaagga aaacagtatt
    14281 gattacatcc cctgtccgta ccggtcagca ggtttatgcc gaagatggcg atttgattgt
    14341 tacgggggcg gtcaaccagg gggcggaatt gattgcagat ggcaatatgc atatttatgc
    14401 gccgatgaga gggcgtgctt tggccggcgc caaaggtgat acttctgccc gcatatttat
    14461 ccactccatg caggcggagt tggtttctgt cgcggggatt taccgtaatt ttgaacagga
    14521 tttgccggac catctgcaca agcagccggt acagatattg ttgcaggata accgattggt
    14581 tatcagtgca attggctcag agtaattgtt tgatatttta aaaaggaaat attgtggcaa
    14641 aaattattgt agtaacttca ggcaagggcg gtgtcggtaa aacgactacc agtgcaagta
    14701 ttgcaacagg tttggcatta cgcggatata aaactgcggt aattgatttt gatgtgggtt
    14761 tgcgcaacct cgacctcatt atgggttgcg agcgtcgtgt cgtttatgac ctgatcaatg
    14821 tcattcaggg tgaggcgacg ctcaaccagg ctttgattaa agataaaaat tgtgaaaacc
    14881 tgtttatttt gccggcttcc cagactcggg ataaagacgc tttgacacgc gagggcgtag
    14941 aaaaagtgat gcaggagctg tccggcaaga aaatgggctt tgagtatatt atttgcgact
    15001 ctcctgctgg tattgagcag ggtgcattga tggcgttgta ttttgctgat gaagccattg
    15061 taacgaccaa tcctgaggtt tccagtgtgc gtgactccga caggattttg ggcattttgc
    15121 aaagcaaatc ccgtaaggcg gagcaaggcg gttcggttaa agaacatctg ttaattacgc
    15181 gttattctcc cgaacgtgtg gcaaaaggcg aaatgctgtc tgtacaggat atttgcgata
    15241 ttctgcgtat tcctttgctg ggtgtgattc ccgaatccca aaacgtcttg caggcatcca
    15301 attccggaga accggtcatc catcaggaca gcgtagcggc ttccgaggca tataaggacg
    15361 ttattgcccg tcttttgggc gagaaccgtg aaatgcgttt cttggaagct gagaaaaaaa
    15421 gcttcttcaa acgtctgttc ggaggataag gtatgtcatt gatcgaactt ttattcggta
    15481 gaaagcagaa aacggcaacc gttgcccgcg accgccttca aatcatcatt gcccaagagc
    15541 gcgcccaaga aggtcagact ccggattacc tgccgacttt acgtaaagag ttgatggaag
    15601 tcctgtccaa atatgtgaat gtttcattag acaatatccg tatttcccaa gaaaagcagg
    15661 atggtatgga tgtgcttgag ttgaacatta ctttgccgga acagaaaaag gtataggaca
    15721 tgaccttaac cgaattgcgg tacatcgtcg cagtcgccca agaacgtcat ttcggccggg
    15781 cggcgcggcg ttgttttgtc agccagccca ctttgtctat tgccattaag aaattggaag
    15841 aagagcttgc cgtctctttg tttgaccgga gcagcaacga tattattacg accgaggcgg
    15901 gggaacgtat cgttgcacag gcgcgtaagg tattgaaaga ggcggagctt atcaggcatt
    15961 tggcaaatga agaacaaaac gagctggagg gtgcgttcaa actcgggctg atttttacgg
    16021 ttgcgccata cctgctgccg aaactgattg tctcgttgcg ccgtactgca ccgaaaatgc
    16081 ctttgatgtt ggaagagaat tacacgcata ctttgaccga gtcgctcaaa cgcggggacg
    16141 ttgacgcgat tatcgttgcc gaaccgtttc aagagccggg cattgttacc gaacccttgt
    16201 atgacgaacc gtttttcgtg attgtcccga aagggcattc atttgaggaa ctggatgccg
    16261 tttcgccccg gatgctgggt gaggagcagg ttttgctgct gacggaaggc aactgtatgc
    16321 gggatcaggt actctcaagc tgttccgaat tggcggcgaa acagcgcata caggggctga
    16381 ccaatacatt gcagggcagc tcgatcaata caatccgcca tatggtcgcc agcggtttgg
    16441 caatcagcgt gttgccggca accgcgctga ccgagaacga tcatatgctg ttcagcatta
    16501 ttccgtttga aggtacgccg ccaagccggc gggtcgtatt ggcgtatcgc cgtaattttg
    16561 tccgtccgaa ggcgttgtcg gcgatgaagg cggcgattat gcagtcgcag cttcacgggg
    16621 taagttttat ccacgactag gcgcagaaaa tgccgtctga aacgggtttc agacggcatt
    16681 tgttatcttt gccgtcaatc aggcaaacct atccgaccta cagttgcttc gaatcgtcat
    16741 tcccgcgcag gcgggaatct aggtctgtcg gtgcggaaac ttatcggata aaacgcttgc
    16801 tccaatctcg cgttccagat tcccactttc gtgggaatga cgggatcagg tttccgtatg
    16861 gatagattcg tcattcccgc gcaggcggga atctaggtct gtcggtgcgg aaacttatcg
    16921 gataaaacgc ttgctccaat ctcgcgttcc agattcccac tttcgtggga atgacggcat
    16981 attttgacat tgaataaaaa agactaaaaa cggaaa
//
LOCUS       DAXFZM010000049        16956 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.049, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000049 DAXFZM010000000
VERSION     DAXFZM010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16956)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16956)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16956
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.049"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(52..390)
                     /locus_tag="ACFJAG_001313"
     CDS             complement(52..390)
                     /locus_tag="ACFJAG_001313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030234 - enzyme regulator activity
                     [Evidence IEA];
                     GO_process: GO:0006808 - regulation of nitrogen
                     utilization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HFC3980589.1"
                     /translation="MKKIEAIVKPFKLDDVREALTEIGITGMTVSEVKGFGRQKGHTE
                     IYRGAEYAVDFLPKVKIELVLADDAVERAIDVIVEVARSGKIGDGKIFVLPVEEAIRI
                     RTGERSDAAV"
     gene            542..4498
                     /gene="purL"
                     /locus_tag="ACFJAG_001314"
     CDS             542..4498
                     /gene="purL"
                     /locus_tag="ACFJAG_001314"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase"
                     /protein_id="HFC3980590.1"
                     /translation="MSVVLPLRGVTALSDFRVEKLLQKAAALGLPEVKLSSEFWYFAG
                     SEKALDAATVEKLQALLAAQSVEQTPEAREGLHLFLVTPRLGTISPWASKATNIAENC
                     GLAGIERIERGMAVWLEGALTDEQKQQWAALLHDRMTESVLPDFQTASKLFHHLKSET
                     FSTVDVLGGGKEALVKANTETGLALSADEIDYLVENYQALQRNPSDVELMMFAQANSE
                     HCRHKIFNADFILNGEKQPKSLFGMIRDTHNAHPEGTVVAYKDNSSVIKGAKIERFYP
                     NAAENQGYRFHEEDTHIIMKVETHNHPTAIAPFAGAATGAGGEIRDEGATGKGSRPKA
                     GLTGFTVSNLNIPDLKQPWEQDYGKPEHISSPLDIMIEGPIGGAAFNNEFGRPNLLGY
                     FRTFEEKFDGQVRGYHKPIMIAGGLGSIQAQQTHKDEIPEGALLIQLGGPGMLIGLGG
                     GAASSMDTGTNDASLDFNSVQRGNPEIERRAQEVIDRCWQLGDQNPIISIHDVGAGGL
                     SNAFPELVNDAGRGAVFELREVPLEEHGLTPLQIWCNESQERYILSILEKDLDTFRAI
                     CERERCPFAVVGTATDDGHLKVRDDLFSNNPVDLPLNVLLGKPPKTTRTDKTVTPSKK
                     PFHAGDIDITEAAYRVLRLPAVAAKNFLITIGDRSVGGMTHRDQMVGKYQTPVADCAV
                     TMMGFNTYRGEAMSMGEKPAVALFDAPASGRMCVGEAITNIAAVNIGDIGNIKLSANW
                     MAACGNEGEDEKLYRTVEAVSKACQALDLSIPVGKDSLSMKTVWQDGEEKKSVVSPLS
                     LIISAFAPVKDVRKTVTPELKNVEGSVLLFIDLGFGKARMGGSAFGQVYNNMSGDAPD
                     LDDAGRLKAFYSVIQQLVAEDKLLAYHDRSDGGLFATLAEMAFAARCGISADIDCLMD
                     KFLPIHLPDFQGDPAEDLSDELYNHAAIKILFNEELGAVIQIRQKDRDYVDAAFETAG
                     LTDAVSRIGSPDFDNEFISFFGYGYFLEQNRADLQRAWQETSHAIQRLRDNPACADSE
                     FALIGDNERSALFADVKFDVNEDIAAPFINSGAKPKIAILREQGVNGQIEMAAAFTRA
                     GFDAYDVHMSDLMAGRFRLADFKMLAACGGFSYGDVLGAGEGWAKSILFHPALRDQFA
                     AFFADPNTLTLGVCNGCQMVSNLAEIIPGAETWPKFKRNLSEQFEARLNMVHVPKSAS
                     LILNEMQDSSLPVVVSHGEGRADFALHGGNISADLGIALQYVDGQNQVTQTYPLNPNG
                     SPQGIAGITNADGRVTIMMPHPERVYRAAQMSRKPEGWTELSGWYRLFAGARKALG"
     gene            complement(4569..5780)
                     /locus_tag="ACFJAG_001315"
     CDS             complement(4569..5780)
                     /locus_tag="ACFJAG_001315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007241529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:flavin oxidoreductase/NADH oxidase family
                     protein"
                     /protein_id="HFC3980591.1"
                     /translation="MLFTPFTFQNGKTAKNRIFKSAMEEQLAQNDQPSEKLVRLYGAW
                     AEGGAGVLVTGNVMVAESGKGSINDVLISDDRALEMLKKWAKARMQNDTLLIMQINHA
                     GKQSPAVVNKTPLAPSAVPLVGMNGFINPPRELSADEINGLIQQFVQTAKIAEQAGFS
                     GVQIYAVHGYLISQFLSPHHNRRQDQWGGSLENRMRFLLETYTAIRAAAGKDFLVGVK
                     LNSADFQKGGFDESESVQVVQKLSEMGIDFIEVSGGNYESPQMLAAKDSTRKREAFFI
                     DYAEKARAASQAPLIITGGFRSQTAMEDALSSGHLDLVGIARPFALVPDLANKMQNRT
                     YQTVQADRIQTGVAFVDKKAGAMLEMNWYMTQMDLIGQGKQSNPKLSAWKVLLKTLRE
                     NGKAGLSTGRA"
     gene            complement(5854..6165)
                     /locus_tag="ACFJAG_001316"
     CDS             complement(5854..6165)
                     /locus_tag="ACFJAG_001316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003680714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HFC3980592.1"
                     /translation="MPQQTMNLMRECIPIFTVLSDENRHQILHVLWKHGRMNVNELTE
                     HLHLSRPAVSHHLKIMLQAGAVAVEQVGKERFYSIAMADAVARLKQLADLMAQNCPLS
                     K"
     gene            6397..7149
                     /gene="gloB"
                     /locus_tag="ACFJAG_001317"
     CDS             6397..7149
                     /gene="gloB"
                     /locus_tag="ACFJAG_001317"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004416 - hydroxyacylglutathione hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0019243 - methylglyoxal catabolic process
                     to D-lactate via S-lactoyl-glutathione [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase"
                     /protein_id="HFC3980593.1"
                     /translation="MKITPVKALTDNYIWMIQHGNHAVCVDPSEPSPVLEFLVRNRLM
                     LAQTWVTHPHPDHEGGAAALWRGYMESPVYGESDIEAATHTVTAGTRFTFGNGQVTVW
                     ATPGHTDRHTSYLLETSDGIHVFCGDTLFSAGCGRVFTGTVEQLYDNFQRFNQLPEGT
                     LFYPAHEYTAANLRFAAHIEPDNADIQTALKAAEHTPTLPVTLAHERRVNPFLRTEIP
                     AVRQRAEALVGKTLNSGLEVFAALRELKNAYR"
     gene            7383..8837
                     /gene="mgtE"
                     /locus_tag="ACFJAG_001318"
     CDS             7383..8837
                     /gene="mgtE"
                     /locus_tag="ACFJAG_001318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015095 - magnesium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015693 - magnesium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HFC3980594.1"
                     /translation="MSIEHTPPTHDGETGQNHAERPSADFDRVHSLCEILEPAFEQIE
                     NGTPLEDAPLRDKLTELTVLLAELHPADVADVLESLPPRERNIVWLLVKPEDDGEVLL
                     EVSDAVRETLIESMDKDELLAAVDDLDADELAELADDLPHQVVYEALQTRDEEERAQV
                     KAAMSYEDNQVGAIMDFELVCIRADVACEVVLRYLRRFDSLPDHTDKIFVVDENDVLQ
                     GVLPIRKLLVADPEDLVENVMAKDVVRFRAEDDVEEAAQAFERYDLVTAPVVDENKKL
                     IGRITIDEMVDVIREESEADMLNMAGLQEEEDLFAPVLDSVKNRWMWLAVNLCTAFLA
                     SRVIGAFEGSIEKIVALAALMPIVAGIGGNSGNQTITMIVRAMAMGQLTDMQAGRLLK
                     KEVGVALVNGIIWGTVMGAVSWLLYGSLGIGLVMVAAMTLNLLLAATVGVLIPVVMEK
                     FGRDPALGSSVLITAVTDSGGFLIFLSLATLFLL"
     gene            complement(8923..9831)
                     /gene="hslO"
                     /locus_tag="ACFJAG_001319"
     CDS             complement(8923..9831)
                     /gene="hslO"
                     /locus_tag="ACFJAG_001319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HFC3980595.1"
                     /translation="MNQTAINRADARTRFIFDDMPVRGLHVRLENVWQHIVKQKNYPA
                     AIRCALGELLAAGVLLSGNLKNEGTLIVQVQGQGKLKMLVAEATSDRTVRATARWDET
                     AEIADDESLGDLLGGNGVFVLTLQPKDGEPWQGVVPLEGGSIAQMLVNYMKRSEQLDT
                     HIALSASDEAAGGLLVQRLPEEVLDEEAWEHVSTLARTLTAEELAELDAQHVLYRLFH
                     ETPPRVFEPETFESSCTCSRGKVSDMLLMLGGEEVGGVVAEQGSIEVDCDFCHSKYVF
                     DETDVNALFGEDVVGVAKGLPRHTVQ"
     gene            10076..10744
                     /locus_tag="ACFJAG_001320"
     CDS             10076..10744
                     /locus_tag="ACFJAG_001320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HFC3980596.1"
                     /translation="MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAED
                     EQPVLPVNRAPARRAGNADELIGNAMGLNEQPVLPVNRAPARRAGNADELIGSAMGLL
                     GIAYRYGGTSVSTGFDCSGFMQHIFKRAMGINLPRTSAEQARMGTPVARSELQPGDMV
                     FFRTLGGSRISHVGLYIGNNRFIHAPRTGKNIEITSLSHKYWSGKYAFARRVKKNDPS
                     RFLN"
     gene            10763..10981
                     /locus_tag="ACFJAG_001321"
     CDS             10763..10981
                     /locus_tag="ACFJAG_001321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980597.1"
                     /translation="MSMPEMPKWYGDDGQIVSCTEKVKVMSENMAELYQTAQDAFEDA
                     LLMGCGERQLRAYLLALIEGLENPYRKV"
     gene            11126..11470
                     /locus_tag="ACFJAG_001322"
     CDS             11126..11470
                     /locus_tag="ACFJAG_001322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CidA/LrgA family protein"
                     /protein_id="HFC3980598.1"
                     /translation="MNIIRALLIILGCLAAGETAVFLAGIKLPGSIVGMGVLFALLQA
                     GWVKTSWLQQLTDALMANLTLFLVPPCVAVISYLDLIADDWFSILVSASASTLCVLLV
                     TGKVHRWIRSII"
     gene            11470..12162
                     /locus_tag="ACFJAG_001323"
     CDS             11470..12162
                     /locus_tag="ACFJAG_001323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LrgB family protein"
                     /protein_id="HFC3980599.1"
                     /translation="MSEILRQPSVLLFLTLAVYALAIIVRTRTGNIFCNPVLVSTIVL
                     IAYLKILGIDYAAYHNAAQFIDFRLKPAVVVLAVPLYQNRRKIFNQWLPVIVSQLAGS
                     VTGIVTGMYFAKWLGAEREVVLPLASKSVTNPIAIEITRSIGGIPAITAATVIIAGLV
                     GQIAGYKMLKNTVVMPSSVGMSLGTASHAMGIAASLERSRRMAAYAGMGLTFNGVLTA
                     LIAPLLIPVLGF"
     gene            12229..13449
                     /gene="argJ"
                     /locus_tag="ACFJAG_001324"
     CDS             12229..13449
                     /gene="argJ"
                     /locus_tag="ACFJAG_001324"
                     /EC_number="2.3.1.1"
                     /EC_number="2.3.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004358 - glutamate N-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutamate
                     N-acetyltransferase/amino-acid acetyltransferase ArgJ"
                     /protein_id="HFC3980600.1"
                     /translation="MAVNLTEKTAEQLPDIDGIALYTAQAGVKKPGHTDLTLIAVAAG
                     STVGAVFTTNRFCAAPVHIAKSHLFDEDGVRALVINTGNANAGTGAQGRIDALAVCAA
                     AARQIGCKPNQVMPFSTGVILEPLPADKIIAALPKMQPAFWNEAARAIMTTDTVPKAA
                     SREGKVGDQHTVRATGIAKGSGMIHPNMATMLGFIATDAKVSQPVLQLMTQEIADETF
                     NTITVDGDTSTNDSFVIIATGKNSQSEIDNIADPRYAQLKELLCSLALELAQAIVRDG
                     EGATKFITVRVENAKTCDEARQAAYAAARSPLVKTAFFASDPNLGRLLAAIGYADVAD
                     LDTDLVEMYLDDILVAEHGGRAASYTEAQGQAVMSKDEITVRIKLHRGQAAATVYTCD
                     LSHGYVSINADYRS"
     gene            13509..14918
                     /locus_tag="ACFJAG_001325"
     CDS             13509..14918
                     /locus_tag="ACFJAG_001325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005247 - voltage-gated chloride channel
                     activity [Evidence IEA];
                     GO_process: GO:0006821 - chloride transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HFC3980601.1"
                     /translation="MTSTFPRRLARKIRQTRRLSRKSIAFLFLLAGSALVALTALFFA
                     HLADFALELNAKLVQQYPWFAWIALPPGLPVIVWLTRKFAPFTAGSGIPQVIASLSLP
                     YGAQKTRLIRLGQTLLKIPLTFLGMLFGASIGREGPSVQVGAAVMGAWGAWCKKHGLA
                     FKGMQENDLMAAGAAGGLAAAFNAPLAGVIFAIEELGRGIMLRWERQILLGVLAAGFI
                     QVAIQGNNPYFSGFNGGVLENILMWIVAAGLVCGAAGGIFARMLYRGAAAFAPRKIRG
                     FIRNRPLLLAALMGLLLALLGTFYQGKTYGTGYHEAAQALHGIYEAPVGLAAAKWLAT
                     VFSYWAGIPGGIFTPSLTIGAVLGEHIAAIADISQGANIIVLICMAAFLAGATQSPIT
                     SAVVVMEMTGGQSLLFWMLIACIFASQVSRQFSPRPFYHASGMRFRRRVLQETAAQTG
                     NAPARPQAANSKTGMPSEN"
     gene            15106..16497
                     /gene="hrpA"
                     /locus_tag="ACFJAG_001326"
     CDS             15106..16497
                     /gene="hrpA"
                     /locus_tag="ACFJAG_001326"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003724 - RNA helicase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase HrpA"
                     /protein_id="HFC3980602.1"
                     /translation="MFPDFSQTLSKDRHFLQSAFKNPNKYGGLSKIEEKYRKSHEIFL
                     KRLAALPKPEFDNTLPVHEKLEEIKKTVAENQVTIICGETGSGKTTQLPKICLELGRG
                     AAGLIGHTQPRRLAARSVAERIAEELKSEIGSAVGYKVRFTDHTSRDACVKLMTDGIL
                     LAETQTDRYLAAYDTIIIDEAHERSLNIDFLLGYLKQLLPRRPDLKVIITSATIDAER
                     FSRHFNGAPVLEVSGRTYPVEILYRPLTGKDEDDAEVELTDAIVDAADELARYGEGDI
                     LVFLPGEREIREAAEALRKSTLRRNDEILPLFARLSHAEQHKIFHPSGAKCRIVLATN
                     VAETSLTVPGIKYVIDTGLARVKRYSARAKVEQLHVEKISQAAARQRSGRCGRVSAGV
                     CIRLFSEEDFNSRPEFTDPEIVRSNLAAVILRMASLNLGDVAAFPFLEMPDSRYINDG
                     FQVLLELGAVEVV"
     gene            16565..>16956
                     /locus_tag="ACFJAG_001327"
     CDS             16565..>16956
                     /locus_tag="ACFJAG_001327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIR2 family protein"
                     /protein_id="HFC3980603.1"
                     /translation="MNIKEFMSNYTNHPVLFIGTGMSLRYLDNSYTWDGLLSKIAIDL
                     FGDDREYLNIKSRYCEDGRFQYEEIAEELQSKFDKVLENDPDGRFKEINDKFFENMRA
                     GNTLSRFKIYISTLLSQLNYKDNSNTELS"
BASE COUNT         3854 a         5068 c         4392 g         3642 t
ORIGIN      
        1 aaaacaaatg ccgtctgaaa gcctttcaga cggcatttcc attccaaacg ctcaaaccgc
       61 cgcgtccgaa cgttcgcccg tgcggatacg gattgcctcc tcgaccggca gcacaaaaat
      121 cttgccgtcg ccgattttgc ccgaacgcgc cacctcgaca atcacgtcaa tcgcgcgttc
      181 cacggcatca tccgccaaca ccaactcgat tttgaccttg ggcaggaaat cgacggcgta
      241 ttccgcaccg cgatagattt ccgtatgccc cttctgcctg ccgaaccctt tgacctcgct
      301 gacggtcatg cccgtaatgc cgatttccgt caacgcctcg cgcacgtcgt cgagcttgaa
      361 cggtttgaca atcgcctcga tttttttcat aaaatttcct ttgaacaaac aatacaaaca
      421 catccgaaaa acgggaaccc cccgtcagat tgtcaacatt ttaaaccaaa atacccaagc
      481 aatacagccc ccgttgcgca tataatgaca gcttttccaa ccgcatttga gagccgaatc
      541 catgtctgtt gttttgccct tgcgcggcgt taccgccctt tccgatttcc gtgtcgaaaa
      601 actcttgcaa aaagccgccg cactcggcct gcccgaagtc aaattaagca gcgaattttg
      661 gtatttcgcc ggcagcgaga aagcacttga tgccgcgact gtcgaaaaac tgcaagcctt
      721 gttggcggcg caaagcgttg aacaaacgcc cgaagcgcgc gagggtttgc atttgttttt
      781 ggtaacgccc cgtttgggta cgatttcgcc gtgggcttcc aaggcgacca atatcgcgga
      841 aaactgcggt ttggcaggca tcgaacgcat cgagcgcggt atggcggtgt ggctggaagg
      901 tgcgcttacc gatgaacaga aacagcaatg ggcggcgttg ctgcacgacc gcatgaccga
      961 atccgtgctg cccgattttc agacggcatc caaattattc caccatctca aatccgaaac
     1021 cttctccacc gtcgatgttt tgggcggcgg taaagaggct ttggtcaaag ccaataccga
     1081 aacgggtttg gcactctccg ccgacgaaat cgattatctg gttgaaaact atcaggcttt
     1141 gcagcgcaat ccgtccgatg tggagctgat gatgttcgcg caggcaaaca gcgaacactg
     1201 ccgccacaaa atcttcaacg ccgatttcat cctcaacggc gaaaaacaac cgaaatccct
     1261 gttcggcatg atacgcgaca cgcacaacgc gcatcccgaa ggtacggtcg tcgcctataa
     1321 agacaattcg tccgtgatca aaggcgcgaa aatcgagcgt ttctatccga atgcagcgga
     1381 aaaccaaggc taccgtttcc acgaggaaga cacccacatc atcatgaaag tggaaacgca
     1441 caaccacccg accgccatcg cgccgtttgc gggcgcggca acaggcgcgg gcggcgaaat
     1501 ccgcgacgaa ggtgcgacgg gcaaaggttc gcgtccgaaa gcgggcttga ccggctttac
     1561 cgtgtccaac ctcaacatcc ccgacctcaa acagccgtgg gaacaagact acggcaagcc
     1621 ggaacacatt tcctcgccgt tggacatcat gattgaaggc ccgattggcg gtgcggcgtt
     1681 caacaacgaa ttcggccgcc cgaacctctt gggctacttc cgcacctttg aagaaaaatt
     1741 tgacggtcag gttcgcggct accacaaacc gattatgatt gccggcggtt tgggcagcat
     1801 tcaggcgcag cagacgcaca aagacgaaat ccccgaaggc gcactgctga tccaactggg
     1861 cggcccgggc atgctcatcg gcttgggcgg cggtgcggct tcttcgatgg ataccggtac
     1921 aaatgatgcg tctttggact tcaactccgt acaacgcggc aaccctgaaa tcgaacgccg
     1981 cgcgcaggaa gtcatcgacc gctgctggca gctcggcgac caaaacccga ttatctccat
     2041 ccacgacgtg ggcgcgggcg gcttgtccaa cgctttccct gaattggtca acgatgccgg
     2101 acgcggcgcg gtattcgagc tgcgcgaagt gccgttggaa gaacacggtt taacgccttt
     2161 gcaaatctgg tgtaacgaat cgcaagagcg ttatatcttg tcgattttgg aaaaagattt
     2221 ggacaccttc cgcgccatct gcgaacgcga acgctgcccg tttgccgtag tcggcacggc
     2281 gaccgacgac ggtcatttga aagtgcgcga cgatttgttc tccaacaacc ccgtcgattt
     2341 gccgctgaac gtcttgctcg gcaaaccgcc caaaaccacg cgtaccgaca aaacggttac
     2401 gccgtccaaa aaaccgtttc acgcgggcga tatcgacatc accgaagccg cctaccgcgt
     2461 tttgcgcctg cctgccgtag ccgccaaaaa cttcctgatt accatcggcg accgcagcgt
     2521 cggcggcatg acccaccgcg accaaatggt cggcaaatac caaacccccg tagccgactg
     2581 cgccgttacc atgatgggct tcaacaccta tcgcggcgaa gcgatgtcta tgggcgaaaa
     2641 accggccgtc gccctgtttg acgcgcccgc ctcgggcaga atgtgcgtcg gcgaagccat
     2701 caccaacatc gcggcagtca acatcggcga catcggcaac atcaaacttt ccgccaactg
     2761 gatggcggcg tgcggcaacg aaggcgaaga cgaaaaactc taccgcaccg tcgaagccgt
     2821 ttctaaagcc tgccaggcat tggatttgag cattcccgta ggtaaagaca gcctgtcgat
     2881 gaaaaccgtg tggcaggacg gcgaagagaa aaaatccgtg gtttcgccgt tgagcctgat
     2941 tatttccgcg ttcgcgcctg ttaaagacgt gcgaaaaacc gttacgcccg aattgaaaaa
     3001 cgtcgaaggc agcgtattgc tgtttatcga tttgggcttc ggcaaagcgc gcatgggcgg
     3061 ctcggcgttc ggtcaggtgt acaacaacat gagcggcgac gcgcccgatt tggacgatgc
     3121 aggccgtctg aaagcgtttt acagcgtaat tcaacagctt gtcgccgaag acaaactttt
     3181 ggcgtatcac gaccgcagcg acggcggttt gtttgcgacg ctggcggaaa tggcgtttgc
     3241 ggcacggtgc ggtattagtg ccgatataga ttgcctgatg gataaattcc tgccgattca
     3301 tctcccggat tttcaaggcg accctgccga agacttatct gacgaacttt ataatcatgc
     3361 cgccattaaa atcttattca atgaagaatt aggcgcggtt atccaaatcc gccaaaaaga
     3421 tagggattat gttgatgcgg catttgaaac ggccggctta accgatgcgg tcagccggat
     3481 tggctctcct gattttgaca atgagtttat ttctttcttt ggttacggtt atttcttgga
     3541 acaaaaccgc gccgacctgc aacgcgcgtg gcaggaaacc agccacgcca tccaacgcct
     3601 gcgcgacaac cctgcctgcg ccgacagcga gttcgccctg attggcgaca acgaacgcag
     3661 cgcattgttt gccgacgtga agttcgacgt gaacgaagac atcgccgcgc cgtttatcaa
     3721 cagtggcgcg aaacctaaaa tcgccatcct gcgcgaacag ggcgtaaacg ggcaaatcga
     3781 aatggccgcc gccttcaccc gcgccggatt cgatgcctac gacgtgcata tgtccgacct
     3841 gatggctggc cgcttccgcc ttgccgactt caaaatgctg gcggcgtgcg gcggcttcag
     3901 ctacggcgac gtactcggcg cgggtgaagg ctgggcgaaa tccatcctgt tccaccctgc
     3961 cttgcgcgac caattcgccg ccttctttgc cgatccgaac acgctgacat tgggcgtgtg
     4021 caacggctgc caaatggtca gcaaccttgc cgaaattatc ccgggcgcag aaacatggcc
     4081 gaagttcaaa cgcaacctga gcgagcagtt tgaagcgcgc ctgaatatgg ttcacgtccc
     4141 caaatcagcg tcgctgattt tgaacgaaat gcaagactcc agcctgcctg tcgtggtcag
     4201 ccacggcgaa ggccgcgccg acttcgcgct tcacggcggc aatatttccg ccgatttggg
     4261 catcgcgctg caatatgtgg acggtcaaaa ccaggttacc caaacctatc cgctcaaccc
     4321 caacggctcg ccgcagggca tcgccggcat taccaacgcc gacggccgcg ttaccattat
     4381 gatgccccac cccgaacgcg tgtaccgtgc cgcacaaatg agccggaaac cggaaggctg
     4441 gacggaactg tccggctggt accgcctctt tgccggcgca cgtaaagcct tgggctaaac
     4501 cgtctgccca aacaaatgcc gtctgaaaaa ggttttgaaa cccgtttcag acggcatttt
     4561 gaccattctc aagccctgcc ggtactcaat cccgctttac cgttttcccg caaagttttc
     4621 agcaatactt tccacgccga caatttaggg ttggactgtt ttccttgtcc gatcaaatcc
     4681 atttgcgtca tataccagtt catttctaac attgcacccg cttttttatc aacaaatgct
     4741 acgccagttt ggatgcggtc tgcttgtacg gtttggtaag ttctgttttg cattttgttc
     4801 gccaaatcag ggactaaggc aaacgggcgg gctatgccga ccaaatccaa atgaccgctg
     4861 gataaggcat cttccatggc ggtttgcgaa cggaatccgc cggtgataat cagcggggct
     4921 tggctggctg cacgggcttt ttcggcgtaa tcgatgaaga aggcttcgcg tttgcgggtg
     4981 ctgtctttgg cggcgagcat ttgcgggctt tcgtagttgc caccggaaac ttcaataaaa
     5041 tcaatgccca tttccgacag tttttgcacc acctgcaccg attcgctttc gtcaaatccg
     5101 cctttttgga aatctgccga attgagtttt acgcccacca agaaatcttt gcccgcggca
     5161 gcgcgaatag cggtgtaggt ttccaaaagg aagcgcatac ggttttccaa actgccgccc
     5221 cattggtctt ggcggcggtt gtggtgcggc gagaggaatt ggctgatgag ataaccgtgt
     5281 acggcgtaaa tttgtacgcc tgaaaagcct gcctgttcgg caattttggc agtttgtacg
     5341 aattgctgaa tcagcccgtt gatttcatcg gcactcaatt cgcgcggcgg attgataaag
     5401 ccattcatgc ccaccagcgg cacggcgctc ggtgcaagcg gtgttttatt gaccaccgca
     5461 ggcgactgtt tgcccgcatg attgatttgc atgatgagca gcgtgtcgtt ttgcatgcgg
     5521 gctttcgccc attttttcag catttcaagg gcgcggtcgt ctgaaatcaa cacatcgttt
     5581 atcgaacctt tgccgctttc agccaccatc acattgcccg tcaccaaaac gcctgcgccg
     5641 ccttctgccc aagcgccgta caggcggaca agtttttcag acggctggtc gttttgggca
     5701 agttgctctt ccatggcgga tttgaagata cggtttttgg cggttttgcc gttttgaaaa
     5761 gtgaatggcg tgaataacat gatcgttcct ttaagttgat aagtttaaaa atgtaaacgt
     5821 atttgggtaa aaataaaggg ccaacggata accctatttt gaaagcgggc aattttgagc
     5881 catcaaatcg gcaagctgtt tcaatctcgc caccgcatcc gccatggcaa tactgtaaaa
     5941 ccgctctttg ccgacctgct ccaccgccac cgctccggct tgcagcatga tttttaaatg
     6001 gtgcgacaca gcagggcgcg acagatgcag atgctcggtc agctcattca cattcatcct
     6061 accgtgtttc cacaatacat gcaggatctg atggcggttt tcatcgctca atacggtaaa
     6121 aatgggtatg cactcgcgca ttaaattcat ggtttgttgc ggcatattcg atctattgag
     6181 tttatatatt taaaaattcg aacgtatttt agagggaagg tcggcagtta tcaaaggcag
     6241 tttggtttgc agtttggcaa tatattgttg ctgaaaggtt tttataagaa aaaatgccgc
     6301 ctgaaacagc atgatggcgt ttgctagggt tccgctgtat attaacgcct ttcggataca
     6361 cctttcagac ggcatccgaa ccatcaagga acactcatga aaattacccc cgtcaaagcc
     6421 ctgaccgaca actacatctg gatgatacag cacggcaacc atgccgtctg cgtcgatcct
     6481 tccgaaccct cgcccgtctt ggaattcctc gtacgcaacc gactcatgct cgcccaaacc
     6541 tgggtaacgc acccccatcc cgaccacgaa ggcggtgcgg cggcactctg gcgcggctac
     6601 atggaatcgc ccgtttacgg cgaatccgac atcgaagccg ccacccacac cgtaaccgcc
     6661 ggcacacgat tcaccttcgg caacggtcag gttaccgttt gggcaacacc cggccacaca
     6721 gaccgccaca ccagctacct tctcgaaact tcagacggca tacacgtttt ctgcggcgac
     6781 accctttttt ccgccggctg cggacgcgtg tttaccggca cggtcgaaca gctttacgac
     6841 aacttccaac ggttcaacca attacccgaa ggcaccctgt tctatccggc acacgaatac
     6901 accgccgcca acctgcgttt cgccgcccat atcgagccgg acaacgccga cattcagacg
     6961 gcattgaagg cggcggaaca cacgcccacc ctgcccgtta ccctcgcgca cgaacgccgc
     7021 gtcaacccgt tcttacggac agaaatcccc gccgtccgcc aacgtgccga agccctggtc
     7081 ggcaaaacgc tgaacagcgg tttggaagta ttcgccgccc tgcgcgaact gaaaaacgcc
     7141 taccgctgac ctgccctccg aaaaatgccg tctgaaaccc gcgtttcaga cggcatttgc
     7201 gttaaaaata gtaaaccgtt tcaaaaggga gtagaatagt gctgtttcca atcccgtgcc
     7261 tgatttttcg ggcttttatt atggaccttc ccagttcgtt tttactgaac accccttccg
     7321 attccaaacg acaataacca tcccgccgga atgcctcccc gcacacggcg ggcggagcat
     7381 ttatgagcat cgaacacact cctccgacac acgacggcga aaccggtcaa aaccatgccg
     7441 aacgcccttc cgccgatttc gaccgtgtcc actccctctg cgaaatcctc gaacctgctt
     7501 ttgaacaaat cgaaaacggc acaccgctcg aagatgcgcc gctgcgcgac aaactgaccg
     7561 agctgaccgt cctcttggcc gagttgcacc ctgccgacgt ggccgacgtc ttggagtccc
     7621 tgccgccgcg cgaacgcaat atcgtttggc ttctggtcaa acccgaagac gacggcgaag
     7681 tattgctgga agtatccgac gcggtgcgag aaacgctgat cgagtcaatg gacaaggacg
     7741 aattgttggc ggcggtcgat gatttggatg cggacgaatt ggcggagctg gcagacgatt
     7801 tgccgcacca agtggtttat gaagccttac agacgcgcga tgaggaagag cgcgcccaag
     7861 tcaaggcggc aatgtcgtat gaagacaacc aagtcggtgc gattatggac ttcgagttgg
     7921 tctgcatccg cgccgatgtc gcctgcgaag tggtgctgcg ttatctgcgc cgcttcgaca
     7981 gcctgcccga ccataccgac aagatttttg tcgtcgatga aaacgacgtg ctgcagggcg
     8041 tgctgcccat ccgcaaactt ttggtcgccg atcccgaaga tttggtggaa aacgtgatgg
     8101 cgaaagatgt cgtgcgtttc cgcgccgagg acgacgtgga agaagcggcg caggcgtttg
     8161 aacgctacga cttggttacc gcgcccgtcg ttgatgaaaa caaaaagctc atcggcagga
     8221 ttaccatcga cgagatggtg gacgtgatcc gcgaagaatc cgaagcggat atgttgaaca
     8281 tggcaggttt gcaggaagag gaagacctgt tcgcccccgt cttggattcc gtcaaaaacc
     8341 gctggatgtg gctcgccgtc aacctctgca ccgccttcct cgccagccgc gtcatcggcg
     8401 cgtttgaagg cagtatcgaa aaaatcgtcg cactcgccgc gctgatgccc atcgtcgccg
     8461 gcatcggcgg taactcgggc aaccagacga ttaccatgat tgtccgcgcg atggcgatgg
     8521 ggcagctgac ggatatgcag gcgggaaggc tgttgaaaaa agaagtcggc gtcgccttgg
     8581 tcaacggcat tatttggggg acggtgatgg gagcggtttc gtggctgctt tacggcagcc
     8641 tcggcatcgg tttggtcatg gttgccgcga tgacgctcaa cctcctgctg gcggcaacgg
     8701 tcggcgtatt gattcccgtg gtaatggaaa aattcggacg cgatcccgcg ctgggcagct
     8761 cggtgctgat taccgccgtt accgactccg gcggcttcct gattttcttg agtctcgcca
     8821 cgctgttcct gctttaaatg ccgtcccgac ccgcgcaaaa atgccgtctg aagcagaagc
     8881 tgcttcagac ggcattcgac cattcatcct tgttgctcaa gattattgga cggtatgtcg
     8941 gggcagccct ttggcaacgc cgaccacatc ctccccgaac agcgcgttga catcggtttc
     9001 atcaaacacg tatttgctgt ggcagaagtc gcaatcgact tcgatgctgc cttgttccgc
     9061 caccacgccg ccgacttctt ccccgcccag catcaacagc atatcgctga ccttgccccg
     9121 agaacaggta catgaggatt caaacgtttc cggctcgaac acgcgcggcg gcgtttcgtg
     9181 gaacaggcgg tataaaacgt gttgcgcgtc caattctgcc agctcctccg ccgtcagcgt
     9241 gcgcgccagc gtactgacgt gttcccatgc ctcttcatcc aacacctctt caggcagacg
     9301 ctgcaccagc agcccgcccg ccgcttcatc gcttgcagac agggcgatgt gcgtatcaag
     9361 ctgttcggaa cgtttcatat agttcaccaa catttgcgcg atgctgccgc cttccaaagg
     9421 cactacgccc tgccagggtt cgccgtcttt gggttgcagg gtcaatacga acacgccgtt
     9481 gccgcccaaa aggtcgccga ggctttcgtc atcggctatt tctgcggttt cgtcccaccg
     9541 cgcggttgca cggacggtac ggtcggaagt cgcttccgca accagcattt tcagttttcc
     9601 ctgcccctga acctgcacaa tcagcgtgcc ttcgttttta aggttgcccg acagcagaac
     9661 gccggcagcc agtagctctc ccaaggcgca gcggatggcg gcgggatagt ttttctgttt
     9721 tacaatgtgc tgccacacgt tttccagacg gacgtgcagc ccgcgcacgg gcatatcgtc
     9781 gaagataaag cgggtacgcg catcggcgcg gttgatggcg gtttgattca tgattttctc
     9841 tgactgattg ttcggatggc ggctatatgg ttgcggtcgg cgcgaaaaca aggcggacgg
     9901 cggatgcgct tcccaaattc tcaataaatt atataaaaat caacatatta actcaatcta
     9961 acaagccgtt ttttgccaaa cagccgtttt tttatataca atcaacaaga tattttcgac
    10021 tgatacagca taacatcgca cggcggcacg atgcctcctg cgcggaaaca ccgatatgga
    10081 ttcttttttc aaaccggcag tttgggcggt tttgtggctg atgtttgccg tccgccccgc
    10141 ccttgccgac gagttgacca acctgctcag cagccgcgag cagattctca gacagtttgc
    10201 cgaagacgaa cagcccgttt tacccgtcaa ccgagccccc gcccggcggg cgggcaatgc
    10261 cgacgaactc atcggcaacg cgatggggct taacgaacag cccgttttac ccgtcaaccg
    10321 agcccccgcc cggcgggcgg gcaatgccga cgaactcatc ggcagcgcga tggggctttt
    10381 gggtattgcc taccgctacg gcggcacatc ggtttctacc ggttttgact gcagcggctt
    10441 catgcagcac atcttcaaac gcgccatggg catcaacctg ccgcgcacgt cggcggaaca
    10501 ggcgcggatg ggtacgccgg ttgcccgaag cgaattgcag cccggggata tggtgttttt
    10561 ccgcacgctc ggcggcagcc gcatttccca tgtcggactt tatatcggca acaaccgctt
    10621 catccacgcg ccgcgcacgg ggaaaaatat cgaaatcacc agcctgagcc acaaatattg
    10681 gagcggcaaa tatgcgttcg cccgccgggt caagaaaaac gacccgtcac gctttctgaa
    10741 ctgatttccc aaggaatacg caatgagtat gcccgaaatg cccaaatggt acggcgatga
    10801 cggacagatc gtatcctgta ccgaaaaggt caaagtgatg tccgaaaata tggccgagct
    10861 gtatcagacg gcacaagacg cgtttgaaga cgcgctgctg atgggttgcg gcgaacggca
    10921 gttgcgcgct tacctgctcg cgctgattga aggtttggaa aatccctacc gcaaagtctg
    10981 aacacgcccc ggttgctgcg gcacggttta tccgtgccgt ttttgcgttt gtgcgcggct
    11041 tcggcttttc agacggcata tttgacgtta tgattaaaca gttaacaaga tttatcacaa
    11101 cgccgtcaaa agacagacac acaacatgaa catcatccgc gcgctcctca tcatcctcgg
    11161 ctgcctcgcc gccggcgaaa ccgccgtttt cctagcaggc atcaaactgc ccggcagcat
    11221 cgtcggcatg ggcgtgctgt ttgcgctttt gcaggcgggt tgggtcaaaa cgtcttggct
    11281 gcaacagctt accgacgcgc tgatggcaaa cctgacgctg ttcctcgtgc cgccctgcgt
    11341 ggcggtcatc agctatttgg atttgattgc cgacgattgg ttttcgatac tggtttccgc
    11401 ctccgccagc actttgtgcg tactgctggt tacgggcaag gttcaccgct ggatacggag
    11461 cattatctga tgagcgaaat cctcaggcag cccagcgttc tgcttttcct cacgcttgcc
    11521 gtgtacgcgc ttgcgattat cgtgcgcacg cgcacgggca atatcttctg caaccccgta
    11581 ctcgtcagca ctatcgtgct gattgcctac ctgaaaatcc tcggtatcga ttatgcggcg
    11641 taccacaacg ccgcgcaatt cattgatttt cggctgaaac ccgccgtcgt cgtgcttgcc
    11701 gtgccgctct accaaaaccg ccgtaaaatc ttcaaccagt ggctgcccgt catcgtttcg
    11761 cagcttgcgg gcagcgttac gggcattgtt acggggatgt attttgccaa gtggctgggc
    11821 gcggaacgcg aagtcgtcct cccgctcgcg tccaaatctg ttaccaaccc catcgccatc
    11881 gaaatcaccc gctccatcgg cggcattccc gccattaccg ccgccaccgt catcattgcc
    11941 ggtctggtcg gacagattgc cggttacaaa atgttgaaga acacggtcgt catgccctcg
    12001 tccgtgggta tgtcgctcgg cacggcttcg cacgcgatgg gcattgccgc ctcgctcgaa
    12061 cgcagccgcc gcatggcggc atacgcgggg atggggctga cgttcaacgg cgtgctgacc
    12121 gcgctgattg cgccgctgct tatccccgtt ttggggttct gaacccgttt cagacggcat
    12181 ttcaacccat gccgtctgaa cgccgacaca ctcgcaagga gaaccgttat ggctgtcaac
    12241 ctgaccgaaa aaaccgccga acaactgccc gacatcgacg gcattgccct ctacaccgcc
    12301 caagcaggcg tgaagaagcc cgggcatacc gacctgacac tgattgccgt agccgccggc
    12361 agcaccgtcg gtgcagtctt cacgaccaac cgtttctgtg ccgcgcccgt ccacatcgcc
    12421 aaatcgcacc ttttcgacga agacggcgtg cgcgccctcg tcatcaacac gggcaacgcc
    12481 aacgcgggta cgggcgcaca gggcagaatc gatgctttgg cagtgtgtgc cgccgccgcc
    12541 cggcaaatcg gctgcaaacc gaaccaggtg atgcccttct ccaccggcgt gattctcgaa
    12601 ccgctgcccg cagacaaaat catcgccgcc ctgcccaaaa tgcagcctgc cttctggaac
    12661 gaagcggcac gcgccatcat gaccaccgac accgttccca aagccgcctc gcgcgaaggc
    12721 aaggtcggcg accaacacac cgtccgcgcc acaggcattg ccaaaggctc gggcatgatt
    12781 catcccaata tggcgaccat gctcggtttc atcgccaccg atgccaaagt ttcccaaccc
    12841 gtcctccaac tgatgacgca ggaaatcgcc gacgaaacct tcaacaccat caccgttgac
    12901 ggcgacacca gcaccaacga cagcttcgtc atcatcgcca ccggcaaaaa cagccaaagc
    12961 gaaatcgaca acatcgccga cccgcgttac gcccaactca aagaattgtt gtgcagcctt
    13021 gcgctcgaac tcgcccaagc catcgtccgc gacggcgagg gcgcgaccaa gttcatcacc
    13081 gtccgcgtcg aaaacgccaa aacctgcgac gaagcccgcc aagccgccta cgccgcggca
    13141 cgttcgccac tggtcaaaac cgcctttttc gcctccgacc ccaacctcgg caggctgctc
    13201 gccgccatcg gttatgccga cgttgccgac ctcgataccg acctcgtgga aatgtatctc
    13261 gacgatattt tggttgccga acacggcgga cgcgccgcaa gctacaccga agcacaaggg
    13321 caggcggtga tgtcgaagga cgaaatcacc gtccgcatca agctgcatcg cggacaagcc
    13381 gccgccaccg tctatacctg cgacctgtcg cacggatacg tttccatcaa cgccgactac
    13441 cgttcctgac ccgacacggc ttcagacggc atacataaaa tgccgtctga accgtcggac
    13501 aacataccat gacctccaca ttcccccgcc gcctcgcccg caaaatccgc caaacccgcc
    13561 gcctgtcgcg caaaagcatc gcctttctgt tccttctggc aggttcggca ctcgtcgccc
    13621 tgaccgcact gttttttgcc catcttgccg attttgcgct ggaactgaac gccaaactgg
    13681 ttcaacaata cccgtggttc gcatggattg ccctgccgcc gggactgccc gtcatcgtct
    13741 ggctcacacg caaattcgcc cccttcaccg ccggcagcgg catccctcaa gtcatcgcct
    13801 cactgtcgct gccctacggc gcacaaaaaa cgcggctgat acgcctcggg caaacgctgc
    13861 tgaagattcc gctgaccttt ttgggtatgc tgttcggcgc gtccatcgga cgcgaaggcc
    13921 cgtccgtgca ggtcggcgcg gcagtaatgg gcgcgtgggg cgcgtggtgc aaaaaacacg
    13981 gtttggcgtt taagggtatg caggaaaacg atttgatggc ggcgggcgcg gcgggcggtt
    14041 tggcagcagc gttcaacgcg ccgctggcgg gcgtgatttt cgccattgag gaactggggc
    14101 gcggcatcat gctgcgctgg gagcggcaga ttctgctcgg cgtactcgcc gccggtttca
    14161 tacaggtcgc cattcagggc aacaacccgt atttttcggg tttcaacggc ggcgttttgg
    14221 aaaatatttt gatgtggatc gtggcggcgg ggctggtttg cggcgcggct ggcggcatat
    14281 ttgcccgtat gctctatcgc ggtgcggcgg cgtttgcacc gcgcaagata cgcggcttca
    14341 tccgcaaccg tccgctgctg ctggcggcac tgatggggct gctgctcgcc ctgctcggca
    14401 cgttctacca aggcaaaacc tacggcaccg gctaccacga agccgcccaa gccctgcacg
    14461 gcatctacga agcccccgtc ggactcgccg ccgccaaatg gctcgccacc gtattcagct
    14521 attgggcagg cattccgggc ggcattttca ctccctcgct gaccataggt gcggttttgg
    14581 gcgagcatat cgccgccatc gccgacatat cgcagggtgc aaacatcatc gtcctcatct
    14641 gcatggcggc atttttagcg ggcgcgacac aatcgccgat tacttccgcc gtcgtcgtca
    14701 tggaaatgac cggcgggcaa agcctgctgt tttggatgct gattgcctgc attttcgcct
    14761 cgcaggtttc gcgccagttt tcgccgcgtc cgttctacca cgcatcggga atgcgcttcc
    14821 gccggcgcgt gcttcaggaa accgccgccc aaaccggcaa tgcgcccgca agaccgcaag
    14881 ccgcaaacag caaaacggga atgccgtctg aaaattaaaa cgcccccgat caaacgccgg
    14941 cagccgcctt gattcaaata ccgttccgct gcgcttgaaa tttcagcaac aatgccgtct
    15001 gaacgacaga atgcggtttt cagacggcat ttccccatcc cgatattgct caaacaaaac
    15061 cgaagcgttt gctataattg cactttttac cgcacacgca cgcccatgtt tcccgatttc
    15121 tcccaaaccc tctccaaaga ccgccacttc ctgcaatccg ccttcaaaaa tcccaacaaa
    15181 tacggcggct tgtccaaaat cgaagaaaaa taccgaaaat cgcacgaaat cttcttgaaa
    15241 cgtttggccg cattgccaaa acccgaattc gacaacaccc tgcccgttca cgaaaaactc
    15301 gaagaaatca aaaaaaccgt tgccgaaaat caggtaacga ttatctgcgg cgaaaccggt
    15361 tcgggcaaaa ccacgcagtt gcccaagatt tgtttggaac tcgggcgtgg ggcggcagga
    15421 ttgatcgggc atacccagcc gcgccgtttg gccgcgcgtt cggtggcgga gcggattgcc
    15481 gaagagctga aatccgaaat cggcagcgcg gtcggctata aagtgcgctt taccgaccac
    15541 acctcgcgcg atgcctgcgt caagctgatg accgacggca tcctgctggc ggaaacccag
    15601 accgaccgtt atctcgccgc ctacgacacg attatcattg acgaagcgca tgaacgcagc
    15661 ctgaacatcg acttcctctt gggctaccta aaacaactcc tgccgcgccg ccccgatttg
    15721 aaagtcatca tcacatcagc caccatagac gcagaacgct tctcccgaca cttcaacggc
    15781 gcgcccgtac tggaagtgag cgggcgcacc tatcccgtcg aaatcctcta ccgaccgctg
    15841 accggcaaag acgaagacga cgcagaagtc gagctgaccg acgcgattgt cgatgccgcc
    15901 gacgaattgg cacgctacgg cgaaggcgat attttagtat tcctgccggg cgaacgcgaa
    15961 atccgcgaag cggcagaagc cctgcgcaaa tccacactgc gccgcaatga cgaaatcctg
    16021 cccctgtttg cacgcctgtc gcacgccgaa cagcacaaaa tcttccaccc ttcaggcgca
    16081 aaatgccgca tcgtgctggc gaccaacgtc gccgaaacct cgctcaccgt gccgggcatc
    16141 aaatacgtca tcgacaccgg cctcgcgcgc gtcaaacgct attccgcgcg ggcaaaagtg
    16201 gaacaacttc acgtagaaaa aatctcccaa gccgccgccc gccaacgctc cggccgctgc
    16261 ggacgcgtct cagcaggcgt gtgtatccga ctgttttcag aagaagattt taacagccgt
    16321 cccgaattta ccgatcccga aatcgtccgc agcaacctcg ccgccgtcat cctgcgcatg
    16381 gcatcgctga acttgggcga cgtagcagca ttcccgtttt tagaaatgcc cgattcgcga
    16441 tatatcaatg acggttttca ggtgttgctg gaattggggg cagtggaggt tgtctgaaaa
    16501 caggcagatc gggcgtttat gcccaacgag aaccttattg tcactattat tagggattaa
    16561 tacaatgaat ataaaagaat ttatgtctaa ctataccaac catcccgttc tctttattgg
    16621 aacaggtatg agtttgagat acttagataa ttcatatact tgggatggtt tattatctaa
    16681 aattgcaata gatttatttg gagatgatag ggaatatttg aacatcaaat cacggtactg
    16741 tgaagatggt agattccaat atgaagagat tgcagaggaa ttacaaagta aatttgataa
    16801 agttttagaa aatgaccctg atggtagatt taaagaaata aatgataagt tctttgaaaa
    16861 tatgagggcg ggaaacacct tgagcaggtt taagatttat atatccaccc tgctctcaca
    16921 attgaattat aaagataatt ctaatacaga attatc
//
LOCUS       DAXFZM010000050        16833 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.050, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000050 DAXFZM010000000
VERSION     DAXFZM010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16833)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16833)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16833
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.050"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(330..1259)
                     /locus_tag="ACFJAG_001328"
     CDS             complement(330..1259)
                     /locus_tag="ACFJAG_001328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HFC3980604.1"
                     /translation="MDSIIELRHLKTLLALEETGSVSLAAKRVFLTQSALSHQIRMLE
                     NHYGTPLFERKSTPLRFTPVGERLLRLAHELIPQVAVAERDLARITEGEAGELRIAVE
                     CHTCFDWLMPAMGEFRPMWPQVELDIVSGFQADPVGLLLQHRADLAIVSEAEKQSSIS
                     FHPLFAYEMVGICAPDHPLAAKNVWTAEDFIGETLITYPVPDEMLDLPKKILIPKNIN
                     PPRRHSELTIAIIQLVASRRGIAALPYWTVMPYLEKGYVVHRQITADGLQSKLYAAIR
                     TEDTDKSYLNNFCQIIRERGFADLPGLSELEPV"
     gene            1388..2137
                     /locus_tag="ACFJAG_001329"
     CDS             1388..2137
                     /locus_tag="ACFJAG_001329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0051540 - metal cluster binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HFC3980605.1"
                     /translation="MVLRRDFLAWCDETLQTASFKDYAPNGLQVEGREYIGKIVTSVT
                     ASRAAIDFAVEQKADLLLVHHGMFWKNELPTVTGWKKERIAALLRHDINMAGYHLPLD
                     VHPILGNNAQLADRLGFATEKRFGEQNLLNSGSLKQAKTLGALAAHIETVLQRKPVAI
                     GKPEREIRRVAWCTGGAQGFFQTAIDEGVDLYLTGEISEAQYHLANETGTAFISAGHH
                     ATERYGVRALAESAAEVFGLEVCHFDENNPA"
     gene            2260..2841
                     /gene="petA"
                     /locus_tag="ACFJAG_001330"
     CDS             2260..2841
                     /gene="petA"
                     /locus_tag="ACFJAG_001330"
                     /EC_number="7.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045275 - respiratory chain complex III
                     [Evidence IEA];
                     GO_function: GO:0008121 - ubiquinol-cytochrome-c reductase
                     activity [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome c reductase iron-sulfur
                     subunit"
                     /protein_id="HFC3980606.1"
                     /translation="MDNQEINNGRRRFLTLATCGAGGVAALGVATPFVASFFPSEKAK
                     AAGAAVEVDVSKIEAGQLLTAEWQGKPIWVLNRTDQQLKDLKGLNGELTDPNSDAEQQ
                     PEYAKNETRSIKPNILVAIGICTHLGCSPTFRPDIAPADLGADWKGGFFCPCHGSKFD
                     LAGRVYKGVPAPTNLVVPPYKYLSDTTILVGED"
     gene            2860..4209
                     /locus_tag="ACFJAG_001331"
     CDS             2860..4209
                     /locus_tag="ACFJAG_001331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bc complex cytochrome b subunit"
                     /protein_id="HFC3980607.1"
                     /translation="MANQTNSKAKALLGWMDARFPLSKMWNEHLAQYYAPKNFNFWYY
                     FGSLALLVLVIQIVSGIFLTMNYKPDGNLNAYHLPAAFTAVEYIMRDVSGGWIIRYMH
                     STGASFFFIVVYLHMFRGLIYGSYKKPRELVWIFGSLIFLALMAEAFMGYLLPWGQMS
                     FWGAQVIINLFSAIPVIGPDLSTWIRGDFNVSDVTLNRFFALHVIAVPLVLLGLVVAH
                     IIALHEVGSNNPDGVEIKKNKDENGIPRDGIPFHPYYTVKDILGVVVFLIVFCAVLFF
                     APEGGGYFLEAPNFDAANALKTPPHIAPVWYFTPFYAILRAIPSFLGTQVWGVIGMGA
                     AVVLIALLPWLDRGEVKSVRYRGPIFKTALVLFIISFIGLGILGAMVATDTRTLVARI
                     LSFVYFAFFLGMPFYTKLDKNKPVPERVTMSTAKQKIMFFVYVGITAVGAYLFATNI"
     gene            4224..5012
                     /locus_tag="ACFJAG_001332"
     CDS             4224..5012
                     /locus_tag="ACFJAG_001332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c1"
                     /protein_id="HFC3980608.1"
                     /translation="MKQAMKNWFAALLSAVPMGAAFASGGHAHYEKVDIDLRDQVSLQ
                     RGAQIFTNYCLSCHSASGMRFNRLKDIGLTDEEIKKNLMFTTDNVGDVMHSAMNPKDA
                     AKWFGAAPPDLTLIARSKGADYLYAYMRGFYKDPTRPSGWNNTVFDKVGMPHPLWEQQ
                     GVQAVELDAKGQPVMVKDEHGEMKPKLYWESTGLHSRRLPNGKVIQKEYDAYVRDLVN
                     YLVYMGEPAQLQRKRIGYVVMIFLFAVMLPLAYFLKKEYWKDVH"
     gene            5344..7134
                     /gene="rmuC"
                     /locus_tag="ACFJAG_001333"
     CDS             5344..7134
                     /gene="rmuC"
                     /locus_tag="ACFJAG_001333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HFC3980609.1"
                     /translation="MELMTVLLPLAALVSGVLFTWLLMKGRFQGEFAGLNAQLAEKAA
                     RCDFIEQAHAEIASELAALDGKYEHLQDENYALGNRFSAAEKQIAHLQEKEAESVRLK
                     QSYIDLQEKAQGLAVENERLATQLGQERKAFAEQYALERQIRQRVETDLEESRQTVRD
                     VQNDLSDVGNRFAAAEKQIAYLQEKEAEAERLRQSHTELQEKAQGLAVENERLATQIE
                     QERLASEEKLSLLGEARKSLSDQFQNLANTILEEKSRRFTEQNREQLHQVLNPLNERI
                     HGFGELVRQTYDKESRERLTLENELKRLQGLNAQLHSEAKALTNALTGTQNKVQGNWG
                     EMILETVLENSGLQKGREYVVQAASVRKEEDGGTRRLQPDVLVNLPDNKQIVIDSKVS
                     LTAYVRYTQAADADEAARELAAYIASIRAHMKGLSLKDYTDLEGVNTLDFVFMFIPVE
                     PAYLLALQNDAGLFQECFDKRIMLVGPSTLLATLRTVANIWRNEQQNQNALAIADEGG
                     KLYDKFVGFVQTLESVGKGIDQAQNSFQTAFKQLAEGRGNLVGRAEKLRLLGVKAGKQ
                     LQRDLVERANEQTAFALGKPSEQEAADEAE"
     gene            complement(7201..7833)
                     /locus_tag="ACFJAG_001334"
     CDS             complement(7201..7833)
                     /locus_tag="ACFJAG_001334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HFC3980610.1"
                     /translation="MTLRYEILPVTPFRQNCTLIWDDESGEAVLTDVGGDVPFLLQAL
                     ANRKLTLTAIWLTHGHLDHAGGVVEMLETHKVPVLGPHREDEFLLQSLPQTTAQYGFP
                     VSPAFAPNRWLEEGETLTVGRYAFQVLHIPGHTPGHIVFYCAEAELLIAGDVLFYETI
                     GRTDFPRGNHADLINNIRNKLFAFPETVQVVAGHGRMTSIGHEKRHNPFF"
     gene            7926..8750
                     /locus_tag="ACFJAG_001335"
     CDS             7926..8750
                     /locus_tag="ACFJAG_001335"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003910 - DNA ligase (ATP) activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase"
                     /protein_id="HFC3980611.1"
                     /translation="MIKKIIGGIIPIFTAVFIPASAGAADLMLAQEYKGQDIAGWAMS
                     EKLDGVRAYWDGKHLISRQGYAFTPPKGFTAQFPPYPLDGELYSGRGQFEQISATVRS
                     VSSDWRGIRLHVFDVPKAQGNLYQRLAVATQWLKTHPNAPITIIPQIKVRDRRHAMDF
                     LKQIEAQGGEGVMLRQPESRYSGGRSSQLLKLKSQYDDECTVTRHYEGKGRNAGRLGA
                     VGCKNRHGEFRIGSGFKDKDRDNPPKIGTLITYRYRGFTRKGTPKFATFVRVRTDR"
     gene            8819..9382
                     /locus_tag="ACFJAG_001336"
     CDS             8819..9382
                     /locus_tag="ACFJAG_001336"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine-guanine phosphoribosyltransferase"
                     /protein_id="HFC3980612.1"
                     /translation="MTDLETKRLETQAMLENADLLFDQGQCRAALQKVADEITRDLGD
                     KYPLLLPVMGGAVVFTGQLLPLLRFPLDFDYVHVSRYGDKLEGGAFNWKRMPDAEQIR
                     GRHVVVLDDILDEGHTMSAIQAKLLEMGAASCRAAVFANKLIDKEKPVKADYVGLDVP
                     NRYVFGYGMDAAGCWRNLGEIYALGGK"
     gene            9466..9903
                     /locus_tag="ACFJAG_001337"
     CDS             9466..9903
                     /locus_tag="ACFJAG_001337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1902495 - transmembrane transporter
                     complex [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HFC3980613.1"
                     /translation="MIGLLIITHETIGEAYRKLAHHFFPGGLPENVRILGVQPTEGQD
                     DIINNAISALQEFPENHGVLIMTDIFGATPCNAARRLVRENKSAILTGLNAPMMIKAV
                     QYSPAAEDLAAFTECVREAAVKGIFAITSAPEDLVCRRSGDAV"
     gene            10124..10393
                     /locus_tag="ACFJAG_001338"
     CDS             10124..10393
                     /locus_tag="ACFJAG_001338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HFC3980614.1"
                     /translation="MLKQSIEIINKLGLHARASSKFTQTASQFKSEVWVTKNGSRVNG
                     KSIMGLMMLAAAKGTVIELETDGLDEAAAMKALTDLINDYFGEGE"
     gene            10393..12168
                     /gene="ptsP"
                     /locus_tag="ACFJAG_001339"
     CDS             10393..12168
                     /gene="ptsP"
                     /locus_tag="ACFJAG_001339"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008965 - phosphoenolpyruvate-protein
                     phosphotransferase activity [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HFC3980615.1"
                     /translation="MSIVLHGVAAGKGIAVGCAHLIARGTEEVPQYDVAQADTDAEAE
                     RFDAAVKATRKELEQLRSAIPENAPTELGAFISLHLMLLTDVTLSREPVDILREQKIN
                     AEWALKQQSDKLAAQFDNMDDAYLRERKQDMLQVVRRIHNNLIGQGNELEVADNLFDE
                     TVLIANDLSPADTVLFKEQRIAAFVTDAGGPTGHTAILGRSLDIPSVVGLHNARKLIT
                     EGETVIVDGINGVLIISPDESVLNEYRRRAREYRSHKRDLNKLKKTAAATADGVCIEL
                     VGNIESAEDVKPLHNLGADGIGLFRSEFLYLNRDTMPSEDEQYEVYSAIVKKMKGKSV
                     TIRTVDLGVDKNPRWFGKNSTPNGSLNPALGMTGIRLCLAEPVMFRTQMRAILRAAVH
                     GPVRMMWPMITSVSEVRQCLIHLDTAQRQLAERGDAFGEVGIGCMIEIPSAALTVGSI
                     LKLVDFISVGTNDLIQYILSVDRGDDSVSHLYQPGHPSVLKMLQHVIRTANRMDKDVS
                     VCGEMAGDTAFTRVLLGMGLRRFSMNPNNILPVKNIILHSNAGQLEGDIAKVIRCEDE
                     EKSEKLIKQINSVSVAEEAEVKGRK"
     gene            complement(12295..13236)
                     /locus_tag="ACFJAG_001340"
     CDS             complement(12295..13236)
                     /locus_tag="ACFJAG_001340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HFC3980616.1"
                     /translation="MLELNGLCKCFGGKTVADNICLTVGRGKILAVLGRSGCGKSTLL
                     NMIAGIVRPDGGEIRLNGENITCMPPEKRRISLMFQDYALFPHMSALENTAFGLKMQK
                     MPKAEAERLALSALAEVGLENEAHRKPEKLSGGEKQRLALARALVVRPSLLLLDESFS
                     SLDTHLRDRLRRMTAERIRKGGIPAVLVTHSPEEACTAADEIAVMHEGKILQCGTPET
                     LIQTPAGVQVARLMGLPNTDDDRHIPQNAVCLDNHGTECRLLSLVRLPDSLRLSAVHP
                     EHGELTLNLTVGQHTDGISGNGTVRIRVDEGRIVRFR"
     gene            complement(13245..14120)
                     /locus_tag="ACFJAG_001341"
     CDS             complement(13245..14120)
                     /locus_tag="ACFJAG_001341"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HFC3980617.1"
                     /translation="MPTVRFTESVSKQDLDALFERAKASYGAESCWKTLYLNRLPLGN
                     LSPEWAERIKKDWEAGCSESSDGIFLNADGWPDMGGRLQHLARTWNKAGLLHGWRNEC
                     FDLTDGGGNPLFTLERAAFRPFGLLSRAVHLNGLVESNGRWHFWIGRRSPHKAVDPGK
                     LDNIAGGGVSGGEMPSEAVCRESSEEAGLDKTLFPLIRPVSRLHSLRPVSRGVHNEIL
                     YVFDAVLPETFLPENQDGEVAGFEKMDIGGLLDAMLSKNMMHDAQLVTLDAFYRYGLI
                     DAAHPLSEWLDGIRL"
     gene            complement(14303..14379)
                     /locus_tag="ACFJAG_001342"
     tRNA            complement(14303..14379)
                     /locus_tag="ACFJAG_001342"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(14343..14345),aa:Met,seq:cat)
     regulatory      14528..14627
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            14718..16619
                     /gene="thiC"
                     /locus_tag="ACFJAG_001343"
     CDS             14718..16619
                     /gene="thiC"
                     /locus_tag="ACFJAG_001343"
                     /EC_number="4.1.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HFC3980618.1"
                     /translation="MTTPKKTAKISGNEARELSDLSEDIGIRFKYPNSERVYLQGSRD
                     DIRVPLREIRQDDTYTAQGTEANPPIPVYDTSGAYGDPAAHIDLKQGLPHIRTAWLDE
                     RGDTEILPKLSSEYGIERAHDPKTAHLRFNQITRPRRAKAGRNVTQLHYARQGIITPE
                     MEFAAIRERMKLDELFRRPEYAKLLKQHTGQSFGANIPTRPDQITPEFVRQEIAAGRA
                     IIPANINHPELEPMIIGRNFRVKINGNLGNSAVTSSLTEEVEKMVWSLRWGADTIMDL
                     STGAHIHETREWIIRNAPVPIGTVPIYQTLEKTGGIAEDLTWDLFRDTLIEQAEQGVD
                     YFTIHAGVLLRYVPMTANRLTGIVSRGGSIMAKWCLAHHRENFLYTHFDEICEIMKAY
                     DVSFSLGDGLRPGCIADANDESQFAELHTLGELTDKAWKHDVQVMIEGPGHVPLQRVK
                     ENMTEELQHCFEAPFYTLGPLVTDIAPGYDHITSGIGAANIGWYGTAMLCYVTPKEHL
                     GLPDKEDVRTGIITYKLAAHAADLAKGWPGAQLRDNALSKARFEFRWRDQFRLSLDPE
                     RAESFHDETLPAEGAKIAHFCSMCGPKFCSMKITQEVRDYADKQKAQRQGMEEKAVEF
                     VKKGAKIYS"
BASE COUNT         4063 a         4388 c         4666 g         3716 t
ORIGIN      
        1 tctttataaa aagaaagaat aaaacatcga taaatccctt ttcctccctc ttgtagaata
       61 atatattttt gataggtgtt tattaaatag tcttctaact ctcttatgga gttataagga
      121 tatttcgtta atctcattat tttgctccat gtctaaaacg tcctgttgat ccatatattt
      181 cacccgttat gagtctgttc ccatctcata tagtttcaag tttaacaacc ccttgaggct
      241 atgttaaaag agtttctcta ataactattc cgttttctta aatataaaaa aatagaaaaa
      301 tagcccgggt atagtttgaa caagggaaat cagaccggtt ccaactcact taatccgggc
      361 aagtccgcga agccgcgttc acgtatgatt tggcaaaagt tgttcagata acttttatct
      421 gtgtcttcag tgcggatggc ggcatacagt ttgctttgca gtccgtcggc agtaatttga
      481 cggtggacga catagccttt ttcaaggtag ggcatgactg tccaataggg aagggcggca
      541 atgccacgtc tgctggcaac cagttggata atggcgatgg tcagctcgct gtgtcggcgc
      601 ggcgggttga tgtttttcgg aatcaggatt tttttgggta aatccagcat ctcgtcggga
      661 acgggatagg taatcagggt ttccccgata aagtcttccg ccgtccaaac gtttttggcg
      721 gcaagcggat ggtccggggc gcaaatgccg accatttcgt aggcaaacag tgggtggaag
      781 ctgatgctgc tttgtttttc ggcttcggag acaatggcga ggtcggcgcg gtgttgcagc
      841 agcagcccga cgggatccgc ttggaatcct gatacgatat ccagttcgac ttggggccac
      901 atcgggcgga attcgcccat ggcgggcatc agccagtcga aacaggtatg gcattcgacg
      961 gcaatccgca gctctcccgc ctccccttcc gtgattcgcg ccaaatctcg ttctgcaaca
     1021 gcaacttgag gtatcagttc gtgggcgagg cgcagcagcc tttcgcccac cggggtaaag
     1081 cgcaggggcg tggatttgcg ttcgaacagc ggcgtgccgt agtggttttc gagcatacgg
     1141 atctggtggg aaagggcgga ttgggtaagg aaaacccgtt tggcggcaag ggagacgctg
     1201 ccggtttctt caagtgccag cagggttttg aggtggcgca attcgataat ggaatccatg
     1261 gggcttcaga cggcatattg aaccggcgca tattaaaata attcatatgc gggtgcaaat
     1321 cggaaaaatg ggcgtttcgg gcatttgcgg ttagaatgcc cgcttgtttg gaaatgacag
     1381 gaaaaatatg gttttgcgca gagatttttt agcctggtgc gacgaaacgt tgcagacggc
     1441 atcgtttaaa gattacgccc ccaatggttt gcaggttgaa gggagggaat atatcgggaa
     1501 aatcgttacg tcggtaacgg caagcagggc agcgattgat tttgctgtgg agcagaaggc
     1561 agatttgctt ttggtacatc acggtatgtt ctggaaaaac gagctgccga ccgttaccgg
     1621 ttggaaaaaa gaacggattg ccgcactgtt acggcacgac atcaatatgg caggctacca
     1681 tctgcccctg gatgtgcatc ccatactggg caacaatgcc caactcgccg acagattggg
     1741 ttttgcgaca gaaaaacggt tcggcgaaca aaacctgctc aactcgggca gcctgaaaca
     1801 agccaagaca ctcggcgcat tggcggcgca tattgaaaca gttttgcaac gtaagcctgt
     1861 cgccatcggc aaacccgaac gcgaaatccg acgggtcgca tggtgtaccg gcggtgcaca
     1921 gggctttttt cagacggcaa tagatgaagg cgtcgatctg tatctgacgg gtgaaatttc
     1981 cgaagcccaa taccacctcg ccaatgaaac gggtacggct ttcatttcgg cagggcatca
     2041 cgcgacggaa cgttacggcg tacgcgcgct ggcagaatcg gcggcagagg ttttcgggtt
     2101 ggaagtgtgc cattttgacg aaaacaaccc ggcttgagtc ttgagaaata tcataaaact
     2161 ttaccttatt ttaaataatg ctttgagtat cactgcaaac tgggtaaaat tgcaatgttt
     2221 aatggctcgg cattcccaaa atattaggac gactgaataa tggataatca agaaatcaac
     2281 aacggccgcc gccgtttcct gacacttgcg acctgcggcg caggcggagt ggcagcattg
     2341 ggtgtggcaa cgccgtttgt ggccagtttt ttcccttcgg aaaaagccaa ggccgccggt
     2401 gctgccgtcg aagtggatgt cagtaaaatc gaagcgggtc agctgctgac cgccgagtgg
     2461 caaggcaaac cgatttgggt gctcaaccgt acagatcagc agcttaaaga cctgaaaggc
     2521 ctgaacggcg aacttaccga tcccaattcc gatgcggaac agcagccgga gtatgctaaa
     2581 aacgagaccc gttcgattaa gccgaacatc cttgtcgcca tcggtatctg cacccatttg
     2641 ggctgctcgc ccaccttccg tcccgacatt gcccccgccg atttgggtgc agactggaaa
     2701 ggcggcttct tctgcccctg ccacggttcg aaattcgact tggccggccg cgtatataaa
     2761 ggtgttcctg ccccgaccaa cctggttgtc ccgccatata aatacttgag cgacacaact
     2821 atcttggtgg gcgaagacta agaataagga acgataatta tggcaaacca aaccaatagc
     2881 aaagcaaaag cattgttagg ctggatggac gctcgcttcc ccctgtctaa aatgtggaat
     2941 gagcatttgg cgcaatacta tgcgccgaaa aactttaatt tttggtacta tttcggctct
     3001 ttagccctgc tcgtcctcgt gattcaaatc gtcagcggta ttttcctgac gatgaactac
     3061 aaaccggacg gcaacctgaa tgcctaccat ctgcctgctg cctttaccgc agtagagtac
     3121 atcatgcgcg acgtgtccgg cggttggatt atccgctaca tgcactccac cggcgcatct
     3181 ttcttcttca ttgttgttta tctgcacatg ttccgtggtt tgatttacgg ttcatataaa
     3241 aaaccgcgcg aattggtgtg gattttcggt tctttgatct tcttggcatt gatggcggaa
     3301 gcctttatgg gctacctgct gccttggggt cagatgtcct tttggggtgc gcaggtgatt
     3361 atcaacctgt tctccgccat tcccgtcatc ggtcctgatt tgtccacttg gattcgcggc
     3421 gacttcaacg tttccgacgt taccctgaac cgcttcttcg ccctgcacgt tatcgccgta
     3481 ccgctggtat tgctcggttt agtcgtggca cacatcatcg cactgcacga agtgggctct
     3541 aacaaccccg acggtgtgga aatcaagaaa aacaaagatg aaaacggcat tccgcgcgac
     3601 ggcatcccgt tccaccctta ctacactgtt aaagacatcc tgggcgtcgt tgtattcctg
     3661 attgtcttct gtgccgtatt gttctttgcc cctgaaggcg gcggctactt cctggaagcg
     3721 ccgaacttcg atgcggcaaa tgcgctgaaa acacccccgc acattgcgcc ggtatggtat
     3781 ttcacaccgt tctacgccat tttgcgtgcg attccttcct tcttgggaac gcaggtttgg
     3841 ggtgtaatcg gtatgggcgc ggcggtcgtg ttgattgccc tgctgccttg gctggatagg
     3901 ggcgaggtga aatccgtccg ttaccgcggt ccgattttca aaaccgcatt ggtcttgttc
     3961 atcatttcct ttatcggttt gggtattttg ggcgcgatgg tggcaaccga tacgcgtact
     4021 ttggtcgcgc gcatcctgtc cttcgtctat ttcgcattct tcctgggtat gccgttctat
     4081 accaagctgg ataaaaacaa accggttccc gaacgcgtaa ccatgagcac cgccaaacaa
     4141 aaaatcatgt tctttgttta cgtcggcatt accgccgtgg gtgcttacct gtttgcaacc
     4201 aacatctgat gagggcagtc aaaatgaaac aagctatgaa aaattggttt gctgccttgc
     4261 tgtcggcagt acccatgggt gcggcatttg cttcgggcgg tcatgcacac tatgagaaag
     4321 tcgatatcga tttgcgcgac caagtaagct tgcagcgcgg cgcacaaatc tttaccaact
     4381 attgcctgtc ctgccactcg gcaagcggta tgcgtttcaa ccgtttgaaa gacatcggtc
     4441 tgactgatga agaaatcaag aaaaacctga tgtttaccac cgataatgtc ggcgatgtca
     4501 tgcattcggc gatgaacccg aaagatgcgg caaaatggtt tggtgctgct ccgcccgatt
     4561 tgacattgat tgcgcgttcc aaaggtgcag actaccttta cgcttatatg cgcggcttct
     4621 ataaagatcc gacccgtccg agcggctgga acaatactgt attcgataaa gtcggtatgc
     4681 cccacccgtt gtgggaacag caaggcgttc aagccgttga gttggatgcc aaaggtcagc
     4741 cggttatggt aaaagacgaa cacggcgaga tgaagcctaa gctgtattgg gaatctaccg
     4801 gtttgcacag ccgccgtctg cctaacggca aagtgatcca gaaagagtac gacgcatatg
     4861 tacgcgattt ggtcaattac cttgtgtaca tgggcgaacc tgcacaactg caacgcaaac
     4921 gtataggcta tgtcgtgatg attttcctat ttgcggttat gctgcctttg gcgtatttcc
     4981 tgaaaaaaga atattggaaa gacgtacact aagcgtttgg aacaaaaggg caaatccttt
     5041 agggtttgcc cttttttcat tttgcctgcc gtttgaaaag cctgaatccg tatgccgtct
     5101 gaacatagct gcaacatttc agacggcatc attctaaaaa tgtcaggcat cgggaactta
     5161 atcagggttt gtggcagatt gatattgaat taggaaaagg tctgaaaccg caagcagcat
     5221 ggtaaggcga tgtcgaacag gtttaaagcc aatccgctat attttttgga gctgcaccgt
     5281 gcaaacaggt agaatggcgg cggttttgtc cggtgtgaaa atgtttgaat attaggatga
     5341 ttgatggagc tgatgactgt tttgctgcct ttggcggcgt tggtgtcggg cgtgttgttt
     5401 acatggttgc tgatgaaggg caggtttcag ggcgagtttg ccggtttgaa cgcgcaattg
     5461 gcggaaaagg cggcaagatg tgattttatt gaacaggcac acgcagaaat tgcatcagaa
     5521 ttggccgctt tggatgggaa atacgagcat ttgcaggacg aaaattatgc tttgggcaac
     5581 cgtttttccg cagccgaaaa gcagattgcc catttgcagg aaaaagaggc ggaatcggtt
     5641 cggttgaagc agtcgtatat cgatttgcag gaaaaggcgc agggtttggc ggttgaaaac
     5701 gaacgtttgg caacgcagct cgggcaggaa cggaaggcgt ttgccgagca atatgcgctg
     5761 gaacgccaaa tccgccaaag agtcgaaacc gatttggaag aaagccgcca aactgtccgc
     5821 gacgtgcaaa acgacctttc cgatgtgggc aaccgttttg ccgccgccga aaaacagatt
     5881 gcctatttgc aggaaaaaga ggcggaagcg gagcggttga ggcagtcgca taccgagttg
     5941 caggaaaagg cgcagggttt ggcggttgaa aacgaacgtt tggcaacgca aatcgaacag
     6001 gaacgccttg cttctgaaga aaagctgtcc ttgctgggcg aggcgcgcaa aagcttgagc
     6061 gatcagtttc aaaatcttgc caacacgatt ttggaagaaa aaagccgccg ttttaccgag
     6121 cagaaccgcg agcagctcca tcaggttttg aacccgttga acgaacgcat ccacggtttc
     6181 ggcgagttgg tcaggcaaac ttatgataaa gaatcgcgcg agcggctgac tttggaaaac
     6241 gaattgaaac ggctccaagg gttgaatgcg cagctgcaca gcgaggcaaa ggccctgacc
     6301 aacgcgctga ccggcacgca gaacaaggtt cagggcaatt ggggcgagat gattctggaa
     6361 acggttttgg aaaattccgg ccttcagaaa gggcgggaat atgtggttca ggcggcatcc
     6421 gtccgaaaag aggaagacgg cggcacgcgc cgcctccagc ccgacgtttt ggtcaacctg
     6481 cccgacaaca agcagattgt cattgattcc aaggtttcgc tgacggctta tgtgcgctac
     6541 acgcaggcgg cggatgcgga tgaggcggca cgcgaactgg cggcgtatat cgccagcata
     6601 cgcgcgcata tgaaaggctt gtcgctgaag gattacaccg atttggaagg tgtgaacaca
     6661 ttggatttcg tctttatgtt tatccctgtc gaaccggcct acctgctggc gttgcagaat
     6721 gacgcgggct tgttccaaga gtgtttcgac aaacggatta tgctggtcgg ccccagtacg
     6781 ctgctggcga ctttgcggac ggtggcgaat atttggcgca acgagcagca aaaccaaaac
     6841 gcgctggcga ttgcggacga aggcggcaag ctgtacgaca agtttgtcgg cttcgtacag
     6901 acgctcgaaa gcgtcggcaa aggcatcgat caggcgcaaa acagctttca gacggcattc
     6961 aagcaacttg ccgagggacg cgggaatctg gtcggacgcg ccgagaaact gcgtctgttg
     7021 ggcgtgaagg caggcaaaca gcttcaacgg gatttggtcg agcgtgccaa cgaacagacg
     7081 gcatttgctt tgggcaaacc ttcggaacag gaagcggctg acgaagccga ataggaaagg
     7141 cggatgcgtt tcagacggca tcggggcagg ggatgccgtc tgaagacttt gggaagtcgg
     7201 ttagaaaaac ggattgtgcc gtttttcgtg tccgatggaa gtcatacgcc cgtgtccggc
     7261 gacaacttgc acggtttcgg ggaaggcgaa taatttgttg cggatattat tgattaagtc
     7321 ggcgtggttg ccgcgcggaa aatcggtcct gcctatggtt tcgtaaaaca acacgtcgcc
     7381 cgcaatcagc aattccgcct cggcacaata aaagacgata tgtcccggcg tatggcccgg
     7441 aatatgcagc acttgaaagg catagcgtcc gaccgtgagc gtttcgcctt cttcgagcca
     7501 acggttcggc gcaaaggcgg gcgagacggg gaatccgtat tgcgcggtgg tttgcggcag
     7561 cgattggagc aggaattcat cttcgcggtg cgggccgagg acggggactt tatgcgtttc
     7621 cagcatctcg accacgccgc ccgcgtgatc gagatgaccg tgcgtcagcc agattgccgt
     7681 gagcgtgagt ttgcggtttg ccaacgcttg cagcaggaac ggcacgtcgc cgccgacatc
     7741 ggtcaggacg gcttcgccgc tttcgtcgtc ccaaatcagg gtgcagtttt ggcggaaggg
     7801 ggtaacgggg agaatttcgt aacgtagggt catcggcgtg ttcctaaaac ggtttttcag
     7861 acggcatcgg gtttgccgtt tgttttatgg cggtttgccg cctgttttga tattggggga
     7921 atcaggtgat taagaagata atcggcggca tcataccgat ttttacggcg gttttcatcc
     7981 ctgcatcggc aggcgcggcg gatttgatgc tggcgcagga atacaaaggg caggacattg
     8041 ccggctgggc gatgagcgag aagctcgacg gcgtgcgcgc gtattgggac ggaaagcacc
     8101 tgataagccg tcagggttat gcgtttacgc cgcccaaagg ctttaccgcg cagtttccgc
     8161 cttatccttt ggacggcgaa ttgtatagcg ggcgcggtca gttcgagcag atttccgcta
     8221 ccgtgcgttc tgtttcttca gactggcgcg gtatccgcct gcacgttttc gacgtaccca
     8281 aggcgcaggg caacctctac caacgtttgg cagtcgcaac gcagtggctg aaaacgcatc
     8341 cgaacgcgcc gattaccatc atcccgcaaa tcaaagtgcg cgaccggcgg cacgcgatgg
     8401 actttttaaa acaaatcgaa gcgcagggcg gcgaaggcgt gatgctgcgt cagcccgaat
     8461 cccgttacag cggcggcagg agcagccaat tattgaagct gaaaagccaa tacgacgacg
     8521 aatgcacggt aacgcggcac tatgagggca aagggcgaaa cgccggacgg ctgggcgcgg
     8581 tcggctgcaa aaaccgacac ggcgaattcc gcatcggcag cggtttcaag gacaaagacc
     8641 gcgacaaccc gcccaaaatc ggcacgctga ttacctaccg ttaccgtggc tttacgcgga
     8701 aaggcacgcc gaaatttgcc acatttgtgc gcgtgcgtac cgaccgttga gcaggacggc
     8761 tcggacggca tccgatactt tggtttataa ttttcctttt accgaccgat tccgacatat
     8821 gaccgattta gaaaccaaac gccttgaaac acaggcgatg cttgaaaacg ccgatctttt
     8881 gttcgaccaa ggccaatgcc gtgccgcact gcaaaaagtg gcggacgaga ttacgcgcga
     8941 tttgggggat aaatatccgt tgctgctgcc cgtgatgggc ggcgcggtgg tgtttacggg
     9001 gcagttgctg ccgctgttgc gttttccctt agattttgat tatgttcacg tttcccgtta
     9061 cggcgacaag ctggagggcg gcgcgttcaa ctggaagcgt atgcccgatg cggaacaaat
     9121 ccggggcagg cacgtggtcg tgttggacga tattttggac gaagggcata cgatgtccgc
     9181 cattcaagcc aaacttttgg aaatgggtgc ggcaagctgc cgtgcggcgg tgttcgccaa
     9241 taaattaatc gacaaagaaa aaccggtcaa agccgattat gtcggactgg atgtgccgaa
     9301 ccgttatgtt ttcggttacg gcatggatgc ggcaggctgc tggcgcaatc tgggcgagat
     9361 ttacgcattg ggcggaaaat aagggatgcg atgccgtctg aaggcctttc agacggcatc
     9421 gcgcccatac gccggcagga ttaatgagga acaggacgca tcaatatgat agggctttta
     9481 atcatcacac acgaaaccat aggcgaagcc taccgcaagc tggcgcatca tttttttccg
     9541 ggcgggctgc ctgaaaacgt ccgcatactc ggcgtgcagc cgacggaagg ccaagacgac
     9601 attatcaaca acgccatttc cgcgctgcaa gagtttcctg aaaaccacgg tgtattgatt
     9661 atgaccgaca tcttcggcgc gaccccctgc aatgccgccc gccggctcgt gcgcgaaaac
     9721 aaatcggcga ttttgaccgg gctgaacgcg ccgatgatga ttaaggccgt ccaatattcg
     9781 ccggcggcgg aagaccttgc cgcctttacc gaatgcgtca gagaggcggc ggtaaaaggc
     9841 attttcgcca tcacgtccgc gcccgaagat ttggtgtgcc ggcgcagcgg cgatgccgtc
     9901 tgaagaagcg gcagggcagg aaaacatttt aaacggcgtc tgctgccgat atatagcgga
     9961 ttaacaaaaa tcaggacaag gcggcgggcc gcagacagta cggatagtac ggaaccggtt
    10021 cgcccggtgc ttcagcacct tggagaatcg ttccctttga gccaaggcgg ggcaacgccg
    10081 tactggtttt tgttaatcca ctatacataa cacgggaacc gaaatgctca aacaatccat
    10141 cgaaatcatc aacaaactcg gactccacgc ccgcgcgtcc agcaagttca cccaaaccgc
    10201 gtcccaattc aaaagcgaag tctgggttac gaaaaacggc agccgcgtca acggcaaaag
    10261 cattatgggg ctgatgatgc tcgcagccgc caagggtacg gtcatcgaac tggaaaccga
    10321 cggcttggac gaagccgcag ccatgaaggc attgaccgac ttaatcaacg actacttcgg
    10381 cgagggcgaa taatgagtat cgtgctgcac ggcgtggcgg cgggcaaagg cattgccgtc
    10441 ggttgcgccc acctgattgc gcgcggtacg gaggaagtgc cgcagtatga tgttgctcag
    10501 gcggacaccg atgccgaagc cgaacgtttc gatgccgccg tcaaagccac gcgcaaagag
    10561 ttggaacagc tccgcagcgc gattcccgaa aacgccccga ccgagttggg cgcgttcatc
    10621 tcgctgcacc tgatgctctt gaccgatgtt accttgtcgc gcgaacccgt cgatatttta
    10681 agggaacaaa aaatcaacgc cgagtgggca ttgaagcagc agagcgacaa actcgccgcc
    10741 caattcgaca atatggacga tgcctatttg cgcgaacgca agcaggatat gctgcaagtc
    10801 gtccgccgca tccacaacaa cctgatcggg cagggcaacg agttggaggt tgccgacaac
    10861 ctgtttgacg aaaccgttct gattgcaaac gacctttcac ccgccgacac ggttttgttt
    10921 aaagagcagc gcattgccgc cttcgttacc gatgccggcg gccccaccgg gcatacggcg
    10981 attttgggca ggagcttgga catcccgtcc gtcgtcgggc tgcacaacgc gcgcaaactg
    11041 attaccgaag gcgaaacggt catcgtggac ggcatcaacg gcgtgttgat tatttcgccg
    11101 gatgagtcgg tgttgaacga ataccgccgc cgcgcccgcg aataccgcag ccacaaacgc
    11161 gatttgaaca agctcaaaaa aaccgccgcc gccaccgccg acggggtctg catcgagctt
    11221 gtgggcaata tagaatccgc cgaagacgtg aaaccgctgc acaacctcgg cgcagacggc
    11281 atcgggctgt tccgcagcga gtttctttac ctgaaccgcg atacgatgcc gtctgaagac
    11341 gagcagtacg aagtgtacag cgcgattgtc aaaaaaatga agggcaaaag cgtaacgata
    11401 cggacagtcg atttgggtgt ggacaaaaat ccgcgctggt tcgggaaaaa cagcacgccc
    11461 aacggcagcc tcaaccccgc gctgggcatg accggcatcc gcctgtgcct tgccgaaccg
    11521 gtcatgttcc gcacgcagat gcgcgccatc ctccgtgcgg cggtacacgg ccccgtccgc
    11581 atgatgtggc cgatgattac ctccgtatcc gaagtgcgcc agtgcctcat ccacctcgac
    11641 accgcgcaac gccagcttgc cgaacgcggc gatgccttcg gcgaagtcgg catcggctgc
    11701 atgattgaaa ttccgtctgc cgcgctgacc gtcggcagta ttttgaaact ggtcgatttc
    11761 atctccgtcg gtaccaacga tttgatccaa tatattctgt ccgtcgatcg cggcgacgac
    11821 agcgtcagcc atctctacca acccggacat ccttccgtgc tgaaaatgct gcaacacgtc
    11881 atccgtaccg ccaaccgcat ggacaaagac gtgtccgtat gcggcgagat ggcgggcgat
    11941 accgcgttta cccgcgtttt attgggtatg gggctgcgcc gtttttccat gaatccgaac
    12001 aacatcctgc ccgtcaaaaa catcattctg cacagcaatg ccggacagct cgaaggcgat
    12061 attgcgaaag tcatccgctg cgaagacgaa gagaagtcgg aaaagctgat caaacagatc
    12121 aacagcgtgt ctgtcgcgga agaagccgaa gtcaagggac ggaaataaat attgttgaca
    12181 atgcgagcgg gttgcagtca aataacgccc ttaaaaaata cagctgcttt ggtcaagaaa
    12241 tgccgtctga aaaattttca gacggcattt tgtttggcag gcatttctgc cgcatcatcg
    12301 gaaacggacg atacgccctt catcgacgcg gatgcggacc gtaccgtttc cggaaatacc
    12361 gtccgtatgt tgtccgacag tcaggtttaa ggtcagctcg ccgtgttcgg gatggacggc
    12421 ggaaagccgg agcgagtcgg gcaggcggac gagggacagc agacggcatt ccgttccatg
    12481 attgtccaag cacacggcat tttgcggaat atggcggtca tcgtcggtat tgggcagccc
    12541 catcagacgg gcgacctgca cgccggcagg cgtttgaatc aaggtttcgg gcgtaccgca
    12601 ttgaaggatt ttcccctcgt gcatgacggc gatttcgtcc gccgccgtgc aggcctcttc
    12661 gggcgaatgc gttaccaaaa cggcagggat gccgcccttg cggatgcgtt cggcggtcat
    12721 acggcgcagc cggtcgcgca aatgcgtgtc caaactggaa aacgattcat ccagcaacag
    12781 cagggaaggg cggacaacca aagcgcgcgc cagtgccaac cgttgcttct cgcctccgga
    12841 aagtttttca ggcttgcggt gcgcctcgtt ttccagcccg acttcggcaa gtgccgacaa
    12901 ggcgaggcgt tcggcttcgg ctttcggcat tttttgcatt ttcaaaccga atgccgtatt
    12961 ttccagcgca ctcatatggg gaaacagcgc gtaatcttga aacatcagcg agatacggcg
    13021 tttttcgggc ggcatacagg taatgttttc cccgttcagc cgaatttcgc cgccgtccgg
    13081 ccggacgatg cccgcaatca tattcagcag ggtggatttg ccgcagcccg accgccccag
    13141 tacggcgagt attttgccgc gcccgacagt caggcagatg ttgtcggcga ccgttttgcc
    13201 gccgaagcat ttgcagagtc cgttcagttc aagcatggcg catcctataa acgtatgccg
    13261 tccagccact cggacagcgg atgggcggca tcaatcagac cgtaacggta aaacgcgtcc
    13321 agcgtaacca gttgcgcgtc gtgcatcatg tttttcgaca acatggcatc caataggccg
    13381 ccaatgtcca tcttttcaaa acccgctacc tcgccatcct gattttcagg caggaaggtt
    13441 tcgggcagga cggcatcgaa cacatacagg atttcattgt gcacacctcg gctgacgggg
    13501 cgaaggctgt gcagccgcga tactgggcgg atgagcggaa acagcgtttt atccaaaccg
    13561 gcttcttcgc tgctttcgcg gcacacggct tcagacggca tttcgccgcc ggaaacaccg
    13621 ccgccggcaa tattgtcgag cttgccggga tcgactgctt tgtgcggact gcgcctgcct
    13681 atccaaaaat gccatctgcc gttcgattcg accaaaccgt tgagatggac ggcgcggctg
    13741 agtagtccga acggacggaa agcggcgcgt tcgagcgtga acaaggggtt gccgccgccg
    13801 tcggtcaggt cgaaacactc gttgcgccat ccgtgaagca gccccgcctt gttccatgtg
    13861 cgggcgaggt gctgcaagcg tccgcccata tccggccagc cgtccgcatt cagaaaaatg
    13921 ccgtctgaag actcggagca gcctgcctcc cagtcttttt tgatgcgctc agcccattcc
    13981 ggcgacagat tgcccaaagg aagacggttc agatacagcg ttttccagca actttcggca
    14041 ccgtaacttg cttttgcccg ctcgaacagg gcatcaaggt cttgtttgct gacggattcg
    14101 gtaaaacgga cggtcggcat agccggcttt cttgaacaca atgcggaaga ttgtagccaa
    14161 accgcctgaa tttgcaaccg caaacagacg gcggcctgcc gttccgatat tgcggcagga
    14221 aggaaaatcc ggcaaaaaac ggaggcggca ggaaacagga aaaacaaaac cccctcggca
    14281 ttgaaccgag gggtttgata tttggttgcg ggagcaggat tcgaacctac gaccttcggg
    14341 ttatgagccc gacgagctac catgctgctc catcccgcgt cagaagatga aactatacgg
    14401 cagatttttt atgttgtcaa acattatttc cgtgaaaaat cataaagttt tccgtccggc
    14461 ggcttatgcc tgatttgaaa tatcattttc tttacaaaag ttcatgttcg tgatttaatt
    14521 ttggttaaca tcgaaacagg ggtgctgcct gatgttcagg cggctgagaa atacccttta
    14581 cacccgatcg ggataatacc tgcgtgggga gttttcacgg attctgtctt tcagacggca
    14641 ttggttttca aatgccgtct gaaaacgcaa aacgctcctg tttctttatt ctaaacgaga
    14701 aaacaggagc attttttatg actacgccaa aaaaaaccgc caaaatttcc ggcaacgaag
    14761 cgcgcgaact ttccgacttg agcgaagaca tcggcatccg cttcaaatat ccgaactccg
    14821 aacgcgtgta tctgcaaggc agccgcgacg acatccgcgt acctttgcgc gaaatccgtc
    14881 aggacgacac ctacacggcg caaggtacgg aagccaaccc gcctattccg gtgtacgaca
    14941 ccagcggcgc atacggcgat ccggcggcgc acatcgacct gaaacaaggc ctgccgcaca
    15001 tccgcacggc gtggctggac gaacgcggcg ataccgaaat cctgcccaag ctctccagcg
    15061 aatacggcat cgaacgtgcg cacgatccga aaaccgccca tctgcgcttc aaccaaatca
    15121 cccgcccgcg ccgtgccaaa gccggccgca atgtaaccca gcttcactac gcgcgccaag
    15181 gcattatcac gcccgaaatg gagttcgccg ccatacgcga acgcatgaag ctggacgagc
    15241 ttttcagacg gcctgaatac gccaagctct tgaaacagca cacagggcaa agtttcggtg
    15301 cgaacatccc gacccgtccc gaccaaatca cgcccgaatt cgtgcgccaa gaaatcgccg
    15361 ccggccgcgc gatcatcccc gccaacatca accaccccga actcgaaccg atgattatcg
    15421 gccgcaactt ccgcgtcaaa atcaacggca acttgggcaa ttccgccgta acctccagcc
    15481 tgaccgaaga agtcgaaaaa atggtgtggt cgctgcgttg gggcgcggac acgattatgg
    15541 acttatccac aggcgcgcac atccacgaaa cgcgcgaatg gattatccgc aacgcgcccg
    15601 tccccatcgg cacagtgccg atttaccaaa ctttggaaaa aaccggcggc atcgccgaag
    15661 atttgacttg ggatttgttc cgcgacacct taatcgagca ggcggaacaa ggcgtggact
    15721 atttcaccat acacgcgggc gtgttgctgc gttatgtgcc gatgaccgcc aaccgcctca
    15781 ccggcatcgt atcgcgcggc ggttcgatta tggcgaaatg gtgtttggca catcatcggg
    15841 aaaacttcct ctacacgcat ttcgacgaaa tctgcgaaat catgaaggcg tatgacgtat
    15901 cgttcagctt gggcgacggc ctgcgccccg gctgcattgc cgatgccaac gacgaatccc
    15961 aattcgccga attgcacacc ttgggcgaat tgaccgataa agcgtggaaa cacgacgtac
    16021 aagtcatgat cgaaggcccc ggccatgtgc cgctgcaacg cgtcaaagaa aatatgaccg
    16081 aagagttgca acactgcttt gaagcaccgt tttacacact cggcccgctc gttaccgaca
    16141 tcgcccccgg ctacgaccac atcacttcgg gcataggcgc ggccaatatc ggctggtacg
    16201 gcacggcgat gctttgttac gttaccccca aagaacattt ggggctgccc gacaaagaag
    16261 acgtgcgcac cggcatcatc acctacaaac tcgccgccca cgccgccgac ctcgccaaag
    16321 gctggccggg cgcgcaatta cgcgacaacg ccctgagcaa ggcgcgtttc gaattccgct
    16381 ggcgcgacca attccgctta agcctcgacc ccgaacgcgc cgagagcttc cacgacgaaa
    16441 ccctgcccgc cgaaggcgcg aaaatcgccc atttttgctc aatgtgcggc cccaaatttt
    16501 gctcgatgaa aatcacgcag gaagtgcgcg actacgccga caagcaaaaa gcccaacggc
    16561 agggtatgga ggaaaaagcg gtcgagttcg tcaaaaaagg cgcgaagatt tacagttgaa
    16621 acgtcaagca aaaaatgccg tctgaagccc ggaaaaaagg cttcggacgg cattctttcg
    16681 cttgtgaaaa tgattaaaca accgatcatt aaagtaattt ttaaaatttt tatattcaca
    16741 tagatgggaa tgatgggatt tagggttctg attttgtttt gagagaatga aggaatttga
    16801 gattgtgggc gattatcggg aaaaatagaa tct
//
LOCUS       DAXFZM010000051        16692 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.051, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000051 DAXFZM010000000
VERSION     DAXFZM010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16692)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16692)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16692
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.051"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..684)
                     /locus_tag="ACFJAG_001344"
     CDS             complement(<1..684)
                     /locus_tag="ACFJAG_001344"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HFC3980619.1"
                     /translation="MNHFKKQQIQNIADFNPREQLAKGALAKSVPMAMLKEFQRQITG
                     YEIKAFNGGAKFRNGDTLLAKITPCLENGKTAFVDILDDGEVAFGSTEFIVLRAKNET
                     NPEFLYYFAISPDFRKRAIECMEGTSGRQRVNENALKTLELPIPEPQIQQSIAAVLSA
                     LDKKIALNKQINTRLEEMAKTLYDYWFVQFDFPDANGKPYKSSGGDMVFDETLKREIP
                     KGWGSIELQS"
     gene            complement(734..964)
                     /locus_tag="ACFJAG_001345"
                     /pseudo
     CDS             complement(734..964)
                     /locus_tag="ACFJAG_001345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004143539.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacid dehydrogenase"
     gene            complement(1014..4019)
                     /locus_tag="ACFJAG_001346"
     CDS             complement(1014..4019)
                     /locus_tag="ACFJAG_001346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease"
                     /protein_id="HFC3980620.1"
                     /translation="MSQTHNENSRVKIPAVLHLMRLGYDYLSLKNANWDRQTNIFPEI
                     FVDSLCRINPDLPPDDARRLLADIRLELDNEDLGQKFYERLTNQSGGKKLIDFQNFDN
                     NSFHVVTELPCINGDEAFRPDIALLVNGMPLVFIEVKKPNNKGGIGEERERMGKRAKN
                     PKFRRFINITQFMIFSNNMEYDDGATEPAQGAFYASSACGKPVFNYFREEHKLNLTEL
                     LDTLSDDLENNVLQDNNLPVIKHSPEFISNKSPDTPTNRILTSLLCRERLSFLLQHGL
                     TYVKASQGLVQKHIMRYPQLFATLAIEKHLANGGKKGVIWHTQGSGKTALAYYNTRYL
                     THYYAKQGIVPKFYFIVDRLDLLKQAQREFTARDLVVHTIDSREAFVADIKSAQTLHN
                     HAGKAEITVVNIQKFQDDPDVVARNDYDLAIQRVYFLDEVHRSYNPKGSFLANLNQSD
                     VNAVKIGLTGTPLIGVTAGNVNTRELFGDYIHKYYYNASIADGYTLRLIREEIGSRYK
                     AQLQEALAQLEIEKGSFDRKEIYAHPHFVHPMLDYILDDFAKFRKTNQDESLGAMVVC
                     DSAEQARQLFEHFQTASDHNFTAALILHDVGTKEERDQWVKDFKAGKTDILFVYNMLL
                     TGFDAPRLKKLYLGRLIKAHNLLQTLTRVNRTYKSYRYGYVVDFADIEREFDKANRAY
                     WDELSNELGDEIGSYSQLFKTAEEIEQEIADIKNALFDFDTENAEEFCSQISQIEDKK
                     QLLALKKALQTAKELYNILRLQGSHEFFAHLDFDKLNLLYRETAARLDTLNLAEKLQQ
                     GDTAHLLNEALEDVYFQFVKIGEAELKLADDLKDIMRKVREGLAGNFDQDDLEYISLR
                     EELERIFKKKNLAEVGQEEMQTNIATLETVYAKIKELNRQNDLLRHKYGGDAKYARIH
                     KRLMENAALYGDKLKVFNALSGVKTDADQKVLDMEQILDNQNYFEKQMQGIVLKRFRT
                     EQQFPVQPADIQAINRLLVREYLKESGRI"
     gene            complement(4139..5449)
                     /locus_tag="ACFJAG_001347"
     CDS             complement(4139..5449)
                     /locus_tag="ACFJAG_001347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HFC3980621.1"
                     /translation="MTDLFVREPDAPLAERLRPHTLDDVIGQQHLIGEGKPLRVAVEG
                     GKPHSMLLWGPPGVGKTTLARILAQSFNAQFLPVSAVFSGVKDIRGAIDKAEIALQQG
                     RATILFVDEVHRFNKAQQDAFLPHVESGLLTFIGATTENPSFEVNPALLSRAQVYVLQ
                     SLSSDDLKKLIAKVLALPEYRDFTIEADVQELLVNTADGDARRLLNLLEQLLRAADTR
                     RLKILTTEFLADSLGAQIRRFDKGGESFYNQISALHKSVRGSHPNAALYWFCRMLDGG
                     TDPRYLARRIVRIAWEDIGLADPRAFQIANDAAATFERLGSPEGELALAQAVLYLAAA
                     AKSNAGYKAYNQMRRFVKENASDEVPVHLRNAPTKLMKELGYGREYRYAHDEPNAYAA
                     GESYMPDGLDEPDFYQPVPRGLEIKIGEKLAWLKSLDEEALKAK"
     gene            5646..5947
                     /locus_tag="ACFJAG_001348"
                     /pseudo
     CDS             5646..5947
                     /locus_tag="ACFJAG_001348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714068.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            6095..6691
                     /locus_tag="ACFJAG_001349"
                     /pseudo
     CDS             6095..6691
                     /locus_tag="ACFJAG_001349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260097.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter"
     gene            6752..9369
                     /locus_tag="ACFJAG_001350"
                     /pseudo
     CDS             6752..9369
                     /locus_tag="ACFJAG_001350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706192.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
     gene            9685..9879
                     /locus_tag="ACFJAG_001351"
                     /pseudo
     CDS             9685..9879
                     /locus_tag="ACFJAG_001351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_063514830.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            complement(9900..10816)
                     /locus_tag="ACFJAG_001352"
                     /pseudo
     CDS             complement(9900..10816)
                     /locus_tag="ACFJAG_001352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255891.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
     gene            11071..12535
                     /locus_tag="ACFJAG_001353"
                     /pseudo
     CDS             11071..12535
                     /locus_tag="ACFJAG_001353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217121.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3360 family protein"
     gene            12786..13154
                     /locus_tag="ACFJAG_001354"
     CDS             12786..13154
                     /locus_tag="ACFJAG_001354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980622.1"
                     /translation="MNKTLSILPAAILLGGCAAGGNTFGSLDGGTGMGGRIVKMTVES
                     QCRAELDRRSEWRLTALAMSAEKQAEWENKICGCATEEAPNQLTGNDVMQMLNQSTRN
                     QALAALTVKTVSACFKRLYR"
     gene            13227..14636
                     /gene="thrC"
                     /locus_tag="ACFJAG_001355"
     CDS             13227..14636
                     /gene="thrC"
                     /locus_tag="ACFJAG_001355"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004795 - threonine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HFC3980623.1"
                     /translation="MRYISTRGETAHKPFSEVLLMGLAPDGGLMLPEHYPQIGRETLD
                     KWRGLAYPELAFEIMCLFVTDIPEDDLRDILNRTYTEAAFGTKEITPVRTLSDGIKIQ
                     ALSNGPTLAFKDMAMQFLGNAFEYVLNKEGKKLNILGATSGDTGSAAEYALRGKKGVN
                     VFMLSPDGKMSAFQRAQMYSLQDGNIHNIAVKGMFDDCQDIVKAVQNDAAFKEKYHIG
                     TVNSINWGRIVAQVVYYFAGYFNATSSNDETVSFCVPSGNFGNVCAGHIAKQMGLPVR
                     CLIVATNENDVLDEFFKTGAYRPRNSAHTYVTSSPSMDISKASNFERFVFDLMDRDPQ
                     EINTLWAEVAAGKGFDLRFALDKVGGKYGFTSGKSTHADRLATIRQVYEQDKELIDPH
                     TANGVKVAREVREAGETVVCLETALAAKFDATIREAVGDVAIPRPAALEGLENLPQRV
                     QTVPNSADAVKGIIEQTLA"
     gene            14683..15477
                     /locus_tag="ACFJAG_001356"
     CDS             14683..15477
                     /locus_tag="ACFJAG_001356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980624.1"
                     /translation="MTLPMQETRFSILLDELAAKQEATIAPYLLADGTKVWVRKAGRH
                     NARWRYALLGMVARYLKLGVLKPVPSLGGEPAIATESKRLYELRSAGIAVPELLALRK
                     NALMFGNLEGIPLDTQIRQEAEAGKADAWLAGLEAIARVHKKRQFLSQAFARNMMWDG
                     KNISFLDFEDDPSEVLTIAQCQARDWLCYIHSTALILKNGGLLEAAAEKWGGVLSDQP
                     AEIQKLIAGTVKPILPIRRLEHPRWGRDALRLAASISLISLADMPP"
     gene            15665..16441
                     /locus_tag="ACFJAG_001357"
     CDS             15665..16441
                     /locus_tag="ACFJAG_001357"
                     /EC_number="1.18.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004324 - ferredoxin-NADP+ reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP reductase"
                     /protein_id="HFC3980625.1"
                     /translation="MAAFNTQKVLSVHHWTDAYFTFTCIRDESLRFENGQFVMVGLMA
                     DGKPLMRAYSVASANWEEHLEFFSIKVQDGPLTSRLQHLKVGDEVLISKKPTGTLVAC
                     DLNPGKHLYLLSTGTGIAPFLSITKDPEIYEQFEKIILVHGVRYKKDLAYYDRFTKEL
                     PEHEYLGDLVKEKLIYYPIVSREEFEHRGRLTDLMVSGKLFEDIGLPKINPQDDRAML
                     CGSPAMLKDTCKVLDDFGLTVSPKTGVRGDYLIERAFVDQ"
BASE COUNT         4239 a         3881 c         4322 g         4250 t
ORIGIN      
        1 agattgtaat tctatacttc cccacccctt cggaatttcc cgtttcaagg tttcgtcaaa
       61 caccatgtcg ccgcctgagg atttgtaggg cttgccgttg gcgtcgggga aatcgaactg
      121 cacaaaccag tagtcgtaca gggttttcgc catctcttcc aggcgcgtgt tgatttgttt
      181 gttcagggcg atttttttgt ccaaagcgga taggacggcg gcgatggatt gttggatttg
      241 aggttctgga ataggcaact ccagtgtttt taatgcattt tcattgacac gttgcctgcc
      301 ggaagttcct tccatacatt caatcgctcg ttttctaaaa tcgggactga ttgcaaaata
      361 atagagaaat tcgggattgg tttcattttt tgctcttaac acgataaatt cggtagaacc
      421 gaaagccact tctccatcat ctaaaatatc tacaaaagcg gttttcccat tttccaaaca
      481 cggggtaatc ttagctaata aggtatcacc attgcgaaac ttagctccac cgttaaatgc
      541 cttgatttcg taacccgtaa tttgtcgttg aaattctttc aacattgcca tcggaacact
      601 ttttgccaat gctcccttgg ctagttgctc tctcggatta aaatcagcaa tattttgaat
      661 ttgttgtttc ttaaaatgat tcatgatgtt ccgttacaaa actcttcaaa ggccgtctga
      721 aaaaaacatt tcatcggtag ttcttgccgt ctgcggcagt tgtaaactga aagtttacaa
      781 ctgaatcgtc cagttcttgt tctgcaaata tggctttgat gtgtttaccg atgttttgtt
      841 tgctggtttg gtagagttcg gcaatttctt tttgggtaag ccatagttcg ccgtcaagct
      901 cgcgcagggt aaattcggat agtccgtctt ccgtggtgta gatgatgatg tcgttgttgt
      961 gcatagcttt cctgtattta taaatggtta aggctaccta aaaaacctct ttctcaaatc
     1021 cgcccgcttt cttttaaata ttcccgcacc aacaggcggt tgatggcttg gatgtctgca
     1081 ggctgaacag gaaattgctg ttccgttcta aagcgtttta atacgatgcc ttgcatttgt
     1141 ttttcaaagt aattttggtt gtccaaaatc tgctccatat ccagcacttt ttggtcggca
     1201 tcggttttta caccgcttag cgcgttaaag actttgagtt tgtctccgta gagggcggcg
     1261 ttttccatca accgcttgtg gatacgtgcg tatttggcgt cgccgccgta tttgtgccgt
     1321 aagaggtcgt tttggcggtt cagctctttg attttggcat agacggtttc gagtgtggcg
     1381 atgtttgtct gcatttcttc ttgcccgact tcggcgaggt tctttttctt gaagatgcgt
     1441 tccagctctt cgcgcaggct gatgtattca aggtcgtctt ggtcgaagtt gcccgccagc
     1501 ccttcgcgca ctttgcgcat gatgtctttt aaatcgtcgg caagtttgag ttccgcctcg
     1561 ccgattttga cgaattgaaa gtaaacgtct tccagcgctt cattgagcaa atgggcggtg
     1621 tcgccttgct gtaatttttc ggcaaggttt aaggtatcca agcgggcggc ggtttcgcgg
     1681 tacaaaagat tgagcttgtc aaaatccaga tgcgcaaaaa attcgtggct gccttgcagg
     1741 cgcaggatgt tgtacaactc tttggcggtt tgcagggctt tttttaaggc tagaagctgt
     1801 tttttgtctt ctatttggct aatttggctg caaaattctt cggcgttttc ggtatcgaaa
     1861 tcaaacaggg cgtttttaat gtctgcaatt tcctgttcga tttcttcggc ggttttgaat
     1921 agctggctgt aactgccgat ttcgtcgccc aattcgttgg aaagttcgtc ccaataggcg
     1981 cggttggctt tgtcaaattc gcgttcgata tcggcaaaat cgacgacata gccgtagcgg
     2041 taagatttgt aggtgcggtt gacgcgggtc agggtttgta aaaggttatg ggcttttatc
     2101 agtctgccca aatagagctt tttcaggcgc ggcgcgtcaa agccggtcaa aagcatgttg
     2161 tacacaaaca agatgtcggt tttgcccgct ttgaaatctt taacccattg gtcgcgttct
     2221 tccttagtgc cgacgtcgtg caatatcaac gcggcggtga aattgtggtc tgaggccgtc
     2281 tgaaaatgct caaaaagctg gcgtgcctgt tctgcgctgt cgcaaacgac catggcaccg
     2341 aggctctcgt cttggttggt ttttctgaat ttggcgaagt cgtccaagat gtagtcaagc
     2401 atcgggtgga cgaagtgcgg atgggcgtag atttctttgc ggtcaaagct gcctttttcg
     2461 atttcaagtt gcgccagtgc ttcttgtaat tgcgccttgt atcggctgcc gatttcttcg
     2521 cgtatcaggc gcagggtgta gccgtcggca atggaggcgt tgtaatagta tttgtggatg
     2581 tagtcgccga agagttcgcg ggtgttgacg ttgcctgcgg ttacgccgat aagcggcgtg
     2641 ccggtcagcc cgattttgac ggcgtttacg tcggactgat taaggttggc aagaaatgag
     2701 cctttggggt tgtagctgcg gtgtacttcg tcgagaaaat agacgcgctg aatggcgagg
     2761 tcgtagtcgt tacgggcgac gacatcgggg tcgtcttgga atttttggat attaacaaca
     2821 gtgatttccg ctttgcctgc gtggttgtgc aaagtttggg cggatttgat gtcggcaacg
     2881 aaggcttcgc ggctgtcgat ggtatggacg actaaatcgc gggcagtaaa ttcgcgctgc
     2941 gcctgtttca ataaatcaag cctgtccacg atgaaataga atttcggcac gatgccctgt
     3001 ttggcataat agtgggtcag gtagcgggtg ttgtaatagg caagcgcggt tttgccagag
     3061 ccttgggtgt gccaaatcac gccttttttg ccgccgtttg ccaaatgttt ttcaatggca
     3121 agggtggcaa atagctgcgg ataccgcatg atgtgttttt gcaccaagcc ttgacttgct
     3181 ttgacgtaag tcagcccgtg ttgcagaaga aaagaaagac gttcgcggca aagcagcgaa
     3241 gtcaggatgc ggttggtcgg cgtatcgggc gatttattgc tgataaattc ggggctgtgt
     3301 ttgataacgg gcaggttgtt gtcttgtaga acgttgtttt caaggtcgtc tgaaagcgtg
     3361 tccaataatt cggtaaggtt taatttatgc tcttcgcgga agtagttgaa tacgggcttg
     3421 ccgcaagcag acgaggcgta aaacgcgcct tgtgccggct cggttgcgcc gtcgtcgtat
     3481 tccatgttgt tggaaaaaat catgaattgg gtgatgttga taaaacggcg gaatttggga
     3541 tttttcgcac gtttgcccat gcgctcccgc tcttcgccga tgccgccttt attgttgggc
     3601 tttttgactt cgataaagac caaaggcatg ccgtttacca gcagggcaat gtcggggcgg
     3661 aatgcttcgt cgccgttgat acaaggcaac tcagttacaa cgtggaaact gttgttgtca
     3721 aaattttgga aatcgatcag cttcttaccg ccggattgat tggtgaggcg ttcgtaaaat
     3781 ttttgcccca aatcttcgtt atccagctct aagcgtatgt cggcaagcag gcggcgtgca
     3841 tcatccggcg gcaaatcggg attgatgcgg cagaggctgt ctacaaagat ttcgggaaag
     3901 atattggttt gtctgtccca atttgcattt tttagcgaaa gataatcata gcccaagcgc
     3961 atcaggtgca aaacggcggg gattttgacg cgggaatttt cgttgtgggt ttgggacata
     4021 aacgtaacgt aatgggtcat caaaatttat tgaaacggat tataacacct gaaaaaagcc
     4081 gatacgcctt ttcggtgtac cggctttgcc atactgttct gcttcagacg acatcgcttc
     4141 attttgcctt taatgcctct tcgtccagcg atttcaacca tgccagcttt tcgccgattt
     4201 tgatttccag cccgcgcggg acgggttggt aaaagtccgg ttcgtccaag ccgtcgggca
     4261 tatagctttc gccggcggcg taggcgttcg gttcgtcgtg ggcgtagcgg tattcgcgtc
     4321 cgtagcccaa ttccttcatc agcttggtcg gggcgttgcg caggtggacg ggcacttcgt
     4381 cgctggcgtt ttctttgacg aagcggcgca tttggttgta tgccttgtag cccgcgttgg
     4441 atttggcggc ggcggcaagg tacagcacgg cttgcgccag cgcgagttcg ccttcgggcg
     4501 agcctaagcg ttcaaaggtg gcggcggcat cgttggcgat ttggaaggcg cgcgggtcgg
     4561 caagcccgat gtcttcccaa gcgatacgca cgatgcggcg ggcgagatag cgcgggtcgg
     4621 tgccgccgtc gagcatacgg caaaaccaat acagcgcggc gttcggatgc gaaccgcgca
     4681 cggatttgtg cagggcggag atttggttgt agaaactctc gccgcctttg tcgaaacggc
     4741 ggatttgcgc gcccaagctg tcggcgagaa attcggtggt caggattttc agacggcgcg
     4801 tgtcggcggc acgtaaaagt tgttccaaca aattcaataa tctgcgcgca tcaccgtcgg
     4861 cggtattgac gagcagctct tgcacatcgg cttcaatcgt gaaatcccgg tattcgggca
     4921 aagccaacac tttggcaatc agtttcttga ggtcgtctga agacaaggat tgcaaaacat
     4981 atacctgcgc gcggctcagc agcgcgggat tgacttcaaa cgacggattt tccgtcgttg
     5041 cgccgataaa ggtcagcaaa ccgctttcga catgcggcaa aaacgcgtcc tgctgcgcct
     5101 tgttgaagcg gtggacttca tcgacaaaca aaatcgtcgc gcgtccctgc tgcaaagcga
     5161 tttcagcctt atcgattgcc ccgcggatgt ccttcacgcc ggaaaacacg gcggaaacag
     5221 gcaaaaactg ggcattgaaa ctctgcgcca aaatccgcgc caacgttgtc ttgcccacgc
     5281 ccggcggccc ccacagcaac atagaatgcg gcttcccgcc ttccaccgcc acgcgcagcg
     5341 gcttgccttc gccgattaaa tgctgctgcc cgatgacatc atcaagcgta tgcgggcgca
     5401 gacgttcggc aagcggtgcg tcgggttctc ggacaaacaa atcggtcata acggctccgt
     5461 caacaggttt tcagacaata tgattatacg gcagggaaag gcggcgtgcc gcatacggat
     5521 accgccccac cgtttgtact aagccgatct taggcgtaca attgggaaat ttcaggaaat
     5581 ttatacgcta tgccatccat gcagctttgc aaccggaccc gcaaagacca ggtcccgttt
     5641 taaccatgcg gggaagttaa gattacagta aacaaaacta ttttgcctta ttggaagaaa
     5701 ggggaacagt tatgagaaat tggaacttat taccaccggg gaaggggcag atggagactt
     5761 actggtcaac ggttcttacg gcatccgttc ttttgcagac ctaaaattgg aatacaaacc
     5821 cgaattatcg gtgagaagca atcatgacat tattttcaac aatgattttc aatctgttga
     5881 cgtacaaccc tattccggaa atatccattt ggatgccaaa ggaaaaattc aatttaattt
     5941 gaatgttgcc gataaggtaa cagatccaac cacacatcaa gaaaagttag tgaacgataa
     6001 cgctttagtg cggtatgtca acaatatcac cccctccgat gaaaatgaca aaggcagcat
     6061 atccttccat tcaaaaacag gcaatttgtt caatatgaac gttaacgttc ataaaggcac
     6121 acaccatttc ggtattcaca acctccgcaa taccaatgtt aatctgactg ccgaagacgg
     6181 cgataatgtg gttgcgatta aagggaagct tgccgagcct atgccggcag gaaaagttga
     6241 gagtacaagt tttttaaggg gtattgaaac ggcttttaaa tccaataccg tattaacggg
     6301 gaataacaat aaaatatcca tcaccactga gggcgacggc ttgggattgg gcgtaaatgg
     6361 cctccagtcc aactccccct attccggaca cacgacgggt actttcatca ataatcaacc
     6421 aagcaatact acccaacctt cccttgacgg caccagcacc atcgaactca aagccgtcaa
     6481 ggggaataat gaagttgatt taaatgtaaa aaaccatgcc tccgtaaaag gcattatcac
     6541 gtcgcattct gcaaaagcaa cgcttgaagc cgaggaggat aatattgtcc gggttaaaaa
     6601 tccggacacc aagacggctt taatcaatgc ctggaaagaa aaatacccca ataattcgcc
     6661 agaaccatac agggtggggg ttcaatccac gattgacagc gatgtagttt tgagtgcggc
     6721 aaacaatatc gttgaagtag gaggcagccc gatgaaccaa gaagggatta ccgctcacgg
     6781 aaatgccacg attaccctca aggcgaaaga aaacaataaa attaccgtgg aaaacgccgc
     6841 atacagcagc gacggcattt cgactctgat taacagaacg gggcaagacc cggaacaagg
     6901 gatgatggaa ataaaatcat actggaagcc ggcggcgata atattgttac catgaaatcc
     6961 ggcgatgcgg atgcggatta tgtaaacaat tccaaagtat taacggagac accatattat
     7021 aaaagcaaac gaggttccaa cggcattttt gcctatggcg acaaatcgct ggtcaaactg
     7081 attggcgaga ataatatcgt taagagtgaa atcagtgaaa aatctaaggc attaaatggg
     7141 ggatttcgcc atatcggcat ttattcatgg caaaacgcga aagtcgaatt gtctgcgaag
     7201 agcgacaata tcgtacaagg cggaatttgg ggcttatact ccaacaactc ctcaatttcc
     7261 ctcaagggga aaaataatgt gatttcaaac ccgaaatata atgttttcgc ctacaaaaag
     7321 gcaaaggtgg atttgactgt cgaaaataaa aacacattat ctgatgcgga atttggcgta
     7381 tatgccttaa acacaagtat ggttaatttg tcttcaaaag ataataacga ggtaaaaagc
     7441 acccaagtgg gtctgtattc gcaagacggc ggttcaatca atgtagatag gaaggataat
     7501 attattgaag gcgacgcggt tgccttggtg ggaaaaggtg gaagtcaaaa cattcgggca
     7561 agccgtacaa acctgattag ttcaaaaagc ttaggaattc atgctgaaca agctgcaaaa
     7621 atagccataa ccggcgcaag caatacaatt catgcaagca atgccgctat tcgttcatta
     7681 gacaaaagcg aagttaagat tgacggtcaa attaccattg actccaacgt tgccaatctt
     7741 gcaaggcaag atggttcaat tcatttgaat tataaagacg atacccgtat cacaggggca
     7801 accgtatctg ataagggttt ggtagccatc aaacctttga ataacacgaa tattgttgcc
     7861 gacactattc actataaagg cgatgtcttg gcggtaaata agggtaaagt ggaattagat
     7921 ttcacgccga acatccgttt agtgggacgt ttggataatt ttagcggctt aaccgattcc
     7981 aaacataaaa atttattcga aaactatgtt gcaaatttag acagcaaaag tgcgggcgaa
     8041 attaacttta atttagccaa agacgcatta tggacgatga caggtcaaag ctggctggat
     8101 aaattggaag gacaaggcac tatcgatttt aataatgatg ctaaaacaag tggacgcgcc
     8161 ttacatatcg gcgaattggc gggtgccaat aaattcttga tgcatctgaa taaagacggc
     8221 attcacagcg atatgctcta tgtgaaaaaa ggcacttcga caccgcaaga agtcgtcgtc
     8281 aaaaatctgt ccgaagtgct cgacagtatg aattacggcg aacgtttgcg tttcgctaca
     8341 gtaacaaact caaaaaatga atttgtgaac ggtaaaaaat atattgacga tacgcacctt
     8401 atggaggatg ccctgactgt cgaatactcc gcacataacg gcgataaaaa caacaaggat
     8461 gactataata aatcctttaa cggctctgaa atgacggcgg aaaaagctgg agacgattat
     8521 gtcaataaaa cctataccga caacaggcaa aatgtctatt tggtcaaaca ggctaccggc
     8581 aatccgagca gaaatgtcaa aaatatcaat gatatgttcg attcaaccgc acattatgcg
     8641 ttcactttgg atacttatgc caaacgcgaa ggggagcggg ctttttcaac gttggataaa
     8701 aaagaaggcg attggataag gctgacgcat acccgtgtga ttcaatccaa tgcgtttagg
     8761 tttcataaca acgattttga aatcggatat gaccgattca gcctcaacga gcaggagaaa
     8821 aaacgcaaat ggggcataag tctcgactac ggccacggca ggacatcatt atggaatacg
     8881 tttggcaagg acaaaatcag gaaatatgaa ttggctctgt acaatactac ccaatacata
     8941 gataaagaag gagacgaaac agggtatatc gacaatgtat taaaaatagg aaaactgcgt
     9001 aaccgtgtga ttgcacgaaa tcatatgggg caattatggg gcaagggaaa atatagcaac
     9061 accctattct ctatcagcac cgaatacggc cgccgtaaat ttttggatga cgataaattg
     9121 tggcggatta caccgcaagt acagttgcaa tattcctatt tgagaggtac cggctatcgg
     9181 atcgataacg gcataaacgt caatttaagc cacgcaaaca gcctgatagg ccgcttgggt
     9241 ttggatgtcg tgagaaaatt tgacggaggc aaaaaacttt tctatatcaa aggcaatatc
     9301 tttcatgaat ttttgggcag tcgttccttt aaggcatttg agggcaaaag tcattatgct
     9361 caaaaatgaa atacgagggg gacttggtat tccgccggat tgggctacaa tgcgcggaca
     9421 ggcaaaaaaa aaaacgaatg tctttgccga tgcggaaaaa agagttttcc ggcgggaaaa
     9481 aaggatcgta caacatccgc ttatccgttt cccatcagtt tggctgaatg atatcggggc
     9541 cgcgccatta ttcggcaggc cccattttat tgccacacat tgcctgcccg attcccgttt
     9601 caacagcaaa cccttccaat attttgttca aacttggatc gcggcagatg ggggcgtgca
     9661 agccccgcaa ggtttttttg gcttttacgg aacagcacgc atttcgccaa acggcaaaat
     9721 tgcattaacg gaattgaaaa cttttggaat tgtgcaaaac ggcatttgcg tcagtttaac
     9781 ggcatttcca aagggcattt taagccgtat tcgagagaat gcggatggcg ttttcagtgt
     9841 tttcagcgtg ataaaattca aatttctatt ctaaaacaat cagcaaagca ggatttattt
     9901 cagttgtccg agacaacggg cggctgcacc gcctgcactc cccatacttt ttcaacgcac
     9961 tcgagcagga gtgagacgtg gggattatcc tcgtattctt ccgcataaat gaaattgagc
    10021 ggcatactgt ggcggcacga ttcgataata gccacgcccg cgccttcttt tgccgccgct
    10081 tcggctttgt ttccctgcac cattgccaca cctataccgc ctgcaaccaa atcgataagg
    10141 gtttgggggt agtcgcacaa tatctgtttt tttgggtgag agccggttgc tgcgccaaaa
    10201 ctggtgcagg tgcttcctac ttccggacac gcccgacatt tctatccata cgcattcttg
    10261 caggctctgc ggaagggagc gggtcagccg ggaatattgg ctttgcgggc aaatcagcgc
    10321 gtaggtcagg ttttgcagga atacgctgcg gatgccgcct tgggcggcgt tgccgagtat
    10381 aaagccgccg tgcagggttt tgtgttggat gcgcgagagg atttcgccgc tcattccgta
    10441 ttggatgtgc aggcgcgttt tggggggctg tttgaccgat attgtccgtc agcgcgacga
    10501 gttttgccga atcgatgggg tggataatgc ccaaactggt ctcttccgaa taatcgcctg
    10561 ccagcgtttt ggcaaaatac tccaacttgt gtttgtattg cagcagggat tccgcttcgg
    10621 gcaacagtat ttcgcccgcc cgcgtcaata ccatgccttt ccccgtgctc ctgaacagcg
    10681 gcgtgccgac atattcttca agggctttaa tttgggcgga aacggcgggc tgggaaagga
    10741 aaagtcgttt ggcggtttgg gtaaggttgc cctcgtgcgc gacggcgaca aatgatttta
    10801 attgtacggc atccatgtat ccctccttgt gcggatgttt tctatatttg tgcaatcgaa
    10861 atcttttagg cggattgttg ctgaaaatta actttttaat caagtggttt gtaaattgta
    10921 tcagttttcc ggatgatgat tattaaaaaa aaattggttt tattgcctgt ttgggcttta
    10981 aatggggtta cggcttccga acgcagcccg tatcaaaaag aaaagtcatg cgcccccttt
    11041 tacgaggcgc gatatataag gaggaaggtt atggaaaaac ataatgggac ttatcgggat
    11101 ttacaccgtc cggcttcgga atttgcgacg cgggacgaat atttggaaca tgaattgcag
    11161 attatgcaac caaaacgctg gcggcccaac ctgccctttc gcgattaccg cttcgagtgg
    11221 gaggatttga ttcctgcgat ggcgggaacg attggaaaag tggtgatggt gggggggcgg
    11281 cggcgtttgc cgcacctttg gggctgcctg acagctttgt actggaaaat gtgcgctatg
    11341 agcttttaat cgccgccgcg tctatcttat tggtatcggg cttttttctg cccggcgcca
    11401 acctgcccgg tacgcacggg ccgttgattc cgatgattcc catcgttgtg tcggcaggcg
    11461 ggcatccttt ggcgttcggc atttcgattg cggttttagg tctgctgatg gctttatttc
    11521 gcggcggcag tattatggcg aagctgacaa gcaacggcgt atgcggcgga ttattactct
    11581 atttgggctt tatcggcacg acggggcagg taaaaaaatt gttttcgtgg gcaggcggtt
    11641 ttaatatgcc ctacatcgct tttaccgtca ttattgtaac gattgtgatg tacgctttgt
    11701 tggagcattg gaaaaaacgc tggttggccg tgcctttggg atgcttgatt gccggtgtgg
    11761 cggcatttgc attgggtgcg ccgtttgagt ttcacaccgc ccccggcctg cctccaatga
    11821 gtcctgctta ttggtagggt gaaaacagcg gctggcatct ggggttgccg acggcagaaa
    11881 gttttttggt tgtctttcca tttgcggtat tggctgttgc aatgtggtcg cccgattttt
    11941 taggacatca agtgttccaa aaaatcagct atccggaaaa aaccgataag gtattgatga
    12001 atatagacga caccatgaca agttgttctg tccgtcaagc agtgggttct attttagggg
    12061 gtgcaaattt tacctcttct tggggaactt atatcgtgcc ggcatcgatt gccaaacgcc
    12121 ccattccggg cggtgcggtt ttaacggcgg ttttatgtat tatcgccggg ttgtggggct
    12181 atccgatgga cttggcgatt tggcagccgg tattgatcgt agccttgatc gtaggcgtat
    12241 gcttaccgct tttggaagcg ggcatggaaa tgacgcgcaa aggcaaaacc acccaatccg
    12301 ccgccatcgt ggtgttctct tccgtctggt caatccggtt ttcggctggg cgttgacgat
    12361 gctgttggat aatttgggct taatcggctg caaagaacgc agcgcgcaat taggttttgt
    12421 cggacgagta ttgatacccg cagtaggttt cttaatcttg tgtgtggcga tgggtgcggt
    12481 cgggatgctg cccggtatcc ctccgttttt ggagcagttc aaatctttgg gctaggctga
    12541 aatcgcaaat gccgtctgaa ccggtttcag acggcatttt tgcaaacagg caaaatgacg
    12601 gcggcgggat tttttatttt cccgattgaa gtataatgtt gccgggcttc aaccggatat
    12661 tcaaacggtt tgctccaaca ctcggaacgg cgcataaaac gccgcccttc gcgttatccc
    12721 gaacggggcg gctaatcaga tcctatcgcc ataaaaggcg gggtttcaac cgaaaaggaa
    12781 ttgagatgaa taaaaccttg tctattttgc cggcggcaat cttactcggc gggtgcgccg
    12841 ccggcggcaa cacattcggc agcttagacg gcggcacggg tatgggtggc agaatcgtca
    12901 aaatgacggt agaaagccaa tgccgtgcgg aattggacag gcgcagcgaa tggcgtttga
    12961 ccgcgctggc gatgagtgcc gaaaaacagg cggaatggga aaacaagatt tgcggctgcg
    13021 ctaccgaaga agcacctaac cagctgaccg gcaacgatgt gatgcagatg ctgaaccagt
    13081 ccacgcgcaa tcaggcactt gccgccctga ccgtcaaaac ggtttccgcc tgcttcaaac
    13141 gcctgtaccg ctaaccttct tcagacggca tgaggcagat gccgtctgaa tccgttttcc
    13201 tgcaatttcg acaaacgaga aaaatcatga gatacatcag cacgcgcggc gaaaccgcac
    13261 acaaaccgtt cagcgaagtt ttattgatgg ggcttgcacc cgacggcgga ctgatgctgc
    13321 cggaacatta tccgcaaatc gggcgcgaaa ccttggacaa atggcgcggt ttggcttatc
    13381 ccgaattggc gtttgaaatc atgtgcctgt tcgttaccga tattccggag gacgatttgc
    13441 gcgacattct gaaccgtact tacacggaag cggcgttcgg tactaaggaa atcacccccg
    13501 tccgcacgct ttcagacggc atcaaaatcc aagccttgtc caacggcccg acgctggcgt
    13561 tcaaagatat ggcgatgcag tttttgggca atgcgtttga atatgtttta aacaaagaag
    13621 gcaaaaaact caatatcttg ggcgcaacca gcggcgatac gggttcggct gcggaatatg
    13681 ccttgcgcgg caaaaaaggc gtgaacgtat ttatgttgtc gcccgacggt aaaatgagcg
    13741 cgttccaacg cgcgcagatg tacagcctgc aagacgggaa tatccacaat atcgccgtga
    13801 aggggatgtt tgacgactgt caggacattg tgaaggcagt gcagaacgat gccgcgttca
    13861 aggaaaaata ccatatcggt acggtcaatt cgatcaactg ggggcgcatc gtcgcgcaag
    13921 tggtttatta ctttgcaggc tatttcaatg ccacttcaag caatgacgaa accgtcagct
    13981 tttgcgtacc gagcggcaac ttcggcaacg tttgcgcggg acacatcgcc aaacaaatgg
    14041 gcctgcctgt ccgctgcctg attgtcgcga ccaatgaaaa cgatgtgctg gacgagtttt
    14101 tcaaaaccgg cgcataccgc ccgcgcaaca gcgcgcatac ttatgtaacc tccagcccgt
    14161 ctatggacat ttccaaagcg tccaacttcg agcgtttcgt gttcgacctg atggatcgcg
    14221 atcctcagga aatcaatacg ctgtgggcgg aagtcgcggc aggcaaaggc tttgacctgc
    14281 ggtttgcctt ggacaaagtc ggcggcaaat acggctttac ctccggcaaa tctacccacg
    14341 ccgaccgcct cgccaccatc agacaggttt acgagcaaga caaagaactc atcgacccgc
    14401 atactgccaa cggcgtaaaa gtcgcccgcg aagtgcgcga agcgggggaa acggtggttt
    14461 gtttggaaac cgcgttggcg gcgaaattcg atgcgaccat acgcgaagcc gtcggcgatg
    14521 tcgccattcc gcgccccgcc gcgctggaag gtttggaaaa cctgccgcag cgcgtgcaaa
    14581 ccgtgccgaa cagtgcggat gcggtaaaag gcatcatcga acaaaccctt gcctgatgtt
    14641 ccgtatgggc ggcattccat ccgaacttaa gattgaaaga aaatgacctt acctatgcag
    14701 gaaacccgtt tttctatact gctggacgaa ttggcggcaa aacaggaggc aaccatcgcc
    14761 ccctacctgc ttgccgacgg gaccaaggta tgggtacgca aagcaggcag gcacaatgcg
    14821 cgatggcgtt acgcgctgct cggtatggtt gcccgatatt tgaaactggg ggtgttgaag
    14881 ccggttccca gcctcggcgg cgagcctgcc attgcaaccg aatcaaaacg cctgtacgaa
    14941 ttgcgttcgg cagggatagc cgttcccgaa ttgctcgccc tccggaaaaa tgcccttatg
    15001 ttcggcaatt tggaaggcat cccgctcgat acgcaaatcc gccaagaagc cgaagccgga
    15061 aaggcggacg cttggcttgc cggtttggaa gccattgcac gcgtgcataa aaaacggcag
    15121 ttcctcagtc aggcgtttgc acgaaatatg atgtgggacg gaaaaaacat cagctttttg
    15181 gattttgaag acgacccttc cgaggtcctg accatagcgc aatgccaagc ccgcgattgg
    15241 ctctgctaca tccattcgac cgcgctgata ttgaaaaacg gcggactgct ggaagcggct
    15301 gcggaaaaat ggggcggcgt attgtcggat cagcctgccg aaatacaaaa gctgattgcc
    15361 ggcaccgtca aaccgattct cccgatacgc aggctggaac acccccgctg gggacgggac
    15421 gcgctcaggc tggcagcctc gatttcctta atttccctcg ccgatatgcc gccgtaagcc
    15481 accgcccgcc ccacgatgcc gtccgaagcc cttcagacgg catataacca acgcgcatca
    15541 ggcattgtcg caaccatccg tttcgtttag aattttgact ttatcccgaa tcgggcagac
    15601 atttccactc tgccgcacgt cccgaacaag cactatccat ttcttttact gacaggaaac
    15661 ccaaatggca gcattcaata cccaaaaagt attgtccgta caccactgga cagacgcata
    15721 ttttaccttt acctgcatcc gcgacgaatc gttgcgcttt gaaaacggac agttcgtcat
    15781 ggtcgggctg atggcggacg gcaagccgct gatgcgcgca tacagcgtcg cctccgccaa
    15841 ctgggaagaa cacctcgaat ttttcagcat taaagtccaa gacggcccgc tgaccagccg
    15901 cctgcaacac ctcaaagtcg gcgacgaagt gttaatcagc aaaaaaccga ccggaactct
    15961 agttgcctgc gatctgaatc cgggcaaaca cctttacctg ttgagtaccg gtaccggcat
    16021 cgcccctttc ttgagcatca ccaaagaccc cgaaatttac gaacagtttg aaaaaatcat
    16081 ccttgtacac ggcgtgcgct acaaaaagga tttggcatac tacgaccgct ttaccaaaga
    16141 attgcccgaa cacgaatacc tcggcgactt ggttaaagaa aaactgattt actacccgat
    16201 tgtttcccgc gaagaattcg aacaccgcgg ccgcctgacc gacctgatgg taagcggcaa
    16261 actgtttgaa gacatcggcc tgcccaaaat caacccccaa gacgaccgtg ccatgctgtg
    16321 cggcagccct gcgatgctga aagacacctg caaagttttg gacgatttcg gtctgacagt
    16381 ctccccgaaa accggcgtgc gcggcgacta cctgattgag cgcgcgtttg tggatcaata
    16441 agccgcttga aaatgccgtc tgaacggcat cagcgataaa aaaacccgaa tcctgccaat
    16501 caggattcgg ggtttttata gtgggtaaaa attagaaatg cacatttccg tcattccaac
    16561 acaggtggga atccggactt acctgtttca ttatcgtttg aaaataaaag agaaaccaaa
    16621 catatagatt cccgcttgcg tgggaatgac gacggtgttt tgccgtagcc aaagcaggaa
    16681 aacatcctta tt
//
LOCUS       DAXFZM010000052        16607 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.052, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000052 DAXFZM010000000
VERSION     DAXFZM010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16607)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16607)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16607
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.052"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(337..1053)
                     /gene="trmB"
                     /locus_tag="ACFJAG_001358"
     CDS             complement(337..1053)
                     /gene="trmB"
                     /locus_tag="ACFJAG_001358"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008176 - tRNA
                     (guanine(46)-N7)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HFC3980626.1"
                     /translation="MTDTAENQTPNDRQAGHPRSIRSFVLRQSHMTAAQQRAIDTLWD
                     SFGIDYQATPADLDARFGSSRPKILEIGFGMGMASAEIARRLPETDFLAIDVHGPGVG
                     NLLKLINENHLENIRVMRHDAVEVVENMLQDGSLDGIHIFFPDPWHKKRHHKRRLIQA
                     PFIAKLLPKLKTGGYIHLATDWEEYAQQMLEVLSSFDSLQNTAADYAPTPDYRPETKF
                     EARGKRLGHGVWDLVFKRIG"
     gene            complement(1175..2580)
                     /locus_tag="ACFJAG_001359"
                     /pseudo
     CDS             complement(1175..2580)
                     /locus_tag="ACFJAG_001359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674669.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
     gene            complement(2697..4583)
                     /gene="uvrC"
                     /locus_tag="ACFJAG_001360"
     CDS             complement(2697..4583)
                     /gene="uvrC"
                     /locus_tag="ACFJAG_001360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HFC3980627.1"
                     /translation="MPSEAVFQMIDMNTENRSPEQFDIPLFLKNLPKLPGVYRFFDEG
                     GNVLYVGKAVNLKRRVSGYFQKNDHSPRIALMVKQVRHIETTITRSEAEALILENNFI
                     KALSPKYNILFRDDKSYPYLMLSGHQYPQMAYYRGTLKNPNQYFGPYPNSNAVRDSIQ
                     VLQKVFMLRTCEDSVFEHRDRPCLLYQIKRCTAPCVGHISEEDYCDSVRQAATFLNGK
                     TDELTRTLQHKMQTAAANLQFEEAARYRDQIQALGIIQSNQFIDSKNPNNPNDIDLLA
                     LAVSDGLVCVHWVSIRGGRHVGDKSFFPDTKNDPEPNGQDYAEAFVAQHYLGKSKPDI
                     IISNFPVPDALKEALEGEHGKQMQFVTKTIGERKVWLKMAEQNAQMAITQRHLQQSNQ
                     QHRIDELAKILGMNSDGINRLECFDISHTQGEATIASCVVYDEQNIQPSQYRRYNITT
                     AKPGDDYAAMREVLTRRYGKIQEAEANGESVKWPDVVLIDGGKGQIGVAVSVWEELGL
                     HIPLVGIAKGPERKAGMEELILPFTGELFRLPPNSPALHLLQTVRDESHRFAITGHRK
                     KRDKARVTSSLGDIPGVGSKRRQALLTRFGGLRGVIAASREDLEKVEGISKALAETIY
                     NHLH"
     gene            complement(4638..6815)
                     /locus_tag="ACFJAG_001361"
     CDS             complement(4638..6815)
                     /locus_tag="ACFJAG_001361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HFC3980628.1"
                     /translation="MQQKIRFQIEGMTCQACASRIEKVLNKKDFVESAGVNFASEEAQ
                     VTFDGSKTSVADIAKIIEKTGYGAKEKTEDTLPQPEAEHHIGWRLWLLLTINIPFLIG
                     MVGMMLKGLNWTRHDWMIPPVWQFVLASIVQLWLAIPFYKSAWASIKGGLANMDVLVT
                     IGTVSIYLYSVYMLFFSSHAAHGMAHVYFEAGVMVIGFVSLGKFLEHRTKKSSLNSLG
                     LLLKLTPTQVNVQRNGEWKQLPIDQVQIGDLIRTNHGERIAADGIIESGSGWADESHL
                     TGESNPEEKKAGGKVLAGALMTEGSVVYRAAQLGSQTLLGDMMNALSEAQGSKAPIAR
                     VADKAAAVFVPTVVGIALLTFIVTWLIKGDWTVALMHAVAVLVIACPCALGLATPAAI
                     MVGMGKAVKHGIWFKDAAAMEEAAHVDAVVLDKTGTLTEGRPQVAAVYYVPDSGFDED
                     ALYRIAAAVEQNAAHPLARAIVSAAQARGLEIPAAQNAQTVVGTGITAEVEGVGLVKS
                     GKAEFAELTLPKFSDGVWEIASAVTVSVNGKPIGAFALSDALKADTAEAIGRLKKHNI
                     DVYIMSGDNQSTVEYVAKQLGIAHAFGNMSPCDKAAEVQKLKAAGKTVAMVGDGINDA
                     PALAAANVSFAMKGGADVAEHTASATLMQHSVNQLADALLISQATLENIKQNLFFAFF
                     YNILGIPLAALGFLNPVIAGAAMAASSVSVLGNALRLKWVKID"
     gene            6954..7904
                     /gene="trxB"
                     /locus_tag="ACFJAG_001362"
     CDS             6954..7904
                     /gene="trxB"
                     /locus_tag="ACFJAG_001362"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004791 - thioredoxin-disulfide reductase
                     (NADPH) activity [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA];
                     GO_process: GO:0019430 - removal of superoxide radicals
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HFC3980629.1"
                     /translation="MSQHRKLIILGSGPAGYTAAVYAARANLNPVIITGIAQGGQLMT
                     TTEVDNWPADADGVQGPELMARFLAHAERFGTEIIFDQINAVDLQKRPFALKGDMGEY
                     TCDALIVATGASAKYLGLPSEEAFAGKGVSACATCDGFFYKNQDVAVVGGGNTAVEEA
                     LYLANIAKTVTLIHRRSEFRAEKIMIDKLMKRVEEGKIILKLESNLQEVLGDDRGVNG
                     ALLKNNDGSDQQIAVSGIFIAIGHKPNTDIFKGQLEMDEAGYLKTKGGTADNVGATNI
                     EGVWAAGDVKDHTYRQAITSAASGCQAALDAERWLGSQNI"
     gene            8060..8428
                     /gene="rpsF"
                     /locus_tag="ACFJAG_001363"
     CDS             8060..8428
                     /gene="rpsF"
                     /locus_tag="ACFJAG_001363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HFC3980630.1"
                     /translation="MRHYEIVFIVHPDQSEQVPAMVERYKTMITEANGKIHRLEDWGR
                     RQLAYPINKIHKAHYVLMNIETTPEVVGELETAFRFNDAVLRHLTIKTKHAVTEASPM
                     LGGEKAKNLLVGAAEEAAAQ"
     gene            8429..8731
                     /gene="priB"
                     /locus_tag="ACFJAG_001364"
     CDS             8429..8731
                     /gene="priB"
                     /locus_tag="ACFJAG_001364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030894 - replisome [Evidence IEA];
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal replication protein N"
                     /protein_id="HFC3980631.1"
                     /translation="MGFTNLVSLAALIEKAFPIRYTPAGIPVLDIILKHESWQEENGQ
                     QCLVQLEIPARILGRQAEEWQYRQGVYVHVEGFLAQKSRRSLMPMLRIQNIKEYKG"
     gene            8738..8968
                     /gene="rpsR"
                     /locus_tag="ACFJAG_001365"
     CDS             8738..8968
                     /gene="rpsR"
                     /locus_tag="ACFJAG_001365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009120066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HFC3980632.1"
                     /translation="MARQSFKRRKFCRFTAEKIQEVDYKQVDLLKDFISENGKIIPAR
                     ITGTKAFYQRQLAVAVKRARFLALLPYTDQHK"
     gene            8985..9437
                     /gene="rplI"
                     /locus_tag="ACFJAG_001366"
     CDS             8985..9437
                     /gene="rplI"
                     /locus_tag="ACFJAG_001366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HFC3980633.1"
                     /translation="MQIILLEKIGGLGNLGDIVTVKNGYARNFLIPAGKAKRATEANM
                     KEFEARRAELEAKQAEILADARARQEKLDGQTVTVAQKAGVDGRLFGSVTNADIAAAI
                     VAAGIEAVKANVRLPNGPLKAVGEYEVEVALHTDAVAKITVAVIAAAE"
     gene            complement(10060..10866)
                     /locus_tag="ACFJAG_001367"
     CDS             complement(10060..10866)
                     /locus_tag="ACFJAG_001367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HFC3980634.1"
                     /translation="MWHWDIILILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQG
                     LAQHPYAQHLAVGTSFAVMVFTAFSSMLGQHKKQTVDWKTIFAMMPGMIFGVFAGALS
                     AKYIPAFGLQIFFILFLTAVAFKTLHTGRQTASRPLPGLPGLTAVSTLFGAMSSWVGI
                     GGGSLSVPFLIHCGFPAHKAIGTSSGLAWPIALSGAISYLVNGLNIAGLPEGSLGFLY
                     LPAVAVLSAATIAFAPLGVKTAHKLSSAKLKESFGIMLLLIAGKMLYNLL"
     gene            complement(10867..11613)
                     /gene="pssA"
                     /locus_tag="ACFJAG_001368"
     CDS             complement(10867..11613)
                     /gene="pssA"
                     /locus_tag="ACFJAG_001368"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003882 - CDP-diacylglycerol-serine
                     O-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HFC3980635.1"
                     /translation="METPTNTPQRSLRQNSIYLLPNSFTIAALFSAFYAITQSMHGRY
                     ETAAIAVFISMLLDGMDGRVARLTNSQSAFGEQLDSLADMVSFGVAPALIAYKWQLWQ
                     FGKIGYSVAFIYCACAALRLALFNTLIGKVDKRWFIGVPSPTAAALIVGLIWVNHSVE
                     KFPAVHWWALGITLFAGLSMIVQIPFWSFKEINIRRQVPFVGMLLAVLLLLLVTWEPS
                     LVLFLFFLGYSLSGYIMAARRFWKKYRKAD"
     gene            12197..12679
                     /locus_tag="ACFJAG_001369"
     CDS             12197..12679
                     /locus_tag="ACFJAG_001369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4189 domain-containing protein"
                     /protein_id="HFC3980636.1"
                     /translation="MMKKILAVSALCLMTAAARAADTYGYLAVWQNPQDANDVLQVKT
                     TKEDSAKSEAFAELEAFCKGQDTLAGIAEDEPTGCRSVVSLNNTCVALAYPKALGAMR
                     VENAVVITSPRFTSVHQVALNQCIKKYGAQGQCGLETVYCTSSSYYGGAVRSLIQHLK
                     "
     gene            complement(12726..13937)
                     /locus_tag="ACFJAG_001370"
     CDS             complement(12726..13937)
                     /locus_tag="ACFJAG_001370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015205 - nucleobase transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-xanthine permease family protein"
                     /protein_id="HFC3980637.1"
                     /translation="MNQLKLAVSGAQILFVAFGAMVLVPLLTGLNPALALLGAGLGTL
                     LFQITTKRKVPIFLGSSFAFIAPIIYSVGEWGLPSTMFGLFAAGFMYFVFAALIRWRG
                     LAAVHKLLPPVVTGPVIMVIGLSVAVAASSMAMGQADGKQVIDYTDSLILSGFTFAVT
                     AIVSVFGSRMMKLIPILIGVASGYVLALLMGLVDTTSIAHAPWFAVPHFETPQVNWQA
                     ALFMLPVAVAPAIEHIGGIMAIGNVTGKDYTKDPGLDKTLAGDGLGVCVAGLIGGPPV
                     TTYGEVTGAVMITKNSNPVIMTWAAVFAVCMAFFGKFNAFLASIPMPVMGGIMLLLFG
                     TIASLGIKTLIDAKVDLMLPKNLVIVSSVLTTGIGGMTLKLGSFSFVGVGLCAVLAIV
                     LNSLLPDPKES"
     gene            14159..16597
                     /locus_tag="ACFJAG_001371"
     CDS             14159..16597
                     /locus_tag="ACFJAG_001371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HFC3980638.1"
                     /translation="MTEKSHKKTAKGRAGSPSPTSARNKKADNGARGNKVSERLKAVK
                     ELQKTEAKKARPEHVVNLIADALWLMGLAATLYLAISLISFDMGDPSWSHSSPVVEDA
                     ANWGGLFGAYVADVGYYLFGWSFWWWIAAACVVLYKNFRLHAKQTENEAYNHKIAAAA
                     LFVLTVFSPVLEYFVLGGKYADSLPVGAGGMVGIRVGAVFAWLLGKSGSLLIILVVLL
                     LSLSLLVQISWLEFLNGAGRAVQNRLSALSGKVMALRKRRPNTKTDGVDTQNTRRMVK
                     EAKNITAKPVALPEGSSSNRKSVAVSVAPPPKIQPSLFEDNEVQQNGEYHKPTLNLLR
                     IPDSEPVSINPAELERTAELIESKLAEFGIGVQVVSATSGPVITRYEIEPAQGVKGSQ
                     IVALSKDLARSMSLQSVRIVETIAGKNTMGIELPNDKRQDVMLSEILSSPVFAEAKSK
                     LTVALGKDIAGTPVVGDLAKMPHLLVAGMTGSGKSVGVNGMIMSMLFKATPEEVRFIM
                     IDPKMLELSIYDGIPHLLCPVVTDMREAGQALNWCVAEMEKRYRLLSHAGVRNLEGFN
                     QKVEQAKAAGKPLLNPFSLNLDEPEPLEKLPMIVVVIDELADLMMTERKAVEQQIARL
                     AQKARAAGIHMIVATQRPSVDVVTGLIKANIPTRMAFTVQSKIDSRTILDQMGADELL
                     KYGDSLFLQPGSAEPTRLQGTFVSDGEVHQVVNYVKSQAPADYIEGLLSGEAALETAN
                     IVNPNADSDELFDQAVAYVLESKKTSISSLQRQLRIGYNRAANLMEALENAGIVSPSD
                     FNGSRKILAHKDHL"
BASE COUNT         3793 a         4155 c         4697 g         3962 t
ORIGIN      
        1 tttaaatatg tcattttatt ttccagtaaa tagaagttta gttgttttgt taactatgcc
       61 tgaatgtaca cctaagtctt cttttggtaa cgatgaataa ttagcaagcc gtagcctgca
      121 tctccgccaa ccgtgtgcca ctatctgcgg gcggaataaa ctttaaaacc gatgtgcagg
      181 ttaaaaccta caaggatgcg tgcggtatac acgcgttttt gccgttcaaa ccattgtttc
      241 aaaacttgta ttgaaacatc gcccgctgct ttatcttgaa agaatgccgt ctgtaagcaa
      301 acatgcttca gacggcattt tttatccggc ggtctgttat ccgatccgtt tgaataccaa
      361 gtcccaaacg ccgtgtccga ggcgtttgcc gcgcgcttcg aatttggttt cggggcggta
      421 gtccggagtg ggggcgtagt ctgccgccgt attttgcagg ctgtcgaagc tgctgaggac
      481 ttcaagcatc tgctgtgcat attcttccca gtctgtcgcc aggtggatat agccgccggt
      541 tttgagtttg ggcagtagtt tggcgatgaa gggggcttgt atcagacggc gtttgtggtg
      601 gcgttttttg tgccacgggt cggggaagaa tatgtggatg ccgtcgagcg agccgtcttg
      661 cagcatattt tcgacaactt ctacggcatc gtgccgcatc acgcggatgt tttccaaatg
      721 gttttcgttg atgagtttga gcaggttgcc tacgccgggg ccgtgtacgt cgatggcgag
      781 aaagtcggtt tcgggcaggc ggcgggcgat ttctgcgctt gccatcccca taccgaagcc
      841 tatttcgagg attttaggtc ggctgcttcc gaaacgggca tcaagatcgg ccggtgttgc
      901 ttggtagtcg atgccgaagc tgtcccataa ggtatcgatg gcgcgttgct gtgcggcggt
      961 catgtggctt tggcggagga cgaaactgcg gatgctgcgg gggtgtccgg cttgacggtc
     1021 gtttggtgtt tggttttcgg cggtgtctgt cataatgctt ctgtgcgctt gtgcaatcag
     1081 gatgccgtct gaatgtgaaa ggcctgttcg gacggcggga agggaaaggg gcgattatac
     1141 ctgtttcgtt tcggcagggt aggtgtaact ctgttcagac ggcattttgc cactgttgca
     1201 gcagttcttg caggacgctt ttttgcccgt atccgttgtt tatggcttct tgcaggtagc
     1261 ggcaggcttt ttctttgtcc ggcctggcac cgtgtccgct gtaatggatg caggcgaggt
     1321 tgtagaacgc catactgtct ttttgcgcgg cggcttgttc aaaccatttg cgggctttgc
     1381 agtagtcggc ggctatgccc tgtccgaagt agtacatact gcccagattg gtttgggctt
     1441 tgctgtgtcc gagttctgct gcttctgtgt agagtttgag cgcggctgcg tattcgggcg
     1501 cgcattgtaa tccgtaatgc agggcttggg ctttttgata aagctgttct gccctttgcc
     1561 gcctaatggc ggaatctttg atgccgtcat attgctcggg atggtttaac gcgctgtcgg
     1621 atatgagttt ctgataggcg gtaaggctgc cggcttcggc tgcctgccgg taataatgcc
     1681 gggctttttc cgtatcgagg gctatgccca aaccgtagcg gcagatgtcg cccggtatcc
     1741 gcaaaccttc gggatggcgt tcggcggcgg ctgcttcggc atgatgcagg gcaagtttgt
     1801 ggtttctttc cagatacttg ccttgcaggt agatgtcggc cagtgcggca tgggcatcgg
     1861 ggtcattttc ctgtgccgcc tgttggaacc ggtaaacggc ttcatcggga gccgtaggta
     1921 ggatgagttc ggcaagcggg gtgtaggcgg gaatgtatcc ttgttgcgcg gcggcgcgca
     1981 aatgattgac ggcctgtgcc gtgtcggctt tcgtcccttg tccgaaacgg tattgcagcc
     2041 cgagttgcca atgtgcttcc ggcaagcctt gtgccgccgc tttgcggtag agcaggtgcg
     2101 ccgtttcaaa atccggcggc gtgccgtgcc ggcagtattg ggcgagcagg tattgcccgc
     2161 ggggattgtt gttttttgcg cttgttttgc ccattccagg gcttcttcaa aatgtcggga
     2221 cgcgtacaga aggtacatca ggcggacttg cgcttcgggc aggcctgctt ctgccagagg
     2281 cctgtaaagc ggtatcaggg tttccggggg cgcgccttcc aattcttgga tatatgccaa
     2341 attgtaacgc gcatagggat gcccctgttc ggcggcgatg cggagcattt ccataccttg
     2401 ttcgcggtct tggtgcgggc tgtccgcgtt catcaggtgt tttgccaact tgaatgcggc
     2461 ggcgggatga tctgccgagg ccgcttctgt cagcagtcgg cggacttcgg taaagttata
     2521 atattgtttt tgagacaggc gttccaaggc ctgccgatag ggtaagtcgg gattgttcat
     2581 atcagatcgt tttccgtttt gtcgaatcat cgttattcgt catgaagtta ggtttatatc
     2641 ggtatgccgg cctgctgtat catattttta caggcggttt ttgctttggc ggcatactaa
     2701 tgcagatgat tataaatggt ttccgccaat gccttgctga tgccttccac tttttccaag
     2761 tcctcgcggc tggcggcaat cacgccgcgc agtccgccga agcgggtaag cagggcttgg
     2821 cggcgtttgc tgcctacacc gggaatgtcg ccgagagacg aggtaacgcg tgctttgtcg
     2881 cgttttttac ggtggcctgt gatggcaaag cggtgtgatt catcgcgtac ggtttgcaat
     2941 aaatgcaagg ccgggctatt aggaggcagg cggaagagtt cgccggtaaa aggcagtatg
     3001 agttcttcca tgccggcttt gcgttcgggg cctttggcaa taccgactaa agggatgtgc
     3061 agcccgagtt cttcccatac ggatacggct acgccgattt gccctttacc gccgtcaatc
     3121 aacacgacat ccggccattt gacgctttcg ccgttggctt cggcttcctg tattttgcca
     3181 taacggcgcg tcaacacttc gcgcatggcg gcgtagtcgt cgccgggttt ggcggtggtg
     3241 atgttgtagc ggcggtattg cgagggttgg atgttttgtt cgtcgtacac gacgcaggag
     3301 gcgatggtgg cttcgccttg cgtgtggctg atatcgaaac attcaaggcg gttgattccg
     3361 tctgaattca tgccgaggat tttggcaagt tcgtcgatgc ggtgttgttg gttgctttgt
     3421 tgcaggtggc gttgggtaat cgccatttgt gcgttttgtt ccgccatttt caaccaaact
     3481 ttgcgttcgc ctatggtttt ggtaacgaac tgcatctgct tgccgtgttc tccttccaaa
     3541 gcctctttca acgcatcggg aacgggaaag ttgctgatga tgatgtcggg tttgcttttg
     3601 cccagatagt gttgggcgac gaaggcttcg gcgtaatctt gaccgtttgg ttcggggtcg
     3661 tttttggtgt cgggaaagaa acttttgtcg ccgacgtgcc gtccgccgcg gatgctgacc
     3721 cagtgtacgc agacaaggcc gtctgaaacg gcgagcgcga gcaggtcgat atcgttgggg
     3781 ttgttcgggt ttttgctgtc gatgaactgg ttgctctgta taatgccgag tgcttggatt
     3841 tggtcgcgat aacgggcggc ttcttcaaat tgcagattcg cggcggcggt ctgcattttg
     3901 tgttgcaggg tgcgggtcag ttcgtcggtt ttgccgttga ggaaagtggc ggcttgacgc
     3961 acgctgtcgc agtagtcttc ttcgctgatg tgtccgacgc agggcgcggt gcagcgtttg
     4021 atttggtaca gtaggcaagg gcggtcgcgg tgttcgaaca cgctgtcttc gcaggtacgc
     4081 agcatgaaga ctttttgcaa cacttgaatg ctgtcgcgca cggcgttgct gttcggatac
     4141 gggccgaagt attggttggg atttttcagc gtgccgcggt aatacgccat ttgcggatat
     4201 tgatggccgc tgagcatcaa ataaggatag cttttgtcgt cgcgaaaaag gatattgtat
     4261 ttcggcgaca aggctttgat gaagttgttt tcgagaatca gggcttcggc ttcggaacgc
     4321 gtgatggtgg tttcgatgtg gcgaacctgt ttcaccatca acgcgatgcg cggcgaatgg
     4381 tcgttttttt ggaaatagcc ggacacgcgc cgcttgaggt tgaccgcttt gccgacgtat
     4441 aagacgttgc cgccttcgtc aaaaaaacgg tacacgcccg gcagcttggg caggtttttg
     4501 aggaagagcg ggatgtcgaa ttgttccgga gaacggtttt ctgtattcat atcaatcatt
     4561 tgaaaaacgg cttcagacgg catatcggca gcggcagcct tatccgttcg gaaaagctgt
     4621 cgggcggtta tatgcggtca atcgattttt acccatttca ggcgcagggc attgcccaat
     4681 accgaaaccg agcttgccgc cattgccgcg cctgctatga cgggatttaa aaagccgagc
     4741 gcggcgagcg gaatgcccaa tatattgtag aagaaggcga aaaataggtt ttgcttgatg
     4801 ttttccaacg ttgcctgcga tatcagcagg gcatcggcga gctgattgac cgaatgctgc
     4861 atcagcgtgg cggaggcggt gtgttcggca acgtccgcac cgcctttcat ggcgaagctg
     4921 acgttggcgg cggcaagcgc gggcgcgtcg ttgatgccgt cgccgaccat cgccacggtt
     4981 ttgccggcgg ctttgagttt ctgcacttcg gcggctttgt cgcacggact catattaccg
     5041 aaggcgtgtg cgatgcccag ttgtttggcg acgtattcga ccgtactttg gttatcgccg
     5101 ctcataatat agacatcgat attgtgtttt ttcagacggc ctatggcttc ggcggtatcg
     5161 gctttcaacg cgtcggagag tgcgaatgcg ccgatcggtt tgccgtttac agatacggta
     5221 accgcactgg cgatttccca aacgccgtct gaaaacttcg gcaaggtcag ttcggcaaat
     5281 tcggctttgc ctgatttcac caaacccacg ccttccactt cggcggtaat gcctgttccg
     5341 acaacggttt gcgcattttg tgcagcggga atctccaaac cgcgcgcttg tgcggcggag
     5401 acgatggcgc gggcgagcgg gtgggcggcg ttttgctcga cggcggcggc gatgcggtac
     5461 aaagcgtctt cgtcaaagcc gctgtcggga acgtaataaa cggcggcaac ctgcggcctg
     5521 ccttcggtca gcgtaccggt tttgtccaat acgacggcat cgacgtgggc tgcttcctcc
     5581 attgccgccg cgtctttaaa ccaaatgccg tgtttcaccg ctttgcccat gccgaccata
     5641 atcgcggcag gggtcgccag accgagcgcg cacgggcagg caatcaccaa aacggcaacg
     5701 gcgtgcatca gtgcgaccgt ccaatcgccc ttaatcagcc aagtaacgat aaaagtcaga
     5761 agcgcgatgc ccacgacagt tggcacaaat accgccgccg ctttatcggc cacgcgcgca
     5821 atcggtgctt tactgccttg tgcttcagag agcgcgttca tcatgtcgcc gagcagggtt
     5881 tggctgccga gctgcgcggc gcggtacacc acgctgcctt cggtcatcag cgcgcccgcc
     5941 aacactttgc cgcccgcctt tttctcttcg ggattggatt cgccggtaag gtggctttcg
     6001 tccgcccaac cgctgccgct ttcgataatg ccgtcggcag cgatgcgttc gccgtggttg
     6061 gtgcggataa ggtcgccgat ttgcacttgg tcgatgggca gttgtttcca ttcgccgttg
     6121 cgttgcacgt tgacttgggt cggcgtgagt tttagcagta agcccaagct gttcaggctg
     6181 gattttttgg tgcggtgttc caaaaattta cccagcgaca caaaaccgat caccatcacg
     6241 cccgcttcaa aatacacatg cgccataccg tgcgccgcat gcgaactgaa aaacagcata
     6301 taaacggaat acaggtaaat cgacaccgtg ccgatggtaa cgagtacgtc catattcgcc
     6361 agcccgcctt taatgcttgc ccacgcgctt ttgtaaaacg ggattgccag ccaaagttgc
     6421 actatgcttg ccagtacaaa ctgccataca ggcggaatca tccaatcgtg ccgtgtccaa
     6481 ttcagccctt ttagcatcat ccctaccata ccgataagga acgggatatt gatggtcagc
     6541 aaaagccaca accgccagcc gatatggtgt tctgcttcag gttgcggcaa tgtatcttcc
     6601 gttttttcct tcgcgccgta accggttttc tcaatgattt tggcaatgtc ggcaaccgag
     6661 gttttgctgc cgtcaaacgt aacctgcgct tcctcactgg caaagttcac tcccgccgat
     6721 tcgacaaaat cttttttgtt caacactttt tcaatgcgcg aagcacatgc ctgacaggtc
     6781 atcccctcga tttggaaacg gattttttgt tgcataagtt tgattcccgt tttgatgttc
     6841 agacggcagt caaggctgcg ggatgccgtc tgaacgccgg tatggtcaaa atttctcaaa
     6901 cgcgccgata attcgggtag aatccgaaaa cttgacacag caaaggaaaa acaatgtccc
     6961 aacaccgcaa actgattatt ttgggttccg gccccgccgg atacaccgcc gccgtctatg
     7021 ccgcacgtgc caatttaaac cccgtcatta ttacaggtat cgcgcaaggc gggcaactga
     7081 tgacaacgac tgaagtggac aactggcctg ccgatgccga cggcgtgcaa gggccggaat
     7141 tgatggcgcg gtttctcgcc cacgccgaac gtttcggaac ggaaatcatt tttgaccaaa
     7201 tcaacgccgt cgatctgcaa aaacgcccgt tcgcactcaa aggcgatatg ggcgagtaca
     7261 cttgcgatgc cctgattgtc gccaccggcg cgtccgccaa ataccttggt ttgccgagtg
     7321 aggaagcgtt tgcagggaaa ggcgtttccg cctgcgccac ctgcgacggt ttcttctaca
     7381 aaaaccaaga tgttgccgta gtcggcggcg gcaatacggc agttgaggag gcactctacc
     7441 ttgccaatat cgccaaaacc gttacgctga ttcaccgccg cagcgagttc cgtgctgaaa
     7501 aaatcatgat tgacaaactg atgaaacgcg tggaagaggg caaaatcatc ctcaagctgg
     7561 aaagcaacct gcaagaagta ctgggcgacg atcggggcgt aaatggcgca ttattaaaaa
     7621 acaacgacgg ttctgatcaa caaattgccg tcagcggcat ctttatcgcc atcgggcaca
     7681 agccgaatac cgatattttc aaagggcagt tggaaatgga cgaagccggc tacctgaaaa
     7741 caaaaggcgg cacggcggac aatgtcggtg caaccaatat cgaaggcgta tgggcggcgg
     7801 gcgacgtaaa agaccatacc taccgtcagg caattaccag cgcggcctcc ggctgtcagg
     7861 cggctttgga cgcggaacgt tggctgggca gccaaaacat ttgaatgccg tctgaaaccg
     7921 aaattttcgg cggaatgcaa gtttttcgta ccaaatcctt gattccgtcg gcaaacccca
     7981 atataatgcc tgctatttga accttgcctt ctgctttcgc atggcagaag gctgttttta
     8041 ccatccataa ggagataaca tgcgtcatta cgagatcgtg tttatcgttc atcctgatca
     8101 aagcgagcaa gtgcccgcta tggttgaacg ttacaaaacc atgattaccg aggcaaacgg
     8161 taagattcac cgtttggaag attggggccg ccgccaactg gcttacccga ttaacaaaat
     8221 ccataaagca cattatgttt tgatgaacat cgaaaccact cccgaagttg ttggggagtt
     8281 ggaaaccgcg ttccgtttca atgatgcggt attgcgtcat ctgaccatca aaaccaaaca
     8341 cgccgttacc gaagcctccc ctatgctggg cggcgaaaag gctaagaacc tgttggtcgg
     8401 cgcggctgaa gaagcggctg cccaataatt gggattcact aatcttgttt cgcttgccgc
     8461 gctgattgaa aaggctttcc ctattcgata tacgcctgcc ggaatccctg ttttagatat
     8521 tattttaaag cacgaatcgt ggcaggagga aaatgggcag caatgccttg tccaattgga
     8581 aatccccgcg cggattttgg gtaggcaggc ggaagagtgg cagtatcggc aaggtgtata
     8641 tgttcacgtc gaaggttttt tagctcaaaa aagcagacgt tccctgatgc cgatgctcag
     8701 gatacaaaat attaaagaat ataaaggtta aacgacaatg gctcgtcaat cattcaaacg
     8761 tagaaaattc tgccgtttca cggctgaaaa aatccaagaa gtcgattaca aacaagttga
     8821 tttgctgaaa gactttatct ctgaaaacgg taaaatcatt cctgcccgca tcacaggaac
     8881 gaaggcattc taccaacgcc aattggctgt tgccgtaaaa cgcgcgcgct tcttggcact
     8941 cctgccttat accgaccaac acaaataatt ttggagttta aatcatgcaa attattctgt
     9001 tagaaaaaat cggcggtttg ggtaatttgg gcgacatcgt taccgtaaaa aacggttatg
     9061 cccgcaactt cttgattcct gctggtaagg caaaacgtgc tactgaagca aacatgaaag
     9121 agtttgaagc acgccgcgcc gaattggaag ccaaacaggc cgaaattttg gcagatgccc
     9181 gagcccgtca ggaaaaactg gacggtcaaa ccgttaccgt tgcacagaaa gccggtgtgg
     9241 acggccgcct gttcggttcc gttaccaatg ccgacattgc tgctgcaatc gttgctgccg
     9301 gcatcgaagc cgtgaaagca aatgtacgtc tgccgaacgg tcctctgaaa gccgttggag
     9361 agtacgaagt ggaagtggct ttacacactg atgccgttgc taaaattact gttgccgtca
     9421 ttgccgcagc cgagtaattg aaattatcag atgccgtctg aaaccctgcc gattatcaga
     9481 atgtggtttc agacggcatt tgttttgttt tccgtatatt ctgcaaaaat cgggacggtt
     9541 gttttttatt tgcctgaggt ctttgcagaa atggtttgtt aacgaaattt gatgcataaa
     9601 atgcgccaaa aaatattggc tgtgttttaa tatagtgttg acaagcgtac ctggtttcaa
     9661 tatattcaat aggataggtc tcttcccaac cgaaaaaata attgtctttt ctcttgtaaa
     9721 tagttgaaat agattgtcaa aatacatcct aaaaaattta ataacttata tgattgcaaa
     9781 ggttgcggct tgtatgccgg tcattatggc ggaaataccg tttgggaggc agtcgcatcg
     9841 catggagtcg gcacggcagg cgatgcgccg atgccttcgg gcgtgaaggc agggaaatcg
     9901 gcagtttgga aaaaggcaat ggaatccgca ggtaggtgtc gattgggtgg tgaaaggcaa
     9961 taagtcgggc gcacgctcag actgcctatc cccttgtcgg aacgggaggt agggcagctt
    10021 tgtcctgact aattgcttgt gcaaacggta agaaggtttt taaagcaggt tgtacagcat
    10081 ttttccggca atcaaaagca acataatgcc gaaggattct ttgagtttgg cagaagaaag
    10141 tttgtgggcg gttttgacac cgagcggggc aaaggcaata gttgccgcgc tgaggacggc
    10201 gacggcgggc aggtaaagga agcccagcga cccttcgggc aatcctgcaa tattcagacc
    10261 gttgaccaga tacgatattg cgccggagag tgcaatcggc caggcaaggc cggatgatgt
    10321 gccgatggct ttatgggcgg ggaagccgca gtggattaag aaggggacgg aaagtgaacc
    10381 gccgcctatg ccgacccagc tcgacattgc gccgaacagt gtggaaaccg cagtcagtcc
    10441 gggcagcccg ggcagcgggc gggatgccgt ctgacgaccg gtatgcagtg ttttgaatgc
    10501 gacggcggtt aaaaacagga tgaagaaaat ttgaagcccg aacgcgggga tatattttgc
    10561 ggagagtgcg ccagcgaata cgccgaatat catacccggc atcatcgcaa atatggtttt
    10621 ccagtcgacc gtctgttttt tgtgctgccc caacatactg gaaaaggcgg tgaagaccat
    10681 gacggcgaag gatgtgccga cggcgaggtg ttgcgcgtaa ggatgttgtg ccaaaccctg
    10741 caaatcaagc acccataaaa cgacagggac aatcagcgta ccgccgccta caccgaacag
    10801 gccggcaata aaacctgccg cactgcctac ggcaagcagg attaagataa tgtcccaatg
    10861 ccacatttaa tccgcctttc tgtatttttt ccaaaatcgg cgtgccgcca taatgtagcc
    10921 ggacaggctg tatccgagaa agaacaggaa aaggacgagc gacggttccc aagtgaccag
    10981 aagcagcagt aagacggcaa gcagcattcc gacaaagggg acttgtctgc ggatgttgat
    11041 ttctttaaaa ctccaaaaag ggatttggac aatcatcgac aggccggcaa acagtgtgat
    11101 gcctaatgcc caccagtgga cggcggggaa tttttcgacg ctgtggttga cccaaatcag
    11161 cccgacaatc agcgcggcgg cagtcggact gggtacgccg ataaaccagc gtttgtccac
    11221 cttgccgatg agcgtgttga acagcgcgag gcgtagggcg gcgcaggcgc agtagatgaa
    11281 ggcgacggaa taaccgattt tgccgaactg ccaaagctgc catttgtagg caataagcgc
    11341 gggggcaacg ccgaagctga ccatgtcggc aaggctgtcg agctgctccc cgaacgcgct
    11401 ttggctgttg gtcagccgcg ccacgcgccc gtccataccg tccagcagca tagagatgaa
    11461 taccgcgatg gcggcggttt cataacgtcc gtgcatggat tgggtaatgg cgtaaaacgc
    11521 ggaaaacagc gcggcgatgg taaaggaatt gggcagcagg tagatactgt tttgacgcag
    11581 ggagcgttgc ggggtgttgg tcggggtttc catagctgaa gtgtctcacg gacgtggaga
    11641 atcgataggg gattataacc caaaccatta tcgaacaata cgccctttag gatgaagccc
    11701 tcggaggcgg tttgtttttc tgatggcgga tgctttgcgg ggcggtttga ctctgcctgc
    11761 caccgggtgt gttgtttcgg attttgccgg atggatattg ttgccgggca tttctgcgct
    11821 tgccggaagg tatcggaggg aaggcatcgg aatatgcggc gcgccgttca aaccggggcg
    11881 gtatttccct attttcaggg agtttgtagg tttcaacaaa ttgaaagata ttttttgcat
    11941 ttccgaccgt atgctgattt tgaagcggga taaattatag gacaaggttt ttcgcccgcc
    12001 gcaaaggttg cccgcaatgc cgtctgaaaa caacggcttg ccgctaaggc ggcaatatga
    12061 ggatttgcgc tgccgaaacc ggtttgctac aacccggcag tgaaatctgc agggagggat
    12121 aggccgataa ggcgggactt atcttgtttt ttgtttataa tgcaacagaa tttggaggaa
    12181 ccgtcgggaa tttatcatga tgaaaaagat actggcagta tcggcactat gcctgatgac
    12241 tgcggcggca cgggctgccg atacttacgg ctatctcgcc gtttggcaga atccgcagga
    12301 tgcaaacgat gttttgcagg ttaaaaccac aaaagaagat tcggcgaaaa gcgaagcgtt
    12361 tgccgagttg gaagcctttt gcaaaggtca ggacacgctt gcgggcattg ccgaagacga
    12421 gccgaccgga tgccggtcgg tcgtgtcgct gaacaatacc tgtgtcgcgc tggcataccc
    12481 gaaagccttg ggcgcgatgc gcgttgaaaa cgccgtcgtg attacttctc cgcgttttac
    12541 gagcgttcat caggtcgcac tcaaccagtg cataaaaaaa tacggcgcac agggacaatg
    12601 cggcttggaa acagtgtatt gcacgtcatc ttcttattac ggcggggctg ttcgctcctt
    12661 aatccaacac ctgaaataaa aaatgccgtc tgaaggatgt tcggacggca tttccatatc
    12721 gacggtcagg attctttcgg atcgggcagc aggctgttca acacaatggc gagtacggcg
    12781 cacaagccca cgccgacaaa gctgaagctg cccaatttga gtgtcatacc gccgatgccc
    12841 gtggtcagta ccgagctgac gatgaccagg tttttcggca gcatcaaatc gactttggca
    12901 tcaatcaggg ttttgatgcc taaagaagca atcgtgccga acagcagcag cataatgccg
    12961 cccatcacgg gcatcggaat ggaagccaaa aacgcattga atttgccgaa aaacgccatg
    13021 cagacggcaa aaaccgccgc ccaagtcatg atgacggggt tgctgttttt ggtaatcatc
    13081 accgcacccg ttacttcgcc gtaggttgta accggcgggc cgccgatcag acctgcaacg
    13141 cacacgccca agccgtcgcc cgcaagggtt ttgtccaagc ccgggtcttt tgtgtagtct
    13201 tttcccgtta cattgccgat tgccatgatg ccgccgatgt gttcgatggc gggggcgacg
    13261 gcaacgggca gcataaacag tgccgcctgc cagttgacct gaggcgtttc aaaatgggga
    13321 acggcgaacc agggcgcgtg tgcaatgctt gtcgtgtcca ccagtcccat cagcagtgcc
    13381 aaaacataac ccgaagcgac accgatcaag atgggaatca gcttcatcat cctgctgccg
    13441 aaaaccgata cgatggcggt aacggcaaag gtaaagccgg aaagaatcag cgaatcggta
    13501 tagtcgatga cctgtttgcc gtcagcctga cccattgcca tgctgcttgc cgccacggca
    13561 acagacagac cgatgaccat gatgacaggg ccggtgacga ccggcggcag cagtttgtgt
    13621 accgccgcca gtccgcgcca acggatcagc gcggcaaaca caaaatacat aaagccggcg
    13681 gcaaacagcc cgaacatggt ggaaggcagc ccccattcgc cgacggagta gataatcggc
    13741 gcgataaagg caaacgaaga accgagaaaa atcggtactt tgcgtttggt tgtgatttgg
    13801 aacagcagcg ttcccaagcc tgcgcccaaa agcgcaagag ccggattcag accggtcagc
    13861 aggggaacca gcaccattgc gccgaatgcc acaaataaaa tctgcgcgcc ggaaacggca
    13921 agtttcagtt ggttcatacc atcttctttc aatcggttca aacggcacgg attatactgg
    13981 tttgccgagg ggctgcgtaa aaatacatac gtcgggcaaa gatatgccgt ctgaaaggca
    14041 acgtctgtct gttgcaggat gaaagcggga gaaatggagt ataatccgac actttccata
    14101 ttcaatccgc aagccgtccc gaacccttat ttcagacggc attttccggt aatacggcat
    14161 gacagaaaaa tcccataaaa aaacagcaaa aggcagggcg ggaagcccgt ccccaacgtc
    14221 cgcacgcaac aagaaagccg acaacggcgc gcggggcaat aaagtttccg agcggctcaa
    14281 ggcggtcaaa gagctgcaga aaactgaagc caaaaaggcg cgtcccgaac atgtcgtcaa
    14341 cctgattgcc gacgcgctgt ggctgatggg tttggcggca accctgtatt tggcgatttc
    14401 cctgatcagt ttcgatatgg gcgatccgtc ttggtcgcac agttcaccgg ttgtggaaga
    14461 tgccgccaat tggggcggac tgttcggcgc gtatgttgcc gatgtcggct attatctttt
    14521 cggctggtcg ttctggtggt ggatagcggc tgcctgcgtc gtgctgtata aaaatttccg
    14581 tctgcacgca aaacagacgg aaaacgaggc atacaaccac aaaatcgctg ccgccgcgct
    14641 gtttgtcctg acggtcttca gccccgtctt ggagtatttt gtgctgggcg gaaaatatgc
    14701 cgactccctg cctgtcggag caggcggtat ggtcggcata cgtgtcggcg cagtgtttgc
    14761 gtggctgttg gggaaatcgg gcagcctgct gattatcctg gttgttctgc tgttgtcgtt
    14821 gtccctgctg gtgcagattt catggctgga atttttgaac ggtgcgggca gggcggttca
    14881 aaaccgcctg agtgccttat ccggcaaggt catggctttg agaaaacgcc ggccgaatac
    14941 caaaacagac ggtgtcgata cccaaaatac acggcgcatg gtgaaagaag ccaaaaacat
    15001 cactgccaaa cccgttgcct tgcccgaagg cagcagcagc aaccgcaaat ccgtcgcggt
    15061 ttccgttgcg ccgccgccta aaatccaacc ttcgctgttt gaagacaatg aagtacagca
    15121 gaacggcgaa taccacaagc ctacattgaa cctattgcgg attcccgaca gcgagccggt
    15181 cagcatcaat cccgccgaat tggagcgcac tgccgaacta atcgaatcca aactggcaga
    15241 attcggcatc ggcgtacaag tcgtatccgc gacatccggc cccgtcatca cgcgctacga
    15301 aatcgaaccc gcgcaaggtg tcaaaggcag ccaaattgtt gccctgtcga aagatttggc
    15361 acgctctatg tcgctgcaat ccgtgcgtat cgtcgaaacc attgcgggca aaaacacgat
    15421 gggcatcgag ttgcccaacg acaaacgcca agacgtgatg ttgagcgaaa tcttgtcctc
    15481 gcccgtgttt gccgaagcca aatccaagct gaccgtcgcg ctgggcaaag acatcgccgg
    15541 tacgcccgtc gtcggcgact tggcgaaaat gccgcacctt ttggtcgcgg gcatgaccgg
    15601 ttcgggcaaa tccgtcggcg tgaacggcat gattatgtct atgcttttca aagctacgcc
    15661 cgaagaagtc cgcttcatta tgatagaccc gaaaatgctc gagttgagca tttacgacgg
    15721 cattccgcac ctactctgtc ccgtcgttac cgatatgcgc gaagcagggc aggcgttgaa
    15781 ctggtgcgtc gccgaaatgg aaaaacgcta ccgcctgctc tcccacgccg gtgtacgcaa
    15841 tctggaaggc ttcaaccaaa aagtcgaaca agccaaagcg gcaggcaagc cgctgctcaa
    15901 tccgttcagc ctgaacctcg acgaacctga gccactggaa aaactgccga tgatcgtggt
    15961 cgttatcgac gaacttgccg acctgatgat gaccgaacgc aaagctgtcg agcagcaaat
    16021 cgcccgcctc gcccaaaaag cgcgcgccgc cggcatacac atgattgtcg ccacccaacg
    16081 cccaagcgtc gatgtcgtaa ccggtctgat taaagccaac atcccgacgc gtatggcgtt
    16141 taccgtgcaa agcaaaatcg acagccgtac catcctcgac caaatgggcg cggacgaact
    16201 gctcaaatat ggcgattcgc tgttcctgca accgggcagt gccgaaccga cccgcctgca
    16261 aggcacgttt gtttcagacg gcgaagtgca tcaagtcgtc aactacgtca aatcgcaagc
    16321 cccagccgac tatattgaag gtctgctcag cggcgaagcc gcgctggaaa ctgccaatat
    16381 cgttaatccg aatgcagaca gcgacgaatt attcgatcag gcagtcgcct atgttttgga
    16441 aagcaaaaaa acctccattt cgtctttgca gcggcagttg cgtatcggct ataaccgcgc
    16501 ggcaaacctg atggaggcac tggaaaatgc gggtatcgtt tctccctccg acttcaacgg
    16561 cagccgtaaa attttggcgc acaaggacca tttatagccc gtatcgc
//
LOCUS       DAXFZM010000053        16557 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.053, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000053 DAXFZM010000000
VERSION     DAXFZM010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16557)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16557)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16557
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.053"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..101
                     /locus_tag="ACFJAG_001372"
     CDS             <1..101
                     /locus_tag="ACFJAG_001372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003685967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="carbohydrate kinase"
                     /protein_id="HFC3980639.1"
                     /translation="AFACALGALVASEHGATPDISAERIGRFINPV"
     gene            complement(161..716)
                     /locus_tag="ACFJAG_001373"
                     /pseudo
     CDS             complement(161..716)
                     /locus_tag="ACFJAG_001373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220495.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
     gene            complement(791..2425)
                     /locus_tag="ACFJAG_001374"
     CDS             complement(791..2425)
                     /locus_tag="ACFJAG_001374"
                     /EC_number="2.7.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0016776 - phosphotransferase activity,
                     phosphate group as acceptor [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:1900727 - osmoregulated periplasmic glucan
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase"
                     /protein_id="HFC3980640.1"
                     /translation="MIKPNLRPKLGSSALIAFLSLYSSLVLNYAFFAKVVELRPFNDT
                     GADIFLYTMPVVLFFLSNFVFHVIALPFVHKVLIPLILVISAAVSYQEIFFNIYFNKS
                     MLNNVLQTTAAESARLITPGYVLWIVCLGVLPALAYIAVKVKYRVWYKELLTRLVLAA
                     VSFLCALGIAMLQYQDYASFFRNNKSVTHLIVPSNFIGAGVSKYKDWKRSNIPYTQLD
                     MAVVQNRPAGSLRRFVVLVVGETTRAANWGLNGYSRQTTPLLAARGDEIVNFPQVRSC
                     GTSTAHSLPCMFSTFDRTDYDEIKAEHQDNLLDIVQRAGVEVTWLENDSGCKGVCGKV
                     PNTDVTSLNLPEYCRNGECLDNILLTKFDEALNKNDKDAVLILHTIGSHGPTYYERYT
                     EAERKFTPTCDTNEIDKCARATLVNTYDNTVLYVDQFIDKVIRKLENRDDLESAVYYV
                     SDHGESLGENGMYLHAAPYAIAPSGQTHIPMVMWFSKAFRQHGGIDFQCLKQKAAENE
                     YSHDHYFSTVLGLMDISNSQTYRKEMDILAACRRPR"
     gene            complement(2488..2826)
                     /locus_tag="ACFJAG_001375"
     CDS             complement(2488..2826)
                     /locus_tag="ACFJAG_001375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980641.1"
                     /translation="MIFKCRLNAFQTASAVSAFSGGVLEVVRLCCRRLSVLFNPGVML
                     FVPDCPVGGAAGFFQYEMLCPLFRQGRLQTGSNFAYDVFMSAGRLNGGRKPPRRLLVF
                     LPCFAPLPYN"
     gene            complement(2823..3929)
                     /gene="serC"
                     /locus_tag="ACFJAG_001376"
     CDS             complement(2823..3929)
                     /gene="serC"
                     /locus_tag="ACFJAG_001376"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004648 -
                     O-phospho-L-serine:2-oxoglutarate aminotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine transaminase"
                     /protein_id="HFC3980642.1"
                     /translation="MSLYPIYNFSAGPAVLPEAVLRTAQQEMSDYNGTGFPVMAMSHR
                     SEMFLSILHHAEQDLRQLLKIPDNYKILFLQGGATTQFNMAAMNLAHGFRTADAVVTG
                     NWSRIAYEQMSRLTDTEIRLAAHGGEQFDYLDLPPVETWDVAPDSAFVHFAVNETVNG
                     LQYREVPRLSDGMPPLVCDMSSEILSREFDVADYGLIYAGAQKNIGPAGVTVVIVRED
                     LLERCPNDIPDVFNYRSHLNRDGMYNTPSTYAIYMSGLVFRWLQAQGGVKKIEAVNRL
                     KAQTLYETIDGSGGFYINDIHPDARSKMNVVFKTASEDLDRRFVLEAELQGLCLLKGY
                     KSVGGMRASIYNAMPLEGVRALADFMRDFQRRYG"
     gene            4295..4726
                     /gene="rimP"
                     /locus_tag="ACFJAG_001377"
     CDS             4295..4726
                     /gene="rimP"
                     /locus_tag="ACFJAG_001377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003685973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0042274 - ribosomal small subunit
                     biogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HFC3980643.1"
                     /translation="MDIQTILEKTLPGLGYELVDFELAAQGTLRVFIDKEGGITVEDC
                     ATVSNHLSRVFMVEDIGYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIGGQK
                     NFIGKIEGCENDTVTVSFDGKTVQIELGNIDKARLRPEFKF"
     gene            4754..6256
                     /gene="nusA"
                     /locus_tag="ACFJAG_001378"
     CDS             4754..6256
                     /gene="nusA"
                     /locus_tag="ACFJAG_001378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor NusA"
                     /protein_id="HFC3980644.1"
                     /translation="MSREMLQLAEALASEKNVDAEVVFQALEFALSTAAKKKADREHM
                     DVRVQINRDTGEYQTFRRWLIVADEDYTYPDVEKTIEEIQEEIPDTTIQIGEYYEEQL
                     PNEGFGRQAAQTAKQIILQRIRDAEREQNLNEFLAVKEDIVSGTVKRVERHGIIVEVV
                     AGKLDALIPRDQMIPRENFRSGDRIRALFLRVEEIGNTGRKQIILSRTSGDFLVKLYA
                     NEVPEIAGGMLEIRAVARDPGQRAKVAVKANDQRIDPQGTCIGVRGSRVNAVSNELSG
                     ERIDVVLWSPEPAQFVMSALSPAEVSRIVIDEDKHAVDVIVAEDRLALAIGRGGQNVR
                     LASDLTGWQLNIMTSAEADERNAAEDAAIRRLFMNHLNVDEETADVLVQEGFATLEEV
                     AYVPAAELLAIEGFDEEIVDMLRNRARDAILTMAIAAEEKLGEVSDDMRNLEGVDADM
                     LLSLAEAGITTRDDLAELAVDELIEITGVNEETAKAVILTAREHWFTEDK"
     gene            6268..9099
                     /gene="infB"
                     /locus_tag="ACFJAG_001379"
     CDS             6268..9099
                     /gene="infB"
                     /locus_tag="ACFJAG_001379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HFC3980645.1"
                     /translation="MSNTTVEQFAAELKRPVEDLLKQLKEAGVSKNSGSDSLTLDDKQ
                     LLNAYLTKKNGSNGGTISIRRTKTEVSTVDGVKVETRKRGRTVNIPSAEELAAQVKAA
                     QTQAAPVQPEQTAEDAVKARAEAAARAEARAKAEAEAAKLKAAKAGNKAKPAAQKPTE
                     AKAETAPVAAETKPAEPKEKAVKPKHERNGKGKDAKKPAKPAAPAVPQPVVSAEEQAQ
                     RDEEARRAAALRAHQEALLKEKQERQARREAMKQQAEQQAKAAQEAKTGRQRPAKPAE
                     KPQAAAPAVENKPVNPAKAKKEDRRNRDDEGQGRNAKGKGAKGGRDRNNARNGGDERV
                     RGGKKGKKLKLEPNQHAFQAPTEPVVHEVLVPETITVADLAHKMAVKGVEVVKALMRM
                     GMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFLGEGAEAVEAEALPRPPVVTV
                     MGHVDHGKTSLLDYIRRAKVVQGEAGGITQHIGAYHVKTPRGVITFLDTPGHEAFTAM
                     RARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNKIDKDTANPERIRQ
                     ELTQHEVIPDDWGGTVQFIDVSAKKGTNIDALLEAVLLEAEVLELTAPVDAPAKGIIV
                     EARLDKGRGAVATLLVQNGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGPSIPVEI
                     LGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMGETQA
                     QSLSVIIKADVQGSYEALAGSLKKLSADEVKVNVLHSGVGGITESDVNLAIASGAFII
                     GFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEKKEQVTGTVEIRQ
                     VISVSKVGNIAGCMVTDGVVKRDSHIRLIRNNVVIHTGELASLKRYKDDVKEVRMGFE
                     CGLMLKGYNEIMEGDQLECFDIVEVARTL"
     gene            complement(9259..10599)
                     /locus_tag="ACFJAG_001380"
     CDS             complement(9259..10599)
                     /locus_tag="ACFJAG_001380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase/DUF3482 domain-containing protein"
                     /protein_id="HFC3980646.1"
                     /translation="MNKQPLSLAVVGHTNTGKTSLLRTLLRDSGFGEVRNAPSTTRHV
                     EEAAISDGADMLVFLYDTPGLEDAGGVLEWLENHTDNRSDGIERLQQFLGSHGAHHDF
                     NQEAKVLRQVLQSDMAMYVIDAREPVLDKYRDELTILSWCAKPVMPVFNFTGGQLPES
                     WTTMLARRNLHVFAGFDTVAFDFEGELRLWENLATMLPERSTLDRLTAMRRREWQRLD
                     GEARREIADFLLDAAAFRQEVDENEDTATVLQTMQAEIRQLERQMQQRLFALYRFYHS
                     EIDGGDWMPQAFRQDPFDSELLKQYGIRTGTGAATGALIGLGLDIATLGGSLGLGTAI
                     GGFLGGILPNTRTISDKLAGRQTLHTDPETLTLLAARALDLLHVLQTRGHAAQSDIEL
                     HSRKAPWDAAKLPPELNKARSHWKWSSLNTHRPETSRAERREYAEKIGIRLAGK"
     gene            complement(10673..12013)
                     /locus_tag="ACFJAG_001381"
     CDS             complement(10673..12013)
                     /locus_tag="ACFJAG_001381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2868 domain-containing protein"
                     /protein_id="HFC3980647.1"
                     /translation="MLNPSRKLVELVRILDEGGFIFSGDPVQATEALRCVDGSTEEKI
                     IRRAEMIDRDRMLRDTLERVRAGSFWLWVVAASMMFTAGFSGTYLLMDNQGLNFFLVL
                     AGVLGMNTLMLAVWLATLFLRVKVGRFFSSPATWFRGKGPVNQAVLRLYADQWRQPSV
                     RWKIGATAHSLWLCTLLGMLVSVLLLLLVRQYTFNWESTLLSNAASVRAVEMLAWLPS
                     KLGFPVPDARAVIEGRLNGNIADARAWSGLLVGSIVCYGILPRLLAWVVCKILLKTSE
                     NGLDLEKTYYQAVIRRWQNKITDADTRRETVSAVSPKIVLNDAPKWALMLETEWQDGQ
                     WFEGRLAQEWLDKGVAANREQVAALETELKQKPAQLLIGVRAQTVPDRGVLRQIVRLS
                     EAAQGGAVVQLLAEQGLSDDLSEKLEHWRNALTECGAAWLEPDRVAQEGRLKDQ"
     gene            12156..12782
                     /locus_tag="ACFJAG_001382"
     CDS             12156..12782
                     /locus_tag="ACFJAG_001382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin III family protein"
                     /protein_id="HFC3980648.1"
                     /translation="MYAGERFNTYSHLSGLILAAAGLVLMLLKTIGHGDGYRIFSVSV
                     YGISLLLLYLSSSLYHGIAAGKLKSILKKTDHCMIYVLIAGSYTPFALVSLRNGPGWT
                     VFSLSWLLAAAGIAQELTIGRKSEKRLLSIAIYIVMGWMVLAVMKSLTASLPPAGLAW
                     LAAGGMLYSVGIYWFVNDEKIRHGHGIWHLFVLGGSITQFVSVYGYVI"
     gene            complement(12847..14265)
                     /locus_tag="ACFJAG_001383"
     CDS             complement(12847..14265)
                     /locus_tag="ACFJAG_001383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005283 - amino acid:sodium symporter
                     activity [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine/glycine:cation symporter family protein"
                     /protein_id="HFC3980649.1"
                     /translation="MENILSVLVGTVNRFLWGYLLIYALLGIGLFFTLYLGAPQITKL
                     GAGFKSVFGGLFAKGDKDDKSLSQFQALAVAISAQIGTGNVAGVATAITAGGPGAIFW
                     MWLSAVLGMSTIFAEALLAQKYRVVSHGKYIGGPAFYITHGLTPKIGRGAARFLSGFF
                     SIALIVALGFIGNATQANSIASAVTIAFDVPSLAVGIVFAVLAGMVVIGGVNRIANIA
                     RFVVPFMAVVYILCAVVILFEFSDHIVPMFNHIFTAAFNPEAVLGGAAGIGMREAIRF
                     GVARGLFSNEAGMGSTPHAHATADVKHPVQQGMTAFVGVFIDTILVCTATALIILLTD
                     ANLSGEQGAAVTQFAFNKAFPGFGSQLLAVCLTFFAFTTIIGWYYFGESNIRFLFRGR
                     HLGIYRALVLLAIVLGTLGKVDLVWNLSDMFNGFMVIPNLIALFLLRKEIRAIYDDYL
                     MRKKAGQDLSYQYEFHEFHDKQ"
     gene            14592..15320
                     /locus_tag="ACFJAG_001384"
     CDS             14592..15320
                     /locus_tag="ACFJAG_001384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004285004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HFC3980650.1"
                     /translation="MAGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGGDPG
                     ANPRLRLALEKAAENNMPKDNVQRAIDKGTGNLEGVEYIELRYEGYGIGGAALMVDCL
                     TDNKTRTVADVRHAFTKNGGNLGTDGCVAFNFVHQGYLVFEPGVDEDELMEAALEAGA
                     EDVVTNDDGSIEVITAPNDWAGVKSALEAAGYKSVDGDVTMRAQNETELSGDDAVKMQ
                     KLIDALEDLDDVQDVYTSAVLNLD"
     gene            complement(15379..15867)
                     /locus_tag="ACFJAG_001385"
     CDS             complement(15379..15867)
                     /locus_tag="ACFJAG_001385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein B"
                     /protein_id="HFC3980651.1"
                     /translation="MTPLFRKAVWLLFAVSVCAFAGSLAAQYVLGMEPCVLCISQRLC
                     VLATALCAAVVLACKPKGRVGGLSGAVFISIPAVTGISVAAYQLWLQSLPPGAAPSCG
                     APWTFRLKGWPLFDWFEPVVRGFGNCAEPDYLLGVALPVWSAAYFLAVVLTVWWAWAR
                     AK"
     gene            complement(16296..>16557)
                     /locus_tag="ACFJAG_001386"
     CDS             complement(16296..>16557)
                     /locus_tag="ACFJAG_001386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980652.1"
                     /translation="RGEKSSCIKQLNGGNYPPFLICCQLFFENLPDRFKFCKKLARWL
                     SGNKFPQKPVNPIIQKIICFHRVSFSVETLPFRAVESDFIVD"
BASE COUNT         4344 a         4696 c         4215 g         3302 t
ORIGIN      
        1 aggcctttgc ctgcgcactt ggtgcgctgg tcgcctccga acatggcgca acacccgaca
       61 tttccgccga acgcatcggg cgtttcataa acccggttta aaacgcatgg aaaaatgccg
      121 tctgaaagcc tttcagacgg cattttgttt gagattccgt ttaccaatgg ctgacaaacg
      181 cttccaaatc ggtattcttg ggcttatgca cttcctctgt cggcgtgccg accatcatca
      241 gcccgatgtt tatccttatc ctcgcaaccg aaagcctccc gcaacaatgg gctgttgacc
      301 cacatccccg taatccagac attgtcgaat ccctgagccg ttgccgccag ttgcagcgca
      361 tacgccgcac aacccgccgt cagcatctgc tcccattccg gtttcggctt aggcacatcg
      421 cggttcggcg caaacgttac cccgatgacc atcggcgcca tattgcccac tttttccgcc
      481 tttttcatcg catcgtcgcc gaaattcagt tcggcaaccg tttgcttcaa cacatcgcga
      541 aaacgttgca atcctacctc gccttgaatc acggtaaaac ggaaggggcg catgttgccg
      601 tgatcggaaa cttgggttgc cgcctgcaat atttgttcca actccgccgc atcgggggcg
      661 gggtgcttca gctttttgga agatcggcgg ttcgtcaata attttaaagc atccatatcg
      721 ttatactccg gtcatcggtc gggtgtttcg gacacatatg ccgtgaaggc ttcagacggc
      781 atatccggca tcagcgcgga cggcgacagg ctgccaatat atccatttcc ttccgatagg
      841 tttggctgtt ggaaatgtcc atcagcccca ataccgtgct gaaatagtgg tcgtgcgaat
      901 attcgttttc cgccgctttt tgtttgaggc attggaaatc tatgcccccg tgttggcgga
      961 aggctttgga aaaccacata accatcggga tatgcgtctg tccggaaggc gcgatggcgt
     1021 aaggcgcggc gtgcaggtac atcccgtttt cgcccaaact ttcgccgtgg tcggaaacat
     1081 aatacaccgc gctttccaaa tcgtcgcggt tttcaagttt gcggataacc ttgtcgataa
     1141 actgatccac atacaaaacc gtattgtcgt aagtgttgac caacgtggcg cgggcgcatt
     1201 tgtcgatttc gttggtatcg catgtcggcg tgaatttgcg ctcggcttcg gtatagcgtt
     1261 cgtaatacgt cggcccgtgg ctgccgatgg tatgcaggat taaaaccgcg tctttatcgt
     1321 ttttgttgag ggcttcgtcg aacttggtca acaggatatt gtcgaggcac tcgccgttgc
     1381 ggcagtattc gggcaggttg agcgaggtaa cgtcggtatt cggcactttg ccgcacacgc
     1441 ccttgcagcc ggaatcgttt tccaaccaag taacttccac gccggcgcgc tgcacgatgt
     1501 ccagcaggtt gtcttggtgt tcggctttga tttcgtcata atccgtgcgg tcgaaggttg
     1561 agaacataca cggcagggag tgcgcggtcg atgtgccgca gcttctgacc tgcgggaaat
     1621 tgacaatttc atcgccgcgc gcggcaagca gcggcgtagt ttggcgactg taaccgttca
     1681 aaccccagtt ggcggcacgc gtggtctcgc ccacgaccag caccacgaaa cggcgcaggc
     1741 tgccggccgg ccggttttgc acgaccgcca tatccaattg cgtataagga atattggaac
     1801 gcttccaatc tttgtatttc gacacgcccg cgccgatgaa attagacggc acaatcagat
     1861 gggttactga tttattgttg cggaaaaacg aggcgtaatc ctgatattgc aacatcgcga
     1921 tgcccaacgc gcacaaaaag gaaacggcgg caagcacaag gcgcgtcaaa agctccttat
     1981 accaaacgcg gtatttgacc ttgacggcga tatatgccag cgcaggcaat acgcccaaac
     2041 atacaatcca cagcacatag cccggcgtaa tcaggcgcgc gctttccgcc gccgtggttt
     2101 gcaagacatt attcaacatc gacttgttga aatagatatt gaaaaatatt tcttggtaag
     2161 acaccgccgc actgataacc aatatcaatg gaatcaacac tttatgcaca aaaggcaggg
     2221 caatgacgtg aaaaacgaaa ttacttaaaa aaaacagcac caccggcatc gtatagagga
     2281 agatgtccgc cccggtgtcg ttaaaagggc gaagttcgac aactttggca aaaaaggcgt
     2341 aattcaatac cagcgaagaa tacagggaaa gaaaggcaat cagcgcggaa gagccgagct
     2401 tcggcctcag gttcggtttt atcatttgga atgtgtcgga taagggttgg aaaaggcatc
     2461 cggaatccgg attattgaaa aagattctta attataaggc aacggagcaa agcagggcaa
     2521 gaaaacgagt aggcggcgcg ggggtttccg cccgccattc aaacgtccgg cagacataaa
     2581 aacatcgtaa gcaaaattcg aaccggtctg caaccgcccc tgccggaaaa gcgggcaaag
     2641 catttcatat tggaaaaacc cggccgcgcc gccgacggga cagtccggca caaacagcat
     2701 cacgcccgga ttgaaaagga cggatagccg ccggcagcac aatcttacca cctccaaaac
     2761 gccgccggag aacgccgaaa cagccgatgc cgtctgaaac gcattcaggc ggcatttgaa
     2821 aatcaaccgt aacgccgttg gaaatcgcgc ataaaatctg ccaaagcccg cacgccttca
     2881 agcggcatcg cattataaat gctggcgcgc atcccgccga cagacttata gcccttcaac
     2941 aggcacaagc cctgcaattc ggcttccagc acaaaacggc ggtccaagtc ttcgcttgcg
     3001 gttttgaaga ccacgttcat tttggagcgc gcatcaggat gaatatcgtt gatgtaaaaa
     3061 ccgccgctgc catctatcgt ctcatacaag gtttgcgcct tcagccgatt gaccgcttca
     3121 atttttttca caccgccctg cgcctgcagc cagcggaaca ccagccccga catataaatc
     3181 gcgtaagttg acggcgtgtt gtacataccg tcgcggttca aatgagaacg gtagttgaac
     3241 acatcgggaa tatcgttcgg acaacgctcg agcaaatcct cacgcacaat caccaccgta
     3301 actcctgccg gcccgatgtt tttctgtgcg cctgcgtaaa tcagtccgta gtcggcaaca
     3361 tcaaactcac gcgacagaat ctcgctggac atatcgcaca ccaacggcgg catgccgtct
     3421 gaaaggcgcg gcacttcacg gtattgcagc ccgttgacag tttcattgac ggcaaaatgg
     3481 acaaacgccg aatcgggtgc aacatcccac gtttccacag gcggcaggtc gagatagtcg
     3541 aactgctcgc ccccgtgcgc cgccaaacgg atttccgtat cggtcaaacg gctcatctgt
     3601 tcataggcga tacggctcca gttacccgtt accaccgcgt cggcagtgcg gaaaccgtgt
     3661 gccagattca tggctgccat attaaattgg gttgttgctc cgccctgaag aaacaatatc
     3721 ttatagttgt cagggatttt caaaagctgc ctcaaatcct gttccgcatg atgcaggatg
     3781 cttaaaaaca tttccgaacg gtggctcatc gccatcacag gaaaacccgt accgttgtag
     3841 tccgacattt cctgctgcgc cgtcctcaac acagcttcag gcaacacggc agggccggcg
     3901 gaaaaattgt aaatcggata aagagacatg atgcagccct ggttctgaac aataacccgc
     3961 ccgattttag gcttgcagca ggctttgtgc aaggatggga aatacctgcc ctccgcccga
     4021 ttccatgccg cccgaacacg gaaaataata tcaatatatt gatttacaaa cataaaaatc
     4081 atgctagcga caaatagata catttgtttt gtcaacaata ttcacgattt cccattacaa
     4141 acctcccgta cacccgcttt tttccgtccc aaaaacacaa aataaatcaa cactttcatt
     4201 tctccgcaaa agcggttata atcacgccga tttttcaact tttgacgaaa aatggccacg
     4261 gggccatttt tttattatgt acatagggag cagcatggat attcaaacca tcctcgaaaa
     4321 aaccctgccc ggcctgggat acgaactggt cgatttcgaa ctggccgcgc aaggaacatt
     4381 gcgcgtgttc atcgacaaag aaggcggcat taccgtcgaa gactgcgcca ccgtcagcaa
     4441 ccacttgagc cgcgtcttca tggttgaaga catcggctac aaaaacctgg aaatttccag
     4501 ccccggactc gaccgcccct tgaaaaaagc cgccgacttc gtgcgctttg ccggtcagaa
     4561 tgccaaaatc aaaacccgcc tgccgatagg cggtcagaaa aactttatcg gtaaaatcga
     4621 aggctgcgaa aacgacactg ttaccgtttc cttcgacggc aaaaccgtac aaatcgaatt
     4681 gggcaacatc gacaaagccc gcctgcgccc cgaattcaaa ttctaaaaca cagcaatatt
     4741 ggagatgttc aaaatgagtc gtgaaatgtt acagctggca gaagcactgg caagcgaaaa
     4801 aaacgttgat gcggaagtcg tcttccaagc actggaattc gcactctcta ccgccgccaa
     4861 gaaaaaggca gaccgcgaac acatggacgt gcgcgtccaa atcaaccgcg ataccggcga
     4921 ataccaaacc ttccgccgct ggctgattgt ggccgatgaa gactatacct atcccgatgt
     4981 cgaaaaaacc atcgaggaaa tccaagagga aatccccgat acgaccatcc aaatcggcga
     5041 atactacgaa gagcagctgc ccaacgaagg cttcggccgc caagcggcgc aaactgccaa
     5101 acaaatcatc ctgcaacgca tccgcgatgc cgagcgcgag cagaatctga acgagttcct
     5161 cgccgtcaaa gaagacatcg tgtccggcac ggtcaaacgc gtcgaacgcc acggcatcat
     5221 cgtcgaagtc gttgccggca aactggacgc gctgattccg cgcgaccaaa tgattccgcg
     5281 cgaaaacttc cgcagcggcg accgcatccg cgccctcttc ctgcgcgtcg aagaaatcgg
     5341 caacaccggc cgcaaacaaa tcatcctgag ccgtacttcc ggcgatttcc tcgtcaaact
     5401 gtacgccaat gaagtacctg aaattgcagg cggcatgctt gaaatccgcg ctgtcgcccg
     5461 cgacccgggc caacgtgcca aagtcgccgt caaagccaac gaccagcgca tcgatccgca
     5521 aggcacctgt atcggcgttc gcggttcgcg tgtcaatgcc gtcagcaatg aattgtccgg
     5581 cgagcgcatc gacgttgtcc tttggtcgcc cgagcctgcc caattcgtca tgagcgcgct
     5641 ctcacccgcc gaagtcagcc gcatcgtcat cgacgaagac aaacacgccg tcgatgtcat
     5701 cgttgccgag gaccggctcg cgctcgccat cgggcgcggc ggtcaaaacg tgcgccttgc
     5761 ttccgacctg accggctggc agctcaacat catgacttcc gccgaagcag acgaacgcaa
     5821 tgcggcagaa gatgccgcca tccgccgcct gtttatgaat cacttgaatg tagatgaaga
     5881 aaccgccgac gtactggttc aagaaggttt tgcaaccttg gaagaagtcg cctatgttcc
     5941 tgccgccgaa ctgcttgcca ttgaaggatt tgacgaagaa atcgtcgata tgctccgcaa
     6001 ccgtgcccgc gatgccatcc tgaccatggc gattgctgcc gaagaaaaac tgggcgaagt
     6061 gtccgacgat atgcgtaacc tcgaaggcgt agatgccgat atgctcctca gccttgccga
     6121 agcaggcatt accacccgcg acgacttggc agagcttgcc gtggacgaac tgattgaaat
     6181 caccggtgta aacgaagaaa ctgcaaaagc cgtcatcctg accgcacgcg aacactggtt
     6241 taccgaagac aaataaaggg ggtacagatg agtaacacaa ccgtagaaca atttgccgcc
     6301 gagctgaaac gccccgtcga agacctgttg aaacagttga aagaagccgg cgtcagcaaa
     6361 aacagcggca gcgattccct gacgctggac gacaaacagc ttctgaacgc ctacctgacc
     6421 aagaaaaacg gcagcaacgg cggcaccatc agcatccgcc gcaccaaaac cgaagtcagc
     6481 accgttgacg gcgtaaaagt cgaaacacgc aaacgcggac gcactgtcaa cattccttct
     6541 gccgaagaat tggcagcaca agtaaaagcc gcccaaaccc aagccgcacc tgttcagccg
     6601 gagcagacgg cagaagacgc ggtaaaagcc cgagccgaag ctgccgcacg cgcagaagcc
     6661 cgtgccaagg cagaagcgga agcggcaaaa ctgaaagcgg caaaagcagg caacaaagcc
     6721 aaacctgccg cgcagaaacc taccgaagca aaagccgaaa ccgcacccgt tgcggcggaa
     6781 accaaacccg ccgagcccaa agaaaaagcc gtcaagccga aacacgagcg aaacggcaaa
     6841 ggcaaagatg ccaaaaaacc ggcgaaacct gccgcacctg ccgtgccgca acccgtggtc
     6901 agcgcggaag aacaggcgca acgcgacgaa gaggcgcgcc gcgccgccgc attgcgcgcc
     6961 caccaggaag ccctgttgaa agagaaacag gaacgccagg cacgtcgcga agccatgaaa
     7021 caacaggcag aacaacaggc aaaagccgca caggaagcca aaaccggcag acagcgtccc
     7081 gccaaacctg ccgagaaacc gcaggcagcc gcaccggccg tcgaaaacaa acctgtcaat
     7141 ccggcaaaag cgaaaaaaga agaccgccgc aaccgcgatg acgaaggtca aggccgcaac
     7201 gccaaaggca aaggtgcaaa aggcgggcgt gaccgcaaca atgcccgcaa cggcggcgac
     7261 gagcgcgtac gcggcggcaa gaaaggcaaa aaactcaaac tcgagccgaa ccaacacgcc
     7321 ttccaagcac cgaccgaacc cgtcgtacac gaggttttgg ttcccgaaac cattaccgtt
     7381 gccgatttgg cgcacaaaat ggcggtcaaa ggcgtggaag tggtcaaagc cctgatgagg
     7441 atgggcatga tggttaccat caaccaatcc atcgaccaag acaccgccct gattgtcgtc
     7501 gaagaactcg gacacatcgg caaacccgcc gccgccgacg atcccgaagc cttcttgggc
     7561 gagggcgcgg aagcggtgga agccgaagca ttgccgcgtc cgcccgtcgt taccgtcatg
     7621 ggccacgtcg accacggcaa aacctcgctg ctggactaca tccgccgcgc caaagtggta
     7681 cagggcgaag cgggcggcat tacgcagcac atcggcgcgt accacgtcaa aaccccgcgc
     7741 ggcgtgatta ccttcttgga caccccgggc cacgaagcct ttaccgctat gcgcgcgcgc
     7801 ggcgcgaaag caaccgatat cgtgattctt gtggtcgccg ccgacgacgg cgtgatgccg
     7861 caaaccatcg aggcaattgc ccacgctaaa gcggcaggcg ttccgattgt ggttgccgtc
     7921 aataaaatcg ataaagacac tgccaacccc gaacgcatcc gtcaggaact gacccaacac
     7981 gaagtcatcc ccgacgattg gggcggcacg gttcaattca tcgacgtttc cgcgaaaaaa
     8041 ggaacgaaca tcgacgcgct gctcgaagcc gtattgctcg aagccgaagt attggaactg
     8101 accgcacctg tcgatgcacc cgccaaaggc atcatcgtcg aggcgcgttt ggacaaagga
     8161 cgcggcgcgg ttgccacatt gctggttcaa aacggtacgc tgaaaaaagg cgacatgctg
     8221 ctggccggta cggcattcgg caaaatccgc gcgatggtcg atgaaaacgg caaatccatt
     8281 accgaagccg gcccgtccat ccccgtcgaa atcctcggct tgtccgacgt accgaatgcg
     8341 ggtgaagacg cgatggtatt ggcggacgag aaaaaagcgc gcgaaatcgc cctcttccgc
     8401 caaggcaaat accgcgacgt gcgccttgcc aaacagcagg cggcgaagct ggaaaatatg
     8461 ttcaacaata tgggcgaaac ccaggcccaa tctttgtcgg tcatcatcaa ggcagacgtt
     8521 cagggctctt acgaggcttt ggcgggcagc ctgaaaaaac tgtccgccga cgaggtgaaa
     8581 gtgaacgtgt tgcacagcgg cgtgggcggc attaccgaat cggatgtcaa ccttgccatc
     8641 gcttcgggcg cgttcattat cggctttaac gtgcgtgcag atgcctcttc gcgcaaactt
     8701 gccgaaaatg aaaacgtgga aatccgctac tacaacatca tctacgatgc catcgacgac
     8761 gtgaaggcgg cgatgagcgg catgctttct cccgaaaaga aagaacaggt taccggtacg
     8821 gtcgaaatcc gtcaggtcat ctccgtttcc aaggtcggca acattgcagg ctgtatggtc
     8881 accgacggcg tggtcaaacg cgattcccat atccgcctca tccgcaacaa cgtggtcatc
     8941 cacacgggcg aactggcttc gttgaaacgc tataaagacg acgtaaaaga agtccgcatg
     9001 ggcttcgagt gcggtctgat gctcaaaggc tacaacgaaa tcatggaagg cgaccaactg
     9061 gaatgcttcg acatcgtcga agttgcccgc accctgtaat tcctttgcaa ataaaatgcc
     9121 gtctgaagcg ttcagacggc aacgaaacgg gttctgtatc atacagaacc cgttttttgt
     9181 cgcaaatcgg cttcagcgac cctcctgcct tattccgatt tgaatctgac ttgccataca
     9241 aacaggcttc agacggcatt atttgcccgc caaacgtatc ccgatcttct ccgcatattc
     9301 cctgcgttcg gcgcggctgg tttccgggcg gtgcgtattg agcgacgacc atttccaatg
     9361 actgcgggct ttgttgagtt cgggcgggag tttggcggca tcccacgggg ctttgcggct
     9421 gtgcagctcg atatccgact gtgccgcgtg tccgcgcgtt tgcaggacgt ggagcagatc
     9481 gagggcgcgg gcggcgagca gggtcagggt ttcagggtcg gtgtgcaggg tttgacggcc
     9541 ggcgagtttg tcggaaatgg tgcgggtatt gggcaggatg ccgcccaaaa agccgccgat
     9601 tgccgtaccc aatccgagcg agccgccgag tgtggcgatg tccagcccca agccgatgag
     9661 cgcgccggtt gccgcgcccg tgccggtgcg gatgccgtat tgtttgagca attcgctgtc
     9721 gaacgggtct tggcggaagg cttgcggcat ccagtcgccg ccgtcgattt cgctgtggta
     9781 gaaacggtaa agggcaaaca gccgctgctg catctgccgt tcgagttggc gtatttccgc
     9841 ctgcatggtt tgcagcacgg tggcggtatc ctcgttttcg tccacttcct gcctgaaggc
     9901 ggcggcatcg agcaggaaat cggcgatttc gcggcgcgct tcgccgtcca gccgctgcca
     9961 ttcgcgccgg cgcatggctg tcaggcggtc aagtgtgctg cgttcgggca acatggtggc
    10021 gaggttttcc cacaggcgca attcgccttc aaaatcaaag gcgacggtgt cgaaccctgc
    10081 gaaaacgtgc aggtttctcc tcgccagcat ggttgtccac gattcgggaa gctgtccgcc
    10141 ggtaaagttg aacacgggca taaccggttt ggcacaccat gaaaggatgg tcaattcatc
    10201 ccgatatttg tcgaggacgg gttcgcgcgc gtcgatgacg tacattgcca tatcgctttg
    10261 caaaacctgc cgcagcactt tggcttcttg gttgaaatcg tgatgcgcgc cgtggctgcc
    10321 gagaaactgt tgcagccgct cgatgccgtc tgaacgattg tccgtatggt tttccagcca
    10381 ttccaaaaca ccgcccgcgt cttcgagtcc gggcgtgtca tacaggaaaa ccaacatgtc
    10441 cgcgccgtcg ctgatggcgg cttcttcgac atggcgtgtg gtggacggtg cgtttctgac
    10501 ttcgccgaag ccgctgtcgc gcaacagggt gcgcaggagc gaggttttgc cggtgttggt
    10561 gtgtcccacg acggcgaggg aaaggggttg tttgttcatg atgtttttga agaatggatt
    10621 ttcagacggt cttttttcag aatggcggct taacagaaca tttcaagtga gtttattggt
    10681 ctttcaaacg gccttcctgc gccaccctgt caggctcaag ccacgccgcg ccgcattcgg
    10741 tcagcgcgtt acgccaatgt tccagctttt ccgaaaggtc gtctgaaagc ccctgttccg
    10801 ccaaaagctg caccaccgcg ccgccctgcg ccgcttccga aagccgcaca atctgccgca
    10861 gcacgccccg gtccggcaca gtttgggcgc gtacgccgat aagcagttgc gccggtttct
    10921 gcttcagctc tgtctccagc gcggcaacct gttcccgatt ggcggcaacg cccttatcca
    10981 gccattcctg cgccagcctg ccctcgaacc attggccgtc ctgccactcg gtctccagca
    11041 tgagcgccca tttcggcgca tcgttcaaga cgattttcgg cgaaacggcg gacacggttt
    11101 cccgacgcgt atccgcatcg gtgattttgt tctgccagcg gcggatgacc gcctgataat
    11161 aggttttttc caaatccaat ccgttttcgc ttgttttcaa aaggatttta cacactaccc
    11221 aagccaagag gcgcggcagg atgccgtagc agacgatact gccgaccagc agccccgacc
    11281 aagcccgcgc atcggcaata ttgccgttca gacgaccttc gatgaccgcc cgcgcatcgg
    11341 ggacagggaa accgagtttc gacggcagcc atgccaacat ttccaccgcg cgtaccgaag
    11401 cggcattgct caacagcgtg ctttcccagt tgaacgtata ttgccgcacc aaaagcagca
    11461 gcaataccga caccagcatt ccgagcagcg tgcagagcca caagctgtgc gccgttgcgc
    11521 ctattttcca tcgtaccgaa ggttgccgcc actggtccgc atacagccgc aacaccgcct
    11581 gatttacagg gcctttgccc cgaaaccacg tcgccggact gctgaaaaac cgccccactt
    11641 tcacgcgcag gaacaacgtt gccaaccata ctgccagcat cagcgtattc atgcccaaca
    11701 ctcccgccaa aactaaaaag aaattcagcc cctgattgtc catcagaaga taagtgcctg
    11761 aaaatccggc ggtaaacatc atcgatgccg ccaccaccca taaccagaac gaccccgcac
    11821 gcacacgttc caacgtgtcc cgcagcatac ggtccctgtc gatcatctcc gcccgacgga
    11881 tgattttttc ctccgtactg ccgtccacgc agcgcaaagc ctccgtcgcc tgcacgggat
    11941 cgccgctgaa aataaaaccg ccttcatcca aaatacggac cagctcaacc agttttcggg
    12001 atggattcaa cataaaatgc cgtctgaaaa taaaaaacag attttaacac acgcattttc
    12061 aagaatattc acagtgtagg caaagagtaa atcccacaca gaggcaaaag tatcggcgta
    12121 aactgactgc ctctactttc ccgaaagatt gtgcgatgta tgcaggcgaa cgcttcaata
    12181 cttacagcca tttgagcggt ttgattctgg cggcggcagg tttggtgctg atgctgctga
    12241 aaaccatagg acacggggac ggctaccgta tcttcagcgt atcggtttac ggcatcagcc
    12301 ttcttctgct ctatttgagt tcctcgctgt accacggaat tgcagccgga aaactgaaaa
    12361 gcattttgaa aaaaaccgac cactgcatga tttatgtgct gattgccgga agctacacac
    12421 cgtttgcact ggtttcttta cgaaacgggc cgggctggac ggtattttca ctgtcctggc
    12481 tgctggcggc tgcaggaatc gcacaagaac tcaccatcgg acggaaaagc gaaaaacgtc
    12541 tgctgtctat tgcgatttat atcgtaatgg gctggatggt cttggcggta atgaaatccc
    12601 tgacagcctc actcccgccg gcaggactgg cttggctggc ggcaggcggt atgctgtaca
    12661 gcgtcggcat ttactggttt gtaaacgatg aaaaaatccg acacgggcac ggaatctggc
    12721 atctgttcgt attgggcggc agcataaccc aatttgtcag cgtgtacggt tatgtaatct
    12781 gaatgccgtc tgaaacacaa aaacctccca aacctgaagg cagggaggtt ttctctttgc
    12841 cgggcattat tgtttatcgt ggaactcgtg gaattcatac tgataggata aatcctgtcc
    12901 cgcctttttc cgcatcaggt agtcatcata aatggcgcgg atttccttac gcagcaagaa
    12961 cagggcaatc aggttgggga taaccataaa gccgttgaac atatcggaca gattccaaac
    13021 caaatcgact ttgccgagcg tacccaaaac gatagcaagc agaaccaatg cgcgatagat
    13081 gcccaagtgt cttcccctga aaagaaaacg gatgttggac tcgccgaaat aataccagcc
    13141 gataatggtc gtaaaggcga agaaggtcag acacacggca agcaattgcg aaccgaagcc
    13201 cggaaatgcc ttgttaaagg caaattgagt aaccgccgcg ccctgttcgc ccgaaaggtt
    13261 ggcatcggtc agcaggataa tcaatgccgt agccgtacat accaaaatcg tatcgataaa
    13321 tacaccgaca aatgccgtca taccttgctg aacaggatgc ttcacatccg cagtcgcgtg
    13381 ggcgtgcgga gtcgaaccca tacctgcttc gttggaaaac agaccgcgcg ccacgccgaa
    13441 acgtatcgct tcacgcatac cgatacccgc agcaccgccc aaaacggcct cgggattgaa
    13501 ggcggcggta aagatgtggt tgaacatcgg cacaatatgg tcggaaaatt caaacaggat
    13561 aacgacggcg cacaaaatat aaacaaccgc cataaacggc acgacaaacc gggcaatatt
    13621 ggcaatacgg ttcacgccgc caatcacaac catgcccgca aggacggcaa acacaatacc
    13681 gactgccaaa gaaggcacat caaatgcaat ggtaacggca gaagcgatgg aatttgcctg
    13741 agtcgcattg ccgataaagc ccaacgcgac aatcagcgcg atggagaaaa agcccgacag
    13801 gaaacgcgcc gcgcccctgc cgattttcgg agtcagaccg tgcgtaatat aaaacgccgg
    13861 cccgccgatg tatttgccgt ggctgacgac gcggtatttc tgcgccagca gtgcttccgc
    13921 aaaaatcgtg gacatcccca aaacggcaga aagccacatc caaaaaatcg cacccggccc
    13981 gcctgcggta atggcggtcg ccacaccggc gacgttgccc gtaccgattt gcgcggatat
    14041 agcaaccgcc aacgcctgaa actgcgataa ggacttatcg tctttatcac ctttggcaaa
    14101 caagccgccg aatacggatt tgaatcccgc gcccagcttg gtaatctgcg gcgcaccaag
    14161 atacagcgta aaaaacaggc cgatacccaa aagcgcataa atcagcaggt agccccaaag
    14221 aaaccgattg actgtaccca ccagaacaga caatatattt tccataaaat aaaccttatc
    14281 ttacgattaa aatgactgtt ttccaaaaga cattccaata aggaaacacg gcgagcagac
    14341 cgtatttgcc gcaacagatg ccttaaattg tcaataatcc gagagaagct gtgccagcat
    14401 accgtaaaat atcgttaatt aaaatatttc tttattttta agcggaaagc ggaggaaatc
    14461 gttttcagac ggtatcgaca acggcacggc ataaaacagg atattttggg tacttgcaac
    14521 ttatgttaaa atgccgaccg taaaaaatct gacaaaaaca gattaattat ttgaaataag
    14581 aaaggaaatt tatggcaggc catagcaagt gggcgaatat ccagcataaa aaagcccgtc
    14641 aggatgccaa acgcggcaaa atcttcaccc gtttaatcaa agaaatcacc gttgcggcgc
    14701 gtatgggcgg cggcgatccc ggcgcaaatc cgcgcctgcg tctggctttg gaaaaagcag
    14761 ccgaaaacaa tatgcccaaa gacaatgtgc aacgcgccat cgacaaaggt acgggtaact
    14821 tggaaggcgt ggaatacatc gagttgcgct acgaaggcta cggcatcggc ggcgcagctt
    14881 tgatggtgga ctgcctgacc gacaacaaaa cccgcaccgt tgcggacgta cgccacgcat
    14941 ttaccaaaaa cggcggcaac ttgggtaccg acggctgcgt ggcgttcaac ttcgtgcatc
    15001 agggctattt ggtattcgaa cccggcgttg acgaagacga gctgatggaa gcggctttgg
    15061 aagccggtgc ggaagacgtg gttaccaacg acgacggttc catcgaagtc attaccgcgc
    15121 caaatgattg ggcgggcgta aaatccgctt tggaggcggc aggttacaaa tccgttgacg
    15181 gcgacgttac gatgcgcgcc caaaacgaaa ccgaactctc cggcgacgat gccgtcaaaa
    15241 tgcaaaaact gattgacgcg ctggaagact tggacgacgt gcaagacgtt tacacttccg
    15301 ccgtattgaa tctggactga tacgcagcac agcagacata caacaaaatg ccgtctgaac
    15361 ctttcagacg gcattgattt atttagccct tgcccacgcc caccaaaccg tcaggacaac
    15421 cgccaaaaaa tacgccgcgc tccaaacagg caaagcaacc cctaacagat aatccggttc
    15481 ggcacaattt ccgaacccgc gcacaacagg ctcgaaccaa tcaaacaaag gccagccctt
    15541 caatcgaaac gtccacggcg cgccgcacga aggagccgca cccggcggca gcgactgcaa
    15601 ccacaactga tatgccgcaa cagaaatacc cgtaacggcg ggaatactga taaacactgc
    15661 gcctgacagt ccgcccaccc tgcccttggg cttacacgcc agcacaactg ccgcacacaa
    15721 tgcggttgcc aaaacacata accgctgact gatgcacaaa acgcaaggct ccatacccaa
    15781 aacatactgt gccgccaaag aaccggcaaa tgcacagacc gaaacggcaa acagcagcca
    15841 aacggctttt ctaaataacg gggtcatttt ctcaacacac caatcaaaat accgatatgc
    15901 cgattttgct ggatatatcc cgagatggca agggacgaat cgacaccggc acaggtgcgg
    15961 acgatttcgg ttttcccgat atgcacaaaa cctgacaaag gacaaaacgg cgatttgtcc
    16021 gcacaatgcc cgaaaaaata catccggagg atttgaattt gaatttcggc aaatttagcg
    16081 aatcaaaagc aacagccgat aaaaaaatca aaagtttatt tcaatgtttc aacacacagg
    16141 acgacacata aagcaccgcc ctatgtgccg tcctgatttg gaaggggtta cacccctccc
    16201 aaatatagtg gattaacaaa aaccggtacg gcgttgcctc gccttgccgt actatttgta
    16261 ctgtctgcgg cttcgccgcc ttgtcctgat ttttgttaat ccactataaa gtctgattct
    16321 accgccctaa agggcagggt ttcaaccgaa aaggaaacac gatgaaagca tatgattttt
    16381 tgaataatcg gattgacggg tttttgaggg aatttgttac cggatagcca tcgggcaagt
    16441 tttttgcaaa atttgaatcg gtcgggtaaa ttttcaaaaa ataattgaca gcagataaga
    16501 aacggcggat aattaccgcc gttgagttgc ttgatgcagc ttgatttttc tcctcta
//
LOCUS       DAXFZM010000054        16513 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.054, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000054 DAXFZM010000000
VERSION     DAXFZM010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16513)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16513)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16513
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.054"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            113..2140
                     /locus_tag="ACFJAG_001387"
     CDS             113..2140
                     /locus_tag="ACFJAG_001387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter"
                     /protein_id="HFC3980653.1"
                     /translation="MSLSEFIERRTSFNPMVILTTLFFVCVLVVLVLTVPDQVQMWLD
                     RAKEVIFTEFSWFYVLTFSIFLGFLLILSVSGLGNIRLGRDEDVPEFGFLSWLAMLFA
                     AGMGVGLMFFGVAEPLMHYFSDITVGAPEHRQQQALLHTVFHWGVHAWSVYGTIALAL
                     AYFGFRYKLPLALRSCFYPLLKEKISGRFGDAIDIMALLATFFGIITTLGFGASQLGA
                     GLQEMGWIAENSFGVQVLIIAAVMSLAVVSAISGVGKGVKVLSELNLGLAFLLLFFVL
                     AAGPTVYLLSAFGDNIGNYLGNLVRLSLKTYAYEREHKPWFESWTVLYWAWWCSWAPF
                     VGLFIARISKGRTIREFVFGVLLIPGLFGVLWFTVFGNTAIWLNDGVAGGMLEKMTSS
                     PETLLFKFFNYLPLPELTSIVSLLVISLFFVTSADSGIYVLNNITSRDKGLSAPRWQA
                     VMWGVLMSAVAVLLMRSGGLGNLQSMTLIVSLPFALLMLIMCFSLWKGLSADKKYFET
                     RVNPTSVFWTGGKWKERLVRIMSQTQEQDILKFLKHTASPAMHELQRELSEEYGLSVR
                     VDKMFHQDEPAIEFVIRKETMRDFMYGIKSVGQDVSDQLINDGKLPHIRHQTTYKPYA
                     YFFDGRVGYDVQYMNKDELIADILKNYERYLMLLDDVGQELMAHEQVELAE"
     gene            complement(2229..3782)
                     /locus_tag="ACFJAG_001388"
     CDS             complement(2229..3782)
                     /locus_tag="ACFJAG_001388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid--CoA ligase"
                     /protein_id="HFC3980654.1"
                     /translation="MNRTYANFYEMLAAACRKNGNGTAVFDGKEKTAYRALKQEAEAV
                     AAYLQNIGVKFGDTVALAVSNSTEFITAYFAVSAIGAVAVPMNTFLKNSEYAYILNDC
                     KARFLFASAGLSKELAGLKAQTPVEKIIWTDKSRPAGETAEGDAFFENVRRFPEKPDL
                     DRQPRINDLAHIIYTSGTTGHPKGALISYANLFANLNGIERIFKISKRDRFIVFLPMF
                     HSFTLTAMVLLPIYMACSIILVKSVFPFSNVLKQALLKRATVFLGVPAIYTAMSKAKI
                     PWYFRWFNRIRLFISGGAPLAEQTILDFKAKFPRAKLLEGYGLSEASPVVAVNTPERQ
                     KARSVGIPLPGLEAKAVDEELVEVPRGEVGELIVRGGSVMRGYLNMPAATDETIVNGW
                     LKTGDFVTIDEDGFIFIVDRKKDLIISKGQNVYPREIEEEIYKLDAVEAAAVIGVKDR
                     YADEEIVAFVQLKEGMDLGEDEIRRHLRTVLANFKIPKQIHFKDGLPRNATGKVLKRV
                     LKEQFDGNK"
     gene            3833..3961
                     /locus_tag="ACFJAG_001389"
     CDS             3833..3961
                     /locus_tag="ACFJAG_001389"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980655.1"
                     /translation="MPSENGRRQFIIFAFRRHIKRRLCAACRRFAPVLPMSDLNAV"
     gene            complement(4033..5226)
                     /locus_tag="ACFJAG_001390"
     CDS             complement(4033..5226)
                     /locus_tag="ACFJAG_001390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HFC3980656.1"
                     /translation="MNPKHFIAFSALFAATQAEALPVASVSPDTVTVSPSAPYTDTNG
                     LLTDYGNAAASPWMKKLRSVAQGSGETFRILQIGDSHTAGDFFTDALRKRLQKTWGDG
                     GIGWVYPANVKGQRMAAVRHSGNWQSFTSRNNTGDFPLGGILAQTGSGGGMTLTASDG
                     KTGKQRVSLFAKPLLAEQTLTVNGNTVSANGGGWQVLDTGAALPLAIQTEMPWDIGFI
                     NIENPAGGITVSAMGINGAQLTQWSKWRADRMNDLAQTGADLVILSYGTNEAFNNNID
                     IADTEQKWLDTVRQIRDSLPAAGILIIGAPESLKNTLGVCGTRPVLLTEVQQMQRRVA
                     RQGQTMFWSWQNAMGGICSMKNWLNQGWAAKDGVHFSAQGYRRAAEMLADSLEELVRA
                     AAIRQ"
     gene            complement(5223..6206)
                     /gene="patB"
                     /locus_tag="ACFJAG_001391"
     CDS             complement(5223..6206)
                     /gene="patB"
                     /locus_tag="ACFJAG_001391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan O-acetyltransferase PatB"
                     /protein_id="HFC3980657.1"
                     /translation="MKNFLSLFASILMSALIAVWFSQNPINAYWQQTYHRNSPLEPLA
                     AYGWWRSGAALQENAYALSDGIKTFLSGETPPTAQDGGSADMPPEAAASEAAPPAGGT
                     EWKQGTEAAAVRSGDKVFFAGDSLMQGVAPFVQKSLKQQYGIESANLSKQSTGLSYPS
                     FFDWPKTIEETLKKHPEISVLAVFLGPNDPWDFPVGKRYLKFASDEWAQEYLKRVDRI
                     LEAAHTHRVQVVWLGIPYMKKVKLDGQMRYLDKLLSEHLKGKIILIPTAQTLSGGKGR
                     YTDSVNVNGKPVRYRSKDGIHFTAEGQKLLAEKIMEKIVFEPSTQPSSTQP"
     gene            complement(6217..7653)
                     /locus_tag="ACFJAG_001392"
     CDS             complement(6217..7653)
                     /locus_tag="ACFJAG_001392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBOAT family protein"
                     /protein_id="HFC3980658.1"
                     /translation="MPLLSVEFALFFIVFLPIYWGFAKYPSVQNLLLLAAGMGWLYHI
                     SPVFAAIIVLYSSCVYLLGELLRSDRESTRRFWLGCGIAASITVLGFFKYFDFFRPLI
                     AQYAGKGGAIDILMPLGLSYYTFQSVAYLVYCFRAPHAARFGWHELLLHLSFFPTVTS
                     GPIIRAAAFKSTDGEQAGALAQIRTRRPRSPVRPALAVSLILLGIAKKWWLAGILAEN
                     WVSPVFENPAQFDGWGVLAGVYGYTFQLFLDFSGYSDLVIGMAMLLGFRLPKNFSAPL
                     RAANIRAFWDKWHISLSTWIRDYIYIPLGGSKKGFLRTQLNLMAAMVLSGIWHGYGWN
                     FLIWGALHGTALALLNTGDRYFGRDALCRLKYLAPLSWFVTFHFVCLSFLVFNTANPD
                     DAGAVFSALFANAGGWNAPQRADMLLLASFASLMLLYPYLQRAFDGTVKGLEKIPMWL
                     WFIQISIILLLIIVLAPSGIPGFIYANF"
     gene            complement(7782..8947)
                     /locus_tag="ACFJAG_001393"
                     /pseudo
     CDS             complement(7782..8947)
                     /locus_tag="ACFJAG_001393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713084.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transporter"
     gene            9388..9600
                     /locus_tag="ACFJAG_001394"
     CDS             9388..9600
                     /locus_tag="ACFJAG_001394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy-metal-associated domain-containing
                     protein"
                     /protein_id="HFC3980659.1"
                     /translation="METLLLDIGGMSCGGCVKSVTRILESVKGVASVEVSLENKSATV
                     GYDPAQTAAEALIEAVEDGGYDAALK"
     gene            9748..11326
                     /locus_tag="ACFJAG_001395"
                     /pseudo
     CDS             9748..11326
                     /locus_tag="ACFJAG_001395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219202.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase regulatory domain-containing
                     protein"
     gene            11408..12505
                     /locus_tag="ACFJAG_001396"
     CDS             11408..12505
                     /locus_tag="ACFJAG_001396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein"
                     /protein_id="HFC3980660.1"
                     /translation="MNQTFTLPDTRPYPQNPIKNHLLLNAYQLAHNSSQASRKLSSGQ
                     LQTEIRGMLEQNHYINLSLALTMSPDAGTYAALLSSVNAVLDCEKEGEVQWFALPVVL
                     VSGCKKERAIEMKLPTEALFACLQNYPHLRALTQETQWLPYLVHSSDLSAVAPDEWWR
                     AKQNTEAAAQHLRRFAPRPLLLPEGQSVHVVYVLGFGSGKVQAALGQNLLQAGLPLMQ
                     VWQENLASEGITLFANPLSPDTPARALSDGSHTRQRMAMDVFAANAIRAVRMQSPRVG
                     VVAAAKAGGQILFGFNATDGAFEVVPQVFCWQLSFTDNIAVIQQNFLDLMAECRVEHV
                     YLLHNPLGEQENIPSYAEALKREGRNPFFSA"
     gene            12619..13734
                     /locus_tag="ACFJAG_001397"
     CDS             12619..13734
                     /locus_tag="ACFJAG_001397"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008887 - glycerate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0031388 - organic acid phosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HFC3980661.1"
                     /translation="MKIVIAPDSFKESLTAQQVAEAIKRGFQQSIADVECLLCPVGDG
                     GEGTVDAIRHSLDLEEKCLQVTGPFGQKEVMRYFQKEQLALFEVADLVGLGKIPLEKR
                     NPLQIQTRGIGELIRHLISQEIKEIYIGVGGTAGNDGGIGIAAGLGYQFYDEDGNALP
                     ACGQSLLNPASVSTENRYEIPEDVHIRILADVVSPLCGHQGATYTFGKQKGLDSTMFE
                     AVDQAIQDFYEKVPPATLKLKGAGAGGGIAGGLCAFAQASIVSGIDTCLDLIDFDKKV
                     SDVDLVIVGKGRLDRQSLAGKAPIGVAKRTPVGVPVVAICGSFAEDLPSLPFENIQAA
                     FSILEKSEPLEDSLKNASLYLEHTASNIGYLLNMPKI"
     gene            13802..14314
                     /locus_tag="ACFJAG_001398"
     CDS             13802..14314
                     /locus_tag="ACFJAG_001398"
                     /EC_number="3.1.3.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004725 - protein tyrosine phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight
                     protein-tyrosine-phosphatase"
                     /protein_id="HFC3980662.1"
                     /translation="MPSERVSASDGIALEQGWDMKKPKILFVCLGNICRSPMAEYILR
                     RRAAEAGIPLETDSAGTSGWHDGEDMHRETAKILKKYGIDASGFTSRKIRQSDATAFD
                     YIIAMDGKNLSELEKTFGRRPEKIFKLTDLIPESGYDHVPDPWYMGDFEETYRLADAG
                     CRALLEKISK"
     gene            14391..14867
                     /locus_tag="ACFJAG_001399"
     CDS             14391..14867
                     /locus_tag="ACFJAG_001399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fur family transcriptional regulator"
                     /protein_id="HFC3980663.1"
                     /translation="MKTNFKQKIIEQARREDLQVTALREQVLDIVLQQSGVIKAYNVL
                     SQMQQQSEGVLAPPTAYRALDFWADQGVLHKVAAVNGYILCSHAQHECNDHCHDHEEA
                     EAHHSAFILVCTECGAADEQTLSHEWAALRAGVAESGFALKEEHVVLTGICKKCQK"
     gene            14855..15781
                     /locus_tag="ACFJAG_001400"
     CDS             14855..15781
                     /locus_tag="ACFJAG_001400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HFC3980664.1"
                     /translation="MSEVKKTKVHLISGFLGTGKTTALKSLMAQKDPNEKWVIIVNEF
                     GEIGIDGAVLSDNGIPVAEIAGGCLCCTAGPQMGVTVQKMLRDAKPDRLMIEASGLAH
                     AASVIDELKAKPLDGLLEIGAVFTVVDPRQFINPDYAQQALYKDQIGICDVLAASKTD
                     LCTPEQLAEFHDKAAKLFPPKAKVVEVQNAQLDIQWLDIPVVEKSRYRLKALPDNTMG
                     FQSQGFTFPAGRDFDGEKLTNFFNDLPKMTEGLVRAKGVFQVLGTWVWLNWVDGQWGA
                     NQVSWRRDSRFELIAKSFDADLIEQKLKDALE"
     gene            15846..16403
                     /locus_tag="ACFJAG_001401"
     CDS             15846..16403
                     /locus_tag="ACFJAG_001401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HFC3980665.1"
                     /translation="MKPKFKTVLTALLLAVSLPSMAATRVLMETDMGNIRLVLDESKA
                     SKTVANFVRYARKGFYDNTIFHRVIGGFVIQGGGLTEDLVQKATDKAVANESGNGLKN
                     TVGTIAMARTADPDSAAAQFFINLADNGSLDYKNGQYGYTVFGRVESGMDTVSKIARV
                     KTATRGLYQNVPVQPVKIRRVVVGQ"
BASE COUNT         3877 a         4170 c         4660 g         3806 t
ORIGIN      
        1 tttcggccgg tttgtgcatt tcgtcatccg gaagccggta ttttgccggc aggttttgac
       61 tactttgccc gatgaccggg tttgtctgtt tttaacaaag gagtgagaag gtttgtccct
      121 gtctgaattt atagaacgcc gaacgtcatt taatccgatg gttattttga cgactttgtt
      181 ttttgtgtgt gttttggtgg tattggtttt aaccgtgccg gatcaggtgc agatgtggct
      241 cgaccgggca aaagaagtca tttttaccga gttcagctgg ttttatgttt taacgttttc
      301 catttttctg ggttttctgc tgatactctc ggtcagcggt ttgggaaaca tcaggctagg
      361 acgggatgaa gatgtgccgg aattcggctt cctgtcgtgg ctggcgatgc tgtttgcggc
      421 cgggatgggc gtgggcctga tgtttttcgg cgtggcagag ccgttgatgc attatttttc
      481 ggacattacg gtcggcgcgc cggaacacag gcagcagcag gcattgctgc acacggtgtt
      541 ccattggggc gttcacgcct ggtcggtgta cggtacgatt gcattggctt tggcttattt
      601 cggtttccgc tacaaactgc cgcttgccct gcgttcttgt ttttaccccc tgttgaaaga
      661 aaaaatttcc ggaaggttcg gcgatgccat tgatattatg gcgttgcttg ctactttttt
      721 cggcatcatc accacattgg ggttcggggc ttcgcaactg ggcgccggat tgcaggaaat
      781 gggctggatt gccgaaaaca gcttcggcgt gcaggtcttg attatcgccg ccgtaatgtc
      841 cctcgccgtc gtttcggcaa tatccggcgt ggggaagggc gtgaaggtgt tgagcgagtt
      901 gaacctgggc cttgcgtttt tgctgctgtt ttttgttttg gcggcgggcc ccactgttta
      961 cctgttgtcg gcattcggcg acaacatagg gaactacctc ggaaatctgg tgcgcctcag
     1021 tttgaaaact tatgcgtacg aacgggaaca caagccgtgg tttgaatctt ggacggtgct
     1081 ttattgggcg tggtggtgtt cttgggcgcc gtttgtgggt ttgtttatcg cgcgcatttc
     1141 aaaggggcgc accatccgcg agtttgtctt cggggttttg ctcatccccg gcctgttcgg
     1201 cgttttgtgg tttaccgtct tcggcaatac ggcgatttgg ctgaatgacg gggttgcggg
     1261 gggaatgctc gaaaagatga cctcctctcc ggaaacgctg ctttttaaat tctttaatta
     1321 cctccccctg cccgaactga cgagcatcgt cagcctgctg gtcatttccc tgttttttgt
     1381 aacttctgcc gactccggga tttatgtcct gaacaatatt acctctcggg acaaaggctt
     1441 gagcgcgcca cggtggcagg cggttatgtg gggcgtgctg atgtctgccg ttgccgtttt
     1501 gctgatgcgc tcgggcggac tcggcaacct gcagtctatg accctgattg tttccctgcc
     1561 gtttgccctg ctgatgctga taatgtgttt cagcctgtgg aaaggcttga gtgcggataa
     1621 gaaatatttt gagacccggg tcaaccctac cagtgtattt tggacgggcg gcaagtggaa
     1681 agaacggctg gtgcggataa tgagccagac gcaggagcag gatattttaa aattcctcaa
     1741 acataccgca tcgcccgcta tgcacgagtt gcaacgggag ctttcggaag aatacggctt
     1801 gagcgtccgg gtcgataaga tgtttcatca ggacgagccc gcaatcgagt tcgtcattcg
     1861 gaaagagacg atgcgcgatt ttatgtacgg gattaagtct gtcgggcagg atgtatccga
     1921 ccagttgatt aacgacggca agctgccgca tatccggcac cagacaactt acaaacccta
     1981 cgcttatttt ttcgacgggc gcgtcgggta cgatgtgcag tatatgaaca aggacgagct
     2041 gattgccgac attttgaaaa actacgaacg ttatttgatg ttgttggatg atgtcggtca
     2101 ggaactgatg gcgcacgagc aggtggaatt ggcagagtaa gcgccttccc tccggcgttt
     2161 gccaaaaaat gcggtgaatc agattcaccg catttttttg ccggacgggg cttcggacgg
     2221 cacggcgttc atttgtttcc gtcaaactgc tccttcagca cccgtttcaa tactttgccc
     2281 gtagcgttgc gcggcagccc gtctttaaag tggatctgtt tggggatttt gaaatttgcc
     2341 agcacggtac gcaggtggcg gcggatttcg tcctcgccca aatccatacc ttccttcaat
     2401 tggacgaagg cgacgatttc ctcgtcggca taacggtctt tcacgccgat gacggcggcg
     2461 gcttcgacgg catcgagttt gtagatttct tcttcaatct cgcgcggata gacattttga
     2521 cctttggaaa taatcaaatc ttttttgcgg tcgacgataa agataaagcc gtcctcgtct
     2581 atggtaacga aatcgcccgt tttcaaccag ccgttgacga tggtttcatc ggtggcggca
     2641 ggcatattga ggtagccccg catcaccgaa ccgcccctga cgatcagttc gcccacttcg
     2701 ccgcgcggca cttcgaccaa ttcttcatcg acggctttgg cttccaaacc gggcaggggg
     2761 atgccgacgc tgcgggcttt ttgccgttcg ggcgtattga cggcgacgac gggcgaggct
     2821 tcgctcagtc cgtagccttc cagcaatttg gcgcggggga acttggcttt aaaatcgagg
     2881 atggtttgtt ccgccaaagg cgcgccgccg ctgataaaca ggcggatgcg gttgaaccat
     2941 ctgaaatacc aagggatttt cgccttgctc atcgcggtgt aaatcgcggg tacgcccaaa
     3001 aacacggttg cgcgtttgag cagggcctgt ttcaaaacgt tggaaaaggg gaaaacggat
     3061 ttgaccaaaa taatcgaaca cgccatataa atcggcagca gtaccatagc cgtcagcgtg
     3121 aagctgtgga acatcggcag gaaaacgata aagcggtcgc gtttggaaat tttaaagatg
     3181 cgttcgatgc cgttcaggtt ggcgaacagg ttggcgtaac tgattagcgc gcctttggga
     3241 tgccccgtcg tgccggaggt gtagatgatg tgtgccaaat catttatccg gggttggcgg
     3301 tccaagtcgg gtttttcggg gaagcggcgc acgttttcaa aaaaggcatc gccttccgcc
     3361 gtttcgccgg ccggccggct tttgtccgtc caaatgattt tttcgacggg cgtttgcgcc
     3421 ttcaggcccg ccaattcttt tgacaggccg gccgaggcga acaggaagcg cgccttgcag
     3481 tcattcagga tatacgcgta ttcgctgttt ttcaaaaatg tgttcatcgg tacggcgacc
     3541 gcgccgatgg cggagacggc gaaataggcg gtaataaatt ctgtggaatt ggaaaccgcc
     3601 agcgcgaccg tgtcgccgaa cttcacgccg atattttgca gatacgccgc gacggcttcg
     3661 gcttcctgct tgagcgcgcg gtaggcggtt ttttccttgc cgtcgaacac tgccgtgccg
     3721 ttgccgtttt tgcggcaggc ggcggcgagc atttcgtaga aattggcata agtccggttc
     3781 atgaaacttc ctttatggtt gcggacggcg aacgccctca tttgaaaaca atatgccgtc
     3841 tgaaaacgga aggcggcagt ttatcatctt tgccttcaga cggcatatca aacgccgcct
     3901 ttgcgccgca tgccggaggt tcgcccccgt ccttcctatg tctgacctga atgccgtctg
     3961 aatcaatatg aagatatacg tttcagacgg catccccctg ttgtggaaat accgtccgcc
     4021 ccccctgtcc gattattgcc tgattgcggc ggcgcggacg agttcttcga ggctgtcggc
     4081 aagcatttcc gccgcgcgcc ggtagccttg ggcggagaag tgtacgccgt ctttggcggc
     4141 ccatccttgg ttgagccagt ttttcatgct gcatatgccg cccattgcgt tttgccaaga
     4201 ccaaaacatc gtctgcccct gacgggcgac gcgccgctgc atctgttgga cttcggtcag
     4261 gaggacgggg cgcgtgccgc atacgccgag cgtgtttttc agggattcgg gcgcgccgat
     4321 gatgaggatg ccggcggcgg gcaggctgtc gcggatttgg cggacggtat ccagccattt
     4381 ttgttcggta tcggcaatgt cgatgttgtt gttgaaggct tcgttggtgc cgtaggaaag
     4441 gataaccaaa tcggcgccgg tttgggcaag gtcgttcata cggtcggcac gccatttcga
     4501 ccactgggtc aattgtgcgc cgttgatgcc catcgcggaa acggtaatgc cgccggcggg
     4561 attttcgatg ttgatgaagc cgatgtccca cggcatttcg gtctgtatgg ccaggggcag
     4621 tgccgcgccc gtatccagta cctgccagcc gccgccgttg gcggagacgg tgttgccgtt
     4681 gacggtcagg gtttgttcgg cgagcagcgg tttggcaaac agggaaacgc gctgtttgcc
     4741 ggttttgccg tcagacgcgg tcagggtcat gccgccgccg ctgccggttt gggcgaggat
     4801 gccgccgagc gggaaatctc cggtattgtt cctgctggtg aagctttgcc agttgccgct
     4861 gtgacggacg gccgccatgc gctgcccttt gacattggcg gggtaaaccc agcctatgcc
     4921 gccgtcgccc catgtttttt gcaggcgttt gcgcagggcg tcggtaaaga agtcgccggc
     4981 ggtatgcgag tcgccgattt gcaggatgcg gaaggtctcg ccgctgcctt gtgcgacgga
     5041 tcggagtttt ttcatccaag gcgaggcggc ggcgttgccg tagtcggtca gcagcccgtt
     5101 tgtatcggtg tagggggcgg acggggaaac ggtaacggtg tcggggctga cggaggcgac
     5161 gggcagggct tctgcctgcg tggcggcgaa cagggcggaa aatgcgatga agtgtttggg
     5221 gttcatggct gtgtacttga tggttgcgta ctcggttcaa aaacgatttt ttccattatt
     5281 ttttccgcca gcagtttttg tccttcggcg gtaaagtgta tgccgtcctt actgcggtag
     5341 cggacgggtt tgccgttgac gttgacggaa tcggtgtagc ggcctttccc gccgctcagt
     5401 gtttgcgcgg tgggaatcag gatgattttg cctttcaagt gttccgaaag cagtttgtcg
     5461 aggtagcgca tctgaccgtc gagcttgact tttttcatgt aggggatgcc gagccagacg
     5521 acttggacgc ggtgcgtgtg tgcggcttca aggatgcggt cgacgcgttt caggtattct
     5581 tgcgcccatt cgtcggaagc gaatttgagg tagcgtttgc cgacggggaa atcccacggg
     5641 tcgttcgggc cgaggaagac ggcgagtacg ctgatttcgg gatgtttttt caaggtttct
     5701 tcaatcgttt tcggccagtc gaagaatgag ggataggaaa gccccgtgct ttgtttgctg
     5761 aggttggcgg attcgatgcc gtattgctgt ttcaggcttt tttgcacgaa gggcgcaacg
     5821 ccctgcatca gcgaatctcc ggcgaaaaag actttgtcgc cgctgcggac ggcggcggct
     5881 tcggtgcctt gtttccattc tgttccgccg gccggcgggg cggcttcgga tgcggcggct
     5941 tcaggcggca tatctgccga accgccgtct tgagccgtcg gcggcgtttc gccggacagg
     6001 aaggttttga tgccgtctga aagggcgtag gcgttttctt gcaacgccgc tccgctccgc
     6061 caccatccgt aggcggcaag cggttcgagc gggctgttgc ggtggtaggt ctgctgccag
     6121 taggcgttga tggggttttg gctgaaccac acggcaatca gggcagacat cagtatggag
     6181 gcgaaaaggg aaagaaagtt tttcatgtcc aaacccttaa aaattggcat aaataaagcc
     6241 gggtatcccc gaaggggcga ggacgataat cagcagcagg atgatggaaa tctggataaa
     6301 ccacagccac atcgggattt tttccaaacc tttgaccgtg ccgtcgaaag cgcgttgcag
     6361 gtaagggtag agcagcatca aggatgcaaa cgaggcaagc agcagcatat ccgcccgttg
     6421 cggcgcgttc cagccgccgg cattggcaaa gagggcactg aaaactgcgc ctgcatcgtc
     6481 ggggtttgcg gtattgaaga cgagaaagct aaggcagacg aaatggaagg taacaaacca
     6541 cgagagcggc gcaaggtatt tcagacggca tagcgcgtcg cgtccgaaat accggtcgcc
     6601 cgtgttgagc agcgccagtg ccgtgccgtg cagcgcgccc caaatgagga agttccagcc
     6661 gtagccgtgc cagatgcctg agagtaccat tgccgccatc aggttgagct gtgtccgcaa
     6721 aaagcctttt ttgctgccgc ccaaggggat gtagatgtag tcgcgtatcc aggtggaaag
     6781 gctgatgtgc catttgtccc aaaatgcgcg gatattcgcg gcacgaagcg gtgcggagaa
     6841 gtttttgggc agccggaagc ccagcagcat cgccataccg ataaccaaat cggaatatcc
     6901 ggaaaagtct aaaaagagtt ggaaggtata gccgtacacg cctgccaaca cgccccagcc
     6961 gtcgaattgg gcgggatttt caaatacggg cgacacccag ttttccgcca gtatccccgc
     7021 cagccaccat tttttggcaa tgcccagtaa aatcagggaa acggcgaggg cggggcggac
     7081 gggcgaacgc ggtcggcggg tgcggatttg cgccagtgca cccgcctgtt cgccgtccgt
     7141 gcttttgaat gcggcggcgc ggataatcgg gccggaggta acggtgggga aaaaactcag
     7201 gtgcagcagc agctcgtgcc acccaaaacg cgcggcgtgc ggggcgcgga agcagtaaac
     7261 cagataggcg acagactgga aggtataata ggaaagcccc agcggcatca ggatgtcgat
     7321 tgcgccgcct tttccggcat attgtgcaat cagcggacgg aaaaaatcga aatatttgaa
     7381 aaagcccaaa acggtaatcg aggcggcaat gccgcacccc agccaaaagc ggcgcgtact
     7441 ttcgcgatcg gaacggagca gttcgcccaa aaggtacacg caggaggaat aaaggacgat
     7501 gattgccgca aatacggggc taatatggta gagccagccc ataccggcag ccaaaagcag
     7561 caggttttgg acggacgggt atttcgcaaa gccccagtaa atcggcagga agacgataaa
     7621 aaacagtgcg aactcgacag acagcagcgg cataaaccat ccttgggaca aaaaataggc
     7681 gttaaaacac ggcaaagccc gttattttaa gcaggggcgg atattccttc aatcaaaatg
     7741 ccgtctgaag ggcgggaggg gcttcagacg gcatcgctcg gtcaggttcg gatatggtgg
     7801 ttcaaattca ggcagacccg caaacctgcc gccgccgtca gcatacccgc aacgccgatg
     7861 caggaaatgc ccgagtattg cgtaacctaa tgtcccagca gtgcgccgcc gcctataccg
     7921 acgttgtaaa gccccgaata aatcgagttg gcaaggtctg cggcatcgga ggcgaaatcc
     7981 aaaactttgg caaccatccc caagctgacg accacaatcg ccgtccccca tacgaacacc
     8041 aacgcgtaaa tggcggcagg aaaatgcgcc aaaggcagca aaagccccga agagagggcg
     8101 ataagcgaca ccgcgcccgc caaaaatgcg cgcggatgtt tggcaaacca tttgccgaac
     8161 aggtaagacg cggcaaaacc cgccaggccg tacagccccg gaaccaccgt aacctgccgc
     8221 gcggagaaac cgccgatttg gatgacgaag ggctcgatgt agctgtatgc ggtaaagtgc
     8281 gccgtaatca ccggcaccgt taccgcatac agcagcatca gttttttccg tttcaaaagc
     8341 aggggcaggc tgcttaaaga accggtattc acgctcggca ggcgcggcag gcttttggca
     8401 agcactgcca ttaccgccgc cgaacacagg ccgatcagca gaaaactcgc ctgccagccc
     8461 aaatattgtc cgaccatacg cccgagcgga atccccgcca ccatcgccat caccgtcccc
     8521 gtgctgagca gccccaatgc ctgattccct tttccgacag gggcgatgcg taccgccagc
     8581 gaagccgtaa tggaccagaa caccgcgtgc gtcagcacaa tccccacgcg gcttgcgagt
     8641 aggatttcaa aacgccacga ggcaaacgac aggatgtggc tgacagtaat acagcgcaaa
     8701 caggaccagc agcaggccgc gccgttccat aattgcgcgt cagcagcatc agcggcagcg
     8761 gcagcgaagt cagcgcgaca atccacgcat aaaccgtaat catcacaccc gtttcggtcg
     8821 ccgccatgcc gaagcttcgt ccgatgtcgc tcaaaagcgc gatggggatg tattcggccg
     8881 tgttgaaaat aaatgcgccg attgccaagg caacgatgct caaccaaggt ttgtgcgaag
     8941 cgttcatctc aattccttat atgtcgcacc ccgccaaaag ggggcgcatt atggtgaatt
     9001 aacaaaaacc ggtacggcgt tgccccgcct tagctcaaag ggaacgattc cctaaggtgc
     9061 tgaagcacca ggcgaaccgg ttccgtacca tttgtactgc ctgcggcccg ccgccttgtc
     9121 ctgatttttg ttaattcact atacttttct tgtctgccgg acggcaaaat ccaaatcagg
     9181 gggaagcagc cgcctcccgt tcggagaaac actcgggacg ctgctttgaa aatcgttcca
     9241 tatgttgaaa cattgccgcc tcccgattgg gcaaggttgc cattatgtcg caagcatccg
     9301 tgccgcaccg tttccgcgtt tgcccaagtt cacgctccga cttacaataa cgcccgtcag
     9361 attgcagtac caacgaaagg aaaaatcgtg gaaaccctcc tcctcgacat cggcggcatg
     9421 agctgcggcg gctgcgtcaa aagcgttacc cggatattag aaagcgtaaa aggcgtggca
     9481 agcgtcgaag tcagccttga aaacaaaagt gcgaccgtcg gatacgaccc cgcgcaaacc
     9541 gcagcggaag cactaatcga agccgtagaa gacggcggct atgatgcggc gttgaaataa
     9601 agcggcaaaa atgccgtctg aagcctttgc gtttccccga tgccgtctga agcacgctcc
     9661 gcgccttcag atggcatttg atttagttga acgggcagga tgaattggtt aaacttgcgg
     9721 gcaatagtgc cttcagacaa acaaaatatg ccgaacaaaa agaaaaaagc cgcctttgcg
     9781 cgctgcaacg gagaacggtg tgccgggcgt gtccgacatc aaaaattcat atgatgattt
     9841 gatgtacgaa tccaaagcat tttcccaaac cgccatcaac gccttggagg catgcgcccg
     9901 catgatgggt ttgaagccta cggcagccgc aaaagccaag gtcttggagc tgggctgttc
     9961 gatgggcaga aacatcatca cgcaggcact ttattacccg gatgcggaat ttgtcggtat
    10021 cgacttgtcc ggcaggcagg ttgcgcaggg caacgccatc attgaaaaaa tgggcttgga
    10081 aaatgtgcgt ctggaagaaa aagatatttt gaccgtcgat gaatcattcg ggaagttcga
    10141 ctatatcatc gtccacggca tttggtcgcg ggtgcccgac gcagttaaag acaaaatctt
    10201 ttcgatttgc cggaacaacc tgaccgaata cggcattgcc tatatttcat acaatgttta
    10261 ccccggttgg aagcggcagg agcagttgcg cgatattatg cagtttgccg gcagggatgc
    10321 gcttggagaa cccttggaag caaggacgcg gaaaggcttg gatgcgatca aggcgctggc
    10381 ggaaattttg gaaaacgaca agggcttggg cggcggcaaa cttccggcga ttcaaaaaat
    10441 attgaatcac aatacttatt atgtcgcaca cgaatatatg gaaatattca acgacccgat
    10501 ttacgttaac ggtttcattg aatgggcaaa ccgccaccgg ctggcgtata tcggggatac
    10561 cgatttgcat gtgtcttttg tttcttggat ggcggagcat acgcgggagc ggattctggc
    10621 attggcaggg ggtgattata ttgccaaaga attttacagc gatattttat ccgaccgcca
    10681 attccaccgt tcgcttttat gccgtgagga agtcggggat actgtcaggc gtgatgagtc
    10741 ggttgccgtc gaagtgatag aaagtttgaa tttccgcccg gcaagagggg aaacaatcaa
    10801 ctttgatgaa aacgataccc tgctttcggg catacgcgat gtgatgaaaa ccggagaggc
    10861 gtttaaaacg gaagatgttg cggaaaatct tgcccgccga tttcccggtc tggaatttga
    10921 ccgcatgaaa atcaattccc agcttttatt gcaaaccatt ctcgggcgtt tttctgtttc
    10981 atcagacaat gcgggcaaac cattttttga agaccataaa acctatgtgc cggcgcgctt
    11041 tacaaactat gccgccgcct ttgtggaaca cggtgcggga gcgtttgtcc ggcctgccaa
    11101 ccgttacaac gaaagcacgc cctcattcgg atacgggcat ttgtacatta tgcggcaatt
    11161 gtcgcggccg acgagcaaac aggcattgat tgaaacggtt gccgaaaact tgaacatcgt
    11221 cagcgccacg cccgacggtt tgacattcca tccgcctgcc gaagtgtatg tggaagaaat
    11281 attggcagac ttggcagaca ggcattttct cgtttcggcg gattgacggg caagtcccga
    11341 cggcaatccg tccgatatat tttcagacag gaaagacaca cactgcgaaa aacggtacac
    11401 gacacatatg aaccagacat ttaccttgcc cgatacgcgc ccgtatcccc aaaatccgat
    11461 taaaaaccac ctgctgctca atgcctacca gttggcgcac aattcgtcac aggcttcgcg
    11521 caaactctcg tccgggcagc ttcaaaccga aatcaggggg atgcttgagc aaaaccacta
    11581 tatcaacctt tccctcgcgc tgacgatgtc gcccgatgcc ggaacttatg ccgcgctgct
    11641 ttccagtgtg aacgcggtac tcgattgcga gaaagaaggc gaagtgcagt ggttcgccct
    11701 gccggtcgtg ctggtgtcag gctgcaagaa agaacgggca atcgagatga agctgccgac
    11761 ggaggcattg tttgcctgcc tgcaaaacta tccgcacctg cgcgcgttga cgcaagagac
    11821 acaatggctg ccttatcttg tgcattcttc cgatttgagt gcggtcgcgc cggatgagtg
    11881 gtggcgtgcc aaacaaaata ccgaagcggc ggcgcaacac ttacgccgtt tcgccccgcg
    11941 ccctttgctg ttgcccgaag ggcagtccgt ccacgtcgtt tacgtgctgg gtttcggcag
    12001 cggcaaagtt caggcggcat tggggcagaa ccttcttcag gcaggcttgc ccttaatgca
    12061 ggtatggcag gaaaatcttg catcggaagg cattacgctg tttgccaatc cgctttcccc
    12121 cgataccccg gcgcgcgcgc tttcagacgg cagccacacg cgccaacgta tggcgatgga
    12181 tgtttttgcg gcaaacgcga tacgcgccgt ccggatgcag agtccgcgcg tcggcgtggt
    12241 cgctgcggca aaggcgggcg gacagattct attcggattt aatgcgaccg acggcgcgtt
    12301 tgaagtcgtg ccgcaggtgt tttgctggca gctttccttt accgataaca ttgccgtcat
    12361 ccagcagaat ttcctcgacc tgatggcaga atgccgtgta gaacacgttt acctgctgca
    12421 caatcccttg ggcgaacagg aaaacatccc gagctatgcg gaagcgttga aacgggaagg
    12481 gcgcaatccg tttttcagcg catagtgatt tgtagtagtg ataggctttc tcatttctat
    12541 aataaatcaa aataaagagc acaacacttt ttcattctgt gttgtgcctt gagtgaaacg
    12601 aaaggatgaa ttataaatat gaagattgta attgcaccgg attcgtttaa ggaaagcttg
    12661 acagctcaac aggtagctga agcaataaaa agaggcttcc aacaatcgat agcagatgtg
    12721 gaatgtctcc tctgtcctgt cggtgatggg ggagaaggca ctgtagatgc tatccgacat
    12781 tctcttgacc tagaagaaaa atgtctccaa gtgacaggac cttttggaca aaaagaagtc
    12841 atgcgctatt ttcaaaaaga acaactagcc ctattcgaag ttgctgattt ggttggtctt
    12901 ggaaaaatcc cgctagagaa acgaaatcca ttacaaatcc aaactcgtgg tattggagaa
    12961 ttgattcgcc acctcattag tcaagaaatt aaagaaatct atattggcgt tggcggtacg
    13021 gccggtaatg atggaggtat tgggattgct gctggtttag gttatcaatt ttatgatgag
    13081 gatggaaatg ccttacccgc ttgcggtcaa tccttactaa acccagcttc tgtttcaaca
    13141 gaaaatcgct atgaaattcc tgaagatgtt cacattcgta ttttagcaga tgttgtgagt
    13201 cccttatgtg gacaccaagg tgcgacctat acgtttggca agcaaaaagg gctggattct
    13261 actatgtttg aggccgtaga tcaggcaata caagattttt atgaaaaagt cccccctgca
    13321 acattaaaac ttaaaggagc aggagctggt ggaggcatcg ctggtggttt gtgtgccttt
    13381 gctcaggcaa gtatcgtatc tggaattgac acctgcctgg acttgattga ctttgataag
    13441 aaagtgtcag atgttgactt ggttatcgtt ggtaaaggaa gactagatcg tcaaagttta
    13501 gcagggaaag cgcctattgg tgtagcaaaa agaacccctg tcggagttcc tgttgtcgct
    13561 atttgcggca gtttcgctga agatttgcct tccctaccat ttgaaaatat ccaagctgcc
    13621 ttttctattt tggagaaaag tgaaccttta gaagatagtt tgaaaaatgc cagtctttat
    13681 ttggagcata cggcttctaa tattggatat ttattaaata tgcctaagat ttagccaagc
    13741 catttcttcc agatggatgt tttggcaggt tcttccttat gcggttacga ttaaccggcc
    13801 gatgccgtct gaaagggttt ccgcttcaga cggcatcgcg ttggaacagg gatgggatat
    13861 gaaaaaaccg aaaatccttt ttgtctgcct cggcaacatc tgccgttcgc cgatggcgga
    13921 atacattttg cgccgccgtg ccgccgaagc gggcattccc ctcgaaacgg acagcgcagg
    13981 gacatcgggc tggcacgacg gcgaggatat gcaccgtgaa acggcaaaga tattgaaaaa
    14041 atacggcatt gacgcttcag gctttaccag ccgcaaaatc cgccaaagcg atgcgacggc
    14101 gtttgactac atcatcgcta tggacggcaa gaatttgtcc gaattggaaa aaactttcgg
    14161 caggcggccg gaaaaaatat tcaagctgac cgacctgata cccgaaagcg gttacgacca
    14221 tgtccccgat ccgtggtaca tgggtgattt tgaagaaaca tacaggcttg cggatgcagg
    14281 ctgtcgggca ttattggaaa agatttccaa ataaagcaat tgaatacaaa cacaaatata
    14341 aaaccgcctc ctgtcgtatc ggtcgttcgg acggcataaa cagggaattt atgaaaacaa
    14401 atttcaaaca gaaaattatc gaacaggcac gcagagagga cttgcaggta accgctttgc
    14461 gcgagcaggt attagatatt gtcttgcagc aaagcggcgt gattaaagcc tacaatgttt
    14521 tgtcacagat gcagcagcag agcgaaggcg tgcttgcacc gcctaccgcc taccgtgccc
    14581 ttgatttttg ggcggatcag ggcgttttgc acaaagtggc ggcggtcaac ggctatattt
    14641 tgtgcagcca cgcgcagcac gagtgcaacg accattgcca cgaccacgaa gaagccgaag
    14701 cgcaccacag cgcgtttatt ttggtctgca ccgaatgcgg cgcggcggac gagcaaaccc
    14761 tcagccacga gtgggcggca ctgcgtgcag gcgttgccga aagcggtttt gcgctgaaag
    14821 aagaacacgt tgttttaact ggaatctgta aaaaatgtca gaagtgaaaa aaaccaaagt
    14881 ccacctgatt tcaggttttc tgggaacagg caaaaccacc gcgctcaaaa gcctgatggc
    14941 gcaaaaagac ccgaacgaaa aatgggtcat catcgtcaac gagttcggcg aaatcggcat
    15001 tgacggcgcg gtattgagcg acaacggcat ccctgtggca gaaatcgccg gcggctgttt
    15061 atgctgcacc gccggcccgc aaatgggcgt aaccgtgcag aaaatgctgc gcgacgccaa
    15121 acccgaccgc ctgatgattg aggcaagcgg actggcgcac gccgccagcg tcatcgacga
    15181 attgaaagcc aaacctctgg acggtctttt ggaaatcggc gccgtcttta ccgtcgtcga
    15241 tccgcgccag ttcatcaatc ccgattacgc gcaacaggcg ttgtataaag accaaatcgg
    15301 catttgcgac gtattggccg ccagcaaaac cgatttatgc acccccgaac agcttgccga
    15361 atttcatgac aaagcggcaa aactgttccc acccaaagcc aaagtggtcg aagtccaaaa
    15421 cgcacaactc gatatccaat ggctcgatat tcccgtagtt gaaaaatcac gctaccgcct
    15481 caaagccctg ccggacaaca ccatgggctt ccagtcgcaa ggtttcacat tccccgccgg
    15541 acgcgatttc gacggcgaaa aattgaccaa cttcttcaat gatttgccca aaatgaccga
    15601 aggactcgtc cgcgccaaag gcgtgttcca agtattggga acgtgggtgt ggctcaactg
    15661 ggtggacggg cagtggggcg cgaaccaagt gtcttggcgg cgcgattcgc gtttcgagct
    15721 gattgccaaa tcgtttgacg cggatttaat cgaacaaaaa cttaaagacg cattggaata
    15781 gcgttcacgc gctttcagac ggcatatgaa atgaaaatgc cgtctgaagg ctttaggagg
    15841 acgggatgaa acccaaattc aaaaccgttt taaccgcgct gcttttggcg gtttccctgc
    15901 cgtctatggc ggcaacccgc gtcctgatgg aaaccgatat gggcaatatc cgtttggttt
    15961 tggacgaatc caaagcctcc aaaaccgttg ccaatttcgt gcgctatgcc cgaaaaggct
    16021 tttacgacaa cacgattttc caccgcgtca tcggcggctt cgtcatccaa ggcggcggat
    16081 tgaccgagga cttggtgcaa aaggcaaccg ataaggccgt tgccaacgaa tccggcaacg
    16141 gcttgaaaaa caccgtcggc accatcgcaa tggcgcggac ggcagacccc gattccgccg
    16201 ccgcccaatt ctttatcaat ctggcggaca acggttcgct cgactacaaa aacggacaat
    16261 acggctacac cgttttcggc agggtagaaa gcggaatgga caccgtttcc aaaatcgccc
    16321 gcgtcaaaac cgccacgcgc ggcctttatc aaaacgtacc cgtacagccc gtcaaaatcc
    16381 gtcgcgttgt tgtcgggcag taacacgcag acagacgttc agacggcgtc gcccgtttcc
    16441 caaaaaacgc cgtttaaagt aaaaaaatat tttaaaacag acagttgata ttgacaaatt
    16501 caaaccgagg att
//
LOCUS       DAXFZM010000055        16283 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.055, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000055 DAXFZM010000000
VERSION     DAXFZM010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16283)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16283)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16283
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.055"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(264..1049)
                     /locus_tag="ACFJAG_001402"
     CDS             complement(264..1049)
                     /locus_tag="ACFJAG_001402"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008934 - inositol monophosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006020 - inositol metabolic process
                     [Evidence IEA];
                     GO_process: GO:0046855 - obsolete inositol phosphate
                     dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HFC3980666.1"
                     /translation="MNPFLNTAFKAARRAGQMMIRAAGNLDAVKTDSKAFNDFVSDVD
                     RNSEIILVEALKEAYPHHKITCEESGFHGKATAEYEWIIDPLDGTTNFLHGHPQYAIS
                     MALLHKGVLQEALVYSPERNDVYMASRGKGALLNDRRIRVSNRIELNRCLIGTGFPVV
                     DQSMMDKYLAILKDFLAKTAGGRREGAASLDLCAVATGRFDGFFEFNLKPWDIAAGAL
                     IVQEAGGIVTDMSGEDAWLESGDIVAANPKVLAQMLKIISAHV"
     gene            1293..2108
                     /locus_tag="ACFJAG_001403"
     CDS             1293..2108
                     /locus_tag="ACFJAG_001403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HFC3980667.1"
                     /translation="MTALKPALPDYLGNIRIILTRTSHPANIGSAARAMKTMGLHRLT
                     IVTPNLMATPMTENPPVFNPDDVQSFALPEESFILASGAADVLHNAEIVATLDEALAD
                     TTIACALTSRRREITAPLQTPRDLVSELLQAANRGEKVALVFGNETFGLSIEEVRACN
                     RLMTINGNPDYFSLNLAQAVQVVCYEIFSQTDSPMTHLQQEDHAATHEQIKGMLAHME
                     SVMDDIGFFNRRNGERLMRRMQSLFGRANTQTEDIDILRGFFNTVSHRIHKKD"
     gene            2149..3018
                     /locus_tag="ACFJAG_001404"
     CDS             2149..3018
                     /locus_tag="ACFJAG_001404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1853 family protein"
                     /protein_id="HFC3980668.1"
                     /translation="MTDIRISMNYALDALWWKLTSQPVRDLASLLTAPPLWQSGCELS
                     VRELLGERGFRYLLALDADPAPLTDYLAQRAPFDHRLGIYAEELLAFWFTNAPHTKLH
                     AYNLTVFSDGQTLGAADFVVSLNQQPYHIELACKYYGGDQVQNLRGLNPKDTLTDKAA
                     KLVQQFQLVHTSQGKATLAAQDLPENPLPASIVRGIGFFPQGFHAFEPPLNPYGWRGI
                     YIQDWAEYGFERQEARYHLLDRMVYLAPARVAETETLNATEIRRIDQGLIAVLECRPD
                     GFWHEIERIMKAV"
     gene            3054..4310
                     /locus_tag="ACFJAG_001405"
     CDS             3054..4310
                     /locus_tag="ACFJAG_001405"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RsmB/NOP family class I SAM-dependent RNA
                     methyltransferase"
                     /protein_id="HFC3980669.1"
                     /translation="MNAAQLDHTAKVLAEMLTFKQPADAVLSAYFRKHKKLGRQDRHE
                     IAETAFAALRHYQKISTALRRPHAQPRKAALAALVLGRSTNISQIKDLLDEEETEFFG
                     NLKARKTEFSDGLNTAAELPQWLVEQLQQHWSEEEILAFGRSINQAAPLDIRVNTLKG
                     KRDKVLPLLQAESPDAEATPYSPWGIRLKNKIALNKHELFLDGTLEVQGEGSQLLALL
                     VGAKRGEIIVDFCAGAGGKTLAVGAQMANKGRIYAFDIAEKRLANLKPRMTRAGLTNI
                     HPERIGSEHDTRIARLAGKADRVLVDAPCSGLGTLRRNPDLKYRQSAETVAKLLEQQH
                     SILDAASKLVKPQGCLVYATCSVLPEENELQIKRFLSEHPEFEPVNCAELLQNLKVDL
                     DTGKYLRLDSARHQTDGFFAAVLQRK"
     gene            4656..5084
                     /locus_tag="ACFJAG_001406"
     CDS             4656..5084
                     /locus_tag="ACFJAG_001406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4124 domain-containing protein"
                     /protein_id="HFC3980670.1"
                     /translation="MNFALSVITFTLASFLPVPPAGAAVFTWKDGGGNSYSDVPKQLH
                     PDQSQILNLRTLQTKPAVKPKPAVDTNADSAKENEKDIAEKNGQLEEEKKKIAETERQ
                     NKEENCRISKMNLKAVGNSNAKNKDDLIRKYNNAVNKYCR"
     gene            complement(5133..6476)
                     /locus_tag="ACFJAG_001407"
     CDS             complement(5133..6476)
                     /locus_tag="ACFJAG_001407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HFC3980671.1"
                     /translation="MFHSVNVFTGETLYRRPDQDYAEFERRLADLKMHGRAFAQLGVT
                     ERAARLQKFAGRLEAEKERFAEMVCEEVGRCLHECRAEIVKSIELIRYYARLAPELLA
                     HKTIATQASLSQVRFEPLGVVFAVMPWNYPVWQVLRFAVPAMCAGNACAVKPAPSVAR
                     VSRALFDLASDGIPLAGAWLDEADTLKAVEDTDAMAFTGSTHTGRILAAHAGANLKKT
                     VLELGGSNAFIVMPDADLERAAAEACYSRFRDAGQSCNAAKRIIVTEAAADRFIQLFL
                     AECAKLKMGDPKHPDTTLAPLHREDLRDRVHGQVEDAVSNGAVCLTGGKVPQGSGWFY
                     PATVLDRVNPACRVWREEVFGPVALILRAENEEHAICLANDSPFGLGACIYTADTERA
                     WRFAEKIQAGSVFINRHTSSDLRLPFGGVKDSGYGRELSEFGLYEFVNVKTYWQK"
     gene            complement(6481..7134)
                     /locus_tag="ACFJAG_001408"
     CDS             complement(6481..7134)
                     /locus_tag="ACFJAG_001408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HFC3980672.1"
                     /translation="MGLGMEIGKLIVAFLVLINPFSALSLYLDLTNGHSTKERRKVAR
                     TAAVAVFAVIAVFALIGGALLKVLGISVGSFQVGGGILVLLIAISMMNGNDNPAKQNL
                     GAQPETGQARPARNAGAIAVVPIAIPITIGPGGISTVIIYASAAKTYSDIALIIAAGL
                     VVSAICYAILIVAGKVSRLLGATGLTILNRIMGMMLAAVSVEIIVSGLKTIFPQLAG"
     gene            7284..7574
                     /gene="gatC"
                     /locus_tag="ACFJAG_001409"
     CDS             7284..7574
                     /gene="gatC"
                     /locus_tag="ACFJAG_001409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA];
                     GO_process: GO:0006450 - regulation of translational
                     fidelity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HFC3980673.1"
                     /translation="MALTLADVDKIARLSRLQLTAEEKEKSLQELNDIFTMVEQMQNI
                     NTDGIEPMAHPHEVALRLREDEVTETDRAAEYQAVAPEVRNRLYIVPQVIEE"
     gene            7637..9082
                     /gene="gatA"
                     /locus_tag="ACFJAG_001410"
     CDS             7637..9082
                     /gene="gatA"
                     /locus_tag="ACFJAG_001410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HFC3980674.1"
                     /translation="MTQYTLKQAGSLLQSKQISAVELASAYLAAIAEKNPALNGYITI
                     DQDKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASKMLDNFVSPYTA
                     TVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNPEHVPGGSSGGSAAVVA
                     ARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQAGPMAQTAE
                     DCAILLNAMAGFDPKDSTSFEREKEDYTRDLDKPLKGVKIGLPKEYFSEGNSTDVQTA
                     LQNTIDLLKAQGAELVEVSLPQTKLSIPAYYVLASAEAGTNLSRYDGVRYGHRAAQFG
                     DLEEMYGKTRAEGFGSEVKRRIMIGTYVLSHGYYDAYYLKAQKLRRLVADDFQTAFAR
                     CDLILAPTAPSAAPKIGADTSPVETYLSDIYTIAVNLAGLPALTLPAGFSGGGLPVGV
                     QLVGNYFAEAKILGAAHQIQLNSDWHGKRPE"
     gene            9079..10011
                     /locus_tag="ACFJAG_001411"
     CDS             9079..10011
                     /locus_tag="ACFJAG_001411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VirK/YbjX family protein"
                     /protein_id="HFC3980675.1"
                     /translation="MKQNRTFTFPDFRTVYSYAPLYRLQHLKYTLRKFFGKKEIYAFE
                     QFVNASPIRQGLFLHCPQDAYPLLREFVDRRFNCKRRLDAMTADFLMAEKLFGTDVLC
                     QMEDCRFHLVLAHLSDGISLWLNRNDNCVEEGAWSLSLRDEAGNRLYMATFAFVGTHL
                     LTASVQGPSGEEAKDTVRRITKQLHGLRPQQLMVTALQYFAAALKLDGAIGIAQKHQV
                     KLRWKLKKRVKMNYDAFWQEYGASLERDGYWHLPQTPARKDLADIESKKRSMYRKRYE
                     MLDDMVTKMKDSLKTEARGISDGIQTEKPLRRTV"
     gene            10054..11484
                     /gene="gatB"
                     /locus_tag="ACFJAG_001412"
     CDS             10054..11484
                     /gene="gatB"
                     /locus_tag="ACFJAG_001412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HFC3980676.1"
                     /translation="MTWETVIGLEIHVQLNTKSKIFSGASTAFGAEPNAHASVVECAL
                     PGVLPVMNREVVEKAIKLGLALDAKINRKNVFDRKNYFYPDLPKGYQISQLDLPIVEH
                     GKLEIVVGGDVKTINVTRAHMEEDAGKSVHEGLNGATGIDLNRAGTPLLEVVSEPEMR
                     SAAEAVAYAKALHSLVTWLDICDGNMAEGSFRIDANVSVRPKGQAEFGTRREIKNLNS
                     FRFLDQAINYEAEAQIEILEDGGTVQQATMLFDPEKGETRVMRLKEDAHDYGYFPDPD
                     LLPVIISDAQMQKAKAEMPELPKEMAARFVADYGVSEYDARLLTASRVQAAYFEEAAK
                     ESGQGKPTANWMNGELAATLNKEGMELADSPITAPRLAALVGKIADGTLSGKLAKKAF
                     EAMWAEPETSIAEIIEKHSLQQMTDTGAVEAMVDEVLANNAKAVEQFKSGNEKALNAI
                     VGQVMKTSKGKANPAQVQELIKAKLA"
     gene            11576..12586
                     /locus_tag="ACFJAG_001413"
     CDS             11576..12586
                     /locus_tag="ACFJAG_001413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HFC3980677.1"
                     /translation="MNHTVTLPDQTTFAANDGQTVLSAAARQNLNLPHSCKNGVCGQC
                     KAELASGDIQMGGHSEQALSEAEKAQGKILMCRTTAQSDISLNIPGCKADALPVRTLP
                     ARIESMVFKHDVALLKLALPKAPPFAFYAGQYIDLLLPGNVSRSYSIANSPDQESILE
                     LHIRRRENGVCSEMIFGSEPKVKEKGIVRVKGPLGSFTLQEDSGKPVILPATDTGYAP
                     IRSILLDLIRQNSSRTAHFYWGARHQDDLYALEEAQGLACRLKNTCFTPVLSRPGEGW
                     QGRKGHVQDIAAQDHPDLSEYEVFACGSPAMTEQAKNLFVQQHKLPENLFFSDAFTPS
                     AS"
     gene            complement(12716..13348)
                     /gene="pdxH"
                     /locus_tag="ACFJAG_001414"
     CDS             complement(12716..13348)
                     /gene="pdxH"
                     /locus_tag="ACFJAG_001414"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004733 - pyridoxamine phosphate oxidase
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HFC3980678.1"
                     /translation="MDLHNIREDYSKRELSEADCADNPIEQFERWLDEAVRAEVNEPT
                     AVNVAAVDGRGRPNSRMVLLKEVNSEGFVFFTNYHSRKGRSLELNPFAAMTFFWPELE
                     RQVRVEGRVGRLAEKLSDEYFESRPYQSRLGAWASAQSEVIPNKAVLVAKAAAVGLKH
                     PLHVPRPPHWGGYIVIPDLIEFWQGRPSRLHDRIQYRLLDGGWIRERLSP"
     gene            13408..13560
                     /locus_tag="ACFJAG_001415"
     CDS             13408..13560
                     /locus_tag="ACFJAG_001415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020424398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980679.1"
                     /translation="MHKLCPQSRSDDFIRKTAASGTISNRPTEDGILSTRPAAHAAEE
                     PPYQAS"
     gene            13569..14618
                     /locus_tag="ACFJAG_001416"
     CDS             13569..14618
                     /locus_tag="ACFJAG_001416"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HFC3980680.1"
                     /translation="MSKQPTSKRQWRDGAAPSAKKTAKPFKSKARPKDETRKTAAQAY
                     GQKASDGIKLQNAPKQRAAKAKKLVVRNPNQKIMEHARDLKERRSDLSRMEPERLQKV
                     LAASGVGSRREMEEWINNGWVTVNGKTAQLGDKVTPDDHVTVKGSIIKLKWADRLPRI
                     ILYYKQEGEIVSRDDPQGRVSIFDRLPQAASSRWVAIGRLDINTSGLLILTTSGELVQ
                     RFAHPSFEVEREYAVRVLGGLTTEQMRSLTEEGVMLEDGLAKVERIYEQGGEGANKWY
                     NIVIKEGRNREVRRIFESQGLTVSRLVRVAFGPIGLPNRLKRGQFYELNPAEVANILK
                     WADMLLPGERRRKKA"
     gene            complement(14677..16218)
                     /locus_tag="ACFJAG_001417"
     CDS             complement(14677..16218)
                     /locus_tag="ACFJAG_001417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OFA family MFS transporter"
                     /protein_id="HFC3980681.1"
                     /translation="MKFLDREASIAKPGFNRWLVPPAALAVHLAIGQIYAYSVFNAPL
                     TKLIGITESAAGDWKLTTVGWIFSIALAMLGASAALFGTWMERVGPRKAIFAAACCFS
                     LGFFVSAFGVRTHNLFLLYLGNGVIGGVGLGLGYIGPVSTLMKWFPDKPGMATGLAIM
                     GFGGGAMLASPLSVSLMNAFSNAASVGVAETFAVLGLFYLALMMFGAFTIRVPADGWK
                     PEGYTVPKTQNKPVSSNHVNVSQAMKTPQFWLLFWVLCLNVTAGIGVLGQASVMIQEL
                     FSETSAGRQAAVGAGAAAGFVSLLSLFNMGGRFLWSSVSDKIGRKNTYTIFFVLGSLL
                     YFAVPSIGEGGSKALFIIGFCVIISMYGGGFAAIPAYLKDLFGTYQVGAIHGRILLAW
                     STAAVIGPVLVNYIRQSQIDSGIPAAQAYSVTMYIMAGLLIVGLLCNLAVKSVHEKHH
                     EKDIKTAARSGNPDDETAISDAYLVGEKVSGDGISVWWRWALAVIPLAYGVVMVFVKA
                     LDLFS"
BASE COUNT         4145 a         4954 c         4017 g         3167 t
ORIGIN      
        1 ttttttattc cccggtgtct gttttctgcc acagccgatt tagattccag caaaccgcct
       61 ttaaacaatt gaaagaaaag ggacaaattg cacagggttc tccgtttaac cagatacgga
      121 tttccattcc cggcaatttc gggcatttga ccgtttccgc cttcctgccc cgccgccaat
      181 aaaaatgccg tctgaaatat cggcacgata cttcagacgg catacccgcc cgttttcccg
      241 catttccggg agctggctga aatttaaacg tgtgcggaaa tgatttttaa catttgcgcc
      301 agtactttgg gattggcagc cacaatatcg ccgctttcca accaagcgtc ctcacccgac
      361 atatcggtaa cgatgccgcc tgcttcttgg acaatcaatg caccggcggc aatgtcccac
      421 ggtttgaggt tgaactcgaa aaagccgtca aaacgtcctg ttgctacggc gcacaaatcc
      481 aaagaagccg cgccttcgcg gcggcctccg gcggtttttg ccaaaaagtc tttcaaaatc
      541 gccagatatt tgtccatcat gctttgatcg acaacaggga aaccggtacc gatcaggcag
      601 cggttcaatt cgatgcggtt ggagacacgg atgcggcggt cgttaagcaa cgcgccttta
      661 ccgcgcgaag ccatgtacac gtcgttacgt tcgggggagt acaccaaagc ttcctgcaac
      721 acgcctttgt gcagcagtgc catagagatg gcgtattggg gatggccgtg aaggaaattg
      781 gtcgtcccgt cgagcggatc gataatccat tcgtactcgg ctgtagcttt gccgtggaag
      841 ccgctttctt cgcaagtgat tttgtgatgc ggataggctt ctttcaaagc ctcaaccagg
      901 atgatttcgg aattgcggtc aacatcggaa acaaaatcgt tgaaggcttt gctgtcggtt
      961 ttgacggcat cgaggttacc tgcggcgcga atcatcatct gaccggcacg gcgggcggct
     1021 ttaaaggctg tattcaaaaa cggattcatc agatttcctt aagggtggca taccgccggt
     1081 tcggacgtgc agtccttcgg agcggcaaaa tcggagttta tctggttggg gcaaaccctg
     1141 ccaaatcggg taaaataccg cctgacgcgt gtctgcttca ggcgcaacgt taaatttccg
     1201 acgttgttaa agaacagttc aaacggcatt tcaccgtccg aacgaaaaag acggcgcatt
     1261 ataccctatt ccattccgac cgaaaaccga acatgactgc tctcaaaccc gccctgcccg
     1321 actacctcgg caacatccgc atcatcctca cacgcaccag ccaccccgcc aacatcggct
     1381 ctgccgcacg cgcgatgaaa acgatgggtc tgcacaggct gaccatcgtc acccccaatc
     1441 tgatggcaac gccgatgacg gaaaatccgc ccgtttttaa tcccgatgac gtgcaaagtt
     1501 ttgcactgcc tgaagaaagt ttcatcctcg cttccggcgc ggcggacgta ttgcacaacg
     1561 ccgaaatcgt cgccacactg gacgaagccc ttgccgacac caccatcgcc tgcgccctga
     1621 ccagccgccg ccgcgaaatc accgcgccgc tgcaaacccc gcgcgatttg gtgtccgaat
     1681 tactgcaggc cgccaaccgc ggcgagaaag tggcgctggt cttcggcaac gagactttcg
     1741 gcttgagcat cgaagaagtc cgagcgtgca accgactgat gaccatcaac ggcaaccccg
     1801 actatttctc gctcaacctc gcccaagccg tgcaggtcgt gtgctacgaa attttcagcc
     1861 aaaccgattc gcccatgacc catcttcaac aggaagacca cgccgcaacc cacgagcaaa
     1921 tcaaaggcat gctcgcccac atggaaagcg tgatggacga catcggcttt ttcaaccgcc
     1981 gcaacggcga gcgtctgatg cgccgtatgc agagcctatt cggacgcgcc aacacgcaaa
     2041 ccgaagacat cgacatcctg cgcggttttt tcaataccgt cagccaccgt atccataaaa
     2101 aagactgatt aaggccgtct gaaaacatta caagcttttt cagacggcat gactgatatt
     2161 cggataagca tgaattacgc cctagacgca ttatggtgga aactcaccag ccaacccgtc
     2221 cgcgacctcg cctcgctgct gactgcgccg cctttgtggc aaagcggttg cgaattgagc
     2281 gtgcgcgaac tattggggga acgcggtttc cgctaccttt tagcattgga tgccgatccc
     2341 gcgccgctga cggattacct tgcacaacgc gccccgttcg accaccgtct cggcatttat
     2401 gccgaagagc tgctggcttt ttggtttacc aacgcaccgc acaccaaact gcacgcatat
     2461 aatctgaccg ttttttcaga cggccaaact ttaggcgccg cggattttgt cgtttccctc
     2521 aaccaacagc cctatcatat cgagctggcg tgtaaatact acggcggaga ccaagtgcag
     2581 aacctgcgcg gtctcaatcc caaagacacg ctgacggaca aagccgccaa attggtgcag
     2641 caattccagc tggtgcatac gtcgcaaggc aaagcaacct tagccgcaca agacctgccg
     2701 gaaaatccac ttcctgcttc catcgtgcgc ggcatcggat tttttccaca aggtttccat
     2761 gcttttgagc cgccgcttaa tccatacggc tggcgcggca tctatattca agattgggcg
     2821 gaatacgggt ttgaacgcca agaagcgcgc tatcacctgc tcgaccgcat ggtctatctc
     2881 gcgcctgcgc gtgtcgccga aaccgaaaca ttaaacgcaa ccgaaatccg ccgcatcgac
     2941 caaggcttga ttgccgtttt ggaatgtcgg ccggacggct tttggcacga aatcgaacgt
     3001 attatgaagg ccgtctgaaa ccctttacca actttaagag aacccattac attatgaacg
     3061 ccgcacaact cgaccatacc gccaaagttt tggctgaaat gctgactttc aaacagcctg
     3121 ccgatgccgt cctctccgcc tatttccgca aacacaaaaa gctcggccgc caagaccgcc
     3181 acgaaatcgc cgaaaccgcc tttgccgcgt tgcgacacta tcaaaaaatc agtaccgccc
     3241 tgcgccgtcc gcacgcgcag ccgcgcaaag ccgcactcgc cgcgctggtt ctcggcagaa
     3301 gtaccaacat cagccaaatc aaagacctgc ttgatgaaga agaaacagag tttttcggca
     3361 atttgaaagc ccgtaaaacc gagttttcag acggtctgaa taccgccgca gaattgccgc
     3421 aatggctggt ggaacaactg cagcagcatt ggagcgaaga agaaatcctc gctttcggcc
     3481 gcagcatcaa ccaagctgcg ccgctcgaca tccgcgtcaa taccttgaaa ggcaaacgcg
     3541 acaaagtatt gccattgttg caagccgaaa gccccgatgc agaggcaacg ccttattctc
     3601 cttggggcat ccgcctgaaa aacaaaatcg cgcttaacaa acacgaactg tttttggacg
     3661 gcacgctgga agtccaaggc gaaggcagcc agctgcttgc cttattggtg ggcgcaaaac
     3721 gcggcgaaat cattgtggat ttctgtgccg gagccggcgg taaaaccttg gctgtcggcg
     3781 cccaaatggc caacaaaggc agaatctacg ccttcgacat cgccgaaaaa cgccttgcca
     3841 acctcaaacc gcgcatgacc cgcgccggac tgaccaacat ccaccccgaa cgtatcggca
     3901 gcgaacacga tacccgtatc gcacgactgg caggcaaagc cgaccgcgtg ttggtcgatg
     3961 cgccctgctc cggcttaggc actctgcgcc gcaatcccga cctcaaatac cgccaatccg
     4021 ccgagaccgt cgccaaactt ttggaacagc aacacagtat cctcgatgcc gcctccaaac
     4081 tggtgaaacc gcaaggctgt ttggtttacg ccacctgcag cgtgttgccg gaagaaaacg
     4141 aactgcaaat caaacgtttc ctgtccgaac atcccgaatt tgaacccgtc aactgcgccg
     4201 aactgctgca aaacctgaag gtcgatttgg ataccggcaa atacctgcgc ctcgattccg
     4261 cccgacacca aaccgacggc ttcttcgccg ccgtattgca acgcaaataa accggtttga
     4321 acaaaatgcc gtcagaaccc ttttcaaagc gttcggacgg catttcatca attaaaaata
     4381 tcaaaaaccg cagattcaac cgattcaaca ccaaaggcag aatcacgcgc ctcatcggat
     4441 tttatacgcg cctgcctgca attttctttt tctttgccaa aatatacggt agcataacca
     4501 tattccaatg atatttttgg gaatctgttt taccccaata tataaagcac catattaagg
     4561 cggagtgtct tccctgcttt gacccgaacc cggaaaagac accgcccgaa ccaatcccga
     4621 ttctgcccgg gcagtcagcc atcaaggaaa ccctaatgaa ctttgcttta tccgtcatca
     4681 catttaccct cgcctctttc ctgcccgtcc cgcctgccgg agccgccgtc tttacttgga
     4741 aagacggcgg cggcaacagc tattcggatg tgccgaaaca gcttcatccc gaccagagcc
     4801 aaatcctcaa cctgcggacg ctccaaacca aaccggcggt caagcccaaa cctgccgtcg
     4861 atacgaatgc ggacagtgcg aaggaaaacg aaaaggatat cgccgagaaa aacgggcagc
     4921 ttgaggaaga aaagaaaaaa attgccgaaa ccgaacggca gaacaaagaa gaaaactgcc
     4981 ggatttcaaa aatgaacctg aaggcggtgg gaaactcaaa tgcgaaaaac aaggatgatt
     5041 tgatccgtaa atacaataac gccgtaaaca aatactgccg ttaatcggct ctagcgcaaa
     5101 cccgatgccg cctgaagcgg cacggggttt gtttatttct gccagtaggt tttgacgttg
     5161 acgaactcgt acaacccgaa ttcggacagt tcgcgcccgt aaccggaatc tttgactccg
     5221 ccgaaaggca ggcgcaaatc gctgctggta tggcggttga taaacaccga tccggcctgt
     5281 attttttcgg caaaccgcca ggcgcgttca gtatcggcgg tataaatgca ggcaccgagc
     5341 ccgaacgggg aatcattggc aaggcagatg gcgtgttctt cgttttcggc gcgcaaaatc
     5401 agggcgacgg ggccgaatac ttcttctctc cagacgcggc aggcaggatt taccctgtct
     5461 aaaaccgtcg cagggtaaaa ccaccccgac ccctgtggaa ctttgcctcc ggtcaggcac
     5521 accgcgccgt ttgaaacggc atcttcaacc tgcccgtgaa cccggtcccg caaatcttcg
     5581 cggtgcagcg gtgcaagcgt ggtatcggga tgtttcgggt cgcccatttt caatttggcg
     5641 cattcggcga gaaacagctg aataaagcgg tcggctgcgg cttcggttac gatgatgcgc
     5701 ttggcggcgt tacacgattg ccccgcatcg cggaaacggg aataacaggc ttctgcggcg
     5761 gcgcgttcca aatcggcatc gggcatcacg ataaaggcgt tgctgccgcc gagctccaac
     5821 acggttttct tgaggtttgc gcccgcatgt gccgcaagaa tgcgccccgt atgcgtcgaa
     5881 ccggtaaacg ccatcgcatc ggtatcttcg actgccttga gcgtgtccgc ctcatccagc
     5941 cacgcgcctg ccagaggaat accgtctgaa gccaaatcga acaacgcccg actgacgcgt
     6001 gccacgctgg gcgcgggttt gacggcgcac gcgttgcccg cgcacatagc gggaacggca
     6061 aaacgcaata cctgccagac gggatagttc caaggcatga cggcaaacac cacgcccaaa
     6121 ggctcgaagc gcacctgact caaactcgcc tgcgtcgcga tggttttgtg ggcgagcagt
     6181 tcgggggcga ggcgggcgta atagcgtatc agttcgatag acttgacgat ttcggcacgg
     6241 cattcgtgca ggcagcgtcc gacttcttcg cacaccattt ccgcaaaacg ctctttttcc
     6301 gcctccaaac ggccggcaaa tttttgcaga cgcgcggcac gttcggttac gcccaattgc
     6361 gcgaacgccc tgccgtgcat tttcaaatcc gccagccgcc gttcaaactc cgcataatct
     6421 tgatcggggc ggcggtaaag cgtttcgccc gtaaatacat tgacactgtg aaacatcgaa
     6481 tcaacctgcc agttgcggga atatcgtttt cagtcccgac acaataatct ccaccgatac
     6541 cgccgccagc atcataccca taatgcggtt taaaatcgtc agccccgtcg cgcccagcag
     6601 gcggctgacc ttcccggcaa cgattaaaat ggcataacaa atcgcactga ccaccaaacc
     6661 ggccgcgata atcagcgcga tatcgctgta cgttttggct gccgaagcgt aaataatcac
     6721 ggtcgaaata ccgcccggac cgatggtgat cggtatggcg atgggcacga cggcaatcgc
     6781 ccctgcattg cgggcggggc gcgcttgccc cgtttccggc tgcgcgccga gattctgctt
     6841 ggcgggattg tcgttgccgt tcatcatcga aatggcgatc agcagcacca aaatcccgcc
     6901 gccgacctga aacgaaccga cgctgatgcc caaaaccttc aatagcgcac cgccgatcag
     6961 cgcaaatacc gcaatcacgg caaacacggc gacggcggcc gtccgcgcga ccttcctgcg
     7021 ctccttcgtg ctgtgtccgt tggtcaggtc aaggtaaagc gacaacgcgc taaacggatt
     7081 gatcagcacc aaaaaagcca caatcagctt gccgatttcc atacccaatc ccattatttc
     7141 ccctctttca aacccgtgcg gcaggcatcc gatgctgcaa attgccgccg caacggattt
     7201 ttccgttata attaaaaatc caagcaatac gccccatcat acccgaacga cggtatcttt
     7261 accatcagac aaggatgctt ttcatggcac tgacacttgc cgacgtagac aaaatcgccc
     7321 gactctcccg actgcagctg actgcggaag aaaaagaaaa atcgcttcaa gaattaaacg
     7381 acattttcac tatggtcgaa cagatgcaga acatcaacac agacggcatc gagccgatgg
     7441 cgcacccgca cgaggtcgcc ctccgcctgc gtgaagacga agtaaccgaa accgaccgcg
     7501 ccgccgaata ccaagccgtt gcgccggaag tacgcaaccg cctgtacatc gtaccgcaag
     7561 ttatcgaaga ataatccgaa tacgcttcag acggcatcag caataccgcc cgaagccctt
     7621 taaggatgga agatttatga cccaatacac attgaaacag gcaggcagcc tgttgcagtc
     7681 caaacagatt tccgccgtcg aactggcaag cgcatacctt gccgccattg ccgaaaaaaa
     7741 tcccgccctc aacggctaca tcaccatcga ccaagataaa accctcgccg aagcccgtgc
     7801 cgccgacgaa cgcatcgcac agggcaacgc ttcggcactt accggcgttc ccgtcgccta
     7861 caaagacatt ttctgccaaa ccggctggcg cagcgcgtgc gcgtccaaaa tgctcgacaa
     7921 cttcgtctcc ccctacacgg ccaccgtcgt ccaaaacctg ctcgacgaag gtatggtaac
     7981 gctcggccgc accaacatgg acgagttcgc tatgggttcg accaatgaaa actcattcta
     8041 cggcgcggcc aaaaacccgt ggaatccgga acacgtaccc ggcggttcgt caggcggttc
     8101 cgccgccgtc gttgccgcgc gcctcgcccc tgccgcgctc ggttcggaca cgggcggctc
     8161 tatccgccaa cccgcatcgc actgcggcat taccggcatc aaacctacct acggcacggt
     8221 ttcccgcttc ggtatggtcg cctacgcctc cagcttcgat caagccggcc cgatggcgca
     8281 aaccgccgaa gactgcgcga ttctgttgaa tgcaatggca ggtttcgacc ccaaagactc
     8341 caccagcttc gaacgcgaaa aagaagacta cacccgcgat ttggacaaac cgctcaaagg
     8401 cgtgaaaatc ggcctgccca aagaatactt cagcgaaggc aacagcaccg atgttcagac
     8461 ggcattgcaa aacaccattg atttgctgaa agcacaaggc gcggaactgg tcgaagtttc
     8521 cctgccgcaa accaagctgt ccatccccgc ctactacgtc ctcgcctccg cagaagccgg
     8581 caccaacctt tcacgttacg acggcgtacg ttacggacac cgtgccgccc aattcggcga
     8641 tttggaagaa atgtacggca aaacccgcgc cgaaggtttt ggcagcgaag tcaaacgccg
     8701 catcatgatc ggcacttacg tactgtcgca cggctactac gatgcctatt atctcaaagc
     8761 ccaaaaactg cgccgcctcg ttgccgatga ctttcagacg gcatttgcac ggtgcgacct
     8821 catcctcgcg ccgaccgcac cctccgccgc acccaaaatc ggagcggata cttctccggt
     8881 tgaaacctac ttgagcgaca tttacaccat cgccgtcaac ctcgccggac tgcccgcatt
     8941 gaccctgccc gcaggcttca gcggcggcgg actgcccgtc ggtgtacagc ttgtcggcaa
     9001 ctacttcgcc gaagccaaaa tcctcggtgc ggcgcatcaa atccaactca acagcgattg
     9061 gcacggcaaa cgacccgaat gaagcagaac cgcaccttta ccttccccga ttttcgcacc
     9121 gtttacagct atgcgccttt atatcggctg caacatttaa aatacacatt gcgaaaattt
     9181 ttcggaaaaa aagaaattta cgccttcgag cagtttgtca acgcctcccc tatccgtcag
     9241 gggctgttcc tccactgccc gcaggatgcc tatccgctgc tgcgcgaatt tgttgacagg
     9301 cgttttaact gcaaacgccg tttagatgcg atgacggcag attttctcat ggcggaaaaa
     9361 ctcttcggca cagacgttct gtgccaaatg gaagactgcc gcttccatct ggtcttggcg
     9421 cacctttcag acggcatcag cttgtggctc aaccgcaacg acaactgcgt cgaagaaggc
     9481 gcgtggtctt tatctttgcg cgatgaagca ggcaaccggc tgtatatggc gaccttcgcc
     9541 tttgtcggca cacacctgct gacagcctcc gtacaagggc cgtcaggtga agaagccaaa
     9601 gacaccgtcc gccgcataac caaacaactt cacggcttac gtccccaaca actgatggta
     9661 accgcactgc aatatttcgc cgccgcatta aaattagacg gcgcgatagg cattgcacaa
     9721 aaacatcaag tcaaattacg ctggaaactt aaaaagcgcg tcaaaatgaa ttacgacgca
     9781 ttctggcagg aatacggcgc aagtttggaa cgggacggct actggcatct tccccaaacc
     9841 cccgcccgca aagaccttgc cgacatcgaa agcaaaaagc gttcgatgta ccgcaagcgt
     9901 tatgaaatgc tggacgatat ggttacaaag atgaaggaca gtctgaaaac agaagcacgc
     9961 ggcatttcag acggcatcca aacggaaaaa ccgctccgcc ggacagtctg atgcgaagac
    10021 tatcgaattg atattttaga gaaagaacct cctatgactt gggaaactgt aatcggcttg
    10081 gaaatccacg tccaattgaa caccaaatcc aaaatcttca gcggtgcatc gaccgcattc
    10141 ggcgcagaac ccaacgcgca cgccagcgta gtggaatgcg cgctgccggg cgtactgccg
    10201 gtaatgaacc gcgaagtcgt tgaaaaagcc atcaaattag gtttggcttt ggatgcaaaa
    10261 atcaaccgga aaaacgtgtt cgaccgcaaa aactacttct atcccgactt gccgaaaggc
    10321 tatcaaatca gccagttgga tttgccgatt gtcgaacacg gcaaattgga aatcgtggtc
    10381 ggcggcgatg tgaaaaccat caacgtaacc cgcgcccata tggaagaaga cgcaggcaaa
    10441 tccgtgcacg agggcttgaa cggcgcgacc ggcatcgacc tgaaccgcgc cggcacgccg
    10501 ctgttggaag tggtatccga acccgaaatg cgctccgccg ccgaagccgt tgcctacgcc
    10561 aaagccttac acagcttggt aacctggctg gacatttgcg acggcaatat ggcggaaggt
    10621 tcgttccgca tcgatgccaa cgtatccgtt cgcccgaaag gccaagcgga attcggcacg
    10681 cgccgcgaaa ttaaaaacct caattccttc cgtttcttgg atcaggcgat taattacgaa
    10741 gccgaagcgc aaatcgagat tttggaagac ggcggcacag ttcagcaggc gacgatgctg
    10801 ttcgacccgg aaaaaggcga aacccgcgtg atgcgcctga aagaagacgc gcacgactac
    10861 ggctacttcc ccgatcccga tttgctgccc gtcatcattt cagatgccca aatgcaaaaa
    10921 gccaaagcag aaatgcccga gctgccgaaa gaaatggcgg cgcgtttcgt ggcggattac
    10981 ggcgtgtccg aatacgacgc gcgcctgctc accgccagcc gcgtgcaggc tgcctatttt
    11041 gaagaagccg ccaaagagag cggacaaggc aagccgactg ccaactggat gaacggcgaa
    11101 cttgccgcta cgctgaacaa agaaggcatg gaacttgccg acagcccgat taccgcccca
    11161 cgccttgccg cgctggtggg caaaattgcc gatggcacat taagcggcaa actggcgaaa
    11221 aaagcctttg aagccatgtg ggcggaaccg gaaaccagca ttgccgaaat catcgaaaaa
    11281 cacagtttgc aacagatgac cgataccggc gcggttgaag cgatggtgga cgaagtgctg
    11341 gcaaacaacg ccaaagccgt ggaacagttt aaatccggca acgaaaaagc cctgaatgcg
    11401 attgtggggc aagtgatgaa gaccagcaaa ggcaaagcca atcccgcgca ggtgcaggag
    11461 ttgattaaag ccaaacttgc ctgataagca agatgccgtc tgaaacccaa atccgacgtt
    11521 cagacggcat tttcacagtc tgaccacatt aaaacagcat aaaaaacaat attccatgaa
    11581 ccacaccgtt accctgcccg accaaaccac ctttgccgcc aacgacggcc aaaccgtttt
    11641 gtccgctgcc gcccgtcaaa acctcaatct gccccattcc tgcaaaaacg gtgtctgcgg
    11701 acaatgcaaa gccgaactgg ccagcggcga tattcaaatg ggcggacact cggaacaggc
    11761 tttatccgaa gcagaaaaag cgcaaggcaa gattttgatg tgccgcacca ccgcgcaaag
    11821 cgacatcagc ctcaacatcc ccggctgcaa agccgatgcc ctacccgtcc gcaccctgcc
    11881 cgcacgcatc gaaagtatgg ttttcaaaca cgatgtcgcc ctcctgaaac ttgccctgcc
    11941 caaagccccg ccgtttgcct tctacgccgg gcaatacatt gatttactgc tgccgggcaa
    12001 cgtcagccgc agctactcca tcgccaattc gcccgaccaa gaaagcattt tggaactaca
    12061 catccgcagg cgcgaaaacg gtgtctgctc ggaaatgatt ttcggcagcg aacccaaagt
    12121 caaagaaaaa ggcatcgtcc gcgttaaagg cccgctcggt tcgtttacct tgcaggaaga
    12181 cagcggcaaa cccgtcatcc tgccggcaac cgacacaggc tacgccccca tccgcagcat
    12241 cctgctcgac cttatccgcc aaaacagcag ccgcactgcc catttctact ggggcgcgcg
    12301 tcatcaagat gatttgtatg ccctcgaaga agcacaaggg ttggcatgcc gtctgaaaaa
    12361 cacctgcttc acccccgtat tgtcccgtcc cggagagggc tggcagggaa gaaaaggcca
    12421 cgtacaagac atcgcggcac aagaccaccc cgacctgtcg gaatacgaag tgtttgcctg
    12481 cggctctccg gctatgaccg aacaagcaaa aaatctgttt gtgcaacagc ataagctgcc
    12541 ggaaaacttg tttttctccg acgcattcac gccgtccgca tcataattcc tcggtataaa
    12601 gaggattcgg gctttccgtt cggaacacaa aaaacttccc gtccgtattt tccccgtgaa
    12661 aaaatgccgt ctgaaacctg attccggttt tcagacggca tatgtttttt cctgttcaag
    12721 gcgacaaccg ctcgcgtatc cagccgccat ccagcaaacg gtattggatg cggtcgtgca
    12781 gcctgctcgg cctgccctgc caaaactcaa tcaaatcggg aatcacaata tagccgcccc
    12841 aatgcggcgg acgcggcacg tgcaaaggat gtttgagtcc gaccgccgcc gcctttgcca
    12901 ccaataccgc cttgttcgga atcacctcgc tctgcgcgct tgcccacgca cccaaacggc
    12961 tctgatacgg gcgactctca aaatattcgt ccgacaactt ctccgccagc cttccgacac
    13021 gcccttccac gcgcacctga cgctccagct ccggccaaaa aaacgtcatc gccgcaaacg
    13081 gattgagttc cagcgaacgc cccttgcggc tgtggtaatt cgtaaagaaa acaaaacctt
    13141 ctgaattaac ctccttcaaa agcaccatac ggctgttggg cctcccgcgc ccgtcgaccg
    13201 ccgccacatt gaccgccgtc ggctcgttga cctcggcgcg taccgcctcg tccaaccacc
    13261 gctcgaactg ctcgatcgga ttatcggcgc aatcggcttc cgacaattcc cgtttgctgt
    13321 aatcttcccg aatattgtgc aaatccattt accgctcctc ttatcatttg aaagattcta
    13381 ctcccgcacg caaaccgatt tcaaccgttg cacaaacttt gtccccaaag ccgcagcgac
    13441 gatttcatcc gcaaaaccgc cgcatcaggt acaatatcga accgtccgac cgaggacggc
    13501 attttatcaa cccgtcctgc cgcacacgcc gcagaagaac cgccttatca ggcgagttag
    13561 gaaaaatgat gtccaagcaa cccaccagca aacgccaatg gcgcgacggc gcagccccgt
    13621 ctgccaagaa aaccgccaaa cctttcaaaa gcaaagcccg tcccaaagac gaaacgcgca
    13681 aaaccgccgc ccaagcttac ggacaaaaag cttcagacgg catcaagctg caaaacgccc
    13741 ccaaacagcg cgccgccaaa gccaaaaaac tcgtcgtccg caatcccaac caaaaaatta
    13801 tggaacacgc gcgcgatttg aaagaacgcc gcagcgacct gtcgcgtatg gaacccgaac
    13861 gcctgcaaaa agtgcttgca gcctccggcg tcggctcgcg ccgcgaaatg gaagaatgga
    13921 tcaacaacgg ctgggtaacg gtcaacggca aaaccgcgca actgggcgac aaagttaccc
    13981 ccgacgacca cgttaccgtc aaaggcagca tcatcaaact caaatgggcc gaccgcctgc
    14041 cgcgcatcat cctgtattac aaacaagaag gcgaaatcgt ttcccgcgac gacccgcaag
    14101 gccgcgtcag catattcgac cgcctgccgc aggccgccag cagccgctgg gtcgccatcg
    14161 gacgcttgga catcaacacc agcggacttc tgattctcac tacctccggc gaactcgtcc
    14221 aacgtttcgc ccaccccagc ttcgaagtcg aacgcgaata cgccgtgcgc gtactgggcg
    14281 ggctgactac cgaacaaatg cgcagtctca ccgaagaagg cgtgatgctc gaagacggct
    14341 tggcaaaagt cgaacgcatc tacgaacaag gcggcgaagg cgcaaacaaa tggtacaaca
    14401 tcgtgattaa agaaggccgc aaccgcgaag tgcgccgcat attcgaaagc caaggcctca
    14461 cagtcagccg cctcgtgcgc gtcgccttcg gccccatcgg actgcccaac cgcctcaaac
    14521 gcggacagtt ctacgaactc aaccccgccg aagtcgccaa catcctcaaa tgggcggata
    14581 tgctgctgcc gggcgaacgc cgccgcaaaa aagcctgaaa gtaaaaatgc cgtctgaaac
    14641 acctgctgtt tcagacggca ttttattcgg gcgttttcag gagaaaaggt cgagtgcttt
    14701 gacaaagacc atcaccacgc cgtaggcgag cggtatgacg gccaatgccc aacgccacca
    14761 gaccgatatg ccgtcgccgg aaactttttc acccacaagg taagcgtcgg atatggcggt
    14821 ttcgtcgtcg gggttgccgc tgcgtgcggc ggttttgatg tctttttcgt ggtgtttttc
    14881 gtgtacggat ttgacggcga ggttgcacaa cagtccgaca atcaacaatc ccgccataat
    14941 gtacatggtt acgctgtatg cctgtgccgc cggtatgccg ctgtcgattt ggctttggcg
    15001 tatgtaattg accagtaccg ggccgatgac ggcggcggtt gaccaggcca gcaggatgcg
    15061 cccgtgaatc gcgccgacct gataggtgcc gaacaggtct ttcaggtagg cgggaatggc
    15121 ggcaaatccg ccgccgtaca tggaaataat cacgcagaag ccgatgatga acagggcttt
    15181 gctgccgcct tcgccgatgg agggaacggc gaaatacagc agcgaaccga gtacgaagaa
    15241 gatggtgtag gtgtttttgc gtccgatttt gtcggaaacg ctcgaccaca aaaagcgtcc
    15301 gcccatatta aacaggctca ggaggctgac gaagcctgcc gccgcacctg cgccgactgc
    15361 cgcctgcctg cctgcggagg tttcggaaaa gagttcctga atcatcacgg atgcctggcc
    15421 caatacgccg atgccggcgg ttacgttcag gcacaatacc cagaacaaca gccaaaactg
    15481 cggcgttttc atggcttggg acacgttgac atgattgctg ctgaccggct tgttttgcgt
    15541 tttcggcacg gtatagcctt caggtttcca gccgtcggca ggtacgcgga tggtaaacgc
    15601 gccgaacatc atcagtgcga ggtaaaacag gcccaatacg gcaaaggttt cggcaacccc
    15661 gaccgaagcg gcgtttgaaa aggcgttcat cagtgatacg gaaagcggcg aggccagcat
    15721 tgcgccgccg ccgaaaccca taatcgccaa accggtcgcc atacccggct tgtcgggaaa
    15781 ccatttcatc agcgtggaaa ccggcccgat gtagcctaag cctaagccta cgccgccgat
    15841 gacgccgttg cccaaataaa gcaggaagag gttgtgcgta cgcacgccga atgcggatac
    15901 gaagaagccc aggctgaaac agcaggcggc ggcaaatatg gctttgcgcg gccctacccg
    15961 ttccatccat gtgccgaaca gggcggccga cgcgcccagc atcgcgagtg cgatactgaa
    16021 aatccaacct acggtcgtca gcttccaatc tccggccgcc gattcggtta tgccgataag
    16081 tttggtcagc ggcgcgttga atacggaata ggcgtaaatc tgcccgatgg caaggtgcac
    16141 cgctaatgct gcgggcggca cgagccaacg gttgaaaccc ggcttggcaa tgcttgcctc
    16201 acggtctaaa aacttcataa catcctcttt ctgtcagttg aaaaataaaa tttcatttgc
    16261 ccaatggaaa cttattaaaa att
//
LOCUS       DAXFZM010000056        16162 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.056, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000056 DAXFZM010000000
VERSION     DAXFZM010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16162)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16162)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16162
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.056"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            70..1473
                     /locus_tag="ACFJAG_001418"
     CDS             70..1473
                     /locus_tag="ACFJAG_001418"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HFC3980682.1"
                     /translation="MKKIQADIVVIGGGTAGMGAFRNARLHSDNVYLIENNVFGTTCA
                     RVGCMPSKLLIAAAEARHHALHTDPFGVHLDKDSIVVNGEEVMRRVKSERDRFVGFVV
                     TDVEEWPADKRIMGSAKFIDEHTVQIDDHIQIAAKSFVIATGSRPVILPQWQSLGDRL
                     IINDDVFSWDTLPKRVAVFGPGVIGLELGQALHRLGVKVEIFGLGGIIGGISDPVVSD
                     EAKAVFGEELKLHLDAKTEVKLDADGNVEVHWEQDGEKGVFVAEYMLAAVGRRPNVDN
                     IGLENINIDKDARGVPVADPLTMQTSIPHIFIAGDASNQLPLLHEAADQGKIAGDNAG
                     RYPNIGSGLRRSTIGVVFTSPQIGFVGLKYAQVAAQYQADEFVIGEVSFKNQGRSRVM
                     LVNKGHMRLYAEKATGRFIGAEIVGPAAEHLAHLLAWAHQMKMTVPQMLDMPFYHPVI
                     EEGLRTALRDADAKLKA"
     gene            1760..2137
                     /gene="sdhC"
                     /locus_tag="ACFJAG_001419"
     CDS             1760..2137
                     /gene="sdhC"
                     /locus_tag="ACFJAG_001419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045273 - respiratory chain complex II
                     (succinate dehydrogenase) [Evidence IEA];
                     GO_function: GO:0000104 - succinate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, cytochrome b556
                     subunit"
                     /protein_id="HFC3980683.1"
                     /translation="MSVKLRPVYLDLPNIRLPIPGIVSILHRISGVGLFIMLPFLLYF
                     LSGTLSQESAFETYRAIVSHPLVKLVLIGILWAYLHHSLAGIRFLFLDAHKGLELNTA
                     RNTAKAVFASALVLTVVLGALLW"
     gene            2131..2472
                     /gene="sdhD"
                     /locus_tag="ACFJAG_001420"
     CDS             2131..2472
                     /gene="sdhD"
                     /locus_tag="ACFJAG_001420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0045273 - respiratory chain complex II
                     (succinate dehydrogenase) [Evidence IEA];
                     GO_function: GO:0000104 - succinate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, hydrophobic membrane
                     anchor protein"
                     /protein_id="HFC3980684.1"
                     /translation="MVERKLTGAHYGLRDWVMQRATAVIMLIYTVALLVVLFALPKEY
                     PAWQAFFSQAWVKVFTQVSFIAVFLHAWVGIRDLWMDYIKPFGVRLFLQVATIVWLVG
                     CLVYSVKVIWG"
     gene            2475..4238
                     /gene="sdhA"
                     /locus_tag="ACFJAG_001421"
     CDS             2475..4238
                     /gene="sdhA"
                     /locus_tag="ACFJAG_001421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase flavoprotein subunit"
                     /protein_id="HFC3980685.1"
                     /translation="MGFPVRKFDAVIVGGGGAGLRAALQLSKSGLNCAVLSKVFPTRS
                     HTVAAQGGISASLGNVQEDRWDWHMYDTVKGSDWLGDQDAIEFMCRAAPEAVIELEHM
                     GMPFDRVESGKIYQRPFGGHTAEHGKRAVERACAVADRTGHAMLHTLYQQNVRANTQF
                     FVEWTAQDLIRDENGDVVGVTAMEMETGEVYIFHAKAVMFATGGGGRIYASSTNAYMN
                     TGDGLGICARAGIPLEDMEFWQFHPTGVAGAGVLITEGVRGEGGILLNADGERFMERY
                     APTVKDLASRDVVSRAMAMEIYEGRGCGKNKDHVLLKIDHIGAEKIMEKLPGIREISI
                     QFAGIDPIKDPIPVVPTTHYMMGGIPTNYHGEVVVPQGDEYEVPVKGLYAAGECACAS
                     VHGANRLGTNSLLDLVVFGKAAGDSMIKFIKEQSDWKPLPANAGELTRQRIERLDSQT
                     DGENVDALRRELQRSVQLHAGVFRTDEILSKGVQEIMAIAERVKRTEIKDKSKVWNTA
                     RIEALELDNLIEVAKATLVSAEARKESRGAHASDDHPERDDENWMKHTLYHSDTNTLS
                     YKPVHTKPLSVEYIKPAKRVY"
     gene            4358..5065
                     /locus_tag="ACFJAG_001422"
     CDS             4358..5065
                     /locus_tag="ACFJAG_001422"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008177 - succinate dehydrogenase
                     (quinone) activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit"
                     /protein_id="HFC3980686.1"
                     /translation="MEKMSFEIYRYNPDVDAKPYMQRYELELEPTDVKLLDALVRLKA
                     QDDTLSFRRSCREGICGSDGMNINGKNGLACLTDLRSLKQPVKIRPLPGLPVIRDLIV
                     DMTQFFKQYHSVKPYVVNDNPIDADKERLQTQEERKELDGLYECILCACCSTACPSFW
                     WNPDKFVGPSGLLNAYRFIADSRDTITNERLDNLNDPYRLFRCHTIMNCVDVCPKHLN
                     PTRAIGKIKEIMLKRVV"
     gene            5069..5317
                     /locus_tag="ACFJAG_001423"
     CDS             5069..5317
                     /locus_tag="ACFJAG_001423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase assembly factor 2"
                     /protein_id="HFC3980687.1"
                     /translation="MMVFDDIAKRKIRFQTRRGLLELDLIFGRFMEKEFEHLSDKELS
                     EFSEILEFQDQELLALIHGHSETDKGHLIPMLEKIRRA"
     gene            5429..6712
                     /gene="gltA"
                     /locus_tag="ACFJAG_001424"
     CDS             5429..6712
                     /gene="gltA"
                     /locus_tag="ACFJAG_001424"
                     /EC_number="2.3.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004108 - citrate (Si)-synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HFC3980688.1"
                     /translation="MSKSIKLNVPGRAGLELPVLEASIGHDVVDIRGLTKNTGLFAFD
                     PGFVSTASCESKITYIDGDQGLLYYRGYPIEQLAEKSDYLEVCYLLIYGELPTPEQKA
                     EFDNTVRRHTMVHEQLTWFFRGFRRDAHPMAMMVGVVGALSAFYQDSLDITNPEHRKI
                     AIYRLISKIPTIAAMCYRYSNGLPFNYPKNNLSYSENFLHMMFATPCEDYKPNPVLAR
                     ALDRIFILHADHEQNASTSTVRLAGSSGANPFACIAAGIACLWGASHGGANEAVLKML
                     DEIGDVSNVAAYMEGVKQRKYRLMGFGHRVYRNMDPRASIMRETCYEVLKELGLEDSP
                     KFKLAMELEQIALKDPFFIERKLYPNVDFYSGIVLSALGIPTEMFTVIFALSRSVGWI
                     SHWHEMISDPSLKIGRPRQLYTGSERRDYVPAGER"
     gene            6917..9745
                     /locus_tag="ACFJAG_001425"
     CDS             6917..9745
                     /locus_tag="ACFJAG_001425"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004591 - oxoglutarate dehydrogenase
                     (succinyl-transferring) activity [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HFC3980689.1"
                     /translation="MMDEKLNFSYLFGSNAPYIEELYEAFLENPDAVDEKWKQYFTDL
                     SKQPGTVAVDVAHTPIRESFVTLAKKKIASAVAGGADEAMLKKQVSVLRLISAYRIQG
                     VGAAQLDPLKRIPPRDIEALDPKFHGLSDADMALRFNMGEGDFANRGKLPLSQIISNL
                     KQTYCGHIALEYIYIPNTEERRWVRNYFESVLSTPHYNADQKRRILKEMTAAETLERY
                     LHTKYVGQKRFGVEGGESAIAGLNYLIQNAGKDGVEEVIIGMAHRGRLNVLVNILGKK
                     PGDLFAEFEGRAEIKLPSGDVKYHMGFSSDIATPHGPMHVSLAFNPSHLEIVNPVVEG
                     SARAKQKRLGENGRDKVLPVLIHGDSAFIGLGVNQATFNLSKTRGYTTGGTVHIVINN
                     QIGFTTSDIRDTRSTVHCTDIAKMVSAPVIHVNGDDPERVCFAIQAALDYRKKFHKDI
                     VIDVVCYRKWGHNEGDDPTLTQPMMYKKVSQHPGARALYTEQLIAEGVVTQVEADGYI
                     QAYRDALDKGEHVEQTTLSNFQRTQIDWSKYQGKDWREKIETGLPAADIERLTEKFTA
                     VPEGFALHPTAKRVIEARKAMASGKQAIDWGMAETLAYASLLTKGHGVRISGEDSGRG
                     TFSHRHAVLHDQKREKWDDGTYVPLRNMGEGLGEFLVIDSILNEEAVMAFEYGFACSA
                     PDKLTIWEAQFGDFANGAQVTIDQFLSSGETKWGRLCGLTTILPHGYDGQGPEHSSAR
                     VERWLQLCSENNMQVIMPSEASQMFHLLQRQVLGSYRKPLVIFMSKRLLRFKGAMSPL
                     ENFTEGSTFRPVIGDTAERASNDSVKRVVLCAGQVYYDLEAGRAERKLEDDVAIVRVE
                     QLYPFPYDEVKAELAKYPNAKSVVWAQEEPKNQGAFYQIRHRIEDVISEEQKLSYVGR
                     PSSASPAVGYSSKHIAQLKQLVEDALAL"
     gene            9845..11026
                     /gene="odhB"
                     /locus_tag="ACFJAG_001426"
     CDS             9845..11026
                     /gene="odhB"
                     /locus_tag="ACFJAG_001426"
                     /EC_number="2.3.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045252 - oxoglutarate dehydrogenase
                     complex [Evidence IEA];
                     GO_function: GO:0004149 - dihydrolipoyllysine-residue
                     succinyltransferase activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase complex
                     dihydrolipoyllysine-residue succinyltransferase"
                     /protein_id="HFC3980690.1"
                     /translation="MIIDVKVPMLSESVSEGTLLEWKKKVGEAVARDEILIDIETDKV
                     VLEVPSPQAGVLVEIVAQDGETVVADQVLARIDTAATVAAEAPAAAPAEAAPAAVPAA
                     AQNNAAMPAAAKLAAETGVDVNVLQGSGRDGRVLKEDVQNAAAKPAAAVAPAVALPAG
                     ARPEERVPMSRLRARVAERLLASQQENAILTTFNEVNMKPIMDLRAKYKEKFEKEHGV
                     KLGFMSFFVKAAVAALKKYPVVNASVDGKDIVYHGYFDIGIAIGSPRGLVVPILRDAD
                     QMSIADIEQAIVDYAKKAKDGKIAIEDLTGGTFSITNGGTFGSMMSTPIINPPQSAIL
                     GMHATKERAVVENGQVVVRPMMYLALSYDHRIIDGREAVLTLVAIKDALEDPVRLLLD
                     L"
     gene            11287..12720
                     /gene="lpdA"
                     /locus_tag="ACFJAG_001427"
     CDS             11287..12720
                     /gene="lpdA"
                     /locus_tag="ACFJAG_001427"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003745605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004148 - dihydrolipoyl dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HFC3980691.1"
                     /translation="MSQYDVVVIGAGPGGYVAAIRAAQLGFKTACVDAGVNKAGNAPA
                     LGGTCLNVGCIPSKALLQSSEHFHAAQHDFAEHGITVGDVKFDVAKMIERKDAIVTKL
                     TGGVKFLFQKNKVTSLFGTASFAGKNGDAYQIEVDNKGEKTVIEAKHVIVATGSVPRP
                     LPQVAIDNVNVLDNEGALNLTEVPAKLGVIGSGVIGLEMGSVWNRVGAEVTILEAAPT
                     FLAAADQQIAKEAFKYFTKEQGLSIELGVKIGDIKSEGKGVSVAYETAAGEAKTEVFD
                     KLIVAIGRIPNTKGLNAEAVGLEKDERGFIKVDGECRTNLPNVWAIGDVVRGPMLAHK
                     ASDEGVAVAERIAGQKPHIDFNNVPFVIYTDPEIAWVGKTEEQLKAEGVEYKKGTSGF
                     GANGRALAMGKAKGTVKVLADAKTDRILGVHMIGPVVSELVTEGVTALEFFASSEDIA
                     RIIHAHPTLSEVVHEAALAADKRALHG"
     gene            12840..13127
                     /locus_tag="ACFJAG_001428"
     CDS             12840..13127
                     /locus_tag="ACFJAG_001428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980692.1"
                     /translation="MNKEIVGIFFIPMGIISMCMAALWQMYVMMTETYTLNRFKDKEL
                     VWRVALLFISFSLAVYLLCPNSRKKGIVFFILGGGGAVMYLLARMWLPFSK"
     gene            13145..14365
                     /gene="sucC"
                     /locus_tag="ACFJAG_001429"
     CDS             13145..14365
                     /gene="sucC"
                     /locus_tag="ACFJAG_001429"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HFC3980693.1"
                     /translation="MGLAAGRFLKPTHLKEKSMNLHEYQAKELLASYGLPVQGGILAH
                     NGEEAAAAYDKLGGKFAVVKAQVHAGGRGKAGGVKVVKSREKAKEVAESLIGTNLVTY
                     QTDANGQPVNSVLVCEDMYPVQTELYLGAVVDRSTRRVTFMASTEGGVEIEKVAAETP
                     EKIFKVTVDPLVGLQPCQAREVAFQLGLKDKQINEFAKLMTGAYKAFVENDFALFEVN
                     PLAVRENGALACVDGKIGIDSNALYRLPKIAELRDKSQENERELKASEFDLNYVALEG
                     NIGCMVNGAGLAMATMDIIKLKGGQPANFLDVGGGATKDRVVEAFKLILEDKSVKGVL
                     INIFGGIVRCDMIAEAIVAAVKEINVNVPVVVRLEGNNAELGAKILNESGLKLTSADG
                     LNDAAEKIVAAVNA"
     gene            14376..15266
                     /gene="sucD"
                     /locus_tag="ACFJAG_001430"
     CDS             14376..15266
                     /gene="sucD"
                     /locus_tag="ACFJAG_001430"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016655272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HFC3980694.1"
                     /translation="MSVLINKDTKVLVQGFTGKNGTFHSEQALAYGTKVVGGVTPGKG
                     GQTHLDLPVFNTMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPT
                     LDMLKAKRYLETNGNGTRLVGPNCPGVITPGECKIGIMPGHIHTPGRIGIISRSGTLT
                     YEAVAQTTNLGLGQSTCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEE
                     EAAEYIQSNVTKPVVGYITGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYT
                     RSPAELGTTMLEVLKAKGLA"
     gene            complement(15649..16035)
                     /locus_tag="ACFJAG_001431"
                     /pseudo
     CDS             complement(15649..16035)
                     /locus_tag="ACFJAG_001431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611093.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT         4102 a         4002 c         4167 g         3891 t
ORIGIN      
        1 taaatgctgt ctgaaaccga tatgttctgt gtcggcaatg tttcagacga aaacggaagg
       61 acaaagatta tgaaaaaaat tcaagcggat atcgtcgtaa tcggcggcgg tactgccggt
      121 atgggtgcgt ttcgcaatgc ccgtttacat tcggataatg tttacctgat tgaaaacaat
      181 gtgttcggca caacctgcgc gcgcgtgggc tgtatgcctt ccaaactctt gattgccgcc
      241 gcagaagcgc gtcaccacgc attgcatacc gaccccttcg gcgtgcattt ggacaaagac
      301 agcatcgtcg tcaacggaga agaggttatg cggcgcgtca aatccgagcg cgaccgtttt
      361 gtcggctttg tcgttaccga tgtggaagaa tggcctgccg acaagcgcat catgggctcg
      421 gctaaattca tcgacgagca taccgtccaa atcgacgacc atatccaaat tgcggcaaaa
      481 agtttcgtga ttgctaccgg ttcgcgtccc gtcatcctgc cgcagtggca gtctttgggc
      541 gaccgtttga ttatcaacga cgacgttttc tcgtgggata cgctgcctaa gcgcgttgcc
      601 gtgttcgggc cgggcgttat cggtttggaa ctgggtcagg cattgcaccg tttgggtgtg
      661 aaagttgaaa ttttcggttt gggcggaatc atcggcggca tttccgaccc cgttgtttca
      721 gacgaggcga aagccgtgtt cggagaagaa ttgaaactgc atctggatgc taaaaccgag
      781 gtcaaactcg acgcagacgg caatgtagaa gtccattggg agcaggatgg cgaaaaaggc
      841 gtatttgttg ccgaatatat gttggcagcc gtaggtcgcc gtccgaacgt tgacaatatc
      901 ggtttggaaa acatcaatat cgacaaagac gcgcgcggcg tacccgttgc cgatccgctg
      961 accatgcaga ccagcattcc gcatatcttt attgcgggcg acgcgtccaa ccaactgccc
     1021 ctgctgcatg aagccgccga ccaaggtaag attgccggcg ataacgcggg ccgctacccg
     1081 aatatcggca gcggtttgcg ccgcagcacc attggcgtgg tgtttaccag tccgcaaatc
     1141 ggctttgtcg gtttgaaata cgcgcaggtt gccgcgcaat accaagccga cgaatttgtc
     1201 atcggcgaag tatcgttcaa aaatcaaggt cgcagccgcg tgatgctggt aaacaaaggc
     1261 catatgcgcc tgtatgccga aaaagccacc ggccgcttta tcggcgcgga aatcgtaggc
     1321 cctgccgccg aacatttggc tcacttgttg gcatgggcgc atcaaatgaa gatgaccgtt
     1381 ccgcaaatgc tggatatgcc gttctaccat cctgttatcg aggaaggtct gcgtaccgcg
     1441 ttgcgcgatg ccgatgcgaa attgaaagcc tgaccgatat ggcaaaacaa tgccgcctga
     1501 aatttttttc agacggcatt ttatttttgg ggatggggtt gggggtcgga tgctgatacc
     1561 gtgtcgggaa gggagcggca aaactaaaaa tctttctttt aatctgctgt ttccacgcgt
     1621 gtttgtcaaa atctatcagt ttgtttttaa aatacactgt tcaaaatggg ataaaacagg
     1681 taaattaacg ttgatgtaac ccagtgtagc aatgggttta cggtttttga gtcgatatat
     1741 aactacagag gaattgacta tgtctgtcaa actgcgtcct gtttatctgg atttgccgaa
     1801 catccgtctg ccgatacccg ggatagtttc catccttcac cgcattagcg gggtcgggct
     1861 gtttattatg ctgcctttcc tgctgtattt tctgtccggt accctgagtc aagagtctgc
     1921 atttgaaact taccgtgcca ttgtttccca tcctttggtc aagctggttt taatcggtat
     1981 attgtgggct tatctgcacc attctctcgc cggtatccgc tttttatttt tggatgcgca
     2041 caaaggcctt gagctgaata ctgcgcgcaa taccgctaaa gccgtatttg cttctgcatt
     2101 ggttttgact gtcgttttgg gagcgttgtt atggtagaac gtaaattgac cggtgcccat
     2161 tacggtttgc gcgattgggt aatgcagcgt gcgactgcgg ttattatgtt gatttatacc
     2221 gttgcacttt tagtggttct atttgccctg cctaaagaat atccggcatg gcaggcattt
     2281 tttagtcaag cttgggtaaa agtatttacc caagtgagct ttatcgccgt attcttgcac
     2341 gcttgggtgg gtatccgcga tttgtggatg gactatatca aacccttcgg cgtgcgtttg
     2401 tttttgcagg ttgccaccat tgtctggctg gtcggctgcc tcgtgtattc agttaaagtg
     2461 atttgggggt aagtatgggt tttcctgttc gcaagtttga tgccgtgatt gtcggcggtg
     2521 gcggtgcagg tttacgtgca gccctccaat tatccaaatc cggtttgaat tgtgccgttt
     2581 tgtctaaagt gttcccgacc cgctcgcata ccgtagcggc gcagggcggt atttccgcct
     2641 ctctgggtaa tgtgcaggag gaccgttggg actggcacat gtacgatacc gtgaaaggtt
     2701 ccgactggct gggcgaccaa gatgcgattg agtttatgtg tcgcgctgcg cctgaagcgg
     2761 tgattgagtt ggaacacatg ggtatgcctt ttgaccgcgt tgaaagcggc aaaatttatc
     2821 agcgtccttt cggcggacat actgccgaac atggtaaacg tgcggtagaa cgtgcatgtg
     2881 cggttgccga ccgtaccggt catgcgatgt tgcatacttt gtaccaacaa aacgtccgtg
     2941 ccaatacaca attctttgtg gaatggacgg cgcaagattt gattcgtgat gaaaacggcg
     3001 atgtcgtcgg cgtaaccgcc atggaaatgg aaacgggcga agtttatatt ttccacgcca
     3061 aggccgtgat gtttgctacc ggtggcggcg gtcgtattta tgcttcttct accaatgctt
     3121 atatgaatac cggtgacggt ttgggcattt gcgcccgtgc gggcattccg ttggaagata
     3181 tggaattctg gcaattccac ccgaccggcg tggcgggtgc gggcgtgttg attaccgaag
     3241 gcgtacgcgg cgagggcggt attctgttga acgccgacgg cgaacgcttt atggaacgct
     3301 atgcgccgac cgtaaaagac ttggcttctc gcgacgtggt ttcacgcgcg atggcgatgg
     3361 aaatctatga aggtcgcggc tgtggtaaaa acaaagacca cgtcttactg aaaatcgacc
     3421 atatcggtgc agaaaaaatt atggaaaaac tgccgggcat ccgcgagatt tccattcagt
     3481 ttgccggtat cgatccgatt aaagacccga ttccggttgt gccgactacc cactatatga
     3541 tgggcggcat tccgaccaat tatcacggtg aagttgttgt tccgcaaggc gacgagtacg
     3601 aagtacctgt aaaaggcctg tatgccgcag gtgagtgcgc ctgtgcttcc gtacacggtg
     3661 cgaaccgttt gggtacgaac tccctgctgg acttggtggt gttcggcaaa gctgccggtg
     3721 acagcatgat taaattcatc aaagagcaaa gcgattggaa acctctgcct gctaatgccg
     3781 gtgagttgac ccgccaacgt atcgagcgtt tggacagtca aaccgatggt gaaaacgttg
     3841 atgcattgcg tcgcgaactg caacgctccg tacaactgca cgccggcgtg ttccgtaccg
     3901 atgagattct gagcaaaggc gttcaagaaa tcatggcgat tgccgagcgt gtgaaacgta
     3961 ccgaaatcaa agacaagagc aaagtgtgga ataccgcgcg tatcgaagct ttggaattgg
     4021 ataacctgat tgaagtggcg aaagcgactt tggtgtctgc cgaagcacgt aaagaatcac
     4081 gcggtgcgca cgcttcagac gaccatcctg agcgcgatga cgaaaattgg atgaaacaca
     4141 ccctgtatca ttcggacacc aataccttgt cttacaaacc ggtacacacc aagcctttga
     4201 gcgtggaata catcaaaccg gccaaacgcg tttattgatg cgttttcaga cggtcttcgc
     4261 ctcaaaggtc gtctgaaacc taaccatacc cacattgaac tgcttgaatt tataatacaa
     4321 aatcattggg cagttgatga gaaaaggaac acttctcatg gaaaaaatga gttttgaaat
     4381 ttaccgttac aacccggacg ttgatgccaa gccttatatg cagcgttacg agttggaatt
     4441 ggaaccgacc gacgtgaaac ttttggacgc tttggtacgc ctgaaagcac aagacgatac
     4501 cttgtctttc cgccgctcct gccgcgaagg gatttgcgga tcggacggta tgaacatcaa
     4561 cggcaaaaac ggcttggcgt gtctgaccga tttacgcagc ttgaaacagc ctgtcaaaat
     4621 ccgcccgctg cccggtctgc ccgtcatccg cgacctgatt gtggatatga cccagttctt
     4681 caaacaatac cattccgtca aaccttatgt tgttaacgac aatccgattg atgcggacaa
     4741 agagcgtctg caaactcagg aagagcgcaa agagttggat ggtttgtacg aatgtatttt
     4801 gtgcgcctgc tgttcgaccg cctgtccgtc attctggtgg aatcccgaca aattcgtcgg
     4861 tccgtccggc ttgctgaacg cctaccgctt cattgcggac agccgagata ccatcactaa
     4921 tgagcgtttg gataatttga acgatccgta ccgtttgttc cgctgccaca ccattatgaa
     4981 ctgcgtggac gtatgtccca aacacttgaa tccgacccgg gccatcggta agattaaaga
     5041 gattatgttg aaacgggttg tttaagaaat gatggttttt gacgacattg ccaaacggaa
     5101 aatccgtttt caaacccgcc ggggattgtt ggaactagat ttaatcttcg gcaggtttat
     5161 ggaaaaagaa ttcgagcatt tgagcgataa agagctgtcc gagttttccg aaatccttga
     5221 atttcaagat caagaattgc ttgccttgat tcacgggcat tcggaaacgg acaaagggca
     5281 ccttatcccg atgcttgaaa aaatcagacg ggcatgaggc atctgaaatt tgtctgaggg
     5341 cagatttcaa aatgcaaagg ccgtctgaaa gcaaagaacg tgctgcggat gcagtaacgt
     5401 gggttataac ttgcaaagga gcgataatat gtccaaatca atcaaactca acgtaccggg
     5461 tcgggcaggt ttggagctgc cggtattgga agccagcatc gggcatgatg tggttgacat
     5521 tcgggggctg acaaaaaata caggtttgtt tgccttcgac cccggatttg tttcaaccgc
     5581 aagctgtgag tctaaaatta cttacatcga cggcgatcaa ggcttgcttt attatcgcgg
     5641 ataccccatc gagcagctgg ccgaaaagtc cgattatttg gaagtctgct acctgttgat
     5701 ttacggcgaa ctgccgactc ccgagcaaaa ggcagaattt gacaatacag tccgccgcca
     5761 cacgatggtg catgaacagc tgacttggtt cttccggggt ttccgccgcg acgcgcatcc
     5821 gatggcgatg atggtcggcg tggtcggcgc gctgtctgcg ttctaccaag acagcttgga
     5881 cattactaat cccgaacacc gcaaaatcgc gatttaccgc cttatttcca aaatcccgac
     5941 cattgcggca atgtgttacc gctattcaaa cggtctgccg ttcaattatc cgaagaataa
     6001 tctttcttat tcagaaaact tccttcatat gatgtttgcc acaccgtgtg aagactacaa
     6061 acctaatccc gttttggcac gcgcgctcga ccgcatcttt attttgcatg ccgaccacga
     6121 gcaaaacgcc tcaacttcaa ccgtccgtct ggcaggctct tcgggtgcga acccgtttgc
     6181 ctgtattgct gccggtatcg cctgcctgtg gggtgcttcg cacggcggtg cgaacgaagc
     6241 cgtgttgaaa atgctggatg aaatcggcga tgtgtccaat gttgccgcat acatggaagg
     6301 cgtgaaacag cgcaaatacc gcctgatggg cttcggacac cgggtatacc gcaatatgga
     6361 tccgcgtgcc agcattatgc gcgaaacctg ctatgaagtt ttgaaggaat tgggcttgga
     6421 agacagtccg aaattcaaac tggcgatgga attggaacag attgcgctga aagacccgtt
     6481 ctttatcgaa cgcaaactgt atcccaatgt cgatttctat tccggcatcg tcctgtccgc
     6541 gctgggcatc ccgaccgaaa tgtttaccgt catcttcgcc ctgtcgcgca gcgtgggctg
     6601 gatttcgcac tggcacgaga tgattagcga tccttcgctg aaaatcggcc gcccgcgcca
     6661 gctttatacc ggttcggaac gccgcgatta tgtgccggca ggcgagaggt aacatacatt
     6721 aatatattgt caaacaggca atatcagaga accggattgt ttcctgaatc cgtctgattg
     6781 tagtcggatg aaatcaagac aagcaatccg gtttaaaata gggtagaata aaatgtcttt
     6841 tcagacggca tcagttcagc cgtcaggacg cggacttcta ccctttgttt atattttaaa
     6901 gaaaagagcg cacgccatga tggacgaaaa actcaatttc tcttatctgt tcggttcgaa
     6961 cgcaccctac attgaggaat tgtacgaggc ttttttggaa aaccccgatg cggttgatga
     7021 aaaatggaag cagtatttca ccgatttgag caaacagccg gggacggttg ctgtcgatgt
     7081 cgcacacaca ccgattcgcg aatcatttgt tactttggcg aaaaagaaaa ttgcatctgc
     7141 cgttgcgggc ggtgcggatg aggcaatgct gaaaaagcaa gtcagcgttt tacggctgat
     7201 ttctgcctat cgtatccaag gcgtgggtgc ggcccaactt gatccgctca aacgtatccc
     7261 tccgcgcgat attgaagccc tcgatccgaa attccacggt ctgtcagatg ccgatatggc
     7321 gcttcgattc aatatgggcg agggtgattt tgccaatcgc ggcaaactgc ccttgtccca
     7381 aatcatcagc aacctcaaac aaacctactg cggccacatc gcattggaat atatctatat
     7441 tcccaatacc gaagagcgcc gttgggtacg caactatttt gaaagcgtat tgtccacacc
     7501 gcattacaat gccgatcaaa aacgccgtat cttgaaagag atgaccgctg ccgagacttt
     7561 ggaacgttat ctgcatacca aatatgtcgg tcagaaacgt ttcggtgtcg aaggcggcga
     7621 aagcgcgatt gccggtttga actacctgat tcaaaacgcc ggtaaggacg gcgtggaaga
     7681 agtcatcatc ggtatggcgc accgtggccg tctgaatgtt ttggtgaaca ttttgggcaa
     7741 aaaacccggc gatttgtttg ccgaatttga aggccgtgcc gaaatcaaac tgcctagtgg
     7801 cgacgtgaaa taccatatgg gcttcagctc cgatattgcc acccctcacg gtccgatgca
     7861 cgtttctttg gcgttcaacc cgtcacactt ggaaatcgtc aatccggtag tggaaggttc
     7921 tgcacgcgcc aaacaaaaac gtttgggcga aaacggccgc gataaagtct tgccggtatt
     7981 gattcacggc gattccgcat ttatcggttt gggtgtcaac caagcaacat tcaacctgtc
     8041 taaaacgcgc ggttatacca caggcggtac ggtccatatc gtcatcaaca accaaatcgg
     8101 ctttaccact tccgatatcc gcgatacccg ttcaaccgta cactgtaccg atatcgcaaa
     8161 aatggtttcc gctccggtta tccatgtgaa cggcgatgat cccgaacgcg tttgctttgc
     8221 cattcaagcc gctttggatt accgcaaaaa attccataaa gacatcgtaa tcgacgttgt
     8281 ctgctaccgt aaatggggtc acaacgaggg cgatgatccg actttgaccc aaccgatgat
     8341 gtacaaaaaa gtatcgcaac atccgggtgc gcgtgctttg tacaccgagc aactgattgc
     8401 cgaaggcgtg gtaactcaag ttgaggccga cggttacatc caagcctacc gtgatgcttt
     8461 ggacaaaggc gaacatgttg agcaaacaac gttgagcaac ttccaacgca cacaaatcga
     8521 ctggagcaaa taccaaggta aagattggcg cgaaaaaatc gaaaccggtt tgcctgccgc
     8581 cgacattgag cgtcttactg agaaattcac cgctgtgccg gaaggctttg ccctgcatcc
     8641 gactgcaaaa cgtgtgatcg aagcgcgtaa agccatggca tccggcaaac aagccatcga
     8701 ctggggtatg gccgaaaccc tcgcatacgc aagcctgctg accaaaggtc atggcgtgcg
     8761 tatctccggt gaggactccg gccgcggtac attctcacac cgtcatgccg ttctgcacga
     8821 tcaaaaacgc gaaaaatggg acgacggtac ttatgttcct cttcgcaaca tgggcgaagg
     8881 cttgggcgag ttcctggtta tcgactctat cttgaacgaa gaagccgtga tggcgttcga
     8941 gtacggcttt gcctgctccg ctcctgacaa gctgaccatt tgggaagctc aattcggtga
     9001 cttcgccaac ggcgcgcaag taactattga tcaattcctg tcttcaggcg aaaccaagtg
     9061 gggtcgcttg tgcggtctga ccaccatcct gccgcacggc tacgacggtc aaggccctga
     9121 acactcttct gcacgcgtag aacgttggtt gcaactgtgt tctgagaaca atatgcaagt
     9181 catcatgccg tctgaagcgt cgcaaatgtt ccatctcttg caacgccaag tcttgggttc
     9241 ataccgcaaa ccgctggtga ttttcatgtc caaacgcctg ttgcgcttca aaggtgcaat
     9301 gagcccgctg gaaaacttca ccgaaggttc gactttccgt ccggttattg gtgataccgc
     9361 cgaacgcgca agcaacgaca gcgtgaaacg cgtggtattg tgtgccggtc aggtttacta
     9421 tgacttggaa gccggtcgag ccgaacgtaa actggaagat gatgtcgcta tcgtccgcgt
     9481 tgagcagctg tatccgttcc catacgacga ggttaaagcc gaactggcga aatatccgaa
     9541 cgcaaaatct gtggtttggg cgcaagaaga gccgaaaaac caaggcgcgt tctaccaaat
     9601 ccgccaccgc atcgaagacg ttatcagcga agagcaaaaa ctgtcttatg tcggccgtcc
     9661 aagcagcgca tcgcctgcag tgggctactc aagcaaacac attgctcaat tgaaacaatt
     9721 ggttgaagac gctttggcgt tataaaccaa gtagcattcc gtctgagtct gctcaggcgg
     9781 aatgcccata tgcagaatta aaaacacaca acaggccgtc tgaaagggcc attggagaca
     9841 caaaatgatt attgatgtaa aagtacctat gctgtctgaa agcgtatctg aaggcacact
     9901 cttggaatgg aagaaaaaag ttggcgaagc agttgcccgt gacgaaatcc tgatcgatat
     9961 cgaaacggac aaagtggttt tggaagtacc ttctccacaa gccggcgtat tggttgaaat
    10021 cgtagcgcaa gacggtgaaa ccgttgttgc cgaccaagtt ttggcccgta tcgatacagc
    10081 tgctactgtc gctgctgaag cacctgcagc cgctcctgcc gaagctgccc cggctgccgt
    10141 tcctgctgct gcacaaaaca acgccgccat gcctgccgct gcaaaactgg ctgccgagac
    10201 cggtgttgac gtgaacgtat tgcaaggttc cggccgtgac ggtcgcgtat tgaaagaaga
    10261 cgtacaaaat gccgctgcca aacctgccgc agccgtggcc cctgccgttg cacttcctgc
    10321 cggcgcacgt cctgaagaac gcgtaccaat gagccgcctg cgtgcccgtg ttgcagaacg
    10381 cctcttggct tctcaacaag aaaacgccat tctgactaca ttcaacgaag tcaacatgaa
    10441 accgatcatg gacttgcgtg cgaagtacaa agaaaaattc gagaaagaac acggcgtaaa
    10501 actgggcttt atgtccttct tcgttaaagc cgctgttgcc gccctgaaaa aatacccggt
    10561 tgtgaatgct tctgttgacg gcaaagacat tgtgtaccac ggctacttcg acatcggtat
    10621 cgcaattggc agcccacgcg gtttggttgt accaatcctg cgcgatgccg accaaatgag
    10681 cattgccgac atcgaacaag caattgttga ttacgcgaaa aaagccaaag acggcaaaat
    10741 cgctatcgaa gacctgaccg gcggtacatt cagtattacc aacggcggta ctttcggttc
    10801 tatgatgtcc accccgatca tcaacccgcc tcaatctgcg attttgggta tgcatgccac
    10861 taaagagcgc gctgtggttg aaaacggcca agttgttgtc cgtccaatga tgtatctggc
    10921 tctgtcttac gaccaccgta tcattgacgg ccgcgaagct gtattgacct tggtagccat
    10981 taaagacgcg ttggaagacc cggtccgcct gttgttggat ctgtaatcgt ttcagacggc
    11041 tttttatttg ttaatgaaaa ggccgtctga atttttattt agatgtagcg taatgtagta
    11101 tcgtgctaca ataggctcaa cgaacgattg aggccgtctg aaacatttga ttcgaatgaa
    11161 tcggcagata tggactttca gacggctttt tcttaaaacc atcaaaacgc agtcattcaa
    11221 aataaaaaaa gaaacgaaaa gtatcgtttt tattttgaga tactgctaaa agcaaaggat
    11281 gacacgatgt ctcaatatga tgtagtagtg attggtgcag gtccgggcgg atacgttgcc
    11341 gccatccgtg ccgcacaact gggtttcaaa actgcctgtg tcgatgcagg cgttaacaaa
    11401 gcaggcaatg cccctgcatt gggcggtact tgcttgaacg taggctgtat cccttctaaa
    11461 gccctgttgc aatccagcga acatttccac gctgcgcaac acgattttgc cgaacacggt
    11521 atcactgtcg gcgacgtaaa atttgacgtg gccaaaatga ttgagcgcaa agatgccatc
    11581 gtgaccaaac tgaccggcgg cgtgaaattc ctgttccaaa aaaacaaagt aaccagcctg
    11641 ttcggtactg cttcctttgc cggtaaaaat ggcgatgctt accaaattga agtcgataac
    11701 aaaggcgaga aaaccgttat cgaagccaaa cacgtcatcg tagcaaccgg ttccgtaccg
    11761 cgtccgttgc cgcaagtcgc tatcgacaac gtgaacgtat tggacaacga aggcgcattg
    11821 aacctgaccg aagtacctgc caaactcggc gtaatcggtt ccggtgtgat tggtttggaa
    11881 atgggttccg tatggaaccg cgtgggtgcg gaagttacca ttcttgaagc cgcgccgacc
    11941 ttcctggctg ccgccgacca acaaatcgcc aaagaagcct tcaaatactt caccaaagag
    12001 caaggtctga gcatcgaatt gggtgtgaaa atcggcgaca tcaagtctga aggcaaaggt
    12061 gtttccgttg cttacgaaac tgctgccggc gaagccaaaa ccgaagtatt cgacaaactg
    12121 atcgttgcca tcggccgtat tccaaacacc aaaggcctga acgctgaagc cgtaggcttg
    12181 gaaaaagacg agcgcggctt tatcaaagtg gatggcgaat gccgtaccaa cctgcctaac
    12241 gtatgggcaa tcggcgacgt ggttcgcggc ccgatgttgg cacacaaagc cagcgacgaa
    12301 ggcgttgccg ttgccgagcg cattgccggt caaaaaccgc atatcgactt caacaacgta
    12361 ccgtttgtga tttacaccga ccctgaaatc gcttgggtgg gtaaaaccga agagcagctc
    12421 aaagccgaag gcgtggagta caaaaaaggt acttcaggtt tcggtgcaaa cggccgtgca
    12481 ttggcaatgg gcaaagccaa aggtacggtt aaagtgttgg cagatgccaa aaccgaccgt
    12541 atcttgggcg tacacatgat cggcccggtt gtcagcgaat tggttaccga aggcgtgact
    12601 gcgctcgaat tcttcgccag cagcgaagat atcgcccgta ttatccatgc ccacccaacc
    12661 ttgtccgaag tggttcacga agctgcattg gcggccgaca aacgcgcttt gcacggttga
    12721 tagacattaa ggccgtctga aattttcaga cggccttaag gcctccggca aattgaatgt
    12781 tccgagagct tcgttttctg atttataatt ccgtcagaca aacagcattt acattcatta
    12841 tgaacaaaga aatagtcggt attttcttta taccgatggg catcatcagc atgtgtatgg
    12901 ctgcattgtg gcagatgtat gtgatgatga ccgaaactta tacgctcaac cgtttcaaag
    12961 ataaagaatt ggtttggcgc gtggcattgt tgtttatcag tttcagcctt gccgtttatc
    13021 tgctctgtcc gaattcgcgt aaaaaaggca tcgtcttttt tattctcggg ggaggcggtg
    13081 cagtcatgta tctgctggcg cggatgtggt tgcccttcag taaatagtag gaccgtctga
    13141 aaatatggga ttggccgcag ggcgattcct aaaacccact caccttaagg agaaatccat
    13201 gaatttacac gagtatcagg ctaaagaact gctggctagc tacggtttgc ccgtacaagg
    13261 cggtattttg gcgcacaacg gcgaagaagc cgctgcagct tacgacaaat tgggcggcaa
    13321 attcgctgtt gtcaaagcac aggtacacgc cggcggccgc ggtaaagcgg gcggcgtaaa
    13381 agtcgttaaa agccgcgaaa aagccaaaga agtggctgaa agcctgattg gcaccaactt
    13441 ggtaacttac caaaccgatg ccaacggcca acctgtcaac agcgttttgg tttgcgaaga
    13501 catgtaccct gttcaaaccg agctgtactt gggcgcagtg gttgaccgtt ctacccgccg
    13561 cgttacattc atggcttcta ccgaaggcgg cgtggaaatc gaaaaagttg ctgctgaaac
    13621 tccagaaaaa atcttcaaag taaccgttga tccgctggtc ggcctgcaac cttgccaagc
    13681 tcgcgaagtt gccttccaac tgggcttgaa agacaaacaa atcaacgagt tcgccaaact
    13741 gatgaccggc gcgtacaaag cgtttgtcga aaacgacttc gccctgtttg aagtcaaccc
    13801 gctggcagtt cgcgaaaacg gcgcactggc ttgcgtggac ggcaaaatcg gcatcgacag
    13861 caacgcgctc taccgcctgc caaaaatcgc tgaattgcgc gacaaatctc aagaaaacga
    13921 acgtgaactg aaagcttctg aattcgacct gaactatgtt gccctggaag gtaatatcgg
    13981 ctgtatggtt aacggtgccg gtttggcgat ggccaccatg gacatcatca aactcaaagg
    14041 cggccaacct gccaacttct tggacgttgg cggcggcgca accaaagacc gcgtggttga
    14101 agcgttcaaa ctgattttgg aagacaaatc cgttaaaggc gtattgatca acatcttcgg
    14161 cggtatcgta cgttgcgaca tgattgcgga agccatcgtg gcagccgtta aagaaatcaa
    14221 cgtcaacgtt cctgtcgttg ttcgtttgga aggcaacaac gccgaactcg gcgcgaaaat
    14281 cctgaacgaa tcaggtctga aactgacttc tgcagacggt ctgaatgacg cagccgaaaa
    14341 aattgttgca gccgtaaacg cctaaggaga aaagaatgag cgtattgatt aataaagaca
    14401 ctaaagtatt ggttcaaggt ttcaccggta aaaacggtac tttccactcc gaacaagctc
    14461 tggcttacgg cactaaagtt gtcggcggcg ttaccccagg caaaggcggt caaacccacc
    14521 tagacctgcc tgtattcaac accatgaaag aagccgttaa agaaaccggc gctgacgcat
    14581 ccgtgattta cgttcccgct ccgtttgtgt tggattctat cgttgaagcc gttgattcag
    14641 gcgtaggctt ggtcgttgtg attaccgaag gcgttccaac tctggacatg ctcaaagcca
    14701 aacgttactt ggaaaccaac ggcaacggta cccgcttggt cggccctaac tgcccgggcg
    14761 tgattactcc gggcgagtgc aaaatcggca ttatgccggg ccacatccac actccgggcc
    14821 gcatcggtat tatttcccgt tccggtacat tgacttacga agccgtggca caaaccacca
    14881 acctgggctt gggtcaatca acctgtatcg gtatcggcgg cgacccgatt cctggtatga
    14941 accaaatcga cgcactgaaa ctcttccaag aagacccaga taccgatgcc atcatcatga
    15001 ttggtgaaat cggtggtact gcggaagaag aagcagccga atacatccaa tccaacgtaa
    15061 ccaaacctgt tgtcggttac atcaccggtg ttaccgctcc taaaggcaaa cgcatgggcc
    15121 acgccggtgc gattatctcc ggcggtaaag gtactgccga agaaaaattc gccgcgtttg
    15181 aaaaagccgg tatcgcctac acccgcagcc ctgccgagtt gggcacgacg atgctggaag
    15241 tgttgaaagc aaaaggtttg gcataatcag gtttgacaac tgattgaaca tcaaatgccg
    15301 tctgaaaccg gaaatcgggt ttcagacggc attttgtttg tcatttcaaa aagaggcagc
    15361 ctcaacatac tcacattatt tttgcccttt gaggcagtca gaatatagtg gattaaaaac
    15421 aaaatagtac aacactcgac gttgaaggtt taaccatggc atactctgcg gacttaagaa
    15481 acaaagcttt aaaccatagc ggattaacaa aaatcaggac aaggcggcgg gccgcagacg
    15541 gtacaaatgg tacggaaccg atccgcccgg cgctccatca ccttagggaa tcgttccctt
    15601 tgggccgggg cggggcaacg ccgtaccggt ttttgttaat tcgctataca gcaggcgttg
    15661 gtggaaatcc cgaataagcg gttcaaaacg tgtcgctgcc gcggcagcca tatacagcgc
    15721 cttacgcacc gcagaccttc cgccgaagca gcggcttttg aatttggttt ccccgctctc
    15781 cctcgggtgc ggggcaatgc cgaccaaacc cgctatccgt ttgtgcgaca gccgccccaa
    15841 ttcgggcagc atcgccatca gcgtagccgt cgttatcgaa ccgatgcctt tgatttgctc
    15901 cgccacttgg gctttgccgt caaaatgcgt gcgggtgtgg ttgtcgattt gtttgtccga
    15961 ttcgtcaatc agccggtcaa aacgggcaat cagttgtttg acgctttcga cttgcgtttc
    16021 gtgaacctga tgcagacatt ttgtaatagc tgccattacg cctactagga tatatacctt
    16081 ctatatatag tgaattaaca aaaaccggta cggcgttgcc ccgccccggc ccaaagggaa
    16141 cgattcccta aggtaatgaa gc
//
LOCUS       DAXFZM010000057        15748 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.057, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000057 DAXFZM010000000
VERSION     DAXFZM010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 15748)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15748)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15748
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.057"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(302..724)
                     /locus_tag="ACFJAG_001432"
     CDS             complement(302..724)
                     /locus_tag="ACFJAG_001432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HFC3980695.1"
                     /translation="MQVTSKWIDGMCFVGTAEGGHSVVMEGSAAEGAAKRGPSPLEML
                     LLGVAGCSSIDVVMIAEKQRQKVTDCRATVTAKRADDAPRVFTEIHIHFKVIGHDLKE
                     SAIERAVQMSAEKYCSASIMLGKAAKITHSFEIAGAEK"
     gene            complement(842..1513)
                     /locus_tag="ACFJAG_001433"
     CDS             complement(842..1513)
                     /locus_tag="ACFJAG_001433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3108 domain-containing protein"
                     /protein_id="HFC3980696.1"
                     /translation="MMKTFKNIFSAAILSAALPCAYAARLPQSAVLHYSGSYGIPATM
                     TFERSGNAYKIVSTIKVPLYNIRFESGGTVVGNTLHPAYYKDIRRGKLYAEAKFADGS
                     VTYGKAGESKTEQSPKAMDLFTLAWQLAANDAKLPPGLKITNGKKLYSVGGLNKAGTG
                     KYSIGGVETEVVKYRVRRGDDTVTYFFAPSLNNIPAQIGYTDDGKTYTLKLKSVQING
                     QAAKP"
     gene            complement(1529..2155)
                     /gene="purN"
                     /locus_tag="ACFJAG_001434"
     CDS             complement(1529..2155)
                     /gene="purN"
                     /locus_tag="ACFJAG_001434"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004644 - phosphoribosylglycinamide
                     formyltransferase activity [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HFC3980697.1"
                     /translation="MKNIVILISGRGSNMQAIVNAAIPNVRIAAVLSNSETAAGLQWA
                     AERGIPTDSLNHKNFESRLAFDTAMMEKIDAYQPDLVVLAGFMRILTPEFCAHYEGRL
                     MNIHPSILPSFTGLHTHERALEAGCRVAGCTIHFVTAELDCGQIVSQGIVPILDGDTA
                     DDVAARVLAVEHKLYPKAVADFAAGRLIIEGNRVRNSENADAARFLTA"
     gene            complement(2262..3080)
                     /locus_tag="ACFJAG_001435"
     CDS             complement(2262..3080)
                     /locus_tag="ACFJAG_001435"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HFC3980698.1"
                     /translation="MNTIFKISALTLSAALALSACGKKEAAPASASEPAAASAAQGDT
                     SSIGGTMQQASYAMGVDIGRSLKQMKEQGAEIDLKVFTDAMQAVYDGKEIKMTEEQAQ
                     EVMMKFLQEQQAKAVEKHKADAKANKEKGEAFLKENAAKDGVKTTASGLQYKITKQGK
                     GKQPTKDDIVTVEYEGRLIDGTVFDSSKANGGPATFPLSQVIPGWTEGVRLLKEGGEA
                     TFYIPSNLAYREQGAGEKIGPNATLVFDVKLVKIGAPENAPAKQPDQVDIKKVN"
     gene            complement(3340..3780)
                     /locus_tag="ACFJAG_001436"
     CDS             complement(3340..3780)
                     /locus_tag="ACFJAG_001436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit chi"
                     /protein_id="HFC3980699.1"
                     /translation="MPKVTFYTHVDQIPLFTCRLIARAIRDGGRILVWSDSFGRLQEL
                     DKMLWQYEAESFIPHEIWETEEAMPSDTSVLLACGGNLPRIPEGMAVLNLSDGFWNTA
                     SVLPARVLEIVGNSLEDLADARERFTAYRRSGFAIEHHGMEGKA"
     gene            complement(3843..5249)
                     /locus_tag="ACFJAG_001437"
     CDS             complement(3843..5249)
                     /locus_tag="ACFJAG_001437"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0019538 - protein metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HFC3980700.1"
                     /translation="MEFSTKTEILQEQQAGAQLFVCADKAPEHNTAAHALFSALEEGQ
                     NFSDTKIPTDNGLQAVAVVRLEKTDRAALNKAAAEAAKWAQNQETVNVDVHAFDEAQA
                     AAVAEAFAIAFGNAAYRFDRYKKEAKPAKFSQAVFHSAHEAAVKEALRVAEAQVYGQS
                     LCRDLGNAAPNECTPEFLARTAKAEAEKLGAHAKIIEKDYIKENMGSFWSVAKGSVED
                     PYLVELSYFGAADKEAAPVVLVGKGITFDTGGISLKPGLNMDEMKFDMCGAATVISTF
                     CAAVKLQLPINLIAIVATCENMPSGAANKPGDVVKSMKGLTIEVLNTDAEGRLILCDA
                     LTYAEQFKPKAVIDVATLTGACIVALGHDVSGVMGNNQDLIDSLLAASYNVDDKAWQL
                     PLFETYKDQLKSNFADIPNIGTPGAGTITAATFLSYFTEGYPWAHLDIAGTAWKSGAE
                     KGATGRPVPLLMNYLRNL"
     gene            complement(5252..5434)
                     /locus_tag="ACFJAG_001438"
     CDS             complement(5252..5434)
                     /locus_tag="ACFJAG_001438"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980701.1"
                     /translation="MINHKIAVRGAVSGSAQADCPRKVSDGASKNGVQSCQPSSDGLL
                     SERPSENYRQPSQSGE"
     gene            5423..6538
                     /gene="lptF"
                     /locus_tag="ACFJAG_001439"
     CDS             5423..6538
                     /gene="lptF"
                     /locus_tag="ACFJAG_001439"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptF"
                     /protein_id="HFC3980702.1"
                     /translation="MIYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVA
                     IDAVLALVGFWVIGMTPLLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPV
                     MQFAVPFAILIAVMQLWVIPWAELRSREYAEILKQKQELSLVEAGEFNNLGKRNGRVY
                     FVETFDTESGIMKNLFLREQDKNGGDNIIFTKEGNFSLNDNKRTLELRHGYRYSGTPG
                     RADYNQVSFQKLNLIISTTPKLIDPVSHRRTISTAQLIGSSNPQHQAELMWRISLTVS
                     VLLLCLLAVPLSYFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLP
                     MHIIMFVIAIVLLRVRSMPSQPFWQAVGKSLTLKGGK"
     gene            6535..7605
                     /gene="lptG"
                     /locus_tag="ACFJAG_001440"
     CDS             6535..7605
                     /gene="lptG"
                     /locus_tag="ACFJAG_001440"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptG"
                     /protein_id="HFC3980703.1"
                     /translation="MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGKGSY
                     GIWEMLGYTALKMPARAYELMPLAVLIGGLASLSQLAAGSELAVIKASGMSTKKLLLI
                     LSQFGFIFAIAAVALGEWVAPTLSQKAENIKAAAINGKISTGHTGLWLKEKNSIINVR
                     GMLPDHTLLGIKIWARNDKNELAEAVEADSAVLNSDGSWQLKNIRRSIMGTDKIETSA
                     AAEETWPIAVRRNLMDVLLVKPDQMSVGELTTYIRHLQNNSQNTQIYAIAWWRKLVYP
                     VAAWVMALVAFAFTPQTTRHGNMGLKLFGGICLGLLFHLAGRLFGFTSQLYGTPPFFA
                     GALPTIAFALLAVWLIRKQEKR"
     gene            7610..7771
                     /locus_tag="ACFJAG_001441"
     CDS             7610..7771
                     /locus_tag="ACFJAG_001441"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980704.1"
                     /translation="MPSEPLFRRHLFSLTHSRRHIAVPYYSGLNLNRYGVASPCRTIF
                     TVCGFAALS"
     gene            7920..10505
                     /gene="acnB"
                     /locus_tag="ACFJAG_001442"
     CDS             7920..10505
                     /gene="acnB"
                     /locus_tag="ACFJAG_001442"
                     /EC_number="4.2.1.3"
                     /EC_number="4.2.1.99"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0003994 - aconitate hydratase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aconitate hydratase
                     2/2-methylisocitrate dehydratase"
                     /protein_id="HFC3980705.1"
                     /translation="MLEAYRKAAAERAALGIPALPLNAQQTADLVELLKNPPAGEGEF
                     LVELLAHRVPPGVDDAAKVKASFLAAVAEGSASSPLVSPKYATELLGTMLGGYNIHAL
                     IELLDDDKLAPIAAKGLKHTLLMFDSFHDVQEKAEKGNKYAQEVLQSWADAEWFASRA
                     KVPEKITVTVFKVDGETNTDDLSPAPDAWSRPDIPLHALAMLKNPRDGITPDKPGEVG
                     PIKLLEELKAKGHPVAYVGDVVGTGSSRKSATNSVIWHTGEDIPFVPNKRFGGVCLGG
                     KIAPIFFNTQEDSGALPIEVDVSALKMGDVVNILPYEGKIVKNGETVAEFELKSQVLL
                     DEVQAGGRINLIIGRGLTAKAREALKLPASTAFRLPQAPAESKVGFTLAQKMVGRACG
                     LPEGQGVRPGTYCEPRMTTVGSQDTTGPMTRDELKDLACLGFSADMVMQSFCHTAAYP
                     KPVDVKTHKELPAFISTRGGVSLRPGDGVIHSWLNRLLLPDTVGTGGDSHTRFPIGIS
                     FPAGSGLVAFAAATGVIPLDMPESVLVRFSGKLQPGVTLRDLVNAIPLYAIKQGLLTV
                     AKAGKKNIFSGRILEIEGLPDLKVEQAFELTDASAERSAAGCTVKLNKEPIIEYMKSN
                     VVLMKNMIANGYQDPRALERRIKAMEKWLANPELLEADKDAEYAAVIEINMDDIKEPI
                     IACPNDPDDVCFMSERSGTKIDEVFIGSCMTNIGHFRAASKLLEGKSDIPVRLWVAPP
                     TKMDAKELSDEGHYGVLGRAGARMEMPGCSLCMGNQAQVREGATVMSTSTRNFPNRLG
                     KNTFVYLGSAELAAICSKLGKIPTVEEYQANIGIINEQGDKIYRYMNFNEIDSYNEVA
                     ETVNV"
     gene            10647..11642
                     /locus_tag="ACFJAG_001443"
     CDS             10647..11642
                     /locus_tag="ACFJAG_001443"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004585 - ornithine carbamoyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0016597 - amino acid binding [Evidence
                     IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006591 - ornithine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HFC3980706.1"
                     /translation="MNLKNRHFLKLLDFTPEEITTYLDLAAELKDAKKAGREIQRMKG
                     KNIALIFEKTSTRTRCAFEVAARDQGADATYLEPSASQIGHKESIKDTARVLGRMYDA
                     IEYRGFAQETVEELAKYAGVPVFNGLTNEFHPTQMLADALTMREHSGKPLNQTAFAYV
                     GDARYNMGNSLLILGAKLGMDVRIGAPQSLWPSEGIIAAAHAAAKETGAKITLTENAH
                     EAVKGVGFIHTDVWVSMGEPKEVWQERIDLLKDYRVTPELMAASGNPQVKFMHCLPAF
                     HNRETKVGEWIYETFGLNGVEVTEEVFESPAGIVFDQAENRMHTIKAVMVAALGD"
     gene            complement(11761..12774)
                     /gene="ilvC"
                     /locus_tag="ACFJAG_001444"
     CDS             complement(11761..12774)
                     /gene="ilvC"
                     /locus_tag="ACFJAG_001444"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011239815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HFC3980707.1"
                     /translation="MQVYYDKDADLSLIKGKTVAIIGYGSQGHAHAANLKDSGVNVVI
                     GLRHGSSWKKAEAAGHVVKTVAEATKEADVVMLLLPDETMPAVYHAEVAANLKEGATL
                     AFAHGFNVHYNQIVPRADLDVIMVAPKGPGHTVRSEYKRGGGVPSLIAVYQDNSGKAK
                     DIALSYAAANGGTKGGVIETTFREETETDLFGEQAVLCGGVAELIKAGFETLTEAGYA
                     PEMAYFECLHEMKLIVDLIFEGGIANMNYSISNNAEYGEYVTGPEVVNASSKEAMRNA
                     LKRIQTGEYAKMFIQEGNVNYASMTARRRLNADHQVEKVGARLRAMMPWITANKLVDQ
                     DKN"
     gene            complement(12854..13147)
                     /locus_tag="ACFJAG_001445"
     CDS             complement(12854..13147)
                     /locus_tag="ACFJAG_001445"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003779360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative quinol monooxygenase"
                     /protein_id="HFC3980708.1"
                     /translation="MSNIKIVALVTVKPEYTETLAAQFKELVKASRAEEGNISYNLHQ
                     EIGKPNRFVFVENWKSQAAIDEHNASAHFQAFVQSVDGKTEALEIVLMNEVAV"
     gene            complement(13214..13705)
                     /gene="ilvN"
                     /locus_tag="ACFJAG_001446"
     CDS             complement(13214..13705)
                     /gene="ilvN"
                     /locus_tag="ACFJAG_001446"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1990610 - acetolactate synthase regulator
                     activity [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HFC3980709.1"
                     /translation="MRHILSVLIENESGAMSRVVGLFSARDYNIDSLAVAPTEDKTLS
                     RMTIVTHGDEQVIEQITKQLNKLIEVIKVVDLNESRFVERELMLVKVRAAGKDRDEFL
                     RLTEIYRGSIIDVTDRSYTIEITGSTDKLDSFLETVGRAQILETVRTGAAGIGRGERI
                     LKI"
     gene            complement(13716..15443)
                     /gene="ilvB"
                     /locus_tag="ACFJAG_001447"
     CDS             complement(13716..15443)
                     /gene="ilvB"
                     /locus_tag="ACFJAG_001447"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003984 - acetolactate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic-type acetolactate synthase large
                     subunit"
                     /protein_id="HFC3980710.1"
                     /translation="MQLSGAQIIVQSLKAEGVEYVFGYPGGAVIEIYDALFQLNKFKH
                     ILTRHEQAAVHAADAYARVSGKVGVALVTSGPGVTNALTGIATAYTDSIPMVVISGQV
                     GNSLIGTDAFQEVDTVGITRPCVKHNFLVTDINELVETIKKAFQIAASGRPGPVVLDV
                     PKDVTQAMAKFSYPQEDIFIRSYQPVVQGHIGQIKKAVQMLASAKRPVVYFGGGVVLG
                     NASEELTRFVRMTGAPCTGTLMGLGAYPSGDRQFLGMLGMHGTYEANLAMQNADVVLA
                     VGARFDDRVVSVPSKFFEKAKKVIHIDVDPSSIAKRVKADIPIVGDVKNILSEMVALW
                     QKQESVPSEDALGKWWKTIEEWRSRDCLWFDNGSEIIKPQYVIQKLAEITGNSAIITS
                     DVGQHQMFAAQYYPFERPRQWLNSGGLGTMGVGLPYAIGAKLAAPDQDVFCITGDGSI
                     QMNIQELSTCFQYRIPVNVITLNNGYLGMVRQWQEIYYGGRESETYFDSLPDFVKLAE
                     AYGHIGIRVDNKSDVEGALLEALNQKDRLVFIDFLTDQKQNVMPMVGNGKGLDEMVLP
                     PHMRTDGKA"
BASE COUNT         3646 a         4331 c         4021 g         3750 t
ORIGIN      
        1 taatatatgg cttaaaataa cgggattccc gccttccgcc cgcccgcaaa atcaggcggg
       61 catcatttta aaacgcggca tttaaaattt gaccgaaaat tgttgacaat ccggaatcaa
      121 gcctgcacaa taccccgaca agtccaagta ttataaaggc tgaataaaga ggaaacagca
      181 ggcagatata ttcgggaggt gcagtccgaa tatatctgct tttctatgcg cctccggatt
      241 gcctgccgca cctttcccct tcagacggca tcagccgttt ccccataatg ccgcccgatg
      301 cctatttctc cgccccggca atttcaaaac tgtgggtaat ctttgccgct ttgcccaaca
      361 taatcgaagc cgaacagtat ttttcggcag acatctgaac ggcgcgctca atggccgatt
      421 ctttcaaatc atgcccgatt accttgaaat ggatgtggat ttcggtaaac acgcgcggcg
      481 catcgtccgc ccgtttcgcc gtaaccgtcg cacggcagtc agtcactttc tgacgctgtt
      541 tttcggcaat catcaccaca tcgatgctcg aacagcccgc cacccccaac agcagcattt
      601 ccaaagggct gggcccgcgc ttggccgcgc cttctgccgc cgatccctcc ataacgacgc
      661 tgtgcccgcc ttccgccgtg ccgacaaaac acattccgtc tatccatttt gatgtaacct
      721 gcatggtgtc attcccgaaa atagcgttaa aaccgctttg catatggcgt tattgtaaac
      781 aatttcaagc ggcttataca gaaatatgga caaaacggca aaaaaccgcc tgaaaaccga
      841 tttacggttt ggcggcctgt ccgttgatct gcaccgattt gagcttcagc gtataggttt
      901 tgccgtcgtc ggtatagccg atttgtgccg gaatattgtt cagggacggt gcgaagaaat
      961 acgttaccgt atcgtcgccg cgccgcaccc gatatttgac gacttcggtt tccacgccgc
     1021 ctatgctgta ttttcccgta cccgccttat tcaggccgcc gacggaataa agttttttgc
     1081 cgttggtgat tttcagaccc ggggggagtt tcgcgtcatt tgccgccaac tgccaggcaa
     1141 gcgtgaacaa atccatagcc ttggggcttt gctcggtttt gctctcgccc gctttgccgt
     1201 aggttacgct gccgtcggcg aatttggctt ccgcatacag tttgcccctg cgtatgtctt
     1261 tatagtaggc agggtgcagg gtattgccga caaccgtacc gccggactcg aaacggatat
     1321 tgtatagcgg cactttaatc gtcgaaacga ttttgtaagc attgccgctg cgttcaaatg
     1381 tcatcgtggc gggaatgccg tagctgccgg aatagtgcag cacggcggat tggggtagcc
     1441 ttgccgcata cgcgcacggc agggcggcgg acaaaatggc ggcggaaaat atatttttaa
     1501 aagtcttcat catttgctcc cgcccggttt acgccgtcag gaaacgggcg gcatcggcgt
     1561 tttccgaatt tctgacacgg tttccctcga taatcaggcg gccggcggca aaatcggcaa
     1621 cggctttcgg atagagtttg tgttcgacag ccaaaacccg ggcggcaaca tcgtctgccg
     1681 tatcgccgtc aagtatcggc acaatccctt gcgatacaat ctggccgcaa tccagctcgg
     1741 ccgtaacgaa atgaatcgta cagccggcaa cgcggcaacc tgcttccaaa gcgcgttcgt
     1801 gcgtatgaag cccggtgaac gagggcagga tggacggatg gatgttcatc agcctgcctt
     1861 cgtaatgggc gcagaactca ggggtcagaa tccgcataaa acctgccaaa accaccaaat
     1921 cgggttgata tgcgtcgatt ttttccatca tggccgtatc gaaggcaagt cgtgattcaa
     1981 agtttttatg attcaggctg tcggtcggga tgccgcgttc ggccgcccat tgcaaaccgg
     2041 cagccgtttc gctgttgctc aacacggcgg caatgcggac gttgggaatg gcggcattga
     2101 cgattgcctg catattgctg ccgcgtccgg aaatcaggat gacgatgttt ttcataatgg
     2161 tgcgcttttg aaagggatgc cgtctgaacc gctgtttggt ggcttcagac ggcatttgcc
     2221 gtaaaaatgc ccgaaaacct gtttcgggca tggattcgga cttaatttac ttttttgatg
     2281 tcgacttgat ccggctgctt ggcgggcgcg ttttcgggtg cgccgatttt gaccagtttc
     2341 acgtcaaata ccaaagtggc gttcggaccg attttttcgc ccgcaccctg ttcgcggtag
     2401 gcaaggttgg acgggatgta gaacgtggct tcgccgcctt ctttcagaag ccgtacgcct
     2461 tcggtccaac ccggaatcac ttggctcaaa gggaaggtgg ccgggccgcc gttggctttg
     2521 ctgctgtcga atacggtacc gtcaatcagg cggccttcgt attccacggt aacgatgtcg
     2581 tcttttgtcg gctgtttgcc tttaccctgt ttggtgattt tgtactgcag accggaagca
     2641 gtggtcttca cgccgtcttt ggcggcattt tccttcagga aggcttcgcc tttttctttg
     2701 ttggccttcg catccgcctt gtgtttttct acggctttag cctgctgctc ctgcaggaat
     2761 ttcatcatca cttcctgggc ctgctcttcg gtcattttga tttctttgcc gtcatacact
     2821 gcctgcatgg catcggtaaa gactttcaaa tcgatttccg cgccctgttc cttcatttgt
     2881 ttcagggagc gtccgatgtc cacgcccatc gcatagcttg cctgctgcat cgtgccgccg
     2941 attgaagagg tgtcgccctg cgcggcagaa gcggcggcag gttcggatgc agatgcgggg
     3001 gcggcttctt ttttgccgca ggcggaaagc gccaaagcgg cggaaagggt cagtgcgctg
     3061 attttgaaaa tggtgttcat gatggatctt cgctgtcgat aaagtcggaa aaacgggatt
     3121 atagccgagt ttgaatgttt caacacacag gatggcacat aaagcgtcaa tctgtgtgtt
     3181 gccctgtttt ggaagggatt gaaccttcca aaataaggtt tgattctacc gccccgaagg
     3241 acagatgtcc aagtggcggg gttcaaccga taaggaaatt ttaatcaaat agaatcaagc
     3301 ctgtttaaat tttgtaaatg cggcatttca gacggcattt catgccttgc cctccatgcc
     3361 gtgatgttcg atggcaaaac cgcttcggcg gtaggcggta aagcgttcgc gcgcgtcggc
     3421 gagatcttcc aggctgttgc cgacgatttc caaaacgcgc gcgggcaaga ccgaagcggt
     3481 gttccaaaaa ccgtcggaca ggttcaaaac ggccatgcct tcgggaattc ggggcagatt
     3541 gccgccgcag gcaagcagga cggatgtgtc agacggcatg gcttcttccg tttcccaaat
     3601 ttcgtgcgga ataaaactct cggcctcgta ttgccaaagc attttgtcca attcctgaag
     3661 ccgcccgaac gagtcggacc acaccagtat cctgccgccg tctcggatag cgcgcgcaat
     3721 caaccgacag gtaaaaaggg ggatttggtc aacatgggta taaaaggtaa ctttcggcat
     3781 attgtttgag catttgacag gatgatgccg tctgaaaagc ttcagacggc attgtggcaa
     3841 aattaaagat tccgcagata gttcatcagc agcggtacgg ggcggccggt cgcacctttt
     3901 tccgctccgg atttccacgc cgtacccgcg atgtcaaggt gcgcccacgg gtagccttcg
     3961 gtgaaatagg acaggaatgt tgcggcggta atcgtgcccg cgccgggcgt gccgatattg
     4021 gggatgtcgg caaagttgga tttgagctgg tctttgtagg tttcaaagag cggcagttgc
     4081 cacgctttgt cgtccacgtt gtaggaagcg gcaagcaggc tgtcgatcaa atcctgatta
     4141 ttgcccatca cgccgctgac atcgtgcccc aaggcgacga tgcacgcgcc ggtcagggtg
     4201 gcgacatcga tgacggcttt gggtttgaac tgctcggcgt aagtgagcgc gtcgcacaaa
     4261 atcagacggc cttcggcatc ggtgttcaac acttcaatcg tcagcccttt catacttttc
     4321 acaacatcgc ccggtttgtt tgccgcaccg gaaggcatgt tttcacaagt ggcgacgatg
     4381 gcaatcagat tgatcggcag ttgcagtttg acggcggcgc agaaggtgct gatgacggtt
     4441 gccgcgccgc acatgtcaaa cttcatttcg tccatgttca ggccgggttt gagggaaatg
     4501 ccgccggtgt cgaaggtaat gcctttgccg accaatacca caggcgcggc ttctttgtcg
     4561 gccgcaccga aatagctcag ttcaaccaaa tatgggtctt cgacgctgcc tttggcaacc
     4621 gaccaaaacg aacccatgtt ttctttgatg tagtcttttt cgatgatttt ggcgtgcgcg
     4681 cccagtttct cggcttcggc tttggcggta cgcgcgagga actcaggcgt gcattcgttc
     4741 ggtgcggcat tgcctaagtc gcggcagagg ctttgtccgt aaacttgtgc ttcggcaacg
     4801 cgcagggctt ctttgacggc ggcttcgtgt gcgctgtgga acacggcttg cgaaaatttg
     4861 gcgggcttgg cttctttttt gtagcggtcg aaacgatatg cagcgttgcc gaacgcgatg
     4921 gcaaaagctt cggcaacggc tgctgcttgc gcctcatcaa aggcgtgaac gtccacattg
     4981 accgtttctt gattttgcgc ccatttggcg gcttcggcgg cggctttgtt cagcgcggcg
     5041 cggtcggttt tttcgaggcg gacgacggcg actgcctgca aaccgttgtc cgtcgggatt
     5101 ttggtgtcgg aaaaattctg accctcttcc aaagcagaga agagcgcatg tgcggcggtg
     5161 ttgtgctcgg gtgctttgtc ggcacagaca aataactgcg cgcctgcctg ctgttcctgc
     5221 aagatttcgg tttttgtgct aaattccacg tttattctcc tgattgagac ggttgtcggt
     5281 agttttcaga cggcctttcg ctcaaaagac cgtctgaaga cggctggcac gattgtaccc
     5341 cattttttga agcaccgtct gaaaccttgc gcggacaatc cgcctgcgcc gaaccgctta
     5401 ccgcccccct gaccgcgatt ttatgattta tcaaagaaac ctcatcaaag aactctcttt
     5461 taccgccgtc ggcattttcg tcgtcctctt ggcggtgttg gtgtccacgc aggcgatcaa
     5521 cctgcttggc cgcgcagctg acgggcgtgt cgccatcgat gccgtgttgg ccttagtcgg
     5581 cttctgggtc atcggtatga ccccgctttt gctggtgttg accgcattca tcagcacgct
     5641 gaccgtattg acccgctact ggcgcgacag cgaaatgtcg gtctggctat cctgcggatt
     5701 ggcgttgaaa cagtggatac gccccgtcat gcagtttgcc gtgccgtttg ccatcctgat
     5761 tgccgtcatg cagctttggg tgataccgtg ggcggaactg cgcagccgcg aatatgccga
     5821 aattttgaag cagaagcagg aattgtcttt ggtggaagcc ggcgagttca ataacttggg
     5881 caagcgcaac ggcagggttt atttcgtcga aacctttgac accgaatccg gcatcatgaa
     5941 aaacctgttc ctgcgcgaac aggacaaaaa cggcggcgac aacatcatct tcaccaaaga
     6001 aggtaacttc tcgctgaacg acaacaaacg cacgctcgaa ttgcgccacg gctaccgtta
     6061 cagcggcacg cccggacgcg ccgactacaa tcaggtttcc ttccaaaaac tcaacctgat
     6121 tatcagcacc acgcccaaac ttatcgaccc cgtttcccac cgccgcacca tttcgaccgc
     6181 ccaactgatt ggcagcagca atccgcaaca tcaggcagaa ttgatgtggc gcatctcgct
     6241 gaccgtcagc gtcctcctgc tctgcctact cgccgtgccg ctttcctatt tcaacccgcg
     6301 cagcggacat acctacaata tcttgattgc catcggtttg tttttaattt accaaaacgg
     6361 gctgaccctg ctttttgaag ccgtggaaga cggcaaaatc catttttggc tcggactgct
     6421 gcctatgcac atcatcatgt tcgtcatcgc aatcgtactt ctgcgcgtcc gcagtatgcc
     6481 cagccagccc ttctggcagg cggttggcaa aagtctgaca ttgaaaggcg gaaaatgaac
     6541 ctgatttcac gttacatcat ccgccaaatg gcggttatgg cggtttacgc gctccttgcc
     6601 ttcctcgctt tgtacagctt ttttgaaatc ctgtacgaaa ccggcaacct cggcaaaggc
     6661 agttacggca tatgggaaat gctgggctac accgccctca aaatgcccgc ccgcgcctac
     6721 gaactcatgc ccctcgccgt cctcatcggc ggactggcct ctctcagcca gcttgccgcc
     6781 ggcagcgaac tggccgtcat caaagccagc ggcatgagca ccaaaaagct gctgttgatt
     6841 ctgtctcagt tcggttttat ttttgctatt gccgccgtcg cgctcggcga atgggttgcg
     6901 cccacgctga gccaaaaagc cgaaaacatc aaagccgccg ccattaacgg caaaatcagc
     6961 accggccata ccggcctttg gctgaaagaa aaaaacagca ttatcaatgt gcgcggaatg
     7021 ttgcccgacc atacgctttt gggcatcaaa atttgggcgc gcaacgataa aaacgaattg
     7081 gcagaggcag tggaagccga ttccgccgtt ttgaacagcg acggcagctg gcagttgaaa
     7141 aacatccgcc gcagcatcat gggtacagac aaaatcgaaa catccgccgc cgccgaagaa
     7201 acttggccga ttgccgtcag acgcaacctg atggacgtat tgctcgtcaa gcccgaccaa
     7261 atgtccgtcg gcgagctgac cacctacatc cgccacctcc aaaacaacag ccaaaacacc
     7321 caaatctacg ccatcgcatg gtggcgtaaa ctcgtttacc ccgtcgccgc atgggtcatg
     7381 gcgctcgttg ccttcgcctt tacgccgcaa accacgcgcc acggcaatat gggcttaaaa
     7441 ctcttcggcg gcatctgtct cggattgctg ttccaccttg ccggcaggct cttcgggttt
     7501 accagccaac tctacggcac cccacccttc ttcgccggcg cactgcctac catagccttc
     7561 gccttgctcg ctgtttggct gatacgcaaa caggaaaaac gttgaacaaa tgccgtccga
     7621 acctctcttc agacggcatt tgttttcatt gacacattcc cgcagacata tagccgttcc
     7681 ctattatagt ggattaaatt taaaccggta cggcgttgcc tcgccttgcc gtactatttt
     7741 tactgtctgc ggcttcgccg ccttgtcctg atttaaattt aatccactat acattacctg
     7801 tcataacagt tccatttttg ttaaaactag tctatgatag cggtacaaat gttgtttaca
     7861 atatttaacg cagatcattt gcaacccgac aaaagaaaaa cggaaaaagg aacaaagaga
     7921 tgttagaagc ctatcgtaaa gccgccgccg agcgcgccgc cctcggcatt cccgccctcc
     7981 ctttgaatgc gcagcaaacc gccgatttgg ttgagctgct gaaaaacccg cccgcaggcg
     8041 aaggcgagtt cttggtcgag ctgcttgccc accgtgttcc gcccggtgtg gacgatgccg
     8101 ccaaagtcaa agcctcattc ctggctgccg ttgccgaagg cagcgcatcc agcccgctgg
     8161 tttcccccaa atatgcgacc gaactcttag gtacgatgct cggcggttac aatatccacg
     8221 ccttaatcga actcttggac gacgacaaac tcgcgcccat tgccgccaaa ggcttgaaac
     8281 atacgcttct gatgttcgat tccttccacg acgttcagga aaaagccgaa aaaggcaaca
     8341 aatacgcgca ggaagttttg caatcttggg cagatgccga atggttcgcc tcccgtgcca
     8401 aagttcccga aaaaatcacc gttaccgtct tcaaagttga cggcgaaacc aatacagacg
     8461 acctctctcc cgcgcccgac gcgtggagtc gtcccgatat tccgctgcac gcgctggcca
     8521 tgctgaaaaa cccgcgcgac ggcatcacgc ccgacaaacc gggcgaagtc ggtccgatta
     8581 aattgttgga agaactcaaa gccaaaggcc atccggttgc ctacgtcggt gacgtggtcg
     8641 gtaccggttc ttcacgcaaa tccgcgacca actccgtcat ttggcatacc ggcgaagaca
     8701 tcccgttcgt gccgaacaaa cgcttcggcg gcgtgtgctt gggcggtaaa atcgcgccga
     8761 ttttcttcaa cactcaagaa gactccggcg cgctgccgat tgaagtcgat gtttccgcgc
     8821 tgaaaatggg cgatgtcgtc aatatccttc cttatgaagg taaaatcgtg aaaaacggcg
     8881 agactgttgc cgagtttgaa ttgaaatcac aagtattgct ggacgaagtg caagccggcg
     8941 gccgtatcaa cctgattatc ggtcgcggtc tgaccgccaa agcgcgcgaa gccctgaaac
     9001 tgcctgcctc tactgcattc cgcctgccgc aagcgcctgc cgaaagcaaa gtcggtttca
     9061 ccttggcgca aaaaatggtc ggtcgcgcct gcggtctgcc cgaaggacaa ggcgtgcgtc
     9121 cgggtactta ctgcgaaccg cgcatgacga cggtcggctc gcaagatacg accgggccga
     9181 tgacccgcga cgagttgaaa gacttggctt gtttgggctt ctccgccgat atggtgatgc
     9241 agtctttctg ccacaccgct gcctatccga aacctgtcga tgtaaaaacc cataaagaac
     9301 tgcccgcctt tatttctacc cgtggcggcg tgtccctgcg tccgggcgac ggcgtcatcc
     9361 actcgtggct caaccgcctg ctgttgcctg atacagtcgg tacaggcggc gacagccaca
     9421 cccgtttccc catcggtatt tccttccccg caggttcagg cttggtcgct tttgccgccg
     9481 caacgggcgt aataccgctc gatatgcccg agtccgtatt ggtacgtttc agcggcaagc
     9541 tgcaaccggg cgtaaccctg cgcgatttgg tgaacgccat cccgctttac gcgattaaac
     9601 aaggtttgct gaccgttgcc aaagccggta agaaaaacat cttctccggc cgcatcctcg
     9661 aaatcgaagg cctgcccgat ttgaaagtgg aacaagcctt tgaattgacc gacgcatccg
     9721 ccgaacgctc cgccgccggc tgtaccgtga agctcaataa agagccgatt atcgagtaca
     9781 tgaaatccaa cgtcgtgttg atgaaaaata tgattgccaa cggctatcaa gatccgcgcg
     9841 ctttggaacg ccgcatcaaa gctatggaaa aatggctggc aaatcccgag ttgctcgaag
     9901 cggataaaga tgccgaatac gccgccgtga ttgaaatcaa catggacgac atcaaagagc
     9961 cgattatcgc ctgcccgaac gacccggacg acgtatgctt tatgtccgaa cgctccggca
    10021 ccaaaatcga cgaagtgttc atcggttctt gtatgaccaa catcggccac ttccgcgccg
    10081 cctccaaact tttggaaggc aagagcgaca tccccgtccg cctgtgggta gcgccgccga
    10141 ccaaaatgga cgcgaaagag ttgtccgacg aaggtcacta cggcgtactc ggccgcgccg
    10201 gcgcgcgtat ggaaatgccg ggctgttcgt tgtgtatggg taaccaagcc caagtacgcg
    10261 aaggtgcaac tgtcatgtcc acttcgaccc gcaacttccc gaaccgcttg ggtaaaaaca
    10321 ccttcgttta cctcggctcg gcagagttgg cggcgatttg ctccaaactg ggtaaaatcc
    10381 cgaccgttga agaatatcaa gccaatatcg gcatcatcaa cgaacagggc gataaaatct
    10441 accgctatat gaacttcaac gaaatcgaca gctacaacga agtagccgag accgtgaatg
    10501 tttgatcccc gtcatccgta tggagtaagg gattgaccgc aatgccgtct gaacaacctt
    10561 cagacggcat tgcaacattc cgctaaccct tctttccgca aacgctgcaa atacggcgtt
    10621 cacgccccca cataaaggaa acgacagtga acctgaaaaa ccgccatttt ctgaaacttt
    10681 tggacttcac gccggaagaa atcaccacct acctcgacct tgccgccgag ttgaaagacg
    10741 ccaaaaaggc agggcgcgag attcagcgga tgaaagggaa aaacatcgcc ctgatttttg
    10801 aaaaaacatc cacgcgcaca cgctgtgcgt ttgaagtcgc cgcacgcgac caaggcgcgg
    10861 atgcaaccta tctggaaccg tccgccagcc aaatcgggca caaagaaagc atcaaagaca
    10921 cggcgcgcgt cttaggcaga atgtacgatg ccatcgaata tcgcggcttc gctcaggaaa
    10981 ctgtcgaaga attggcaaaa tatgcgggcg tacccgtgtt caacgggctg accaacgagt
    11041 tccatcccac acaaatgctt gccgacgcac tgactatgcg cgaacacagc ggcaaacctt
    11101 tgaaccaaac cgcgtttgcc tacgtcggcg acgcgcgtta caacatgggc aattccctgc
    11161 tgattttagg ggcaaaattg gggatggacg tgcgtatcgg cgcacctcaa agcctgtggc
    11221 cgtctgaagg cattatcgcc gccgcacacg ccgccgccaa agaaaccggt gcaaaaatta
    11281 ccctgaccga aaacgcgcat gaagccgtca aaggtgtcgg tttcattcat actgacgtat
    11341 gggtcagcat gggcgagccg aaagaagtct ggcaggaacg catcgatttg ctgaaagatt
    11401 accgcgttac gcccgaactg atggcggcat cgggcaatcc gcaagtcaaa ttcatgcact
    11461 gcctgcccgc cttccacaac cgcgaaacca aagtcggcga atggatttac gaaaccttcg
    11521 ggctgaacgg tgtggaagtt acagaagaag tattcgaaag tccggccggc atcgtgttcg
    11581 atcaggcgga aaaccgtatg cacacgatta aagcggtaat ggtcgcggct ctgggcgact
    11641 gacagaactg tgcctgttta aattcatccg caacacagat accgtccgaa cacgatgttc
    11701 agacggtatc catataacaa actgcctaca cgatgtgtag gcagtcccgt ttgaaaacaa
    11761 tcagtttttg tcttggtcaa ccaatttgtt ggccgtaatc caaggcatca tggcacgcag
    11821 tcgtgcgccg actttttcaa cttggtggtc ggcattcaaa cggcggcggg cagtcataga
    11881 cgcgtagttg acattaccct cttggataaa catttttgcg tattcgccgg tttggatgcg
    11941 tttcagggca ttgcgcatgg cttctttgct ggaagcattg accacttcag ggccggtaac
    12001 gtattcgccg tactccgcat tgttggaaat ggagtagttc atattggcaa taccgccttc
    12061 gaaaatcagg tcaacgatca gtttcatttc gtgcaggcat tcgaagtaag ccatttcagg
    12121 cgcgtaaccg gcttcggtca gggtttcaaa acctgctttg atcaactcgg ccacgccacc
    12181 gcacaatacg gcttgttcgc cgaacagatc ggtttcggtt tcttcgcgga aagtggtttc
    12241 aatcacaccg cctttggtgc cgccgttggc agccgcataa gacagggcga tgtctttggc
    12301 cttgccggaa ttgtcttggt aaacggcaat cagagaaggc acgccgccgc cgcgtttgta
    12361 ttcactgcgt acggtatgac ccggaccttt gggggcaacc ataatcacgt ccaagtcggc
    12421 acgcggaacg atttggttgt agtgcacgtt gaagccgtgt gcaaatgcca gcgtcgcgcc
    12481 ttctttcaaa ttggctgcaa cttcggcgtg atagacggca ggcatggttt cgtcaggcag
    12541 cagcagcata acgacatcgg cttctttggt cgcttcagca acggttttaa caacatggcc
    12601 ggctgcttcg gcttttttcc aagaagagcc gtggcgcaga ccgatcacca cgtttacacc
    12661 cgaatctttc aggttggcag catgggcatg accttgcgaa ccgtaaccga tgatggcaac
    12721 ggttttgcct ttgatcaggg acagatcggc atctttatcg taatagactt gcatttgatt
    12781 tcctttaagg taaatggttg tcgaagcctt aaaatgttga gcggcttcgg acgggttaaa
    12841 cagagtgtgc cgcttaaacg gcaacttcat tcatcaatac gatttccaac gcttcggttt
    12901 tgccgtcgac ggactggacg aaggcttgga aatgcgcgct ggcattatgt tcgtcaatag
    12961 ctgcttggga tttccaattt tccacgaaaa caaaacggtt cggtttgccg atttcctgat
    13021 ggagattgta gctgatgttg ccctcttccg cacggctggc tttgaccagt tctttaaact
    13081 gtgctgccag tgtttccgtg tattccggtt tgacggtaac cagtgcgaca attttaatgt
    13141 tcgacataaa tctctcctgc cgttcgtttt tcagacggca ttcaaatacc atgccgtctg
    13201 aaaggttacg gcgttaaatt ttcaaaatac gctcaccgcg accgatgccg gccgcacctg
    13261 tacgtacggt ttccaaaatt tgggcgcgtc cgaccgtttc caaaaaggaa tccagcttgt
    13321 cggtcgagcc ggtaatttca atcgtatagc tgcggtcggt tacgtcgatg atgctgcccc
    13381 ggtagatttc ggtcaagcgt aaaaattcgt cgcggtcttt gccggcggca cggactttta
    13441 ccaacatcag ttcgcgttcg acaaaacggc tttcgttcaa atcgaccact ttaatcactt
    13501 caatcaattt attgagttgc ttggtgattt gttcgataac ctgctcgtcg ccgtgggtaa
    13561 cgatggtcat ccgtgacagg gttttgtctt cggtcggcgc aaccgccaaa gaatcgatat
    13621 tgtaatcgcg tgcagagaac aaaccgacca cgcggctcat cgcacctgat tcgttttcga
    13681 tcagaacaga taagatatgt cgcatttgcc tctccttacg cctttccgtc cgtacgcata
    13741 tgcggcggaa gtaccatttc gtccaaacct ttgccgttgc cgaccatagg catcacattc
    13801 tgtttctggt cggtcaggaa gtcgataaac accagcctgt ctttttggtt caatgcttcc
    13861 aacaaggcac cttccacatc agatttattg tccacgcgga tgccgatatg gccgtatgcc
    13921 tcggcaagtt tgacgaaatc gggcaaagaa tcgaaatagg tttccgactc tcggccgccg
    13981 taatatattt cctgccactg gcgtaccata cccagataac cgttgttcag cgtaatgacg
    14041 ttaaccggaa tccgatattg gaaacaggtg gacaactctt ggatgttcat ctggatcgag
    14101 ccgtcgccgg taatacagaa tacgtcttga tccggggcgg caagttttgc accaatcgca
    14161 taaggcagac ccacgcccat cgtacccaaa ccgccggagt tgagccattg gcgcggacgt
    14221 tcgaaaggat aatattgagc cgcaaacatt tgatgctgcc ctacatccga tgtgatgatt
    14281 gccgaattgc cggtaatctc ggcaagcttc tgaatcacat attggggctt gataatttcg
    14341 ctgccgttgt caaaccacaa gcaatcgcgg gaacgccatt cctctatggt tttccaccat
    14401 ttgcccaaag catcttcaga cggcacggac tcttgttttt gccacagcgc aaccatctcg
    14461 gacaaaatgt ttttcacgtc gccgacaatc ggaatgtccg ccttcacgcg tttggcgatg
    14521 ctggaaggat cgacatcgat atggataacc ttcttcgcct tctcgaaaaa tttggacggt
    14581 acggaaacca cacggtcgtc aaaacgcgca cctacggcaa gaacgacatc cgcattctgc
    14641 atggcaaggt ttgcctcgta agtaccgtgc ataccgagca taccgaggaa ttggcggtcg
    14701 ccggaaggat aagcgcccaa gcccatcagc gtacccgtgc acggagcacc cgtcattcgg
    14761 acaaatcggg tcagctcttc agaagcatta cccaacacca cgccgccgcc aaaatagacg
    14821 accgggcgtt tggcagatgc caacatctgc acggcctttt taatctgacc gatatgccct
    14881 tgaacaaccg gttgatacga acggataaaa atgtcttcct gaggatagct gaatttcgcc
    14941 atcgcctgcg taacatcttt cgggacatca agcaccacgg gccccggtcg gccgcttgcg
    15001 gcaatttgga acgccttttt aatggtttcc accaactcat tgatgtccgt aaccaagaaa
    15061 ttgtgtttga cgcacggacg ggtaataccc accgtatcaa cttcttggaa cgcatccgta
    15121 ccaatcaggg aattgcctac ctgtccgctg atgaccacca tcggaatcga atccgtatag
    15181 gcagtagcaa taccggtcag cgcattggta acgcccgggc cggatgtaac caatgccacg
    15241 cccaccttac cgctgacgcg cgcatacgca tctgccgcgt gtactgccgc ctgctcatgg
    15301 cgggtaagaa tgtgtttgaa tttattgagt tggaacaggg catcgtagat ttcgataacc
    15361 gcaccgccgg gataaccgaa aacgtactcg acgccttcgg ctttgagact ctgcactatg
    15421 atttgcgcgc ctgataactg cataacgacc tcttttatac ggtttcaaac caatagggac
    15481 aaaccgcttt gccacagcac ctgtaatgca attccaccaa gcagcgattt agggtacgcg
    15541 cattggggga acacggcaac agacagatta tccaatcaat tggaaaggaa cacagagttt
    15601 gtgaaaaaga gtaaaaacga taacgcaaac cgacagttca atcaagaaaa atctttcatc
    15661 ttttaatatt ttttgaaagc ggagaaattt ttttgaaagc ggagaaatta ttgattgatt
    15721 ttaaaagaat aaaatcagga gtaccttt
//
LOCUS       DAXFZM010000058        15514 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.058, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000058 DAXFZM010000000
VERSION     DAXFZM010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 15514)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15514)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15514
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.058"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            177..926
                     /locus_tag="ACFJAG_001448"
     CDS             177..926
                     /locus_tag="ACFJAG_001448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HFC3980711.1"
                     /translation="MKKWTRDETLVALYLYYIIPFQKVSKDNPVIQEYAEILGRTPSA
                     LGMKIGNLGRLDPTLKVKNISGLSNGSKMDVVVWNEFSGDWEQLNKEFEGVISQYQSN
                     DENSNIEIESPEIPKGRERFARISVRVNQGFFRSSVLAAYNNQCCITGLKQPELLVAS
                     HIKPWGEDKDNRLNPRNGLCLNALHDKAFDRGLLGIDENFKIIFSPLLAKTEGFDDLF
                     KPYENRMIRLPERLNPSLEFLKFHRENIFQS"
     gene            1017..3380
                     /gene="pheT"
                     /locus_tag="ACFJAG_001449"
     CDS             1017..3380
                     /gene="pheT"
                     /locus_tag="ACFJAG_001449"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HFC3980712.1"
                     /translation="MQFSYSWLKTQANPDLSADKLEHLLTMAGLEVEEIDTAAPAFSG
                     VVVAEVKSVEKHPDADRLNVTQVDAGTGELVQIVCGAPNVKPGIKVPCSLPVAVLPGN
                     FKIKPTKMRGVPSNGMLCSTNELGLPDDGVDGLHILPEDAPVGTNIREYLDLDDMLFT
                     LKITPNRADCLSVKGIAREVSALTQCAFTPVEIQTAPIGSEKKQAVRIDAPADCGRFI
                     SRVIENVNAKAATPDWMKQRLERSGIRSISALVDIGNYVMLEIGQPMHVFDADKLSGS
                     LIVRRAQNGETLACLNEKTVTLADNTLVVADEKGALSLAGLMGGAASAVSDGTQNIVL
                     EAAWFEPEIIVGKSRQYGFGSDSSFRFERGVDYRLQADAIERATELVLQICGGAAGEM
                     VEAQGKLPEAKQVGLRLGRLKTVLGVDIPAEQVETILQHLGLQPEKTAEGFRITAPSF
                     RFDIEIEADLIEEIGRVYGYENIPDDYTSGRLKMSELPETRRPRFAVYNEMAARGYRE
                     VISYAFVDEQWELDFAANAAPIRLQNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRV
                     RVFEIACVFGKGSDGRFVQNERIGGLWYGAAMPEQWGEKTRNADFYDIKADVENLLKN
                     KAVEFVKTGHPALHPGRAANIVSDGKVIGFVGELHPKWLQKYDLPQAPLVFEIDMAAV
                     LECGKTRYRAVSKFQPVRRDLAFVMPEVMNHDDLLLVLKGAANKLVQEISVFDVYRGT
                     GLPEGMKSVAVKVILQDMENTLTDEAVEPLIGKLIGVATEAGARLRS"
     gene            3454..3756
                     /locus_tag="ACFJAG_001450"
     CDS             3454..3756
                     /locus_tag="ACFJAG_001450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002641098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit alpha"
                     /protein_id="HFC3980713.1"
                     /translation="MTLTKAELADILVDKVSNVTKNDAKEIVELFFEEIRSTLASGEE
                     IKISGFGNFQLRDKPQRPGRNPKTGEEVPITARRVVTFHASQKLKGMVEHYYDKQR"
     gene            3740..4048
                     /locus_tag="ACFJAG_001451"
     CDS             3740..4048
                     /locus_tag="ACFJAG_001451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980714.1"
                     /translation="MTNNVDLTIPAKRYFTLDELCGLLQISPYGFAQWQHDHGVVVGY
                     GGERYTRLDVVKLLKLKSTFAPYAEGAESGSDGNRPVTLQEIGDGLKDLLEDLDKELC
                     "
     gene            4224..4709
                     /locus_tag="ACFJAG_001452"
     CDS             4224..4709
                     /locus_tag="ACFJAG_001452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009349087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FxsA family protein"
                     /protein_id="HFC3980715.1"
                     /translation="MRFFGIGFLVLLFLEIMSIVWVADWLGGGWTLFLMAATFAAGVL
                     MLRHTGLSGLLLAGAAVKSSGKVSVYQMLWPIRYTVAAVCLMSPGFVSSVLAVLLLLP
                     FKGGAVLQAGGAENFFNMNQSGRKEGFFHDDDIIEGEYTVEEPYGGNRSRNAIEHKKD
                     E"
     gene            4901..5125
                     /locus_tag="ACFJAG_001453"
     CDS             4901..5125
                     /locus_tag="ACFJAG_001453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980716.1"
                     /translation="MSVWDIWDRMVEIYHKYKKPCLVLAVDFVMGMVFIEPNEEPCIG
                     RCYAPMPESPDFANAVAMAVAMICIVFIYD"
     gene            5343..6644
                     /gene="bioA"
                     /locus_tag="ACFJAG_001454"
     CDS             5343..6644
                     /gene="bioA"
                     /locus_tag="ACFJAG_001454"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004015 -
                     adenosylmethionine-8-amino-7-oxononanoate transaminase
                     activity [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HFC3980717.1"
                     /translation="MPSEHQHTSSLLNFDRTHLLHPYTSMTDPLPVYPVKRAEGVFIE
                     LADGTRLIDGMSSWWCAIHGYNHPVLNQAVENQMKQMAHVMFGGLTHEPAVELGKLLV
                     GILPQGLDRIFYADSGSVSVEVALKMAVQYQQARGLTAKQNIATVRRGYHGDTWNAMS
                     VCDPETGMHHIFGSALPQRYFVDNPKNRFDDEWDGADLQPVRALFEAHHVDIAAFILE
                     PVVQGAGGMYFYHPQYLRGLRDLCDEFDIVLIFDEIATGFGRTGKMFACEHAEVVPDI
                     MCIGKGLSGGYMTLAAAITSQKVTETISRGEAGVFMHGPTFMANPLACAVACASVKLL
                     LSQDWQANIRRIESILKGRLKAAWDIRGVKDVRVLGAIGVIELEKGVDMARFQADCVA
                     QGIWVRPFGRLVYLMPPYIISDGILTKLADKTVQILKEHSK"
     gene            6641..7288
                     /gene="bioD"
                     /locus_tag="ACFJAG_001455"
     CDS             6641..7288
                     /gene="bioD"
                     /locus_tag="ACFJAG_001455"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004141 - dethiobiotin synthase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dethiobiotin synthase"
                     /protein_id="HFC3980718.1"
                     /translation="MKGVYFVSGIDTDIGKTVATGMLAKQLLQQGKSVITQKPVQTGC
                     QDIAEDIAVHRKIMGIPMQEADEQRLTMPEIFSHPASPHLAARLDGRGLDLDKIRTAT
                     QELAAQYEVVLVEGAGGLMVPLTEKLLTIDHIQQQAYPVILVTSGRLGSINHTLLSFV
                     VLKQYGIRLHSLVFNHIHDSRDAHVAQDSLNYLQCRLKADFPEAEWMELAKTGAV"
     gene            7303..7779
                     /locus_tag="ACFJAG_001456"
     CDS             7303..7779
                     /locus_tag="ACFJAG_001456"
                     /EC_number="4.1.3.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008813 - chorismate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate lyase"
                     /protein_id="HFC3980719.1"
                     /translation="MEHLFGKWLPDLPAPVSDGIDLPMSRLLKARSLTAALCALPHTF
                     SVELLKLGEAETEYGRRRVRDVLLKLDGTAVVQARSACSVGSAFWQNILDCGTRPLGE
                     RLFQADLEGARSAFEFAVSSEGCGRYFAARRSRFSHQGEEMLLTEYFLPELKRFIG"
     gene            7799..7894
                     /locus_tag="ACFJAG_001457"
     CDS             7799..7894
                     /locus_tag="ACFJAG_001457"
                     /inference="COORDINATES: protein motif:HMM:NF026993.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH/endonuclease VII fold putative polymorphic
                     toxin"
                     /protein_id="HFC3980720.1"
                     /translation="MRQPASKPHFNIRDSNLDTGHVDGTHGHYNF"
     gene            7903..8310
                     /locus_tag="ACFJAG_001458"
     CDS             7903..8310
                     /locus_tag="ACFJAG_001458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980721.1"
                     /translation="MNIIEIISRNRFLKQIYPSGIMDISLVSFSTDLSNCILTIRTST
                     KPSVEIEKWGLWLKDYDTVEIELRNSFIKGMKCQNWSHNNRNICQVEIKNQEDGLKII
                     RFYDNNSNWLLELEVYGLVFQGCKTYMKEGYES"
     gene            8300..9190
                     /gene="ubiA"
                     /locus_tag="ACFJAG_001459"
     CDS             8300..9190
                     /gene="ubiA"
                     /locus_tag="ACFJAG_001459"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008412 - 4-hydroxybenzoate
                     octaprenyltransferase activity [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate octaprenyltransferase"
                     /protein_id="HFC3980722.1"
                     /translation="MNLKSPLFLRLSDRLDVYIRLMRADKPIGTLLLLWPTYWALWLA
                     SDGIPDLAVLAAFTIGTFLMRSVGCVINDFADRDFDGAVERTKNRPFAQGRVKKKEAL
                     LLTAFLCLLAALCLIPLNHLTWLMSLPALFLALTYPFTKRFFPIPQFYLGLAFSFGIP
                     MAFAAVGNSVPVEAWILFAANVLWTLAYDTVYAMADKEDDLKIGIKTSAVTFGRYDIA
                     AVMLCHGGFTLLMAVLGAVIGAAWAYWTAIPIVLLLQYRQYAAIKSRVRQICFETFLA
                     NNRIGWVWFAAIFAHTFFAK"
     gene            9375..9824
                     /gene="ptsN"
                     /locus_tag="ACFJAG_001460"
     CDS             9375..9824
                     /gene="ptsN"
                     /locus_tag="ACFJAG_001460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS IIA-like nitrogen regulatory protein PtsN"
                     /protein_id="HFC3980723.1"
                     /translation="MSLIGEILPLSHIVLDMEVGSKKRLFEEAGLLLERESSLSHADV
                     FECLFAREKLGSTGLGQGVAIPHGRHASVKQATGAFIRTREPVGFDAPDGKPVSLVFI
                     LLVPENATGEHLEVLSKLAGKFSQKSIRESLMTVASAEEARAILTEE"
     gene            9828..10790
                     /gene="hprK"
                     /locus_tag="ACFJAG_001461"
     CDS             9828..10790
                     /gene="hprK"
                     /locus_tag="ACFJAG_001461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006109 - regulation of carbohydrate
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HPr(Ser) kinase/phosphatase"
                     /protein_id="HFC3980724.1"
                     /translation="MPSISVRRLFDDNQYKLQLAWAAGNSGADNRIGVEADKPVLALV
                     GHLNFIHPNQIQVVGLAESEYLNRLESGETGYQFGDLFDISMSLVIVANDLPVSPGLR
                     DYCHKNDIPLLTSKLESPYLMDVLRIYLQRTLAASSVKHGVFLDVFEIGVLITGHSGL
                     GKSELALELISRGHSLIADDAVELFRIGPETLEGRCSPMLRDFLEVRGLGILNIRHIF
                     GETSIRPKKILQLIINLVEADDEYMKQLDRLSIRTETESILNVNVRSVTLPVAVGRNL
                     AVLVEAAVRNYILQLRGKDSTREFLERHQTQLKENEQNHENRPD"
     gene            10771..11625
                     /gene="rapZ"
                     /locus_tag="ACFJAG_001462"
     CDS             10771..11625
                     /gene="rapZ"
                     /locus_tag="ACFJAG_001462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HFC3980725.1"
                     /translation="MKIVLISGLSGSGKSVALRQMEDLGYFCVDNLPLEMLPSLVSYH
                     IERADETELAVSVDVRSGIDIAQAREQIAYLRGLGHRVEVLFVEAEEAVLVRRFSETR
                     RGHPLSNQDMTLLESLKKEREWLFPLKEIAYCIDTSKMNAQQLRHAVRQWLKVERTGL
                     LVVLESFGFKYGVPNNADFMFDMRSLPNPYYDPELRPYTGMDKPVWDYLDGQPLAQEM
                     VDGIERFVTRWLPRLEDESRSYVTVAIGCTGGQHRSVYIVEKLARRLKGRYELLIRHR
                     QAQNLSGR"
     gene            11706..12647
                     /gene="ylqF"
                     /locus_tag="ACFJAG_001463"
     CDS             11706..12647
                     /gene="ylqF"
                     /locus_tag="ACFJAG_001463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase YlqF"
                     /protein_id="HFC3980726.1"
                     /translation="MAIQWFPGHMNKARKAIAERAKSVDMVIEMLDARMPASSENPLL
                     AQLSKGKPKLKILNKQDLADPERTKVWLDHYNSRPDTRAIALDSSETGAHGKITQACR
                     AMIPHRQGIDKPLRVLICGIPNVGKSTLINGMIGKKSAKTGNEPGITKAEQRLFLADD
                     FWLYDTPGMLWPKIIVEESGYNLAAGGAVGRNALDEEEVALELLDYLRRHYLPMLQER
                     YQADKDPSSHWDDNSWLEWIAKKRGAVLSGGRVNYQKAAENILTDFREGKIGRITLET
                     PNQWETWLKKARQKEAELKAIREARKAERKGQKPSEA"
     gene            12748..13350
                     /locus_tag="ACFJAG_001464"
     CDS             12748..13350
                     /locus_tag="ACFJAG_001464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA];
                     GO_process: GO:0051304 - chromosome separation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="HFC3980727.1"
                     /translation="MTDKISPDALIEAALLTQTEPLTEKSMRELCVPPLSQDKLIDVL
                     AQLKTRWQDRALQLVHTQEGWRFQIVQTAFERLGSLQEQRAPRYSRAVMETLAIIAYQ
                     QPVTRGDIEGIRGVAVSQNVMQTLQDRGWIEVIGHRDTLGKPALWATTATFLSDLRLD
                     GLEELPPLTELGELVLPDLIEMPPTDEEEPETVPSDTLPN"
     gene            13534..15207
                     /gene="recN"
                     /locus_tag="ACFJAG_001465"
     CDS             13534..15207
                     /gene="recN"
                     /locus_tag="ACFJAG_001465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HFC3980728.1"
                     /translation="MLLTLSLRDFVIVENLNLDFQSGFTVLTGETGAGKSITLDAIGL
                     LLGDKADYSQVRSGAKEAQLSALFDISHLPALKAELREQGLLDEGGKELSIRRIIDAK
                     GKSRSFINNQAATLAQLKAVGGQLIDIHGQNDHHSLNQEAAQRELLDAFVGGRVQAET
                     VRQLYQNWANAKKALQEAQEHADAVIIERERLEWQFNELNQLDIKQGEWEALSQSHDS
                     LAHSAELLQAAEEVGSKIDGDNGIQRHIYQCQKLLANLQNIEPRFAESLNMLASIEAE
                     LGEISANMRDVAGHSDINPNELAAQEQRMGELMGMARKYRIEPEELPAKLAEIEERLQ
                     SLQAAADLDALEHNVAHNFAEYQEAAHILSAMRHQAAGRLSSETTEHMQHLAMKGARF
                     DIVLLPSSPTAHGLEQVQFQVAANKGNPPRPLNKVASGGELARISLALQVVASQYTQV
                     PTLIFDEVDTGIGGGVAEMVGKALRALGRKHQVLAVTHLPQVASCGENHWRVRKHSEG
                     EQTVSEISILDEIQRIEEVARMLGGEVITDTTRQHAAELLQLASKNSLF"
     gene            15318..15394
                     /locus_tag="ACFJAG_001466"
     tRNA            15318..15394
                     /locus_tag="ACFJAG_001466"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:15352..15354,aa:Arg,seq:acg)
     gene            15412..15486
                     /locus_tag="ACFJAG_001467"
     tRNA            15412..15486
                     /locus_tag="ACFJAG_001467"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:15445..15447,aa:Glu,seq:ttc)
BASE COUNT         3953 a         3624 c         4201 g         3736 t
ORIGIN      
        1 attgactatt tttcttcaga aatagacgac tggttattgg caagcgagaa ggagttaaaa
       61 gattatgatg tatacctata caaattagta ctagatggac agcaatatgt tcagggaata
      121 agaaaatctg tattgtacga tttccttatg gaaaatcaga aagatagctg ataaaaatga
      181 aaaaatggac tagagatgaa accctggttg ccctttatct ttattacatc attccttttc
      241 aaaaggttag taaggacaat cctgttattc aagaatatgc tgaaatactg ggcaggacac
      301 cgtccgcact cggtatgaag ataggaaatt tgggtcgttt agatcctacg ctgaaagtca
      361 aaaatatttc gggattaagt aatggcagca aaatggatgt tgtcgtatgg aatgagtttt
      421 caggagattg ggagcaactt aataaagaat ttgagggagt catttcccaa taccaatcaa
      481 atgatgagaa tagtaatatt gaaatagaat cacctgagat tccaaaggga agggaaaggt
      541 ttgcaagaat atcagtacgc gtcaatcagg gctttttccg ttccagtgtt ttggcagcat
      601 acaataatca atgttgtatt actggattaa aacaacctga attgttagtt gctagtcata
      661 tcaaaccctg gggggaagat aaggataacc gtttaaaccc aaggaatggg ctatgtttga
      721 atgcgttaca tgacaaagct tttgataggg ggttgttagg aatagatgaa aatttcaaaa
      781 ttatattttc tccactactg gcaaaaacag aaggatttga tgatttattt aaaccatatg
      841 aaaatcggat gataagactg cctgaaagac taaacccaag tctggaattt ttaaaatttc
      901 acagagaaaa tatttttcag agttgagtaa atatcaacat taaccagaat tctaaaacag
      961 actgtctgaa cgaaaattga taaaacaaaa gttaattaat tgattgagaa cataacatgc
     1021 aattctccta ctcatggctg aaaacccaag ccaatcctga tctttctgcc gataaactgg
     1081 aacatctttt gaccatggcc ggtttggaag tggaagaaat cgatactgcc gcccctgctt
     1141 tcagtggcgt ggttgttgcc gaagtaaaat ctgttgaaaa acatcctgat gcagaccgtt
     1201 tgaacgttac tcaagttgat gccggtacgg gcgagttggt tcagattgtt tgtggtgcgc
     1261 cgaatgtcaa gccgggcatt aaagtgccgt gttcgttgcc ggttgccgtt ttgccgggca
     1321 attttaaaat taagccgact aaaatgcgcg gcgtaccatc aaacggtatg ctgtgttcga
     1381 ccaatgaact gggtttgcct gatgatggtg tagacggcct gcacattctg cctgaagatg
     1441 cgcctgtcgg taccaacatc cgcgaatact tggatttgga cgatatgctg tttacgttga
     1501 aaattacgcc taaccgcgct gattgcttga gtgttaaggg cattgcgcgt gaggtttctg
     1561 cgttgactca atgtgcgttt acgcctgttg aaattcagac ggcccctatc ggcagtgaga
     1621 aaaaacaggc tgtccgtatt gatgcaccgg ctgactgcgg ccgttttatc agccgcgtta
     1681 ttgaaaatgt caacgcgaaa gcggctactc ctgattggat gaaacaacgt ttggaacgca
     1741 gcggtatccg cagcatttcc gcattggtgg acattggcaa ctatgtgatg ctggaaatcg
     1801 gtcagcctat gcatgttttc gatgctgata agctgtcggg cagtttgatt gtccgccgtg
     1861 ctcaaaatgg cgagactttg gcgtgtctga atgagaagac ggttactttg gctgacaata
     1921 cactggtggt cgctgatgaa aaaggtgcgt tgagcttggc cggcttgatg ggtggcgcgg
     1981 cgagcgcggt ttcagacggc acgcaaaata tcgtgctgga agcggcttgg tttgagcccg
     2041 aaatcatcgt cggcaaatcg cgccaatacg gtttcggttc ggattcgtcg ttccgcttcg
     2101 agcgcggcgt ggattaccgt ttgcaggcgg atgccattga acgcgccacc gaattggttt
     2161 tgcagatttg cggcggtgcg gcaggcgaga tggtggaagc acaaggtaaa ttgcccgaag
     2221 ccaagcaggt cggattgcgt ttgggtcgtc tgaaaaccgt gttgggcgtg gacattcctg
     2281 ccgaacaggt ggaaaccatt ttgcaacact tgggtctgca gcctgagaaa acggcggaag
     2341 gcttccgcat taccgcgccg agcttccgtt tcgacatcga aattgaggct gatttgattg
     2401 aagaaatcgg acgcgtttac ggctatgaaa acatccccga cgattacacg tcaggccgtc
     2461 tgaaaatgtc ggaactgccc gaaacacgcc gtccgcgttt tgccgtttac aacgaaatgg
     2521 cggcgcgcgg ctaccgcgaa gtgatcagct atgccttcgt tgacgagcag tgggaactcg
     2581 attttgccgc caacgccgcc cccatccgcc tgcaaaaccc gctggcggcg caatatgccg
     2641 tgatgcgttc tacgttgatt ggcggcttag tggaaatttt gcaaaacaac ctgaaccgca
     2701 agcaaaaccg cgtgcgcgtg tttgaaatcg cctgcgtgtt cggcaaaggt tcagacggcc
     2761 ggtttgtcca aaacgaacgc atcggcggtc tgtggtacgg cgcggcgatg cccgaacaat
     2821 ggggtgagaa aacgcgcaat gcggattttt acgacatcaa ggcggacgtg gaaaatctgt
     2881 tgaaaaacaa agcggtcgag ttcgttaaaa ccggacatcc cgccctgcat cccggacgtg
     2941 ccgccaatat cgtttcagac ggcaaagtca tcggctttgt cggcgaactg catccgaaat
     3001 ggctgcaaaa atacgacctg ccgcaagcgc cgctggtatt tgaaatcgat atggcggctg
     3061 tgttggaatg cgggaaaacg cgctatcggg ccgtatcgaa attccagccg gtgcgccgcg
     3121 atttggcgtt tgtgatgccg gaagttatga atcatgatga tttactgctt gtcttgaaag
     3181 gcgcagcaaa caagttggta caggaaatca gcgtgtttga cgtgtatcgc ggcacgggtc
     3241 tgcccgaagg gatgaagagc gtggcggtta aagtgatttt gcaggatatg gaaaacacgc
     3301 tgacggatga ggcggtcgag ccgcttattg gaaaactgat tggcgtggca acggaggcag
     3361 gggcgcggct tcgcagttaa aaaataaata ttcgcttgaa ttttaaataa aaattggtaa
     3421 taatccacaa ctgttacaac agaaggtaat catatgacac taactaaagc agaactggcc
     3481 gatattttgg tggataaagt cagcaacgtc accaaaaacg atgccaaaga aattgtcgaa
     3541 ctcttttttg aagaaatccg cagcactttg gcaagcggcg aagaaatcaa aatttccggt
     3601 ttcggaaatt tccagttgcg cgacaagccg caacgcccgg gccgtaatcc gaaaaccggc
     3661 gaggaagtgc cgattaccgc ccgccgcgtg gtaactttcc atgccagcca gaaactcaaa
     3721 ggcatggtgg aacactacta tgacaaacaa cgttgatttg acgattcctg caaaacgcta
     3781 tttcacgctg gacgagttgt gcggactgtt gcaaatcagc ccctatggtt ttgcgcaatg
     3841 gcaacatgat cacggtgtgg ttgtcggtta cggcggagaa cgctacaccc gtttggatgt
     3901 ggtgaaactg ttgaaactga agagcacgtt tgcaccgtat gcagaaggtg cggaatcggg
     3961 ttcggacggc aaccgtccgg ttacgcttca ggaaatcgga gacggtctga aagacctgtt
     4021 ggaggatttg gataaggagt tgtgctgatt tgagaccggt tgcaggtatg cagccggttt
     4081 tgttttacac gctaaaaata attattgcgt gatttcacat tgtttcggct tgaagcacat
     4141 ggttttgtaa tcatttacag gcagctcgct tggaatcctg ttcgggcggt ttgctgttta
     4201 cttaaatata aggatgacgg tcaatgagat ttttcggtat cggttttttg gtgctgctgt
     4261 ttttggaaat tatgtcgatt gtgtgggttg ccgattggct gggcggcggt tggacgctgt
     4321 ttctaatggc ggcaaccttt gccgccggtg tgctgatgct caggcatacg gggctgtccg
     4381 gtcttttatt ggctggcgcg gcggtaaaaa gtagtgggaa ggtatctgtt tatcagatgt
     4441 tgtggcctat ccgttatacg gtggcggcgg tgtgtctgat gagtccggga ttcgtatcct
     4501 cggtgttggc ggtattgctg ctgctgccgt ttaagggagg ggcagtgttg caggcaggag
     4561 gtgcggaaaa ttttttcaac atgaaccaat cgggcagaaa agagggattt ttccacgatg
     4621 acgatattat cgagggagaa tatacggttg aagagcctta cggcggcaat cgttcccgaa
     4681 acgccatcga acacaaaaaa gacgaataaa tatgaatgga atgccgtctg aaggttcaga
     4741 cggcattttt ccggtttgaa aatatagtgg attaacaaaa accagtacgg caaggcgagg
     4801 caacgccgta ctggtttttg ttaatccact ataaatttaa tccactataa aatagggctg
     4861 taaccttcaa tcggaatttg ttgcctgcgg gatatacggt atgagtgttt gggatatatg
     4921 ggacaggatg gtggaaatct atcataagta taagaagccg tgcctggttt tagcagtgga
     4981 ttttgtgatg ggtatggtat tcatagagcc gaatgaggag ccgtgcatcg gcagatgcta
     5041 tgcgcctatg ccggagtccc ctgattttgc caacgctgtt gcgatggctg ttgctatgat
     5101 ctgtatcgta tttatctatg attgattgaa gcgttgggcg gaggctgtgt gaaacggtat
     5161 tgggcgttgg gtcgtctgat tccaatcagg cttgaggaat gcgaaacggt gtgcgcttat
     5221 gttgcggacg atttgtttcg cggtttttcg cccgaaacgg atggaaaggt gtgggaagcg
     5281 gtctgtcgga gtagaatacg ctttttgcgt ttgaatgcag taataagaaa agagagaaac
     5341 ttatgccgtc tgaacatcaa cacacatcat cattacttaa tttcgaccgt acccatctgc
     5401 tccatcccta tacttccatg accgatccgc ttcccgttta tcctgtcaaa cgtgcagaag
     5461 gggtgtttat cgaattggcg gacggcacgc ggctgattga cgggatgtcg tcttggtggt
     5521 gtgcgataca cggttacaat catcccgttt tgaatcaggc ggttgagaat cagatgaaac
     5581 aaatggcgca cgtgatgttc ggcggcctga cgcacgagcc ggcggtggag ctgggcaagt
     5641 tgttggtcgg gattttgccg caggggctgg accgtatttt ttatgcggat tcgggttcgg
     5701 tttcggtaga agtcgcgttg aaaatggcgg tgcaatacca gcaggcgcgg ggtctgacgg
     5761 cgaagcagaa tattgcgacg gtacggcgcg ggtatcacgg cgatacttgg aacgcgatgt
     5821 ccgtttgtga tccggaaacg gggatgcacc atattttcgg cagcgcgttg ccgcagcgtt
     5881 attttgtcga taatccgaaa aaccgtttcg acgatgaatg ggacggggcg gatttgcagc
     5941 ctgtccgcgc cttgtttgaa gcgcatcatg tggatattgc cgcctttatt ttagaaccgg
     6001 tcgtgcaagg cgcgggcggc atgtattttt atcatccgca gtatcttcgc ggcttgcgcg
     6061 atttgtgcga cgaatttgat atcgtgttga tttttgacga aatcgccacc ggattcgggc
     6121 gcacgggcaa gatgtttgcc tgcgaacacg cggaggtcgt gccggatatt atgtgtatcg
     6181 gcaagggttt gagcggcggc tatatgacgc tggcggcggc aatcacttcg caaaaagtca
     6241 ccgaaacgat ttcacgcggc gaagcgggcg tgtttatgca cggcccgaca tttatggcga
     6301 acccgctggc gtgtgccgtt gcctgtgctt cggtcaagct gcttttatcc caagactggc
     6361 aggcaaatat ccgccgtatc gaaagcatct taaaaggccg tctgaaagcc gcgtgggaca
     6421 ttcgcggcgt gaaagacgtg cgcgttttgg gtgctatcgg cgtgatagag ttggaaaaag
     6481 gcgtggatat ggcgcgtttt caagcggatt gcgtggcgca gggcatttgg gtacgcccgt
     6541 tcggcaggct ggtgtatctg atgccgccct atatcatttc agacggcatt ttgaccaaac
     6601 ttgccgataa aaccgtgcaa atcttgaagg aacacagcaa atgaaaggcg tttacttcgt
     6661 cagcggtata gacacggaca tcggcaaaac cgtcgccacc ggtatgttgg caaaacaatt
     6721 gttgcagcag ggcaaaagcg tgattacgca aaagcccgtg caaaccggtt gccaagacat
     6781 cgccgaagac atcgccgtcc accgtaaaat catgggcata cccatgcagg aagctgatga
     6841 acagcgtctg actatgcctg aaatcttcag ccatcccgcc tcgccccacc ttgccgcccg
     6901 actggacggc aggggtttgg acttggacaa aatccgcacc gccacacaag aattggcggc
     6961 gcagtacgaa gtcgttttgg tcgaaggcgc gggcgggttg atggtaccac tgacggaaaa
     7021 gctgttaacc attgatcata ttcagcaaca ggcttatccc gtcatccttg ttaccagcgg
     7081 acggctggga agcattaatc acaccctgct cagtttcgtc gtgctcaaac aatacggcat
     7141 tcgcctgcac agcctcgtgt ttaaccacat ccacgacagc cgcgacgcac acgtcgccca
     7201 agacagcctg aactatctgc aatgccgtct gaaagccgat tttcccgaag cggaatggat
     7261 ggagttggca aaaacaggcg cggtataaag attgggaaag atatggaaca cctatttggg
     7321 aaatggctgc ccgacttgcc cgcccccgtt tcagacggca tcgacctgcc gatgagccgg
     7381 ttattgaaag cccggtcgct gaccgccgca ttgtgcgcct tgccgcatac attttcggtg
     7441 gaactgctga aactgggcga agcggaaacg gaatacggac ggcggagggt gcgcgatgtg
     7501 cttctgaaac tggacggcac tgctgttgtg caggcacgaa gcgcgtgcag cgtcggttcg
     7561 gcgttttggc aaaacatttt ggactgcggc acacgccctt tgggcgagcg tctgtttcaa
     7621 gccgatttgg aaggggcgcg ttcggcgttt gagtttgccg tttccagtga aggatgcgga
     7681 cggtactttg ccgcgcggcg ttctcggttt tcccatcaag gcgaggaaat gctgctgacc
     7741 gagtattttc tgcccgaact gaaacgcttt atcggataaa ataccgtttt ttcaagctgt
     7801 gcggcaacct gcatctaaac cacattttaa tataagagac tccaatttag atacaggaca
     7861 tgtcgatggt actcacggac actataattt ttagtaagaa atatgaatat aatagaaata
     7921 ataagtagga atcgttttct aaaacaaata tatcctagtg gcataatgga tatttcacta
     7981 gtctcttttt caactgactt gtctaattgt attttaacta tccgaacaag tacaaagcct
     8041 tctgtagaaa tcgaaaaatg ggggctgtgg ctaaaagatt atgatacagt tgaaattgaa
     8101 ttaagaaata gctttattaa aggaatgaaa tgtcaaaatt ggtcgcataa caatagaaat
     8161 atatgccaag tagaaataaa gaaccaagaa gatggtctaa aaataataag attttacgac
     8221 aataattcaa attggttatt ggaactagaa gtttatggat tagttttcca agggtgtaag
     8281 acttatatga aagagggtta tgaatcttaa atccccttta tttttacgac tgtccgatcg
     8341 tttggacgtt tatatcagac tgatgagggc ggacaagccc attgggacgc tgcttttact
     8401 gtggccgacc tactgggcat tgtggctggc ttcagacggc attcccgatt tggcggtatt
     8461 ggcggcgttt acaatcggca cgtttttaat gcgcagtgtc ggctgcgtca tcaacgactt
     8521 tgccgaccgc gattttgacg gtgctgtcga gcgcaccaaa aaccgtccgt tcgcacaggg
     8581 cagggtcaag aaaaaagaag ccctgctgct gacggcattt ttgtgtctgc ttgccgcatt
     8641 gtgcctgatt ccgctgaatc atctgacatg gctgatgagc ctgcccgcgc tgttccttgc
     8701 gctgacttac ccgtttacca aacgcttttt tccgattccc caattttatc tgggacttgc
     8761 cttttccttc ggcatcccga tggcgtttgc cgcagtgggc aacagcgttc ccgttgaagc
     8821 gtggatactc tttgccgcca atgttttatg gacactggct tacgataccg tctatgcaat
     8881 ggcggacaaa gaggacgatt tgaaaatcgg catcaaaacc tccgccgtca cgttcgggcg
     8941 ttacgacatc gccgccgtta tgctgtgtca tggcggcttt accctgctga tggcagtatt
     9001 gggtgcggtt atcggtgcgg catgggcata ttggacggca atccccatcg tcctgctgct
     9061 gcaataccgc caatatgccg ccatcaaaag ccgcgtccgg caaatctgtt ttgaaacgtt
     9121 tttggcaaac aacagaatcg gttgggtgtg gtttgccgct atttttgccc atacgttttt
     9181 cgcgaaataa ggcagggcaa tgccgtctga agaaccgtaa actgctttgg acggcatttc
     9241 tatctgtgcc gaaaagcgtt aaaatatgtt tttgaaacgc tgtgttatgt cagcccgtgc
     9301 cgtatgcggg attgagattt gccccggcag tcggtacaat ccttctgttt tgcgatgtct
     9361 gaaaagagaa gcttatgagc cttatcggcg aaattttgcc tttgtcccat attgttttgg
     9421 atatggaggt gggcagtaaa aaaaggctgt ttgaggaagc gggcctgctt ttggaacgcg
     9481 aatcctcatt gtcccatgct gatgttttcg aatgtctttt tgcccgtgaa aaactcggtt
     9541 cgaccggttt ggggcagggt gtcgccatcc cccacggccg ccacgcgagc gtgaagcagg
     9601 cgacgggcgc gttcatccgt acgcgcgaac ccgtcggatt cgacgcgcct gacggcaaac
     9661 cggtttcact ggtttttatc ttgctggtgc cggaaaacgc aacgggcgag catttggaag
     9721 tcttatccaa actggccggc aagttttccc aaaaaagcat cagagaatcg ctgatgacgg
     9781 ttgcttctgc ggaagaagcc cgcgccatcc tgaccgaaga ataaaatatg cccagtatct
     9841 ccgtccgccg cctgtttgac gacaaccaat acaagttgca acttgcctgg gccgccggca
     9901 attcgggtgc ggacaaccgt atcggcgtag aggcggacaa gcccgtcctc gccctggtcg
     9961 gacacctgaa tttcatccat cccaaccaaa tccaagtggt cggtttggcg gagtcggaat
    10021 atctgaaccg cctcgaatcg ggggagacgg gttatcagtt cggagacctg ttcgatattt
    10081 ccatgtcttt ggtcattgtg gcaaacgatt tgccggtttc cccggggctg cgcgactact
    10141 gccacaaaaa cgacatcccc ctgttgactt ccaaactcga aagcccttat ctgatggatg
    10201 tgttgcggat ttacctgcaa cgcaccttgg cagcatcgtc cgtcaaacac ggcgtatttc
    10261 tcgatgtgtt tgaaatcggc gtgctgatta ccggacattc tggtttgggt aagagcgaat
    10321 tggcattgga actgatttcg cgcggccata gcctgattgc cgacgatgcg gtcgagctgt
    10381 tccgcatcgg tccggaaaca ttggaagggc gttgttcgcc tatgctgcgc gattttttgg
    10441 aagtgcgcgg cttggggata ctcaatatcc gccatatttt cggcgaaact tccatccgcc
    10501 ccaaaaaaat cctgcaactc attatcaatt tggtcgaggc ggacgacgag tatatgaagc
    10561 agctcgaccg gttgagcatc cgcaccgaaa ccgaatccat cctcaacgtc aacgtccgtt
    10621 cggttacgct gcccgtcgcc gtcggacgca accttgccgt tttggttgag gcggcggtac
    10681 gcaattacat tttgcagttg cgcggcaaag acagtacgcg cgaatttttg gaacgccatc
    10741 agacgcaact taaagaaaac gaacagaatc atgaaaatcg tcctgattag cgggctttcc
    10801 ggctcgggca aatccgttgc actgcgccaa atggaagatt tgggctattt ttgcgtggac
    10861 aacctgccct tggaaatgct gccgtcgctg gtgtcgtacc atatcgaacg tgcggacgaa
    10921 accgaattgg cggtcagcgt cgatgtgcgt tccggcatag acattgccca agcgcgcgag
    10981 cagattgcct atctgcgcgg actcggacac agggtggaag ttttgtttgt cgaggcggaa
    11041 gaggccgtgc tggtccgccg cttttccgaa acccggcgcg gacatccttt gagcaatcag
    11101 gatatgacgc tgttggaaag cctgaaaaaa gagcgcgaat ggctgttccc gcttaaggaa
    11161 atcgcctact gtatcgacac ttccaagatg aatgcccaac agctccgcca tgcagtccgg
    11221 cagtggctga aggttgagcg taccggactg ctggtggttt tggagtcctt cgggttcaaa
    11281 tacggtgtgc cgaacaacgc cgattttatg ttcgatatgc gcagtctgcc caacccgtat
    11341 tacgatcccg agttgaggcc ttacaccggt atggacaagc ccgtttggga ttatttggac
    11401 ggacagccgt tggcgcagga aatggttgac ggcatcgaaa ggtttgttac gcgttggttg
    11461 ccgcgtttgg aggatgaaag caggagctac gttaccgtcg ccatcggctg taccggcggg
    11521 cagcatcgtt cggtctatat tgtcgaaaaa ctcgcccgaa ggttgaaagg gcgttatgaa
    11581 ttgctgatac ggcacaggca ggcgcaaaac ctgtcgggcc gctaatcccg tcaaaccatt
    11641 atgccgtctg aaaccccgtc cgccgtttca gacggcattt caaatattga gaagaaagaa
    11701 cagacatggc aatccaatgg tttcccggcc atatgaacaa ggcaagaaaa gccatcgccg
    11761 agcgtgccaa aagcgttgat atggtgattg aaatgctgga cgcgcgtatg cccgcctcca
    11821 gcgaaaatcc actgttggcg cagctttcca aaggtaagcc caaactcaaa attttaaaca
    11881 agcaagacct tgccgaccct gaacgcacaa aggtctggct tgaccactac aacagccgcc
    11941 ccgacacccg ggccatcgcc ctcgattcct ccgaaaccgg cgcacacggc aaaatcaccc
    12001 aagcctgccg cgcgatgatt ccccaccggc aaggcataga caaacccctg cgcgttttga
    12061 tttgcggcat tcccaacgtc ggcaaatcca ccctcatcaa tggaatgata ggcaaaaaat
    12121 ccgccaaaac cggcaacgaa cccggcatta ccaaagccga acaacgcctt ttccttgccg
    12181 acgacttctg gctgtacgac accccgggaa tgctgtggcc gaaaatcatc gtcgaagaaa
    12241 gcggctacaa cctcgccgcc ggcggcgcag tcggacgcaa cgcattggac gaagaagaag
    12301 tcgccctcga acttttagac tacctccgcc gccactacct ccctatgctg caagaacgct
    12361 accaagccga caaagacccc agcagccact gggacgacaa ctcgtggctc gaatggatag
    12421 ccaaaaaacg cggcgcagtc ctcagcggcg gacgggtcaa ctaccaaaaa gccgccgaaa
    12481 acatcctcac ggacttccgc gaaggcaaaa tcggcagaat cacccttgaa acaccgaacc
    12541 aatgggaaac ttggcttaaa aaagcacgtc agaaagaagc cgaactcaaa gccattcgcg
    12601 aagccagaaa agcagagcgc aaagggcaga agccttcgga agcataaaga atgccgtctg
    12661 aaaaatattt ttcaggcagc ttctctctac tccaaccgat ttcagacggc atatccaaac
    12721 ccatgccgtt tcagcacgga tacccgtatg accgacaaaa tttctcccga cgcgctgatt
    12781 gaagccgcac tgctgaccca aaccgaaccg ctgaccgaaa aatctatgcg cgaactgtgt
    12841 gtgccgccgt tgtcgcaaga caaactgatt gatgtgttgg cgcagttgaa aacgcgttgg
    12901 caggataggg cgttgcaact ggtgcatacg caggagggct ggcgttttca gattgttcag
    12961 acggcattcg agcggctggg cagcctgcaa gaacagcgtg cgccgcgcta ctcccgcgcc
    13021 gtgatggaaa cactggcgat tatcgcctac cagcagcccg taacgcgcgg cgacatcgaa
    13081 ggtatacgcg gcgtggcggt gtcgcagaac gtgatgcaga ccttgcagga tcgggggtgg
    13141 attgaagtca tcggacatcg ggacacattg ggaaaacccg cattgtgggc aacaacggca
    13201 acttttctca gcgatttgcg cttggacggt ttggaagaac tgccgccgct gaccgaactg
    13261 ggcgaactgg ttttgcccga tttgatagaa atgccgccta cggatgaaga agagccggaa
    13321 accgtaccgt ccgataccct gcccaactga aattccaaat gccgtctgaa acgcacattg
    13381 cttcagacgg cattgcaaca aataagcaga taaaaacaaa cactaagcaa aattaaggaa
    13441 aaacttattt ttaatttaaa aaatcttaga tataattcgt atatctaaag ttgatattgc
    13501 ttttgtcggt agaattgcta aggaatcctc acaatgcttc taacactttc tttgcgtgat
    13561 tttgtcattg tcgaaaatct gaatctggat tttcaaagcg gttttaccgt tttgaccggc
    13621 gagaccggcg cgggcaagtc cattactttg gatgcgattg gtctgctgtt gggcgataag
    13681 gccgattaca gccaagtccg cagcggcgca aaagaagcgc agttgtcggc attgttcgat
    13741 atttcccatt tgcctgcttt aaaagcagaa ttgcgtgaac aagggctgtt ggatgagggc
    13801 gggaaagaac tcagtatccg ccgcattatc gatgccaaag gcaaaagccg cagttttatc
    13861 aacaatcagg cggctacctt ggcgcaactc aaagccgtcg gcgggcagct tatcgacatc
    13921 cacgggcaaa acgaccatca ttcgcttaat caggaagctg cccagcgcga attgttggac
    13981 gcatttgtgg gcggcagggt gcaggcggaa accgtcaggc agctttatca aaactgggcc
    14041 aatgcgaaaa aagccctcca agaggcgcag gaacacgccg atgccgtcat tatcgagcgg
    14101 gagcgtctgg aatggcagtt taacgaactg aatcagttgg acattaaaca aggcgaatgg
    14161 gaagctctca gccaaagcca cgacagcctt gcccattctg ccgaattgtt gcaggccgcc
    14221 gaagaagtcg gaagcaagat tgacggcgac aacggcatcc aacgccatat ctatcaatgt
    14281 caaaaactat tggccaatct gcaaaacatc gagccgcgct ttgccgagag cctgaatatg
    14341 ttggcaagca tcgaggccga attgggcgaa atcagtgcca atatgcgcga tgtggcagga
    14401 cacagtgaca tcaaccccaa tgaattggcg gcacaggaac agcgtatggg tgaactgatg
    14461 gggatggcgc ggaaataccg gattgaaccc gaagagttgc ctgccaagtt ggcagaaatc
    14521 gaagaacgcc tgcaaagtct tcaagctgcc gctgatttgg acgcgctcga gcataatgtt
    14581 gcccacaatt ttgccgaata tcaggaagct gcccacatcc tttctgccat gcgccatcag
    14641 gcggcagggc gtttgagtag cgaaacgacc gagcatatgc aacaccttgc catgaaaggc
    14701 gcgcgtttcg acatcgtcct gttgccttcg tcgccgacgg cacacggttt ggagcaggtt
    14761 caatttcaag ttgccgctaa caaaggcaat ccgccccgcc cgctgaacaa agtcgcctcc
    14821 ggcggcgaat tggcgcgtat cagccttgcc ttacaggttg ttgccagcca atatacccaa
    14881 gttcccaccc tgatttttga tgaggtcgat accggtattg gagggggagt ggctgaaatg
    14941 gtcggcaagg cattacgtgc gttgggcaga aaacatcagg tgcttgccgt tacccatctt
    15001 ccgcaagtcg catcctgcgg agaaaaccac tggcgggtgc gcaagcacag cgagggagag
    15061 caaaccgtca gcgaaatcag tatattggat gaaatacaac ggatcgaaga ggttgcccgt
    15121 atgttgggcg gagaagttat taccgatacg acgcggcaac atgcggcaga attgctgcaa
    15181 cttgcgtcga aaaatagttt attttaaaat caatcagtta caaaaataac tgaaaataga
    15241 agtctaaaat aatagacagg actcagataa atccgtatta tcacgctttc ttaatcactt
    15301 gaacaagtga ttgtgccgca cccgtagctc agttggatag agtatctggc tacgaaccag
    15361 agggtcgggc gttcgaatcg ctccgggtgc gccagtaaga aaatacaata tgcgcccatc
    15421 gtctagcggt taggacatcg ccctttcacg gcggtaaccg gggttcgatt ccccgtgggc
    15481 gtgccaattc aaaatgcctc cgattatatc ggag
//
LOCUS       DAXFZM010000059        14520 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.059, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000059 DAXFZM010000000
VERSION     DAXFZM010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14520)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14520)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14520
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.059"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            79..2085
                     /locus_tag="ACFJAG_001468"
     CDS             79..2085
                     /locus_tag="ACFJAG_001468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific recombinase"
                     /protein_id="HFC3980729.1"
                     /translation="MADMKKITPQNLRPLLSESLGHTDFVNVLNALIKFLRRGGKKCA
                     GERFDLIIDTFKQDRELLSRFSRCFYIWLAQIHIYPALIKLGIFSRHSFAREMGIRIY
                     ERFNPSYKDFANLGEVFLYLFHSENDDKWLQTLNIRQWLVLYELIRSHAEPSKLQTAG
                     IRLADARLRAIEMLSVWTASEAIEPDLIRIAPRLLEADSSFVALQRETAKLVEHYRNG
                     TAPYDTAHLEVMFDQCFSQIDYLRRKGTGAGSGSSVKVAHLLERLRQTVGRLKLLTDI
                     QTGAGNSNRLTIALMNSLIYAAVEQYSTRHLRRSSIRMLARSITENKSHHGEHYITRN
                     RKEYFKMFYSAAGGGGIIALMALLKIRIGTLDLSPFLASLSAGFNYGIGFMIIHMLHC
                     TVATKQPAMTAASFAEQVDLNEGGKAVDNKLSKLLIDVCRSQSVAVFGNVSIAILLAC
                     AISFGYAHLYRLPILDAHTAAYQFKSIDIINHPTLWYAAIAGLWLFCSGIIAGFFDNR
                     ADYLNLRQRLPFNPLLRKIMRPGPRRVLAAYIHKHYGSLVGNFIFGMLLGMTGYFGHL
                     LGLPLDIRHVAFSSANLGYAAVSGNVGFGTFVLGIFSVLAIGLVNLCVSFSLALFVAL
                     RSRGTKIGSIRNLIKSFWNQIKSNPCILFLPPAKGQGHPPSDKP"
     gene            complement(2208..3299)
                     /gene="mltB"
                     /locus_tag="ACFJAG_001469"
     CDS             complement(2208..3299)
                     /gene="mltB"
                     /locus_tag="ACFJAG_001469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase B"
                     /protein_id="HFC3980730.1"
                     /translation="MEKRKILPLAICLAALSACTAMEARTPRANEAQAPRADEMKKES
                     RPAFDAAAVPVSDSGFAANANVRRFVDDEVGKGDFSQAEWQDFFDKAAYKADIVKIMH
                     RPSTSRPWYVFRTGNSGRAKFHGARRFYAENRAVIDDVAQKYGVPAELIVAIIGIETN
                     YGKNTGSFRVADALATLGFDYPRRAGFFQKELVELLKLAKEEGGDVFAFKGSYAGAMG
                     MPQFMPSSYRKWAVDYDGDGHRDIWGNVGDVAASVANYMKQHGWRTGGKMLVSATLAP
                     GADVQAIIGEKTALTRTVADLKAYGIIPGETLADDEKAVLFKLETAPGVFEYYLGLNN
                     FYTVWQYNHSRMYVTAVRDIANSLGGPGL"
     gene            complement(3447..4874)
                     /locus_tag="ACFJAG_001470"
     CDS             complement(3447..4874)
                     /locus_tag="ACFJAG_001470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HFC3980731.1"
                     /translation="MIHTEPSAQPSTMDTAAFLKHIESAFRRIFSDGIDLMRYLPEGK
                     WLALKQAGLLLPFLDKKHGGRKGSQFEIQEVLRIAGHYGVPVTLRTGIEGALVLQPLQ
                     EFGGEAQVAQGLDMIFKGEGGGLGVTEPETSGAAIAREMQSCYEYTDEQTIYVNAAKY
                     WQGNSQSDFLLVAAKERKNGKLAKVIDLLLVPKTYIRCETLASEGLRAVRYAVNRIDA
                     EMPATAVMKLSRGDAAGLRAFQNIFIRSRLQLIGMTHGIMEYILDNLNRYVRNDIRFV
                     DYERREIQRRHQVSEILYRYVCHSVSPVAPVAHQLMEANIVKTLATEYTYAAAQMLQK
                     LLGAKGFERGHPAGNIAIDIRPFTIFEGPNDMLYAEIYDQFVRATAEEKEAGIKLDKN
                     QTLLDRLQTDVRFAAVARDYALPEDIRSFLQEHTLTDACALQKVFIGKIIARLFVFVQ
                     EEHEDTTAFLLNDIRKDILDCRYCG"
     gene            5059..8763
                     /gene="mfd"
                     /locus_tag="ACFJAG_001471"
     CDS             5059..8763
                     /gene="mfd"
                     /locus_tag="ACFJAG_001471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HFC3980732.1"
                     /translation="MTCPIPKPREKSRWFNLSQGSLPLALARYLPHKRLKAVLTQDAE
                     QALRLQTAWRFFRPHDTAVFLPDWETLPYERFSPHQDLVSERLSALWQIKSGAADVLF
                     VPVATAMQKLPPVPFLAGRTFWLKTGQTLDIGRLKTDLVDAGYNHVSHVVAAGEFAVR
                     GGIVDLFPMGSETPYRIDLFDDEIDGIKTFDTDTQRTISPVSEIRLLPAHEFPTDSEA
                     QKIFRSRFREEVDGNPNDAAVYKAVSNGHFGAGVEYYLPLFFENELETLFDYIGEDAL
                     FVSLGDVHAEANRFWNDVKSRYAMAQGDETYPPLLPQHLYLSADVFAGRLKNYGQVLP
                     DVSGKAHSLPDLAVNRQSDDPLQALKDFQTAFDGRILLCAESLGRRETMLGFLQQNGL
                     KAKPVSDWQGFLSAHEPLMITVAPLAYGFKLGGLQSSSQQQTVPASEGEGKAVTDQTE
                     FSASATNPLPSPLPQEREQSAAAVSDGLKAAAVSTESSLYLVASDLHGQTRQQSAPSP
                     VGEGWGEGKAVAAQSAIAVITESDLYQYVARSRVHNRRKKHAAVSDGLLRDLAEINIG
                     DPVVHEEHGIGRYTGLVTMDLGGETNEMMLLEYAGEAQLYVPVSQLHLISRYSGQAHE
                     SVALHKLGSGAWNKAKRKAAEKARDTAAELLNLYAQRAAQSGHKFEINESDYQAFADG
                     FGYEETEDQAAAIAAVIKDLTQAKPMDRLVCGDVGFGKTEVALRAAFVAVMGGKQVAV
                     LAPTTLLVEQHAQNFADRFADFPVKVASLSRFNNSKATKATLEGMADGTVDIVIGTHK
                     LVQDDIKFKNLGLLIIDEEHRFGVRQKEQLKRLRANVDILTMTATPIPRTLSMALEGL
                     RDFSLITTAPSRRLAVKTFVKPFSEGSVREAVLRELKRGGQVFFLHNEVDTIENMRER
                     LETLLPEARIGVAHGQLRERELEQVMRDFLQQRFNVLLCSTIIETGIDIPNANTIIIN
                     RADKFGLAQLHQLRGRVGRSHHQAYAYLLTPEYITKDAEKRLDAIAAADELGAGFTLA
                     MQDLEIRGAGEILGEGQSGEMMQVGFTLYTEMLKQAVRDLKKGRQPDLDAPLGITTEI
                     KLHSPALLPEDYCPDIHERLVLYKRLAVCETVQKINAIHEELVDRFGLTEQPVKTLIE
                     SHHLRLAAKELGIDAIDATSEAVTVTFGKHHCIDPTGIILLIQTDKKYRLAGADKLRF
                     AAEMENIEVRINTVKTVLKTLQGKRLPKGN"
     gene            8989..9291
                     /locus_tag="ACFJAG_001472"
     CDS             8989..9291
                     /locus_tag="ACFJAG_001472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2004 domain-containing protein"
                     /protein_id="HFC3980733.1"
                     /translation="MDAFAAFLSELEKADDAARAALTEYLKRDSRYIDFHTEDTQTSR
                     DAAKFVRTMQLIYISLWAKNPAFAVMDYMPANMESDEILAVKLHLDGSIFSIDWES"
     gene            9453..9836
                     /gene="panD"
                     /locus_tag="ACFJAG_001473"
     CDS             9453..9836
                     /gene="panD"
                     /locus_tag="ACFJAG_001473"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004068 - aspartate 1-decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006523 - alanine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HFC3980734.1"
                     /translation="MFRTILGGKIHRATVTEADLNYVGSITVDQDLLDAAGICPNEKV
                     AIVNNNNGERFETYTIAGKRGSGVICLNGAAARLVQKGDIVIIMSYIQLSEPEIAAHE
                     PKVVLVDGNNKIRDIISYEPPHTVL"
     gene            9858..10700
                     /gene="kdsA"
                     /locus_tag="ACFJAG_001474"
     CDS             9858..10700
                     /gene="kdsA"
                     /locus_tag="ACFJAG_001474"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008676 - 3-deoxy-8-phosphooctulonate
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HFC3980735.1"
                     /translation="MDIKINDITLGNNSPFVLFGGINVLEDLDSTLQTCAHYVEVTRK
                     LGIPYIFKASFDKANRSSIHSYRGVGLEEGLKIFEKVKAEFGIPVITDVHEPHQCQPV
                     AEVCDVIQLPAFLARQTDLVAAMAETGNVINIKKPQFLSPSQMKNIVEKFREAGNGKL
                     ILCERGSSFGYDNLVVDMLGFGVMKQTCGNLPVIFDVTHSLQTRDAGSAASGGRRAQA
                     LDLALAGMATRLAGLFLESHPDPKLAKCDGPSALPLHLLENFLIRIKALDDLIKSQPI
                     LTIE"
     gene            10715..11155
                     /locus_tag="ACFJAG_001475"
     CDS             10715..11155
                     /locus_tag="ACFJAG_001475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4149 domain-containing protein"
                     /protein_id="HFC3980736.1"
                     /translation="MMQTFRKISLYAATLWLGMQIMAGYIAAPVLFKMLPKMQAGEIA
                     GVLFDILSWSGLAVWGTVLAAAFAALTRRQTALLLFLLSALAANQFLVTPVIEALKYG
                     HENWLLSVAGGSFGMWHGISSMTFMATALLSAVLSWRLSGKEAV"
     gene            11202..12488
                     /gene="eno"
                     /locus_tag="ACFJAG_001476"
     CDS             11202..12488
                     /gene="eno"
                     /locus_tag="ACFJAG_001476"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000015 - phosphopyruvate hydratase
                     complex [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004634 - phosphopyruvate hydratase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HFC3980737.1"
                     /translation="MSAIVDIFAREILDSRGNPTVECDVLLESGVMGRAAVPSGASTG
                     QKEALELRDGDKSRYSGKGVLKAVEHVNNQIAQALIGIDANEQSYIDQIMIELDGTEN
                     KGNLGANATLAVSMAVARAAAEDSGLPLYRYLGGAGPMSLPVPMMNVINGGEHANNSL
                     NIQEFMIMPVGAKSFREALRCGAEIFHALKKLCDSKGFPTTVGDEGGFAPNLNSHKEA
                     LQLMVEAAEVAGYKAGEDVLFALDCASSEFYKDGKYHLEAEGRSYTNAEFAEYLEGLV
                     NEFPIISIEDGMDENDWEGWKLLTEKLGKKVQLVGDDLFVTNPKILAEGIEKGVANAL
                     LVKVNQIGTLSETLKAVDLAKCNRYASVMSHRSGETEDSTIADLAVATNCMQIKTGSL
                     SRSDRMAKYNQLLRIEEELAEAAYYPGKAAFYQLGK"
     gene            12656..12934
                     /gene="ftsB"
                     /locus_tag="ACFJAG_001477"
     CDS             12656..12934
                     /gene="ftsB"
                     /locus_tag="ACFJAG_001477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsB"
                     /protein_id="HFC3980738.1"
                     /translation="MKWVTVVLSFALVCCQYSLWFGKGSIGRNSSLREQIAVQEEKNQ
                     TLALRNHSLAAEVYDLENGQEAISEIARVELGYIQDGETFYRLIRHNR"
     gene            complement(12975..13265)
                     /gene="yfaE"
                     /locus_tag="ACFJAG_001478"
     CDS             complement(12975..13265)
                     /gene="yfaE"
                     /locus_tag="ACFJAG_001478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I ribonucleotide reductase maintenance
                     protein YfaE"
                     /protein_id="HFC3980739.1"
                     /translation="MARIGTNKGLFELLEGETLLEGLERTGHMVEYQCRSGYCGSCRV
                     KILEGSVTYREPPLAFLGRDEILPCCCCVEGDVRLDCGLAGEDEGLSDSLLK"
     gene            complement(13386..14519)
                     /gene="nrdB"
                     /locus_tag="ACFJAG_001479"
     CDS             complement(13386..14519)
                     /gene="nrdB"
                     /locus_tag="ACFJAG_001479"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0009263 - deoxyribonucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class Ia ribonucleoside-diphosphate reductase
                     subunit beta"
                     /protein_id="HFC3980740.1"
                     /translation="MSYSTFPKTKNDALKEPMFFGQPVNVARYDQQKYEVFEKLIEKQ
                     LSFFWRPEEIDVSRDRIDYANLPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSI
                     PELETWVETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITARAEDIACYYDD
                     LIEYTQYYNLLGEGVHNVGGKPVTVSLRGLKKKLYLCLMCVNVLEAIRFYVSFACSFA
                     FAERELMEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDPEMAEIAAELQDECFQL
                     FKKAAEQEKEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPI
                     PWINAWLSSDNVQVAPQEVEISSYLIGQIDSEVNTDDLGDFEL"
BASE COUNT         3478 a         4264 c         3619 g         3159 t
ORIGIN      
        1 gcggaaaatg cgccgcccgc cgcagatgcg ccctccccgc catcggggcg tttaacgccg
       61 gattgccgat gcggtacaat ggcagatatg aagaaaatta cccctcaaaa cctgcgtccc
      121 ctgctttcgg aaagcttggg acataccgat tttgtcaacg tcctcaacgc attgattaaa
      181 tttttgcgcc gtggcggcaa aaaatgtgcg ggggagcgtt tcgacctgat tatcgacaca
      241 ttcaaacaag acagggaatt actgtcccgc ttcagccggt gtttttacat ctggctcgcg
      301 caaatacaca tttatccggc actcatcaaa ctcggcattt tctcgcgcca cagctttgcc
      361 cgggaaatgg gcatacgcat atacgaacgc ttcaacccgt catataaaga ttttgccaac
      421 ttgggcgaag tcttccttta tcttttccat tccgaaaacg acgacaaatg gctgcaaacg
      481 ctcaatatcc gccaatggct ggttttatac gaactcatcc gtagccacgc cgagccgtcc
      541 aaattgcaga cggcgggcat ccgccttgcc gatgcgcgtt tgcgcgccat cgaaatgctg
      601 tctgtctgga cggcatccga agccatcgaa cccgatctca tccgtatcgc cccgcgcctg
      661 ctggaagccg attcttcctt cgtcgccctc caacgcgaaa ccgccaaact ggtcgaacac
      721 taccgcaacg gcaccgcgcc ttacgacacc gcccacctcg aagtgatgtt cgaccaatgt
      781 ttcagccaga ttgactattt gcgtcgcaaa gggacgggcg ccggctccgg ttcgtcggtc
      841 aaagtcgccc acctgctcga acgactccgg cagaccgtag gccgtctgaa gctgctcaca
      901 gacatacaaa ccggtgccgg caacagcaac cgcctgacca tcgccctgat gaactccctc
      961 atctacgcgg cggtcgaaca atacagcacc cgccacctgc gccgcagcag catccgtatg
     1021 ctcgcccgca gcattaccga aaacaaaagc caccacggcg aacactacat cacccgcaac
     1081 cgcaaagaat atttcaaaat gttctactcg gcagcaggcg gcggcggcat catcgccctg
     1141 atggcgctgc tcaaaatccg catcggcaca ctcgacctca gtcccttcct cgcttccttg
     1201 tcggctgggt tcaactacgg catcggcttt atgatcatcc atatgctgca ctgcaccgtc
     1261 gccaccaagc agcccgcgat gactgccgcc agctttgccg aacaggtcga tctcaacgaa
     1321 ggcggcaaag cggtggacaa caaactctcc aagctcctca tcgacgtatg ccgctcccaa
     1381 agcgtcgccg tcttcggcaa cgtttccatc gccatccttt tggcgtgcgc catatcgttc
     1441 ggctatgccc atctgtaccg gctgcccata ctcgatgccc acaccgccgc ctaccagttc
     1501 aaatccatag acatcatcaa tcatcctacc ctatggtatg ccgctattgc aggcttgtgg
     1561 ctgttctgct ccggcatcat cgcaggtttt ttcgacaacc gcgccgacta cctcaacctg
     1621 cgccaacgcc tgcccttcaa tcccttgctg cgtaaaatca tgcgccccgg gccccgccgc
     1681 gtcctcgccg cctacatcca caaacactac ggctcgctgg tcggcaactt catcttcgga
     1741 atgctcttgg gtatgaccgg ctatttcgga cacctcctcg ggctgccgct ggacatccgc
     1801 cacgtcgcct tttcctccgc caacctcggc tatgccgccg tcagcggcaa cgtcggcttt
     1861 ggtacattcg tactcggcat tttcagcgtc ctcgccatcg gcttggtcaa cctctgcgtc
     1921 agcttcagcc tcgccctctt cgtcgccctg cgctcgcgcg gcacaaaaat cggcagcatc
     1981 cgcaacctga tcaaaagttt ttggaatcag attaaaagca atccttgcat acttttcctc
     2041 ccgcccgcca aaggacaggg acatcctcct tcggacaaac cttgaccggc aatgccgtct
     2101 gaaacgggat tcaccccgaa taccgccctg atgcgggaaa tccccataaa aggatgcaaa
     2161 aatgccgtct gaaccgaaac gtggttcaga cagcatttta aaaaacatta caatcccggg
     2221 ccgccgagcg aattggcaat gtccctgacc gccgttacat acatccggct gtggttgtac
     2281 tgccataccg tataaaaatt gttcaagccc aaataatatt caaacacgcc gggtgcggtt
     2341 tccagtttga acaaaaccgc cttttcatca tctgcgagcg tttccccggg gatgatgccg
     2401 tacgccttca aatccgccac cgtccgcgtc agggcggttt tttcgccaat gattgcctga
     2461 acatccgcac ccggcgccaa cgtcgccgac accaacattt taccgcccgt gcgccaaccg
     2521 tgctgcttca tataattggc aaccgatgcc gcgacatcac cgacgttgcc ccatatatcc
     2581 cgatgtccgt ccccgtcata atccaccgcc catttccggt agctcgaagg cataaattgc
     2641 ggcataccca ttgcgcccgc atagctgccc ttaaaggcga aaacatcgcc gccttcttct
     2701 tttgccagct ttaaaagctc gaccaattct ttttggaaaa acccggcgcg gcgggggtaa
     2761 tcaaagccta aggtcgccaa tgcgtccgcc acacggaagc tgcccgtatt tttgccgtaa
     2821 ttcgtttcaa tcccgataat cgccacgata agctcggcag gcacgccgta tttttgcgcc
     2881 acatcatcga taaccgcgcg gttttccgca tagaacctgc gcgcgccgtg aaatttcgcc
     2941 ctgcccgaat ttcccgtgcg gaacacatac cacggacgcg atgtggaggg tcggtgcata
     3001 atcttgacga tgtccgcctt gtaagccgct ttgtcaaaaa aatcctgcca ttccgcctgg
     3061 gaaaaatccc ctttcccgac ttcatcgtcc acaaaacggc ggacatttgc attggcggca
     3121 aacccgctgt cggataccgg tacggctgcc gcgtcaaacg cggggcggct ttcttttttc
     3181 atttcatccg cgcggggggc ttgggcttca tttgcccggg gtgtgcgggc ctccatcgcc
     3241 gtacaggcag acaaagccgc caaacaaatt gccagcggca gtatttttct cttttccata
     3301 aacacattcc gaacaaatag ggtaagtggg aaagcggcac aagggtgagg cgcgaaatgc
     3361 ggtatccgcc gcaatcggcg gttttgcaga atgccgcgcg ttgccttttg cgccgcccga
     3421 aatctgcctg ccgccgtatt tgcccgctat ccgcaatatc ggcagtccaa tatatctttg
     3481 cggatgtcgt tcagcaggaa ggctgtggtg tcttcgtgtt cctcctgtac gaagacaaag
     3541 agtcgggcga tgattttgcc gatgaagact ttttgcaggg cgcaggcgtc ggtcagggtg
     3601 tgttcctgca ggaagctgcg gatgtcttcg ggcaaagcgt agtcgcgggc aacggcggca
     3661 aagcggacat cggtttgcag gcggtcgagc agggtttggt ttttgtccaa cttaatgcct
     3721 gcttcttttt cttcggcggt ggcgcggacg aactggtcgt aaatttcggc ataaagcata
     3781 tcgttcgggc cttcaaaaat cgtgaagggg cggatatcga tggcgatatt gccggctggg
     3841 tgtccgcgtt caaaaccctt cgcgcccaag agtttttgca acatttgcgc ggcggcgtaa
     3901 gtgtattccg tggcgagggt tttgacgatg ttcgcctcca tcaattgatg ggcgacgggc
     3961 gcgacgggcg aaacggaatg gcagacgtag cggtaaagga tttcggaaac ctgatggcgg
     4021 cgttggattt cgcggcgttc gtaatcgacg aatctgatat cgttgcggac atatcggttc
     4081 aggttgtcaa ggatgtattc cataatgccg tgcgtcatgc cgatcagttg caggcggctg
     4141 cggataaaga tgttttggaa cgcgcgcaaa ccggcagcgt cgccccggga gagtttcatc
     4201 acggcggttg caggcatttc ggcatcgatg cggttgacgg cgtaacggac ggcgcgcagg
     4261 ccttcggatg cgagggtttc gcagcggatg tatgttttgg ggacgagcag caggtcgatg
     4321 actttggcga gtttgccgtt tttgcgctct ttggcggcaa cgaggaggaa gtcgctttgc
     4381 gaattgccct gccagtattt cgcggcgttg acgtaaatgg tttgttcgtc ggtatattcg
     4441 tagcaggact gcatttcgcg tgcaatcgcc gcgccggagg tttcgggttc ggtaacgccc
     4501 aaaccgccgc cttcgccttt gaaaatcatg tccaaacctt gtgcgacttg cgcttcgccg
     4561 ccgaactctt gcagaggctg caacaccagc gcgccttcga tgccggtacg cagcgtaacg
     4621 ggcacgccgt aatgccccgc aatccttagg acttcttgga tttcaaactg actgcccttg
     4681 cgcccgccgt gttttttgtc gaggaagggc aacagcaaac ccgcctgctt caaggcaagc
     4741 catttgcctt cgggcaggta tcgcatcagg tcgatgccgt ctgaaaaaat gcggcggaat
     4801 gcggattcga tgtgctttaa aaaagcagcc gtgtccatgg ttgacggctg cgcgctcggt
     4861 tcggtgtgta tcatcggctt cctctgtcgg ttcccattaa tcggcggccg gtcaaaccgc
     4921 ctgccacagt ttagagttaa ttttctaaac tttaccacaa agtgcaccgg gcaacaatcc
     4981 gccggccttt cagacggcat cgcgcaccct cacgtgctaa aatgaccgtt tgcatcactg
     5041 tccgccgatt gccgcactat gacctgcccc atccccaaac cccgtgaaaa atcccgttgg
     5101 ttcaatcttt cgcaaggctc gctgcccttg gctttggcgc gttatttgcc gcacaagcgg
     5161 ctcaaagccg tgctgaccca agatgcggaa caggcgttgc gccttcagac ggcatggcgg
     5221 tttttccgtc cgcacgacac ggcggtgttc ctgccggact gggaaacgct gccttacgag
     5281 cgtttttctc cgcatcagga tttggtgtcg gagcggctgt cggcgttgtg gcagattaaa
     5341 agcggcgcgg cggacgtgtt gttcgtaccg gttgccacgg cgatgcagaa gctgccgccc
     5401 gtgccgtttt tggcggggcg cacgttttgg ctgaaaacgg ggcagacttt ggatataggc
     5461 cgcctgaaaa ccgatttggt ggatgcgggc tacaatcatg tttcccacgt tgtcgcggcg
     5521 ggcgagtttg ccgtgcgcgg cggcattgtc gatttgttcc cgatgggcag cgaaacgccg
     5581 taccgcatcg atttgtttga cgatgaaatc gacggcatta aaaccttcga taccgacacg
     5641 cagcgcacca tttcccccgt ttccgaaatc cgcctgctgc cggcgcacga gttccccacc
     5701 gacagcgagg cgcaaaaaat cttccgcagc cgcttccgcg aggaagtcga cggtaatccg
     5761 aacgatgccg ccgtgtacaa agccgtcagc aacggccact tcggcgcggg cgtggaatat
     5821 tatctgccgc tgttttttga aaacgagctg gaaacgctgt ttgactatat cggcgaagat
     5881 gcgctgtttg tctctttggg cgatgttcat gccgaggcaa accgcttttg gaacgacgtt
     5941 aaatcacgtt acgccatggc gcagggcgac gaaacctatc cgcctttgct tccacagcat
     6001 ttgtatctct ctgccgatgt gttcgcaggc cgtctgaaaa actacggaca agttctgcct
     6061 gatgtttccg gcaaggcaca ctccctgccc gaccttgccg tcaaccgcca atccgacgat
     6121 cctttgcagg cattgaagga ttttcagacg gcctttgacg ggcggatttt gctgtgcgcc
     6181 gaaagtttgg gacggcgcga aaccatgctc ggtttcttgc agcaaaacgg tttgaaagcc
     6241 aaacctgtgt ccgactggca gggcttcttg tcggcgcacg agccgctgat gattacggtc
     6301 gcgccgttgg cttacggatt caaactgggc ggactgcaat cttcaagcca acagcaaact
     6361 gttcccgcct ccgagggaga aggcaaagcg gttaccgacc aaaccgaatt ttccgcatcc
     6421 gcaacaaacc ctctccccag ccctctcccg caggagaggg aacaaagtgc cgccgccgtt
     6481 tcagacggcc tgaaagcagc cgccgtttca accgaaagca gcctgtatct cgtcgcaagt
     6541 gatctgcacg ggcaaacccg acagcaatct gccccctccc ccgtggggga gggttgggga
     6601 gagggcaaag cggttgccgc tcaaagtgcc atcgccgtca tcaccgaatc cgatctttac
     6661 caatacgtcg cccgttcgcg cgtccacaac cgccgtaaga aacacgccgc cgtttcagac
     6721 ggcctgttgc gcgaccttgc cgaaatcaat atcggcgatc ccgtcgtgca cgaagaacac
     6781 ggcatcgggc ggtatacggg cttggtaacg atggatttag gcggcgaaac caacgaaatg
     6841 atgttgctcg aatacgcggg cgaagcgcag ctttatgtgc ctgtttcgca actgcattta
     6901 atcagccgct actccggtca ggcgcatgaa agcgtcgccc tgcacaagct cggcagcggc
     6961 gcgtggaaca aagcgaagcg caaagccgcc gaaaaagcgc gcgataccgc cgccgagttg
     7021 ctcaacctct acgcccaacg cgccgcccaa tcgggacaca agtttgaaat caacgagtcg
     7081 gactatcagg cgtttgccga cggcttcggc tacgaggaaa ccgaagacca ggccgccgcc
     7141 atcgccgccg tgattaaaga tttgacgcag gcgaagccga tggaccgact tgtgtgcggc
     7201 gatgtcggtt tcggcaaaac cgaagtcgcc ctgcgcgccg cgtttgtggc ggtgatgggc
     7261 ggcaaacagg tcgccgtact cgccccgacc acgcttctgg tcgagcagca cgcgcaaaac
     7321 ttcgccgacc gtttcgccga tttccccgtg aaagtcgcca gcctttcgcg tttcaacaac
     7381 agcaaagcca ccaaagccac gctcgaaggc atggcggacg gtactgtcga tatcgttatc
     7441 ggtacgcaca aattggtgca ggacgacata aaattcaaaa acttaggttt attgattatc
     7501 gatgaagaac accgcttcgg cgtgcgacag aaagagcagc tcaaacgcct gcgcgccaat
     7561 gtcgacatcc taaccatgac cgccacgccg attccgcgca ccctcagcat ggcgctcgaa
     7621 ggtctgcgcg acttctcgct gattaccact gcaccgagcc gccgcctcgc cgtgaaaacc
     7681 tttgtcaaac cgttcagcga aggcagcgtg cgcgaagccg tgttgcgcga actcaaacgc
     7741 ggaggacagg tatttttcct gcacaatgaa gtagatacga ttgagaatat gcgcgagcgg
     7801 ctggaaaccc tgctgcccga agcccgtatc ggcgtggcgc acggacaact gcgcgagcgc
     7861 gagctggaac aagtcatgcg cgactttttg cagcaaagat tcaatgtgtt gctctgttcc
     7921 accatcatcg aaaccggcat cgacatcccc aacgccaaca ccatcatcat caaccgcgcc
     7981 gacaaattcg ggctggccca actgcaccag cttcgcggac gcgtcggccg cagccaccac
     8041 caagcctacg cctacctgct cacgcccgaa tacattacca aagacgcaga aaaacgcctc
     8101 gacgccatcg cggcggcaga cgaactcggc gcaggtttta ccctcgccat gcaggatttg
     8161 gaaatccgag gcgcaggcga aatcctcggc gaaggacaat ccggcgaaat gatgcaggtc
     8221 ggcttcacgc tctacaccga aatgctcaaa caggccgtgc gcgacctcaa aaaaggccgc
     8281 caacccgacc tcgacgcacc gttgggcatt accaccgaaa tcaaactgca cagcccggca
     8341 ttactgcctg aagactactg ccccgacatc cacgagcgcc tcgtcctcta caaacgcctc
     8401 gccgtatgcg aaaccgtgca gaaaatcaac gccatacacg aagaactcgt cgaccgcttc
     8461 ggcctgaccg aacaacccgt caaaaccctc attgaaagcc accacctgcg gcttgcggca
     8521 aaagaactgg gtattgatgc catcgatgcc acaagtgaag ccgtaaccgt taccttcggc
     8581 aaacaccact gtatcgaccc gacggggatt atcctgctga ttcagacgga taaaaaatac
     8641 cggctggcag gggcagacaa attgaggttt gcagcggaaa tggaaaacat cgaggtcagg
     8701 atcaataccg tcaaaaccgt actaaaaacc ctgcaaggca aacgcctgcc caaaggaaat
     8761 tgatgtaacg atgccgtctg aagaacaccg ttcagacggc atacaatccc ccaatcctca
     8821 ccaaaaggaa caatcatgtc gatttttcac ccctatttcc aacaactgtc caccgaaggt
     8881 tttgacggag aagaagatgt cctctgggaa gacgagctga ccgtcaaagg caatcttgtc
     8941 gaggtattcc tgtaggcaga aaatgaaaac agcctgccaa ccgaaacatt ggatgcattt
     9001 gccgccttcc tgtccgaatt ggaaaaagcc gacgatgctg cacgcgccgc actgacggaa
     9061 tatttgaaac gggacagccg ctatatcgac tttcacaccg aagataccca aacaagccgt
     9121 gatgcggcaa aatttgtccg cactatgcag ttgatctata tcagcttatg ggcaaaaaat
     9181 ccggcttttg ccgttatgga ttatatgccc gccaatatgg aaagcgacga aatccttgcc
     9241 gtcaaactgc atttggacgg cagcattttc tcaatcgatt gggagagttg agccggattg
     9301 ccaatcggca aaaatgaaat gccgtctgaa aacagcttcc ctgcccgaag ccttgccatt
     9361 atgaatttga aggaaactcc actataatac ggcattcaga ttttcagacg gcatcacgcc
     9421 cgtcagaccg cacacaaacc aaaaggaaat acatgttccg tactatactt ggcggaaaaa
     9481 tccaccgcgc caccgtaacc gaagccgatt taaactacgt cggcagcatt accgtcgatc
     9541 aagacctgtt agacgcggca ggcatctgcc ccaacgaaaa agtcgccatc gtcaacaaca
     9601 acaacggcga acgttttgaa acctatacca ttgcagggaa acgcggcagc ggcgtgattt
     9661 gcctgaacgg tgctgcagcc aggctggtac agaaaggcga catcgtcatc attatgtctt
     9721 atatccaact ttccgaaccg gaaatcgccg cacacgaacc caaagtcgtc ttagtggacg
     9781 gaaacaataa aatccgcgac atcatctcct acgagccgcc gcacaccgta ctgtaatccc
     9841 gcaaacggac atcgattatg gatattaaaa tcaacgacat caccctcggc aacaattcgc
     9901 ctttcgtcct attcggcggc atcaacgttt tagaagattt ggattccacc ctccaaacct
     9961 gtgcgcatta cgtcgaagtt acccgcaaac tgggcatccc ctatatcttt aaagcctctt
    10021 tcgacaaggc aaaccgctcg tctatccatt cctatcgcgg cgtaggcttg gaagaaggct
    10081 taaagatttt tgaaaaagtc aaagcagagt tcggcatccc cgtcattacc gacgtacacg
    10141 aaccccatca atgccaaccc gtcgccgaag tgtgcgatgt catccagctt cccgcctttc
    10201 ttgcgcggca gaccgatttg gtggccgcaa tggcggaaac gggcaatgtt atcaacatca
    10261 aaaaacccca gttcctcagc ccttcgcaaa tgaaaaacat cgtggaaaaa ttccgcgaag
    10321 ccggcaacgg gaagctgatt ttatgcgaac gcggcagcag cttcggctac gacaacctcg
    10381 ttgtcgatat gctcggtttc ggcgtgatga aacaaacctg cggcaacctg ccggttattt
    10441 tcgacgttac ccattccctg caaacccgcg atgccggttc tgccgcatcc ggcggtcgtc
    10501 gcgcacaggc tttggatttg gcacttgcag gcatggcaac ccgccttgcc ggcctgttcc
    10561 tcgaatcgca ccccgatccg aaactggcaa aatgcgacgg ccccagcgcg ctgccgctac
    10621 accttttaga aaatttttta atccgcatca aagcattgga cgatttaatc aaatcacaac
    10681 cgattttaac aatcgagtaa cacggtttcg ccttatgatg cagactttcc gaaaaatcag
    10741 cctgtatgcc gcaaccttgt ggctcggtat gcagattatg gcaggttata tcgccgcacc
    10801 ggtgctgttc aaaatgctgc ccaaaatgca ggcgggcgaa attgccggcg tattgttcga
    10861 catcctctct tggagcgggc ttgccgtttg gggcacggta ctggctgccg cctttgccgc
    10921 cctaacccgg cggcaaaccg ccctgctgct ttttttattg tccgcccttg ccgccaacca
    10981 atttttggtt acacccgtta tcgaggcact gaaatacggg catgaaaatt ggctgttgtc
    11041 ggttgcaggc ggatccttcg gaatgtggca cggtatttcc agcatgactt tcatggcaac
    11101 cgccctactt tcagcagttt taagttggcg gctttccggc aaagaggccg tctgaagccc
    11161 tcccattttt tacctccctt cacttcactt ggagaacatt catgagcgca atcgttgata
    11221 ttttcgcccg cgaaattttg gactcgcgcg gcaaccccac agtcgagtgt gatgtattgc
    11281 tcgaatccgg cgtaatggga cgtgcggccg taccgagcgg cgcatccacc ggtcagaaag
    11341 aagctttgga acttcgcgac ggcgacaaat cccgctattc cggcaaaggc gtattgaagg
    11401 cggtcgaaca cgtcaacaac caaatcgccc aagccctcat cggtatcgat gccaacgagc
    11461 aatcttatat cgaccaaatc atgatcgaat tggacggtac tgaaaacaaa ggcaatttgg
    11521 gtgcgaatgc gactttggcg gtctctatgg cggttgcacg cgccgctgcc gaagactcag
    11581 gcctgccgct ttaccgctac ttggggggcg caggtccgat gtccctgccc gtaccgatga
    11641 tgaacgtcat caacggcggc gaacacgcca acaacagcct gaacatccaa gagtttatga
    11701 ttatgcccgt cggcgcaaaa tctttccgcg aagcgttgcg ctgcggtgcg gaaattttcc
    11761 acgccttgaa aaaactgtgc gacagtaaag gcttcccgac cacagtcggc gacgaaggcg
    11821 gtttcgcccc caacctgaac agccacaaag aagccctgca actgatggtc gaagcggccg
    11881 aagtcgccgg ctacaaggcg ggcgaagacg tattattcgc attggactgc gcgtccagcg
    11941 agttctacaa agacggcaaa taccacttgg aagccgaagg ccgctcctac accaacgcgg
    12001 aatttgccga atacttggaa ggcttggtta acgaattccc gattatttcc attgaagacg
    12061 ggatggacga aaacgactgg gaaggctgga aactgctgac cgaaaaattg ggcaaaaaag
    12121 ttcaattggt cggcgacgac ttgttcgtaa ccaatccgaa aattcttgcc gaaggcatcg
    12181 aaaaaggcgt agcaaacgca ttgctggtca aagtcaacca aatcggtact ttaagcgaaa
    12241 ccctgaaagc cgtcgatctg gcaaaatgca accgctacgc cagcgtgatg agccaccgct
    12301 ccggcgaaac cgaagacagt accattgccg acttggcagt cgccaccaac tgtatgcaga
    12361 ttaaaaccgg ttctttgagc cgttccgacc gcatggcgaa atacaaccaa ctgctgcgta
    12421 tcgaggaaga attggcggaa gccgcctact accccggcaa agccgcattc taccaactgg
    12481 gcaaataaat aaaaaagtgg atgtatgttt caacacacag ggcaacacat gaagcgtcgc
    12541 cctgtgtgtt gacctgattt ggaagaggtt acacctctcc caaataaagt ctaattttac
    12601 cgccacgaag gacggacatc cgagtggtgg ggtttcaacc agtaaggaaa cgttgatgaa
    12661 gtgggtaact gtcgttttat ccttcgcact tgtctgttgc caatacagcc tgtggttcgg
    12721 caaaggcagc atcggacgca acagcagtct gagagaacag attgccgttc aagaagaaaa
    12781 aaaccagaca ctcgccctac gcaatcattc ccttgccgcc gaagtctatg atttggaaaa
    12841 cggtcaagaa gccatttcgg aaatcgcccg ggtagaactg ggttatatcc aagacggcga
    12901 aaccttttac cgactcatca ggcataaccg gtaataccgt caaaaagccg tccgaaccaa
    12961 tgttcggacg gcttttattt caacaaactg tcagacagcc cctcatcctc ccccgccaaa
    13021 ccgcaatcca gcctgacatc cccctcgacg caacagcagc acggcagtat ctcgtcccgc
    13081 cccaaaaaag ccaaaggcgg ctcccgataa gtaacgcttc cctccaaaat ctttacccgg
    13141 cacgatccgc aatatccgct tcggcactga tattccacca tatgccccgt ccgttccaag
    13201 ccttccaaca gggtctcacc ctccaagagc tcaaaaaggc ccttattcgt accaatgcgc
    13261 gccatttccg accaatcaaa aataaaagga acaataaccg atcctacctg ctgtttttcc
    13321 catcatacaa cacacaaatg ccgtctgaaa catccggctt cagacggcat tttttcaaaa
    13381 aacatttaca actcaaaatc gcccaagtca tccgtattca cttcagaatc gatttgacca
    13441 atcaaataag aggatatttc cacttcctgc ggcgcgacct gtacgttgtc ggacgacagc
    13501 cacgcattaa tccacggaat cgggttttga tttgcgcctt caaatccggc cggcagcccc
    13561 accgcctgca tacgcagatt ggtaatatat tcgacgtatt gggataagat ttctttgttc
    13621 aaaccgatca tcgaaccgtc tttaaacaaa tatgccgccc attctttttc ctgttccgcc
    13681 gcttttttga agagttggaa acattcgtcc tgcaactcgg cggcaatttc cgccatttcc
    13741 ggatcatcaa cacccgaacg catcagatta agcatatgct gcgtgccggt caggtgcagg
    13801 gcttcatcgc gggcaatcag tttgatgatt ttggcgttgc cttccatcaa ctcacgctca
    13861 gcaaaagcaa acgagcaggc aaatgaaacg tagaaacgga tggcttccaa cacattgacg
    13921 cacatcaggc agagatagag ttttttcttc aacccgcgca aagacacagt aacgggtttt
    13981 ccgccgacat tgtgcacccc ttcgcccaac aggttgtaat attgggtgta ttcgattaaa
    14041 tcatcataat agcaggcaat gtcttcggcg cgggcggtaa tgtattcgtt ttcgacaata
    14101 tcatcaaaca cgaccgacgg atcattcaca atattgcgga tgatgtgggt atagctgcgc
    14161 gagtggatgg tttcgctgaa gctccacgtt tcaacccaag tttccagctc gggaatcgaa
    14221 accaaaggca gcaaggcaac attcggactg cgcccttgga tggaatcgag cagtgtttga
    14281 tatttcagat tgctgatgaa aatatgtttt tcgtgttcgg gcaggttggc gtagtcgata
    14341 cggtcgcgcg acacgtcgat ttcttccggc cgccaaaaaa acgacaattg tttttcaatc
    14401 agtttttcaa atacctcgta tttctgctgg tcataacggg cgacatttac cggctgaccg
    14461 aaaaacatcg gctctttcag cgcgtcgttt ttggttttgg gaaaggtgct gtatgacatg
//
LOCUS       DAXFZM010000060        14156 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.060, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000060 DAXFZM010000000
VERSION     DAXFZM010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14156)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14156)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14156
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.060"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(117..2588)
                     /locus_tag="ACFJAG_001480"
     CDS             complement(117..2588)
                     /locus_tag="ACFJAG_001480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HFC3980741.1"
                     /translation="MKKTCFHCGLDVPENLHLTVRYEGEDRETCCVGCQAVAQSIIDS
                     GLGSYYKRRTADAKKTELPPQEILDQIRLYDLPEVQSDFVETHNGTHEAVLMLSGITC
                     AACVWLIEQQLLRTDGIVRIDLNYSTHRCRVVWDDGKIRLSDILLKIRQTGYTAAPYD
                     AQKIEAANQKERKQYIVRLAVAGLGMMQTMMFALPTYLYGGDIEPDFLQILHWGGFLM
                     VLPVVFYCAVPFYQGALRDLKNRRAGMDTPIAAAIIMTFIAGIYSLATNAGQGMYFES
                     IAMLLFFLLGGRFMEHIARRKAGDAAERLVKLIPAFCHRMPGYPAVQDVRESAVVKLQ
                     AGDIVMVKPGETIPVDGTVLEGNSAVNESMLTGESLPVAKMPSEKVTAGTLNTQSPLI
                     IRTDRTGGGTRLSHIVRLLDRALAQKPRTAELAEQYASSFIFGELLLAVPVFIGWTLY
                     ADAHTALWITVALLVITCPCALSLATPTALAASTGTLAREGILIGGKQAIETLSQTTD
                     IIFDKTGTLTQGNPAVRRIELLGSMTEAQVLAVAQSLEQQSEHPLARTILNCRISGGS
                     VPEIQVGQRLNRIGEGVGAQLTVNGETQVWALGRASYVAEISGKEPQTEGGGSAVYLG
                     SQSGFQAVFYLQDPLKDSAAEAVRQLAGKNLTLHILSGDREEAVAETARALGIAHYRA
                     QAMPEDKLEYVEALQKEGKKVLMIGDGINDAPVLAQADVSAAAAGGTDIARDGADIVL
                     LNEDLRTVAHLLDQARRTRHIIRQNLIWAGAYNIIAVPLAVLGYVQPWIAALGMSFSS
                     LAVLGNALRLHKRGKMPSEKILSEQ"
     gene            complement(2585..3763)
                     /gene="hflX"
                     /locus_tag="ACFJAG_001481"
     CDS             complement(2585..3763)
                     /gene="hflX"
                     /locus_tag="ACFJAG_001481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009347253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HFC3980742.1"
                     /translation="MSGRTGRNSATQAQPERVMLVGVMLDKDDTGSNAARLNGFQTAL
                     AEAVELVKAAGGDSVRVETAKRDRPHTALFVGTGKAAELSEAVAADGIDLVVFNHELT
                     PTQERNLEKILQCRVLDRVGLILAIFARRARTQEGRLQVELAQLSHLAGRLIRGYGHL
                     QSQRGGIGMKGPGETKLETDRRLTAHRINALKKQLANLKKQRALRRKSRESGRIKTFA
                     LVGYTNVGKSSLFNRLTKSGIYAKDQLFATLDTTVRRLYISPACSIILTDTVGFVSDL
                     PHKLISAFSATLEETVQADVLLHVVDAAARNSGQQIEDVENVLQEIHAHDIPCIKVYN
                     KTDLLPSEEQNTGIWRDAAGKIAAVRISVAENTGIDALREAIAEYCAAAPNTDETEMP
                     "
     gene            complement(3769..5049)
                     /locus_tag="ACFJAG_001482"
     CDS             complement(3769..5049)
                     /locus_tag="ACFJAG_001482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HFC3980743.1"
                     /translation="MKSLFIWLLLLGSAAGVFYHTQNQSLPAGELVYPSAPQIRDGGD
                     ALHYLNRIRTQIGLHALAHAPVLENSARRHARYLTLNPEDGHGEHHPDNPHYTAQKLT
                     ERTRLAGYLYNGVHENISTEEEAAESSDSDIRTQQRQVDGLMSAVYHRLSLLDRHTDE
                     AGAAFVRENGKTVLVFNQGNGSFERACAKGRRQPEAGRKYYRNACHNGAAVYADEAMP
                     VTELLYTAYPVGGGALPYFYGERPDPVPEYEITGNPASIDFSEAAGKIAMKSFKLYQG
                     KNEIRPVRVLTAGNDPNGRLTAHQFALFPLKPLEYGTLYTAVFDYVRNGRRAQAKWQF
                     RTRKPDYPYFEVNGGETLAVRKGEKYFIHWRGRWCLEACTRYTYRRQFGNSLSILRHE
                     AGGIVFSVSGMAGSRIRLTPEDSPERGVTLYLQD"
     gene            complement(5201..5926)
                     /locus_tag="ACFJAG_001483"
     CDS             complement(5201..5926)
                     /locus_tag="ACFJAG_001483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyqueuosine reductase QueH"
                     /protein_id="HFC3980744.1"
                     /translation="METQNKPTVTDIDRPILVPPGGHKKVLLHSCCAPCSGEVMEAML
                     ASGIDYTIYFYNPNIHPHKEYMLRKEENMRFAEKFGIPFIDKDDDYENDRKEWFAKAK
                     GMEFEPERGIRCTMCFDMRFEKAAQYAHEHGFPVFTSSLGISRWKNMAQINDCGHRAA
                     APYDDVAYWDFNWRKGGGGARMIEISKRENFYQQEYCGCAYSLRDSNAHRKSQGRIPV
                     KLGVLYYGDESTQYEPAPVRVDK"
     gene            complement(5999..6676)
                     /gene="radC"
                     /locus_tag="ACFJAG_001484"
     CDS             complement(5999..6676)
                     /gene="radC"
                     /locus_tag="ACFJAG_001484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HFC3980745.1"
                     /translation="MSIKQWPEGERPREKLLERGAAALSDAELLAILLRVGTRGMSAV
                     DLARYLLQEFGSLGRLMSAEVGKLSAYKGMGTASFTQFAVVREIGRRILEEELQEEIT
                     LSDPDTVADYLRFHLGQEKVEVSVALLLNRQNQLIAVRELSRGTVAENTIYIREIVKL
                     ALDEYADSLIIAHNHPGGSPEPSQEDIMFTRRLAQAMSLVDVSLLDHFIVTSQTVRSF
                     RQLGLMP"
     gene            6703..6825
                     /locus_tag="ACFJAG_001485"
     CDS             6703..6825
                     /locus_tag="ACFJAG_001485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980746.1"
                     /translation="MPSETDVPTRQISEMPSEPDFSFRRHLYFKTVLRRFFQLD"
     gene            complement(6799..8148)
                     /gene="gshA"
                     /locus_tag="ACFJAG_001486"
     CDS             complement(6799..8148)
                     /gene="gshA"
                     /locus_tag="ACFJAG_001486"
                     /EC_number="6.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004357 - glutamate-cysteine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HFC3980747.1"
                     /translation="MKLPVMSPEHSAQLQAFEAKILSNHAKIEAWFRTQWNAHRPPFY
                     GSVDIRNAGYKISSIDMNLFPGGFNNLNPNFIPLAAVAAQDAVQRACETEKSVLIIPE
                     NHTRNTFYLQNVYALGEIFRSAGCEVRLGSLNPEVTEPAEFETALGDKILLEPLLRTR
                     DRVHLADGFSPCVVLLNNDLSAGIPDILKGIGQTVLPPLHGGWTTRRKTNHFGAYNQV
                     AAEFAKLIDIDEWQINPYFEKIGGLDFQGREGEDALAEAVERVLAKIQAKYDESGIAD
                     KPFVIVKADAGTYGMGVMSVKSSDEVRGLNRKNRNKMAKVKEGLEVSEVIVQEGVYTY
                     ETLNGAVCEPVVYMMDRFVIGGFFRVHEGRGADENLNAGGMVFVPLSNSIPTGNGDNS
                     QEAPEACKRVFEQWDSLGMPRSEKDCDVDNEHNRLYVYGVMARLSLLAASIELEETA"
     gene            8400..9809
                     /gene="leuC"
                     /locus_tag="ACFJAG_001487"
     CDS             8400..9809
                     /gene="leuC"
                     /locus_tag="ACFJAG_001487"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009098 - L-leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HFC3980748.1"
                     /translation="MTAQTLYDKLWNSHVVREEEDGTVLLYIDRHLVHEVTSPQAFEG
                     LKMAGRKLWRIDSVVSTADHNTPTGDWDKGIQDPISKLQVDTLDQNIKEFGALAYFPF
                     MDKGQGIVHVMGPEQGATLPGMTVVCGDSHTSTHGAFGALAHGIGTSEVEHTMATQCI
                     TAKKSKSMLIAVDGKLKAGVTAKDVALYIIGQIGTAGGTGYAVEFGGEAIRSLSMEGR
                     MTLCNMAIEAGARSGMVAVDQTTIDYVKGKPFAPEGEAWDKAVEYWRTLVSDEGAVFD
                     KEYRFNAEDIEPQVTWGTSPEMVLNIGGKVPNPAEETDPVKRSGIERALEYMGLKAGT
                     PLNEIPVDIVFIGSCTNSRIEDLREAAAIAKGHKKAGNVQRVLIVPGSGLVKEQAEKE
                     GLDKIFIEAGFEWREPGCSMCLAMNADRLAPRQRCASTSNRNFEGRQGNGGRTHLVSP
                     AMAAAAAVTGHFTDIRTMA"
     gene            9904..10158
                     /locus_tag="ACFJAG_001488"
     CDS             9904..10158
                     /locus_tag="ACFJAG_001488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980749.1"
                     /translation="MNKLFVTALSALALSACAGTWQGAKQDTARNLDKTQAAAERAAE
                     QTGNAVEKGWDKTKEAVKKGGNAVGRGISHLGKKIENATE"
     gene            10220..10861
                     /gene="leuD"
                     /locus_tag="ACFJAG_001489"
     CDS             10220..10861
                     /gene="leuD"
                     /locus_tag="ACFJAG_001489"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - L-leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HFC3980750.1"
                     /translation="MKAFTKITAIVAPLDRSNVDTDAIIPKQFLKSIKRSGFGPNAFD
                     EWRYLDHGEPGMDNGKRPLNPDFSLNQPRYQGAQILLTRKNFGCGSSREHAPWALDDY
                     GFRAIIAPSFADIFFNNCYKNGLLPIVLTEEQVDRLFKEVEANEGYRLSIDLAEQTLT
                     TPGGETFTFDITEHRKHCLLNGLDEIGLTLQHADKIKAFEEKRRQSQPWLFNG"
     gene            11028..12299
                     /locus_tag="ACFJAG_001490"
     CDS             11028..12299
                     /locus_tag="ACFJAG_001490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HFC3980751.1"
                     /translation="MQQIKFIDLFSGMSGIRKGFEQACRKQSVACECVFTSEIKPAAL
                     EVLKQNYPDEVPYGDITKIETGDIPDFDILLAGFPCQAFSFAGKRLGFEDTRGTLFFD
                     VARILKAKKPKGFILENVEGLVTHDRKDSTQKIGRTLTVILETLEALGYYVSWKVLNA
                     KDFGIPQNRKRIYLTGSLKSKPDLSFETSPSPKLKNILESGLPTESSPFIKKLLKKFP
                     PSELYGKSVKDKRGGKNNIHSWDIELKGAVTEEEKQLLNILLKERRKKKWASEIGIDW
                     MDGMPLTKAQISTFYKHPDLQNILDSLTDKGYLVLEHPKQKIGGQRIKDESLPKGYNI
                     VSGKKSFEINKILDPNDVAPTLVAMDMEHLFVVDNGGLRTLTGKEGLRLFGYPDDYSF
                     DIPKKDRCDLLGNTVAVPVIKAVSERLLHTL"
     gene            12315..13046
                     /locus_tag="ACFJAG_001491"
     CDS             12315..13046
                     /locus_tag="ACFJAG_001491"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009036 - type II site-specific
                     deoxyribonuclease activity [Evidence IEA];
                     GO_process: GO:0090304 - nucleic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NgoBV family restriction endonuclease"
                     /protein_id="HFC3980752.1"
                     /translation="MIKLTAQQIFDKLLDEEKILSANGQIRFFLGDVDIIVKQKDVVG
                     NIIQEWLGGWLRKREIEFDVSTNTQMPPDFFLNKKDRSRELLEVKAFNRNACPGFDIA
                     DFKMYSDEIIHKPYMLDVDYLIFGYDMDDNGNVTIKDLWLKKVWQITRSMDGWAINLQ
                     VKKGVVHKIRPGVWYSINKKNMPMFECLEDFVSAIEETVYQNPATRHNASLWKKKFEE
                     AYKKHYNRSISIPRWHEIAHKYKKK"
     gene            13080..14150
                     /gene="leuB"
                     /locus_tag="ACFJAG_001492"
     CDS             13080..14150
                     /gene="leuB"
                     /locus_tag="ACFJAG_001492"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003862 - 3-isopropylmalate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - L-leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HFC3980753.1"
                     /translation="MTKHIAILRGDGIGPEIVAETVRVLDKFIAQGLDADYEYAPLGG
                     EAYDEYGHPYPEFTQNLCRKADAVLLGAVGSPQYDNLDRPLRPERGLLAIRKDLNLFA
                     NLRPAVLYPELANASTLKPEIVAGLDILIVRELTGDIYFGEPRGIRVLENGEHEGYNT
                     MKYSESEIRRIAHVAFQSAQKRSKKVCSVGKANVLETTELWREIFEEIGKQYPDVELS
                     HMYVDNAAMQLVRAPKQFDVIATGNIFGDILSDEASMLTGSIGMLPSASLDENGKGLY
                     EPSHGSAPDIAGQNKANPLATILSLAMLLRYSLNDEARAQQVENSVQKVLQQGLRTGD
                     IYEEGTKLVSCSEMGDAVLAAL"
BASE COUNT         3362 a         3787 c         3708 g         3299 t
ORIGIN      
        1 tctcaaattt taaacgccaa cgtgtttgag cggtaacaat gcatacttta agtttgtaat
       61 ccttcatcgt ctcatttttg ttttaatcga ctatacgtct aaagcaacgc cgcccgtcat
      121 tgttcggaca gtattttttc agacggcatt ttcccccgtt tgtgaaggcg caaggcattg
      181 cccaaaaccg ccagcgaact gaaactcata cccagtgcgg ctatccacgg ttggacatag
      241 cccaaaacgg caagcggtac ggcgatgatg ttgtacgcgc ccgcccatat caggttttgc
      301 cggataatat ggcgggtgcg ccgcgcctga tcgagcaggt gggcgacggt acgcaaatct
      361 tcgttcaata acacaatgtc cgcgccgtcc ctcgcaatat ccgtcccgcc cgctgcggcg
      421 gcggatacgt ctgcctgcgc caaaacgggc gcgtcgttga tgccgtcgcc tatcatcagc
      481 acttttttcc cttctttttg caaggcttcg acgtattcca gcttgtcttc cggcattgct
      541 tgggcgcggt agtgcgcgat acccaaggca cgggcggttt cagcaactgc ttcttcacgg
      601 tcgccactga ggatgtgcag cgtcaggttt ttgcctgcca actgccgcac tgcctccgcc
      661 gcgctgtctt tgagcgggtc ttgcaggtag aacacggctt ggaaaccgct ttgactgccg
      721 aggtaaaccg cgctgccgcc gccttctgtt tgcggttctt tacctgaaat ttcggcaaca
      781 taggatgccc tccccaatgc ccaaacctgt gtttcgccgt tgacggtcag ttgcgcaccc
      841 acgccttccc cgatgcggtt gaggcgttgt ccgacttgga tttcggggac gctgccgcct
      901 gaaatgcggc agttgagaat ggtgcgcgcg agcgggtgtt cggactgctg ttccaaactt
      961 tgcgccactg ccagcacttg ggcttcggtc atgctgccga gcagttcaat ccggcggaca
     1021 gcgggattgc cttgggtcag cgtgccggtt ttgtcgaaaa tgatgtcggt ggtttgggag
     1081 agggtttcga ttgcctgctt tccgccgatt aaaatacctt cgcgcgccag cgtaccggta
     1141 gaagctgcca gcgcggtcgg cgtggcaagc gacagggcgc aggggcaggt aatgaccagc
     1201 agggcgacgg taatccacaa tgcggtgtgc gcgtcggcgt acagcgtcca accgatgaag
     1261 accgggacgg caagcaggag ctcgccgaat atgaaagatg aggcgtattg ttccgccaac
     1321 tcggcagtgc gcggtttttg cgccaaggcg cggtcgagca ggcggacgat gtgcgacagt
     1381 cgcgtgccgc cgccggtgcg gtcggtgcgt ataatcagag ggctttgcgt gttgagtgta
     1441 cctgcggtta ctttttcaga cggcattttg gcgacgggca ggctctcgcc ggtcagcata
     1501 gattcgttga cggcactgtt tccttccagc accgtgccgt caacggggat ggtttcgccg
     1561 ggtttgacca tcacaatatc gcctgcttgg agtttgacga cggcggattc gcggacatcc
     1621 tgtacggcag gatagccggg catccggtgg cagaaggcgg gtatcagttt caccagcctt
     1681 tcggcggcat cgcctgcctt gcgtcgggca atgtgttcca taaagcgtcc gcccagcagg
     1741 aaaaacagca gcatcgcgat ggattcgaaa tacatcccct gccctgcgtt ggtggcgagg
     1801 ctgtaaatgc cggcgatgaa ggtcatgatg atggcggcgg caatcggcgt gtccataccg
     1861 gcgcggcggt ttttcaggtc gcgcaacgcg ccttgataaa acgggacggc gcaataaaat
     1921 acgacgggca gcaccatcag gaagccgccc caatggagga tctgcaggaa atcgggttcg
     1981 atgtcgccgc cgtaaaggta ggtcggcagc gcgaacatca tcgtctgcat catacccagt
     2041 ccggcaacgg caaggcggac gatgtattgt ttgcgttctt tttggttggc ggcttcgatt
     2101 ttttgcgcgt catagggtgc ggcggtgtag cctgtctgcc ggattttcaa cagaatgtcg
     2161 gagaggcgga ttttgccgtc gtcccagacg acgcggcagc ggtgcgtgct gtaattgagg
     2221 tcgatgcgga cgatgccgtc tgtgcgcaaa agctgctgtt cgatcagcca gacgcaggcg
     2281 gcgcaggtaa tgccgctgag catcagcact gcttcgtgcg tgccattatg ggtttccaca
     2341 aagtcggatt ggacttcggg caggtcgtac aggcggattt ggtcgaggat ttcttggggc
     2401 ggcagttcgg tttttttcgc gtcggcggtg cgtcgtttgt aataactgcc caagccggaa
     2461 tcgatgatgc tttgtgcgac tgcctgacag ccgacgcagc aggtttcgcg gtcttcgcct
     2521 tcgtagcgga cggtcagatg caggttttcg ggaacgtcca gcccgcagtg gaaacaggtt
     2581 tttttcatgg catttcggtt tcgtctgtgt ttggtgcggc ggcacaatac tcggcaatgg
     2641 cttcgcgcag tgcgtctata ccggtatttt cagcaacgga aatgcggacg gcggcaattt
     2701 ttcccgcagc gtcgcgccat atgcccgtgt tttgttcttc agacggcagc aggtcggttt
     2761 tgttgtacac cttgatgcac ggaatatcgt gggcatggat ttcttgcagt acgttttcca
     2821 cgtcttcaat ctgctgcccg ctgttccggg cggcagcatc gacgacgtgc agcagcacat
     2881 cggcttgcac ggtttcttcc aaggtggcgg aaaaggcgga aatcagtttg tgcggcagat
     2941 cgctgacgaa tccgacggta tcggtcagga taatgctgca tgcgggactg atgtacagcc
     3001 gccgcaccgt cgtgtcgaga gtggcgaaaa gctggtcttt cgcatatatg cccgacttgg
     3061 tcagccggtt gaacaggctg gatttgccga cattggtata gccgaccagc gcaaacgttt
     3121 tgattctgcc cgactcgcgg gacttgcggc gcagggcgcg ctgttttttg aggttggcaa
     3181 gctgtttttt caaggcgttg atccgatggg cggttaatcg gcggtcggtt tccagtttgg
     3241 tttcgcccgg ccctttcatg ccgataccgc cgcgctggct ttgcaaatgt ccgtaaccgc
     3301 gtatcaagcg tcccgccaaa tggctcaatt gcgccaactc gacttgcagc ctgccttcct
     3361 gcgtgcgggc gcggcgggcg aaaatcgcca gaatcagccc cactctgtcc aatacgcggc
     3421 attggaggat tttttccaaa ttgcgttcct gcgtgggagt aagttcgtgg ttgaatacga
     3481 ccaaatcaat gccgtctgcg gcaactgctt ccgacagctc cgccgccttg cccgtgccga
     3541 caaacagcgc agtgtgcggg cggtcgcgtt tggcagtctc cacgcgtacg gaatcgccgc
     3601 ccgccgcctt gaccagctcg acggcttccg ccaatgccgt ctgaaaaccg ttcagacggg
     3661 cggcattgct gcccgtatca tctttatcca acattacgcc caccagcatg acgcgttccg
     3721 gttgcgcctg agtggcactg ttccgtcctg ttctacctga cataactgtc aatcctgcaa
     3781 ataaagggtt acaccgcgtt ccgggctgtc ttccggagta agcctgatgc ggcttcccgc
     3841 cattccgctg acgctgaaga caatgccgcc cgcttcgtgc cggagtatgg acaggctgtt
     3901 gccgaactgc cgccggtagg tataacgggt acacgcttcc agacaccagc gtccgcgcca
     3961 gtggatgaaa tatttttcgc cttttctaac cgcaagtgtc tcgccgccgt ttacctcaaa
     4021 ataagggtaa tcgggttttc gggttctaaa ctgccatttc gcctgcgcgc gccgtccgtt
     4081 gcggacatag tcgaataccg ccgtataaag cgtgccgtat tccaaaggtt tgagcgggaa
     4141 aagggcgaat tggtgcgcgg tcagcctgcc gttagggtcg ttgccggcgg ttaaaaccct
     4201 gacggggcgg atttcgtttt taccctgata cagcttgaaa cttttcatcg caattttgcc
     4261 tgccgcctcg gaaaaatcaa tgctggcagg attgcctgtg atttcatatt ccggcacggg
     4321 gtcgggacgt tccccgtaaa aataaggcag cgcgccgccg ccaaccggat aggcggtata
     4381 aagcaattcc gttacgggca tggcttcgtc agcataaacg gccgcaccgt tgtggcaagc
     4441 gttgcggtaa tatttccgtc ctgcttccgg ctgccgcctt ccttttgcac aggcgcgctc
     4501 gaagctgccg ttgccctgat tgaatacgag gacggttttg ccgttttcgc gcacaaatgc
     4561 cgcacctgct tcgtcggtat ggcggtcaag cagcgaaagg cggtgataga cagcactcat
     4621 caatccgtct acttggcgtt gctgcgtgcg gatgtcgctg tcggacgatt cggcggcttc
     4681 ctcttccgtg ctgatgtttt catgcacgcc gttgtagaga tacccggcaa ggcgtgtgcg
     4741 ttcggtcagc ttttgtgcgg tgtagtgcgg attgtcggga tggtgttccc cgtgtccgtc
     4801 ttcgggattg agcgtgagat agcgtgcgtg cctgcgggcg gaattttcca aaaccggcgc
     4861 gtgtgccagc gcgtgcaaac cgatttgtgt gcggatgcgg ttgaggtagt gcagcgcatc
     4921 gccgccgtcc ctgatttgcg gtgcggacgg atagacaagt tcgcccgcgg gcagggattg
     4981 gttttgggta tggtagaaaa cgcctgccgc cgagcccaat agaagcagcc aaataaaaag
     5041 ggatttcata atgccgccct cccgacgcgg caacggggtg ttttatcaaa acggcaaact
     5101 tgccaatgcg gtttccgctt gccgattgcc aaaccggcaa acctttcccg tgccggtgcc
     5161 gaacccgatg ccgtctgaac cttcagacgg catcgggtgt ttatttgtcc actcggacgg
     5221 gtgcaggttc gtattgtgtc gattcgtcgc cgtaatacag cacgccgagt ttgacgggga
     5281 tgcgtccctg cgatttgcgg tgggcgttgg aatcgcgcaa ggaataggcg cagccgcagt
     5341 attcctgctg gtagaagttt tcgcgtttgc tgatttcaat catacgcgcg ccgccgccgc
     5401 ctttgcgcca gttgaagtcc caataggcca catcatcgta aggcgcggcg gcacggtgtc
     5461 cgcagtcgtt gatttgcgcc atatttttcc agcgtgaaat gcccagcgaa ctggtaaaga
     5521 cgggaaaacc gtgttcgtgc gcgtattgcg ccgctttttc aaaacgcata tcgaaacaca
     5581 tggtgcagcg gatgccgcgt tccggctcaa actccatgcc tttggctttg gcaaaccatt
     5641 ctttgcggtc gttttcgtag tcgtcgtctt tatcgatgaa agggatgccg aacttttccg
     5701 caaagcgcat gttttcctct tttcggagca tatactcttt gtgcggatgg atattgggat
     5761 tgtaaaaata aatggtgtag tcgatgccgg aggcaagcat ggcttccatc acttcgccgc
     5821 tgcacggggc gcagcaggaa tgcagcaaga cttttttatg tccgccgggc gggacgagta
     5881 tggggcggtc aatgtcggta acggtaggtt tgttttgtgt ttccattaac ttaacaatat
     5941 ctgtcgaata cggtcaaagc ggctatttta ccagagccgc cgaatgtaaa acagggtgtc
     6001 agggcatcag cccgagctgc ctgaacgaac ggacggtttg cgaggtaacg ataaaatggt
     6061 cgagcagcga aacatcaacc agcgacatgg cctgtgccag ccgccttgtg aacatgatgt
     6121 cttcctgcga aggttcgggc gagccgcccg gatggttgtg cgcgataatc aggctgtcgg
     6181 catattcgtc caatgccagt ttgacgattt cgcggatgta aatcgtgttt tccgcaaccg
     6241 taccgcgcga cagctctctg accgcaatca gttggttttg gcggttcagc agcagcgcga
     6301 cgctgacttc gactttttcc tgccccaaat gaaagcgtaa ataatcggca acggtatcgg
     6361 gatcggataa ggtaatttct tcctgcaatt cttcctccaa tatccgccgc ccgatttccc
     6421 tgaccacggc gaactgtgtg aaacttgccg tccccatccc tttgtatgcc gacagtttgc
     6481 cgacctccgc gctcatcagc ctccccaagc tgccgaactc ctgcaatagg tagcgcgcca
     6541 aatcgaccgc gctcatcccg cgcgtcccga cgcgtaaaag gattgccaaa agttcggcat
     6601 cgctcaaagc cgccgccccg cgttccaaca gcttttccct gggcctttcg ccttccggcc
     6661 attgcttgat gctcatgttt tccctttttt aaatagtctg agatgccgtc tgaaacagat
     6721 gttcccacac gccaaatatc cgaaatgccg tctgaaccgg atttcagctt cagacggcat
     6781 ctgtatttca aaacagtctt acgccgtttc ttccaactcg attgaagccg ccaaaagcga
     6841 cagacgtgcc attacgccgt aaacgtagag gcggttatgt tcgttgtcca cgtcgcagtc
     6901 tttttcagaa cgcggcatac cgagcgaatc ccattgttcg aatacgcgtt tgcaggcttc
     6961 tggagcttct tgcgaattat cgccgttacc ggtaggaatg ctgttggaca gcggcacaaa
     7021 caccataccg ccggcgttga ggttttcgtc cgcaccgcgc ccttcgtgta cgcggaaaaa
     7081 gccgccgatg acgaaacggt ccatcatata gacgacgggt tcgcacaccg cgccgttcaa
     7141 ggtttcatag gtataaaccc cttcttggac aatcacttcg ctgacttcca agccctcttt
     7201 caccttcgcc attttgttgc ggtttttgcg gttcaagccg cgcacttcgt cggaggattt
     7261 gacgctcatc acacccatgc cgtaagtgcc ggcatcggct ttgacgatga cgaaaggttt
     7321 gtcggcaatg cccgattcgt cgtatttggc ttgaattttc gccagcacgc gttctaccgc
     7381 ttccgccagc gcatcttcac cttcgcgccc ttggaagtcc aaaccgccga ttttttcaaa
     7441 atacgggttg atctgccatt catcgatgtc aatcagcttg gcaaattcgg cggcaacttg
     7501 gttgtacgcg ccgaaatgat ttgttttgcg gcgcgtcgtc caaccgccgt gcagcggcgg
     7561 caaaacggtt tggccgatgc ctttgagaat gtcgggaatg ccggcggaca aatcgttgtt
     7621 caacaaaacc acgcaaggcg aaaagccgtc ggcaaggtgg acgcggtcgc gggttcgcag
     7681 caaaggctca agcaggattt tgtcgcccaa tgcagtttca aattcggccg gttcggttac
     7741 ttccggattc aggctgccca agcgcacttc acaccctgcc gaacggaaaa tctcgccgag
     7801 ggcgtaaacg ttttgcaggt aaaacgtatt gcgcgtgtgg ttttcgggaa taatcaatac
     7861 ggatttctcc gtttcgcagg cgcgttgcac cgcatcttgc gcggcaaccg ccgccagcgg
     7921 gatgaaattc ggattcagat tattgaagcc gcccggaaac aaattcatat cgatagacga
     7981 aattttgtaa ccggcgttgc gtatatcgac cgaaccgtaa aacggcgggc ggtgcgcgtt
     8041 ccactgcgtg cggaaccacg cctcgatttt ggcgtgattg gacaggattt ttgcctcaaa
     8101 cgcctgaagt tgcgccgaat gttcgggcga cataaccggt aatttcatct ttcgtctgcc
     8161 tctgtgtgtt ttttgacaag gtacagataa taatgctttt gaaagaatga cgacaagtat
     8221 tctttcgtat cgaatcattc tttagatata acgaaatgaa caatatgtct aattttttcg
     8281 ttaaaattgt ttacaaaata acaccgactc aaaaattaga caaaatctgt tgcgcagtat
     8341 aaagaatacg tctaaaatcc gcccaatccg catcaccatt tatccaaaag aacaacatca
     8401 tgacggcaca aaccctctac gacaaactct ggaacagcca cgtcgtccgc gaagaagaag
     8461 acggcaccgt cctgctttac atcgaccgcc atctggttca cgaagtaacc agcccgcagg
     8521 cgtttgaagg tctgaaaatg gcggggcgca agctgtggcg catcgacagc gtggtctcca
     8581 ccgccgacca caacaccccg accggcgatt gggacaaagg catccaagac ccgatttcca
     8641 agctgcaagt cgatacgttg gatcaaaaca tcaaagagtt tggcgcactc gcctacttcc
     8701 cgtttatgga caaaggccag ggcatcgtac acgttatggg gcccgaacaa ggcgcgaccc
     8761 tgcccgggat gaccgtcgtc tgcggcgatt cgcacacttc cacccacggc gcattcggcg
     8821 cactggcaca cggcatcggc acttccgaag tcgaacacac gatggcgacc cagtgcatta
     8881 ccgcgaaaaa atccaaatct atgctgattg ccgttgacgg caaattaaaa gcgggcgtta
     8941 ccgccaaaga cgtggcgctc tacatcatcg ggcaaatcgg cacggcgggt ggcacgggtt
     9001 acgccgtcga gttcggcggc gaagccatcc gcagcctttc gatggaaggc aggatgaccc
     9061 tgtgcaatat ggcgattgag gcaggcgcgc gttccggtat ggttgccgtc gatcaaacca
     9121 ccatcgacta tgtcaaaggc aagcccttcg cacccgaagg cgaagcttgg gacaaagccg
     9181 tcgagtactg gcgcacgctg gtgtctgacg aaggcgcggt ttttgataaa gaataccgtt
     9241 tcaacgccga agacatcgaa ccgcaagtta cttggggcac gtcgcccgaa atggttttaa
     9301 acatcggcgg caaagtgccg aatcccgccg aagaaaccga tccggtcaaa cgcagcggca
     9361 tagagcgcgc actcgaatat atgggtttga aggccggtac gccgctgaac gaaatccctg
     9421 tcgatatcgt ctttatcggc tcttgcacca acagccgcat cgaagacttg cgcgaagccg
     9481 ctgctatcgc caaaggccat aaaaaagccg gcaacgtaca gcgcgtgtta atcgtccccg
     9541 gctccggttt ggttaaagaa caagccgaaa aagaaggctt ggacaaaatt ttcatcgaag
     9601 ccggttttga atggcgcgaa ccgggctgtt cgatgtgcct tgcgatgaat gccgaccgcc
     9661 tcgcgccgag gcaacgctgc gcctccacgt ccaaccgcaa ttttgaaggc cgccaaggca
     9721 acggcgggcg cacccacctc gtcagccccg ctatggccgc cgccgccgcc gttaccggac
     9781 actttaccga catccgcacg atggcgtaag tattttcagg cggtctttaa gaatttgacg
     9841 aggccgtctg aaatatgtcc cgtaaggcag aaacacctaa tattcaaacc aaggagttta
     9901 accatgaaca aacttttcgt taccgccctg tccgccctcg ccttgtccgc ctgcgccggc
     9961 acttggcagg gcgcgaaaca agacaccgcc cgcaaccttg acaaaacaca ggccgccgcc
    10021 gaacgcgccg ccgaacaaac aggcaacgcc gtcgaaaaag gttgggacaa aaccaaagaa
    10081 gccgtcaaaa aaggcggcaa tgccgtcgga cgcggcattt cccatctcgg caaaaaaatc
    10141 gaaaacgcca ccgaataacc gatttgcgat gccgtctgaa accgtttcag acggcatcgt
    10201 cagcacaaga cgcaaaccca tgaaagcctt taccaaaatc accgccatcg tcgccccgct
    10261 cgaccgcagc aacgtcgata ccgatgccat catccccaaa caatttctga aatccatcaa
    10321 acgcagcggc ttcggcccca acgcctttga cgaatggcgt tacctcgacc acggcgaacc
    10381 gggcatggac aacggcaaac gcccgttgaa ccccgatttt tccctgaacc agccgcgtta
    10441 ccaaggcgcg caaatcctgt tgacgcgtaa aaacttcggt tgcggctctt cacgcgaaca
    10501 tgccccttgg gcattggacg actacggctt ccgcgccatt atcgccccca gcttcgccga
    10561 catcttcttt aacaactgct acaaaaacgg ccttttgccc atcgtgttga ccgaagaaca
    10621 agtcgaccgg cttttcaaag aagtcgaagc caacgaaggc tatcggctct ccatcgacct
    10681 tgccgagcaa accctgacca ccccgggcgg cgaaacattc acattcgaca ttaccgaaca
    10741 ccgcaaacac tgcctcttaa acggcttgga cgaaatcgga ctgaccctgc aacacgccga
    10801 caaaattaaa gcctttgaag aaaaacgccg ccaaagccag ccttggctgt ttaacggtta
    10861 aaacctatgc cgtctgaagg ctgttcagac ggcattcctg ataacatata attgctgcgg
    10921 ctaatgtaaa cagaggggcg ataaattgtt ttcatctttt aagcgggctt agcaacactc
    10981 taaattaatg caactctcca tttcaaataa atttttagat ttttaatatg caacaaatta
    11041 aatttattga cttattttcc ggaatgagtg gcatcaggaa aggattcgaa caagcctgtc
    11101 ggaaacagtc ggttgcttgc gaatgtgttt ttacttcaga aatcaaaccg gcagctttgg
    11161 aagtattgaa gcaaaactac cctgatgaag tgccgtatgg agatataacg aaaattgaaa
    11221 caggggatat tcccgatttt gacatcctgt tggcaggctt cccttgtcag gctttttctt
    11281 tcgccggaaa aagattaggc tttgaagata cacggggaac gcttttcttt gatgtggcaa
    11341 ggattttaaa ggcaaaaaaa ccaaaaggtt ttattttgga aaatgtggaa ggattggtga
    11401 cacacgatag aaaagattcg acacaaaaaa tagggcgcac cctgaccgtt attttggaaa
    11461 ccttggaagc attgggctac tatgtttctt ggaaagtttt aaatgcaaaa gatttcggca
    11521 ttccccaaaa caggaagcgc atttatctga caggcagttt gaaatccaaa cccgacttat
    11581 ctttcgaaac aagcccaagt ccgaaattaa aaaatatttt ggaatcggga ctgcctactg
    11641 aaagcagccc tttcatcaaa aaattgctaa aaaaatttcc cccgtccgaa ctgtacggaa
    11701 aatcagtaaa agacaaacgg ggagggaaaa acaatattca cagttgggat attgaattaa
    11761 aaggcgcagt aaccgaagaa gagaagcaat tgttaaatat ccttctaaaa gaacggagga
    11821 aaaaaaaatg ggcttcagaa atcggcatag attggatgga tgggatgcct ttgacaaaag
    11881 cgcaaatttc aactttctat aaacaccccg atctccaaaa tattttggac agcctgacag
    11941 acaaaggcta tttggtttta gagcatccga aacaaaaaat tggcgggcaa agaatcaaag
    12001 atgaatccct gcccaaaggc tacaatattg tttcaggtaa aaaatctttt gaaatcaata
    12061 aaatattaga tccaaacgat gttgcgccaa ccttggttgc aatggatatg gagcaccttt
    12121 tcgtcgttga caacggcggt ttgcgtacac ttaccggaaa agaagggtta cgcttattcg
    12181 gctatccgga cgattattcg tttgatattc ccaaaaaaga cagatgcgat ttattgggta
    12241 ataccgttgc cgtccctgtg attaaggcgg tatctgaaag acttctgcat actttataaa
    12301 ccgacaggga taaaatgata aaacttactg cacaacaaat atttgataag ttgctggatg
    12361 aagaaaaaat cttatcggcc aatggtcaaa ttagattttt cttaggagat gtggatatta
    12421 tcgtcaaaca aaaagatgtt gtcggcaaca tcattcagga atggctcggc ggatggttga
    12481 gaaaaaggga aattgaattt gatgtttcaa ccaataccca aatgcctccc gatttctttt
    12541 taaataaaaa agaccgcagc agagaattgt tggaagtaaa ggcgttcaac cgaaatgcct
    12601 gcccgggttt tgatattgca gattttaaaa tgtattctga tgaaatcatt cataagccct
    12661 atatgctgga tgtagattat ttaatattcg gttacgatat ggacgacaac ggcaatgtaa
    12721 ccatcaagga tttatggctt aaaaaagtat ggcaaattac cagaagcatg gatgggtggg
    12781 caattaatct tcaagtcaaa aaaggcgtgg tgcataaaat ccgcccgggt gtttggtaca
    12841 gcataaataa aaagaatatg cctatgtttg aatgcttgga agattttgtt tccgcaattg
    12901 aagaaaccgt ttatcaaaac ccggcaacac ggcataacgc atccttatgg aaaaagaaat
    12961 ttgaggaagc ttataaaaaa cactacaacc gatcgatttc cataccccgt tggcacgaaa
    13021 ttgcacacaa atacaaaaag aaataaccct tcaaccatca acccataagg aaacttgaaa
    13081 tgaccaaaca tatcgccatc ctccgaggcg acggcatcgg tcccgaaatc gtcgccgaaa
    13141 ccgtccgcgt actcgacaaa tttatcgccc aaggcttgga tgccgactac gaatacgcgc
    13201 ctttgggcgg cgaagcctac gacgaatacg gccatcctta tccagaattt acgcaaaacc
    13261 tctgccgcaa agccgatgcc gtcctgcttg gtgcagtcgg ttcgccccaa tacgacaatc
    13321 tcgaccgtcc gttgcgcccc gagcgcggct tgttagcaat tcgtaaggat ttgaacctgt
    13381 ttgccaattt gcgtcctgcc gttttatatc ccgaattagc caacgcctcc acgctcaagc
    13441 ctgaaatcgt tgccggtttg gatattttga ttgtgcgcga acttaccggc gatatttatt
    13501 tcggcgaacc gcgcggcatc cgtgttttgg aaaacggcga acacgaaggc tacaacacca
    13561 tgaaatacag cgaaagcgaa atccgccgca tcgcccacgt ggccttccaa tccgcccaaa
    13621 aacgcagcaa aaaagtctgc tccgtaggca aagccaacgt tttggaaacc accgaactgt
    13681 ggcgcgaaat ctttgaagaa atcggcaaac aatatcccga tgtcgagctt tcccatatgt
    13741 atgtggacaa tgccgccatg caactcgtgc gcgcgcccaa acagtttgac gtgattgcca
    13801 ccggcaacat cttcggcgac atcctctccg acgaagcctc catgctgacc ggctccatcg
    13861 gtatgctgcc ttccgcttct ttggacgaaa acggcaaagg cctgtacgaa ccgtctcacg
    13921 gctccgcccc cgacatcgcc ggacaaaaca aagccaaccc gctggccacc atcctctcgc
    13981 ttgccatgct gctgcgttac agcctgaacg acgaagcgcg cgcgcaacaa gtcgaaaact
    14041 ccgtccaaaa agtgctgcaa caaggcttgc gtaccggcga tatttacgaa gaaggcacaa
    14101 aactcgtttc ctgctccgaa atgggcgacg cggtactcgc cgccttgtaa aaaaca
//
LOCUS       DAXFZM010000061        13909 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.061, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000061 DAXFZM010000000
VERSION     DAXFZM010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13909)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13909)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13909
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.061"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            243..1118
                     /gene="prpB"
                     /locus_tag="ACFJAG_001493"
                     /pseudo
     CDS             243..1118
                     /gene="prpB"
                     /locus_tag="ACFJAG_001493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003779818.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0046421 - methylisocitrate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0019629 - propionate catabolic process,
                     2-methylcitrate cycle [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="methylisocitrate lyase"
     gene            1203..2351
                     /gene="prpC"
                     /locus_tag="ACFJAG_001494"
     CDS             1203..2351
                     /gene="prpC"
                     /locus_tag="ACFJAG_001494"
                     /EC_number="2.3.3.16"
                     /EC_number="2.3.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050440 - 2-methylcitrate synthase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-methylcitrate synthase"
                     /protein_id="HFC3980754.1"
                     /translation="MTETTQTPTFKPKKSVALSGVAAGNTALCTVGRTGNDLSHRGYD
                     ILNLAQKCEFEEVAHLLIHGHLPNKFELAAYKTKLKSMRGLPIRVIKVLESLPAHTHP
                     MDVMRTGVSMLGCVHPERESHPDSEARDIADKLIASLGSILLYWYQYSHNGKRIEVES
                     DEETIGGHFLHLLHGKRLTESQVKAMHVSLILYAEHEFNASTFTARVIAGTGSDMYSC
                     ITGAIGALKGPKHGGANEVAYDIQKRYRNADEADIRERIGRKEIVIGFGHPVYTISDP
                     RNVVIKEVARGLSREAGDMRLFDIAECLESVMWEEKKMFPNLDWFSAVSYQKLGVPTA
                     MFTPLFVISRTTGWSAHVLEQRKDGKIIRPSANYTGPEDLAFVEIEER"
     gene            2503..3291
                     /locus_tag="ACFJAG_001495"
     CDS             2503..3291
                     /locus_tag="ACFJAG_001495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004464335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HFC3980755.1"
                     /translation="MEDLYIILALGLVAMIAGFIDAIAGGGGLITLPALLLAGIPPVS
                     AIATNKLQAAAATFSATVSFARKGLIDWKKSLPIAAASFAGGVVGALSVSLVSKDILL
                     AVVPVLLIFVALYFVFSPKLDGSKEGKARMSFFLFGLTVAPLLGFYDGVFGPGVGSFF
                     LIAFIVLLGCKLLNAMSYTKLANVACNLGSLSVFLLHGSIIFPIVATMAVGAFVGANL
                     GARFAVRFGSKLIKPLLIVISISMAVKLLIDERNPLYQMIVSMF"
     gene            3368..5973
                     /gene="acnD"
                     /locus_tag="ACFJAG_001496"
                     /pseudo
     CDS             3368..5973
                     /gene="acnD"
                     /locus_tag="ACFJAG_001496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258073.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0047456 - 2-methylisocitrate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0019679 - propionate metabolic process,
                     methylcitrate cycle [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Fe/S-dependent 2-methylisocitrate dehydratase
                     AcnD"
     gene            6089..7251
                     /gene="prpF"
                     /locus_tag="ACFJAG_001497"
                     /pseudo
     CDS             6089..7251
                     /gene="prpF"
                     /locus_tag="ACFJAG_001497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004464330.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0019629 - propionate catabolic process,
                     2-methylcitrate cycle [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="2-methylaconitate cis-trans isomerase PrpF"
     gene            7563..8762
                     /locus_tag="ACFJAG_001498"
     CDS             7563..8762
                     /locus_tag="ACFJAG_001498"
                     /EC_number="2.7.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008776 - acetate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006085 - acetyl-CoA biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HFC3980756.1"
                     /translation="MSDQLILVLNCVSSSLKGAVIDRKSGSVVLSCLGERLTTPEAVI
                     TFNKDGNKRQVPLSGRNCHAGAVGMLLNELEKHGLHDRIKAIGRRIAHGGEKYHESVL
                     IDQDVLDELKACIPFAPLHNPANISGILAAQEHFPGLPNVGVMDTSFHQTMPERAYTY
                     AVPRELRKKYAFRRYGFHGTGMRYVAPEAARILGKPLEDIRMIIAHLGNGASITAVKN
                     GKSVDTGMGFTPIEGLVMGTRCGDTDPGVYSYPTFHAGMDVAQVDEMLNEKSGFPGIS
                     ELPNDCRTLEIAADEGREGARLALEVMTYRLAKYIASMAVACGSVDALVFTGGIGENS
                     RNIRAKTVSYLDFLGLHIDTKANMEKRYGNSGIISPTDSSPAVLVVPTNEELMIACDT
                     AELAGIL"
     gene            8873..9493
                     /locus_tag="ACFJAG_001499"
     CDS             8873..9493
                     /locus_tag="ACFJAG_001499"
                     /EC_number="2.7.7.87"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003680049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003725 - double-stranded RNA binding
                     [Evidence IEA];
                     GO_function: GO:0061710 - L-threonylcarbamoyladenylate
                     synthase [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HFC3980757.1"
                     /translation="MAQFFAVHPDNPQERLIKQAVEIINQGGVVVYPTDSCYALGCKL
                     GDKAAMERILSIRKIDLKHHLTLMCADLSELGTYAKIDNVQFRQLKAATPGPYTFILQ
                     ATKDAPARALHPKRKTIGLRIPDNAVAQALLEELGGPLLSCTLMLPEDGEPLTDPYEI
                     RERLEHAVDLVIDGGWCGTDPTTVIDMTDGTELVRRGFGDTAVFGL"
     gene            complement(9517..9645)
                     /locus_tag="ACFJAG_001500"
     CDS             complement(9517..9645)
                     /locus_tag="ACFJAG_001500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980758.1"
                     /translation="MPPKPAFGRHFVCRFKRIFRPGAIRAGISGCRRQGARCRLNG"
     gene            complement(9655..10098)
                     /locus_tag="ACFJAG_001501"
     CDS             complement(9655..10098)
                     /locus_tag="ACFJAG_001501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HFC3980759.1"
                     /translation="MYLTQHTDYGLRVLIYTAVNDDALVNIATIASTYGISKSHLMKV
                     VTALVKGGFLHSVRGKGGGLRLAAPPERINIGAVVRHLEPMQLVECMGPNNECLITPS
                     CRLTGILGGAMKSFFTYLDGFTLQDLLNKPTYDLLYESKIPIAVR"
     gene            10272..10640
                     /locus_tag="ACFJAG_001502"
     CDS             10272..10640
                     /locus_tag="ACFJAG_001502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HFC3980760.1"
                     /translation="MKPLKRHSALVGLSREHHHSLSLCVRMLRTPGADHRAELELHFA
                     ELETHFREEEAKFAPIWQNVAPELKTRFEGDHAKLRQMMASPECGNAAWNTAFATTLR
                     DHARFEERELFPAVEPFLPA"
     gene            10685..11839
                     /locus_tag="ACFJAG_001503"
     CDS             10685..11839
                     /locus_tag="ACFJAG_001503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NnrS family protein"
                     /protein_id="HFC3980761.1"
                     /translation="MKFTKHPVWAMAFRPFYSLAALYGALSVLLWGFGYTGTHELSGF
                     YWHAHEMIWGYAGLVVIAFLLTAVATWTGQPPTRGGVLVGLTAFWLAARIAAFIPGWG
                     AAASGILGTLFFWYGAVCMALPVIRSQNRRNYVAVFAIFVLGGTHAAFHVQLHNGNLG
                     GLLSGLQSGLVMVSGFIGLIGMRIISFFTSKRLNVPQIPSPKWVAQASLWLPMLTAIL
                     MAHGVMPWLSAAFAFAAGVIFTVQVYRWWYKPVLKEPMLWILFAGYLFTGLGLIAVGA
                     SYFKPAFLNLGVHLIGVGGIGVLTLGMMARTALGHTGNSIYPPPKAVPVAFWLMMAAT
                     AVRMVAVFSSGTAYTHSIRTSSVLFALALLVYAWKYIPWLIRPRSDGRPG"
     gene            complement(11897..12769)
                     /locus_tag="ACFJAG_001504"
     CDS             complement(11897..12769)
                     /locus_tag="ACFJAG_001504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase"
                     /protein_id="HFC3980762.1"
                     /translation="MPILNHIALIGVGLIGGSFVLDLKRQGLVRTVTGIDTDRDNLER
                     ALERGVINRASVVIDADSIGGADLVLIATPVATVPAVLTALRPVLPEHTWISDVGSTK
                     SSVIEAFRRCLPDRLHRCIAAHPIAGSDRNGAQAAQFGLFRHRKLIITPHGGEDSDGI
                     ALVENLWRAVGADIFTMDAQHHDAVFAAVSHMPHLTAFAYVHQILDHPDGQEYLKFAA
                     TGFRDFTRIASGHPAVWADICLANKDSLLQLVQGLGKQLDVLADILTADDREALYRYF
                     EEAKTTRDRWLDGN"
     gene            12854..13666
                     /locus_tag="ACFJAG_001505"
     CDS             12854..13666
                     /locus_tag="ACFJAG_001505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HFC3980763.1"
                     /translation="MDKIRVAAVQMVSGVSPETNVAAMKRLVARAAEQGADWVLLPEY
                     WVLMGANDTGKLALAEPLGGGRFQTALSETAKECGVVLFGGTVPLQSPEAGKVMNTLL
                     VYGCDGVRTGLYHKMHLFGFSGLGERYAEADTIRAGREVPHLSAEGMPVAAGICYDVR
                     FPEFFRRQLPFDVLMLPAAFTHTTGKAHWELLLRARAVENQCYVVAAAQGGLHENGRR
                     TFGHSMIVDPWGDVLDVLPEGEGIVTADIDANRLNSVRNRLPALKHRVLDAV"
BASE COUNT         3115 a         3808 c         3904 g         3082 t
ORIGIN      
        1 aattcagatg tttttccctt ttctgaataa tccccttgtt ttcttcttgt ctgcggtttt
       61 gccgcataat tccgaacggt ctgctgtttt tctttgattc gttttaaata tcaataagat
      121 aatttttccc atatattttt aatgattggg atgcccgacg cgtcggatgg ctgtgttttg
      181 ccgtccgaat gtgatggaag cctgtccata ctgaaaaaaa aagtctataa aggagaaata
      241 tgatgagtca acactctgcc ggagcacgtt tccgccaagc tgtgaaagaa tcgaatccgc
      301 ttgccgtcgc cggttgcgtc aatgcttact ttgcatgatt ggccacccaa agcggtttca
      361 aaaccatcta tctgtccggc ggcggcgtgg cagcctgttc ttgcggtatc cctgatttgg
      421 gcattaccac aatggaagat gtgctgatcg acgcacgacg cattacggac aacgtggata
      481 cgcctctgct ggtggacatc gatgtgggtt ggggcggtgc attcaatatt gcccgtacca
      541 ttcgcaactt tgaacgcgcc ggtgttgcag cggttcacat cgaagatcag gtagcgcaaa
      601 aacgctgcgg ccaccgtccg aacaaagcca tcgtttccaa agatgaaatg gtcgaccgca
      661 tcaaagctgc cgtagatgcg cgcgttgatg agaacttcgt gattatggcg cgtaccgatg
      721 cgctggcggt agaaggtttg gatgccgcta tcgaacgcgc tcaggcttgt gtcgaagccg
      781 gtgcggacat gattttccct gaagccatga ccgatttgaa aatgtaccgt caatttgcag
      841 atgcagtgaa agtaccagta ttggccaaca ttaccgagtt tggtgctaca ccgctttata
      901 cgcaaagcga gttggctgaa aacggcgtgt cactggtgct gtatccgttg tcatcattcc
      961 gcgcagcaag caaagccgct ttgaatgttt acgaagcgat tatgcgcgat ggcactcagg
     1021 cggcggtggt ggacagtatg caaacccgtg ccgagctgta cgagcatctg aactatcatg
     1081 ccttcgatca aaaactggat aaattgtttc aaaaatgatt taccgctttc agacggcctt
     1141 tcaacaaatc cgcatcgacc gtctgaaaaa taaaacccat aaaaatacaa aggagaaata
     1201 ccatgactga aactactcaa accccgacct tcaaacctaa aaaatccgtt gcgctttcag
     1261 gtgttgcggc cggtaatacc gctttgtgta ccgttggccg taccggtaac gatttgagcc
     1321 atcgcggtta cgacattcta aatttggcac aaaaatgcga gtttgaagaa gtcgcacact
     1381 tgctgattca cggccatctg cccaacaaat tcgagctggc cgcttataaa accaagctca
     1441 aatccatgcg cggcctgcct atccgtgtga ttaaagtttt ggaaagcctg cctgcacata
     1501 cccatccgat ggacgtgatg cgtaccggcg tgtccatgct cggctgcgtt catcccgaac
     1561 gcgaaagcca tcccgacagc gaagcgcgcg acatcgccga caaactgatc gccagcttgg
     1621 gcagcatcct gctgtactgg tatcaatatt cgcacaacgg caaacgtatt gaagttgaaa
     1681 gcgacgaaga gaccatcggc ggccacttcc tgcacctgtt gcacggcaaa cgcctgaccg
     1741 aatcgcaggt aaaagccatg cacgtttcgc tgattctgta tgccgaacac gagttcaacg
     1801 cctccacctt tactgcccgc gtgattgccg gtacgggttc ggatatgtat tcctgcatca
     1861 ccggcgccat cggcgcgctt aaaggtccga aacacggcgg tgcgaacgaa gtcgcctacg
     1921 acatccaaaa acgctaccgc aacgccgacg aagccgacat ccgcgaacgc atcggccgca
     1981 aagaaatcgt gatcggtttc ggccatccgg tttacaccat ttccgacccg cgcaacgtcg
     2041 tgattaaaga agtggcgcgc ggtttgagcc gggaagcggg cgacatgcgc ctcttcgaca
     2101 tcgccgaatg cttggagagc gtgatgtggg aagagaaaaa aatgttcccg aatctggact
     2161 ggttctctgc cgtttcctac caaaaattgg gcgtaccgac cgctatgttc acaccgctgt
     2221 tcgtgatttc ccgtacaacc ggttggagcg cacacgtcct cgagcaacgc aaagacggca
     2281 aaatcatccg tccgagcgca aactacaccg gccctgaaga tttggcgttt gtggagattg
     2341 aagaacgata attgaagaat gcaatagcag tttgttcttt atttcggtat gcaaagctga
     2401 ggatttcaga cgaccttgcc ttattggaaa ggttgtctga aataagttta atctaatagg
     2461 agaagataat cctgtattgg cgcaagtaac aggataagaa acatggaaga tttatacata
     2521 atactcgctt tgggtttggt tgcgatgatc gccggattta tcgatgcgat tgcgggcggg
     2581 ggtggtttga ttacgctgcc tgcactcttg ttggcaggta ttcctcccgt gtcggcaatt
     2641 gccaccaaca agctgcaagc agccgctgct acgttttcgg ctacggtttc ttttgcacgc
     2701 aaaggtttga ttgattggaa gaaaagtctc ccgattgccg cagcatcgtt tgcaggcggc
     2761 gtggtcggtg cattatcggt cagcttggtt tccaaagata ttttgctggc ggtcgtgccg
     2821 gttttgttga tatttgtcgc gctgtatttt gtgttttcgc ccaagctcga cggcagtaag
     2881 gaaggcaaag ccagaatgtc tttttttcta ttcgggctga cggttgcacc gcttttgggt
     2941 ttttacgacg gtgtgttcgg accgggtgtc ggctcgtttt ttctgattgc ctttattgtt
     3001 ttgctcggct gcaagctgtt gaacgcgatg tcttacacca aattggcgaa cgttgcttgc
     3061 aatcttggtt cgctatcggt attcctgctg cacggttcga ttattttccc gattgtggca
     3121 acgatggcgg tcggtgcgtt tgtcggtgcg aatttaggtg cgagatttgc cgtccgcttc
     3181 ggttcgaagc tgattaagcc gctgctgatt gtcatcagca tttcgatggc tgtgaaattg
     3241 ttgatagacg agagaaatcc gctgtatcag atgattgttt cgatgtttta aaccctttca
     3301 gacgactcct tcaaaacatc ggctgaaacc caaaccacaa gaaaaataga tccacaggag
     3361 aaccgacatg actgccaacc aaagttaccg caaaccgctg cccggtacgg atttggaata
     3421 ctacgacgcg cgtgcggcgt gtgaggacat caaacccggc tcttacgaca agctgccgta
     3481 cacgagccgc attttgtctg agaacttggt caaccgcgcg gacaaagtcg atttgccgat
     3541 gctgcaaagc tggctgggcc agttgataga agggaagcag gaaatcgatt ttccgtggta
     3601 tcccgcgcgg gtggtgtgcc acgatattct ggggcagacc gcgctggtgg atttggcagg
     3661 cttgcgcgat gcgattgccg aaaaaggcgg cgatcctgcc aaagtgaatc cggtggtgca
     3721 gacgcagctt atcgtcgacc actctttggc ggtggagtgc ggcggttacg atcctgatgc
     3781 cttccgcaaa aaccgcgaaa tcgaagacag acgtaacgaa gaccgtttcc acttcatcaa
     3841 ctggacaaaa accgcatttg aaaatgtgga cgtgattccg gcgggcaacg gcatcatgca
     3901 ccaaatcaat ctggaaaaaa tgtcgcccgt cgtccaagtc aaaaacggcg tggctttccc
     3961 cgatacctgc gtcggcacgg actcgcatac gccgcacgtt gatgcgctgg gcgtgatttc
     4021 cgtggcgtgg gcggtttgga agcggaaacc gtgatgctgg gacgcgcgtc catgatgcgc
     4081 ctgcccgata ttgtcggcgt ggagctgacg ggcaaacggc aggcgggcat tactgccaca
     4141 gacatcgtgt tggcactgac cgaattcttg cgtaaagagc gcgtggtcgg ggcgtttgtc
     4201 gaatttttcg gcgagggcgc gagaagcctg tctatcggcg accgcgcgac catttccaac
     4261 atgacgccgg agttcggcgc gactgccgcc atgttcgcca tcgacgcgca aactattgat
     4321 tatttgaaac tgaccggacg tgacgacgcg caggtgaaat tggtggaaac ctacgccaaa
     4381 accgcaggct tatgggcagg tggcttgaaa accgccgttt atccgcgcgt tttgaaattt
     4441 gatttgagca gcgtaacgcg caatatggca ggcccgagca acccgcacgc gcgttttgcc
     4501 accgccgatt tggcggcgaa agggctggcg aagccttacg aagagccttc agacggccaa
     4561 atgcctgacg gtgcagtgat tattgccgcg attacttcgt gtaccaatac ttccaacccg
     4621 cgcaacgttg tcgccgccgc actgttggca cgcaatgcca accgcctcgg cttgaaacgc
     4681 aaaccttggg tgaaatcttc gtttgccccg ggttcaaaag tagccggaat ctatttgaaa
     4741 gaagcaggct tgttgcccga aatggaaaaa ctcggcttcg gtatcgtcgc cttcgcatgt
     4801 accacctgta acggcatgag cggcgcgctc gacccgaaaa tccaacaaga aatcatcgac
     4861 cgcgatttgt acgccaccgt cgtattgtca ggcaaccgca acttcgacgg ccgtatccat
     4921 ccgtatgcga aacaggcttt cctcgcttcg cctcctttgg tcgttgccta cgcattggca
     4981 ggtagcatcc gtttcgatat tgaaaacgac gtactcggcg ttgcagacgg ccgcgaaatc
     5041 cgcctgaaag atatctggcc gacagacgaa gaaatcgatg ccatcgttgc cgaatatgtg
     5101 aaaccgcaac aattccgcga catttatatc ccgatgtccg acaccggcac agcgcaaaaa
     5161 gcaccaagcc cgctgtacga ctggcgaccg atgtccacct acatccgccg tccgccctat
     5221 tgggaaggcg cactggcagg ggaacgtaca ttaagaggta tgcgtccgcc ggcgattttg
     5281 cccgacaaca tcaccaccga ccacatctcg ccatccaatg cgattttggc cggcagtgcc
     5341 gcaggtgaat atttggcgaa aatgggtttg cctgaagaag acttcaactc ttacgcaacc
     5401 caccgcggcg accacttgac cgcccaacgc gcaaccttcg ccaatccgaa actgtttaac
     5461 gaaatggtga gaaacgaaga cggcagcgta cgccaaggtt cgttggcacg cgttgaacca
     5521 gaaggccaaa ccatgcgcat gtgggaagcc atcgaaacct atatgaaccg caaacagccg
     5581 cttatcatca ttgccggtgc ggactatggt caaggctcaa gccgcgactg ggcggcgaag
     5641 ggcgtgcggc tggcgggtgt ggaagccatc gccgccgaag gtttcgagcg catccaccgc
     5701 accaacctca tcggcatggg cgtcttgccg ctgcaattca aacccggcac caaccgccat
     5761 accctgcaac tggacggtac ggaaacctac gacgttgtcg gcgaacgcac accgcgctgc
     5821 ggcctgaccc tcgtgattca ccgtaaaaac ggcgaaaccg tcgaagttcc ggttacctgc
     5881 cgccccgata ccgcagaaga agcattggta tatgaagccg gcggcgtgtt gcaacgtttc
     5941 gcacaagatt ttttagaagg aaatgcagcg taaggtaatc gggtatcgtc aaaatgtccg
     6001 ggctgcgctc aaaaaggttt tcagacggcc tcgaatgttt gagagaccgt ctgaaaaacc
     6061 atattaaaaa tacaaaggag aactcgaaat gccgcagatt aaaattccag ccgtttacta
     6121 ccgaggcggt acatctaaag gcattttctt caaacgcacc gatttgccgg ccgctgcgca
     6181 acaagaaggc gaggcgcgcg acaaaatcct cttgcgcgta ctcggcagcc ccgaccctta
     6241 cggcaaacag attgacggtt tgggcaacgc cagttcgtcc accagcaaag ctgtgatttc
     6301 ggacaaatcc gaacgcgccg atcacgatgt cgattacttg ttcggacaag tttccatcga
     6361 caaaccattt gtcgattgga gcggcaactg cggcaacctt accgccgccg tgggcgcatt
     6421 cgccatcgaa cagggcttgg tcgataaatc caaaatccct tcagacggca tctgcacggt
     6481 caaaatctgg cagaaaaaca tcggcaaaac cattattgcc catgtgccga tgcaaaacgg
     6541 agcagtgttg gaaacaggcg atttcgagct tgacggcgta attttccggc agccgaagta
     6601 caaatcgaat ttttagatcc agccgacggc gaaggcagta tgttcccaac cggcaatttg
     6661 gtcgacgaaa ttgatgtgcc gaatataggt cgtctgaaag ccacgctcat caacgcgggc
     6721 attccgaccg ttttcctgaa cgccgccgac ttgggctaca cgggcaaaga gttgcaggac
     6781 gacatcaaca acgatgccgc cgcgctggaa aaatttgaaa ccatccgcgc atatggcgcg
     6841 ctgaaaatgg gtttgatcag cgacgtatcc gaagccgccg cccgcgcgca cacgccgaaa
     6901 cccgccttcg tcgcgcccgc cgccgattac accgcctcca gcggcaaaac cgtaaacgcc
     6961 gccgacatcg atttgccggt acgcgccctg agcatgggca aactgcacca cgctatgatg
     7021 ggcatcgcct cggtcgccat cgccgccgcc gtgctcggta cgctggtcaa ccttgccgca
     7081 ggcggcggaa cgcgtaaaga agtgcgcttc gggcatccgt caggtacgct gcgtgtcggt
     7141 gctgccgccg aatgtcagga cggacaatgg acggccgcca aagcggtcat gagccgcagc
     7201 gcacgcgtga ttatggaagg ttgggtgcgc gttcccgatg attgtttttg aaatcatgta
     7261 ggacgcacat tgctgtccgc tgtttcagac ggcatttgat taaggattac cataaagccg
     7321 aataacctta ccgccgtcat tcccacgcag gcgggaatcc gcagccgata ttctgtttcc
     7381 tgatttttat cagagcctgc gtgtgagcaa atatggattc ccgcctgcgt gggaatgacg
     7441 ctaggaaata cggcatacgc tttgcccaaa gaggccgtct gaaacacact ccgcccaacg
     7501 cccatccttt ttcagacggc cccgcaccaa aaaaacaacc acaaactaca aggagaaaca
     7561 tcatgtccga ccaactcatt cttgtcctga actgcgtcag ttcatcgctc aaaggcgccg
     7621 ttatcgaccg caaaagcggc agcgtcgtcc taagctgcct cggggaacgc ctgactacgc
     7681 ccgaagccgt cattaccttc aacaaagacg gcaacaaacg ccaagttccc ctgagcggcc
     7741 gcaactgcca cgccggcgcg gtgggtatgc tgttgaacga actggaaaaa cacggactgc
     7801 acgaccgcat caaagccatc ggccgccgca tcgcccacgg cggcgaaaaa tatcacgagt
     7861 ccgtcctcat cgaccaagac gtccttgacg aactgaaagc ctgcatcccg ttcgccccgc
     7921 tgcacaaccc cgccaacatc agcggcatcc tcgccgcgca ggaacacttt cccggcctgc
     7981 ccaacgtcgg cgtgatggac acctcgttcc accaaaccat gccggagcgg gcctacactt
     8041 atgccgtgcc gcgcgaattg cgcaaaaaat acgccttccg ccgctacggt ttccacggta
     8101 ccggtatgcg ttacgtcgcc cctgaagccg cacgcatctt gggcaaacct ctggaagaca
     8161 tccgcatgat tattgcccac ttaggcaacg gtgcatctat taccgccgtc aaaaacggca
     8221 aatccgtcga taccggtatg ggtttcacgc cgatcgaagg tttggtaatg ggtacacgtt
     8281 gcggcgacac cgatccgggc gtatacagct atccgacttt ccacgcaggg atggatgttg
     8341 cccaagttga tgaaatgctg aacgaaaaat caggtttccc cggtatttcc gaacttccca
     8401 acgactgccg caccctcgaa atcgccgccg acgaaggccg cgaaggcgcg cgcctcgccc
     8461 tcgaagtcat gacctaccgc ctcgccaaat acatcgcttc gatggctgtg gcctgcggca
     8521 gtgttgacgc actcgtgttc accggcggta tcggcgaaaa ctcgcgtaat atccgtgcca
     8581 aaaccgtttc ctatcttgat ttcttgggtc tgcacatcga caccaaagcc aatatggaaa
     8641 aacgctacgg caattcgggc attatcagcc cgaccgattc ttctccggct gttttggtcg
     8701 tcccgaccaa tgaagaactg atgattgcct gcgacactgc cgaacttgcc ggcatcttgt
     8761 agccaaaaaa gggggcgagt ccgcaaaaat gccgtctgaa aggttttcag acggcatttt
     8821 gtttggcgtt tgggcgtaca atacggaaaa catgacgata aggaaacaaa ctatggcaca
     8881 atttttcgcc gttcatcccg acaatcccca agaacgcctc atcaagcagg cagtcgaaat
     8941 catcaatcaa ggcggcgtgg tggtttatcc gaccgattcc tgttacgcct tgggttgcaa
     9001 actcggcgat aaggcggcga tggaacgcat actctccatc cgaaaaatcg atttgaaaca
     9061 ccacctgacc ctgatgtgcg ccgatttgag cgagttgggc acatacgcca aaatcgacaa
     9121 cgtacagttt cgtcagctta aagccgccac gcccgggcct tataccttta tcttgcaggc
     9181 gacgaaggat gcgccggcgc gcgccctgca cccgaaacgc aaaaccatcg ggctgcgtat
     9241 tcccgataat gccgttgcac aagccctgct ggaggagttg ggcgggccgc ttttaagctg
     9301 caccctgatg ctgcccgaag acggcgaacc attgaccgac ccttatgaaa tccgcgagcg
     9361 tttggaacac gccgtcgatt tggtaattga cggcggctgg tgcggaaccg atccgactac
     9421 cgtcatcgac atgaccgacg gcacggaact ggtgcgccgg ggtttcggcg atacggcggt
     9481 gttcggtttg tagggaaacc gatgccgtct gaagcatcag ccgttcagac ggcatcgcgc
     9541 gccttgccgg cggcagcccg aaatgccggc gcgtatcgcg cccggtcgga atatccgttt
     9601 gaaacggcaa acaaaatgcc gtccgaacgc gggtttgggc ggcattttga tgcgttatcg
     9661 caccgcaatc gggattttcg attcataaag caggtcgtag gtcggcttgt tgagcaggtc
     9721 ttgcagcgtg aaaccgtcca gatacgtgaa aaacgacttc attgcaccgc cgagtatgcc
     9781 cgtcagccgg caggacggcg taatcaggca ttcgttgttc gggcccatac actcgaccag
     9841 ctgcatcggt tcgaggtggc ggacgaccgc gccgatattg atgcgttcgg gcggcgcggc
     9901 cagcctcagc ccgccgcctt tcccgcgtac gctgtgcaag aacccgcctt tgaccagcgc
     9961 ggtaaccact ttcatcaaat ggcttttgga aatgccgtag gtcgaggcga tggtggcgat
    10021 attgaccagc gcgtcgtcgt tgacggcggt gtagatgagg acgcgcagcc cgtagtcggt
    10081 atgttgggtc agatacatga ttttctcggt atggatcgtt attcttatcg gtacggttta
    10141 agtttcacgg aaaatacctt aatggttgaa accctgtccg tcggggcggt agaatgtagc
    10201 ctgtctgcgg cggtatgccg tctgaaacat ccgcgctacc gtttgataat ttgttattgt
    10261 aacctaaatt tatgaaaccg ttgaaacgac attccgccct tgtcgggctt tcgcgcgaac
    10321 accaccactc gctttccctg tgcgtgcgta tgttgcggac gcccggggca gaccatcgtg
    10381 ccgaactcga gctgcatttt gccgaactgg aaacccattt tcgcgaagaa gaagccaagt
    10441 ttgccccaat ttggcagaat gtcgcgcctg agttgaaaac ccgttttgaa ggcgatcacg
    10501 ccaaactgcg gcagatgatg gcaagccccg aatgcggtaa cgcggcgtgg aataccgctt
    10561 ttgccacaac cctgcgcgac cacgcgcgct ttgaagaacg cgagctgttt cccgccgtcg
    10621 aaccgttttt gccggcatga ttccgttttg cggcaaatat attaatgata aacaaggaac
    10681 acacatgaaa tttaccaaac atcccgtctg ggcaatggcg ttccgcccgt tttattcact
    10741 ggcggcactg tacggcgcat tgtccgtatt gctgtggggt ttcggctaca cgggaacgca
    10801 cgagctgtcc ggtttctatt ggcacgcgca tgagatgatt tggggttatg ccggtctcgt
    10861 cgtcatcgcc ttcctgctga ccgccgtcgc cacttggacg ggacagccgc ccacgagggg
    10921 cggcgttctg gtcggcttga ccgccttttg gctggctgcg cggattgccg cctttatccc
    10981 gggttggggt gcggcggcaa gcggcatact cggtacgctg tttttctggt acggcgcggt
    11041 gtgcatggct ttgcccgtta tccgttcgca aaaccggcgc aactatgtcg ccgtattcgc
    11101 aatatttgtg ctgggcggta cgcatgcggc gttccacgtc cagctgcaca acggcaacct
    11161 aggcggactc ttgagcggat tgcagtcggg cctggttatg gtgtcgggct ttatcggcct
    11221 gattgggatg aggattattt cgttttttac gtccaaacgg ttgaacgtgc cgcagattcc
    11281 cagtccgaaa tgggtggcgc aggcttcgct gtggctaccc atgctgaccg ccatactgat
    11341 ggcgcacggc gtgatgcctt ggctgtcggc ggctttcgcg tttgcggcgg gcgtgatttt
    11401 taccgtacag gtgtaccgct ggtggtataa acccgtattg aaagaaccga tgctgtggat
    11461 tctgtttgcc ggctatctgt ttaccggatt ggggctgatt gcggtcggcg cgtcttattt
    11521 caaacctgcc ttcctcaatc tgggcgtaca tctgatcggg gtcggcggta tcggcgtgct
    11581 gactttgggc atgatggcgc gtaccgcgct cggtcatacg ggcaattcga tttatccgcc
    11641 gcccaaagcc gttcccgttg cgttttggct gatgatggcg gcaaccgccg tccgtatggt
    11701 tgccgtattt tcttccggca ctgcctacac gcacagcatc cgcacgtctt cggttttgtt
    11761 tgcactcgcg ctgctggtgt atgcgtggaa atacattccg tggctgatcc gtccgcgttc
    11821 ggacggcagg cccggttgag taaaaccgcc gcagatttcg ggtctgcggc ggtttgcttt
    11881 tcagacggca tggcggtcag ttgccgtcca gccagcggtc gcgcgtggtt ttggcttctt
    11941 caaaatagcg gtacagggct tcgcggtcgt cggcggtcag gatgtctgcc aaaacgtcca
    12001 actgtttgcc caagccttga accagttgca gcaggctgtc tttgttggca aggcagatgt
    12061 ccgcccacac ggcgggatgg ccggaggcga tgcgggtgaa gtcccgaaag cccgtggcgg
    12121 cgaatttcag atattcctgc ccgtcggggt ggtcgagaat ctggtggaca taggcgaagg
    12181 cggtcaggtg gggcatatgg gagacggcgg cgaaaaccgc gtcgtggtgt tgcgcgtcca
    12241 tcgtgaaaat gtccgcaccg accgcgcgcc acaggttttc taccaatgcg atgccgtctg
    12301 aatcttcgcc gccgtggggc gtgatgatga gttttctgtg gcggaacagc ccgaactgcg
    12361 cggcttgcgc accgtttctg tccgaaccgg caatcgggtg tgcggcgatg cagcggtgca
    12421 ggcggtcggg caggcagcgg cggaaggctt cgatgaccga agatttggtg ctgccgacat
    12481 cggaaatcca agtgtgttcc ggcaaaacgg ggcgcagcgc ggttaaaacg gcgggaacgg
    12541 tggcgacggg cgtggcaatc agtaccaagt ccgcaccgcc gatgctgtcc gcgtcgatga
    12601 cgacggaagc ccggttaatc acgccgcgtt ccaatgcacg ttcgaggttg tcgcggtcgg
    12661 tgtcgatacc ggtaacggtg cggacgagtc cctgcctttt gaggtcgaga acgaacgaac
    12721 cgccgatcag ccctacaccg atgagggcaa tatggttcaa aatgggcatt tgtgtaaacg
    12781 gttttcgcaa agtgccgcca tggtagccta tcggcggaat atgccgcaag gtcggcagga
    12841 aaaaggagaa gaaatggaca aaatcagagt tgccgccgtg cagatggtgt cgggcgtgtc
    12901 gccggaaacc aacgtcgccg ccatgaaacg cctggtcgca cgggcggcgg agcagggtgc
    12961 ggattgggtg ctgctgcccg aatattgggt gctgatgggc gcaaacgata ccggcaaact
    13021 cgcacttgcc gagcctttgg gcggcggacg ctttcagacg gcattgagcg aaacggcgaa
    13081 agaatgcggc gtggtgctgt tcggcggaac cgtgccgctg caaagccccg aagcgggcaa
    13141 ggtcatgaat actttattgg tgtacgggtg cgacggcgta aggacggggc tgtaccacaa
    13201 aatgcacctc ttcggttttt ccggtttggg cgaacgctat gccgaagccg ataccatccg
    13261 cgcagggcgg gaagtgccgc acttgtcggc agaaggcatg ccggtggcgg caggtatttg
    13321 ttacgatgtc cgctttcccg aatttttccg ccgccaactg ccgtttgacg tattgatgct
    13381 gccggcggca tttacccata cgacgggcaa ggcgcactgg gagctgctgc tgcgcgcgcg
    13441 tgccgtcgaa aaccaatgtt acgtcgtggc ggcggcacag ggcggtttgc acgaaaacgg
    13501 acggcgcacg ttcggacaca gtatgattgt cgatccgtgg ggcgacgtgt tggacgtatt
    13561 acccgaaggc gaaggcatcg ttacggcaga catcgatgcc aaccgcctga acagcgtccg
    13621 caaccgcctg cccgccttga aacaccgggt tttggatgcc gtctgaaagt tcagacggca
    13681 tcggtgtcgg ggaatcagcg ggccgtagca accgaaccgt cattcccacg gaagtgggaa
    13741 tctagaatct cggggtttca gtcatttccg atagattccc gccgcgtcgg gggtccggat
    13801 tcccgcctgc gcgggaatga cgggtttcga gattacggtg ttgtcgggaa tgacggttcg
    13861 ggtattttac tgcgcccgcc ccgcgcccgt aaacggcggg cgcgtcaaa
//
LOCUS       DAXFZM010000062        13720 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.062, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000062 DAXFZM010000000
VERSION     DAXFZM010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13720)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13720)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13720
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.062"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(207..983)
                     /gene="trbJ"
                     /locus_tag="ACFJAG_001506"
     CDS             complement(207..983)
                     /gene="trbJ"
                     /locus_tag="ACFJAG_001506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-type conjugative transfer protein TrbJ"
                     /protein_id="HFC3980764.1"
                     /translation="MQKRLLSKTKTVALSLAVSVSLGLSAPAYAGIPVTDGGNIAQSS
                     VSAIQNVAQTLKQIEEYRIQLKQYETQLRNSLAPAAYVWDQANKTMANMKAAVARLRA
                     YKQQLGNMEEYLSKFQAVDFYKSSPCFTAKGCSAADRAKLEQNYAQLSRMQKLSNDGL
                     LRSINNEIDSISRDANTLTQLQRNAQSATGQLEALQYANQFHSAQAHQLLQLRNMINT
                     EMQANAAYRQSQLDREARYEAARKQVRTSDILKHPYRRGQ"
     gene            complement(996..2435)
                     /locus_tag="ACFJAG_001507"
     CDS             complement(996..2435)
                     /locus_tag="ACFJAG_001507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrbI/VirB10 family protein"
                     /protein_id="HFC3980765.1"
                     /translation="MSQSTEDLLNASRSPSIAPDTSGRRPGVRRLNNIPIYIVGGVVL
                     GFALLIALVAATKGQQSAGQATQGDGKDATRMADSLLNELPQEGGLITAKASEPAMPA
                     LPDGMASAPDLPASAPTSLPMVPDMANLPATPPEVDQEAEQIRQAKAQMFQAALAAPT
                     KVDVVASTSRGSSGLYTAALSSSGSGTPNRSEMLAQIAEVQRMSENAGSNPAEVERVY
                     NQQLTNAQQMAAAGGQDGVQGAGGMPGLNTPPTPGNIPRQTAQNGGNNWRLESQVERP
                     NAYMIRSGAVIPATLISGINSDLPGMVQAQISQNVYDTATGRHLLLPQGSRLVGTYSS
                     GINLGQRRLFIAWNRIIFPDGKALDIGDMPGASGAGYAGFSDRINNHYGRLWGNALML
                     SLVGASITYGVDKNSNNNNNGNNNGNNSTVRGALSESLGQTFGQAVSQSIQKNMNVSP
                     TLEIRPGYRFNVILTKDIDFSKPYRSFDY"
     gene            complement(2439..2849)
                     /locus_tag="ACFJAG_001508"
     CDS             complement(2439..2849)
                     /locus_tag="ACFJAG_001508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TrbH"
                     /protein_id="HFC3980766.1"
                     /translation="MKSNVLFVALALAVGGCATGQYGSFVRSDAVSASVTQDVVEKLQ
                     EEFPAANTVFFLNRSKSDTFGTQLDQALREKGFATTAQQGENEKSLNYVLDQVDSDIY
                     RVMIYIDGTPYSRAYRQTENGAVVPTGSWTKRGD"
     gene            complement(2846..3712)
                     /gene="trbG"
                     /locus_tag="ACFJAG_001509"
     CDS             complement(2846..3712)
                     /gene="trbG"
                     /locus_tag="ACFJAG_001509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009291 - unidirectional conjugation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="P-type conjugative transfer protein TrbG"
                     /protein_id="HFC3980767.1"
                     /translation="MKRQILSLALITALSTSAFADSYADKYFEGSHNPKLNRHEQKGL
                     GIAKNYSSDGRMAVPPVPGDNGRITFAFGSDPSVVCAVMQVCDIALQPGEMINDLHAG
                     DTARWNITPAISGSNGNERMHILVKPLDVGLQTTLFIATDRRTYHIRLKSHRTRYMPA
                     VGFSYPEDTAARWRAIRANQARQAEAQVLPTGENIQNLDFNYTISGHNPSWKPLRVYN
                     DGTRTIIQMPPTLSQGEAPALLVVRNGENTLVNYRLHEDRYIVDSLFDEAIMITGVGR
                     HQTKVVIRRSRS"
     gene            complement(3725..4432)
                     /locus_tag="ACFJAG_001510"
     CDS             complement(3725..4432)
                     /locus_tag="ACFJAG_001510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VirB8/TrbF family protein"
                     /protein_id="HFC3980768.1"
                     /translation="MGLKDIFRGREKADREMTENPYLNARKQWNFIMGDMVSSRLLWQ
                     WAGMTGLLIGLGGVGGMIYLGSQSKFIPYIVEVNKLGETVAVARADQPQATDERIVRA
                     MLGSFIGNARTVTTDIALQRKYVLNTYAMLNPKDAAAAKMNEWLNGTPESSPFKRAEK
                     ELVSVEIKSVLRQSDNSWQVYWVETTRAHDGKLLKPPQNMRALLNIYYVPPTTEQQII
                     VNPIGMFIRDFSWSNEL"
     gene            complement(4432..6996)
                     /locus_tag="ACFJAG_001511"
     CDS             complement(4432..6996)
                     /locus_tag="ACFJAG_001511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VirB4 family type IV secretion/conjugal transfer
                     ATPase"
                     /protein_id="HFC3980769.1"
                     /translation="MIIGIISAISVLGLVLCTGLFLKIRAVTNATKLKQHRSKEEGLA
                     DLLNYAAVIDDGVILGKNGSLMAAWIYRGKDMGSSTVAEREDVSLRINQAFVGLGSGW
                     MVHVDAARRPAPNYTEAGRNYFDSYVTEAIDNERRQAFEAIGTLYEGFFVIVATYFPP
                     LLAEKKVAELMFDDDNAKEGKRAQQDRTLSHFKQACANLESNLSISLELHRLCAHKVV
                     LEDGMEITQDDFLRWLHFCITGKNHPINLPAAPMYIDSLIGGQELYTGVVPMIGDKFI
                     QVVALDGFPMESYPGILTRLGEMPIEYRWSNRFIFMDQHQAVADLEKYRKKWKQKVRG
                     FFDQVFNTHSGSIDQDAQAMVDDAEAALAETKSGLVAQGYYTSVVILMHEDRAFLESM
                     ARQVEKEINTLGFNARVETVNTMEAWLGSLPGHGIENVRRPLLNTLNFADMIPTSSIW
                     TGLEENPCQFYPPNSPPLMQVVTSGSSPFHLGLHVGDVGHTLVFGPTGAGKSTLLATL
                     AAQADRYRNMRVFSFDKGRSLETLTRAVGGSHYNIGDEDNTASGLSFAPMQLIQNTSD
                     RAWALSWVEAVMELNGLKVTPQQRNEIETAIKNNAAEQSYSLSDLSNTLQDVEMREVL
                     KAYTIDGSMGYLLDAEQDSLSFSRFTCFEIEELMNLPEKYALPIMLYLFRRIEKALTG
                     DPAVLFLDEAWIMLGHPVFREKIREWLKVLRKKNCLVLLATQSLSDAANSGILDVLNE
                     SCPTKIYLPNAHAREEDASELYRRMGLNARQIEILATAIPKRQYYYTSPYGRRLFELA
                     LDPLTLAFVAVSDPDTLNAMRQTADQYGEDWPIRWLQNRGINIHNYVDVDKYRRKH"
     gene            complement(6993..7310)
                     /gene="trbD"
                     /locus_tag="ACFJAG_001512"
     CDS             complement(6993..7310)
                     /gene="trbD"
                     /locus_tag="ACFJAG_001512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010676131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TrbD"
                     /protein_id="HFC3980770.1"
                     /translation="MRAIRTIPIRRVANRPNLFWGGDREMVQVSLLITFVLVVAAQNT
                     YAFVIGLVFWFFALYALRKLAKYDPLLRFVGLRSITKYKRFYPPHSTPFRNNTSTQGN
                     RYK"
     gene            complement(7315..7698)
                     /gene="trbC"
                     /locus_tag="ACFJAG_001513"
     CDS             complement(7315..7698)
                     /gene="trbC"
                     /locus_tag="ACFJAG_001513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer system pilin TrbC"
                     /protein_id="HFC3980771.1"
                     /translation="MTLSQSQQKWLFFIGLAVFLLLMSSPALASQGQGGGLPYESWLN
                     NLRQSVTGPVAFALSIIGIVVAGGVLIFGGELNAFFRTLIFLVLVMALLVGAQNMMSS
                     FFGGAEVTAAVQAAQHYLLPLASKG"
     gene            complement(7800..8798)
                     /gene="trbB"
                     /locus_tag="ACFJAG_001514"
     CDS             complement(7800..8798)
                     /gene="trbB"
                     /locus_tag="ACFJAG_001514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="P-type conjugative transfer ATPase TrbB"
                     /protein_id="HFC3980772.1"
                     /translation="MMETTETADSRKERALNKLKRDLGNEFLEKFMNPNLVEVMFNPK
                     QTGNGVSVYWEEQGKEMVYDERLSDWFKTSRVEAVIKTVAGYHGKVITEDLPILESQF
                     PIDGSRFTAILPPVTASPSFTIRKKPARVFTLDEYVSAGIMTESQRQTIRNAVSEHGN
                     ILVIGGTGSGKTTLINAILYDMSEQNPNERLYISEDTGEIQCHSQNKVQVYTTGSIDL
                     TKLVKTALRYRPDRIIVGEVRGAEALDLLDIWNTGHPGGIATLHANNAALGLERLESL
                     ITRNPAHPAAIRPLVAQVIHYIVSIGKDEKTGRKIREIIKIKGLDEKSGNYVFDYL"
     gene            complement(8926..9291)
                     /locus_tag="ACFJAG_001515"
     CDS             complement(8926..9291)
                     /locus_tag="ACFJAG_001515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HFC3980773.1"
                     /translation="MSYSKIFFTNVLRLASEKNLSHQDLAERANLSPSSMSGITRGQG
                     NPTLETMSAIAYALDVPLSYLLEHHDLDPESLSLLDGSQSTLPPNYEKITVILPRYKA
                     FQVKKWNDDALKILAKETK"
     gene            9351..9734
                     /locus_tag="ACFJAG_001516"
     CDS             9351..9734
                     /locus_tag="ACFJAG_001516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HFC3980774.1"
                     /translation="MNKFIISGRTTKDLTLEQTATGVFTTSIPLAENYFYTKDGKKVE
                     ATNYFWIDVYGEQAKNAVRYCGKGSLILIEGRISNNNYEKDGQKIYKDQMIASRIEYS
                     NLKPPAGREESSDPSFIYDPEQDLG"
     gene            9738..10616
                     /gene="trfA"
                     /locus_tag="ACFJAG_001517"
     CDS             9738..10616
                     /gene="trfA"
                     /locus_tag="ACFJAG_001517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid replication initiator TrfA"
                     /protein_id="HFC3980775.1"
                     /translation="MKNVQEVLPYLNLVAERRDEAQREEYLKSKGIPTDDNLIIEDLF
                     GNTIFGSKHRAMPNDFARSCLFTARNHRVPRKTFSREKLFHISEKVEILYTGTELRSV
                     DDELIWMQLVDYCRRFPLGNYVEFDIRQLIKDIGWDTSGAYYKRVRESLSRMKATEIY
                     IKNGNTYGVSGGISLIDNYVGIENIKGEPTRYKVSIDKKLIVLFAGNTFSNIPWSQYK
                     KLSPMARRLTDYVFSHKHPNPIPIPAFLAMCGSDQINSPAKTQNQNAKKICAELTEAQ
                     LVKTAFVLSGKIIVER"
     gene            11233..11580
                     /locus_tag="ACFJAG_001518"
     CDS             11233..11580
                     /locus_tag="ACFJAG_001518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980776.1"
                     /translation="MTDLISTTVLLTPYQAFQAKKWHLQNIEEHNLIQKKDLNIRPEC
                     FHRFPQWAVPTADEVKELWLATGMTQKQVSRYLGLKDTNGRAFRRFISGESSITYAYW
                     VLLSLYVGIEKFW"
     gene            11661..11906
                     /locus_tag="ACFJAG_001519"
     CDS             11661..11906
                     /locus_tag="ACFJAG_001519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980777.1"
                     /translation="MDRIKSKAGKKMFEVVYMVLAIAYLLFPVRWFAWMYSFYVLCQM
                     LYHWNMADSWIYIGKFILTFGIVMGWLTFVIAFRNKI"
     gene            11916..12671
                     /locus_tag="ACFJAG_001520"
     CDS             11916..12671
                     /locus_tag="ACFJAG_001520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HFC3980778.1"
                     /translation="MKILVVANQKGGVGKTAMSLHLAWHMETVGLRVLVIDLDTQGNA
                     SYSLRDKTCLFGSGRLFGNMEDADLHMPGNVSLALSPATNDLANVQNMTLQNAVQSFT
                     QNIDKLKAGGQFDVCIIDTPPSLGNTLAAALAAGDYVLCPIELETYSLQGIKQMAATI
                     GNIRKVNSKLAFLGILPSKVDMRNPRHKRHLEEIKMQYNEIVIPHIIGLRSSIADALS
                     SSLPVWKIKKTAARKAAQEMKAVSNYVLNKMQG"
     gene            12677..13594
                     /locus_tag="ACFJAG_001521"
     CDS             12677..13594
                     /locus_tag="ACFJAG_001521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HFC3980779.1"
                     /translation="MNNSNLGLENIGNLSELLGNAEVSSGTPLRLPLASIKEDPDQPR
                     KEFDEGKIQELANSIQERGVKTPISVRQSSEEGVYVINHGARRYRASLLAGLSEIPAY
                     IDQDYSLIDQAVENIQRDNLTPREIADVIGRLLAEGMKKGQIAEKMGKSPAFVTQHAN
                     LLDLPEPLANAFNSGKVSDLTVINDLNALYKKEPEAVEDLLSNEDEITRSSVRNLKEF
                     LNSDPKNSADADHEKPSKAKVKEKKPEDPDKLKKAIVQVMYQGQLARLVLNKRGLSGD
                     EVWIKFEESGETESVPCKEISGIVAVIEG"
BASE COUNT         3489 a         3181 c         3517 g         3533 t
ORIGIN      
        1 taactactct ttccttttgt atggccgttt taggacatcc tgatctactt tacgtagttc
       61 ttctctgcgt tgttggttct catccttttg ttggcacgca acaagcatga aactacttag
      121 caatacaaaa aataaagttc tcatgaggta atctttcaaa tttagagtgg gtttctaatg
      181 tttattacac attagaaacc ctatttttat tgccctcttc tataagggtg tttcaaaata
      241 tccgacgtcc taacttgttt acgagcagct tcatatctag cctctctatc aagttgactt
      301 tgacgataag cagcatttgc ctgcatctca gtattaatca tattacgcaa ctgaagcagt
      361 tgatgcgctt gagcgctatg gaactggttc gcgtattgta gtgcctccaa ctggccggtg
      421 gctgattggg cgtttcgttg gagttgggtt aaggtgttgg cgtctctgct gatggagtcg
      481 atctcgttat tgatgctcct taataggccg tcattagata atttctgcat gcgcgacaat
      541 tgggcgtagt tttgctcgag tttggcgcgg tcggccgcag agcaaccttt ggcggtaaag
      601 cacggagagc ttttgtagaa gtccacggct tggaatttgc tcaggtactc ttccatgtta
      661 cccagttgct gtttgtaggc tcgcaagcgg gcgacagcgg ccttcatgtt ggccatagtt
      721 ttgttggcct gatcccaaac ataagccgcc ggagccaagg agttccgcaa ctgggtttcg
      781 tactgtttca gttggattcg gtactcctca atctgcttca gggtttgcgc cacattttga
      841 atggcggaga ccgaactttg ggcaatgttg ccgccatccg ttaccgggat gcctgcgtat
      901 gctggtgcgg acagccccaa ggacacggaa acggccaaag acagggctac ggtcttggtt
      961 ttgcttaaaa gacgtttttg cataatgctc tcctgttaat agtcaaagga acgatagggc
     1021 ttagagaaat caatgtcttt agtaagaatg acattgaagc ggtaccccgg gcggatctct
     1081 aacgtcgggg aaacattcat gtttttctga atactttggg acacggcctg tccgaaggtc
     1141 tgacccaagg actccgacaa ggctccgcgc acggtggagt tgttgccgtt gttattgccg
     1201 ttgttattgt tgttactgtt tttgtccacg ccgtaagtga tgctggctcc gactagggag
     1261 agcatcaggg cattgcccca cagacggccg taatggttgt tgatgcggtc gctgaatccg
     1321 gcgtagcctg cgccgctggc tccgggcata tcgccgatgt ccaaggcttt accgtcaggg
     1381 aaaataatgc ggttccacgc gataaacagg cgacgctggc caagattgat gccgctgctg
     1441 taagtgccga ccaagcgcga tccttggggt aaaagcagat gacggccggt ggcggtgtca
     1501 tacacgtttt gtgagatctg tgcctgaacc atgccgggca gatcggaatt gatgccgctg
     1561 atcagggttg cagggataac cgcaccgctg cggatcatgt aggcgttcgg acgttcgact
     1621 tggctctcaa gccgccagtt gtttccaccg ttttgtgccg tttgtctcgg gatattgccg
     1681 ggagtcggag gtgtgttcag gccgggcatg ccgcctgccc cttgtacgcc gtcctgacca
     1741 cctgcggcgg ccatctgttg ggcattggtc agttgttggt tgtaaacgcg ctccacttcg
     1801 gcgggattgg aaccggcatt ctcggacatg cgctgcactt cggcgatttg agccagcatc
     1861 tcgctacggt tgggtgtacc tgagccggaa gaagataagg cagcagtata taggccggac
     1921 gaaccccgag aagtcgatgc gacgacatcc actttggttg gggcagctag ggctgcttgg
     1981 aacatctgcg cttttgcctg ccggatttgt tccgcttcct gatccacttc gggaggtgtg
     2041 gccggaaggt tggccatatc gggaaccatc ggtaaagatg tgggcgcgga tgccggtaaa
     2101 tcaggcgcgg acgccatgcc gtcaggcagg gcgggcatgg ccggttcgga tgctttggcg
     2161 gtaatcagac cgccttcctg aggcagttcg ttcaataggg aatcggccat tcttgttgca
     2221 tccttaccgt ctccctgcgt tgcctgcccg gcagactgtt ggcctttagt tgctgccacc
     2281 agtgcaatca gcagggcgaa tccgagaaca acaccgccga cgatatagat cggaatgttg
     2341 ttcaggcggc gcacaccggg acgacggccg gaagtatccg gtgcgatcga aggggaacgg
     2401 gatgcgttca gcagatcttc ggtgctttgg ctcatgcttc agtctccacg tttagtccaa
     2461 gaaccggtcg gaaccacggc gccgttttcg gtttggcggt aggcacggga atagggcgtg
     2521 ccgtcaatgt agatcattac ccggtaaata tcggaatcaa cctgatccaa gacgtaattc
     2581 agtgattttt cgttttcgcc ctgttgggcg gttgtggcaa agcctttttc acgcaatgcc
     2641 tgatccagtt gcgtaccgaa ggtatcggat ttgctgcggt tcaggaagaa aacggtgttg
     2701 gccgccggaa attcttcttg gagtttttcc actacatctt gagttactga ggcggatacg
     2761 gcgtctgaac ggacgaaaga accgtattgc ccggtggcgc atccgccaac ggccaaagcc
     2821 agcgcgacga acaggacatt tgatttcatg atcggctccg tctgataacg actttggttt
     2881 gatggcggcc aacgccggtg atcatgatgg cttcgtcaaa caggctgtca acgatgtagc
     2941 ggtcttcgtg aagccggtaa ttgaccaagg tgttttcgcc gttacggacg accagcaagg
     3001 ccggagcttc cccttgggat aaagtcggcg gcatttggat gatggtgcgg gtgccgtcgt
     3061 tataaacgcg caaaggtttc catgacggat tgtggccgct gatggtgtag ttgaaatcca
     3121 agttttggat gttttctccg gtgggcagaa cctgagcttc ggcttgccgg gcttggtttg
     3181 cccggatcgc ccgccaacgc gcggcggtgt cttcgggata cgaaaaaccg acggcaggca
     3241 tataacgggt acggtgtgat ttgaggcgga tatgataggt tctgcggtcg gtggctatga
     3301 aaagcgtcgt ttgcaaaccg acatccagtg gtttaaccaa gatgtgcatt ctttcgttgc
     3361 cgttgctgcc ggaaattgcc ggagtgatat tccagcgtgc ggtatccccg gcgtgcagat
     3421 cgttaatcat ttcgccgggc tgtaaggcaa tgtcgcagac ctgcattacg gcacagacga
     3481 cagacggatc agagccgaag gcaaaggtga tgcggccgtt atcgccggga acgggcggta
     3541 cggccatcct gccgtcagaa gagtagtttt tggcgatgcc caagcctttt tgttcgtggc
     3601 ggttcagctt cgggttgtgg ctgccttcaa aatatttgtc ggcgtagctg tcggcaaagg
     3661 cggaagtgga caaagcggtg attaacgcca aggataaaat ctgtcttttc attgctgtac
     3721 cttgttacag ttcgttagac caagagaaat cacggataaa catgccgatg gggttcacaa
     3781 taatctgctg ctctgttgtc ggcggaacgt agtagatatt caacagcgca cgcatattct
     3841 gaggcggttt gagtaatttg ccgtcatggg cgcgagtggt ttccacccag tacacctgcc
     3901 aagagttgtc gctttgtctc agcaccgact tgatttccac gctgaccagt tctttttccg
     3961 cgcgtttgaa cggcgaagac tccggcgttc cgttcagcca ttcgttcatt ttggctgcgg
     4021 ccgcgtcttt cggattcagc atggcatagg tattgagaac gtatttgcgt tgcagggcta
     4081 tatcggtggt tacggtacgg gcattgccga tgaagctgcc gagcatggcg cggacaatcc
     4141 gctcatcggt tgcctgaggc tggtcggctc tggccacggc cacggtttcg cccaatttgt
     4201 tcacttcgac gatataaggg ataaatttcg actggctgcc gaggtaaatc atgcccccta
     4261 ccccgcccaa accaatcagc aggccggtca tgcccgccca ttgccacagc aggcgcgacg
     4321 aaaccatgtc gcccatgatg aagttccatt gtttcctggc gttcaaatag gggttttcgg
     4381 tcatttcgcg gtcggctttt tccctgccgc gaaaaatgtc tttcagtccc atcagtgttt
     4441 ccttctgtat ttgtccacat cgacatagtt atggatattg attccccggt tttgcagcca
     4501 gcggatcggc cagtcttccc cgtattggtc ggccgtctgc cgcattgcat tcagggtgtc
     4561 ggggtcggat acggcgacaa aggccaaggt cagcgggtca agagccagtt caaacagcct
     4621 gcggccgtaa ggcgaggtgt agtaatactg ccgcttggga atggcggtgg ccaaaatctc
     4681 aatctgccgc gcattcaagc ccatgcgcct gtacagttcc gaagcgtcct cttccctagc
     4741 gtgggcgttg ggcaggtaga ttttggtcgg acaggattcg ttcaggacat cgaggatgcc
     4801 ggagttggcc gcatcactga ggctttgggt cgcgagcaga acaaggcagt ttttcttacg
     4861 cagcactttc agccattcgc ggattttttc ccggaagaca ggatgcccca acatgatcca
     4921 tgcttcgtca aggaacagga ctgcgggatc gccggtcagg gctttttcga ttctgcggaa
     4981 cagatacagc ataatcggaa gcgcatattt ttccggcagg ttcattaact cttcgatctc
     5041 aaagcaggtg aagcgggaga agctcaagct gtcctgttcg gcatcgagca gataacccat
     5101 cgagccgtcg atggtgtagg ctttcaatac ttcgcgcatc tctacgtctt gcagggtgtt
     5161 tgaaagatcg gaaagcgaat aggactgttc ggctgcattg tttttgatgg cggtttcaat
     5221 ttcgttacgc tgttggggcg taaccttgag gccgttcaat tccataaccg cttccaccca
     5281 agacaaagcc caagcgcggt cggacgtgtt ttggataagc tgcatgggcg cgaaagacaa
     5341 accggaagcc gtgttgtctt catcgccaat gttgtagtgt gatcctccga cggcgcgggt
     5401 cagcgtttcc aaagaacggc ctttgtcgaa agaaaatacc cgcatgttcc ggtaacggtc
     5461 ggcctgagcg gccaaagtgg ccaacagggt agatttacct gcgccagtcg gcccgaaaac
     5521 caaagtgtgg ccgacgtcgc cgacgtgcag accgagatgg aacgggctgg agccactggt
     5581 aacaacctgc atcagcggcg gcgaattggg cggatagaac tggcaggggt tttcctccaa
     5641 gcccgtccaa atgctgctgg tcggaatcat gtcggcgaag ttcagcgtat tcagtaaagg
     5701 acggcggacg ttttcgattc cgtggccggg caggctgccc aaccatgctt ccatcgtatt
     5761 gaccgtctca acgcgggcat tgaagcccaa agtgttgatc tctttttcca cctgccttgc
     5821 catgctttcc aagaaagccc ggtcttcgtg catcaaaatg acaacgcttg tgtagtaacc
     5881 ctgtgccacc aagccggatt tggtttcggc caaggcggct tccgcgtcat ccaccattgc
     5941 ctgagcgtct tggtctatgg agccggaatg ggtgttgaac acctgatcga agaaaccgcg
     6001 tactttctgt ttccattttt tgcggtattt ctccaaatcg gcaaccgcct gatgctgatc
     6061 catgaagatg aagcggttcg accaccggta ctcgataggc atttctccga gccgcgtcaa
     6121 aatgcccggg taggactcca tcgggaagcc gtccagcgcg acgacttgga taaacttatc
     6181 gccgatcatc ggcacgacgc cggtgtagag ttcctgccca ccaatcaggc tgtcaatgta
     6241 catgggcgcg gccggaaggt tgatcggatg gtttttgccg gtaatgcaga aatgcagcca
     6301 gcgcaggaaa tcgtcttggg taatttccat gccgtcttcc aaaacgactt tatgggcgca
     6361 aagacggtgc aactccaagg aaatgctcag gttggattcc agattcgcac aagcctgttt
     6421 gaaatgagag agtgtgcggt cttgctgggc gcgtttacct tccttggcgt tgtcgtcatc
     6481 aaacatcagt tcggcgacct ttttttctgc cagtaagggc gggaaatagg tagcgacaat
     6541 gacgaagaaa ccttcataca gggtgccgat ggcctcaaat gcctgccgtc tttcgttatc
     6601 gatggcctct gtaacgtaac tgtcaaagta gttcctgcct gcctcggtat agtttggtgc
     6661 gggacggcgt gcggcatcga cgtgcaccat ccagccgctg cccaagccga caaacgcctg
     6721 attgatgcgt aaagatacgt cttcgcgctc cgctaccgtg ctgctgccca tgtctttgcc
     6781 gcgataaatc catgcagcca tcagggagcc atttttccct aagattacgc cgtcatcgat
     6841 tacggccgca tagttcagca aatcggccag cccttcttct ttcgagcggt gctgtttgag
     6901 tttggtggca ttggtaacgg cgcggatttt caggaacaga cccgtacaca gaaccaagcc
     6961 caaaaccgat atggccgaga taatcccaat gatcatttgt aacggtttcc ttgggttgaa
     7021 gtattgtttc taaacggtgt ggagtggggc ggataaaaac gtttgtactt ggtaatcgac
     7081 cgcaggccga caaaacgcag caaaggatcg tatttagcca gtttccggag tgcgtaaagc
     7141 gcaaaaaacc aaaataccaa gccgattacg aaagcatagg tgttttgcgc cgccaccact
     7201 aaaacaaaag taatcaaaag ggatacctga accatctcgc gatctccacc ccaaaagagg
     7261 ttgggacggt ttgccactct gcggatgggt atcgtgcgga tggctctcat ggttttatcc
     7321 tttcgacgcc aagggaagaa ggtaatgctg tgcggcctgc acggcagcgg taacttccgc
     7381 gccgccgaag aaagaggaca tcatgttttg cgctcctacc agcaaagcca ttaccaacac
     7441 aaggaaaatc aaagtgcgga aaaacgcgtt cagttcgccg ccgaagatca gtacgccacc
     7501 ggcaacgaca atgccgatga tggacagggc gaaagccacc gggccggtaa cggactggcg
     7561 gagattgttc agccagcttt catagggcag accgccaccc tgcccttgcg acgcgagcgc
     7621 gggcgaggac attaacagta agaagacggc cagtccgatg aagaacagcc atttttgttg
     7681 cgattgactc agagtcatat atttacctca cagatataac gtggttgtta aaaaatcgtt
     7741 cgttgcttat gaaaacatca gtattcaatc ccgctgttta aattgcctcc ctgttcctct
     7801 taaaggtaat caaacacata attgcctgac ttttcgtcaa gccccttaat tttgatgatc
     7861 tcacgtattt tgcggccggt tttctcgtct ttgccgatgg atacgatgta gtggatcact
     7921 tgcgccacca gcggccgtat cgctgccgga tgggcaggat tgcgggtaat caggctttcc
     7981 aagcgttcca gtcccaaggc ggcattgttt gcatgcagtg tggcgatgcc gcccgggtgt
     8041 cccgtgttcc aaatatccaa aagatccaag gcttccgccc cccttacttc gcctacgatg
     8101 attctgtcgg gacggtagcg gagcgcggtt ttcacaagtt tggttagatc gatgcttccc
     8161 gtggtgtaaa cctgcacttt gttttgcgaa tggcattgga tttccccggt atcctcagag
     8221 atgtagagac gctcattggg attctgctcc gacatgtcat agaggatggc gttaatcaac
     8281 gtggttttac ctgaacctgt tccgccgata accaagatgt ttccgtgctc actgactgca
     8341 ttgcggatgg tctgccgctg gctttccgtc atgattcctg ctgagacata ctcatccaaa
     8401 gtgaatacac gggcaggttt tttcctgatg gtaaaagagg gtgatgcggt taccggcggc
     8461 aagatggccg taaaacgact cccatcgatg ggaaattggg actccaagat aggaaggtct
     8521 tcggtgatta ctttgccgtg ataaccggca acggttttaa taaccgcttc cacgcgggag
     8581 gttttgaacc aatcgctcaa cctctcgtca tagaccatct ccttgccttg ctcttcccag
     8641 taaacagaca cgccgtttcc ggtctgtttt ggattgaaca tcacttcaac caagtttgga
     8701 ttcatgaact tttccaaaaa ctcatttccc aaatcacgct ttagtttgtt caatgcccgt
     8761 tctttgcggg agtctgctgt ttccgtcgtt tccatcatta agagaaccat acaatagagt
     8821 tgatacaata tattgaattc aataaaatgt aaagtctaat tgttcaagag caaaaaaaaa
     8881 gcccatatct ggcagatatg ggataaaata acctaatgaa tgttgctatt tggtttcttt
     8941 tgccaaaatc tttaaggcat catcgttcca ctttttaact tggaatgcct tataacgcgg
     9001 caaaatgacc gtaatcttct cgtaattagg cgggagtgtt gattgacttc catctagaag
     9061 ggaaaggctc tccggatcaa gatcgtggtg ttcgagcaaa tagctcaacg ggacatcaag
     9121 ggcgtaagca atggccgaca tggtttccaa tgtcggattg ccctgccctc ttgtaattcc
     9181 cgacattgaa gacggggaca aattcgccct ttctgccaaa tcttggtggg acagattctt
     9241 ttcggatgca agacgcagaa cattagtgaa gaatattttc gaataactca tggaatttta
     9301 gccgctaaaa tttttaaccg taagtatagc aaagtaacct aggaggcaga atgaataaat
     9361 tcatcatttc aggcagaaca accaaagatt tgactttgga gcaaactgca acaggagttt
     9421 ttacaaccag tattcctttg gcagaaaact atttttacac caaggatggg aagaaagttg
     9481 aggccacaaa ctatttttgg atagatgtat atggagaaca ggccaagaac gccgtcaggt
     9541 attgcggcaa aggttccctt atcctgatag aaggaaggat aagcaataac aactatgaaa
     9601 aagatgggca aaaaatctat aaagaccaga tgattgccag ccgtattgaa tacagcaacc
     9661 tcaaaccccc tgccggacgg gaagaatcat cagacccctc atttatctac gaccccgaac
     9721 aagacttagg ataaattatg aaaaatgttc aggaagtgct tccttatttg aatttagtcg
     9781 ccgaacgcag ggatgaagcc caaagggaag aatacttgaa atcaaaaggc attccgacag
     9841 acgacaacct tattatagag gatttgtttg gaaatactat ctttggttca aagcatagag
     9901 cgatgccgaa cgatttcgcc cgatcatgtt tgtttacagc aagaaatcat cgggtgccga
     9961 gaaaaacttt ctcccgtgaa aaacttttcc atatctcaga aaaagtagag atcctttaca
    10021 caggtaccga gctccgttca gtggatgacg agctgatatg gatgcagctt gtagattact
    10081 gccgtcgttt ccctctgggg aattacgtcg aatttgacat caggcagctt attaaggaca
    10141 tcggatggga taccagcgga gcctattata aacgtgtccg ggaatctttg agcagaatga
    10201 aagcgacaga gatctatatc aaaaacggaa atacctacgg cgtcagcgga ggtatttccc
    10261 ttattgacaa ttatgtcgga attgaaaaca tcaaaggcga accgacacgt tacaaagtca
    10321 gcatcgataa aaaactaatc gtgctttttg ccggaaacac attttccaac atcccttgga
    10381 gtcaatacaa aaaactttct ccaatggcta ggcggctcac cgattatgtc tttagccaca
    10441 aacatcccaa ccctatacct attcctgcat ttttagcaat gtgcggcagc gaccaaatca
    10501 actccccagc gaaaacgcaa aatcaaaatg ctaaaaagat ttgtgccgaa ctcaccgagg
    10561 cgcagttggt aaaaactgcc tttgtattat ccgggaagat tatcgtcgag cgttaaaatt
    10621 atccacaagc acggatttac acatgcccca aacaggccat ttgcggattt acacatgcca
    10681 aaaaacagca aattttcact gtttgcggac ttacacatgc catttgcgga tttacacatg
    10741 ccgatggccg gtttgacaaa aataccaaaa tatgcaggtc aagatatgcg ataaaaatta
    10801 aaaaacaaac agacaaaata aatataaaaa acctatttta aaaatcaaaa ctgtggataa
    10861 cctgtgcata acattcggta tcgcctaaaa tatgagcaaa atttacggat ttacacatgc
    10921 ttttaggaca aaatatccta attcccttgc ggatttacac atgctaaatc gcggatttac
    10981 acatgctaaa tcgcggattt acacatgccg ccatgtttgc aacatactga atattaattg
    11041 aaaaaaaccg cttttttttg ccctaaccat ttataaccat ttataaccat atttcgcgac
    11101 cgaaaagccg gttttatcaa tttgctgtcg cctacggcga ttttagataa tttcataaat
    11161 tcgtctgtcg ccctacgggc gatttagatc tttttcattt tactccaagg gtaaattgcc
    11221 gagaactttc aaatgaccga tttaatttct accaccgtat tacttactcc ttaccaagca
    11281 tttcaagcaa agaaatggca tcttcaaaat attgaagagc ataacttgat acaaaaaaaa
    11341 gacctgaata tccgtccaga atgtttccac cggtttccgc aatgggcagt ccctacggct
    11401 gatgaggtca aagaattgtg gttagcaacg ggaatgactc aaaaacaagt tagcaggtat
    11461 ttagggttga aagacaccaa tggtagagct ttcaggagat tcatcagtgg ggaatcatcc
    11521 atcacatatg cctattgggt tttattgagc ttgtatgtgg gtattgagaa attttggtaa
    11581 ataaaatttt agccgctaaa attgcttgac aaataggata atttatccta taatacaaac
    11641 tatatcggac ggaggctcct atggacagaa ttaaatccaa agctggaaaa aaaatgtttg
    11701 aagtggttta tatggtgtta gctatcgcct atttgctttt ccctgtccga tggtttgctt
    11761 ggatgtacag tttctatgtt ttgtgccaaa tgctgtacca ctggaatatg gctgattcat
    11821 ggatttatat cggcaaattt atcttgacgt tcggtatcgt aatgggatgg ctcacttttg
    11881 ttatcgcgtt cagaaataaa atatgaggtg taggaatgaa gattttagtg gtggcaaacc
    11941 aaaagggcgg ggtaggaaaa acggctatgt cgcttcatct tgcctggcat atggaaacag
    12001 ttggactgag ggttttagta attgatttgg atacgcaggg gaatgcgagt tactctcttc
    12061 gagacaaaac gtgtcttttc ggttccggcc gtttgtttgg aaatatggaa gatgcggatt
    12121 tacatatgcc cggcaacgtt tcactggctc tttccccggc gacaaacgat ttggctaacg
    12181 tgcagaatat gactttgcaa aatgctgttc agtcttttac gcaaaacatc gacaaattaa
    12241 aagcgggcgg gcaattcgat gtctgtatta ttgatactcc gcccagttta ggtaacacgt
    12301 tggcggctgc actggcggcc ggggattatg tgttatgtcc gatcgagttg gaaacataca
    12361 gcctacaagg aattaaacag atggctgcaa caataggcaa tatcagaaaa gtgaacagca
    12421 aattggcttt tttgggtata ttgccaagta aggtcgatat gaggaatccg cgccataaaa
    12481 ggcatttgga agaaattaaa atgcagtata atgaaattgt aataccgcat attatcggat
    12541 tgaggagcag tatcgcagat gcgttgtctt ccagcctgcc ggtttggaaa atcaagaaaa
    12601 cggcagcaag aaaggcggcg caggaaatga aagccgtttc taactatgtt ttaaacaaaa
    12661 tgcaagggta aaatttatga ataacagtaa tttgggtttg gaaaacatcg gcaatctcag
    12721 cgaacttttg ggtaatgcag aggtctcatc agggacgccg ctgcgcctgc cccttgcttc
    12781 aatcaaagaa gaccccgatc aaccaagaaa agaatttgac gaaggaaaaa ttcaggaact
    12841 agcaaacagc attcaggaga gaggcgtgaa aacacccata tcggtgcgtc aaagttccga
    12901 agaaggggtc tatgtcatca accacggcgc acgacgttac agggcttcat tgctggcagg
    12961 gctgagcgag attcccgcat atatcgatca agattacagc ctgatcgatc aggctgttga
    13021 aaatatccag cgcgataatc taacgccaag ggaaatcgcc gacgtaattg gccgattgct
    13081 ggcagagggg atgaaaaagg gacagattgc cgaaaaaatg ggcaaatccc ctgctttcgt
    13141 tacccagcat gcaaacctgc tggacttacc cgaacctctg gccaacgcat tcaactcggg
    13201 gaaagtatcc gatttgacgg taatcaatga cctgaacgca ttgtataaaa aagaaccgga
    13261 agcggtggaa gatttgctgt ctaacgaaga cgagattacc cgtagttcgg taaggaattt
    13321 gaaagagttt ttaaactcgg atcctaaaaa ttctgctgat gccgatcatg aaaagccatc
    13381 caaggcaaaa gtgaaagaga aaaagccgga agatcctgac aaactgaaaa aagctattgt
    13441 gcaggtaatg tatcaaggcc aactggcaag gctggttttg aacaagcgcg gattgtctgg
    13501 cgatgaggta tggattaagt ttgaggagtc cggcgaaaca gaatctgttc cttgtaaaga
    13561 aatttccggg attgttgcag ttattgaagg ataatactgg gaatttatta taataccccc
    13621 ccgttttaac gggctgccca gttttactgc tgccggtatg tgcaaaatac cgaatcagca
    13681 ggttgatcag aattcattaa attaaatcat tttaaaatca
//
LOCUS       DAXFZM010000063        13602 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.063, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000063 DAXFZM010000000
VERSION     DAXFZM010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13602)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13602)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13602
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.063"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(82..1209)
                     /locus_tag="ACFJAG_001522"
     CDS             complement(82..1209)
                     /locus_tag="ACFJAG_001522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HFC3980780.1"
                     /translation="MKIVFITTVASSIYGFRAPVIKKLIGKNHQVYAFVSEFSDNELD
                     IIREMGVTPVTYRSNRSGLNPFSDIKSTFLIFKALKKISPDLVVPYFAKPVIFGTFAA
                     KLAGVPRIVGMLEGLGFAFTPQPEGIPLKTKIIKGILIALYRITLPMLESLIVLNPDD
                     KDELLHQYGIKIKNIHILGGIGLDLRQYPYSEADIPDEKEPVKFLFIGRFLKEKGIDE
                     FIRAAEQVKGKYPDTVFTALGAIDKPRGSGDLEQPAARDIIRFPGFVNNVSEMIKEHH
                     IFVLPSYYREGVPRSTQEAMAVGRAVITTDVPGCRETVADKVNGFLIEPWNPRILAEK
                     MIYFIENRAAVRLMGNASYAIAKDKFDAEKVDLKFLDILKA"
     gene            complement(1436..1558)
                     /locus_tag="ACFJAG_001523"
     CDS             complement(1436..1558)
                     /locus_tag="ACFJAG_001523"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980781.1"
                     /translation="MPSETFRRHFPNTPPVAGLHGTQISLIKPQITAAIKPPFK"
     gene            complement(1563..2788)
                     /locus_tag="ACFJAG_001524"
                     /pseudo
     CDS             complement(1563..2788)
                     /locus_tag="ACFJAG_001524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259190.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            complement(3181..4428)
                     /gene="fabF"
                     /locus_tag="ACFJAG_001525"
     CDS             complement(3181..4428)
                     /gene="fabF"
                     /locus_tag="ACFJAG_001525"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HFC3980782.1"
                     /translation="MSQRRVVITGLGQVSPVGNTAAEAWDNLLAGKSGIGAITRFDAS
                     DINSRVAGEVRGFDIGQYISAKEARRMDVFIHYGIAAALQAIADSGLDDVENLDKDRI
                     GVNIGSGIGGLPSIEATGKAVIEGGARKINPFFIPGSLINLISGHVTILKGYRGPSYG
                     MVSACTTGAHAIGDSARLIKYGDADIMVAGGAEGAISTLGVGGFAAMKALSTRNDDPA
                     TASRPWDKGRDGFVIGEGAGILVLEELEHAKKRGAKIYAEIVGFGMSSDAYHITAPNE
                     EGPALAVTRALKDAGINPEDVDYVNAHGTSTPLGDANETKALKRAFGEHACKTVISST
                     KSMTGHLLGAAGGVEAVYSILAIHDGKIPPTINIFEQDVEAGCDLDYCANEARDAEID
                     VAISNSFGFGGTNGTLVFKRFKG"
     gene            complement(4584..4820)
                     /gene="acpP"
                     /locus_tag="ACFJAG_001526"
     CDS             complement(4584..4820)
                     /gene="acpP"
                     /locus_tag="ACFJAG_001526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HFC3980783.1"
                     /translation="MSNIEQQVKKIIAEQLGVNEADVKNESSFQDDLGADSLDTVELV
                     MALEEAFGCEIPDEDAEKITTVQLAIDYINAHNG"
     gene            5052..6059
                     /locus_tag="ACFJAG_001527"
     CDS             5052..6059
                     /locus_tag="ACFJAG_001527"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004152 - dihydroorotate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006222 - UMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HFC3980784.1"
                     /translation="MYPLARRILFALDAEKAHHFTLDALNTVYKLGLIPVTDNRTKPI
                     KLMGMDLPNPVGLAAGLDKNGEYIDALGALGFGFLEIGTVTRNPQPGNPQPRLFRVPE
                     HQGIINRMGFNNHGIDAMIRNIEKSKYQGVLGINIGKNAVTPIQNAADDYLICLEKAY
                     AHASYITVNISSPNTKNLRALQGGGELGALLEALKNKQAQLAAAHGKYIPLAVKIAPD
                     LDEAQIEDIARVVKSVEMDGIIATNTTIDKSSLGSHPLAGEQGGLSGFPVREKSNRVL
                     KKLAEHIDGALPIIGVGGIMEGGDAAEKIRLGTTAVQVYSGLIYKGPALVKECLKALA
                     R"
     gene            6256..6729
                     /locus_tag="ACFJAG_001528"
     CDS             6256..6729
                     /locus_tag="ACFJAG_001528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2247 family protein"
                     /protein_id="HFC3980785.1"
                     /translation="MNLDLTAQKVRLSWKDILWGYENKYLGWADVAAYARKMTLSDHD
                     ERVFKLSLTNKSNILELKPVLEDLASETRGYSPKNWLYILLNDVFHRKEEFEDPLGEV
                     EKIYADFDYPEEIESFVRYMPPKDGYIPSNHSYEENIARLYSHWEHYLNNGGGQG"
     gene            6743..7078
                     /locus_tag="ACFJAG_001529"
     CDS             6743..7078
                     /locus_tag="ACFJAG_001529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980786.1"
                     /translation="MPSEALSGVQTAFCFPTVYKLSLFLDRNNDLIYLKRLEDMIMGF
                     WGSVGKAAKAVGEGLIEAGNEHKALKMEYAEKSSEELHEIVKSDGFFKNSTREKGAAY
                     AVLKERGEV"
     gene            7272..9962
                     /gene="glnE"
                     /locus_tag="ACFJAG_001530"
     CDS             7272..9962
                     /gene="glnE"
                     /locus_tag="ACFJAG_001530"
                     /EC_number="2.7.7.42"
                     /EC_number="2.7.7.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008882 - [glutamate-ammonia-ligase]
                     adenylyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional [glutamate--ammonia
                     ligase]-adenylyl-L-tyrosine
                     phosphorylase/[glutamate--ammonia-ligase]
                     adenylyltransferase"
                     /protein_id="HFC3980787.1"
                     /translation="MSDHRLDTARRHSLFLARQLDNGKLKPEIFLPMLDKALTDEDFQ
                     AFADWDKIRAEESEEELARQLRELRRYVVSQIIVRDINRISDLNEVTRTITLFADFAV
                     NTALDFAYAYYQDMYGTPIGRYTKSPQHLSVVAMGKAGGYELNVSSDIDLIFVYPESG
                     DTDGRRERGNQEFFTKVGQKLIALLNGITADGQVFRVDMRLRPDGDSGALVLSETALE
                     QYLITQGREWERYAWCKGRVVTPYPNDIKSLVRPFVFRKYLDYGAYEAMRNLHRQIRS
                     EVSKKGMADNIKLGAGGIREVEFIAQIFQMIRGGQMRALQLKGTQETLKKIAEMGIMP
                     SENVETLLAAYRFLRDVEHRLQYWDDRQTQTLPISPEQRQLLAESMGFDSYAAFSDGL
                     NVHRNKVNQLFNEILSEPEEQAQSNSEWQWAWQEKPDEEERLGRLKEHGFDAEAVTAR
                     LEQICHGHKYRRLSAHAQPRFDTIVPLFVQAAAEQNNPTDTLMRLLDFLENISLRSAY
                     LAFLNEHPQTLAQLAQIMSQSSWVAAYLNKYPILLDELISAQLLDTAFDWQALAAALS
                     DGIEACGGDTEAQMDTLRHFQHAQVFRLAVQDLAGLWTVESLSDQLSALADTVIAAAL
                     SCAWADMPKKHRDTPQFAVIGYGKLGGKELGYASDLDLVYLYDDPHPEAGDVYSRLAR
                     RLTNRLSAATGAGSLYETDLRLRPNGDAGFLAHSIAAFGKYQRENAWTWEHQSLTRAR
                     FICGTPEIQTAFDRIRTEMLTAERDQTALAGEIIEMREKMFPTHPPADSNVKYARGGV
                     VDVEFIVQYLILAHARQYPQLLDNYGNIALLNIAADCGLIDKTLAGQSRTAYRLYRRQ
                     QHNTKLRDAAKTEVSDELLSHYGNVRKLWREVFGEEAATA"
     gene            10386..12593
                     /gene="uvrD"
                     /locus_tag="ACFJAG_001531"
     CDS             10386..12593
                     /gene="uvrD"
                     /locus_tag="ACFJAG_001531"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006268 - DNA unwinding involved in DNA
                     replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase II"
                     /protein_id="HFC3980788.1"
                     /translation="MFPDQSAPNLLQGLNPEQLSAVTWPPQSALVLAGAGSGKTRVLT
                     TRIAWLLQSGQASVHSIMAVTFTNKAAKEMQTRLGAMIPINVRAMWLGTFHGLCHRFL
                     RLHHRDAGLPSSFQILDSGDQLSLIKRLLKSLNIAEEIIAPRSLQGFINAQKESGLRA
                     SVLGAPDPHTSRMIGCYAEYDKICQREGVVDFAELMLRSYEMLQSNEILRRHYQNRFN
                     HILVDEFQDTNKLQYAWLKLMAGGNAAVFAVGDDDQSIYRFRGANVGNMTALMEEFHI
                     DAPVKLEQNYRSVGNILAAANAVIENNDERLGKNLRTDAEAGDKIRYYSAFTDLEEAR
                     FIVDETKALEREGWDLDEIAVLYRSNAQSRVIEQSLFRSGIPYKIYGGLRFYERQEIK
                     HALAYLRLAVNPDDDNALLRVINFPPRGIGARTVENLQTASNEQGITLWQAACNAGAK
                     AAKVVAFVRLIEALRNQVGQMHLSEIIVGILKDSGLTEHYRTQKGDNQDRLDNLDELV
                     NAAIEFKPEDSNFETLPENISDDPAFPILAFLSNAALESGENQAGAGEKAVQLMTVHA
                     AKGLEFNAVFLTGMEEGRFPSEMSLAERGGLEEERRLMYVAITRARKRLYITMAQQRM
                     LHGQTQFGIASRFVEEIPPEVLHYLSVKKPAFDSYGNTRQTTVQRDKIIDDFKQPQTY
                     AGFRIGQNVRHAKFGTGVIIDAADKGESARLTINFGKQGVKELDTKFAKLEAM"
     gene            13321..13446
                     /locus_tag="ACFJAG_001532"
                     /pseudo
     CDS             13321..13446
                     /locus_tag="ACFJAG_001532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611093.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
BASE COUNT         3231 a         3763 c         3676 g         2932 t
ORIGIN      
        1 ctttcgcggg aatgacgggg tttcgcggga atggcgggag tttgtcagaa atcaccgaaa
       61 ctcaaaagcc gaccaccttg tttacgcctt caaaatatcg agaaatttca aatcgacttt
      121 ttcggcatcg aatttatctt tggcaatcgc ataacttgca ttccccatca ggcggacggc
      181 agccctgttt tcgataaaat aaatcatttt ttcggccaag atgcggggat tccaaggttc
      241 gatcaggaag ccgttgacct tgtcggcaac cgtttccctg catccgggga catccgtcgt
      301 aatcaccgcc ctgccgacgg ccattgcctc ctgggtgctc cggggaacgc cttccctata
      361 ataagacggc aatacgaata tatgatgttc ttttatcatt tcggaaacat tgttcacaaa
      421 accggggaaa cggataatat cgcgggcggc aggctgttcc aaatccccgc tcccgcgtgg
      481 tttgtcgatt gcgcccaaag cggtaaaaac cgtatcgggg tatttgccct taacctgttc
      541 cgccgcccga ataaactcat caatcccttt ttctttcaga aatctgccga taaagaggaa
      601 ttttacgggt tctttttcat cgggaatatc cgcctcggaa taaggatatt gccgcaaatc
      661 cagaccgatt ccgcccaaaa tatggatgtt ttttattttg atgccgtatt gatgcagcaa
      721 ctcgtctttg tcgtcggggt ttaatacaat caggctttcc aacatcggca gggtaatgcg
      781 gtacaaggcg attaaaatcc cctttatgat ttttgttttt aacggtatgc cttccggctg
      841 cggggtaaat gcgaatccca aaccttccag catcccgacg attctgggca cgcctgccaa
      901 ttttgcggca aaagtgccga aaatcacggg ttttgcgaaa taagggacaa ccaaatccgg
      961 cgatattttt ttgagtgctt taaatatgag gaaggtggat tttatatcgg aaaacgggtt
     1021 tagcccgctg cggtttgacc ggtaggtaac gggtgtaacc cccatttccc tgataatgtc
     1081 caactcatta tcggaaaact ccgatacaaa ggcatacacc tgatggtttt tgccgattaa
     1141 ttttttaatg acgggggcgc ggaaaccgta aatgctggat gcgactgttg tgataaaaac
     1201 gattttcata aggcggacac cttgaatata ggattggaaa tgcggtctgc attgatgaaa
     1261 tgccggatac ggggcgcggc gggcaaacct ttgccaagcg cgccgcatcc gacgcttcgc
     1321 ccgcccgggc aggggcggct tcagacggca ttttatcctg aaatccgctg cataacgccc
     1381 agcgatatac agtatcgcgt tttgtgatga ttttacaccc gaagggaaaa cgggcttatt
     1441 tgaatggcgg tttaatcgcg gcggttattt gcggtttgat aaggctgatt tgcgtgccgt
     1501 gcagtccggc aacgggcggg gtgtttggaa aatgccgtct gaaggtttca gacggcattc
     1561 tgtcatgcgg cggttcgggg ttcgcggacg ggcaggacaa gcagggctgc cgtgccggcg
     1621 agtacggcat cggcgtacca catccagccg tagtcaccga attgtgtaat cacgatgccg
     1681 ccgatgtacg agccgaggaa tccgccgatt tggtgggtga gcatcaccag tccgaacagg
     1741 gtggcgaggt agcgcgtgcc gaagagtttg ccggtaacgg cggcggtcgg ggcgacggtg
     1801 gcgagccatg tgaatccgag tgcggcggcg aaaatgtaaa agttgaggtc ggttttgggt
     1861 gagaagatgt aaatcagcac catggcgacg cgtgaggcgt agagtccgaa caggatgtgt
     1921 tttcctttga agcgtccggt gcatcagcct gagaacacgc aaccggcgat gtttgccagt
     1981 ccgatgatgg cgatggatgt cgaggcgacg gtggcgggca gtccgcacag ggcgacttcc
     2041 gtgggtaggt gggttacgag aaaggcgatg tggaagccgc aggcgaaaaa gctcaggtgc
     2101 agcaggatgt agcttggggt tttgaaggcg gttttgactg cttctccgag gctttgtccg
     2161 tgtgtggctt gggtgtgttg ggtgtgggcg gcgttgttgc cgccggcaag ccaccatgag
     2221 acgggcagaa tcagcagggc gattgcgccc caaacgtaaa atgtacccgt ccagccgact
     2281 tcgggcagga cgacgagtcc ttgagtcctt gaaccagcgg tgcgaacagg aattgtcctg
     2341 ccgaaccgcc tgcgttgacc agtccggatg ccaagccgcg tttgtgtgtg gggacttggg
     2401 cggcgacctg tcccataatg atggaaaacc cgccggaacc ggtgccgaat gcgagcagca
     2461 gcccgacggc aatcatcagc ccccaataag tcgggatgtt ggaggcaatc aggcaggcgc
     2521 agacgagcag gagggcaccg ccgcttaata ccctgaacgc gccgaaacgg tcggcaagcg
     2581 cgccggacaa tggttgcaat acgccccaca tcagttggaa aacggcgatg atgaggctga
     2641 actgggcaat gttcaattcg gtggtgttga cgacgggttg gacgaacagt ccgagcgtca
     2701 tcctcatgcc gatggtaatc agcaggatga atgcggcggc ggcaatgacc gcccagagtt
     2761 tgggtgtttt cgatgcggtg tgcgtcataa tatgtatttt gagtcggtta agtttgcgaa
     2821 ttttaacaaa ccggatgatt cgggctaaat aattcctgat tctttggata tagccaacgg
     2881 tatgtctgcc gatgccgtct gaaagggctt gatgggcgtt tgcggttcgg gttaatattt
     2941 gtgccgtatt tgttaattcc agttagtata gtggattaac tttaaaccgg tacggcgttg
     3001 ccccgcctta gctcaaagag aacgattccc taaggtgctg aagcaccggg cgaaccggtt
     3061 ccgtaccatt tgtaccgtct gcggcccgcc gccttgtcct gatttttgtt aatccactat
     3121 aaaaatgccg tctgaaacgg tttcagacgg catttcgatg tcggcggcgg ctttgcggaa
     3181 tcagcctttg aagcgtttga agaccagcgt accgttggtg ccgccgaagc cgaaggagtt
     3241 ggaaatggca acgtcgattt ccgcgtcgcg cgcttcgttg gcgcagtagt ccaaatcgca
     3301 gccggcttca acgtcttgtt caaaaatgtt gatggtcggc gggattttgc cgtcgtgtat
     3361 cgccaaaatg ctgtacacgg cctccacgcc gcccgccgcg ccgagcaggt ggccggtcat
     3421 ggatttggtc gagctgatga cggttttgca ggcgtgttcg ccgaacgcgc gtttgagggc
     3481 tttggtttcg ttggcatcgc ccaagggggt ggacgtgccg tgcgcgttga cgtaatccac
     3541 gtcttcggga ttgatgccgg catctttcag cgcgcgggta acggcaaggg cggggccttc
     3601 ttcgttcggc gcggtgatat ggtaagcatc ggaactcatg ccgaagccga cgatttcggc
     3661 gtagattttc gcgccgcgtt ttttggcgtg ttctaattct tccaacacca atatgcccgc
     3721 gccttcgccg atgacgaagc cgtcgcggcc tttgtcccac ggacgggaag cggtggcggg
     3781 gtcgtcgttg cgggtggaga gggctttcat cgcagcaaaa ccgcccacgc ccaaggtgct
     3841 gattgcgcct tccgcgccgc cggcaaccat tatgtccgcg tcgccgtatt tgatcagtcg
     3901 ggcggaatcg ccgatggcgt gcgcgccggt ggtacaggcg gaaaccatgc cgtagctcgg
     3961 gccgcggtag cctttgagga tggtaacgtg tccggaaatc aggttgatca gcgaaccggg
     4021 gataaagaaa gggttgattt tgcgcgcgcc gccttcgatt acggctttgc cggtggcctc
     4081 gatgctgggc agtccgccga tgccggaacc gatgttcacg ccgatgcggt ctttgtcgag
     4141 gttttccaca tcgtccaaac ccgaatcggc aatcgcctgc aatgcggcgg cgatgccgta
     4201 gtggatgaac acgtccatcc ggcgcgcttc tttcgcgctg atgtattgtc cgatgtcgaa
     4261 accgcgcact tcgccggcga cacggctgtt gatgtcggat gcgtcaaagc gggtaatcgc
     4321 gccgatgccg cttttgccgg cgagcaggtt gtcccaagcc tctgcggcag tgttgccgac
     4381 aggggaaacc tgacctaagc ctgtaatgac tactcttctc tgactcatga taacctcgct
     4441 gttggttgtc ggaatggggg catatgcggc tgtcgtgcag atgccgtctg taatttgcgg
     4501 caggggttca aacagtttgc catataaggg aaaagcctct attgcgcggt gcagcagagg
     4561 ctgttgtgtc gggcgacgac cggttagccg ttgtgggcat tgatgtagtc gatagccagt
     4621 tggacggtgg tgattttttc ggcatcttcg tcggggattt cgcagccgaa ggcttcttcc
     4681 aaagccataa ccagctccac ggtatccaaa gaatccgcgc ccaagtcgtc ttggaaggaa
     4741 gattcgtttt tcacgtcggc ttcgtttacg cccagttgtt cagcaataat tttcttaact
     4801 tgttgttcga tgtttgacat atcagtcgtt cctttatgcc ttgcggcagg ttgtttaagg
     4861 gaaataaatc ggtggtattg taccgatttt taatagagtt ttctatctaa tgcctattat
     4921 atcaatattt gcggatttgt acatttttgg gtgcggcggg ttttgtcgtt caagtttgac
     4981 ctgtgtgccg tatgtttggc gggatttcgg ttaaaatggc ggcatttcca tctgaagcag
     5041 aaagccctgt catgtatcca cttgcccgcc gcatcctgtt tgcactcgat gccgaaaaag
     5101 cccaccactt cacgctcgac gcgctcaaca cggtttataa attgggcctg attcccgtaa
     5161 ccgacaaccg taccaaacct ataaaactga tgggtatgga tttgcccaac cctgtcgggc
     5221 ttgccgcagg tctcgacaaa aacggtgaat acatcgacgc tttgggcgcg ctcggtttcg
     5281 gcttcctcga aatcggcacg gttacgcgca acccgcagcc cggcaacccg cagccgcgcc
     5341 tcttccgcgt tcccgaacac caaggcatca tcaaccgaat gggttttaac aaccacggca
     5401 tcgacgcgat gatacgcaat attgaaaaaa gcaaatatca aggcgtattg ggcatcaaca
     5461 tcggcaaaaa cgcggttacg cccatccaaa acgccgccga tgattattta atctgcctcg
     5521 aaaaagccta cgcgcacgca agctacatta ccgtcaacat ttcctcgccc aacaccaaaa
     5581 acctccgcgc gctgcaaggc ggcggcgaat tgggcgcatt gctcgaagcc ctgaaaaaca
     5641 aacaggcgca gcttgccgcc gcccacggca aatacatccc gctagccgtc aaaatcgccc
     5701 ccgatttgga tgaagcacaa atcgaagaca tcgcccgcgt cgtcaaatcc gtcgaaatgg
     5761 acggcatcat cgctaccaac accaccatcg acaaatcaag cctcggcagc catccgctcg
     5821 caggcgagca gggcggtttg agcggttttc ccgtgcgcga aaaaagcaac cgggtgctga
     5881 aaaaactggc ggaacacata gacggcgcat tgccgattat cggcgtaggc ggcattatgg
     5941 aaggcgggga cgcggcagag aaaatccgct tgggcacgac cgccgtccaa gtgtacagcg
     6001 gattgatata caaaggcccg gcgttggtca aagaatgttt gaaggcattg gcgcgatgac
     6061 gcgccccacc caaaatgccg tctgaacgca cgttttgccg ttcagacggc attttcatag
     6121 attggtatcc gactgttgaa gaggcaatca gccgtcattt ggaagacttt tcgtaacagg
     6181 cgtcaatcga aaggggcgga atgacggggc aggcaaaccg atgcgtgaac acggggcagg
     6241 caaccggagt aaaaaatgaa ccttgattta accgcgcaaa aagtccgcct ttcttggaag
     6301 gatattctgt gggggtatga gaataaatac ttgggttggg ctgatgtggc agcttatgcc
     6361 cgaaaaatga cgctttcaga tcatgatgaa cgcgtgttca agctatcttt aaccaataaa
     6421 tccaatattc ttgaattaaa gcctgttcta gaagatttgg cttcggaaac gaggggttat
     6481 tcccctaaaa attggctgta catcctccta aatgacgtat tccatagaaa ggaagaattt
     6541 gaggatcctc tgggggaagt tgaaaaaatt tatgcggatt ttgattaccc ggaagaaata
     6601 gaatcatttg tcaggtatat gccgcccaaa gacggctata tcccttctaa tcatagttat
     6661 gaagaaaata ttgcccggtt atattctcac tgggaacact atttgaacaa cggcggcggg
     6721 cagggttaaa accggcaatc cgatgccgtc tgaagcgtta tccggcgttc agacggcatt
     6781 ttgttttccg acagtttata aactgtcgtt gtttcttgac agaaacaacg accttattta
     6841 tttgaaacga ttggaggaca tgattatggg tttttggggt agtgtgggaa aagcagcaaa
     6901 agcagtaggc gagggattga ttgaagccgg caatgagcat aaggcgttga aaatggaata
     6961 tgcggagaaa tcaagtgagg agctgcatga aatcgtaaag agtgatggtt tttttaaaaa
     7021 ttccacacgg gagaaaggtg cggcttatgc tgttttaaaa gagcgtggcg aggtttgaac
     7081 gggaaacggc ggcatttgcc gctgtttttt tatcggcagg catccgtccg aatatcgggg
     7141 caaggtttca gacggcatcg aaggttgcta tgatatagtg gcttgacttt aaaccggtac
     7201 ggctccgcct tgccctgatt tgaagttcat ccgctatcac attcccgcca tcctttcaaa
     7261 cggaatccga aatgtccgac caccgcctcg acaccgcccg ccgccattcc ctgttcctcg
     7321 cccgccagct cgacaacggc aaactcaagc ccgaaatttt cctgcccatg ctggacaagg
     7381 cgttgacgga tgaggatttc caagcctttg ccgactggga caaaatccgc gcggaagaaa
     7441 gcgaggaaga attggcgcgg cagttgcgcg agttgcgccg ttatgtggtg tcgcagatta
     7501 tcgtgcgcga tataaaccgc atcagcgatt tgaacgaagt tacccgcacg attacgctgt
     7561 ttgccgattt tgccgtcaat accgcgctgg atttcgccta cgcctattat caggacatgt
     7621 acggcacgcc gatcgggcgt tataccaaat cgccgcagca tttgagcgtg gtggcgatgg
     7681 gcaaggcggg cggctatgag ctgaacgtgt cttccgacat cgatttgatt ttcgtctatc
     7741 ccgaatcggg cgacaccgac ggcaggcgcg aacgggggaa tcaggagttt tttaccaaag
     7801 tcgggcagaa actgattgca ttgttgaacg gcattactgc cgacgggcag gtgttccgcg
     7861 tcgatatgcg gctgcggccg gacggtgatt cgggcgcgct ggtgttgagt gaaaccgcgc
     7921 tggagcaata tctgattacg caggggcgcg aatgggaacg ctatgcgtgg tgcaaaggcc
     7981 gcgtagtcac gccgtatccg aacgacatca aatcgctggt gcgccccttc gtgttccgca
     8041 aatatctgga ttacggcgcg tatgaggcga tgcgcaacct gcaccgccaa atccgcagcg
     8101 aagtcagcaa aaaaggcatg gcggacaaca tcaaactcgg cgcgggcggc atccgcgagg
     8161 ttgaatttat cgcccagatt ttccagatga tacgcggcgg ccaaatgcgc gcgctgcaac
     8221 tgaaaggcac gcaggaaacg ctgaagaaaa ttgccgagat gggcattatg ccgtctgaaa
     8281 acgtcgaaac cctgcttgcc gcctaccgct tcctgcgcga tgtcgaacac cgcctgcaat
     8341 actgggacga ccggcaaacc caaaccctgc cgatctcgcc cgaacagcgg caactgctcg
     8401 ccgaaagcat gggtttcgac agttatgccg ctttttcaga cggcctcaat gttcatcgga
     8461 acaaagtcaa tcagttgttc aacgaaattt tgagcgaacc tgaagaacaa gcgcaaagca
     8521 atagcgaatg gcaatgggca tggcaggaaa aacccgacga agaagaacgg ctaggccgtc
     8581 tgaaagaaca cgggttcgat gccgaagccg tcaccgcaag gctcgaacaa atctgccacg
     8641 gacataaata ccgccgcctt tccgcacacg cccagccgcg ctttgacacc attgtgccgc
     8701 tgttcgtaca ggcggcggca gagcaaaaca acccgacaga tacgctgatg cggctgttgg
     8761 attttctcga aaacatcagc ctccgctccg cctatctcgc cttcctcaac gaacatccgc
     8821 aaaccttggc acaactggcg cagattatga gccaaagctc gtgggtggcg gcgtatctga
     8881 acaaatatcc gattttgttg gacgaactca tcagcgcgca gcttttggat accgcgtttg
     8941 attggcaggc actcgccgcc gccctttcag acggcatcga agcctgcggc ggcgataccg
     9001 aagcgcaaat ggacacgctg cgccatttcc aacacgccca agtcttccgc ctcgccgtcc
     9061 aagacctcgc cggattgtgg acggtagaat ccctctctga ccaactctcc gccctcgccg
     9121 acaccgtcat tgccgccgcc ctttcgtgcg cgtgggcgga tatgcccaaa aaacaccgcg
     9181 acaccccgca attcgccgtc atcggctacg gcaagctcgg cggcaaagaa ctcggctacg
     9241 cctccgacct cgacttagtc tatctttacg acgatcccca tcccgaagca ggcgacgtgt
     9301 acagccgcct cgcccgccgc ctgaccaacc ggctttccgc cgccaccggc gcgggcagcc
     9361 tctacgaaac cgacctgcgc ctgcgcccta atggcgacgc cggtttcctc gcgcacagca
     9421 tcgccgcctt tggaaaatac cagcgtgaaa acgcatggac atgggaacac cagtccctca
     9481 cccgcgcccg cttcatctgc ggcacacccg aaattcagac ggcattcgac cgcatccgca
     9541 ccgaaatgct gactgccgaa cgcgaccaaa ccgccttggc aggcgaaatc atcgaaatgc
     9601 gcgaaaaaat gttccccacc catccgcctg ccgacagcaa cgtcaaatac gcgcgcggcg
     9661 gcgtggtcga cgtcgaattt atcgtccaat atctgatact tgcccatgcc cgccagtatc
     9721 cgcaactctt ggacaactac ggcaacatcg ccctattgaa catcgccgcc gactgcggtt
     9781 tgattgacaa aaccctcgcc ggacaaagcc gcaccgccta ccgcctctac cgccggcagc
     9841 agcacaacac caaattgcgc gacgcggcaa aaaccgaagt aagcgacgaa ttgctgtccc
     9901 attacggcaa tgtcaggaaa ttgtggcggg aagtgttcgg ggaggaagcg gcaaccgcct
     9961 gaacaaaaaa tgccgtctga agcctgacaa tccgggtttc agacggcatt tgtttttggc
    10021 tgtgtctgaa caatcggtac gatttcggtt gtttgcaaat tgaaaggcgg ttattcctat
    10081 gttcaggcgg caaaccgaaa tattttcccc aaccgatagg gcgatatcaa agcctattcg
    10141 aataccgcct ttacggggaa ggggctttcc gagcttgacc atggtcaggc tcggcaaatc
    10201 agcccgcatc ctgtcgatgc gtccgtccaa atcggtttgg aacgccgcaa tgtgatatcc
    10261 gcctatcaag gttttgcgtg cgtgtgtcgg cgagggcttt gccaaaaccg aaatcaaaat
    10321 caagttgtca ggcatccttc cgtttctatt aaaatagcgc attccatttt tcagacggca
    10381 tccttatgtt tcccgaccaa tccgccccca atctgctgca aggcttgaac cccgaacaac
    10441 tctccgccgt aacctggccg ccgcaatccg ccctcgtttt ggcaggcgca ggcagcggca
    10501 aaacgcgcgt gctgaccacg cgtatcgcat ggcttttgca aagcggacaa gccagcgtac
    10561 acagcattat ggcggtaacg tttaccaaca aggccgccaa agagatgcaa acccgactcg
    10621 gcgcaatgat tcccatcaac gtccgcgcta tgtggctcgg cacgttccac ggtttgtgcc
    10681 accgcttttt gcgcctgcac caccgcgacg caggcctgcc gtcttccttt caaatcctcg
    10741 acagcggcga ccagctttcc ctcatcaaac gcctgctcaa aagcctcaac atcgccgaag
    10801 aaatcatcgc gccgcgttcg ctgcaaggct ttatcaacgc gcaaaaagaa tccggtttgc
    10861 gcgcttccgt cttgggcgcg cccgatccgc acacaagccg catgattggg tgctacgccg
    10921 aatacgacaa aatctgccaa cgcgaaggcg tggtcgattt cgccgaactc atgctccgca
    10981 gctacgaaat gctgcaaagt aacgaaatcc tgcgccggca ctaccaaaac cgcttcaacc
    11041 acattctggt cgacgagttt caagacacca acaaactgca atacgcctgg ctcaaactca
    11101 tggcgggcgg taacgcagcg gtatttgccg tcggcgacga cgaccaaagc atttaccgct
    11161 tccgcggcgc aaacgtcggc aacatgaccg cactgatgga agaattccac atcgacgcgc
    11221 ccgtcaaact cgaacaaaac taccgctccg tcggcaacat cctcgccgcc gccaacgccg
    11281 ttatcgaaaa caacgacgaa cgtctcggca aaaacctgcg caccgacgcc gaagcaggcg
    11341 acaaaatccg ctattactcc gcctttaccg acctcgaaga agcccggttc atcgtggacg
    11401 aaaccaaagc cctcgaacgc gaaggctggg atttggacga aatcgccgtc ctctaccgca
    11461 gcaacgccca atcgcgcgtc atcgaacaaa gcctgttccg cagcggcatc ccctacaaaa
    11521 tctacggcgg cctgcgcttt tacgaacgcc aagaaatcaa acacgccctc gcctacctgc
    11581 gcctcgccgt caatcccgac gacgacaacg ccctcttgcg tgtcatcaac ttcccaccgc
    11641 gcggcatcgg cgcgcgcacc gtcgaaaacc ttcagacggc ctcaaacgaa caaggcatca
    11701 ccctctggca ggcagcctgc aacgccggcg cgaaagccgc caaagtcgtc gccttcgtcc
    11761 gcctgattga agccctgcgc aaccaagtcg gacaaatgca cctgtccgaa atcatcgtcg
    11821 gcatcctcaa agacagcggt ctgaccgagc actaccgaac ccaaaaaggc gacaaccaag
    11881 accgcctcga caaccttgac gaactcgtca acgccgccat cgagttcaaa cccgaagaca
    11941 gcaactttga aaccctgccc gaaaacattt cagacgatcc cgccttcccc atcctcgcct
    12001 tcttgagcaa cgccgccctc gaatccggcg aaaaccaagc aggggcaggc gaaaaagccg
    12061 tccaactgat gaccgtccac gccgccaaag gcttggaatt caacgccgtc ttcctcaccg
    12121 gtatggaaga ggggcgtttc cccagcgaaa tgagccttgc cgagcgcggc ggcctcgaag
    12181 aagaacgccg cctcatgtac gtcgccatca cccgcgcccg caaacgcctc tacatcacca
    12241 tggcacagca acgcatgctg cacggacaaa cccaattcgg catcgcatcc cgcttcgtcg
    12301 aagaaatccc gccagaagta ttgcactacc tgtccgtcaa aaaacccgcc ttcgacagct
    12361 acggcaacac gcgccaaacc accgtacaac gggacaaaat catcgatgac ttcaaacagc
    12421 cgcaaaccta cgcaggcttc cgcatcggac aaaacgtccg tcacgccaaa ttcggcaccg
    12481 gcgtgattat cgatgccgca gacaaaggcg aatccgcccg actgaccatc aacttcggca
    12541 aacagggcgt gaaagagctg gataccaagt ttgcgaaatt ggaagcgatg taaatttgaa
    12601 atgcaggccg gatattcgta tccgacaaaa aaacatttga cgcgtttatc gtttccgaaa
    12661 aaccgctgtt ggaaatgtcg gattcgagaa tccgacctac ggcaaaaaac cgtagcaagg
    12721 acaaggcaaa tagtcgtctg aaaacgggaa gggcaatttt gccgcagccg ccgccgtcat
    12781 tcccgcgaac ctacattccg tcattcccac gaaagtggga atccggaacg caaaatctaa
    12841 agaaaccgtt ttatccgata agtttccgca ccgacaaaac cagattcccg cctgcgcggg
    12901 aatgacggcg gcgggaatcg gcggattcgg cggagttggt ggatttggcg ggctgaagcc
    12961 cgcccttgta tatcggaact tccgtatcat agcgacaaac cgcccggccg ccacccgcgc
    13021 ccgcccaagg cagacaaccg ttgcgcggct cagggagcgg cagggcaacc catcggcaca
    13081 gccggacagt tgccaactgt atatggctgc cgcggcagcg acacgttttg aaccgcttat
    13141 tcgggatttc caccaacgcc tgctgtatag cggattaaca aaaaccggta cggcgttgcc
    13201 ccgccccggc tcaaagggaa cgattcccta aggtgatgaa gcaccaggcg gatcggttcc
    13261 gtaccattcg tactgcctgc ggcccgccgc cttgtcccga tttttgttaa tccgccatac
    13321 aagggtaagc cgtataaggt tgccgttacg gcatgtatgc gcaaactgcc gacgatatcg
    13381 aatgcccgga tgcgtgatta ttttgccgca aacgataccg ccgaaaacgg tattcggacg
    13441 gcttgatttg agttttggta tttttgcccg acggggtgga aaatacagtt gctacggctc
    13501 gatgaatcgt cagaaatacc cgaaccgtca ttcccgcgca ggcgggaatc taggtctgtc
    13561 ggtgcggaaa tttatcgggt aaaacggttt cttgagattt tt
//
LOCUS       DAXFZM010000064        13529 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.064, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000064 DAXFZM010000000
VERSION     DAXFZM010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13529)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13529)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13529
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.064"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(174..383)
                     /locus_tag="ACFJAG_001533"
     CDS             complement(174..383)
                     /locus_tag="ACFJAG_001533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraR/DksA family transcriptional regulator"
                     /protein_id="HFC3980789.1"
                     /translation="MTDFADRASEREAEFLVEALAKHQPPSENTAGFSHCEDCGDPIP
                     EAKRKAVRGCTRCVVCHEYIQLKTK"
     gene            complement(376..597)
                     /locus_tag="ACFJAG_001534"
     CDS             complement(376..597)
                     /locus_tag="ACFJAG_001534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980790.1"
                     /translation="MPSDTPIKTVAVAEIPPVPSGLLVEYERPERPAGGSPEQLLNHA
                     VRYGGYYRKLEIQIEGWQNWHTKGRLKHD"
     gene            complement(671..958)
                     /locus_tag="ACFJAG_001535"
     CDS             complement(671..958)
                     /locus_tag="ACFJAG_001535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980791.1"
                     /translation="MIEFVRAKKRLLWAFVLLLAWACGYRYAADKAEAEQTALIAAYR
                     HSSMVAAEQYALQLKKAQDERQRWYDFSQKQSTDLAAALSELDKTRNTLQE"
     gene            complement(1078..1716)
                     /locus_tag="ACFJAG_001536"
     CDS             complement(1078..1716)
                     /locus_tag="ACFJAG_001536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980792.1"
                     /translation="MTIQSKHYEIRPKQAFITPENVSIPADLCCEVQVRSLLQHAYAE
                     LVHDNIYKPDGNVPKQAECEVAKSMALMETTDDLFSRTLAILKEANQPQEELLPQLSQ
                     LYQKEIGLVPEVDKKTNMIFLETFQSSISQSSILSDIRSLLNEKKYIAKRIKENAEEM
                     YFFSQPAALLVYWLIEKVGADEVWKKWPLPAYNKNLKFICTDLDKQPSHELF"
     gene            complement(1713..2087)
                     /locus_tag="ACFJAG_001537"
     CDS             complement(1713..2087)
                     /locus_tag="ACFJAG_001537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980793.1"
                     /translation="MSDIDDFKSYLESHQAAFSAWGRFVAEEIQNQLSNVISPVPVAN
                     FLKIEAKPGVKEISSALAKIGRKNYTSPQTQMTDLVGVRFVALLAEHIQIVCEIIESS
                     SQWNAKVSKDFADEIQQNPKAI"
     gene            complement(2084..3124)
                     /locus_tag="ACFJAG_001538"
     CDS             complement(2084..3124)
                     /locus_tag="ACFJAG_001538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009295 - nucleoid [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoid-associated protein"
                     /protein_id="HFC3980794.1"
                     /translation="MKKIITHRIYPKNENRERVESKISTHLIDLPITARRTLETRLTK
                     ALGNKSHGIEMSVVNTAENSFFQIAAAIQLKEEAEFIEDSAQFAHMLTDAQLNTNAPG
                     GILLVLKGRVGDTGKPFLCVIKAEPQDGFRTKEEDDFITIEFLEELLLTDSARLFKIG
                     FLVAETVRPLEQIQSGNYRAFLYDHLMTQTETRPAASYFYQVFLGMSIAASSRKLTQD
                     FFEWTRNFIDNSDLSDDAKLDAHEALRVTLKSAEATISVNNFAQNHLPQEKRTTYTEF
                     MVEKDFPQNAVSKDIEYIKTRLRKRRSYGFSNGVVILTPPEHTQDYMEIAPTEDGEYT
                     VVLIKGQLQQQK"
     gene            complement(3358..3738)
                     /locus_tag="ACFJAG_001539"
     CDS             complement(3358..3738)
                     /locus_tag="ACFJAG_001539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HFC3980795.1"
                     /translation="MEKTSLFGKRLKEERIKLGLNQAEAAEKCGFSREMWGKWERGEN
                     RPSSEKLFSFSKIGIDIGYVMHGRRGETAAMPSESLSAEEKELLALFRQLGSGSRKEL
                     ADYAAFKLVVEKKAQTALGKVSNG"
     gene            4010..4240
                     /locus_tag="ACFJAG_001540"
     CDS             4010..4240
                     /locus_tag="ACFJAG_001540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HFC3980796.1"
                     /translation="MEKPLNFKPIPYLQTRGSTAVWFKRNGVCKTHRAKHFNLERTAV
                     EHPLRGKLKGNFGKSHEAAVKLGLKEDADGDE"
     gene            4227..4511
                     /locus_tag="ACFJAG_001541"
     CDS             4227..4511
                     /locus_tag="ACFJAG_001541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HFC3980797.1"
                     /translation="MATSKKAQRLLRVFLAMDAHPVIGISNKELSDGLGLTPSQVSRD
                     IDDLVASGLVIKLENGNYAYGIKTLQIAERFRKQQERLNARLQELENRIY"
     gene            4548..4730
                     /locus_tag="ACFJAG_001542"
     CDS             4548..4730
                     /locus_tag="ACFJAG_001542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980798.1"
                     /translation="MATEILGHTVGVTANELAIHSMEVMDKFSGGEAYNETVWIERGR
                     FADAKRWKGCLSRDAR"
     gene            5422..7188
                     /locus_tag="ACFJAG_001543"
     CDS             5422..7188
                     /locus_tag="ACFJAG_001543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HFC3980799.1"
                     /translation="MIERLKAVENQAEAMGRGARSAYLKQQAQELGISLATLYRKLEA
                     VSVKPTRKRRSDAGKTELKPEEAKLISTVLAEAMRRNGKRLMPVRQAVEMLRANGKIE
                     AARIDGETGEVIPLSENTITRALREYKLHSDQLLQPDPVSRMKSEHPNHCWQIDPSLC
                     VLYCLPRQGKDTGLRVMKEEEFYKNKPKNVVKIENDRVWRYTGTDHASGTISVRYYFG
                     GETSANLCDFFIYMMQAKKDIGKDPFRTVPRMVMLDPGSANTSAAFKNLCKPLDVHVQ
                     INKPGNPRAKGQVEKANDIVETAFESGLRFTEVHDIDQLNALSERWMRYYNGTQKHSR
                     HGMTRYQAWNKIKPEQLILPPPAEYCRELAVSAPKEAKVSADLEIRFGGRVYSVKGIK
                     GILVGQKVLVGKNPWEANGARVATYDAEGNEVWVSVPEVVFDEMGFKADAAVIGAEYK
                     APADTDAQRHRKELDKLAMGAETLEAAAAKRKGKAVPFGGKIDPYKHQEDTLAASNTL
                     FMPKQGQQMDYNKMEVAEQVLSKVEIAKRLKPRVEADGGDWKQAVSVILKHYPEGVTE
                     GRLEEAFERTRTRCRLKLLKTG"
     gene            complement(7229..7417)
                     /locus_tag="ACFJAG_001544"
     CDS             complement(7229..7417)
                     /locus_tag="ACFJAG_001544"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980800.1"
                     /translation="MPSEFFQTAFLPTRFACRVGLPVRPEASDKQGGFYSGLNLNRYG
                     VASPCRTICTVCGFAALS"
     gene            complement(7527..8914)
                     /locus_tag="ACFJAG_001545"
                     /pseudo
     CDS             complement(7527..8914)
                     /locus_tag="ACFJAG_001545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238907.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PolC-type DNA polymerase III"
     gene            9032..9108
                     /locus_tag="ACFJAG_001546"
     tRNA            9032..9108
                     /locus_tag="ACFJAG_001546"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9066..9068,aa:Arg,seq:acg)
     gene            9126..9200
                     /locus_tag="ACFJAG_001547"
     tRNA            9126..9200
                     /locus_tag="ACFJAG_001547"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9159..9161,aa:Glu,seq:ttc)
     gene            9363..9479
                     /locus_tag="ACFJAG_001548"
                     /pseudo
     CDS             9363..9479
                     /locus_tag="ACFJAG_001548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            9637..10812
                     /locus_tag="ACFJAG_001549"
     CDS             9637..10812
                     /locus_tag="ACFJAG_001549"
                     /EC_number="1.13.12.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent flavin oxidoreductase"
                     /protein_id="HFC3980801.1"
                     /translation="MQNIFDPLIIRGKSLIPIVQGGMGVGVSASGLSSAVARENGIGT
                     IASVDLRHLHEDLLAESQINPSEEKYTSLNCTALDREIQKAKSASEGKGLIAVNVMKA
                     VKDHAAYVRQACESGADAVVMGAGLPLDLPEMTEGYHKDVALLPILSESRGINIVLKR
                     WMKKGILPDAIVVEHPAHAAGHLGASTVEGVNDAKFDFKRVIEETFEVFKNLGLEGEK
                     IPLILAGGMANFEKVKTALKNWGASAVQIGTAFAVTEEGDAHLNFKKTLASAETEKVV
                     EFMSVAGLPARGIRTKFLDSYIRREGKLQANAKADPRRCTQGLNCLTSCGLRDGLSKA
                     GQFCIDIQLAAAFRGEVDKGLFFRGKDQLPFGNAIRTVRETIQYLLTGSEPVATLGR"
     gene            complement(11154..11702)
                     /locus_tag="ACFJAG_001550"
     CDS             complement(11154..11702)
                     /locus_tag="ACFJAG_001550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FixH family protein"
                     /protein_id="HFC3980802.1"
                     /translation="MSQNNPIKPWYKHVWPWVLMAGPIFVVIASVAMFFVAQQHATDL
                     VTDDYYKDGKHIDIQLHRDEEAVRRHIGVQVLISPDMNAAKVFVGGEFDGKQPLNLLL
                     MHPTRKADDQTVALKPVGSAQNGRAEYEAVFKTLPPANHWYVRVEDAAGVWRVENKWI
                     TSQGNAVDLTPMDKLFNNAGSK"
     gene            complement(11705..13201)
                     /gene="ccoG"
                     /locus_tag="ACFJAG_001551"
     CDS             complement(11705..13201)
                     /gene="ccoG"
                     /locus_tag="ACFJAG_001551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003708970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0008535 - respiratory chain complex IV
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase accessory protein CcoG"
                     /protein_id="HFC3980803.1"
                     /translation="MTTENQAGSPASGIGTSEQTKAAPKVKKTFDPRASVIQIHPEGE
                     RIHPKKAEGRFAKLRIAAVLATQFVFYVIPWFNWSGRQAVVFNIPERHFFIFGLSLGV
                     GDLIYLALLLMICAFGLFWWTTIAGRLWCGYSCPQTVYTEIMLWIDNLVEGDRNKRLK
                     LEKSPWNFTKIRIKATKYLLIFLVCAWTGITFAGWFVPIRQFVPDLFTGAAGGGAMFA
                     AAFYGFMTFFFAHIMREKVCLHMCPYARFQSAMFDKDTLIVSYDAERGEPRGARKKTV
                     NKEEAGLGDCINCAMCVQVCPVGIDIRNGLQYQCIGCAACIDACDEIMDKMGYPSGLI
                     RYTTESALEHEYAEKDIKKRLLRPRVAGYGAVLAVVVAAFLVGLSTRKMVEVDILKDR
                     GVMVRENAKGWLENAYSLRIINNSEKEQLITASVKGFDEIALTGLPEGGIKVAPRETI
                     TLPVQVSTIPEYADKGSHPIEFIFQYRESGASDGKPVVLEEDATFIGE"
BASE COUNT         3564 a         3388 c         3268 g         3309 t
ORIGIN      
        1 aagaggacga ttccctaagg tgatggagcg ccgggcggat cggttccgta ccattcgtac
       61 tgcctgcggc ccgccgcctt gtcctgattt ttgttaatcc gctatggttt aaagctttgt
      121 ttcttaagtc cgcagagtat gccatggtta aaccttcaac gtcgagtgtt gtactatttt
      181 gtttttaatt gaatatattc gtggcagaca acacagcgcg tacagcctcg gacggctttt
      241 cgctttgctt ccggtatcgg gtcgccgcag tcttcgcaat ggctgaagcc ggcggtgttt
      301 tcagacggcg gttggtgttt cgccaaggct tccaccagaa attcggcttc gcgttcggat
      361 gcgcggtcgg caaaatcagt catgtttcag acggcctttc gtgtgccagt tctgccagcc
      421 ctcaatttgg atttcgagct ttcggtagta tccgccatag cggacggcgt ggtttaaaag
      481 ttgttcggga gagccgccgg ccggacgctc ggggcgttcg tattcgacca gcagtccgga
      541 aggaacgggc ggaatttccg cgacggcaac ggttttaatc ggggtatccg aaggcacggt
      601 tgtagaggtg caggctgttc gtgccaaggc cgttaaaacg gttgccgtct ttgtctgccg
      661 cttcacgggt ttactcctgt aaggtgttgc gcgttttgtc caattcgctc agggcggccg
      721 ccaaatccgt gctttgtttt tgggaaaagt cgtaccaccg ctgcctttcg tcctgcgctt
      781 ttttaagctg caaggcgtat tgttccgccg caaccataga agaatgccga taggcggcaa
      841 tcagggcggt ttgttccgct tcggccttgt cggcagcgta ccggtagccg cacgcccacg
      901 caagcaaaag tacaaatgcc caaagcagcc gttttttggc tcggacaaat tcaatcattg
      961 ccgccccctt cctgatttgc ggattttttg atttccgcca gctgcggaac tgccgctatg
     1021 ccgcgtttga ttaaggcata attaggaaag gccgtctgaa tgggctttta aagggggtta
     1081 aaagagttca tgggatggtt gcttatccaa atcagtacaa atgaatttca ggtttttgtt
     1141 gtatgcaggc aaaggccatt ttttccatac ttcatctgca ccaactttct caatcagcca
     1201 atagaccaac aaagctgctg gctgactgaa aaaatacatt tcttcagcat tttcttttat
     1261 ccgcttggca atatatttct tctcattcaa aagtgaacgg atgtcagaaa gaatacttga
     1321 ttgggaaatg ctggattgaa atgtttctag aaaaatcata ttggtttttt tatcaacttc
     1381 aggaacaagc cctatttcct tttgataaag ctgtgataat tggggaagaa gctcttcttg
     1441 tggttgattt gcttctttca aaattgccag agtacgacta aataagtcat ctgtagtttc
     1501 catcaaagcc atgctcttcg cgacttcgca ctctgcttgc tttggaacat tgccgtcagg
     1561 cttgtatata ttgtcatgaa ccagctctgc ataagcatgt tggagtaaag aacgcacctg
     1621 aacttcacag cacaaatcag cagggatgct gacattttcg ggtgtaatga atgcttgttt
     1681 aggacgaatc tcgtaatgtt tggattgtat agtcaaattg ctttgggatt ttgctgaatt
     1741 tcatctgcaa aatctttcga aactttagca ttccactgag atgaggattc aatgatttca
     1801 caaactattt gaatatgttc cgcaagcaat gccacaaaac gtacgccgac caagtcagtc
     1861 atttgagttt gaggtgaagt gtaatttttt cggccaatct tggctagagc tgaagaaatc
     1921 tctttgactc caggctttgc ttcaattttt agaaaattgg caaccggaac aggagaaatg
     1981 acattggata attgattttg aatttcttca gccacaaatc taccccaagc ggaaaatgcc
     2041 gcttggtggc tttctaaata gcttttgaaa tcatcaatat cactcatttt tgttgttgta
     2101 actgtccttt aattaggaca acagtatatt ccccatcttc cgttggcgca atttccatat
     2161 agtcctgagt atgctcggga ggagtcaaga taactacacc gttactaaat ccgtaagacc
     2221 tccgtttgcg taaacgagtt ttaatatatt caatatcttt acttacggca ttttgaggaa
     2281 aatccttttc caccataaat tctgtataag ttgttcgttt ttcttgaggt aaatgatttt
     2341 gggcaaaatt atttacacta atggttgctt ccgcactttt caatgtaacg cgcaatgctt
     2401 catgcgcatc taattttgca tcatcactta aatcagagtt atcgataaaa ttgcgtgtcc
     2461 actcaaaaaa atcctgcgtc aatttacggg aagaagcagc tatactcata cccaagaata
     2521 cttgatagaa ataggaagct gccggtctag tttccgtttg tgtcatcaga tggtcataca
     2581 aaaaagctcg ataattccca gattgtattt gctctagcgg ccttactgtt tcagccacca
     2641 aaaaacctat cttgaataat cttgctgaat cggtcagtaa taattcttct aagaattcaa
     2701 tcgtgataaa gtcatcctct tctttggttc ggaacccatc ttgaggttca gccttaatta
     2761 cacataaaaa cggcttaccg gtatctccaa ccctaccttt taaaaccaac aaaataccac
     2821 ccggtgcatt tgtattcagt tgtgcatcgg tcaacatgtg ggcaaattgt gcggaatcct
     2881 caataaactc tgcttcctct ttgagttgta tggctgccgc tatctgaaaa aaactatttt
     2941 cagccgtatt gacaacagac atttcaatgc catgagattt attacccaaa gctttggtca
     3001 gcctggtttc caatgttctt cttgccgtaa taggcaaatc aatcaaatgt gtactgattt
     3061 tagattctac acgctctcta ttttcatttt tcggataaat acgatgggta ataatttttt
     3121 tcaattacca gcccttcaaa agagcaattc gtttctgtca tcatttttcc tattgtaagt
     3181 taattaaggt cttttgaaat ctgaaccact tggccgatga cctgaatatc ggggtggttt
     3241 ttaatacgct ttaaaatgca cggccgctcc tattgcttaa tatctgtttc agaacaccgg
     3301 agcagcccga ctgtcagagt gtcccaaatg ccgtctgaaa tcttcagacg gcatttttta
     3361 tccgttgctc actttaccaa gcgcagtttg ggcttttttc tctaccacca gcttaaaggc
     3421 ggcgtagtca gcaagctctt tgcggctgcc gctgccgagc tgacggaaca gggcaagcag
     3481 ttctttttct tcagcactca aggattcaga cggcatggcg gctgtttcgc cgcgtctgcc
     3541 gtgcatgacg taaccaatat cgatgccgat tttagaaaaa gagaataatt tttcacttga
     3601 tgggcgattt tcaccacgct cccactttcc ccacatctca cgagaaaaac cacatttttc
     3661 agcagcttct gcttggttca agcctaattt aattctttct tctttcaatc gcttaccaaa
     3721 aagagaagtt ttttccactt aaatttcctt gaaaagagaa atatttttct cataattcac
     3781 acatcaagac atgaaacacc ctaaatcatc acgaaaaagg acgaaaaaat gaacactttg
     3841 aaggctcatg cgcgacagct catgatggat cacatacacc cggctacggg aaaaagcttg
     3901 tttattttaa aacaagccaa gaccctgctg ctgcacaaca gaccggatgt ttatcgtgca
     3961 aagaggccta aaactaaaca cattatacca cacgaaaggc ataaataata ttgaaaaacc
     4021 tttaaatttc aagcctattc cctatctgca aacgcgcggc agcacggccg tgtggtttaa
     4081 gcgcaacggc gtgtgcaaga cgcaccgggc gaaacatttc aatttggagc gcaccgcggt
     4141 ggaacacccc ttgcgcggca agctgaaagg caatttcggc aaaagccacg aagcggcggt
     4201 aaaacttggg ctgaaggagg atgcggatgg cgacgagtaa aaaggcgcag cggctgttgc
     4261 gggtgttttt ggcgatggac gcgcatccgg taatcggcat cagcaataag gagctttcag
     4321 acggcctggg gctgacgcca tcacaagtca gcagggatat tgatgatttg gttgcatcgg
     4381 gattggtcat caagcttgaa aacggcaact acgcctacgg catcaaaacc ctacaaatcg
     4441 cagagcggtt cagaaaacag caagagcggc tgaatgcgcg cttgcaagaa ttggaaaacc
     4501 gaatttacta aatgcgacga cgtcgtcgca tttgaggagc aaaagaaatg gcaacagaaa
     4561 ttttaggaca tacggtcggc gtaacggcaa acgaattggc tatccacagt atggaggtta
     4621 tggacaagtt ttcaggcggc gaggcctaca acgagacggt atggattgag cgcggacgat
     4681 ttgcggacgc caaacgatgg aagggatgtt tgagccggga cgcgcgctga tcatcatcaa
     4741 agagcatacg ccgcatgggc ggtttgccga aatcgctgaa aaagagttgg cctcggacgg
     4801 cgggaatccc aaagactgat gaatgccacc ctccgtttta tcgacccgaa aatgaaacaa
     4861 gcgcagccta agctgatgac gttgggcaaa tccaaactgc tcgagctgct ggtcgaagac
     4921 gacgacactt tgttggagct tgccgaaggc ggtgaggtca acggcaacac ttttgacgat
     4981 gtcgaccgta tgactattaa ggagctgcgc gtcgccctgc gcgaaagccg tgaaacggcg
     5041 gaagcgaaag ataaggtgat tgccgataaa aataaaaagg tcgatgagct ggcggaaaag
     5101 ctgtcgaaaa agcagacggg tgtcaaagag cctaaacctg cggatgtggg catcgagctg
     5161 acgatgcagc ttggcagctt gacagcttgg aagtcggtat ccgctcgcaa atcagccgat
     5221 tgcgcgatat gttcgagcag atggcggcgc acggcgaggc gcatggattt gaccaccgcg
     5281 cgaagatggt cggcacgctc aatcaaatta ttttggactg cgagcaactg cgcgaaagct
     5341 atgccctacc gaccgaagca ccggcagaca atgtgccgga atggttgggc ggtgaaacgg
     5401 gagaaggcga tgaatccggc aatgattgag cgtcttaaag cagtcgaaaa tcaggcggaa
     5461 gcaatggggc gcggcgcacg ctctgcatat cttaagcagc aggcgcagga attgggcatc
     5521 agccttgcca cgctataccg caagctggag gcggtcagcg tcaagccgac gcgcaaacgg
     5581 cgcagcgatg cgggcaagac ggagcttaaa ccggaagaag ccaaattgat ttcgacggtt
     5641 ttggcggagg cgatgaggcg caacggcaag cggttgatgc cggtgcggca ggcggtggaa
     5701 atgctgcgcg ccaacgggaa aatcgaggcg gcgcggattg acggggaaac cggggaagtc
     5761 atcccccttt ctgaaaacac cattacccgg gctttacggg aatacaagct gcattccgac
     5821 cagcttttgc agcccgaccc cgtcagccgc atgaaatcgg aacacccgaa ccattgttgg
     5881 caaatcgacc cgagtttgtg cgttttgtat tgcctgccgc gtcagggcaa ggatacgggg
     5941 ctgcgggtga tgaaggaaga ggagttttat aaaaacaagc cgaaaaacgt cgtcaaaatc
     6001 gaaaacgacc gcgtttggcg gtacacgggg acagaccatg cctccggcac gatttcggtg
     6061 cgttattact tcggcggcga aaccagcgcg aacctctgtg attttttcat ctacatgatg
     6121 caggcgaaaa aagacatcgg caaagacccg ttccggaccg taccgcgcat ggtcatgctt
     6181 gacccgggca gcgcgaatac ttcggcggcg tttaaaaatt tgtgcaagcc cttggatgtg
     6241 catgtgcaaa tcaacaagcc gggcaatccg cgtgccaaag ggcaagtgga aaaagccaac
     6301 gatattgtgg aaacggcatt tgagagcggg ttgcgcttta ccgaggtaca cgacatcgac
     6361 cagctcaatg ctttatcgga acgctggatg cgttactaca acggtacgca aaaacacagc
     6421 cgccacggca tgacccgcta tcaggcgtgg aacaaaatca aacccgagca gctcatcctg
     6481 ccgccgcctg ccgaatattg ccgagagctt gccgtcagcg cgccgaaaga ggcgaaagtc
     6541 tcggcggatt tggaaatccg ctttggcgga cgggtatata gcgtaaaagg catcaagggg
     6601 attttggtcg gtcagaaagt tttggtcggt aagaatcctt gggaggcaaa cggggcgcgg
     6661 gtcgccactt atgacgcgga gggtaacgag gtttgggtat ccgtacccga agtagttttt
     6721 gacgagatgg gcttcaaggc tgatgccgcg gtcatcgggg cggaatacaa agccccggcc
     6781 gatacagacg cgcaacggca tcgcaaagag ctggacaagc tggcgatggg tgcggaaacg
     6841 ctggaggcgg cagccgccaa acgcaaaggc aaggcagtcc cgttcggcgg caaaatcgac
     6901 ccgtacaaac atcaagaaga tacgcttgcc gcaagcaata cgctctttat gcccaaacag
     6961 gggcaacaga tggattacaa caagatggag gtcgccgagc aggtattgag caaggtcgaa
     7021 atcgccaaac gcttaaaacc ccgcgtcgag gcagacggcg gcgactggaa acaggcagtg
     7081 tcggtcatcc tcaaacacta cccggaaggt gtgaccgagg gcaggctgga agaggcgttt
     7141 gaacgcaccc ggacaagatg ccgtctgaaa cttttgaaaa ccggttaggt ttcaaccgaa
     7201 aacagctttt atagtggatt aacaaaaatc aggacaaggc ggcgaagccg cagacagtac
     7261 aaatagtacg gcaaggcgag gcaacgccgt accggtttaa atttaatcca ctataaaaac
     7321 caccctgctt gtccgatgcc tcgggacgga cgggcaaacc gacacggcac gcaaaccgcg
     7381 tcggcaaaaa tgccgtctga aaaaattcag acggcatctt cagacacatt acctgcaaac
     7441 ggcaacacat tccaatccag accgatcagg caatcaatac gaacggctgt ttacatactt
     7501 accagctttc accaaccggt atcgatttaa ccgatttcct taatattttt cctgtccgtt
     7561 ttaaacttcg ccttaaacac atccggtaaa tctttatcga aataccaaag cccgtcatcc
     7621 atttccaatg cgccgcccat tccatgcaga acgacttttc ccccgttaaa ggatcggttt
     7681 cggtaatttc cacctcatgc atttttcccc aatccaaaac aggcaacttg tgtgcaaacg
     7741 ccaaaacttg ttcgtcagaa cggccgcacg ccttatcgca tcggcctgaa acatatacgg
     7801 gacaaggctc atcctctgca taaccgtccg gaaggatacc ggctgaggca ggacacaatc
     7861 cgtatgtttc cgcccacgac gacaaagccc gtctcgccgc ctttttattg gcaaataatc
     7921 cggtaggcgg attatccgtc acaccgtttt tcaaagccgc tgttttcgca ttcaacatgc
     7981 cgtctgaacc tttttcaaac ctgacggtcg taaatgtttt aagcagattt ttggcagata
     8041 cataacaacc cgaatgataa cgtccgacca attccgcttt aatcttatat gcatgcaggc
     8101 tgcccaatgc gggaaaaaaa aacggacttc ctccgtattg caccaatcaa acgggggctt
     8161 ttccggaatc caacaaagcc gcaacctcgc catatgcccg ttcaaacgta ccgatataat
     8221 ttacttttcc cccgccgtcg aaacaggcaa gcacacctgt accgtcgggc aaaccgtaca
     8281 gccgttccct caaccgttcg ggaagcgcgg caggaagaag tttcggattc gtcaaacgga
     8341 aacactgcct gctccactcc tcaagcccgt gtgccgacag gctgtattcc aaataatcac
     8401 acaacgccga tacatccgcc atcgcacgat gcctgtcttc cacaacaatc cccaaccttt
     8461 cgatgatacc gtccaggctg tgcttgtaaa actgcggata cagccgacgc gaaagctgca
     8521 cactgcacaa agcaggcgat gaaaatccga tacccgcacg atgaaactca tgctttaaaa
     8581 acgtatagtc gaaacggctg ttgtgcgcca ccagcacgca ccccttcaat accgaaaaca
     8641 acccgccggc aatttcagca aacaccggcg cgtcggcaac catgccgtct gaaatccccg
     8701 tcagttccgc cacaaacttc ggaatcggtt tttgaggatt gaccagccat tcatacctct
     8761 ccgcccttcc ctgcccaaac ttgaccaaag ccacttcggt taccctgtct tcatacagat
     8821 tgccgcccgt cgattccaaa tcaaccacgg caacaggcat tccaaaccgt aaaaacgcct
     8881 tttccagcaa gggccagcgg gaaacaacaa tcattttatt ctctttaaat tcaaacaaca
     8941 aaccgatatt ttacactttt aaggcatttc atccaacaaa ataattgaca gaatccgatg
     9001 attaccataa aattcaaaaa tttattgcag cgcacccgta gctcagttgg atagagtatc
     9061 tggctacgaa ccagagggtc gggcgttcga atcgctccgg gtgcgccagt aagaaaatac
     9121 aatacgcgcc catcgtctag cggttaggac atcgcccttt cacggcggta accggggttc
     9181 gattccccgt gggcgtgcca gattccaaat ccccgaaata atccctcggg gatttttatt
     9241 gcctcggcaa ttcgttacca tatctttacc tacccacttc atcagaatct cagacgtaat
     9301 cgaatcatat tcaaactttt gccatgcaaa ccgatatccc gtaaccggat gcggtgtccg
     9361 ttcaatatag tggattaaat ttaaatcagg acaatgcgac gaagccccag acagtacaaa
     9421 tagtacggca aggcgaggca acgccgtacc ggtttaaatt taatccacta tattttgtcc
     9481 gattggtaca gatataacag catattccaa agctccttct gcttttctgt ttaccactgc
     9541 aatatttaga gtataatacc aaatttgagt aatggttcta aaacagttaa aaccattttt
     9601 catgagcctg actgattcgt atattcggag aaactgatgc agaatatttt tgaccctttg
     9661 attattcgtg gaaaatccct tattcccatc gtgcaaggcg gtatgggggt cggtgtttcc
     9721 gcatcgggtt tatccagcgc ggtggcgcgt gaaaacggca tcggaacgat tgccagtgta
     9781 gatttgcgcc accttcacga agacctgctc gccgaatccc aaatcaatcc gagtgaagag
     9841 aaatatacgt ctttgaactg taccgcatta gacagggaaa tccaaaaagc caaaagtgct
     9901 tcagagggaa aaggactgat tgcggtcaac gtgatgaagg cggtcaaaga ccacgccgcg
     9961 tatgtccgcc aggcttgcga atcaggggcg gatgcggtcg tgatgggtgc cggcctgcct
    10021 ttagacctgc cggaaatgac cgagggctat cataaggatg tcgcgctgct gccgattctg
    10081 tccgaatcgc gcggtattaa tatcgtcttg aaacgttgga tgaaaaaagg catattgccc
    10141 gatgcgattg tagtcgaaca tcctgcccat gcggccggac atttgggtgc atcaaccgtt
    10201 gaaggcgtaa acgatgccaa attcgacttc aaacgcgtga ttgaggaaac gtttgaagtg
    10261 tttaaaaatt tggggctgga gggagaaaaa atcccgctta ttcttgcggg aggcatggca
    10321 aattttgaaa aagtcaaaac cgccctaaag aactggggag cctccgccgt tcaaatcggt
    10381 acggcttttg ccgttaccga agaaggagat gcacacctca actttaaaaa aacgctcgcc
    10441 agtgcggaaa ctgaaaaagt agtcgaattt atgtctgttg ccggtttgcc ggcgcgcggt
    10501 atccgcacca aattcctaga cagctatatc aggcgcgaag gcaaacttca ggcaaacgcc
    10561 aaagccgacc cgcgccgctg tacccaaggt ttaaactgcc tgaccagctg cggtctgcgc
    10621 gacgggcttt ccaaagcagg gcaattctgt attgatatcc agcttgctgc cgcattccgt
    10681 ggagaagttg ataaggggtt gtttttcagg ggaaaagacc agcttccctt cggtaatgcc
    10741 atccgcaccg tccgcgaaac gatacaatat ctgctgacgg ggagcgaacc tgttgcaacg
    10801 ctcggacgct gacatcaggt aggatttgat ttgcaaacaa aatgccgtcc gaagggcttt
    10861 cagacggcgt ttttcaggtt gtgttccgga acagtgtcga aaaaacggag agaaataaaa
    10921 acgtttttat atgaacaaaa tgccttccgc attatgtcgg acatacaaca caaatgccgt
    10981 ctgaagcctt tcagacggca tttttcaggc tgcctttcgg aatgatgtta aaaaataaac
    11041 gggatgagat acatttattt tcgtccgaca aatcagacca tcacgccgaa taatcaaaca
    11101 atgcctgccc gacattgcat ataacaaacc aatgcaatga aaacacggct tttttatttg
    11161 cttcctgcat tattgaaaag tttgtccatc ggggtcaaat cgaccgcatt gccctggctg
    11221 gtaatccatt tgttctcgac gcgccacacg cctgccgcgt cctccacgcg cacataccag
    11281 tggttggccg gcggaagggt tttgaacacc gcctcatatt ccgccctgcc gttctgcgcg
    11341 ctgccgacgg gcttgagggc gacggtttga tcgtccgcct tgcgggtcgg gtgcatcagc
    11401 agcaggttca aaggctgttt gccgtcaaac tcgccgccga caaacacttt tgccgcattc
    11461 atatcgggag aaatgaggac ctgcaccccg atatgccgtc tgacggcttc ttcatcccga
    11521 tgaagctgga tgtcgatatg cttgccatcc ttataataat cgtccgtaac caaatctgtc
    11581 gcgtgctgct gcgcgacaaa aaacatagcg acgctggcga tgacgacaaa aatcggcccc
    11641 gccatcaaga cccacggcca gacgtgtttg taccaaggct tgattggatt gttttgagac
    11701 acggttattc tccgataaag gttgcgtctt cttccaaaac aaccggcttg ccgtctgatg
    11761 caccgctttc ccggtattgg aagataaact cgataggatg actgcctttg tccgcgtatt
    11821 ccggaatggt ggacacttgg acgggaaggg ttattgtttc gcgcggagcc acttttatac
    11881 cgccttcagg cagcccggtc agggcgattt cgtcaaatcc tttgacactt gcggtaatca
    11941 gctgttcttt ttcgctgttg ttgatgatac gcaggctata tgcgttttcc agccaacctt
    12001 tggcgttttc gcgcaccatt acgccacggt ctttcagaat atcgacttcg accattttgc
    12061 gcgtggacaa accgaccagg aaggcggcga caaccactgc caacaccgcg ccgtaacctg
    12121 ccacgcgcgg tctgagcagc cgttttttaa tgtctttttc ggcatattcg tgttccagcg
    12181 cgctttcggt cgtatagcgt atcaaaccgc tcggataacc cattttgtcc ataatctcat
    12241 cgcacgcgtc gatacaggcg gcgcagccga tacattggta ttgcaggccg ttgcggatgt
    12301 cgatgccgac ggggcagact tggacgcaca tcgcacagtt gatgcagtcg cccaaacccg
    12361 cctcttcctt gttgaccgtt ttcttgcggg cgccgcgcgg ttcgccgcgc tccgcgtcat
    12421 aagaaacaat cagcgtgtcc ttatcgaaca tcgcgctttg gaaacgtgcg tacggacaca
    12481 tatgcaggca cactttttcg cgcataatat gggcgaagaa gaaggtcata aagccgtaaa
    12541 acgctgcggc aaacatcgcg ccgccgcctg ctgctccggt gaataaatcg ggaacaaact
    12601 ggcggatggg gacaaaccag ccggcaaacg tgatgcccgt ccacgcgcag acaaggaaaa
    12661 tcaacaggta tttggtggct ttgatgcgga ttttggtgaa attccacggc gatttttcca
    12721 gcttcaggcg tttgtttcta tcgccttcga ccaggttgtc gatccacagc ataatttcgg
    12781 tgtaaaccgt ttgcgggcag gaatagccgc accacaaacg gccggcaatc gtcgtccacc
    12841 aaaacagccc gaaggcgcaa atcatcagca gcagggcaag gtaaatcaaa tcgcccaccc
    12901 ccaacgacaa tccgaaaatg aagaaatgcc gttcggggat attgaaaacg acggcctgcc
    12961 ttccgctcca gttgaaccac ggaatgacgt aaaacacaaa ctgggtcgcc aatacggcgg
    13021 cgatacgcag tttggcgaac cgtccttccg cctttttggg atggatgcgt tcgccttcgg
    13081 gatggatttg aatcacgctg gcacgcggat cgaacgtttt tttcactttc ggcgcggctt
    13141 ttgtttgttc ggacgtgccg attccggatg ccggactgcc ggcttggttt tccgtggtca
    13201 ttctgcattc cttagatttt tgattgatgg tttgcccgtt accgccgccg ttttgctttt
    13261 cagacgtcat ttttcttgtt tttttaaggc attgtgtttc aagttttgag aaaatccgct
    13321 tttcccaaaa tatattcccg ctattgtaca actttatgcg ccgtccggat gtattgggcg
    13381 aatacatttc ccatccgcat caaaacgccc tgattttacc gcaccgcccg aacaaaatta
    13441 aaatactctt aaaaaacaaa gactaaaaaa acagacaccc ccttatcggc agaaccgccg
    13501 gcgcaagctc ataaacaaac gctatcaac
//
LOCUS       DAXFZM010000065        13347 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.065, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000065 DAXFZM010000000
VERSION     DAXFZM010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13347)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13347)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13347
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.065"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..345
                     /locus_tag="ACFJAG_001552"
     CDS             <1..345
                     /locus_tag="ACFJAG_001552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation inhibitor Maf"
                     /protein_id="HFC3980804.1"
                     /translation="TKLKPTERYNRQTHYGGSQTDGARAQAARQAGEGKPCPTCGRIQ
                     IFGTKTAPSPQHEPPLVKHYYEHGGHSMSNADRAKHARESIKGTQCLTCQRKEGAMMS
                     RYSREQAKKHGL"
     gene            335..883
                     /locus_tag="ACFJAG_001553"
     CDS             335..883
                     /locus_tag="ACFJAG_001553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="suppressor of fused domain protein"
                     /protein_id="HFC3980805.1"
                     /translation="MDYNQTVLSHLQKFWKHHDIKGFTWTLGRIVEELPDFQVFQVIP
                     NHEDEPWVYVSSGIGQFLGQEFFIISPFETPEHIETLAMLASASMHYPDQFQLGKTVN
                     IGRPWVEQSSFRHFLISLPYPYGQELEYMDNVRFFWLLPITQTERLFLNTHSVEELET
                     KFDEAGIDYLDINRASTVWQAG"
     gene            1180..1533
                     /locus_tag="ACFJAG_001554"
     CDS             1180..1533
                     /locus_tag="ACFJAG_001554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980806.1"
                     /translation="MGIKNEQIIICKKYNTEIYPVSDVSKIGVAENVKQTGLYPINGL
                     RHRPKGDTNGWYIWAGENFSYDKNFFLPLHTFHLQIWRPEIIPFLTLPPGYRFLIGEN
                     GYEDVWFDELLLNDN"
     gene            1523..1846
                     /locus_tag="ACFJAG_001555"
     CDS             1523..1846
                     /locus_tag="ACFJAG_001555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E inhibitor RraB"
                     /protein_id="HFC3980807.1"
                     /translation="MIIDEKSTSDVLKQYQELGFDLTKPMIIEFFIGGSQKNLQSIES
                     QLISYRQDFQISIEQDEFGEMWTCYCSVNIVPSLENILAIETTLFGIAQKNDCNYEGF
                     GSYGN"
     gene            1905..2132
                     /locus_tag="ACFJAG_001556"
     CDS             1905..2132
                     /locus_tag="ACFJAG_001556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980808.1"
                     /translation="MDIKFNTLGVILNGVNPEEKFIKIIDGQENTGGFLILLSSNDKF
                     SSFDSYDDWVENLEILKEYLQESHWIIKWVG"
     gene            2259..2803
                     /locus_tag="ACFJAG_001557"
                     /pseudo
     CDS             2259..2803
                     /locus_tag="ACFJAG_001557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227004.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="suppressor of fused domain protein"
     gene            2938..3567
                     /locus_tag="ACFJAG_001558"
     CDS             2938..3567
                     /locus_tag="ACFJAG_001558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HINT domain-containing protein"
                     /protein_id="HFC3980809.1"
                     /translation="MVKTADGYKAIAHIQAGDRVLSKDEASGETGYKPVTARYGNPYR
                     ETVYIKVSDGIGNSQTLISNRIHPFYSDGKWIKAEDLKAGSRLLSESGRTQTVRNIVV
                     KPKPLKAYNLTVADWHTYFVKGSQAETEGVWVHNSCPPKRTGSSKNEKHGDGGRSQIS
                     AESKIAELTNKIIPGMPKNERLKIEKTIKNIAKNANRKTKGEEHGRRGR"
     gene            3548..4003
                     /locus_tag="ACFJAG_001559"
     CDS             3548..4003
                     /locus_tag="ACFJAG_001559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980810.1"
                     /translation="MVDAVVKTPEFLPFTSVGIFRFGADITEYKNILETFMYEPPDEF
                     GTEYYESPDSNLLISVEKNKIISIFCYQELYFMGVNIIGLNFEIFKQLFHYPKLNDID
                     KCYLSNESYPTYIYDFDEIGVQAWEAKGKIVTIIAGGKDNYSTEPYYDE"
     gene            4072..4449
                     /locus_tag="ACFJAG_001560"
     CDS             4072..4449
                     /locus_tag="ACFJAG_001560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 41 family protein"
                     /protein_id="HFC3980811.1"
                     /translation="MCEFKDFRRNIPCFEEYDENSFIGKWYDDGVWDDEEYWKLENDL
                     IEVRRKYPYPMDIPRDIVIGIGTIIEFLMVPNWKLFTIKSSPWLPDSVGIHERYERFT
                     TMLRYIFTEKDIVNVRFDYYNKK"
     gene            complement(4513..6726)
                     /locus_tag="ACFJAG_001561"
     CDS             complement(4513..6726)
                     /locus_tag="ACFJAG_001561"
                     /EC_number="2.7.6.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0015970 - guanosine tetraphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HFC3980812.1"
                     /translation="MTAISPIQDTQSATLQELREWFDSYCAALPDNDKNLIGTAWSLA
                     QEHYPADAATPYGEPLPDHFLGAAQMVDELDLLPDAVAATLLADIGRYVPDWNLLVSE
                     RCNSTVAELVKGVDEVQKLTHFARVDSLATSEERAQQAETMRKMLLAMVTDIRVVLIK
                     LAMRTRTLQFLSNAPDSPEKRAVAKETLDIFAPLANRLGVWQLKWQLEDLGFRHQEPE
                     KYREIALLLDEKRTERLEYIENFLDILRTELKKYNIHFEVAGRPKHIYSIYKKMVKKK
                     LSFDGLFDIRAVRILVDTVPECYTTLGIVHSLWQPIPGEFDDYIANPKGNGYKSLHTV
                     IVGPEDKGVEVQIRTFDMHQFNEFGVAAHWRYKEGGKGDSAYEQKIAWLRQLLDWREN
                     MAESGKEDLAAAFKTELFNDTIYVLTPHGKVLSLPTGATPIDFAYALHSSIGDRCRGA
                     KVEGQIVPLSTPLENGQRVEIITAKEGHPSVNWLYEGWVKSGKAIGKIRAYIRQQNAD
                     TVREEGRVQLDKQLAKLTPKPNLQELAENLGYKKPEDLYTAVGQGEISNRAIQKACGT
                     LNEPPPVPVSATTIVKQSKIKKGGKTGVLIDGEDGLMTTLAKCCKPAPPDDIAGFVTR
                     ERGISVHRKTCPSFRHLAEHAPEKVLDASWAALQEGQVFAVDIEIRAQDRSGLLRDVS
                     DALARHKLNVTAVQTQSRDLEASMRFTLEVKQVNDLPRVLAGLGDVKGVLSVTRL"
     gene            6869..7510
                     /locus_tag="ACFJAG_001562"
     CDS             6869..7510
                     /locus_tag="ACFJAG_001562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GrxB family glutaredoxin"
                     /protein_id="HFC3980813.1"
                     /translation="MKLYIYDHCPFCVRARMAAGLFGADVEEVVLANDDEATPIGMIG
                     AKQVPVLQKEDGSFMGESLDIVCHFDREGRLKDEVRPEIQAWLDKVGGYNNKLVQPRL
                     IKIGLPEFVTPEAVKYFTDKKEKSIGSFSANLNKTAQYLERINADLQELENLMDGTSD
                     GINGGIGMEDILVFPVLRNLTVVRGIAFPRKTMDYLIGMSEKSGVPLYFDRAL"
     gene            complement(7582..8220)
                     /locus_tag="ACFJAG_001563"
     CDS             complement(7582..8220)
                     /locus_tag="ACFJAG_001563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HFC3980814.1"
                     /translation="MFQNFDLGVFLLAVLPVLLAITVREVARGYTARYWGDNTAEQYG
                     RLTLNPLPHIDLVGTIIVPLLTLMFTPFLFGWARPIPIDSRNFRNPRLAWRCIAASGP
                     LSNLAMAVLWGVVLVLTPYAGGAYQMPLAQMANYGILINAILFALNIIPILPWDGGIF
                     IDTFLPAKYSQAFRKIEPYGTWIILLLMLTGVLGAFIAPIVRLVIAFVQMFV"
     gene            8476..9327
                     /locus_tag="ACFJAG_001564"
     CDS             8476..9327
                     /locus_tag="ACFJAG_001564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0031992 - energy transducer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HFC3980815.1"
                     /translation="MDKERILTPAVVFSVALLHLAIVALLWQAHKLPVIESGNVIEFV
                     DLGDFGGGGGAPEGAGAPAAPEPQPAPDPPKPVEPPKPVLKPAVTKKADADIQQPKEK
                     PKPEEKPKPEPEPEAKPAPKPAEKPAEKPSEKPAEHSGNASAKAGSEQGNGEGKGTGT
                     KGDGTGRGEGSGKGSGGAKGEHGEGAGGSGGGTGVGSSKGNPLRANGSIPRPAYPALS
                     MENDEQGMVVLSVLVSPGGHVESVKVVKSSGFSRLDNAARKAAQNGHFQANAWTEFKV
                     PVKFELN"
     gene            9393..10055
                     /gene="exbB"
                     /locus_tag="ACFJAG_001565"
     CDS             9393..10055
                     /gene="exbB"
                     /locus_tag="ACFJAG_001565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-system energizer ExbB"
                     /protein_id="HFC3980816.1"
                     /translation="MNLKLVFESGDPVLIGVFVLMLLMSTVTWCLVVLRCIKLYRARK
                     GNAAVKRHMRDTLSLNDAVEKVRAVDAPLSKLAQEALQSYRNYRRNEASELAQALPLN
                     EYLVIQIRNSMAQIMRRFDYGMTALASIGATAPFIGLFGTVWGIYHALINIGQSGQMS
                     IAAVAGPIGEALVATAAGLFVAIPAVLAYNFLNRGTKILTQDLDAMAHDLHVRLLNQK
                     DS"
     gene            10058..10492
                     /locus_tag="ACFJAG_001566"
     CDS             10058..10492
                     /locus_tag="ACFJAG_001566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ExbD/TolR family protein"
                     /protein_id="HFC3980817.1"
                     /translation="MAFGSMNSSDDSPMSDINVTPLVDVMLVLLIVFMITMPVLTHSI
                     PLELPTASEQANKQDKQPKDPLRLTIDANGGYYVGGDSASKVEIGEVESRLKAAKEQN
                     ENVIVAIAADKAVEYDYVNKALEAARQAGITKIGFVTETKAQ"
     gene            complement(10993..11421)
                     /locus_tag="ACFJAG_001567"
     CDS             complement(10993..11421)
                     /locus_tag="ACFJAG_001567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01244 family sulfur transferase"
                     /protein_id="HFC3980818.1"
                     /translation="MAILKLDEHLYISPQLTKADAEQIAQLGIKTVICNRPDREEESQ
                     PDFAQIKQWLEQAGVTGFHHQPVTARDIQKHDVETFRQLIGQAEYPVLAYCRTGTRCS
                     LLWGFRRAAEGMPVDEIIRRAQAAGVNLENFRERLDNARV"
     gene            complement(11486..13234)
                     /locus_tag="ACFJAG_001568"
     CDS             complement(11486..13234)
                     /locus_tag="ACFJAG_001568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M61 family metallopeptidase"
                     /protein_id="HFC3980819.1"
                     /translation="MIHYKIAPSPLDHEWHILLKFTQDNDFPIEISLPNWVPGSYLIR
                     DFSRHITSIHASCNGTSMPLEQIAKNRWHTAAVRGEWQIRYTVYAFDLSVRGSFLTTE
                     RGFFDGSCLFLKVEGTETLPHRLELTGIPPEWRIATTLPETGRLVFQTASYDELIDRP
                     VEMGLIEFLDFEAAGIPHTIALSGIYPDFDRDRLVSDIKKICETELAMFSSPAPFEKY
                     LFLLHVGDHIYGGLEHTDSTALLADRHSLPPYGMTDADDAYTTLLGLFSHEYFHAWNV
                     KSIKPAAFAPYDLDKENYTEQLWAFEGITSYYDDLFLARSRTISPEFYLNLLAQGITR
                     VQQTRGRLRQTLAESSFTAWNKFYKPDENSPNAIVSYYQKGALAALCLDLIIRNRSNG
                     RHSLDTVMDKLYREWRDTHSGIPEKHWQIRCQEITGLDLTDFFQTALYSTEDLPLAEC
                     LATTGVKLTFLPLPRQHGGGYAEHIFPIPPTGDFGARFKQNADHIVLTHVFNGGSAES
                     AALCPQDKIIALDGYACTDFAAQWARYHVRAKINIHFFRAGILRQTVLTVQATAADTA
                     ILHITDRNLLENWLFG"
BASE COUNT         3509 a         2866 c         3572 g         3400 t
ORIGIN      
        1 accaaactaa aaccgacaga acgttataat cgtcaaacgc attatggagg ttctcaaaca
       61 gatggagcaa gggctcaggc agcaagacag gcaggagaag gtaaaccttg tccaacttgt
      121 ggtagaattc agatatttgg tacgaaaacc gcaccaagtc cgcaacatga acccccatta
      181 gtaaaacatt actatgaaca tggtggtcac tctatgagca atgctgatcg agcgaaacat
      241 gccagggaaa gcataaaagg aactcaatgt ttaacatgtc aaaggaaaga gggtgcgatg
      301 atgtcaagat attcgagaga acaggctaaa aagcatggac tataaccaaa ctgttttatc
      361 tcacttgcaa aaattttgga aacatcatga tattaaagga tttacttgga ctttaggaag
      421 aattgttgaa gaacttcccg atttccaagt tttccaagtg attcctaatc atgaagatga
      481 gccttgggtt tatgtcagct ctgggatagg tcaattttta gggcaggagt tttttatcat
      541 cagcccgttt gaaacacctg aacatattga gaccttggca atgctggcat ctgcaagtat
      601 gcattatcct gatcaatttc aattagggaa aaccgtcaat atcggtagac cgtgggtcga
      661 gcaatcatcc ttccggcatt ttctgatttc tctgccttat ccttatgggc aagagttgga
      721 atatatggat aatgtccgat ttttctggtt attgccaatt acccagacag aaagactttt
      781 cttgaatact cattcggtag aagaattgga aacgaaattt gatgaagcgg gtattgatta
      841 tttagatata aatcgtgcga gtactgtctg gcaggcagga taaaaattcg gcaatcaaaa
      901 tgccgtctga aacaagtttg gactttcaga cggtattctg atgaatggaa caggatactg
      961 ggaactgagt tcttcaaaaa tcctatctcc gtcccttata cgtcggtgct ttagtcaaaa
     1021 cggcagacgg atgaaaaatt attgcccgta tccttgccaa agatgaagca agatgaagcc
     1081 aggtaattga atcggtacaa gcgcaatgtc cgacttgttc tgcaaaacag ggagggagat
     1141 taagccaata ttcaaaagaa cagaaaaaga aactgagtaa tgggaataaa aaatgaacaa
     1201 ataataattt gtaaaaaata taatacagaa atatatcctg tttccgatgt ttcaaaaatc
     1261 ggtgttgctg aaaatgtcaa acagacaggc ctgtatccga ttaacgggtt aaggcaccgt
     1321 cccaaaggtg atactaacgg ttggtatatc tgggccggtg aaaacttctc ctatgataaa
     1381 aattttttcc tgcccttgca tacgttccat ttgcaaatat ggcgacccga aatcatcccc
     1441 tttttgacac ttccgcccgg ttaccgtttt ttaattgggg aaaacggtta tgaagacgta
     1501 tggtttgatg aattgctatt aaatgataat tgacgaaaaa tctacttcag atgtactgaa
     1561 acaatatcaa gaactagggt ttgatttgac aaaacctatg ataatagagt tttttatagg
     1621 aggttctcaa aaaaatctgc aatcaataga aagccaactc atttcttatc ggcaagattt
     1681 tcaaatcagt attgaacaag atgaattcgg agaaatgtgg acttgctatt gttccgtcaa
     1741 tatcgtccct tcccttgaaa acattttagc tattgaaact acgttatttg gtattgcaca
     1801 aaaaaatgat tgtaattatg aaggttttgg ttcgtatggg aactaacaaa aagtgtaggt
     1861 tgggttgaaa aaaccatatt cccattaaag attagggtgt gtctatggac ataaaattca
     1921 atactttggg ggttatcctg aatggggtca atcctgaaga aaaattcata aaaattattg
     1981 atggccagga aaataccggt ggatttctga tactgttatc ttcaaatgac aaattctcat
     2041 catttgacag ttacgatgac tgggtcgaaa acttagaaat attaaaagaa tacctgcaag
     2101 aatctcattg gataataaag tgggtcggat agtcggcaaa cgtagtccgt ttgaaacgct
     2161 tttacttttc agacggactt tctaccaatg ggaacaaggc gttttgtctc aatccggttt
     2221 atgattattc gatacagtga tgggaagcta agaaaaatat gattaatcat attgaaaaat
     2281 atataggcac tatttctcat ggctcgaaaa gcgattcggg aagtcagtac aaattaaata
     2341 tcgcagctat tccctcttcc cctaacaggg atttaaaaac ttatattact ttagggttaa
     2401 gcaaacatga tctgaattat aaaagcagat ttgaaatact ttttgtatgt tctttaaaat
     2461 atgatgaaaa tcagattttc ccatttttaa gatggttagc agaaaccatc attgagaata
     2521 aaaaaaatcc ttcttcgggg gcaggttgtt tatttgccta gaagcattgt taaattcaac
     2581 aaaaatggac gcactgtatg tttccgcccc attttatttc gacgatgatt tccaagtctg
     2641 ttatggcgaa cactacaata ttgttttccc tttgcttgtc cccttgtata aacaggaagc
     2701 cgaattggtg gaaaaaaagg gttggaatgc ttttgagcag ttcttgttgg ataatgaagt
     2761 tggcaacctt tcggatatga ataggaagcc gtttgtttgg taagggcttt cttaaatttg
     2821 attaaaggtc gtctgaaacc gtgtttaact ttcagacaac ctttccttca tttgaaacag
     2881 aatattgaaa actaagttct tcaaaaatcc tacacctgct ccttccacgg cagcaccttg
     2941 gtcaaaacgg cagacggcta caaagccatc gcccatattc aagccggaga ccgcgtcctt
     3001 tccaaggacg aggcaagcgg agaaacggga tacaaacccg ttaccgcccg atacggtaat
     3061 ccgtatcggg aaaccgttta cattaaagtt tcagacggca tcggtaacag ccaaaccctg
     3121 atttccaacc gcatccaccc gttttattcg gacggcaaat ggattaaggc ggaagattta
     3181 aaagcgggaa gcagactgtt atccgaaagc ggcagaaccc aaaccgtccg caacatcgtt
     3241 gtcaaaccaa aaccgctcaa agcctacaat ctgaccgtcg ccgattggca tacctacttc
     3301 gtcaagggca gtcaggcgga aacggaaggg gtttgggttc ataattcttg tccgcctaaa
     3361 agaacaggaa gctccaagaa tgaaaaacat ggagacggcg gtcgaagtca aatatcagcg
     3421 gaatcaaaaa ttgctgaatt aacaaataaa attattcccg gaatgcccaa aaatgaacgc
     3481 ttaaagattg agaaaacaat caaaaatatt gcaaaaaatg ccaatcgaaa aacaaaagga
     3541 gaagagcatg gtcgacgcgg tcgttaaaac tcccgaattt ttacctttta cttctgtagg
     3601 aatattccgt tttggtgcgg atataacaga gtacaaaaac atactggaaa cttttatgta
     3661 tgaacctcct gatgagtttg gaacagaata ttatgaatct cccgactcaa atttactcat
     3721 ttccgtcgaa aaaaacaaaa ttatttcgat attttgttat caggagttat attttatggg
     3781 cgttaatata ataggtctaa attttgaaat ttttaaacaa cttttccatt accccaagtt
     3841 aaacgatatt gataaatgtt atttatcgaa tgaatcttat ccgacatata tctatgattt
     3901 tgatgaaata ggagtacaag catgggaagc aaaagggaaa attgttacta tcattgccgg
     3961 gggcaaagac aattattcga cagaacctta ctacgatgaa taacattaca gaaaagaaac
     4021 aagaaacggt acatttgata aaaacctaaa tcgtattgga gattaattat tatgtgcgag
     4081 ttcaaggatt ttagaagaaa catcccttgt tttgaagagt atgacgaaaa ttcatttatt
     4141 ggtaaatggt atgatgacgg ggtgtgggat gatgaagaat attggaagct ggagaatgat
     4201 ttaatcgagg ttaggagaaa atatccttat ccgatggata taccaaggga tatcgtgatt
     4261 ggaatcggta ccattattga gtttttaatg gttccaaatt ggaaactttt tacaattaaa
     4321 tcttcccctt ggttgcctga tagtgtggga attcatgaac gttatgaaag attcacaacg
     4381 atgctccgtt atatttttac cgagaaagac atagtcaacg tgcgatttga ttattacaac
     4441 aaaaaatagc aaaacccggc aatcaaaatg ccgtctgaag cgttatccgg ctttcagacg
     4501 gcatttttgt atttaaagcc gggtaacgct caatacgcct ttgacatcgc cgaggccggc
     4561 gaggacgcgc gggaggtcgt tgacttgttt gacttcgagc gtgaacctca tgctggcttc
     4621 caagtcgcgg gactgggttt gtacggcggt aacgttgagt ttgtggcggg cgagcgcgtc
     4681 ggatacgtcg cgcaaaagcc cggagcggtc ttgggcgcgg atttcgatat cgacggcgaa
     4741 cacttgccct tcctgcaacg ccgcccaact tgcgtccagt actttttcgg gcgcgtgttc
     4801 ggcaaggtgt cggaaagagg ggcaggtttt gcggtggacg gaaatgccgc gctcgcgggt
     4861 aacgaagccg gcaatatcgt cgggcggcgc gggtttgcag catttggcaa gcgtggtcat
     4921 caagccgtct tcgccgtcga tgagcacgcc ggttttgcca ccttttttga ttttggactg
     4981 tttgacgatg gtggttgcgc tgacgggcac gggcggcggt tcgttcagcg tgccgcaggc
     5041 tttttggatg gcgcggttgg aaatttcgcc ttgtccgacg gcggtgtaga ggtcttctgg
     5101 ctttttgtag ccgagatttt cggcaagctc ttgcaggttg ggtttgggcg tgagtttggc
     5161 aagctgcttg tcgagttgga cacggccttc ttcgcgcacg gtgtcggcgt tttgctggcg
     5221 gatgtaggcg cggattttgc cgatggcctt gccggatttg acccagcctt cgtaaagcca
     5281 gttgacggaa ggatgccctt ctttggcggt aatgatttcg acgcgctgtc cgttttcgag
     5341 cggggtggac agcggcacaa tctgcccttc gactttcgcg ccccggcagc ggtcgccgat
     5401 gctgctgtgc agggcgtagg cgaagtcgat gggggttgcg cccgttggca gagagaggac
     5461 tttgccgtgc ggggtcaaaa cataaatcgt gtcgttgaaa agctcggttt tgaaggcggc
     5521 ggcgaggtct tccttgccgc tttccgccat attttcgcgc cagtccaaga gttggcgcaa
     5581 ccaggcgatt ttttgttcgt aggcggaatc gcctttgccg ccttctttgt aacgccagtg
     5641 ggcggcgaca ccgaattcgt tgaattggtg catatcgaag gtgcggattt gcacttccac
     5701 acctttgtct tccgggccga cgatgacggt gtgcaaactt ttataaccgt tgcctttggg
     5761 gttggcgatg tagtcgtcga actcgccggg aatgggctgc cagaggctgt ggacgatgcc
     5821 cagcgtggtg taacactcgg ggacggtatc gaccagaatc cgcacggcgc ggatgtcgaa
     5881 caggccgtcg aagctgagtt ttttcttcac catttttttg taaatggagt agatgtgttt
     5941 cggacggccg gcgacttcaa agtggatatt gtattttttg agttccgtac gcaggatatc
     6001 gaggaagttt tcgatgtatt cgaggcgttc ggtgcgtttt tcgtccaaaa gcagggcgat
     6061 ttcgcggtat ttttcgggtt cttgatggcg gaagcccaaa tcttcgagct gccatttgag
     6121 ctgccacacg cccaagcggt tggcgagcgg ggcgaagatg tcgagggttt ctttggcgac
     6181 ggcgcgtttt tcagggctgt cgggggcgtt gcttaaaaat tgcagggtgc gcgtacgcat
     6241 cgccagtttg attaatacga cgcggatgtc ggtaaccatc gccagcagca ttttccgcat
     6301 ggtttcggct tgctgcgcgc gctcttcgga agtggcgagg ctgtccaccc gggcgaagtg
     6361 ggtgagcttc tgcacttcgt ccacaccttt gaccagctcg gcgacggtgc tgttgcagcg
     6421 ctcggaaacc aataggttcc aatcggggac gtagcgtccg atgtcggcaa gcagggtggc
     6481 ggcgacggca tcgggcagca ggtcgagttc gtcgaccatt tgcgccgcgc cgaggaagtg
     6541 gtcgggcagc ggctcgccat acggcgtggc ggcatcggca ggataatgtt cctgcgccag
     6601 cgaccatgcg gtaccgatga ggtttttatc gttgtccggc agagcggcgc agtagctgtc
     6661 gaaccattcg cgcaattctt gcagggtcgc gctttgcgtg tcttgaatcg ggctgatggc
     6721 ggtcatgatg ggatcttccg ttccgataaa aacgagttca ttgtaacagc ttatttattt
     6781 acggtgcata ggcgggaaga taaacttgtt tcgggcggcg ccgggtgtta aggtagccgg
     6841 taccgacagg ttgacgagga atattttgat gaaactgtat atttacgacc attgcccgtt
     6901 ttgcgtgcgt gcgcggatgg ctgccgggct gtttggtgct gacgttgaag aagtcgtgct
     6961 ggcaaacgac gacgaggcaa cgccgatcgg tatgatcggt gcgaaacaag tgcccgtcct
     7021 gcaaaaagaa gacggttcgt ttatgggcga gagtttggac attgtgtgcc atttcgaccg
     7081 agaaggccgt ctgaaagacg aagtccgccc cgagatacag gcgtggctgg acaaggtagg
     7141 cggatacaac aacaaattgg ttcagccacg cttgatcaaa atcgggctgc ccgaatttgt
     7201 aacgccggaa gcggtgaaat atttcacaga caaaaaagag aaaagcatcg gcagcttttc
     7261 cgccaatttg aataaaaccg cccaatacct tgaacggata aacgcagatt tgcaagagtt
     7321 ggagaatttg atggacggta cttcagacgg catcaacggt ggaatcggta tggaggatat
     7381 tttggttttc cccgttttga ggaatctgac cgtggtgcgc ggcatcgcgt tccctcggaa
     7441 gacgatggat tatttaatcg gtatgagtga aaaatcaggc gtgccgcttt atttcgacag
     7501 ggcattgtaa aaccaaaaaa aagcggcagg gcaatatgtc cttccgcgtt ttttggaacg
     7561 tttatgccgt ctgagagcca gtcagacgaa catctgcaca aacgcaatca ccagccgcac
     7621 aatcggtgca ataaacgcac ccaaaacccc ggtcagcata agcagcagga taatccacgt
     7681 cccataaggt tcgattttgc ggaacgcttg cgaatatttc gccggcagga aggtgtcgat
     7741 gaaaatgccg ccgtcccaag gcaggatggg gatgatgttg agcgcgaaca aaatcgcatt
     7801 gatcagaata ccgtagtttg ccatttgagc cagcggcatc tgatacgccc cgccggcata
     7861 cggagttagc accaaaacca cgccccacag aacagccatc gccagattcg acagcgggcc
     7921 ggacgcggca atgcaacgcc atgcaaggcg cgggttgcgg aagttgcgcg aatcgatagg
     7981 aatcggacgc gcccagccga acaggaaggg cgtgaacatc aaagtaagca gcggtacgat
     8041 gattgtgccg accaaatcga tatggggcag ggggttcagt gtcagcctgc cgtattgttc
     8101 ggcagtgttg tctccccagt agcgcgccgt atagccgcgc gccacctccc tgacggtaat
     8161 ggcgagcagc acgggcagga cagcaagcag aaacacgccc aagtcaaaat tttgaaacat
     8221 ggttttcctt tgaacagatg tggtgtgcag cccgaaacgg ctgacagaca gaagcggcaa
     8281 tatatcatct aacctgattt tattggaata agaaatcaga cggaatcatt ttttctgccg
     8341 gcccgttatc tgatgatttg ctgtaatacc gcgtttaaac acggtttgcc tatgaatgga
     8401 gcaggcgttc acatgacaac aaattataaa aaataggttg caaataggaa ttgttgctat
     8461 tattatgccc gaattatgga taaagaacga attttaaccc ccgcagtcgt gttttccgtc
     8521 gcactgctgc atttggcaat agtggcattg ctctggcagg cgcacaagct gcccgtgata
     8581 gagtcaggaa atgttatcga atttgtcgat ttgggcgatt ttggcggagg gggcggcgca
     8641 cccgaaggcg caggcgcgcc tgccgcgccc gaaccgcaac ccgcgcccga tccgcccaaa
     8701 cctgtcgaac cgcccaagcc ggttttgaag ccggcggtta caaaaaaggc ggatgcggat
     8761 attcagcaac ctaaggaaaa gccgaaaccc gaagaaaaac ctaagcccga acccgaaccg
     8821 gaagcgaagc ctgccccgaa accggcggaa aaaccggcag agaagccgtc tgaaaaacct
     8881 gccgaacatt ccggtaatgc ttctgccaaa gccggcagcg agcagggtaa tggggaaggt
     8941 aagggaaccg gtaccaaagg cgacggaacg gggcgcggag aaggcagcgg taaaggaagc
     9001 ggcggtgcca aaggcgaaca cggggaagga gccggcggca gcggcggcgg aaccggtgtc
     9061 ggcagcagca aaggcaatcc tttacgcgcc aacggcagca tcccgcgccc ggcctatccc
     9121 gcactttcta tggaaaatga cgagcagggt atggttgttt tgagcgtttt ggtttctccg
     9181 ggcggtcatg tcgagtccgt caaagtggtg aaaagcagcg gtttttcccg tttggacaat
     9241 gcggcacgca aagcggcgca aaacgggcat tttcaagcca atgcctggac ggagtttaaa
     9301 gtccccgtca agtttgaatt gaattaggcg gttgtcgcgg cagtttgcgg cagcttggat
     9361 gtttgattgg ttttttcagt gttggaatca ttatgaattt gaaattagtg tttgaatcgg
     9421 gcgatcccgt cctgatcggt gtgtttgtgt tgatgctgtt gatgagtacc gtaacgtggt
     9481 gtctggttgt cttgcgctgc atcaagctgt atcgggcgcg caaagggaat gccgccgtca
     9541 aacggcatat gcgcgatact ttgtcgctga acgacgcggt cgaaaaagtg cgcgccgtcg
     9601 atgcgccttt gtccaaactg gcgcaagagg cattgcagtc ttaccgcaac taccgccgaa
     9661 acgaagcgtc cgaactggcg caggctttgc cgttgaacga gtatttggtc attcaaatcc
     9721 gcaacagtat ggcgcagatt atgcgccggt ttgattacgg gatgaccgcg cttgcctcca
     9781 tcggcgcgac cgcgccgttt atcgggttgt tcggcacggt ttgggggatt taccacgccc
     9841 tgatcaatat cgggcaaagc gggcagatga gtattgcggc ggttgccggc ccgattggcg
     9901 aggcactggt ggcgacggcg gcgggtttgt tcgtggcgat tccggcggtg ttggcataca
     9961 acttcctcaa tcgcggcaca aaaatactga cccaggattt ggatgcgatg gcgcacgatt
    10021 tgcatgtccg cctgcttaat caaaaggata gctgattatg gcatttggtt cgatgaattc
    10081 cagcgacgat tctccgatgt ccgacatcaa cgttacgccg ttggtggacg tgatgctggt
    10141 gttgctgatt gtgtttatga ttactatgcc ggtgctgacg cattccatcc ctttggaact
    10201 gccgaccgcg tccgagcagg caaacaagca ggacaaacag cctaaagacc ccctgcgcct
    10261 gacgattgat gcgaacggcg gctattatgt cggcggggat tctgcaagca aagtggaaat
    10321 cggggaagtg gaaagccgtc tgaaagccgc caaggagcag aatgaaaacg tgattgtggc
    10381 gattgcggca gacaaggcgg tggaatacga ttatgtaaac aaagctttag aagccgcccg
    10441 tcaggcagga atcaccaaaa tcggttttgt aaccgaaacc aaggcgcaat aaagttcgac
    10501 gcttgaacga atgccgcctg aaagtctttc agacggcatt tcttatgttt aatcagttat
    10561 atatagttga ttaaaacaaa aatgagacga cagagcaccg tctccatttc tgcgcaggcg
    10621 ggaatacaag catctgattt ttcttttatt ttcaaacatt actgaaatgg gtaagtctgg
    10681 agtcctgcct gcgcgagaat aatgaaaatg tgcatttcta atttttatag tggattaaca
    10741 aaaatcagga caaggcaacg aagccgtaga cagtacaaat agtacggaac cgattcactt
    10801 ggtgcttcag caccttagag aatcgttctc tttgagttaa ggcgaggcaa cgccgtactg
    10861 gtttttgtta atccgctata cccgctgtaa aaacggagaa ggacagagga cggcagtaag
    10921 gtttgccgtc ctctttttca agttgcggtg gaatgccgct tgaaggtgtg gtttaaacgt
    10981 ttcggcttgt aatcagacgc gggcgttgtc cagccgctct ctgaagtttt ccagatttac
    11041 acctgccgct tgggcgcggc ggatgatttc gtcaaccggc ataccttctg ccgcccggcg
    11101 gaagccccac aggagggagc agcgcgtacc ggtccggcaa taggcaagga cgggatattc
    11161 ggcttgtccg atgagttggc ggaaggtttc gacatcgtgt ttttggatgt cgcgtgcggt
    11221 aacgggttgg tgatggaatc cggtaacgcc tgcttgttcc agccactgtt tgatttgggc
    11281 gaagtcgggt tgcgattctt cttcgcggtc ggggcggttg cagatgacgg ttttgatgcc
    11341 aagttgcgcg atttgttccg catcggcttt ggtcagttgc ggggagatgt agagatgttc
    11401 gtcaagtttg agaatcgcca ttttgtttcc tttgctttgc ggttggtgtt cagacggcat
    11461 tttgtgtgca atgccgtctg aaagtttaac cgaacaacca gttttccaac aggttgcgat
    11521 ctgtgatgtg taggatggca gtatccgccg ccgttgcctg aaccgtcaag acggtttgac
    11581 gcaatatgcc tgcacggaag aagtggatat tgatttttgc cctgacgtgg tatcgggccc
    11641 attgtgcggc aaagtcggtg caggcataac cgtctaaagc aatgattttg tcttgcgggc
    11701 acagtgccgc agattccgca cttccgccgt tgaagacatg ggtcaggacg atatggtcgg
    11761 cgttttgttt gaagcgtgcg ccgaaatcgc ccgtcggcgg gatggggaaa atgtgttccg
    11821 catatccgcc gccgtgttgt cggggaagcg gcaggaaggt cagtttcacg cctgtggttg
    11881 ccaggcattc ggcaagcggc aaatcttcgg tgctgtacaa tgccgtctga aaaaaatctg
    11941 tcaaatccaa gccggtaatt tcctgacaac ggatttgcca gtgtttttcc ggaatacccg
    12001 agtgtgtgtc cctccactcc cgatagagtt tgtccattac cgtatcaagg gaatgtctgc
    12061 cgttgcttcg gttgcgtatt atcagatcaa ggcacaatgc ggcaagtgcg cctttttggt
    12121 agtagctgac gatggcgttg gggctgtttt catccggttt gtaaaatttg ttccacgcgg
    12181 taaaactcga ttccgccaag gtctgcctca aacggccgcg ggtttgttgt acgcgcgtaa
    12241 tgccttgtgc tagcaggttt aaataaaatt cgggcgagat ggtgcggctg cgtgccaaaa
    12301 acaaatcgtc gtaataggat gtaatgcctt cgaatgccca tagttgttcg gtatagtttt
    12361 ctttgtcgag gtcataaggg gcgaatgcgg caggtttgat ggatttgacg ttccacgcgt
    12421 gaaaatattc gtgggagaaa agtccgagca atgtggtgta ggcatcgtcg gcatcggtca
    12481 taccgtacgg cggaaggctg tggcgatcgg cgagcagtgc ggtgctgtcg gtgtgttcca
    12541 aaccgccgta aatatggtcg ccgacgtgga gcaggaacaa atatttctca aatggggcag
    12601 gggaggagaa catcgccagt tctgtttcgc agattttttt gatgtccgaa accagcctgt
    12661 cgcggtcgaa atcgggatat atgccgctta aggcaatcgt gtgcggaatg cctgccgcct
    12721 caaaatctaa aaattcaatc aagcccatct cgacaggtcg gtcaatcaat tcgtcataag
    12781 atgccgtctg aaagacaagc ctccctgttt ccggcagcgt tgtggcaata cgccattcgg
    12841 gtggaatgcc tgtcaattcc aagcggtgcg gcagcgtttc cgttccttcg actttcaaaa
    12901 acaggcacga tccgtcaaaa aaaccgcgtt ctgtcgtcag gaaagaacct cgaaccgaca
    12961 aatcgaatgc atatacggtg tagcggattt gccactcgcc gcgtacggcg gcagtgtgcc
    13021 agcggttttt tgcaatttgt tcgagcggca tggacgtgcc gttgcaggat gcatggatag
    13081 aagtgatgtg gcgggaaaaa tcccgaatca gatagctgcc cggcacccaa ttcggaaggc
    13141 ttatttctat aggaaaatca ttatcttgtg tgaatttcag caggatgtgc cattcatggt
    13201 ctagagggga cggggctatt ttataatgaa tcataactat caaatatatc gttaaacggg
    13261 atggattaaa tgcctttaaa atgcagctta acctacatca ataaagtgcc acaaaaaggg
    13321 aaaattggaa acaaaagcaa tggcggc
//
LOCUS       DAXFZM010000066        13195 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.066, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000066 DAXFZM010000000
VERSION     DAXFZM010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13195)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13195)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13195
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.066"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..1295
                     /locus_tag="ACFJAG_001569"
     CDS             <1..1295
                     /locus_tag="ACFJAG_001569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="YadA-like family protein"
                     /protein_id="HFC3980820.1"
                     /translation="ISRVTYLLIWYSPKKYAVALGSSSTASGEYSYASGYNSVASGNK
                     SYAAGYASVASAEGSVVIGDSRQVKPEADQGVAVGSKATVKNKAKQRVAVGSEAKVNA
                     ERGIAIGKEAKAGGKTTNTLLDGPAYYADAIAVGYQAEAGKGGAIALGKQAKATKQNG
                     MALGVESEAAGDFSTAVGNESKAKGQGGVGLGNQSKAEADFAVAVGNKAEATKENSLV
                     IGRYARANGNHSVSLGSRSEIKDGVSNSVAPGYGSVASENNVVSVAYKETPQSTELSY
                     RKIVGVDDGVNDFDAVNVRQSKAMQGQNMAELFSVRSEVRGVAASSAALSALTPLSYD
                     ANNPTQFMVGFGTYKGRQAMALGLSHFVNDRFMVKVGGTLGGNKTGHMMNVGLTWKFG
                     TSQGVPATSDKVLMEQLMQDNRQLKPRLEKLEARLNAM"
     gene            complement(1434..1949)
                     /gene="coaD"
                     /locus_tag="ACFJAG_001570"
     CDS             complement(1434..1949)
                     /gene="coaD"
                     /locus_tag="ACFJAG_001570"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004595 - pantetheine-phosphate
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HFC3980821.1"
                     /translation="MLPNTPRRAVYAGSFDPPTLGHLWMIRQAQSMFDELIVAIGINP
                     DKRNTYTAAERQDMLCAITDNFPNVRIEVFQNRFLVHYAREVDAGFIVRGIRSTSDYE
                     YERSMRHINSDLAPEISTVFLMPPREIAEVSSTMIKGLVGPEGWMETVKRYVPPAVYQ
                     KMIAEHHNNNA"
     gene            complement(2079..2762)
                     /locus_tag="ACFJAG_001571"
     CDS             complement(2079..2762)
                     /locus_tag="ACFJAG_001571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HFC3980822.1"
                     /translation="MQHDVYDYTAHTVSKNTVLQKTYRLLGFSFIPAAAGAALAANAG
                     FNFYAAFGSRWIGFAVVLAFFYGMIHFIEKNRYSNTGVTLLMVFTFGMGVLIGPVLQY
                     ALHIADGAKIVGIAAAMTAAVFLTMSALARRTRLDMNALGRFLTVGAVILMVAVVANL
                     FLGIPALALTISAGFVLFSSLMIMWQVRTVIDGGEDSYISAALTLFISLYNIFSSLLN
                     ILLSLNGDD"
     gene            complement(2919..3185)
                     /locus_tag="ACFJAG_001572"
     CDS             complement(2919..3185)
                     /locus_tag="ACFJAG_001572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative damage protection protein"
                     /protein_id="HFC3980823.1"
                     /translation="MARMVFCVKLNKEAEGMKFPPLPNELGKRIFENVSQEAWAAWTR
                     HQTMLINENRLSLADPRAREYLAQQMEQYFFGDGADAVQGYVPQ"
     gene            complement(3259..3729)
                     /gene="rlmH"
                     /locus_tag="ACFJAG_001573"
     CDS             complement(3259..3729)
                     /gene="rlmH"
                     /locus_tag="ACFJAG_001573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HFC3980824.1"
                     /translation="MNITVLAVGTKMPRWVDEAVAEYAKRFGRDAAYAFKEIKPEKRG
                     AGVNAVQGMAAEEKRILEAIPQGAFLVVLDERGKAPTSVELAEHLKSWRQNGEHVCFV
                     IGGADGMTDRLKQQARMMMRLSSLTLPHGMVRVLLTEQLYRAVSILHNHPYHRE"
     gene            complement(3782..4168)
                     /gene="rsfS"
                     /locus_tag="ACFJAG_001574"
     CDS             complement(3782..4168)
                     /gene="rsfS"
                     /locus_tag="ACFJAG_001574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0017148 - negative regulation of
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HFC3980825.1"
                     /translation="MNEQELQDLQKMVGVAVNALEDIKAKDISVLETQDKTSLFARMI
                     IASGDSTRQVKALANNVAVDLKEAGFEILSTEGDSGEWTLVDAGDLVVHVMLPAVRDF
                     YDIDTIWGGEKPSFHAGMQKPWHAAD"
     gene            complement(4227..4832)
                     /gene="nadD"
                     /locus_tag="ACFJAG_001575"
     CDS             complement(4227..4832)
                     /gene="nadD"
                     /locus_tag="ACFJAG_001575"
                     /EC_number="2.7.7.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide adenylyltransferase"
                     /protein_id="HFC3980826.1"
                     /translation="MKKIGLFGGTFDPIHNGHFHIARAFADEIGLDAVVFLPAGGPYH
                     KDAASASAADRLAMVELATAEDARFAVSDCDIVRESATYTFDTVQIFRRQFPSAQLWW
                     LMGSDSLLKLHTWKKWQLLVRETNIAVAMRQGDSLHQTPRELHAWLGNALQDGSVRIL
                     SAPMHNVSSTEIRRNLSAAGVSDGIPPAAARYIRKHGLYEK"
     gene            complement(4829..5428)
                     /locus_tag="ACFJAG_001576"
     CDS             complement(4829..5428)
                     /locus_tag="ACFJAG_001576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-class carbonic anhydrase"
                     /protein_id="HFC3980827.1"
                     /translation="MSELSEILSYNQKFVESGGYEKYFTDKYPERGLAVLSCMDARII
                     GLLPDALGLKNGDAKLIKNAGALVTHPWGSVMRSLLVAVFELKVREIMVIAHHDCGMQ
                     GLNAEEFLGRVRESRIPEDRIETLRYAGVDLDGWLTGFDNVEDSVRHTVDLIRNHPLM
                     PRHIAVHGLVIHPVTGKLTLVVDGSVSDGMDLSEGMETS"
     gene            complement(5457..6998)
                     /locus_tag="ACFJAG_001577"
     CDS             complement(5457..6998)
                     /locus_tag="ACFJAG_001577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HFC3980828.1"
                     /translation="MDGRRWAVRGAFSLLPSAFLAVMVVAPLWAVAAYDGLAWRAVLS
                     DAYMLKRLAWTVFQAAATCVLVLPLGVPVAWVLARLAFPGRALVLRLLMLPFVMPTLV
                     AGVGVLALFGADGLLWRGRQDTPYLLLYGNVFFNLPVLVRAAYQGFVQVPAARLQTAR
                     TLGAGAWRRFWDIEMPVLRPWLAGGVCLVFLYCFSGFGLALLLGGSRYATVEVEIYQL
                     VMFELDMAGASALVWLVLGVTAAAGLLYAWFGRRAVSDKAVSPVMPSPPQSVGEYVLL
                     AFSVAVLSVCCLFPLSAIVVKAWSAGESRRVLMESETWQAVWNTLRFSAAAVFAAAVL
                     GVVYAAAARRLVWMRGLVFLPFMVSPVCVSAGVLLLYPGWTASLPLLLAMYALLAYPF
                     VAKDVLSAWDALPPDYGRAAAGLGANGFQTACRITFPLLKPALRRGLTLAAATCVGEF
                     AATLFLSRPEWQTLTTLIYAYLGRAGEDNYARAMVLTLLLSAFAVCIFLLLDNGEGGK
                     RTETL"
     gene            7389..8775
                     /locus_tag="ACFJAG_001578"
                     /pseudo
     CDS             7389..8775
                     /locus_tag="ACFJAG_001578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705069.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GntP family permease"
     gene            8795..9313
                     /locus_tag="ACFJAG_001579"
     CDS             8795..9313
                     /locus_tag="ACFJAG_001579"
                     /EC_number="2.7.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gluconokinase, GntK/IdnK-type"
                     /protein_id="HFC3980829.1"
                     /translation="MTTHFVVTGVCGCGKTTAAPSLQKHLGQCPYAEGDEFHTQANRD
                     KMGAGIPLTDEDRYPWLGNLRDWMTQQAQNGADHTIVTCSALKRGYRDILRGAEGKAA
                     FIHLSPPQDINLERMMSRKGHYMKAGMLDSQLEILEELGEGEYGVKIANPGTPEAVEA
                     DILNWVASENLL"
     gene            complement(9499..10416)
                     /gene="thrB"
                     /locus_tag="ACFJAG_001580"
     CDS             complement(9499..10416)
                     /gene="thrB"
                     /locus_tag="ACFJAG_001580"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004413 - homoserine kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HFC3980830.1"
                     /translation="MSVYTSVSDDEMRGFLSGYDLGEFVSLQGIAQGITNSNYFLTTT
                     SGRYVLTVFEVLKQEELPFFLELNRHLSMKGVAVAAPVARKDGRLDSVLAGKPACLVA
                     CLKGSDTALPTAEQCFHTGAMLAKMHLAAADFPLEMENPRYDAWWTEACARLLPVLSQ
                     DDAALLCSEIDALKDNLGNHLPSGIIHADLFKDNVLLDGGQVSGFIDFYYACRGNFMY
                     DLAIAVNDWARTADNKLDEALKKAFVGGYEGVRPLSAGEKAYFPTAQRAGCIRFWVSR
                     LLDFHFPQAGEMTFIKDPNAFRNLLLSLD"
     gene            complement(10453..11181)
                     /gene="ubiG"
                     /locus_tag="ACFJAG_001581"
     CDS             complement(10453..11181)
                     /gene="ubiG"
                     /locus_tag="ACFJAG_001581"
                     /EC_number="2.1.1.222"
                     /EC_number="2.1.1.64"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0061542 - 3-demethylubiquinol-n
                     3-O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-polyprenyl-6-hydroxyphenol
                     methylase/3-demethylubiquinol 3-O-methyltransferase UbiG"
                     /protein_id="HFC3980831.1"
                     /translation="MGGKMSDKKYNVDEGEIAKFSRIADKWWDKSGEFKTLHDINPLR
                     LDYIDGHADLRGKRVLDVGCGGGILAESMARRGAAFVKGIDMAEQSLETARLHAALNN
                     VADIEYECVRVEDLAGAEPHSFDAVTCMEMMEHVPDPAAIVRACAKLVRPDGMVFFST
                     INKNPKSYLHLIVAAEYLLKFVPKGTHDWKKFISPAELARMCRQAGLDVADTKGMTYH
                     VLSQTYALCDSTDVNYMFACRPAF"
     gene            11329..12570
                     /locus_tag="ACFJAG_001582"
     CDS             11329..12570
                     /locus_tag="ACFJAG_001582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015173 - aromatic amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015801 - aromatic amino acid transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid transporter"
                     /protein_id="HFC3980832.1"
                     /translation="MSAKTPSLFGGAMIIAGTVIGAGMLANPTATSGVWFTGSLAVLL
                     YTWFSMLSSGLMILEVNTHYPHGASFDTMVKDLLGRGWNIINGIAVAFVLYLLTYAYI
                     FVGGDLTAKGIGSAVGGKISLTVGQLVFFGILAFCVWASARLVDRFTGVLIGGMVLTF
                     IWATGGLVADAKPSVLFDTQAPAGTGYWIYAATALPVCLASFGFHGNVSSLLKYFKGD
                     APKVAKSIWAGTLVALVIYVLWQTAIQGNLPRNEFAPVIAAEGQVSVLIETLSKFAQT
                     GNMDKILSLFSYMAIATSFLGVTLGLFDYIADIFKWNDSMSGRTKTAALTFLPPLISC
                     LLFPTGFVTAIGCVGLAATVWTGIIPAMLLYRSRQKFGAGKTYKVYGGLWLMVWVFLF
                     GIANIAAQVLSQMELVPVFKG"
     gene            12578..>13195
                     /locus_tag="ACFJAG_001583"
     CDS             12578..>13195
                     /locus_tag="ACFJAG_001583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HFC3980833.1"
                     /translation="MPFETRRRLQAALPQQTATVFRHTAHYPTPSRTNPAPTGAGRNH
                     KGTMMKLKIDIATNNFKHGGGTERYTLDLVKGLNRQNITPAVYATKFDHGIPEYAMIE
                     PHLVDQRRTLKKLRSFLFSSRLAQTRKNSAAKLIACHHADYADLLICGGTHLGYLHHM
                     AQKPNLLDRLAIRRNRSNYATAKLIVAHSHMMRRELVGLYGVPPER"
BASE COUNT         3110 a         3864 c         3424 g         2797 t
ORIGIN      
        1 atatttcgag ggtaacatat ctgctaatct ggtacagccc caagaaatat gcagtagcat
       61 taggatctag ttctactgcc agtggagagt attcctatgc gtcgggctat aattctgttg
      121 ccagtggaaa taaatcctat gctgcaggct atgcttctgt tgccagtgca gaaggcagtg
      181 ttgtaattgg cgattcaagg caagtaaaac cggaagcaga tcaaggggtt gcagtaggtt
      241 ctaaagcaac ggtaaagaac aaagctaaac aaagggttgc ggtaggttct gaggcaaagg
      301 taaatgcaga acgtggtatt gcgattggta aagaagccaa agcagggggc aaaacaacga
      361 acacactgtt agatggaccg gcatattatg cggacgctat tgccgtcggg tatcaagcag
      421 aggctggcaa aggtggcgcc atcgctttgg gaaaacaagc aaaagcaacg aagcaaaatg
      481 gaatggcact tggcgtagaa tcagaagctg ccggtgattt tagtaccgcc gtgggtaatg
      541 aaagcaaggc aaaggggcaa ggcggcgtag gtctcggtaa ccaatctaag gcagaggcag
      601 attttgcggt ggctgtgggg aataaggctg aggcgactaa ggaaaactca cttgtcattg
      661 gccgatatgc aagggcaaac ggaaatcatt ctgtgagttt aggatctcgt agtgaaataa
      721 aagatggtgt gagcaattct gtggcaccgg gttatggttc agtagctagt gagaataatg
      781 tcgtctctgt tgcctataaa gaaacaccac aatctacaga actttcctat agaaaaattg
      841 taggtgttga tgatggtgtc aatgattttg atgccgtcaa tgtacgccag tcgaaagcga
      901 tgcaaggaca aaatatggct gagctatttt cagtacgcag cgaagtgcgt ggtgtggcag
      961 cgagtagtgc agccctatcg gctctgactc cattatccta tgatgcaaac aatcctacgc
     1021 agtttatggt cggtttcggc acatacaaag gacgtcaagc tatggcatta ggattgtccc
     1081 atttcgtcaa tgaccgcttt atggtaaaag taggcggaac cttaggcggc aataagacgg
     1141 gacatatgat gaatgtaggc ttgacttgga aatttggaac gagccaaggt gttccggcta
     1201 caagtgataa ggtgcttatg gaacagttga tgcaagataa tcgtcaatta aagccacgat
     1261 tggagaaatt agaagcacgt ctgaatgcta tgtagccttg tggcgataac ggtttattga
     1321 gtatatcgcc aatgataaag tgcataattt tcaaaccgtt gataatatac aataaattgt
     1381 aaccaatacc tcaaacgggt ttgaacccga atatgcctga caggaacttt ctgtcaggca
     1441 ttgttgttgt gatgttctgc aatcattttt tggtacacgg ccggcggcac atatcttttg
     1501 acggtttcca tccagccctc gggcccgacc agtcctttga tcatagtgga cgacacttcg
     1561 gcgatttcgc gcggcggcat gaggaatacg gtagatattt cgggtgcgag gtcgctgttg
     1621 atatggcgca tggagcgttc gtattcataa tcggaggtgg aacggatgcc gcgcacgatg
     1681 aatcccgcat ctacctcacg ggcgtaatgc accaaaaacc ggttttgaaa cacttcaatt
     1741 ctgacgtttg ggaagttgtc ggtaatggcg cacaacatat cctgcctttc agcggcggta
     1801 taggtgttgc gtttgtcggg attgatgccg atggcgacga tgagttcgtc aaacatagat
     1861 tgcgcctgcc gtatcatcca cagatgcccc aatgtgggcg gatcgaaact gccggcataa
     1921 acggcgcggc gcggtgtatt cggtaacatt tgattcctcc cggcttcata gccggctgtg
     1981 tttttatgtg tttgcatccg tattgtatgc ccaaaacaaa atgccgtctg aaaataagtg
     2041 ctttcagacg gcatggtttg catggtgttt cgcctacatc agtcgtcgcc gtttaaggac
     2101 agcaggatgt tgagcaggct gctgaagatg ttgtaaagcg agataaacag tgtcagtgcc
     2161 gcgctgatgt aactgtcttc gccgccgtcg atgacggtgc gtacctgcca cataatcatt
     2221 aaggaactga acaagacaaa accggcggaa atggtcaggg cgagtgcggg aatacccaaa
     2281 aacagattgg caaccacggc gaccatcaga atgaccgcac ctacggtcag gaagcgtccg
     2341 agcgcgttca tatcgagccg ggttcggcgt gccaatgcgg acatcgttaa aaagacggcg
     2401 gcggtcatcg cggcggcaat gccgacgatt ttcgcaccgt cggcaatatg gagtgcgtat
     2461 tgcagcacgg ggccgatcaa tacgcccata ccgaatgtga ataccatcag cagggtaacg
     2521 ccggtattgc tgtaacggtt tttttcgatg aagtggatca taccgtagaa aaacgccaat
     2581 acgacggcaa atcctatcca gcgcgaaccg aaggcggcgt aaaaattgaa accggcattg
     2641 gcggcaagtg ccgcgcctgc ggctgccgga atgaatgaaa atccgagcag gcggtaggtt
     2701 ttctgcagga cggtgttttt agaaaccgta tgcgcggtgt agtcgtaaac gtcgtgttgc
     2761 atatcatctg ctcctgaaag cgcggttgga aataacgggg gattttaaca ttgcccaatg
     2821 tcaaaatttg tccggttgcg tgaagataaa gttgtccggc gtattttaaa ggccgtctga
     2881 agcagtttcg gacagcctgt gttcaaaacg gaaaaccgtt attgcggaac gtatccctgc
     2941 acggcatccg cgccgtcgcc gaagaaatac tgctccatct gctgagccag gtattcgcgc
     3001 gcgcgcggat cggcaaggct taagcggttt tcgttaatca gcatggtttg gtggcgcgtc
     3061 cacgccgccc atgcttcttg cgatacgttt tcaaaaatgc gtttgcccaa ttcgttgggc
     3121 agcggcggaa atttcatgcc ttcggcttct ttgttgagct tgacgcagaa taccattcgt
     3181 gccatagcgg attcctttgc tgtgttcaga aataacgggg cgattttaac cgattagggg
     3241 gtacagacaa aagccttttt attcccgatg ataaggatgg ttgtgcagga tggaaacggc
     3301 ccggtagagc tgctcggtca gaaggacgcg caccatgccg tgcggcaggg tgaggctgga
     3361 caggcgcatc atcatgcggg cttgttgttt gaggcggtcg gtcatgccgt ccgcgccgcc
     3421 gatgacgaag cagacgtgtt cgccgttttg ccgccagctt ttgaggtgtt ccgccagctc
     3481 gacggaggtc ggtgctttgc cgcgttcgtc aagaacgacg aggaacgcgc cttgcggaat
     3541 ggcttcaagg atgcgttttt cttccgccgc cataccttgg acggcattca cgcccgcgcc
     3601 gcgtttttcg ggtttgattt ctttgaatgc gtaggcggcg tcgcgtccga agcgtttggc
     3661 gtattcggcg acggcctcat caacccaacg cggcattttg gtgccgactg ccaagacggt
     3721 aatgttcaat gctttccccc ttacaggaaa tgccgtatga atattcagac ggtatcggga
     3781 atcagtctgc agcgtgccac ggcttctgca ttccggcgtg gaaactcggt ttctcgccgc
     3841 cccagatggt gtcaatgtcg tagaagtcgc gcacggcagg gagcatgacg tggacgacga
     3901 ggtctcctgc atcaaccaac gtccattcgc cgctgtctcc ttcggtactg aggatttcaa
     3961 aaccggcttc tttcaaatcg acggcaacgt tgttggccag tgctttgact tggcgcgtac
     4021 tgtcgccgct ggcgataatc attctggcaa acagcgaagt tttgtcttgc gtttcgagaa
     4081 cggaaatgtc tttggctttg atgtcttcga gggcattgac ggcgaccccg accatttttt
     4141 gcaggtcttg cagttcttgt tcgttcattg ttttcctaac gggatgtttt cagacggcat
     4201 tatagcctct ccttactgat ttgactttat ttttcataca aaccgtgttt tcggatataa
     4261 cgggcggcgg caggcgggat gccgtctgaa acaccggcgg cactcaggtt gcggcggatt
     4321 tccgttgacg acacattatg catcggggct gacaagatgc ggacgctgcc gtcctgaagg
     4381 gcattgccca gccacgcgtg cagttcgcgc ggggtttggt gcaggctgtc gccctgccgc
     4441 atggcgacgg cgatattggt ttcgcgcacg agcaactgcc attttttcca agtatgcagc
     4501 ttcagcaggc tgtcgctgcc catcagccac caaagttgcg cggacgggaa ctgccggcgg
     4561 aagatttgga cggtatcaaa agtataggtt gcactttctc ggacgatgtc gcagtcgctg
     4621 acggcaaaac gcgcgtcttc tgccgtcgcc agttcgacca tggcaaggcg gtcggcggcg
     4681 gaagcggagg cggcgtcttt gtgatacggg ccgcctgccg gcaggaaaac aaccgcgtcc
     4741 aacccgattt cgtcggcaaa ggcacgggcg atatgaaaat gcccgttgtg tatcgggtcg
     4801 aaagtgccgc cgaacagtcc gattttcttc atgatgtttc cattccttcc gataagtcca
     4861 tgccgtctga aacactgccg tccacaacca gcgtcagttt gccggtaacg ggatggatga
     4921 ccagtccgtg aacggcgata tggcgcggca tcagcggatg gttgcggata aggtccaccg
     4981 tgtggcgcac gctgtcttcg acgttgtcga aaccggtcag ccagccgtcg aggtcgacac
     5041 ctgcataacg cagggtttcg atacggtctt cgggaatccg gctttcccgg acgcgcccga
     5101 ggaattcttc ggcattcagc ccctgcatac cgcaatcgtg atgggcgatg accataatct
     5161 ctctgacctt caattcaaac acggcaacca aaaggctccg catcaccgaa ccccacgggt
     5221 gcgtaaccag cgcgccggca tttttaatca gcttggcatc gccgtttttc aaacccaacg
     5281 cgtcgggcag cagcccgata atccgcgcat ccatacagga caaaaccgcc agcccgcgtt
     5341 cggggtattt gtcggtaaag tatttttcat atcctcccga ctcgacaaac ttctgattat
     5401 aggaaaggat ttcgctcaac tcgctcattt tgccgtcctc tgaaaaaggg ttcgcattat
     5461 aacgtttccg tccgttttcc gccttcgccg ttgtccaaca gcaggaaaat gcacaccgca
     5521 aatgccgaca acagcaatgt caacaccatt gcccgcgcat aattgtcctc acccgcacgc
     5581 cccaaatagg cataaatcaa agtcgtcaac gtctgccatt ccggacgcga caggaacaag
     5641 gttgccgcaa attcgcccac acacgtcgcc gccgccaaag tcagaccgcg ccgcaacgcc
     5701 ggtttcaaga gggggaacgt gatacggcat gccgtctgaa agccgtttgc gcccaaacct
     5761 gccgccgccc tgccgtaatc cggcggcagt gcatcccagg ccgataaaac atcttttgcc
     5821 acaaacggat acgccagcag cgcatacatc gccagcagca gcggtaacga agccgtccac
     5881 cccggataaa gcagcagcac gcccgccgaa acacaaaccg gcgacaccat aaacggtaaa
     5941 aacaccagtc cgcgcatcca caccagccgc cgcgccgccg ccgcatacac cacacccaaa
     6001 accgccgccg caaacaccgc cgccgccgaa aagcgcaaag tattccacac tgcctgccac
     6061 gtttcacttt ccattaacac acgccgcgat tcgccggccg accacgcttt cacaacaatt
     6121 gccgacaaag gaaacaggca gcacacggac aacaccgcca ccgaaaatgc cagcaataca
     6181 tattccccca ccgattgagg cggcgacggc atcacggggg aaaccgcctt atccgaaacc
     6241 gcgcgcctgc cgaaccacgc atacagcaac cctgccgccg ccgttacccc caacaccagc
     6301 cacaccagcg ccgaagcccc cgccatatcg agttcgaaca taaccaactg gtaaatttcc
     6361 acttcgaccg tggcataacg gctgccgccc aacagcaatg ccagcccgaa ccccgaaaaa
     6421 caatacagga agacaaggca cacgccgccg gcaagccacg ggcgcaaaac gggcatttca
     6481 atgtcccaaa accgccgcca cgcccccgcg cccaacgtcc gtgccgtctg aagccgtgcc
     6541 gcaggcactt gcacaaaccc ctgatacgcc gccctgacca acacgggcag gttgaaaaac
     6601 acattgccgt acaacaacag atacggcgta tcctgccggc cgcgccacaa cagcccgtcc
     6661 gccccgaaca gagccagcac gcccacgccc gccaccagcg tcggcatcac aaacggcagc
     6721 atcagcaggc gcagcaccaa agcccgcccc gggaacgcca gccgcgccag cacccacgcg
     6781 acaggcacgc ccaaaggcag caccagcaca caggttgccg ccgcctgaaa caccgtccac
     6841 gccaaacgtt tgagcatata ggcatccgac agcaccgcgc gccacgccaa accgtcatac
     6901 gccgccaccg cccacaaagg cgcaacgacc attaccgcca aaaaagccga aggcagcagg
     6961 gaaaaagcac cccgtaccgc ccaacgccgt ccatccatcg ccttccccac ttgaaacact
     7021 gatgttgcga ttgtacccaa aagccccaca taccgtatat ttcaatccga ctacgtaccg
     7081 tatccgcctt cctcccgccg tctgaaatat agcggattaa caaaaatcag gacaaggcgg
     7141 cgggccgcag gcagtacaaa tggtacggaa ccggttcgcc cggtgcttca gcaccttagg
     7201 gaaccgttcc ctttgagcca aggcggggca acgccgtacc ggtttttgtt aatccactat
     7261 aaatcgttca aataaacagg aatataactt cagacaaaca acttaccgcc cgatttgtgc
     7321 tatcgttttc gcacaactta aaaaaacctg acaattttgt acttttatta cagagaaagg
     7381 ctttacaaat ggacggccgg acacagacgc tgtccgcgca aaccctgttg ggcatttcgg
     7441 cggcggcaat catcctcatt ctgattttaa tcgtcaaatt ccgcatccgc gcgctgctga
     7501 cactggtcat cgccagcctg ctgacggctt tggcaaccgg tttgcccaca ggcagcatcg
     7561 tcaacgacgt actggtcaaa aacttcggcg gcacgctcgg cggcgtggcg cttctggtcg
     7621 gtctgggcgc aatgctcgga cgtttggtag aaacatccgg cggcgcacag tcgctggcgg
     7681 acgcgctgat ccggatgttc ggcgaaaaac gcgcaccgtt cgcgccgggc gttgcctcgc
     7741 tgattttcgg cttcccgatt ttcttcgatg ccggactgat cgtcatgctg cccatcgtat
     7801 tcgccaccgc acggcgcatg aaacaggacg tactgccctt cgcgcttgcc tccgtcggcg
     7861 catttatccg tcatgcacgt cttcctgccg ccccatccgg gcccgattgc cgcttccgaa
     7921 ttttacggcg cgaacatcgg ccaggttttg attttgggtc tgccgaccgc ctttatcaca
     7981 tggtatttca gcggctatat gctcggcaaa gtgttggggc gcgccatcca tgttcccgtt
     8041 cccgaactgc tcagcggcgg cacgcgagac agcgacccgc cgaaagaacc tgccaaagca
     8101 ggaacggtcg tcgccgtcat gctgattccc atgctgctga ttttcctgaa taccggcgta
     8161 tcggccctca tcagcgaaaa actcgtaagt gcggacgaaa cttgggttca gacggcaaaa
     8221 atgatcggtt cgacacctgt cgcccttttg atttccgtat tggccgcact gttggtcttg
     8281 ggacgcaaac gcggcgaaag cggcagcacg ttggaaaaaa ccgtggacgg cgcactcgcc
     8341 cccgtctgtc ccgtgattct gattaccggc gcgggcggta tgttcggcgg cgttttgcgc
     8401 gcttccggca tcggcaaggc actcgccgac agcatggcgg atttgggcat tcccgtcctt
     8461 ttgggctgct tccttgccgc cttggcactg cgtatcgcgc aaggttcggc aaccgtcgcc
     8521 ctgaccacag ccgccgcgct gatggctcct gccgttgccg ccgccggctt taccgactgg
     8581 cagctcgcct gtatcgtatt ggcaacggcg gcgggttcgg tcggttgcag ccacttcaac
     8641 gactccggct tctggctggt cggccgcctc ttggatatgg acgtaccgac cacgctgaaa
     8701 acctggacgg tcaaccaaac cctcatcgca ttcatcggct ttgccttgtc cgcactgctg
     8761 tttgccatcg tctgacagac ggaaaggata gtaaatgact acgcattttg tcgttacggg
     8821 cgtatgcggc tgcggcaaga ccaccgccgc gccgtccctg cagaaacacc tcggtcaatg
     8881 tccctatgcc gaaggcgacg agttccacac ccaagccaac cgcgacaaga tgggcgcggg
     8941 tattccgctg accgatgaag accgctatcc gtggttgggc aatctgcgcg actggatgac
     9001 gcaacaggcg caaaacggcg cggaccacac catcgtaacc tgttccgccc tcaaacgcgg
     9061 ctaccgcgac attctgcgcg gagccgaagg caaagccgcc ttcatccacc tcagtccgcc
     9121 gcaagacatc aacctcgaac gcatgatgtc gcgcaaaggg cactacatga aagcagggat
     9181 gctcgattcg caactggaaa tcctcgagga actgggcgaa ggcgaatacg gggtcaaaat
     9241 cgccaacccc ggcacgcccg aagcggtcga agccgatatt ctgaactggg ttgcctcgga
     9301 aaacctgctt tgaagcaata tgccgtctga agcccggcac aggatgggtt tcagacggca
     9361 taaacatcgg gaacagaatg aattacattg atttaaaatg gaaaataccc ggctatcgtc
     9421 tcattttcgt tttaatcagc cataaaaatg ccgtccgaaa ccctttcaga cggcatttct
     9481 gtcaaacgcc ggacgcactc aatccaaact caacagcagg ttgcggaacg cgttcgggtc
     9541 tttgataaac gtcatctcgc ccgcctgcgg aaaatgaaaa tccaacaggc gcgacaccca
     9601 aaaacggatg cagccggcgc gttgggcggt cgggaaatac gccttttctc cggcactcaa
     9661 ggggcgcacg ccctcataac cgccgacaaa cgcctttttc aacgcctcat ccaacttatt
     9721 gtccgccgtc cttgcccaat cgttgaccgc aatcgccaag tcatacataa aattgccccg
     9781 gcaggcataa tagaaatcga tgaagcccga tacctgaccg ccgtcaagca acacattgtc
     9841 tttaaacagg tcggcgtgga tgatgcccga aggcagatgg ttgccgagat tgtccttcag
     9901 cgcatcgatt tcggaacaca gcagcgcggc atcgtcttgc gacaggacgg gcagcagccg
     9961 ggcgcacgct tccgtccacc acgcatcgta acgcgggttt tccatttcca aagggaaatc
    10021 ggcggcggca aggtgcattt tcgccaacat cgcaccggta tggaaacact gctcagccgt
    10081 cggcagcgcg gtatccgaac ctttcaggca ggcaaccagg caggccggct tgcccgccaa
    10141 aacggaatcg agccggccgt ctttgcgcgc aaccggcgcg gcaaccgcca cgcccttcat
    10201 actcaaatgc cggttaagct ccagaaaaaa cggcagctct tcctgtttca acacttcaaa
    10261 cacggtcagc acataacgtc ccgaagtcgt cgtcagaaaa taattgctgt tggtaatccc
    10321 ctgcgcaatg ccctgcaggg aaacaaattc ccccaaatcg taaccgctca ggaagccgcg
    10381 catttcatca tcggaaacac tggtatagac agacatatca acttacttgc tcaaaaacgg
    10441 gcaaacccgc cgtcagaacg ccggacggca ggcaaacata taattcacat cggtcgaatc
    10501 gcacagggca taagtttgcg acaacacatg gtaagtcata cccttcgtat ccgccacatc
    10561 caagcccgcc tgacggcaca tccgcgccag ctcggcaggc gagatgaatt ttttccagtc
    10621 gtgcgtgcct ttggggacaa acttcaacag atattccgcc gccacaatca gatgcaggta
    10681 cgatttcggg tttttattga tggtggaaaa aaacaccata ccgtccggcc tgaccagctt
    10741 ggcacaggca cgcacgatgg cggcgggatc ggggacgtgt tccatcattt ccatacacgt
    10801 taccgcatcg aacgagtgcg gttccgcccc ggcaaggtct tccacgcgga cacattcgta
    10861 ttcgatatcg gcgacattgt tcaaagccgc gtgcaggcgg gcggtttcca acgactgctc
    10921 cgccatgtcg atacctttga caaacgccgc gccgcgccgc gccatgcttt ccgcgaggat
    10981 gccgccgccg cagcctacat ctaaaacccg tttgccgcgc aaatccgcgt gtccgtcgat
    11041 ataatccagc cgcagcggat tgatgtcgtg caaggttttg aactcgcccg acttgtccca
    11101 ccatttgtcg gcaatccggc tgaacttggc gatttccccc tcatcgacat tatatttttt
    11161 gtcggacatt ttccctccca tctgacgaac cgccccactc aaaaacccaa gattatacta
    11221 tgggacgcaa tgccgtctga aagccttttc gggcggcgcg gcgcaaatac cttacaaacc
    11281 cttacacttt acggcataat gcaggctgtt tttcccgagg aggcttatat gtccgccaaa
    11341 actccgtcgc tcttcggcgg cgcgatgatt atcgccggca cggtcatcgg cgcaggtatg
    11401 ctcgccaacc cgaccgccac atccggcgta tggtttaccg gctcgctggc cgtgttgctg
    11461 tacacctggt tttctatgct ttccagcggc ctgatgattt tggaagtcaa cacccattat
    11521 ccgcacggcg caagtttcga cacgatggtc aaagacctgc tcggacgcgg ctggaacatc
    11581 atcaacggca tcgccgtcgc cttcgtttta tacctgctca cctacgccta catcttcgtc
    11641 ggcggcgacc tgaccgccaa aggcatcggc agcgcagtag gcggcaaaat ttcgctcacc
    11701 gtcggacaac tcgtcttctt cggcatcctc gccttttgcg tatgggcatc cgcacgcttg
    11761 gtcgaccgct ttaccggcgt cctcatcggc ggcatggtat taacctttat ttgggcaacc
    11821 ggcggcctgg ttgccgatgc caaaccgtcc gtcctcttcg acacccaagc ccccgccggc
    11881 accggctact ggatttacgc cgccaccgcc ctgcccgtct gcctcgcttc cttcggcttc
    11941 cacggcaacg tttccagcct gctcaaatac tttaaaggcg acgcgcccaa agtggcgaaa
    12001 tccatctggg caggtacgtt ggttgccttg gtaatttacg tcctctggca aaccgccatc
    12061 caaggcaacc tgccgcgcaa cgagttcgcc cccgtgattg ccgccgaagg gcaagtctcc
    12121 gtcctgattg aaaccctgtc caaattcgcc caaaccggca atatggataa aatattgtcc
    12181 ctattttcct acatggcaat cgccacctcg tttttaggcg taaccttagg cctgttcgac
    12241 tacatcgccg acatcttcaa atggaacgac agcatgtccg gccgcaccaa aaccgccgcg
    12301 ctgaccttcc tgccgcccct gatttcctgc ctgctcttcc ccaccggctt cgttaccgcc
    12361 atcggctgcg tcggcctggc ggcaaccgtc tggacaggca tcatccccgc catgctgctc
    12421 taccgttcgc gccaaaaatt cggcgcaggc aaaacctata aagtttacgg cggcttgtgg
    12481 ctgatggttt gggtcttcct tttcggcatc gccaacatcg ccgcacaggt attgagccaa
    12541 atggaactcg tccccgtatt taaaggataa aggcaaaatg ccgtttgaaa cccgccggcg
    12601 gcttcaggcg gcattgccgc aacaaacggc aaccgtattc cggcacacag cgcattaccc
    12661 taccccctca cgcacaaatc ccgccccgac aggcgcggga cgcaaccata aaggaacaat
    12721 gatgaagctc aaaatagaca ttgcaaccaa caacttcaaa cacggcggcg gcacggaacg
    12781 ctacacattg gatttggtaa agggtctgaa cagacaaaac atcacaccgg ccgtttatgc
    12841 gacgaaattt gatcacggca ttcccgaata cgccatgatc gaaccccatc ttgtcgatca
    12901 acgccggacg ctgaaaaaac tacgctcgtt cctcttttca agccggctcg ctcaaaccag
    12961 aaaaaacagt gccgccaaac tgattgcctg ccaccacgcc gattacgccg acctcctcat
    13021 ctgcggcggc acgcacttgg gctacctgca ccatatggcg caaaaaccga acctgctcga
    13081 ccgcctcgcc atacgccgca accgcagcaa ctacgccacc gccaaactga ttgtggcgca
    13141 ttcccatatg atgcggcgcg aactggtcgg actatacggc gttccccccg aaaga
//
LOCUS       DAXFZM010000067        13093 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.067, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000067 DAXFZM010000000
VERSION     DAXFZM010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13093)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13093)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13093
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.067"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            196..1539
                     /locus_tag="ACFJAG_001584"
     CDS             196..1539
                     /locus_tag="ACFJAG_001584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)-translocating NADH-quinone reductase
                     subunit A"
                     /protein_id="HFC3980834.1"
                     /translation="MIKIKKGLNLPIAGRPEQVIYDGPAITEVALLGEEYVGMRPSMK
                     IKEGEAVKKGQVLFEDKKNPGVVFTAPASGKIAAIHRGEKRVLQSVVIAVEGNDEIEF
                     ERYVPEALAKLSSEKVRRNLIQSGLWTALRTRPFSKIPAVDAEPFAIFVNAMDTNPLA
                     ADPTVIIKEAAEDFKRGLLVLSRLTERKIHVCKAAGADVPSENAANIETHEFGGPHPA
                     GLSGTHIHFIEPVGANKTVWTINYQDVIAIGRLFVTGRLNTERVVALGGLQVNKPRLL
                     RTVLGAKVSQLTAGELVDADNRVISGSVLNGAIAQGAHDYLGRYHNQISVIEEGRSKE
                     LFGWVAPQPDKYSITRTTLGHFLKNKLFKFTTAVNGGDRAMVPIGTYERVMPLDILPT
                     LLLRDLIVGDTDSAQALGCLELDEEDLALCSFVCPGKYEYGPLLRKVLETIEKEG"
     gene            1542..2774
                     /locus_tag="ACFJAG_001585"
     CDS             1542..2774
                     /locus_tag="ACFJAG_001585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_process: GO:0022904 - respiratory electron transport
                     chain [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit B"
                     /protein_id="HFC3980835.1"
                     /translation="MGLKHFLEKIEPHFLPGGKHEKWYALYEAAATIFYTSGAVTRKA
                     AHVRDALDSKRMMILVWLALFPAMFYGMYNVGAQAFGALTPDLLQQSIANDWHYALAN
                     ALGINMSPEAGVLGKMLFGAIYFLPIYATVFIVGGFWEVLFASVRKHEINEGFFVTSI
                     LFALIVPPTLPLWQAALGISFGVVVAKEVFGGTGKNFMNPALAGRAFLFFAYPANLSG
                     DAVWTAVDGYSGATALAQWAAHGADGLKNAVTGQTITWMDAFIGKLPGSIGEVSTLAL
                     LIGGAFIVFARIASWRIIAGVMIGMIAMSSLFNFIGSDTNAMFAMPWYWHLVVGGFAI
                     GMLFMATDPVSASFTNVGKWWYGALIGVMCVLIRVANPAYPEGMMLAILFANLFAPIF
                     DYFVAQANIKRRKARSNG"
     gene            2767..3543
                     /locus_tag="ACFJAG_001586"
     CDS             2767..3543
                     /locus_tag="ACFJAG_001586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)-translocating NADH-quinone reductase
                     subunit C"
                     /protein_id="HFC3980836.1"
                     /translation="MAKKFDKDSFSGTLIVVLAVSLICSVIVAGAVVGLKPIQEKQKL
                     QDKQGYILSVAGLMDKDTDIGKTFAERIEQRVVDLATGEYVKDAPKDFSARIAGKDPA
                     QSIRIKPEDDLAGIKSRAKYTEVYLVKGEDGKIGQIILPMHGNGLWSVMYGFVAIRPD
                     GNTINGITYYEQGETPGLGGEIGNPLWQQKFVGKKLFDGQGKLALHVGKGAGSDKEHG
                     VDALSGASLTSKGVQGSFAYWFGENGYIPYLNKLKSAGVQ"
     gene            3543..4169
                     /locus_tag="ACFJAG_001587"
     CDS             3543..4169
                     /locus_tag="ACFJAG_001587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit D"
                     /protein_id="HFC3980837.1"
                     /translation="MADMKRLKHLMFSPFIDNNPIALQVLGICSALAVTTKLQTAIVM
                     GISVALVTGFSSFFISLVRNYIPNSIRIIVQMAIIASLVTLVDQLLQAFAYELSKQLS
                     VFVGLIITNCIVMGRAEAFAMKEPPLESLIDGIGNGAGYGMMLLVVATVRELIGSGKL
                     LGYTVFQTVQDGGWYQTNGLFLLAPSAFFIIGFLIWGLRTWKPEQAEE"
     gene            4173..4766
                     /gene="nqrE"
                     /locus_tag="ACFJAG_001588"
     CDS             4173..4766
                     /gene="nqrE"
                     /locus_tag="ACFJAG_001588"
                     /EC_number="7.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit E"
                     /protein_id="HFC3980838.1"
                     /translation="MEHYLSLFIKSVFIENMALSFFLGMCTFLAVSKKVSTAFGLGVA
                     VIFVLGLSVPANQLVYSLLKDGAIVEGVDLTFLKFITFIGVIAALVQILEMFLDKFVP
                     ALYNALGIYLPLITVNCAIFGAVSFMAQREYDFGESVVYGFGAGLGWMLAIVALAGIT
                     EKMKYSDAPKGLKGLGITFIAAGLMAMAFMSFSGIQL"
     gene            4780..5997
                     /gene="nqrF"
                     /locus_tag="ACFJAG_001589"
     CDS             4780..5997
                     /gene="nqrF"
                     /locus_tag="ACFJAG_001589"
                     /EC_number="7.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit F"
                     /protein_id="HFC3980839.1"
                     /translation="MEIILGIVMFTVIVLALALMILFAKSKLVSEGDITIKVNDEKEL
                     TMPAGGKLLGALASQGIFVPSACGGGGSCGQCRVVVKSGGGDILPTELSHISKREARE
                     GCRLSCQVNVKTDMDIEVPEEVFGVKKWECTVISNDNKATFIKELKLAIPEGEEVPFR
                     AGGYIQIEAPPHTVAYKDFDIPKEYHEDWDKYNLWQYVSKVNEPILRAYSMASYPEEK
                     GIIMLNVRIATSPPRVPDAPPGQMSSYIWSLKPGDKVTISGPFGEFFAKDTDAEMVFI
                     GGGAGMAPMRSHIFDQLKRLHSKRKITFWYGARSKREMFYVEDFDQLAAEFPNFTWHV
                     ALSDPLPEDNWDGYTGFIHNVVYENHLKNHEAPEDCEFYMCGPPIMNQSVIKMLKDLG
                     VEDENILLDDFGG"
     gene            6514..7569
                     /locus_tag="ACFJAG_001590"
     CDS             6514..7569
                     /locus_tag="ACFJAG_001590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0017013 - protein flavinylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HFC3980840.1"
                     /translation="MPSETRLPNLIRALIFALGFIFLNACSEQTAQTVTLQGETMGTT
                     YTVKYLSNNRDKLPSPAKIQKRIDDALKEVNRQMSTYQTDSEISRFNQHTAGKPLRIS
                     SDFAHVTAEAVRLNRLTHGALDVTVGPLVNLWGFGPDKSVTREPSPEQIKQAASYTGI
                     DKIILQQGKDYASLSKTHPKAYLDLSSIAKGFGVDKVAGELEKYGIQNYLVEIGGELH
                     GKGKNAHGEPWRIGIEQPNIIQGGNTQIIVPLNNRSLATSGDYRIFHVDKNGKRLSHI
                     INPNNKRPISHNLASISVVSDSAMTADGLSTGLFVLGQTEALRLAEQEKLAVFLIVRD
                     KDGYRTAMSSEFAKLLR"
     gene            7595..7810
                     /gene="nqrM"
                     /locus_tag="ACFJAG_001591"
     CDS             7595..7810
                     /gene="nqrM"
                     /locus_tag="ACFJAG_001591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Na+)-NQR maturation NqrM"
                     /protein_id="HFC3980841.1"
                     /translation="MKTLLLTFGIFLTVIIGMAVGYIFSKRTIKGSCGGITALGMKKM
                     CDCDTPCDTLQKKLDEEKQAGGIRVDR"
     gene            complement(7934..8512)
                     /gene="grpE"
                     /locus_tag="ACFJAG_001592"
     CDS             complement(7934..8512)
                     /gene="grpE"
                     /locus_tag="ACFJAG_001592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000774 - adenyl-nucleotide exchange
                     factor activity [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HFC3980842.1"
                     /translation="MSEQTQQQNSEEAVENVEAVETVETVGNADGVQEQAAAEPAYED
                     LQARIAELEAQLKDEQLRALANEQNLRRRHQQEIADTHKFAGQKFAVEMLPVKDYLEM
                     ALLDQSGNFDALKMGVQMTLNELQKAFDATQIKEINPKAGDKLDPNIHQAMQAVASEQ
                     EPNTVVGVMKKGYTLSDRVLRPAMVTVARKEA"
     gene            8695..9513
                     /gene="cysE"
                     /locus_tag="ACFJAG_001593"
     CDS             8695..9513
                     /gene="cysE"
                     /locus_tag="ACFJAG_001593"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0009001 - serine O-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HFC3980843.1"
                     /translation="MKKNHLNTTGFDLWHTIREETAAAAAAEPMLASFLHQTVLRHES
                     LGSVLAYHLSSKLGSPIMDVRALFEIYQQALGSDTQISKCVEADLKAIYERDPACDEY
                     SLPLLYFKGFHAIQAHRINHRLYLDGRKTLAYFLQNRMSEVFGVDIHPAARLGYGLML
                     DHATGFVAGETAVLGNNISILHGVTLGGSGKEGGDRHPKIGDGVMIGANASILGNIRI
                     GSNAKIGAGSVVVSDVPPSITVVGVPAKPVARSLKTPSADMDQNIQFAEIDFMI"
     gene            complement(9717..11228)
                     /gene="ubiB"
                     /locus_tag="ACFJAG_001594"
     CDS             complement(9717..11228)
                     /gene="ubiB"
                     /locus_tag="ACFJAG_001594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone biosynthesis regulatory protein
                     kinase UbiB"
                     /protein_id="HFC3980844.1"
                     /translation="MKWLKRLTVIVGTFYRYRLAGLCVSLMGSGWICALLKMMPQSSK
                     LKNEPPAVRLRLALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLS
                     REQIEKSLGQPIEKLYAEFETEPVASASIAQVHKARLHSGERVAVKVLRPNLLPLIEQ
                     DLSLMRFGAAWVERLFSDGKRLKPREVVAEFDKYLHDELDLMREAANAGQLGRNFQNS
                     NMLIVPKVFYDYCTSDVLTIEWMDGTPVSDIAKLKADGIDLHKLADYGVEIFFTQVFR
                     DGFFHADMHPGNILVAADNRYIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATA
                     HVESGWVPADTRAEELEAAVRAVCEPVFNKPISQISFGLVLMRLFEVSRRFNVEIQPQ
                     LVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVKWMNGQVGPKALWRNLKNEAPDWAQ
                     IIPSLPRKINALVDEARRQEMRDAYIHLVKVQQRQSLWLAAIAVVLLLILLLK"
     gene            complement(11263..11720)
                     /locus_tag="ACFJAG_001595"
                     /pseudo
     CDS             complement(11263..11720)
                     /locus_tag="ACFJAG_001595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222884.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
     gene            complement(11717..11863)
                     /locus_tag="ACFJAG_001596"
     CDS             complement(11717..11863)
                     /locus_tag="ACFJAG_001596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980845.1"
                     /translation="MPSERSDGIFTFGKYIIGMNLHIIRLLEDESGFPKGTGGTVSGV
                     FVPL"
     gene            complement(11880..12218)
                     /gene="erpA"
                     /locus_tag="ACFJAG_001597"
     CDS             complement(11880..12218)
                     /gene="erpA"
                     /locus_tag="ACFJAG_001597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster insertion protein ErpA"
                     /protein_id="HFC3980846.1"
                     /translation="MSDESPIIFTDSCCAKVADLIAEENNPDLKLRVFVNGGGCSGFQ
                     YGFTFDEIKNDDDFEIEKNGLVFLVDPMSYQYLVGAEIDYTESLQGSQFVIRNPNAET
                     TCGCGSSFSV"
     gene            complement(12351..13037)
                     /locus_tag="ACFJAG_001598"
     CDS             complement(12351..13037)
                     /locus_tag="ACFJAG_001598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HFC3980847.1"
                     /translation="METFKDRLVFLWKSEARQAKIASDIEMTIAGFSRIWNEGGLPKS
                     ETLKKIKQLKGCSIDWLLTGEGNPFPDEAPKKSLAYDTLGNEVDTDEFVFVPRYDIRA
                     AAGYGQFVGHEEPVFTMAFRRHWIENYVTRDTKNLSVISVKGDSMEGVLNDGDSILVN
                     HGENTPRDGLYVLRINENLLVKRLQIVPGGIINVISANEAYPAFEINLNDLTDDVEII
                     GRVEWFGRTV"
BASE COUNT         3247 a         3665 c         3125 g         3056 t
ORIGIN      
        1 tcaaatcaat atcccccttc cgacaattaa aaacggcttc cgcaaggaaa aaagcggcaa
       61 atctgacaaa caggtacaat tcctgataaa atctaacact ttgctacatt aatttattca
      121 atgcttttga tgccacgcga cacggtatca aaaacacgcc gtttttacct taaccatcac
      181 aagtaatgca aatctatgat taaaatcaaa aaaggtctaa atctgcccat cgcgggcaga
      241 ccggagcaag tcatttatga cggcccggcc attaccgaag tcgcgttgct tggcgaagaa
      301 tatgtcggca tgcgcccctc gatgaaaatc aaggaaggtg aagccgtcaa aaaaggccaa
      361 gtgctgtttg aagacaaaaa gaatccgggc gtagtattta ctgcgccggc ttcaggcaaa
      421 atcgccgcta ttcaccgtgg cgaaaagcgc gtacttcagt cagtcgtgat tgccgttgaa
      481 ggcaacgacg aaatcgagtt cgaacgctac gtacctgaag cgctggcaaa attgagcagc
      541 gaaaaagtgc gccgcaacct gattcaatca ggcttatgga ctgcgcttcg cacccgtccg
      601 ttcagcaaaa tccctgccgt agatgccgag ccgttcgcca tcttcgtcaa tgcgatggac
      661 accaatccgc tggctgccga ccctacggtc atcatcaaag aagccgccga agacttcaaa
      721 cgcggcctgt tggtattgag ccgcctgacc gaacgtaaaa tccatgtgtg taaagcagca
      781 ggcgcagacg tgccgtctga aaatgctgcc aatatcgaaa cacatgaatt tggcggcccg
      841 catcctgccg gcttgagtgg cacgcacatt catttcatcg agccagtcgg cgcgaataaa
      901 accgtgtgga ccatcaatta tcaagacgtg attgccatcg gacgtttgtt cgtaacaggc
      961 cgtctgaata ccgagcgcgt ggttgccttg ggcggcctgc aagtcaacaa accgcgcctc
     1021 ttgcgtaccg ttttgggtgc gaaggtgtct caacttaccg ccggcgaatt ggttgacgcg
     1081 gacaaccgcg tgatttccgg ttcggtattg aacggtgcga ttgcacaagg cgcgcatgat
     1141 tatttgggac gctaccacaa tcagatttcc gttatcgaag aaggccgcag caaagagctg
     1201 ttcggctggg ttgcgccgca gccggacaaa tactccatca cgcgcaccac tctcggccat
     1261 ttcctaaaaa acaaactctt caagttcacg acagccgtca acggcggcga ccgcgccatg
     1321 gtaccgatcg gcacttatga gcgcgtaatg ccgttggaca tcctgcctac cttgcttttg
     1381 cgcgatttaa tcgtcggcga taccgacagc gcgcaggctt tgggttgctt ggaattggac
     1441 gaagaagacc tcgctttgtg cagcttcgtc tgcccgggca aatacgaata cggcccgctg
     1501 ttgcgcaaag tgctggaaac cattgagaag gaaggctgat tatgggctta aaacattttc
     1561 tggaaaaaat cgaaccgcac ttcctgccgg gcggcaaaca tgaaaaatgg tatgccctct
     1621 atgaagctgc ggcgacgatt ttctatacat ccggcgcggt aacgcgcaaa gcggcgcacg
     1681 tccgcgacgc gctcgactcc aaacgcatga tgattttggt gtggctggct ttgttccccg
     1741 ccatgtttta cggcatgtac aacgtcggcg cacaggcatt cggtgcctta acgcccgatt
     1801 tgctgcaaca aagcatcgcc aacgactggc attacgccct tgccaacgct ttgggcatca
     1861 atatgtcgcc tgaagcgggc gtgttgggca aaatgctgtt cggcgcgatt tacttcctgc
     1921 cgatttacgc gaccgtattt attgtgggcg gcttctggga agtcttgttc gcatccgtac
     1981 gcaaacacga aatcaacgaa ggtttcttcg ttacttcgat tctgtttgcc ttaatcgttc
     2041 cgcccacgct gccgctgtgg caggcggctt tgggtatttc tttcggcgtt gtggttgcga
     2101 aagaagtatt cggcggtaca ggtaaaaact tcatgaaccc tgcgctggca ggccgcgcct
     2161 tcctgttctt cgcctacccc gccaacttga gcggcgatgc ggtttggacg gcggttgacg
     2221 gctattccgg cgcaaccgcg ctggcgcaat gggcggcaca cggtgcagac ggcctgaaaa
     2281 acgccgtaac cggtcaaacc atcacttgga tggacgcgtt tatcggcaaa ctgcccggct
     2341 ccatcggcga agtctccact ttggcactct taatcggcgg cgcgtttatc gtgtttgccc
     2401 gcatcgcttc ttggcgcatt attgccggcg tgatgatcgg tatgattgcg atgtcttcgc
     2461 tgtttaactt catcggttct gacaccaacg ctatgtttgc tatgccttgg tactggcact
     2521 tggtggtcgg cggcttcgcc atcggtatgc tgtttatggc gaccgacccc gtttccgctt
     2581 cctttaccaa tgtcggcaaa tggtggtacg gcgcgcttat cggcgtaatg tgcgtgttaa
     2641 tccgcgtggc caatccggct taccccgaag gcatgatgtt ggcgattctg tttgccaacc
     2701 tgtttgcccc gattttcgac tatttcgtcg cacaagcgaa catcaaacgc agaaaggcgc
     2761 gcagcaatgg ctaagaaatt cgataaagac agcttcagcg gcacgctgat tgtcgtgttg
     2821 gcggtcagcc tgatttgctc ggtcatcgtt gccggtgcgg tcgtcggctt gaaacccatc
     2881 caagaaaaac aaaaactcca agacaaacaa ggctatattt tgagcgtggc cggtttgatg
     2941 gataaggaca ccgacatcgg taaaaccttt gccgagcgta tcgagcaacg cgtggtcgat
     3001 ttggcgaccg gcgaatatgt gaaagacgcg ccgaaagact tcagcgcgcg catcgcaggc
     3061 aaagaccccg cgcaaagcat ccgcatcaaa cctgaagacg atttggcagg catcaaaagc
     3121 cgcgccaaat acaccgaggt ttatttggta aaaggcgaag acggcaaaat cgggcaaatc
     3181 atcctgccga tgcacggcaa cggtttgtgg tcggtgatgt acggttttgt cgccatccga
     3241 cccgacggca acaccatcaa cggcattacc tattacgagc aaggcgaaac cccgggcttg
     3301 ggcggcgaaa tcggcaaccc tctgtggcag caaaaattcg tcggcaaaaa attgtttgac
     3361 ggacaaggca aactcgccct gcacgtgggc aaaggcgcgg gttcggacaa agaacacggc
     3421 gtagacgccc tctccggcgc gtcgctgact tccaaaggcg tgcaaggttc gttcgcctac
     3481 tggttcggcg aaaacggcta tatcccctac ctgaacaaat tgaaatcagc aggagtgcaa
     3541 taatggctga tatgaaacgc ttgaaacatt tgatgttctc accctttatc gacaacaacc
     3601 cgattgcctt gcaggttttg ggtatttgtt cggctttggc ggttaccacc aaacttcaga
     3661 cggccatcgt aatgggtatt tccgtagctt tggtaaccgg tttttccagc ttcttcattt
     3721 cgctggtgcg caactacatc cccaacagca tccgcatcat cgtgcaaatg gcgattatcg
     3781 cgtcgctggt tacgctggtc gaccaactgc ttcaggcatt tgcctacgaa ttgtccaagc
     3841 agctttccgt attcgtcggc ctgattatta ccaactgtat agtgatgggc cgtgccgaag
     3901 catttgcgat gaaagagccg ccgctggaaa gcctgatcga cggcatcggc aacggtgcgg
     3961 gctacgggat gatgctgctt gtcgtcgcca ccgtccgcga actgatcggc tcaggcaaac
     4021 ttttaggtta taccgtcttt caaaccgtac aggacggcgg ctggtatcag accaacggcc
     4081 tcttcctact cgcccccagc gcgttcttca tcatcggctt tttgatttgg ggactgcgta
     4141 cttggaaacc cgaacaggcg gaggaataag ctatggaaca ctatttgagc ctcttcatca
     4201 aatccgtctt cattgaaaat atggcgctat ccttcttttt gggtatgtgt acgtttttgg
     4261 cggtatccaa aaaagtatcc accgcattcg gtttgggtgt ggcggtaatt ttcgtactcg
     4321 ggctgtccgt ccccgccaac caattggttt actcgctgct caaagacggc gcgattgtcg
     4381 aaggcgtgga tttgaccttt ttgaaattca tcacctttat cggcgtgatt gccgctttgg
     4441 tgcagatttt ggaaatgttc ttggacaaat tcgtccccgc cctctataac gcgctgggca
     4501 tctacctgcc tctgattacc gtaaactgcg cgattttcgg cgccgtatcg tttatggcgc
     4561 aacgcgaata cgacttcggc gagtccgtcg tgtacggctt cggcgcgggt ttgggctgga
     4621 tgttggcgat tgtcgctttg gcgggcatta ccgaaaaaat gaaatattcg gacgctccca
     4681 aaggtctcaa aggcttgggc attaccttta tcgccgccgg cctgatggca atggcgttta
     4741 tgtcgttctc cggcatccag ttataagaaa gggaccggta tggagattat tttaggtatc
     4801 gtgatgttta ccgtcatcgt cttagctttg gcactgatga ttctgtttgc caaatccaag
     4861 ttggtcagcg aaggcgacat caccatcaaa gtcaatgatg aaaaagaact gactatgccc
     4921 gccggcggca aactcttggg cgcgcttgcc agccaaggca tctttgtccc ctccgcctgc
     4981 ggtggcggcg gttcgtgcgg acaatgccgc gttgtcgtga aaagcggcgg cggcgacatt
     5041 ctgccgaccg agctgtccca catcagcaaa cgcgaagcac gcgaaggctg ccgtttgtcc
     5101 tgccaagtca atgtcaaaac cgacatggac atcgaagtac ccgaagaagt gttcggcgtg
     5161 aaaaaatggg aatgcaccgt catttccaac gacaacaaag caacgttcat taaagaactc
     5221 aagcttgcca ttcccgaagg cgaagaagtt cctttccgcg ccggcggcta cattcaaatc
     5281 gaagccccgc cgcacaccgt tgcctacaaa gacttcgaca ttcccaagga atatcacgaa
     5341 gactgggaca aatacaatct gtggcaatac gtttccaaag tgaacgagcc gattttgcgc
     5401 gcctactcta tggcttcgta tcctgaagaa aaaggcatca ttatgctgaa cgtgcgtatc
     5461 gccacgtctc ccccgcgcgt acccgatgcg cctccgggac aaatgtcgtc ctacatctgg
     5521 tcgctcaaac ccggcgacaa agttacgatt tccggcccgt tcggcgaatt tttcgccaaa
     5581 gacaccgatg ccgaaatggt atttatcggc ggcggtgcgg gtatggcccc gatgcgttcc
     5641 cacattttcg accagttgaa acgtttgcac tccaaacgga aaatcacctt ctggtacggc
     5701 gcacgctcca aacgcgaaat gttctatgtc gaagacttcg accaactcgc ggcagaattc
     5761 ccgaacttca cttggcacgt cgccctgtcc gacccattgc ctgaagacaa ctgggacggc
     5821 tacacgggct tcatccacaa cgtggtttac gaaaaccacc tgaaaaacca cgaagcaccg
     5881 gaagactgcg aattttatat gtgcggcccg ccgattatga accagtccgt catcaaaatg
     5941 ctcaaagact tgggcgtgga agacgaaaac atcctcttgg acgatttcgg cggttaaata
     6001 ttcggcttca aacacaaaag gaagaaaccc cggtttcttc cttttttatc cgatgccgtc
     6061 cgaacaccct tcagacggca tccgcccata cccgtatcaa tatcgttttt ttaccctgcg
     6121 gcggatgtac ggttaaatat tttgacgaaa aaacaaagaa gtatacttct ttttagttat
     6181 ggttgattcc ataactaaaa aagtatcgat caacccattt tgcgaggtac ggataatgtc
     6241 tgacagcttt gaaaacagcc ccgaatacga tgattggatt gaatcgggcg gtcgtgatga
     6301 agattacgaa tactactaca acaaatggca acgcaggacg cgctgaccat taaaccctga
     6361 caaaccggtt tgtaaaacac cggtttgttt tttattaccg ccacccaaac gacgggcgat
     6421 gccgcccgaa cgcccttcaa acggcatcgg catagaaaca taccggccgt tttgcgatat
     6481 aattcaagcc atttgccaaa accgtcaaac actatgccgt ctgaaacacg cctgccgaac
     6541 cttatccgcg ccttgatatt tgccctgggt ttcatcttcc tgaacgcctg ttcggaacaa
     6601 accgcgcaaa ccgttaccct gcaaggcgaa acgatgggta cgacctatac cgtcaaatac
     6661 ctttcaaata atcgggacaa actcccctcc cctgccaaaa tacaaaagcg cattgatgat
     6721 gcgcttaaag aagtcaaccg gcagatgtcc acctaccaga ccgattccga aatcagccgg
     6781 ttcaaccaac acacagccgg caagcccctc cgcatttcaa gcgatttcgc acacgttacc
     6841 gccgaagccg tccgcctgaa ccgcctgact cacggcgcac tggacgtaac cgtcggccct
     6901 ttggtcaacc tttgggggtt cggccccgac aaatccgtta cccgtgaacc gtcgccggaa
     6961 caaatcaaac aggcggcatc ttatacgggc atagacaaaa tcattttgca acaaggcaaa
     7021 gattacgctt ccttgagcaa aacccacccc aaagcctatt tggatttatc ttcgattgcc
     7081 aaaggcttcg gcgttgataa agttgcgggc gaactggaaa aatacggcat tcaaaattat
     7141 ctggtcgaaa tcggcggcga gttgcacggc aaaggcaaaa atgcgcacgg cgaaccgtgg
     7201 cgcatcggta tagagcaacc caatatcatc caaggcggca atacgcagat tatcgtcccg
     7261 ctgaacaacc gttcgcttgc cacttccggc gattaccgta ttttccacgt cgataaaaac
     7321 ggcaaacgcc tctcccacat catcaatccc aacaacaaac gacccatcag ccacaacctc
     7381 gcctccatca gcgtggtctc agacagtgca atgacggcgg acggtttatc cacaggatta
     7441 tttgttttag gccaaaccga agccttaagg ctggcagaac aagaaaaact cgctgttttc
     7501 ctaattgtcc gggataagga cggctaccgc accgccatgt cttccgaatt tgccaagctg
     7561 ctccgctaaa catacaaacc gattaggaaa caccatgaaa accctgctcc tcaccttcgg
     7621 catcttcctg accgtcatca tcggtatggc ggtcggctat attttctcca aacgcaccat
     7681 caaaggcagt tgcggcggca ttaccgcttt aggtatgaaa aaaatgtgcg actgcgacac
     7741 accttgcgac accctgcaaa aaaagctgga tgaagaaaaa caggcaggcg gcatacgggt
     7801 tgaccgttaa cgccgaaaca aaatgccgtc tgaagcccgg ccggcgggtt cagacggcat
     7861 tgccgcttta cttcgatcgg tttatacgca agacgcgctt caggaaataa atcagattat
     7921 tccccagacg ccttcaggct tccttccgtg ccaccgtaac catagccggg cgcaacacac
     7981 ggtcggacag ggtataaccc ttcttcatca caccaaccac ggtattgggt tcctgctcac
     8041 tggccaccgc ctgcatcgcc tgatggatat tcggatcgag cttatcgccc gctttaggat
     8101 tgatttcctt gatttgcgtg gcatcaaacg ccttctgcaa ctcattcaaa gtcatctgca
     8161 cacccatttt cagcgcatcg aaattaccgc tctgatccaa aagcgccatt tccagataat
     8221 ccttgaccgg caacatttcc acggcaaact tctgtccggc gaacttgtgc gtatcggcaa
     8281 tttcctgctg gtggcggcgg cgcaggtttt gctcgtttgc caaagcgcgc agttgttcgt
     8341 ctttcaactg cgcttccaac tcggcaatcc gcgcctgcaa atcctcataa gccggctcgg
     8401 cggcagcctg ttcctgtaca ccgtccgcat ttcctactgt ctcgacggtt tccaccgcct
     8461 ccacattttc aaccgcttct tcactgtttt gctgctgtgt ctgttcgctc atatcgtatc
     8521 cctcaaaaca aattggaaat caaaatccgg ttattacccg agcaagataa ggacattttc
     8581 aagaaacttc aagcaaaggc aggaaattcc acatccgccg ccgaataccc taccgcaaaa
     8641 accatataaa cggtaagata ccgccgacct tatgcttttc agacggcatc cattatgaaa
     8701 aaaaaccatt tgaacacaac cggtttcgac ctctggcaca ccatccgcga agaaaccgcg
     8761 gccgctgccg ccgccgaacc gatgctggca agttttttgc accaaaccgt gttgcgccac
     8821 gagtccctcg gctccgtcct tgcctaccac ctttccagca aactcggcag cccgattatg
     8881 gacgtgcgcg cgctgtttga aatttaccag caggcattgg gcagcgacac ccaaatcagc
     8941 aaatgtgtcg aagcagactt aaaagccatc tacgaacgcg atcccgcctg cgacgaatat
     9001 tcgctgccgc ttttatattt caaaggcttc cacgcgattc aggcacaccg catcaaccac
     9061 cggctgtatc tcgacggacg caaaacgctg gcgtatttcc tacaaaaccg tatgtccgaa
     9121 gtattcggcg tggacatcca tcccgccgcc cgtttaggat acgggctgat gctcgaccac
     9181 gccaccggct ttgttgccgg agaaaccgcc gtgttgggca acaatatttc gattttgcac
     9241 ggcgtaacgc tcggcggttc gggcaaagaa ggcggcgacc gccaccccaa aatcggcgac
     9301 ggcgtgatga tcggcgcaaa cgcctcgata ttgggcaata tccgcatcgg cagcaatgcc
     9361 aaaatcggcg cgggcagcgt cgtggtttca gacgtgccgc cgtccatcac ggttgtcggc
     9421 gtacccgcca aacccgtggc gcgatcgctc aaaaccccgt cggcggatat ggatcaaaat
     9481 atccagtttg ccgaaatcga ctttatgatt tgaatatccg caccaatgcc gtctgaaacg
     9541 ccaaacgggc ttcagacggc attgcccgct tcaagcctgc gccttaatat gccgccgatg
     9601 ccggcactta tcagtcggac aaaatgcctt ttattcgata cgcccgattc ccacgcaacc
     9661 ggaaataacc ggtttccttg taaacgggcg gagtcgggcg atgattcgga caaagcctat
     9721 ttcaaaagca aaatcagcag caaaacaacc gctatcgctg ccagccacag gctttgccgc
     9781 tgctgcactt tgaccaaatg gatataggca tcgcgcattt cctgccggcg cgcctcatcg
     9841 accaaggcat tgattttgcg cggcagggaa gggatgattt gcgcccagtc gggggcttcg
     9901 tttttgaggt tgcgccaaag ggctttggga ccgacctgcc cgttcatcca tttcaccaaa
     9961 aacggtttgg cggttttcca caagtccaaa tcgggatcga gttggcggcc caagccttcg
    10021 atgttgagca gcgttttttg cagcaatacc agctgcggct ggatttcgac attgaagcgg
    10081 cggctgactt caaacaggcg catcagtacc aagccgaagg aaatctgcga aatcggtttg
    10141 ttgaacacag gctcgcacac ggcgcgaacc gccgcttcca actcttccgc acgcgtgtcg
    10201 gcaggcaccc agcccgattc gacgtgggcg gtggcgacac gtcggtaatc gcggttgaaa
    10261 aaggcgagga aattgatggc gagatagcgt ttgtcgtaat cggtcagcgt accgacgatg
    10321 ccgaaatcaa gggcgatata acggttgtcg gcggcaacca aaatattgcc ggggtgcata
    10381 tccgcgtgga aaaagccgtc gcggaaaact tgcgtgaaaa agatttccac gccgtaatcg
    10441 gcaagtttgt gcaaatcgat gccgtctgct ttgagtttgg cgatgtcgga aaccggcgtg
    10501 ccgtccatcc attcaatcgt cagcacgtcg cttgtgcagt agtcgtaaaa caccttgggc
    10561 acaatcagca tattgctgtt ttggaaattg cgcccgagtt gtcctgcatt ggcggcttcg
    10621 cgcatcaaat ccaattcgtc gtgcaggtat ttgtcgaact ccgccaccac ttcgcgcggc
    10681 ttcagacgct tgccgtctga aaacaagcgt tcgacccaag ccgcgccgaa acgcatcagc
    10741 gacaagtctt gttcgataag gggcaagagg ttggggcgca aaactttgac cgccactcgt
    10801 tcgcccgaat gcaggcgggc tttgtgtact tgggcgatgg acgcgctggc gacgggctcg
    10861 gtttcaaatt ccgcatacag cttttcgatg ggctgaccca gcgatttttc gatttgttca
    10921 cgcgaaagcc gcgcgtcaaa aggcggcact ttgtcttgca gctttgccag ttcgacggcg
    10981 taatcgtgcg gaatcaaatc ggggcgtgtg gacaaaacct gcccgaactt gatgaaaatc
    11041 ggccccaggc tttccaaggc aaggcgcaga cggacggcag gcggttcgtt tttcaatttg
    11101 gacgactgcg gcatcatttt cagcagagcg catatccaac cgctacccat cagcgaaacg
    11161 cacagacctg ccagccgata gcggtaaaaa gtcccgacaa tgaccgtcag gcgtttcaac
    11221 catttcatat ataaaatccc gaatacagca tttatcggac aatcaaaaaa tcttaccgag
    11281 cagatagccc aaaaaggcaa tcagcaaccc gaaaaccagc ggtttgatat tgcggggcgg
    11341 ctcgggttgc gaagatgcgg aaatatcatc ttcccgcccg ccgtgaagtt caagatattc
    11401 gggcatttcc ccatccgcgc ctcctccttc gccctccccc tcctccggcg gcacgaccgt
    11461 ttccaactcc atatacgggt aataatatcc aaacccaaat agctgaaata atcatgcaac
    11521 tcttcccgtt tcgcccaagt gcatttttcc tcaaccagca cttgcggttt ggaatcgagc
    11581 gattcgatca atccttccgc cttttcttcg ccgagattct ccttaaggca ctcccggata
    11641 agcccgcgat ccacttgggg cgggtaggaa acatatacat cgtacaaatc gtttcggtaa
    11701 tctttactca tctcaatcat aagggaacaa atacgcctga taccgttccg cccgttcctt
    11761 tcgggaaacc cgattcatct tcaagcaatc ggattatatg taaattcatc ccgataatat
    11821 attttccaaa agtaaaaatg ccgtccgaac gttcagacgg cataacacaa accagccggt
    11881 cacacggaaa acgacgatcc gcaaccgcag gttgtttccg cgttcggatt gcggatgacg
    11941 aactgcgaac cctgcagact ttccgtatag tcgatttccg caccgaccag atattgatag
    12001 ctcatcggat cgaccaaaaa gaccaaaccg tttttctcaa tttcaaaatc gtcgtcgttt
    12061 ttgatttcgt caaaagtaaa tccgtactgg aaacccgaac agccgccgcc gttgacaaaa
    12121 acccgcaatt tcaaatcggg attgttttct tcggcaatca aatcggcaac tttggcacag
    12181 cagctgtcag taaaaataat agggctttcg tccgacatag tgttattcct taatataata
    12241 ttttctgcat tctctctcaa ccccccttca aaggcaagca gggcttcgcc tttgaaaaag
    12301 gaattgtccc aatagataag tttgaccgcc tgcaatttca agccccaaac tcaaaccgtc
    12361 ctgccgaacc actcgacacg cccgataatc tccacatcat cggtcaagtc gttcaaattg
    12421 atttcaaaag caggataagc ctcgttggcg gaaatgacat tgataatccc gccggggacg
    12481 atttgcaggc gtttgaccaa cagattttca ttaatccgca acacatacag tccgtctctc
    12541 ggcgtatttt ccccatgatt gaccaaaatc gaatctccgt cattcaaaac cccctccatc
    12601 gaatccccct tgacggaaat tacagacagg tttttcgtat ctcgggtaac ataattctca
    12661 atccaatgcc gtctgaacgc cattgtaaat accggttcct catgaccgac aaactgcccg
    12721 tatcccgcag ccgcccgaat atcatatctc ggcacaaaga caaactcgtc cgtatcaact
    12781 tcatttccca aggtatcgta agcaagggat ttttttgggg cttcatccgg aaacggatta
    12841 ccctcccctg tcagcagcca atcgatacta caccccttca actgcttaat ttttttcaat
    12901 gtttcagact tcggcagacc gccttcattc catattctgc tgaagcccgc aatcgtcatt
    12961 tcaatatcgg atgcgatttt tgcctgcctc gcttcacttt tccataaaaa aaccagtctg
    13021 tctttaaagg tttccataaa tatccttccg ctccccttca ttcaatcatc taaagtaaac
    13081 atgaaatata ttt
//
LOCUS       DAXFZM010000068        12955 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.068, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000068 DAXFZM010000000
VERSION     DAXFZM010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12955)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12955)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12955
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.068"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..434)
                     /locus_tag="ACFJAG_001599"
     CDS             complement(<1..434)
                     /locus_tag="ACFJAG_001599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006996595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA methyltransferase"
                     /protein_id="HFC3980848.1"
                     /translation="MIYIDPPYNTETDSFAYNDKFSHSTWLTFMKNRLEIAKELLKDD
                     GLIFVQCDDKEQAYLKVLLDETFTRENFINCIAVKMSEPSGNKMAHTSHRLPKIKEYI
                     LIYKNKNIKLNPIREQKSEWDNEYNIFLENFTQEDKKFIDLIV"
     gene            complement(668..1120)
                     /locus_tag="ACFJAG_001600"
     CDS             complement(668..1120)
                     /locus_tag="ACFJAG_001600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HFC3980849.1"
                     /translation="MKTGIQTELAQALLSHEKIWANEEKTILAKNILLDLVEKTDPSI
                     IGLLLNNDELKRHFFVEVNGVLVFKLQDFRFFLDKHSINNSYTKYANRIGLTDGNRFL
                     KDNSDIVLDFPFKDCVLNGGQSTEEGEEIYFKRNNSQPASQPANYTPN"
     gene            complement(1337..2257)
                     /gene="truB"
                     /locus_tag="ACFJAG_001601"
     CDS             complement(1337..2257)
                     /gene="truB"
                     /locus_tag="ACFJAG_001601"
                     /EC_number="5.4.99.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HFC3980850.1"
                     /translation="MTNKPAKRPVNGVLLLDKPEGLSSNTALQKARRLFHAEKAGHTG
                     VLDPLATGLLPVCFGEAAKFAQYLLDADKAYTATLKLGEASSTGDAEGEIIAAARADI
                     SLAEFQTACQALTGNIRQVPPMFSALKHEGKPLYEYARKGIVIERKPRDITVYSIDIA
                     EFDAPKAVISVRCSKGTYIRTLSEGIAKHIGTFAHLTALRRTETAGFTIAQSHTLEAL
                     ANLNETERDGLLLPCDVLVSHFPQTVLNDYAVHMLQCGQRPRFEEDLPSDTPVRVYTE
                     NGRFVGLAEYQKEICRLKALRLMNTAASAA"
     gene            complement(2315..2839)
                     /locus_tag="ACFJAG_001602"
     CDS             complement(2315..2839)
                     /locus_tag="ACFJAG_001602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980851.1"
                     /translation="MNNLIPEHLAAYAHSDNLQIEGGHRCFSLSCQGRDTFHIRYYGE
                     PFDGLITDTDKAPVKIVAVEAVSGDEIVLFDGAEHGYNAMFCDKYSQNQKQNRTLTDL
                     DEYTYRVPIHLYYNIDYEDEYEDFVNSEGQVPLIDGRIISFDSLKRNGFDAISIDLID
                     EKHSVRELLNEELS"
     gene            complement(2850..3221)
                     /gene="rbfA"
                     /locus_tag="ACFJAG_001603"
     CDS             complement(2850..3221)
                     /gene="rbfA"
                     /locus_tag="ACFJAG_001603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HFC3980852.1"
                     /translation="MRKPQRGYARQDRVKEQIMRELAELVRTGLKDPRAGFITINEVE
                     ITRDYSHATVFYTVLNQDTREITEEVLEHARGHLRSELSKRIKLFKIPELHFKYDESL
                     ERGMSLSALIDQVAAEKPVED"
     gene            3404..4648
                     /gene="clpX"
                     /locus_tag="ACFJAG_001604"
     CDS             3404..4648
                     /gene="clpX"
                     /locus_tag="ACFJAG_001604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HFC3980853.1"
                     /translation="MSNENRTCSFCGKSKSHVKHLIEGENAFICDECVSNCLEILYEG
                     DNGGTPPENAGGEPEESGKLPTPAEIVANLDDYVIGQGQAKKALAVAVYNHYKRLRHP
                     KADGGVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQ
                     IITKLLGKCDFDVEKARHGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT
                     VASVPPQGGRKHPNQEFINVDTANILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSK
                     DENAGITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDEDALINILTEPKNALVK
                     QYQALFGIENVGLEFEEGALRSIARQAMERKTGARGLRSIVERCLLDTMYRLPDLQGL
                     KKVVVGKAVIEEGREPELVFES"
     gene            complement(4755..5948)
                     /locus_tag="ACFJAG_001605"
     CDS             complement(4755..5948)
                     /locus_tag="ACFJAG_001605"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HFC3980854.1"
                     /translation="MQNYLTPNFAFAPMIPERASGSRVWDTEGREYIDFSGGIAVNAL
                     GHCHPALVDALNAQMHKLWHISNIYTTRPAQELAQKLVKHSFADKVFFCNSGAEANEA
                     ALKLARKYARDRFGGGKSEIVACINSFHGRTLFTVSVGGQPKYSKDYAPLPQGITHVP
                     FNDIAALEAAVGEQTCAVIIEPIQGESGILPATAEYLQAARRLCDRHNALLILDEVQT
                     GMGHTGRLFAYEHYGVVPDILSSAKALGCGFPIGTMLATEKIAAAFQPGTHGSTFGGN
                     PMACAVGSRAFDIINAPETLHNVRSQGQKLQTALLDLGRKTGLFSQVRGMGLLLGCAL
                     DTPYRGRSSEIAATSLKHGVMILVAGADVLRFAPSLLLNDEDIAEGLRRLEHVLTEFA
                     AANRP"
     gene            complement(6047..6304)
                     /locus_tag="ACFJAG_001606"
     CDS             complement(6047..6304)
                     /locus_tag="ACFJAG_001606"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980855.1"
                     /translation="MKVTKKPPRFRAACFAYGMDFKQAQKAPHVCVVPIAVSGCKRFA
                     LHDEMPSEDKNIGEILNQNAAAPQALYRNFFVFFSYPVENI"
     gene            6352..6852
                     /locus_tag="ACFJAG_001607"
     CDS             6352..6852
                     /locus_tag="ACFJAG_001607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980856.1"
                     /translation="MDAMPQTAVQNENLHTCSIIVDDAQDFSPMLLDAGRDDTLISES
                     MIPQIRTVAALIAAERHDFSRSSPAEFTDAADFFAARILVLGVRRFHLDVSLLQILKT
                     ANKRACRFAEKHRLFFTPAQAELSLNKHKNRRLLTIETEHEVENKGNPVANSLAFVRK
                     LHTLPL"
     gene            6937..7491
                     /locus_tag="ACFJAG_001608"
     CDS             6937..7491
                     /locus_tag="ACFJAG_001608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980857.1"
                     /translation="MKKIIASALIATFALTACQDDTQARLERQQKQIEALQQQLAQQA
                     DDTVYQLTPEAVKDTIPAQAQANGNNGQPVTGKDGQQYIYDQSTGSWLLQSLIGAAAG
                     AFIGNALANKFTRAGNQDSPVARRARAAYHQSARPNARTSRDLNTRSLRAKQQAAQAQ
                     RYRPTTRPPVNYRRPAMRGFGRRR"
     gene            7505..7705
                     /locus_tag="ACFJAG_001609"
     CDS             7505..7705
                     /locus_tag="ACFJAG_001609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009348581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980858.1"
                     /translation="MPSEGLSDGIFVFVRGIVMLPFDFQTAFCFQAFDVGMAILIYVR
                     WQGGIVIPPLGFQTASYRTVKP"
     gene            7836..7942
                     /locus_tag="ACFJAG_001610"
                     /pseudo
     CDS             7836..7942
                     /locus_tag="ACFJAG_001610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(8056..9444)
                     /locus_tag="ACFJAG_001611"
     CDS             complement(8056..9444)
                     /locus_tag="ACFJAG_001611"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HFC3980859.1"
                     /translation="MSIKFADLNLDKNILSAVSSEGYESPTPIQAQAIPFALEGCDIM
                     ASAQTGSGKTAAFLLPTLQRLTKRSEKPGKGPRALVLAPTRELAAQVEKNALAYAKNM
                     RWFRTVSIVGGTSFGYQTRALSKPVDLIVATPGRLTDLMQSGKVDFERLEVLILDEAD
                     RMLDMGFIDDIETIVEATPADRQTLLFSATWDGAVGKLARKLTKDSEIIEVERVDGQG
                     KIEEQLLYCDDMRHKNRLLDHILRDANIDQCVIFTSTKAMTEVIADELYEKGFAANCL
                     HGDMPQGWRNRTLTDLRKGRCKILVATDVAARGIDVPTITHVINYDLPKQAEDYVHRI
                     GRTGRAGRTGIAITFAEVNEYVKVHKIEKYINRKLPELTIEGMEPARKRKSAGGKPKG
                     KGGWGDRKSGGRRGDHKPGKEGFGGKTRGEGFKKEGFKKDSFKKTGEGFKGKRKAGDS
                     FAGKSERRYKDR"
     gene            9772..10719
                     /locus_tag="ACFJAG_001612"
     CDS             9772..10719
                     /locus_tag="ACFJAG_001612"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HFC3980860.1"
                     /translation="MTDITPFANRLGKNIKHLMKWAKRNGIEAWRIYDRDIPQFPFAA
                     DVYGDRIHLQEYDTGWLMRPGEYEAWLAEVLEAVAFVTGFEPEQIRLKRRERQKGLQQ
                     YEKTGKAGDDFVIAENGRKFWVNLDKYLDTGFFLDHRNTRKKVGETAAGKRFLNLFSY
                     TGSFTVYAATGGAASSETVDLSNTYLDWARRNFELNGIDMERHKIVRADVFQYLQTAY
                     GEGRQFDLIVMDPPSFSNSKKMPGILDIQRDHQKLIDGAVNLLASDGILYFSNNLRSF
                     VLDDSVSEQYAVKDISKQSVPEDFRNKKIHRCWEIRHKS"
     gene            complement(10771..11103)
                     /gene="trxA"
                     /locus_tag="ACFJAG_001613"
     CDS             complement(10771..11103)
                     /gene="trxA"
                     /locus_tag="ACFJAG_001613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA];
                     GO_process: GO:0006662 - glycerol ether metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin TrxA"
                     /protein_id="HFC3980861.1"
                     /translation="MSSELIVHTGDAAFEQDVLKSDLPVLLDFWAPWCGPCKMIAPIL
                     DDIAAEFEGRLKVVKINIDDNEATPSRFGVRGIPTLMVFKNGEVVATKVGALAKGQLT
                     AFVEASIA"
     gene            11401..11874
                     /gene="dnrN"
                     /locus_tag="ACFJAG_001614"
     CDS             11401..11874
                     /gene="dnrN"
                     /locus_tag="ACFJAG_001614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster repair protein DnrN"
                     /protein_id="HFC3980862.1"
                     /translation="MTDFSVWEAAPFGATVDHILQRYHNVHRAQFEELVPLAQKVAQV
                     HADTFPAEIAGLLADMRDELLMHMMKEERMLFPMINQGVGRGAAMPISVMMHEHEEHD
                     RAIARLKELTGNFHAPEGACGSWTRLYALAKEMADDLNDHIHLENDILFARVLDS"
     gene            complement(11945..12766)
                     /gene="nadE"
                     /locus_tag="ACFJAG_001615"
     CDS             complement(11945..12766)
                     /gene="nadE"
                     /locus_tag="ACFJAG_001615"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008795 - NAD+ synthase activity [Evidence
                     IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) synthase"
                     /protein_id="HFC3980863.1"
                     /translation="MMRIFSTGGKMDTQAVITHIVRWLDEYAAQANAKGFVVGVSGGI
                     DSAVVSTLAARTGRTTLLLDMPIRQHPGQLERARRHIRNLQGQYANVSAQTANLTDTF
                     QTFEQTVGVHRTAFANQPLSLANARSRLRMLTLYYYGQIHGLLVTGTGNKVEDFGVGF
                     FTKYGDGGVDISPIADLTKTQVYRLAEALGVDEAIQKAPPTDGLWDTERTDEEQMGAS
                     YPELEWAMGVYGTRKPEDFEGRRREVLEIYTRLHRAMQHKINPIPVCRIPPELLG"
     gene            complement(12763..>12955)
                     /locus_tag="ACFJAG_001616"
     CDS             complement(12763..>12955)
                     /locus_tag="ACFJAG_001616"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980864.1"
                     /translation="SNNKKYEYVLKPKAASCRLNCQQYYNTRHLAASLFLYDFFKRGM
                     GKIFINPPSIYSNCTAGRL"
BASE COUNT         3059 a         3297 c         3378 g         3221 t
ORIGIN      
        1 actattaaat caataaattt tttatcttct tgtgtaaaat tttctaaaaa aatattgtac
       61 tcattgtccc attctgattt ttgctctcta atagggttta attttatatt tttattctta
      121 tagataagaa tatattcctt tatctttggt agtctatgcg atgtatgtgc cattttgtta
      181 cctgatggct ctgacatttt tacagcaatg cagtttataa aattttctct tgtaaaagtt
      241 tcatctaata aaacttttaa ataagcctgt tccttatcat cgcattgaac aaagattagc
      301 ccatcatctt ttaataactc tttcgcaatt tccaagcgat ttttcataaa tgttagccaa
      361 gtggaatgtg aaaatttatc gttatatgca aagctatcgg tttctgtatt atacggtgga
      421 tcaatataaa tcaactttac tttgccttta aactgcttgg caagcgaatg cagggcaatc
      481 agattattgc ctttgataat gagattttcg gctggcgtac cgtctgaacg gcgtttgatt
      541 tcgtcaacgg gttgcttgcc gtctgcggtg tggcgggaga attttgagaa tgcttttgcg
      601 tcaaaaagcc agtcaatttc atcaaaagca agcgtttgat taaaaaagat ttcttgtctt
      661 tttctggtta atttggtgta taattggctg gctggctggc tggctggctg ttattgcgtt
      721 taaaataaat ttcttcgcct tcttcggtgc tttgcccgcc attcaatacg caatctttaa
      781 acggaaaatc caacacaata tccgaattgt ctttcaaaaa gcggttgccg tccgtcaaac
      841 caatgcggtt ggcgtatttt gtgtaggaat tattgatgct gtgtttgtcc aagaaaaaac
      901 ggaaatcctg caatttaaac accaaaacac cattcacttc cacaaagaaa tggcgtttta
      961 actcatcatt attcaataac aaaccgataa tggacgggtc ggttttttcc accaaatcca
     1021 acaggatgtt tttggccaaa atggtttttt cttcgttcgc ccatattttt tcgtgtgata
     1081 gcagggcttg ggctaattcg gtttgaatgc ctgtcttcat cgttataaat cctcatcagt
     1141 tattttaatg tgccattctt gtgtaacggc aaatggcttt acaaataaat tataataaaa
     1201 tcaattcttt gctgtctttg ctgtttccgg gggcgttcgc aacgttgcga taagcggggc
     1261 gggtgtccga atgcatcggg attttgcgga aatatcaaca tattattcaa acacagcccg
     1321 tatttttaac cgccgctcag gcggcggatg ccgccgtgtt catcaggcgc aaggctttca
     1381 gacggcatat ttctttttga tattccgcca aaccgacaaa gcggccgttt tccgtgtaaa
     1441 cgcgtaccgg cgtatcggaa ggcaggtctt cctcgaaacg cggccgttgc ccgcattgga
     1501 gcatatggac ggcataatcg tttaaaacgg tttggggaaa gtgtgaaacc aatacgtcgc
     1561 agggcagcag cagaccgtcg cgttctgttt cgtttaaatt tgccaaagct tcgagcgtgt
     1621 ggctttgggc gatggtaaag ccggcggttt cggtgcggcg tagggcggtc aggtgggcga
     1681 atgtgccgat gtgtttggcg atgccttcgc tgagggtgcg gatgtaggtg cctttgctgc
     1741 aacgcacgct tatcacggct ttgggcgcgt caaactcggc aatatcgata gagtaaacgg
     1801 taatgtcgcg cggtttgcgt tcgataacaa tgcctttgcg cgcgtattcg tacaacggtt
     1861 tgccttcgtg cttgagggcg gaaaacatcg gcggcacttg gcggatgttg cctgtcagtg
     1921 cttggcaggc cgtctgaaat tcggctaagg aaatatcggc gcgggcggcg gcaatgattt
     1981 ctccttcggc atcgcccgtg ctgctggctt cgccgagttt cagcgtggcg gtgtaggctt
     2041 tgtcggcatc cagcaggtat tgggcgaact tggccgcttc gccgaagcag acgggcaaaa
     2101 gtccggttgc caaaggatcg agcacgccgg tatgccctgc tttttcggca tgaaacaaac
     2161 gccgcgcttt ttgcagggcg gtgttgctgg aaaggccttc gggtttgtcg agaagaagaa
     2221 cgccgttgac cgggcgtttg gcgggtttat tggtcatatt aattagggaa tattaatgtt
     2281 cagaccgtct gaaagggttc ggacggcctg cgtgtcagct taattcttca ttcaataatt
     2341 cacgaacaga gtgtttttca tcaattagat caatgctgat tgcatcaaag ccatttcgtt
     2401 ttaatgagtc aaaactaatg atgcggccat caattaaggg gacttgtcct tcagaattga
     2461 cgaaatcttc atattcatct tcgtagtcta tattgtaata aagatgaatc ggaactcggt
     2521 aagtatattc atccaaatca gttaacgttc tgttttgctt ttgattttgg ctatatttgt
     2581 cgcagaacat agcgttatag ccatgttccg ccccatcaaa caatacgatt tcatcgccgc
     2641 ttacagcttc taccgccaca atttttaccg gcgccttatc agtatcggta atcaatccat
     2701 caaaaggctc tccatagtaa cggatgtgga aagtatctct accttggcag gataatgaaa
     2761 agcaacgatg cccgccttca atttgcaggt tatcactatg tgcataggcg gctaaatgtt
     2821 cgggaatcag attgttcatt ctggcagtat cagtcttcaa ccggtttttc cgccgccact
     2881 tgatcgataa gggcggacag gctcataccg cgttccaaag attcgtcgta tttgaaatgc
     2941 agttcgggga ttttgaacag cttgatgcgt ttggacaatt cgctgcggag gtgtccgcgc
     3001 gcgtgttcca gcacttcttc cgtaatttcg cgcgtatctt ggttcaaaac ggtgtagaac
     3061 acggtggcgt ggctgtaatc gcgggtaatt tcgacttcgt tgatagtgat gaagccggcg
     3121 cgcgggtctt tcagtccggt acggacgagt tcggcaagct cgcgcataat ttgttctttg
     3181 acacggtctt ggcgggcgta gccgcgttgg ggttttctca tgaatatcct cagatttggt
     3241 gtcagacggc atttctgccg ccggggcggt tgcgaaaggg cgtattatag ccgaatcggc
     3301 gggattttaa ggtaatacgt tgataagcac ggatatagtt attatacttg gcaacccgaa
     3361 cggcgcatgc cgtttctgca acgcatacat tgtaaagaaa gccatgtcca acgaaaaccg
     3421 tacctgttcc ttttgcggaa aatccaaatc acacgtcaaa catttgattg agggcgaaaa
     3481 cgcctttatc tgcgacgaat gcgtctcaaa ctgcctcgaa atattgtacg aaggcgacaa
     3541 cggcggcacg cctccggaaa atgccggagg ggagccggaa gaatccggca aactgcccac
     3601 gcccgccgaa atcgttgcca acctcgacga ttatgtcatc gggcaggggc aggcgaaaaa
     3661 ggcgctggcg gttgcggttt acaaccatta caaacgcctg cgccacccga aagccgacgg
     3721 cggtgtcgaa ttgtcgaaat ccaacatcct gcttatcggc ccgaccggat cgggtaaaac
     3781 gctgttggcg caatctttgg cacgcaaact ggacgtgccg ttcgtgatgg cggatgcgac
     3841 cacgctgacc gaagccggct atgtcggcga agatgtcgaa caaatcatta ccaaactgtt
     3901 gggcaaatgc gatttcgatg tcgaaaaagc ccggcacggc attgtctata ttgacgaaat
     3961 tgacaaaatt tcgcgtaaaa gcgacaaccc gtccatcacg cgcgacgtgt ccggcgaagg
     4021 cgtgcagcaa gccttgctga aactgattga aggtacggtg gcaagcgttc cgccccaagg
     4081 cggacgcaag catccgaatc aggaatttat caacgttgat accgccaaca tcctgtttat
     4141 ctgcggcggc gcgtttgcag gcttggaaaa agtgattcgc cagcgcaccg agaaaggtgg
     4201 tatcggtttc ggcgcgtccg ttcacagcaa ggacgaaaat gccggcatta ccaagctgtt
     4261 cggcatcgtc gaaccggaag atttaatcaa attcggcctg attccggaat taatcggacg
     4321 tttgcccgtg attgcaactt tagaagaact ggatgaggac gcgctgatta atattttaac
     4381 cgagccgaaa aacgctttgg tcaagcagta tcaagccttg ttcggcatag aaaacgtcgg
     4441 gttggaattt gaagaaggcg cattgcgttc catcgcgcgg caggcaatgg aacgcaaaac
     4501 cggcgcgcgc ggcctgcgtt ccatcgtcga acgctgcctg ctcgatacga tgtaccgcct
     4561 gcccgatttg caaggcttga aaaaagtggt ggtcggcaag gcagtcatcg aagagggcag
     4621 ggaaccggaa ttggtgttcg agtcctgatg gcaaacaaaa ccgcttcgga acgttggatc
     4681 acgtttccga agcggttttt tgtttctgat gccgtctgag gccttcccgt cttcagacgg
     4741 catctgcttt ctgcctaggg gcggtttgcg gcggcaaatt ccgtcagcac gtgttccaaa
     4801 cgccgcaaac cttccgcaat atcctcatcg ttcaacagca gcgaaggcgc gaaacgcaat
     4861 acgtccgcac ccgcaactaa gatcatcacg ccgtgtttca aggaggtagc ggcgatttcg
     4921 gatgagcgtc cgcgataagg cgtgtccaac gcgcagccga gcagcagccc catcccgcga
     4981 acctgtgaga acaagcctgt tttcctgccc aaatccagca atgccgtctg aagtttctgc
     5041 ccctgactgc ggacgttgtg caaggtttcc ggcgcgttga tgatgtcgaa ggcgcggctg
     5101 ccgaccgcac acgccatcgg gttgccgccg aaagtcgagc cgtgcgtgcc cggttggaag
     5161 gcggcggcaa tcttttctgt cgccagcatc gtgccgatcg gaaagccgca gcccaaggct
     5221 tttgccgaac tcaaaatatc gggaacaacg ccgtaatgtt cataggcaaa cagcctgccc
     5281 gtatgcccca tcccggtttg aacttcgtcc aaaatcaaca acgcattgtg ccggtcgcac
     5341 agacggcgcg ccgcctgcaa atattccgca gtggcgggca ggatgccgct ttcgccctgt
     5401 atcggctcga tgatgaccgc gcaggtctgt tcgccgacgg cagcttccag tgcggcaata
     5461 tcgttgaacg gaacgtgcgt aatgccttgc ggcagcggtg cataatcctt actgtatttc
     5521 ggctgtccgc cgacggacac ggtaaacagc gtgcgtccgt ggaaactgtt gatacaggcg
     5581 acgatttcgc ttttgcctcc gccgaaacgg tcgcgcgcat atttccttgc cagctttaac
     5641 gccgcctcat tcgcttccgc gcccgagttg cagaaaaaaa ccttgtcggc aaaactgtgt
     5701 ttcaccaatt tttgcgccaa ttcctgcgcc ggccgcgtcg tatagatatt ggaaatgtgc
     5761 cacagcttgt gcatctgcgc gtttaaagca tcgacaaggg cagggtggca gtgccccaga
     5821 gcgttaacgg cgatgccgcc tgaaaaatca atatattcac gcccttccgt atcccaaacg
     5881 cggctgcctg aagcgcgttc gggaatcatc ggggcaaagg cgaaattggg ggtcagatag
     5941 ttttgcataa ttgctcctga ttgcggtttt gttcgggatt atgcaccgtt tttcaaggcg
     6001 gataaaggga aattgccgac aatatcgggc agtggtaaaa ataaacctaa atattttcaa
     6061 ccggatagct gaaaaaaaca aaaaaatttc gatataatgc ttgaggcgcg gcagcgtttt
     6121 gatttagaat ctccccaata tttttatctt cggacggcat ttcatcatgc aaggcaaaac
     6181 gtttacaacc gcttactgct attggtacca cacagacgtg cggtgctttt tgcgcttgct
     6241 tgaaatccat cccatacgca aaacaggccg ctcgaaaacg gggcggcttt tttgttacct
     6301 tcacacaggt cgcccgattc ggcaacacac gacagaatca ggaaaatgac catggatgca
     6361 atgccccaaa ccgccgtaca aaacgaaaac ctgcacactt gcagcattat tgtcgatgat
     6421 gcgcaggatt tttcccccat gcttctcgat gcagggcggg acgacacgct catcagcgaa
     6481 tcgatgattc cgcaaatccg caccgttgcc gccctgatag ccgccgaacg gcacgacttc
     6541 agccgcagca gccccgccga gtttaccgat gccgccgatt tttttgccgc acggattctc
     6601 gtattgggcg tgcgacgctt ccatctggac gtatcgctgc ttcagatttt gaaaaccgca
     6661 aacaagcgcg cctgccgctt tgccgaaaaa caccgcctgt ttttcacacc cgcacaagcc
     6721 gaattgagcc tgaacaaaca caaaaaccgc cgcctgctga ccatagaaac cgaacacgaa
     6781 gtcgaaaaca aaggcaaccc tgtcgccaac agcctcgcat ttgtccgcaa actgcacacc
     6841 ctacccctgt aaacatcacg atttgccggc agaatgcttg ccaaaattcc cgacggcgat
     6901 acaatacaac cgattttcca cccgaacagg acacacatga aaaaaatcat cgcctccgcg
     6961 cttatcgcaa cattcgcact caccgcctgc caagacgaca cgcaggcgcg gctcgaacgg
     7021 cagcagaaac agattgaagc cctgcaacag cagctcgcac agcaggcaga cgatacggtt
     7081 taccaactga ctcccgaagc agtcaaagac accattcctg cccaggcgca ggcaaacggc
     7141 aacaacggtc agcccgttac cggcaaagac gggcagcagt atatttacga ccaatcgaca
     7201 ggaagctggc tgctgcaaag cctgattggc gcggcggcag gcgcgtttat cggcaacgcg
     7261 ctggcaaaca aattcacacg ggcgggcaac caagacagcc ccgtcgcccg tcgcgcgcgt
     7321 gctgcctacc atcagtccgc acgccccaat gcgcgcacca gcagggattt gaacacgcgc
     7381 agcctccgtg caaaacaaca ggcggcgcag gcgcagcgtt accgcccgac aacgcgcccg
     7441 cccgtcaatt accgccgtcc cgctatgcgc ggtttcggca gaaggcggta aacccggcgc
     7501 gccaatgccg tctgaagggc tttcagacgg catttttgta tttgttaggg gcattgttat
     7561 gttgccgttt gattttcaga cggcattttg tttccaagcg tttgatgtcg ggatggcaat
     7621 tctgatctac gtgcgttggc agggcggcat tgtcataccg ccgttgggtt ttcagacggc
     7681 atcatatcga accgtcaagc cgtagggcga gattgggtag gcaggaatgc ccatcctgca
     7741 tctgaaaccc ttctgcgtca ttcccacgca ggaaggaatc tagatatttg aatttacgga
     7801 aattttcaat cgttgccaaa gcggaaaagg gtttttatag tggattaaca aaaatcagga
     7861 caaggcgacg aagccgcaga cagtacagat agtacggcaa ggcgaggcaa cgcggtaccg
     7921 gtttaaattt aatccactat attgcagatt aatcctttgg gtatcaaagc cgggcggtgc
     7981 tgaaacatta caaaaatgcc gtctgaaact cgaaatcggt ttcagacggc attggtttac
     8041 gcggcaggtt ggggcttagc ggtctttgta acggcgttcg cttttgcctg caaaagagtc
     8101 gccggctttg cgtttgcctt tgaagccttc gccggttttt ttgaaactgt ctttcttaaa
     8161 gccttctttc ttgaaacctt cgccgcgcgt tttgccgccg aagccttctt tgcccggttt
     8221 atgatcgccg cgccggccgc cggatttcct atcgccccag ccgcctttgc ctttcggctt
     8281 gccgcctgcg gatttgcgtt tgcgggccgg ctccatgcct tcgatggtca gttcgggcag
     8341 tttgcggtta atgtattttt cgattttgtg gactttgacg tattcgttca cttcggcaaa
     8401 cgtaatcgca atacccgtgc ggcctgcgcg gccggtgcgc ccgatgcggt ggacgtagtc
     8461 ttccgcctgt ttcggcaggt cgtagtttat gacgtgggta atggtcggta cgtcaatacc
     8521 gcgtgcggca acgtcggtgg caaccaaaat tttgcagcgg cctttacgca aatccgtcag
     8581 cgtgcggttg cgccagccct gcggcatatc gccgtgcagg cagttggcgg cgaaaccttt
     8641 ttcgtacaat tcatccgcga tgacttcggt catcgctttg gtggacgtga aaatcacaca
     8701 ttggtcgatg ttggcatcgc gcaggatgtg gtcgagcagg cggtttttgt ggcgcatatc
     8761 gtcgcagtac aacaactgct cttcgatttt gccttggccg tccacgcgtt cgacttcgat
     8821 aatttcagag tctttggtca gtttgcgcgc cagtttgccg actgcgccgt cccaagtggc
     8881 ggagaacaat aaagtctgac ggtcggccgg ggtggcttcc acgatggttt cgatgtcgtc
     8941 gataaagccc atatccaaca tacggtcggc ttcgtccaaa atcagcactt ccaaacgttc
     9001 aaaatcaact ttgccgcttt gcatcaggtc cgtcagacgg cccggagtgg cgacaatcaa
     9061 atcgaccggt ttgctcaggg cgcgggtttg gtagccgaac gatgtgccgc cgacgatgct
     9121 gacggtgcgg aaccagcgca tatttttggc atacgccagc gcgtttttct cgacttgcgc
     9181 cgccagttcg cgggtcggtg ccaacaccag cgcgcgcggg cctttgcccg gtttttcgct
     9241 gcgtttggtc agtcgctgca aagtcggtaa cagaaaggct gcggtttttc cggagccggt
     9301 ttgcgccgaa gccatgatgt cgcagccttc caaagcaaac ggaatagctt gcgcctgaat
     9361 cggcgtcggg ctttcgtaac cctcgctgct gacggcggac aaaatgtttt tatcaaggtt
     9421 caaatcggca aatttaatag acatggctat ccttggaaga caacaacgcc cgcgtccgaa
     9481 aggttcagac ggcctgaagc agggaagggt aacgatacgg ggaatgtgaa gttacagggt
     9541 tgtcgcaagc ggcttgcttg tggtttacat cgacggcaac ctgcacagat acgctttgca
     9601 agatcaaagc aacaaaagaa acgcgcccgt aagggcggtt taggttggaa ggcgatggct
     9661 tcgtatgacg atataagcag agaatggtat agggtttgcc cgaaaaggtc aagcaatcgg
     9721 gcgttaatta cagtaaaatt tccgttttcc actttattcc gcctgaaatc aatgaccgac
     9781 atcacaccgt ttgccaaccg cttgggcaaa aacatcaaac accttatgaa atgggcgaaa
     9841 cgcaacggca tcgaagcctg gcgcatttac gaccgcgaca tcccccaatt cccttttgcc
     9901 gccgatgttt acggcgatcg aatccacctt caggaatacg ataccggctg gctgatgcgg
     9961 cccggagaat acgaagcgtg gcttgccgaa gtattggaag ccgtcgcttt cgttaccggt
    10021 tttgaacccg aacaaatccg tctcaaacgc cgcgaacgcc aaaaaggttt gcagcagtac
    10081 gagaaaaccg gcaaggcggg cgacgatttc gtcattgccg aaaacggccg caagttttgg
    10141 gtcaacctcg acaaatacct cgacaccggc ttcttcctcg atcaccgcaa cacgcgcaaa
    10201 aaagtcggcg aaacggcggc gggcaaacgt tttttgaacc tgttttccta caccggcagc
    10261 ttcaccgtct atgccgccac cggcggcgcg gcatccagcg aaaccgtcga tttgtccaac
    10321 acttatctcg attgggcgag gcgcaatttt gaattgaacg gcatcgatat ggaacggcac
    10381 aaaatcgtcc gcgccgacgt gttccaatac cttcagacgg catatgggga aggcaggcag
    10441 ttcgacctca ttgtgatgga cccgcccagt ttttccaaca gcaagaaaat gcccggcatc
    10501 ctcgacatcc agcgcgacca tcaaaaactc atagacggcg cggtgaacct gctcgcttca
    10561 gacggcattt tgtatttttc caacaacctg cgcagcttcg ttttggacga ttcggtatcg
    10621 gaacaatacg ccgtgaaaga catttccaaa caatccgttc ccgaagattt ccgcaacaaa
    10681 aaaatccacc ggtgttggga aatccgccac aaatcttaag ggtgcgaaaa agccgccgga
    10741 atcttccggc ggcttttcga ttgcgcttta tcaggcgatg gaggcttcga caaaggcggt
    10801 cagctgacct tttgccaatg cgccgacttt ggtggcgacg acttcgccgt ttttgaacac
    10861 catcagggtc ggaatgccgc gcacgccgaa acgggacggg gtggcttcgt tgtcgtcgat
    10921 gttgattttg actactttca gacggccttc aaattcggcg gcaatgtcgt ccaaaatcgg
    10981 ggcaatcatt ttgcaggggc cgcaccacgg agcccaaaag tccagcagga cggggaggtc
    11041 ggatttcaaa acatcttgct cgaaggcggc atcgccggtg tgtacgatta attcgctgct
    11101 cattattttt ccttttcggt tgggattcgc acgatagcgt gcaggatagg gcttgggcat
    11161 aaaaatttca agtgggcggg cgggataata gtttttctgt accgccccaa tcgcctttgc
    11221 aaattctaaa aaacggttcg gacagtattt tatttttgaa aattactttt attatcaaag
    11281 tataaggaat gtttttgagg ctgtacagaa acgcgcgggc ggtgtatgct ccgtttaaat
    11341 agattcttaa agtatgaatg ttcaaaacca aacccgaaac cctataaaag gaacactgca
    11401 atgactgatt tttccgtttg ggaagctgct ccctttggcg caaccgttga tcatatcctg
    11461 caacgctacc acaatgtcca ccgcgcacaa tttgaagaat tggtgccgct ggcgcagaaa
    11521 gtggcccaag tccatgccga tacctttccg gcggaaattg ccgggctgct tgccgatatg
    11581 cgggacgagc tgctgatgca tatgatgaag gaagagcgga tgctgtttcc gatgattaat
    11641 cagggtgtcg gacgcggtgc ggcgatgccc atcagcgtga tgatgcacga acatgaagaa
    11701 cacgaccgcg ccatcgcacg gctcaaagag ctgaccggta atttccacgc acccgaaggg
    11761 gcttgcggaa gttggacgcg cctttacgcg ctggcaaaag aaatggcgga cgatttgaac
    11821 gaccacattc atttggaaaa cgatattctg tttgcccgcg tactcgattc ttaagggata
    11881 ggagtcggat atttcaatgc cgtctgaaat acggtttttc cgtttcagac ggcattttca
    11941 tgtttcagcc cagcaattcg ggcggaatgc ggcacacagg aatcgggttg attttgtgct
    12001 gcatcgcgcg gtgaagccgc gtatagattt ccagaacttc gcgccgccgt ccttcaaaat
    12061 cttcgggttt gcgcgtgccg tacacgccca ttgcccactc cagttcggga tagcttgcgc
    12121 ccatctgttc ctcgtcggtg cgttccgtat cccacaggcc gtcggtcggc ggggcttttt
    12181 gaatcgcctc gtccacgccc aatgcttcgg caagccggta aacctgcgtt ttggtcaggt
    12241 cggcaatcgg gctgatgtcc acgccgccgt cgccgtattt ggtaaaaaaa cccacgccga
    12301 aatcttcaac cttattacct gtccccgtaa ccagcagtcc gtgtatctgc ccgtagtagt
    12361 acagggtcag catacgcagg cggcttctgg cgttggcgag cgaaagcggc tgattggcaa
    12421 atgccgtccg atgaacgccg acggtttgct caaaggtttg gaaggtgtcg gtcagattgg
    12481 ccgtttgcgc gcttacattg gcatattgcc cttgcagatt gcggatgtgc cgccttgccc
    12541 gctcgagctg gccggggtgt tggcgtatcg gcatatccag aagcagcgtg gtgcggccgg
    12601 tgcgggcggc gagcgtggag acgacggcgg aatcgatgcc gccggaaacg cctacgacga
    12661 acccttttgc atttgcctga gcggcgtatt cgtccaacca tcggacaata tgtgtgataa
    12721 ctgcctgcgt atccattttt cctcctgtcg aaaatatccg catcatagcc tgccggcggt
    12781 gcaatttgaa tagattgagg gcgggttgat gaatattttt cccattcccc gcttaaaaaa
    12841 gtcatatagg aaaaggctgg cggcaagatg gcgcgtgtta taatattgtt gacaatttag
    12901 acggcacgat gccgccttgg gcttcaaaac atattcatat tttttattat ttgat
//
LOCUS       DAXFZM010000069        12863 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.069, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000069 DAXFZM010000000
VERSION     DAXFZM010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12863)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12863)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12863
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.069"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(205..690)
                     /gene="purE"
                     /locus_tag="ACFJAG_001617"
     CDS             complement(205..690)
                     /gene="purE"
                     /locus_tag="ACFJAG_001617"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009320 - phosphoribosylaminoimidazole
                     carboxylase complex [Evidence IEA];
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HFC3980865.1"
                     /translation="MIQIGIIMGSNSDWPVMRQAAQFLEEFGVEYEARVVSAHRTPDL
                     MFEYAETARARGIKAIIAGAGGAAHLPGMVAAKTTVPVLGVPVPSKYLRGEDSLLSIV
                     QMPKGVPVATFAIGEAGAANAALFAISMLANENPELAQKLADFRAKQEQTVLNMELEQ
                     I"
     gene            complement(738..1451)
                     /locus_tag="ACFJAG_001618"
     CDS             complement(738..1451)
                     /locus_tag="ACFJAG_001618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system YbgF family protein"
                     /protein_id="HFC3980866.1"
                     /translation="MKTKLPLFIIWLSVSASCASVLPVPEGSRTEMPTQENASDGIPY
                     PVPTLQDRLDYLEGKIVRLSNEVEMLNGKVKALEHTKIHPSGRTYVQKLDDRKLKEHY
                     LNTEGGSASAHTVETAQNLYNQALKHYQNGRFSAAAALLKGADGGDGGSIAQRSMYLL
                     LQSRARMGNCESVIEIGGRYANRFKDSPTAPEVIFKIGECQYRLQQKDIARATWRSLI
                     QTYPGSPAAKRAAAAVRKR"
     gene            complement(1451..2119)
                     /locus_tag="ACFJAG_001619"
     CDS             complement(1451..2119)
                     /locus_tag="ACFJAG_001619"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HFC3980867.1"
                     /translation="MTTHLSNVAPDLQNYLNAIGEPEHPVLTRLREKAGHHRMGKMAI
                     AREQAAVLVWLAKLIRAEKYLEIGVFTGYSSTALALALPEHGRITACDINVTFTDTAR
                     QVWNEAGVAHKISLHLQPALLTLDDLIAQGEAGSYDLALIDADKPPTPQYFERCLKLV
                     RQGGIIAIDNILLNGRVMREAAFDAPPSVKILKDFNQNLPNDTRIVPITLPVGDGLTL
                     LLKK"
     gene            complement(2130..2315)
                     /locus_tag="ACFJAG_001620"
     CDS             complement(2130..2315)
                     /locus_tag="ACFJAG_001620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3460 family protein"
                     /protein_id="HFC3980868.1"
                     /translation="MYHYQSEATQFLNRLIEEKPELAQERLKNRGLLWDVELNPEEQK
                     NFESAKVAKKPYTYYQD"
     gene            2459..4423
                     /gene="mutL"
                     /locus_tag="ACFJAG_001621"
     CDS             2459..4423
                     /gene="mutL"
                     /locus_tag="ACFJAG_001621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0032300 - mismatch repair complex
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0030983 - mismatched DNA binding [Evidence
                     IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HFC3980869.1"
                     /translation="MPRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAVD
                     VELEGGGIRLIRVGDNGGGIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLAS
                     IASVSRLTLTSRQEDSSHATQVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKF
                     LKSENTEYAHCATMLERLALAHPHIAFSLKRDGKQVFKLPAQSLHERIAAIVGDDFQT
                     ASLEIDSGNSALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLH
                     NALTPAFVLFLELPPEAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNKALADTRANLTE
                     SVSNAGEVLHDITGVTPAPMPSENDGENLFDSASNHPTGNKPDIRNAFGSSGKTAPMP
                     YQAARAPQQHSLSLRESRAAMDTYAELYKKTDNIDLELSQFEQARFGNMPSESSTNNV
                     SDGIGQASELPPLGFAIAQLLGIYILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENG
                     NLQSQHLLIPVTFAASHEECAALADHAETLAGFGLELSDMGGNTLAVRAAPVMLGKSD
                     VVSLARDVLGELAQVGSSQTIASHENRILATMSCHGSIRAGRRLTLPEMNALLRDMEN
                     TPRSNQCNHGRPTWVKLTLKELDTLFLRGQ"
     gene            4518..6641
                     /gene="dnaX"
                     /locus_tag="ACFJAG_001622"
     CDS             4518..6641
                     /gene="dnaX"
                     /locus_tag="ACFJAG_001622"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HFC3980870.1"
                     /translation="MTYQVLARKWRPKTFSDLVGQEHVVKALQNALDEGRLHHAYLLT
                     GTRGVGKTTIARILAKSLNCENAQHGEPCGVCQSCTQIDAGRYVDLLEIDAASNTGID
                     NIREVLENAQYAPTAGKYKVYIIDEVHMLSKSAFNAMLKTLEEPPEHVKFILATTDPH
                     KVPVTVLSRCLQFVLRNMTAQQVADHLAHVLDSEKIAYDPPALQLLGRAAAGSMRDAL
                     SLLDQAIALGSGKVAENDVRQMIGAVDKQYLYELLTGIVNQDGEALLAKAQEMAACAV
                     GFDNALGELAILLQQLALIQAVPSALAHDDPDSDILHRLAQTISGEQIQLYYQIAVHG
                     KRDLGLAPDEYAGFMMTLLRMLAFAPLAAASCDANAVIENTELQSPSAQTAEKETAAK
                     KPQPRPEADAAQTPVQTASAAAMPSEGKTAGPVSHQENNDVPPWEDAPDKTETAAGTA
                     RTSAKSIQTASEAETPPENQVSKNKAADNETEASLSEVPSENPIQATPNDEAVETETF
                     AHEAPAEPFYGFPDNDCPPEDGVEIPPPDWANVLPADTAGGGTDEEAEAGGIGGNNTP
                     SAPPPEFSTENWAAIVRHFARKLGAAQMPAQHSAWTEYRSDTGLMVLAMTAEARATAD
                     KKRLDKIRDTLAQAYGLQLTLQTEDWRDEAGRETPAMQDKRVQAEDRQKAQALLEADP
                     AAQKILQAFGAQWQPESLELAANRP"
     misc_feature    5707..5746
                     /gene="dnaX"
                     /locus_tag="ACFJAG_001622"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01843"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="This ribosomal frameshift element is known only in
                     the genus Neisseria; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /db_xref="RFAM:RF01843"
     gene            6722..7057
                     /locus_tag="ACFJAG_001623"
     CDS             6722..7057
                     /locus_tag="ACFJAG_001623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HFC3980871.1"
                     /translation="MFGKAGLGGLMKQAQQMQENMKKAQAKLAETEIEGEAGNGLVKI
                     TMTCAHEVRKIDISPDLIQEAADDKEMLEDLILAALKSARGKAEETANKTMGAFTQDL
                     PPGVGDFFR"
     gene            complement(7712..8758)
                     /gene="recA"
                     /locus_tag="ACFJAG_001624"
     CDS             complement(7712..8758)
                     /gene="recA"
                     /locus_tag="ACFJAG_001624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008094 - ATP-dependent activity, acting
                     on DNA [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HFC3980872.1"
                     /translation="MSDDKSKALAAALAQIEKSFGKGAIMKMDGSQQEENLEVISTGS
                     LGLDLALGVGGLPRGRIVEIFGPESSGKTTLCLEAVAQCQKNGGVCAFVDAEHAFDPV
                     YARKLGVKVEELYLSQPDTGEQALEICDTLVRSGGIDMVVVDSVAALVPKAEIEGDMG
                     DSHVGLQARLMSQALRKLTGHIKKTNTLVVFINQIRMKIGVMFGSPETTTGGNALKFY
                     SSVRLDIRRTGSIKKGEEVLGNETRVKVIKNKVAPPFRQAEFDILYGEGISWEGELID
                     IGVKNDIINKSGAWYSYNGAKIGQGKDNVRVWLKENPEISDEIDAKIRALNGVEMHIT
                     EGTQDETDGERPEE"
     gene            8958..9722
                     /gene="aroD"
                     /locus_tag="ACFJAG_001625"
     CDS             8958..9722
                     /gene="aroD"
                     /locus_tag="ACFJAG_001625"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003855 - 3-dehydroquinate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I 3-dehydroquinate dehydratase"
                     /protein_id="HFC3980873.1"
                     /translation="MHTSLTVKNTVIGSGRTKIAVPLVARDAADLSSVLSQIKNLPFD
                     IVEFRADFLECAGSIGEVLRHTQAVRDALPDKPLLFTFRRHCEGGSFPCSDDYYFELL
                     DALIESRLPDIIDIELFSGETAVRRAVANAQKNGIAALLCNHEFHRTPPQEEIVCRLK
                     QMEDCGADICKIAVMPQSSEDVLTLLSATLEAKRLVAKPVITMSMGQTGAVSRLAGQV
                     FGSSITFGSGTQNSAPGQIGVSALRAALDCLESGAD"
     gene            9742..11757
                     /gene="rep"
                     /locus_tag="ACFJAG_001626"
     CDS             9742..11757
                     /gene="rep"
                     /locus_tag="ACFJAG_001626"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006268 - DNA unwinding involved in DNA
                     replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase Rep"
                     /protein_id="HFC3980874.1"
                     /translation="MMKLNAQQLEAVRYLGGPLFVLAGAGSGKTGVITQKIKHLIVNV
                     GYLPHTVAAITFTNKAAAEMQERVAKMLPKPQTRGLTICTFHSLGMKILREEANHIGY
                     KKNFSILDSTDSAKIIGELLGGTGKEAVFKAQHQISLWKNDLKTPEDVVQTASNVWEQ
                     QTARVYASYQETLQSYQAVDFDDLIRLPAVLLQQNSEVRNKWQRRLRYLLVDECQDTN
                     TCQFALMKLLTGAEGMFTAVGDDDQSIYAWRGANMENLRKMQENYPQMKVIKLEQNYR
                     STARILKIANKVIENNPKLFTKKLWSQLGEGEPVKVVACQNEQHEADWVVSQIVKQKL
                     IGGDKTRYADFAVLYRGKHQARIFEEALRGARIPYRLSGGQSFFDKAEIKDVLSYVRL
                     LANPNDDPAFLRAVTTPKRGIGDVTLGKLNAYAHEHECSLYEAAQNEEALATLNNTNR
                     QHLQAFMDMFGNYRAKAEIDEAGEFINSLLEEIDYENHLMQNEEGKAGEIKWRNVGEL
                     VSWFARKGERDGKNVIELAQTVALMTLLEGKDEEETDAVSLSTLHAAKGLEYPYVFLV
                     GCEEGVLPHNDSIEEGNVEEERRLMYVGITRAKRQLTLTHCVKRKKQGIWQFPEPSRF
                     IDEMPQEDLKILGRKGGEPIVSKEEGRRNLADIIGRIDNLKKSGPAD"
     gene            complement(11827..12861)
                     /gene="dinB"
                     /locus_tag="ACFJAG_001627"
     CDS             complement(11827..12861)
                     /gene="dinB"
                     /locus_tag="ACFJAG_001627"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003821936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HFC3980875.1"
                     /translation="MDMDAFYASVELREQPHLKGRPVVVAWEGARSVICAASYDARQF
                     GLHSAMSVATAKRLCPQAVYVPPHFDLYRQVSAQIHAVFRRYTDLIEPLSPDEAYLDV
                     TRNFKNIPYAGEVAKEIRAAIFAETGLTASAGIAPNKFLAKIASDWRKPNGQFVLPPH
                     KVMAFLETLPLGKIPGAGKVTLKKMQSLGMRTAGDLRRFERGELLNHFGRYGYRLYDL
                     ARGTDEHPVKAERERLQISTEITLPEDLPLGQAAGHLPHLAEDLWRQITRKNVEAQSV
                     TLKLKTYDFRIITRTLTYSSVLPDCAALLQAAQMLMARVPPQTEDAFRLIGIGVGRLV
                     PKNQQQDLWA"
BASE COUNT         3094 a         3782 c         3366 g         2621 t
ORIGIN      
        1 tgtactgtct gcggcttcgt cgccttgtcc tgatttaaat ttaatccact atatatttca
       61 aaaattgaaa cccgcacaga ttgttaaacc ccaaaacagg ggcgggcgaa attcttccgg
      121 caatgggttc atgcaaacaa aatgccatct gaaccccgaa aacagggctt cagacggcat
      181 ttgtgtattc gcggacggcg ggttttaaat ctgttccaat tccatgttta aaacggtttg
      241 ttcctgtttg gctcggaagt ctgccagttt ttgcgccagt tcggggtttt cgttggcgag
      301 catggagatg gcgaacaatg cggcatttgc cgcgcctgcc tcgccgatgg cgaatgtggc
      361 gacgggtacg cctttgggca tttgtacaat cgataaaagc gaatcttcgc cgcgcaggta
      421 tttgcttggg acgggtacgc ccaaaacggg gacggtggtc ttggcggcaa ccatgccggg
      481 taaatgcgcc gcgccgcccg cacccgcgat gatggctttg atgccgcgcg cccgtgcggt
      541 ttcggcgtat tcaaacatca aatccggagt gcggtgtgcg gaaacgacgc gcgcctcata
      601 ttctacgccg aactcttcaa gaaactgcgc tgcctgccgc ataacgggcc aatcgctgtt
      661 gctgcccatg atgatgccga tttgtatcat aaatccttct tggtgcggat ggggtaaaaa
      721 gcggaaaaat ggaaaaacta tcgtttgcgt acggctgcgg cggcgcgttt tgccgccggg
      781 ctgccgggat aggtctgtat caggctgcgc caagtcgccc ttgcaatgtc tttttgctga
      841 agcctgtatt ggcattcgcc gattttgaat atgacttcgg gcgcggttgg gctgtctttg
      901 aaacggttgg cgtaacgccc tccgatttcg atgacagatt cacagttccc catacgcgcc
      961 ctgctttgca gcaacaggta catactgcgt tgcgcgatgc tgccgccgtc tccgccgtcc
     1021 gcccccttca acaaggcggc tgcggcagaa aacctgccgt tttgatagtg tttgagtgcc
     1081 tgattgtaga ggttttgtgc ggtttcgacg gtatgtgcgg atgcgctgcc gccttcggta
     1141 ttgaggtaat gctctttcaa tttgcggtcg tcgagttttt ggacgtatgt cctgccggaa
     1201 gggtgtattt tcgtatgctc caatgctttg actttcccgt ttaacatttc cacttcgttc
     1261 gacagccgga cgattttgcc ttccagatag tccaaacggt cttgcagagt gggaacggga
     1321 tagggaatgc cgtctgaagc attttcctgt gtcggcattt cggttcggct gccctccgga
     1381 acgggtaaaa cggaagcaca ggaggcagac acagacagcc aaatgataaa aagcggtaat
     1441 ttggtcttca ttattttttc agaagcaggg tcaaaccgtc gccgacgggc agggtgatgg
     1501 ggacaatccg cgtatcgttc ggcaggtttt gattgaaatc tttgagaatt ttgacactgg
     1561 gcggcgcatc aaaagccgct tcgcgcatca cccttccgtt caacaaaata ttgtcgatgg
     1621 cgatgatgcc gccttgccgg acgagtttga ggcaacgctc gaaatattgc ggcgtgggcg
     1681 gtttgtctgc gtctatcagt gccaaatcgt agcttccggc ttcaccctgt gcaatcaaat
     1741 catccaatgt cagcaatgcg ggttgcaggt gcaggctgat tttatgcgcc acaccggcct
     1801 cgttccaaac ctgacgcgcc gtatcggtaa aggttacatt gatgtcgcag gcggtaatcc
     1861 gcccgtgttc gggcagcgcc aatgcaagcg cggtgctgct gtatccggta aatacgccga
     1921 tttccagata tttttccgcg cgaatcagct ttgccagcca aaccaaaacc gccgcctgtt
     1981 cgcgcgcaat cgccattttg cccatacggt gatgcccggc cttctcacgc agccgcgtca
     2041 aaacgggatg ttcgggttcg ccgatggcat tcaaatagtt ttgcaggtcc ggtgcgacat
     2101 tggacagatg ggtcgtcatt tcggcgggtt cagtcttggt aataggtata aggttttttc
     2161 gccacttttg ccgattcaaa gtttttttgc tcttcgggat tgagttcgac atcccacaaa
     2221 agccctcgat ttttcaaacg ttcttgcgcc aattcaggtt tttcttcgat caggcggttg
     2281 aggaattgtg tggcttcgga ttggtagtgg tacatctttg cgctccaatt ttacgggata
     2341 cggcgtgatt atactggtat tttccaaacg ggataaacgg cttttatcaa gaatacgggc
     2401 agaaagataa ggggttttat tatagaataa ggcgtttttt gcaacggaag accgccttat
     2461 gccacgcatt gccgccctgc ccgaccacct cgtcaaccaa attgccgccg gcgaagtggt
     2521 cgaacgccct gccaacgccc tgaaagaaat cgttgaaaac agcatagacg cgggcgcaac
     2581 ggcggttgat gtggaactgg aaggcggcgg catccgcctc atccgcgtcg gcgacaacgg
     2641 cggcggcatc caccccgacg acatcgaact cgcgctccac cgccacgcca ccagcaaaat
     2701 caaaaccctg aacgatttgg aacacgttgc cagcatgggc tttcgcggcg aaggcttggc
     2761 cagtatcgcc tccgtcagcc gcctgaccct gaccagccgc caagaagaca gttcgcatgc
     2821 gacccaagtc aaagccgaag acggcaaact cagcagcccc accgccgccg cccaccccgt
     2881 cggcaccacc atcgaagccg ccgaactctt cttcaacacc cccgcgcggc gcaagttcct
     2941 caaatccgaa aacaccgaat acgctcactg cgccaccatg ctcgaacgcc tcgcgctggc
     3001 gcatccgcac attgccttct cactcaaacg cgacggcaaa caagtgttca aacttcctgc
     3061 ccaaagcctg catgaacgta tcgccgccat tgtcggcgat gattttcaga cggcatcttt
     3121 ggaaattgac agcggcaata gcgcgctgcg gctctatggc gcgattgcca agccgacttt
     3181 cgccaaaggc aaaaccgata aacaatattg cttcgtcaac catcgttttg tccgcgacaa
     3241 agtcatgctc catgccgtca agcaggcata ccgcgacgta ttgcacaacg cactgacacc
     3301 tgctttcgtc cttttcctcg agctgccgcc cgaagccgtg gatgtcaacg tccacccgac
     3361 caaaaccgaa atccgcttcc gcgacagccg gcaagtacac caactcgtgt tccacacgct
     3421 caacaaagcc cttgccgaca cacgcgccaa cctgaccgaa agcgtcagca acgcaggcga
     3481 agtgttgcat gacattaccg gcgttacgcc tgccccaatg ccgtctgaaa acgacggcga
     3541 aaatctgttt gatagcgcat ccaaccaccc gacaggcaac aaacccgata tacgcaatgc
     3601 ctttggttca tcaggtaaaa ccgcgcccat gccttaccag gccgcgcgtg cgccgcaaca
     3661 acacagcctg tccctgcgcg aaagccgcgc ggcaatggac acctatgccg aactctacaa
     3721 aaaaaccgac aacatcgacc ttgagttgag ccaattcgaa caggcacgtt tcggcaatat
     3781 gccgtctgaa agcagcacga acaacgtttc agacggcatc ggacaggctt cagaactgcc
     3841 gccgctcggt ttcgccattg cccaactatt aggcatctac attcttgccc aagccgaaga
     3901 cagcctgttg ctcatcgata tgcacgccgc tgccgaacgc gtcaactacg agaaaatgaa
     3961 acgccaacgt caggaaaacg gcaacctgca aagccagcac ctgcttattc ccgtaacctt
     4021 tgccgcgtcc cacgaagaat gcgccgccct cgccgatcat gccgaaacgc tggcaggctt
     4081 cggcctggaa ctgtccgaca tgggcggcaa caccctcgcc gtccgcgccg cgcccgtaat
     4141 gttgggcaaa tccgatgtcg tctccctcgc acgcgacgta ttgggcgaac tcgcccaagt
     4201 cggcagcagc caaaccatcg catcacacga aaaccgcatc ctcgccacaa tgtcctgcca
     4261 cggctcaatc cgcgccggcc gcaggctcac cctgcccgaa atgaacgcgc tgctgcgcga
     4321 tatggaaaat acgccgcgca gcaaccagtg caaccacggc aggccgacgt gggtcaaact
     4381 gactttgaaa gaattggaca cactgttctt gcgcggacag taagccgaaa atgctagaat
     4441 acgccgcccg aagccgccgt tcagacggca ttccgacgca ccgacagaaa catcacgacc
     4501 gaaaccaaga gaaaaacatg acctatcaag ttctcgcccg aaaatggcgg cccaaaacct
     4561 tttccgactt agtcggtcag gaacacgtcg tcaaagccct gcaaaatgcc ttggacgaag
     4621 gcaggctgca ccacgcctac ctgctgaccg ggacgcgcgg cgtgggcaaa accaccatcg
     4681 cccgcatcct tgccaaaagc ctcaactgcg aaaatgcgca acacggcgaa ccttgcggcg
     4741 tgtgccaaag ctgcacccaa atcgatgccg gacgctatgt cgacctgctc gaaatcgacg
     4801 ccgcctccaa cacaggcatc gacaacatcc gcgaagtctt ggaaaacgcc caatacgcgc
     4861 cgaccgccgg caaatacaaa gtctatatca tcgacgaagt gcatatgctt tccaaaagcg
     4921 cgttcaacgc catgctcaaa acgctggaag agccgcccga acacgtcaaa ttcatcctcg
     4981 ccaccaccga tccgcacaaa gtccccgtta ccgtattaag ccgctgcctg caattcgtct
     5041 tacgcaatat gaccgcgcaa caggttgccg accaccttgc ccacgtcctc gacagcgaaa
     5101 aaatcgccta cgaccccccc gccctgcaac ttttgggacg tgccgccgcc ggatcgatgc
     5161 gcgatgcctt aagcctgctc gaccaagcca tcgccctagg ttcgggcaaa gttgccgaaa
     5221 acgatgtccg ccaaatgatc ggcgcggttg acaaacaata cctgtacgaa ctgctgacag
     5281 gcatcgtcaa ccaagacggc gaagccctgc tggcaaaagc gcaggaaatg gcggcgtgtg
     5341 ccgtcggctt tgacaacgcc ttgggcgaac tggccatact gctgcaacaa ctcgccctga
     5401 tacaggcagt cccctccgcc ttggcgcacg acgaccccga ttccgatatt ttgcaccgcc
     5461 tcgcccaaac cataagcggc gaacaaatcc agctttacta ccaaatcgcc gtccacggca
     5521 aacgcgacct gggcctcgcc cccgacgaat acgccggctt tatgatgacc ctgctgcgta
     5581 tgctggcgtt cgcccccttg gcggcggctt cgtgtgatgc aaacgccgtg attgaaaata
     5641 ccgaacttca atccccgtcg gcacaaaccg ccgaaaagga aaccgccgca aaaaagccac
     5701 aaccgcgccc tgaagcggat gccgcccaaa cgcccgttca gacggcatcc gcagcagcaa
     5761 tgccgtctga aggcaaaact gccggccccg tttcccatca agaaaacaac gatgttccgc
     5821 cttgggaaga cgcgccggac aaaaccgaaa ccgcagccgg cacggcgcga acgtcggcaa
     5881 aaagcattca gacggcatcc gaagccgaaa cgccgcccga aaatcaagtt tccaagaaca
     5941 aggcagccga caacgaaacc gaggcttcct tgtccgaagt gccgtctgaa aaccccattc
     6001 aggcaacacc gaatgatgaa gccgttgaaa cggaaacatt tgcacacgaa gcccctgcag
     6061 aacctttcta cggttttccg gataatgact gccccccgga agacggcgtg gaaatcccgc
     6121 cgcccgattg ggcaaatgtc ctccctgccg ataccgcagg cggagggacg gacgaagaag
     6181 cagaagcagg cggcatcggc ggaaacaaca cgccgtccgc cccgccgccc gaattttcca
     6241 ccgaaaactg ggcagccatc gtccggcact tcgcccgcaa actcggcgcg gcgcaaatgc
     6301 cggcgcaaca ctccgcgtgg acggaatacc gttccgacac cggactgatg gttttggcaa
     6361 tgaccgccga agcccgcgcc accgccgaca aaaagcggct cgacaaaatc cgcgacaccc
     6421 tcgcccaagc ctacgggctg caactcaccc tgcaaaccga agactggcgc gacgaagccg
     6481 gccgggaaac ccccgcgatg caggacaagc gtgtccaagc cgaagacagg caaaaagcac
     6541 aagcattgct cgaagccgac cccgccgcac aaaaaatcct ccaagcattc ggcgcgcaat
     6601 ggcagcccga atcactggaa ttggcggcaa accggccata aacagatata atgccgcccg
     6661 aacccttcgg acggcattgc cgcttccctc attcattcaa acacaaacag gagtattcag
     6721 tatgttcgga aaagccggat taggcggcct gatgaaacag gcgcagcaaa tgcaggaaaa
     6781 catgaaaaag gcacaagcca aacttgccga aaccgaaatc gaaggcgaag caggcaacgg
     6841 cttggtcaaa atcacaatga cctgcgcgca cgaagtacgc aaaatcgaca tcagccccga
     6901 tttgattcaa gaagccgccg atgacaaaga aatgctcgaa gacctcatcc tcgccgccct
     6961 caaatccgcc cggggcaaag ccgaagaaac cgcaaacaaa acaatgggcg cattcaccca
     7021 agatctgccc cccggcgtgg gcgacttctt ccgctgaccc cgaccgtcat tcccgcgaac
     7081 gcgggaatcc ggtaaccgaa aaaccacagg aatctatcgg aaaaaaaaac aaaaaccccc
     7141 gccgccgtca ttcccgcgca ggcgggaatc tagaacgtag aatctgaaaa accgttttac
     7201 tcgataaatt tccgtgccga caggtctgga ttcccgcctt cgcgggaatg acggcatatt
     7261 ttttgcattt gatataaagg gtcgtttgaa ttttgttcag caagtgcaaa gtattgcaca
     7321 taaaagggcg caggcttcat ccgtaaagtc ggcgcaggat agaggcaaag cgggcgtagg
     7381 tcgggctgta gcaactgtat ttttcacccc gtcgggtaaa aatatagtgg attaacaaaa
     7441 accggtacgg cgttgcctcg ccttagatca aagagaacga ttctctaaga tgctgaagca
     7501 ccaagtgaat cggttccgta ctatagtgga ttaaatttaa accagtacgg cgttgcctcg
     7561 ccttgccgta ctatttgtac tgtctgcggc tctccgcctt gtcctgattt ttgttaatcc
     7621 gctataccaa aactcaaatc aagccgtccg gaggcggctc aaaaaaaacg gtacttcgca
     7681 gcagaagtac cgtttatcgg gatttcaggt tttattcttc gggtcgttcg ccgtcggttt
     7741 cgtcctgcgt cccttcggtg atgtgcattt ctacgccgtt gagggcgcgg atttttgcgt
     7801 cgatttcgtc ggaaatttcg gggttttctt tcagccagac gcggacgttg tctttgccct
     7861 gaccgatttt cgcgccgttg tagctgtacc acgcgccgga tttgttgatg atgtcgtttt
     7921 tcacgccgat gtcgatcaat tcgccttccc aactgatgcc ttctccgtag aggatgtcaa
     7981 actctgcctg acggaacggg ggggcgactt tgtttttgat gactttgacg cgggtttcgt
     8041 tgcccaatac ttcttcgcct tttttgatgg atccggtgcg gcggatgtcg aggcggacgg
     8101 aagaatagaa tttcagcgcg ttgccgccgg tcgtggtctc ggggctgccg aacattacgc
     8161 cgatcttcat tcggatttgg ttgatgaaca caaccagcgt attggttttt ttgatgtgtc
     8221 cggtcagttt gcgcaaagcc tgactcatca ggcgcgcctg cagtccgacg tggctgtccc
     8281 ccatatcgcc ttcgatttcg gctttgggga cgagtgcggc tacggaatcg acgactacca
     8341 tatctatgcc gcccgaacgg acgagcgtgt cgcagatttc caaagcctgt tcgccggtat
     8401 cgggctggga caggtaaagc tcttcgactt ttacgccgag tttgcgggcg taaacgggat
     8461 cgaaggcgtg ttcggcatcg acaaaggcgc acacgccgcc gtttttctgg cattgggcga
     8521 cggcttcgag gcagagtgtg gttttgccgg aggattcggg gccgaagatt tcgacgatgc
     8581 gcccgcgcgg caggccgccg actccgaggg cgaggtctaa tccgagcgat ccggtggaaa
     8641 tgacttcgag gttttcttcc tgctggctgc cgtccatttt catgatggcg cctttgccga
     8701 aacttttttc gatttgcgcc agtgcggcgg caagggcttt gcttttgtcg tctgacatgg
     8761 gggttactcc ggaacaaatg cggtatgtgg gctgcggcgc aacacgggct gcggcgcgga
     8821 atatgaatcg gtcggtcatt atcgcatgtt tgcctttcgg gggctaccat ccgcttcaga
     8881 ccgaatgccg tctgaaacat tgtccctcct ttgctataat ggcgccctta cttttcccgc
     8941 cagccgcttg aaccgccatg cacaccagcc tgaccgtcaa aaataccgtt atcggaagcg
     9001 ggcgcaccaa aatcgccgtg ccgcttgtcg cccgagatgc cgccgattta tcctccgtgc
     9061 tgtcccaaat caaaaacctg cccttcgata tcgtcgagtt ccgcgccgac tttttggaat
     9121 gcgcgggcag catcggcgaa gtattgcgcc acacgcaggc cgtccgcgac gcgctgcccg
     9181 acaaaccgct gctgtttacg ttcagacggc attgcgaagg cggctcgttc ccgtgttcgg
     9241 acgattatta ttttgaactg ctcgacgcgc tgatcgaaag ccgcctgccc gacattatcg
     9301 atatcgagct gttttccggc gaaaccgccg tccgccgcgc cgtggcaaat gctcaaaaaa
     9361 acggcatcgc cgccctgctc tgcaatcatg agtttcaccg cacgccgccg caagaagaaa
     9421 tcgtatgccg tctgaaacag atggaggact gcggcgcgga catctgcaaa attgcggtga
     9481 tgccgcaaag ctcggaagat gtgctgactt tgctttccgc cacgctcgaa gcgaaacggc
     9541 ttgtcgccaa accggttatt acgatgtcga tggggcagac gggtgcggtc agccggcttg
     9601 ccggacaggt gttcggctca agcatcacgt tcggttcggg aacgcaaaac tccgcgccgg
     9661 ggcaaatcgg cgtatccgcc ctccgtgcgg cactcgactg cctcgaaagc ggcgcagact
     9721 gatttcagac ggcatcaaaa catgatgaaa ctcaatgccc aacagctcga agccgtccgc
     9781 tacctcggcg gccccctgtt cgtccttgcc ggcgcaggca gcggcaaaac cggcgtgatt
     9841 acgcaaaaaa tcaagcattt gattgtcaat gtcggctatc tgccgcatac cgtcgccgcg
     9901 attaccttta ccaacaaagc cgctgcggaa atgcaggagc gcgtcgccaa aatgctgccc
     9961 aaaccgcaaa cgcgcgggct gacgatttgc acgttccatt ctttgggcat gaagattctg
    10021 cgcgaagagg cgaaccatat cggttacaaa aaaaacttct ccattctcga ctctaccgac
    10081 agcgccaaaa tcatcggcga actcttaggc ggcacgggaa aagaagccgt attcaaggcg
    10141 cagcaccaga tttccctttg gaaaaacgat ttaaaaacgc ctgaagatgt cgttcagacg
    10201 gcctctaatg tgtgggaaca acaaaccgcg cgcgtgtatg caagttatca ggaaaccctg
    10261 caaagctatc aggcagtaga ttttgacgac ttaatccgcc tgcctgccgt gctgttgcag
    10321 caaaacagtg aagtgcgcaa caaatggcag cggcggctgc gttatctgtt ggttgacgaa
    10381 tgccaagata cgaatacctg ccaatttgcg ctgatgaaac tcttgacagg cgcggaaggg
    10441 atgtttaccg ccgtcggcga cgacgaccag tccatctacg catggcgcgg cgcgaacatg
    10501 gaaaacctgc gcaaaatgca ggaaaactat ccgcagatga aggtcatcaa actggagcaa
    10561 aactaccgct ccaccgcgcg gattctcaaa attgccaaca aagtcatcga aaacaacccc
    10621 aagctgttta ccaaaaaact ttggtcgcaa ttgggcgaag gcgagccggt taaagtcgtt
    10681 gcctgccaaa acgagcagca cgaagccgat tgggtcgtca gccaaatcgt caaacaaaaa
    10741 ctcatcggcg gcgacaaaac ccgatacgcc gattttgccg tgttataccg cggcaagcat
    10801 caggcacgga ttttcgagga agcattgcgc ggcgcgcgca tcccctaccg tctctccggc
    10861 ggacaaagct ttttcgacaa agccgaaatc aaagacgtgt tgtcttatgt gcggctgctt
    10921 gccaacccca acgacgatcc cgcctttctg cgcgccgtta ccacgccaaa acgcggcatc
    10981 ggcgatgtaa cgctgggcaa actcaacgcc tacgcgcacg aacacgaatg cagcctgtat
    11041 gaagccgcac aaaacgaaga agcccttgcc acactgaaca ataccaaccg ccaacacctg
    11101 caagccttta tggatatgtt cggcaactac cgcgccaaag ccgaaatcga cgaagcgggc
    11161 gagttcatca acagcctgct cgaagaaatc gactatgaaa accatttgat gcaaaacgaa
    11221 gaaggcaaag ccggcgaaat caaatggcgc aacgtcggcg agttggtatc gtggttcgca
    11281 cgaaaaggcg aacgggacgg caaaaacgtc atcgaactcg cccaaaccgt cgccttgatg
    11341 acgcttttgg aaggaaaaga cgaagaagaa accgatgccg tctcgctatc cacgctgcac
    11401 gccgccaaag gtttggagta tccgtatgtt ttccttgtcg gttgcgaaga aggtgttttg
    11461 ccgcacaacg acagcatcga agaaggcaac gtcgaagaag aacgccgcct gatgtacgtc
    11521 ggcatcaccc gtgccaaacg ccaactcacg ctgacccact gtgtcaaacg caaaaaacaa
    11581 ggcatatggc aattccccga acccagccga ttcatagacg aaatgccgca ggaagatttg
    11641 aaaatcctgg ggcgcaaagg cggcgaaccg attgtcagca aagaagaagg cagacgtaac
    11701 cttgccgata taatcggaag gatcgacaac ctaaaaaaaa gcggcccggc ggattaaacc
    11761 ggagccgcaa tgccgtctga aagacgttca gacggcatat tttttgaacg gcgcgcgtca
    11821 agcggtttac gcccacaaat cctgctgctg atttttcggt acaagcctgc cgacaccgat
    11881 accgatgagg cggaacgcgt cttccgtctg cggcgggacg cgcgccatca acatttgcgc
    11941 agcctgcagc agagctgcgc agtcgggcaa tacggaggaa taagtcagcg tgcgcgtgat
    12001 gatgcggaaa tcgtaggtct tcagcttgag cgttacgctt tgggcttcga cgtttttgcg
    12061 cgtgatttgc cgccacaggt cttcggcaag atggggcagg tgtccggcag cctgcccgag
    12121 cggcaggtct tcgggcaggg tgatttctgt ggaaatttgg aggcgttcgc gttcggcttt
    12181 gacggggtgt tcgtccgtac cgcgcgccaa atcatagagg cggtagccgt agcgtccgaa
    12241 atggtttaag agctcgccgc gctcgaaacg gcgcaaatcg cccgccgtcc gcatacccag
    12301 cgactgcatt tttttcagcg ttaccttgcc cgctccgggg attttgccca aaggcagggt
    12361 ttccaaaaat gccataactt tgtgcggcgg caacacaaac tgcccgttcg gcttgcgcca
    12421 gtcggaagca attttcgcca gaaatttgtt cggcgcgatg cctgcggatg cggtcaaacc
    12481 cgtttccgca aaaatggcgg cacggatttc tttggcaact tcgccggcgt aagggatatt
    12541 tttgaaatta cgggtaacgt caagataggc ttcgtccggc gacaggggtt cgattaaatc
    12601 ggtataacgt ctgaatacgg cgtgaatctg cgcagaaacc tgacggtaca aatcgaaatg
    12661 cggcggcaca tacaccgctt gcggacacag ccttttcgcc gttgccaccg acatcgcgga
    12721 atgcagcccg aactgccgtg catcatacga tgcggcacaa atcaccgaac gcgcgccctc
    12781 ccacgcgacg accaccggcc gccctttcaa atgcggctgt tcgcgcagtt ctaccgatgc
    12841 gtagaacgcg tccatatcga tgt
//
LOCUS       DAXFZM010000070        12226 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.070, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000070 DAXFZM010000000
VERSION     DAXFZM010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12226)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12226)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12226
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.070"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..1246
                     /locus_tag="ACFJAG_001628"
     CDS             <1..1246
                     /locus_tag="ACFJAG_001628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HFC3980876.1"
                     /translation="TAPVPTCNMSGNPINLHKLTFIMLLPSPEARQSSLNLQTLIAEE
                     IGKHGNWIPFSRFMELVLYAPQYGYYTGGSHKIGNTGDFITAPTLTPLFAQTLARQLQ
                     ELLPQTAGNIYEFGAGTGQLAADLLGSVSDSINCYYIIEISPELAARQKNLIQARAPE
                     ASQKVVHLTALPEAFDGIIIGNELLDAIPVEIVRKNEGGLLEHIGVCTDNGRFAYSAR
                     PLHDPSLSTSASLYFPQTDYPYTSELHPQQYAFIRTLASRLERGGMIFIDYGFDAAQY
                     YHPQRNQGTLIGHYRHHVIHNPFDFIGLADLTAHVNFTDIAQAGTDAGLDLTGYLPQS
                     HFLLNLGITELLAQTGKTDSAAYIREAAAVQKLIDQHEMGELFKVIAFGKNIGIDWAG
                     FRFGDICHKLQPSCRLNPLQTA"
     gene            1342..1418
                     /locus_tag="ACFJAG_001629"
     tRNA            1342..1418
                     /locus_tag="ACFJAG_001629"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1376..1378,aa:Met,seq:cat)
     gene            1426..1501
                     /locus_tag="ACFJAG_001630"
     tRNA            1426..1501
                     /locus_tag="ACFJAG_001630"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1459..1461,aa:Ala,seq:ggc)
     gene            complement(1687..2508)
                     /locus_tag="ACFJAG_001631"
     CDS             complement(1687..2508)
                     /locus_tag="ACFJAG_001631"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0050380 - undecaprenyl-diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0016311 - dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HFC3980877.1"
                     /translation="MDFLIVLKALMMGLVEGFTEFLPISSTGHLIVFGNLIGFHSNHK
                     VFEIAIQLGAVLAVVFEYRQRFSNVLHGVGKDRKANRFVLNLAIAFIPAAVMGLLFDK
                     QIKEYLFNPLSVAVMLVLGGFFILWVEKRQSRAEPKIADVDALRPIDALMIGVAQVFA
                     LVPGTSRSGSTVMGGMLWGIERKTATEFSFFLAVPMMVAATAYDVLKHYRFFTLHDVG
                     LILIGFIAAFVSGLVAVKALLKFVSKKNYIPFAYYRIVFGIVIIILWLSGWISWE"
     gene            complement(2541..3185)
                     /locus_tag="ACFJAG_001632"
     CDS             complement(2541..3185)
                     /locus_tag="ACFJAG_001632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HFC3980878.1"
                     /translation="MKFKHLLPLLLSAVLSAQAYALTEGEDYLVLDKPIPQEQPGKIE
                     VLEFFGYFCVHCHHFDPLLLKLGKALPSDTYLRTEHVVWRPEMLGLARMAAAVKLSGL
                     KYQANSAVFKAVYEQKIRLENRAVAGKWALSQKGFDGKKLMRAYDSPEAAAVALKMQK
                     LTEQYGIDSTPTVIVGGKYRVIFNNGFDGGVHTIKELVAKVREERKRQTPAVQK"
     gene            complement(3188..4051)
                     /gene="ftsN"
                     /locus_tag="ACFJAG_001633"
     CDS             complement(3188..4051)
                     /gene="ftsN"
                     /locus_tag="ACFJAG_001633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsN"
                     /protein_id="HFC3980879.1"
                     /translation="MNKFSQSGKGLSGFFFGLILATVIIAGILLYLNQGGQNAFKIPA
                     PSKQPAETEILKLKNQPKEDIQPEPADQNALSEPDVAKEAEQSDAEKAADKQPVADKA
                     DEVEEKAGEPEREEPDGQAVRKKALTEEREQTVREKAQKKDAETVKKQAVKPSKETEK
                     KASKEEKKAAKEKVAPKPTPEQILNSGSIEKARSAAAKEVQKMKTFGKAEATHYLQMG
                     AYADRRSAEGQRAKLAILGISSEVVGYQAGHKTLYRVQSGNMSADAVKKMQDELKKHG
                     VASLIRAIEGK"
     gene            complement(4157..5653)
                     /locus_tag="ACFJAG_001634"
     CDS             complement(4157..5653)
                     /locus_tag="ACFJAG_001634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HFC3980880.1"
                     /translation="MSLALVYSRALSGMNAPLVEVEAHLANGLPHFNIVGLPDTEVKE
                     SRDRVRAAIIQSGFEFPAKKITVNLAPADLPKESGRFDLPIAIGILAASGQVAPEKLA
                     EYEFAGELALSGLLRPVRGALAMAWQGMQAKRAFVLPEENAGQAAVMRGITVYGARSL
                     GEVAAHLNGIEPLAQTECSVPQMPSEHGGQPDLCDVKGQHTARLALEIAAAGGHSLLM
                     MGPPGTGKSMLSQRLPGILPPLAEDELVEVWALRSLLPNHQQQLDSNRPFRSPHHSAS
                     AAAMVGGGSDPRPGEISLAHHGVLFLDELPEFDRKVLEVLREPLENGEIHISRAARQA
                     VYPAKFQLVAAMNPCPCGYLGHPVKPCRCTPESVARYRSKISGPLLDRIDLTIEVPSL
                     SAAELMQQEAGESSASVLERVIAARGKQYARQGKVNAALSVSELDSQACIQKEAQEAL
                     GSLLEKLSLSARSFHRIMRVARTLADLAGDEEVGRSHVMKAIGFRRAL"
     gene            complement(5667..5987)
                     /locus_tag="ACFJAG_001635"
     CDS             complement(5667..5987)
                     /locus_tag="ACFJAG_001635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003763371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory factor UbiK family protein"
                     /protein_id="HFC3980881.1"
                     /translation="MFGKQLFEEVGSKISETIANSPAKDVEKNIKAMLGGAFNRMDLV
                     TREEFDIQQQVLIKTRTKLAALEARLAKLEAAQNPERAALEAAEAAAEEAVAEIRQQT
                     EAGE"
     gene            6475..8001
                     /gene="putP"
                     /locus_tag="ACFJAG_001636"
     CDS             6475..8001
                     /gene="putP"
                     /locus_tag="ACFJAG_001636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005298 - proline:sodium symporter
                     activity [Evidence IEA];
                     GO_function: GO:0031402 - sodium ion binding [Evidence
                     IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:0015824 - proline transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proline symporter PutP"
                     /protein_id="HFC3980882.1"
                     /translation="MNPMYITFAIYLVAVLLIGLAAYFSTRNFDDYILGGRSLGPFVT
                     AMSAGASDMSGWLLMGLPGAIYLSGLNEAWIAIGLLVGAYFNWLLVAGRLRVHTEYAN
                     NALTLPDYFFHRFGAGGHLMKVVSALIILFFFTIYCASGIVAGATLFQSLFEGMTYNQ
                     AMWLGAGATIAYTFLGGFLAVSWTDTLQASLMIFALILTPVMVYLGLGGAEQMSAAIQ
                     SVAAGTGKEYGSLFAGTTVIGIISTAAWGLGYFGQPHILARFMAAESAKSLVSARRIG
                     MTWMALCLAGAVAVGYFGIAYFGANPDKVSSMSGNHERIFIALSTLLFNPWIAGIILS
                     AILAAVMSTLSCQLLVCSSAITEDFYKGFLRKNAQQSELVWVGRLMVLAIAVISILIA
                     SDPNSKVLGLVSYAWAGFGAAFGPIVILSVLWKRITAYGALSGMVAGASTVVVWAEWV
                     KKPARAAGESGLLTMYEIVPGFIVCLIVAVLVSLFNKEPSREIQERFEKADADYRAAR
                     "
     gene            8253..11858
                     /gene="putA"
                     /locus_tag="ACFJAG_001637"
     CDS             8253..11858
                     /gene="putA"
                     /locus_tag="ACFJAG_001637"
                     /EC_number="1.2.1.88"
                     /EC_number="1.5.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0003842 - 1-pyrroline-5-carboxylate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0004657 - proline dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0010133 - proline catabolic process to
                     glutamate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional proline dehydrogenase/L-glutamate
                     gamma-semialdehyde dehydrogenase PutA"
                     /protein_id="HFC3980883.1"
                     /translation="MFHFAFPAQTALRQAITDAYRRNEIEAVQDMLQRAQMSDEERNA
                     ASELARRLVTQVRAGRTKAGGVDALMHEFSLSSEEGIALMCLAEALLRIPDNATRDRL
                     IADKISDGNWKSHLNNSPSLFVNAAAWGLLITGKLTATNDKQMSSALGRLIGKGGAPL
                     IRQGVNYAMRLLGKQFVTGQTIEEALQNGKEREKMGYRFSFDMLGEAAYTQADADRYY
                     RDYVEAIHAIGKDAAGQGVYEGNGISVKLSAIHPRYSRAQHGRVMGELLPRLKELFLL
                     GKKYDIGINIDAEEANRLELSLDLMEALVSDPDLAGYKGIGFVVQAYQKRCPFVIDYL
                     IDLARRNNQKLMIRLVKGAYWDSEIKWAQVDGLNGYPTYTRKVHTDISYLACARKLLS
                     AQDAVFPQFATHNAYTLGAIYQMGKGKDFEHQCLHGMGETLYDQVVGPQNLGRRVRVY
                     APVGTHETLLAYLVRRLLENGANSSFVNQIVDENISIDRLIKSPFDTIAEQGIHLHNA
                     LPLPRDLYGKCRLNSQGVDLSNENVLQQLQEQMNKAAAQDFHAASIVNGKARDVGEAQ
                     PIKNPADHGDVVGTVSFADAALAQEAVGAAVAAFPEWSATPAAERAACLRRFADLLEQ
                     HTPALMMLAVREAGKTLNNAIAEVREAVDFCRYYANEAEHTLPQDAKAVGAIVAISPW
                     NFPLAIFTGEVVSALAAGNTVIAKPAEQTSLIAGYAVSLMHEAGIPTSALQLILGAGD
                     TGAALTNDASIGGVIFTGSTEVARLINKALAKRGDNPVLIAETGGQNAMIVDSTALAE
                     QVCADVLNSAFDSAGQRCSALRILCVQEDVADRMLDMIKGAMDELVVGKPIQLTTDVG
                     PVIDAEAQQNLLNHINKMKGVAKSYHEVKAAADVDSEKSTFVRPILFELNNLNELQRE
                     VFGPVLHVVRYRADELDSVIDQINSKGYALTHGVHSRIEGTVRHIRSRIEAGNVYVNR
                     NIVGAVVGVQPFGGHGLSGTGPKAGGSFYLQKLTRIPEWVAPTLSQIGQADEAALKRL
                     EALIHKLPFNAEEKKAAAAALGHARIRTLRRAESVLTGPTGERNSISWHAPKRVWIHG
                     GSTVQAFAALTGLAASGVQAVVEPDSPLASYTADLDGLLQISGKPENTGVNHVAALSP
                     LDSSRKQELANRDGALIRILPSGQGLDILQVFEEISCSVNTTAAGGNAGLMAVAD"
     gene            12133..>12226
                     /locus_tag="ACFJAG_001638"
     CDS             12133..>12226
                     /locus_tag="ACFJAG_001638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglucosamine transferase"
                     /protein_id="HFC3980884.1"
                     /translation="MQPAKNLLFSSAAQAASEGNGRGPYVQADLA"
BASE COUNT         2860 a         3551 c         3009 g         2806 t
ORIGIN      
        1 gacagcaccc gtaccaacgt gtaatatgtc gggaaatcca ataaatttac acaagctaac
       61 atttatcatg ctcctcccct cccccgaagc acggcaatcc tcgctcaatc tgcaaaccct
      121 cattgccgaa gaaatcggca aacacggcaa ttggattcca ttttcacgtt ttatggaatt
      181 ggttttatac gctccgcaat acggctacta caccggcggc agccataaaa tcggcaatac
      241 cggggatttt attaccgcac cgaccctcac ccctctgttt gcacagacac tggcacgcca
      301 acttcaagaa ctcctgcccc aaacggcggg caatatctat gaattcggcg cgggaaccgg
      361 acagcttgcc gccgatttgt tgggcagcgt ttcagacagc atcaactgtt actatattat
      421 tgaaatatcg ccggagctgg cagcacgtca gaaaaacctg attcaagccc gtgcaccgga
      481 agcatctcaa aaagttgtcc acttgaccgc acttcccgaa gcgtttgacg gcatcatcat
      541 cggcaacgaa ttactcgatg ccatacctgt cgaaatcgtc cgtaaaaatg aaggaggatt
      601 actcgagcac atcggcgttt gcacggataa cggccgtttc gcctattctg caagaccctt
      661 gcacgacccg tcgctttcca cctcggcttc cctctatttt cctcaaacag attatcccta
      721 taccagcgaa ctgcacccgc aacaatatgc ctttatccgc acccttgcct caaggcttga
      781 acgcgggggt atgatattca tcgactacgg ttttgatgcg gcgcagtatt accacccgca
      841 acgcaatcaa ggcacattga tcggacacta ccgacaccac gttatccaca atcctttcga
      901 cttcatcggg ttggcagatc tgaccgccca cgtcaatttt accgacattg cccaagccgg
      961 tacggatgca ggactggatt tgacaggcta tctgccccag tcccattttc tgctgaatct
     1021 gggcataacc gaactgttgg cacagacggg taaaacagat tcggcagcct atatccgtga
     1081 agccgccgct gttcaaaaac tgattgacca gcatgaaatg ggcgaactgt ttaaagtcat
     1141 cgcattcgga aaaaatatcg gcatcgactg ggcaggattc cgcttcggcg acatctgcca
     1201 caaactccaa ccctcgtgcc gtctgaatcc gcttcagacg gcataaactt tttaacattt
     1261 aaaaacaaga aactaattca aaattaaaaa atacggcttg tcaaaaaaac aaaaaaacat
     1321 ataatagcta attcacgaaa cggcgaatta gctcagtcgg ttagagcaga ggaatcataa
     1381 tccttgtgtc cggggttcga gtccctgatt cgctaccaga ttttcggggg tatagctcag
     1441 ttggtagagc gcttgcatgg catgcaagag gtcagcggtt cgatcccgct tacctccacc
     1501 agataaaaaa gcacagaccg taaaaggtat gtgctttttt attgcctgat tgccggaaaa
     1561 taaagaataa accactgcct tcaaaacagg caatcgactt taaacctatt gccccgcctg
     1621 tcctgatttt atcagcccgc cagacaaacc cgacctgaat aatgtcttca ggtcgggttt
     1681 atggtttcat tcccaactta tccagcccga caaccacaat attatgatga caatgccgaa
     1741 aacaatgcgg taataggcaa acgggatata gtttttcttg gaaacaaact tcagcagtgc
     1801 tttaaccgct accaaaccgg aaacaaaagc ggcaataaag cctatcaaaa tcaaaccgac
     1861 atcatgcagg gtgaaaaatc ggtaatgttt caggacatca taagccgttg ctgcaaccat
     1921 catcggaacg gccaagaaaa atgaaaactc cgttgccgtt ttccgctcga ttccccaaag
     1981 catcccgccc ataaccgtac tgcccgaacg ggacgtaccc ggaaccagtg caaacacttg
     2041 ggcaacaccg atcatcaacg catcaatcgg acgcaatgca tcaacatcgg caattttagg
     2101 ctctgctcgg ctttggcgtt tctccaccca caaaataaaa aaaccgccca aaaccagcat
     2161 gactgcaaca ctcaaggggt taaacagata ctctttgatt tgtttgtcga acaacagccc
     2221 catcacggcg gcaggtataa aagcaatggc aagattgagg acgaaacggt tggctttccg
     2281 gtcttttccc acgccatgca acacattgct gaaacgctgc cggtattcaa acactaccgc
     2341 caaaaccgca ccgagctgga tggcaatttc aaaaaccttg tgattgctgt gaaaaccaat
     2401 cagattgccg aacacaatca aatgtccggt gctggaaatc ggtaaaaatt cggtaaaacc
     2461 ttctaccaag cccatcatca gggctttcag gacaatcaga aaatccattg cttgcgcttc
     2521 tttcggatac gggagttcgg ctatttctgt acagcagggg tctgacgctt gcgttcttcc
     2581 ctgactttgg caaccaattc tttaatcgta tgaacgccgc catcaaagcc attattgaag
     2641 ataacgcggt attttccgcc gacaataacg gtcggcgtgc tgtcaatacc gtattgttcc
     2701 gtcagtttct gcatttttaa tgcgacggcg gcagcttcgg gggaatcata ggcgcgcatc
     2761 agttttttgc cgtcaaaacc tttttgagat aaagcccatt ttccggcaac agccctgttt
     2821 tccaaacgga ttttttgttc gtaaactgct ttaaacacag cagagtttgc ctgatatttc
     2881 aaacccgaca gcttgaccgc agcagccatt cttgccagac cgagcatttc aggccgccag
     2941 accacgtgct ccgtccgcag ataagtatca gacggcaatg ccttgcccag tttcaataac
     3001 aaaggatcga aatgatggca atgtacgcaa aaatagccga aaaattccaa aacctcaatt
     3061 tttcccggct gttcttgagg aatgggttta tccaacacaa gatagtcttc cccttccgtc
     3121 agggcatatg cctgcgcgga caacactgcc gacagcagca gcggcaacag atgtttaaac
     3181 ttcataatta tttgccttca atcgcacgga tcaggctggc aaccccatgc tttttcaact
     3241 cgtcctgcat ttttttcacc gcatcggcag acatattgcc gctttgcacg cggtaaagcg
     3301 ttttatgtcc cgcctgatag ccgaccactt cggaagatat gcccaagatt gccagtttgg
     3361 cacgctgccc ttccgcgctc cggcggtcgg catacgcgcc catttgcaga taatgcgttg
     3421 cttccgcctt gccaaacgtt ttcattttct gcacttcttt ggcagcggca ctgcgcgctt
     3481 tttcgatgct gccgctgttg aggatttgtt ccggggtcgg tttgggtgca actttttcct
     3541 tcgccgcctt tttctcttct tttgaagctt ttttctctgt ttctttagac ggttttaccg
     3601 cttgtttttt aaccgtttcg gcatctttct tctgcgcttt ttccctgacg gtttgttcac
     3661 gctcttccgt cagtgctttc ttgcgcactg cctgtccgtc cggctcttcc cgttccggct
     3721 cgcccgcctt ttcttcaacc tcgtcggctt tgtcggcaac gggctgcttg tcggcagctt
     3781 tttccgcatc cgactgctct gcctctttcg caacatccgg ttcggacaag gcgttttgat
     3841 cggccggttc aggttggatg tcttccttag gctggttttt cagtttcagg atttccgttt
     3901 ctgcaggctg cttcgacgga gccgggattt tgaacgcatt ttgaccgccc tggttcagat
     3961 aaagcaaaat accggcaata atgaccgttg ccagtatcaa accgaagaag aaaccggaca
     4021 gaccttttcc ggattgggaa aatttgttca taaacatacc ttaatgtgtt tcagacggca
     4081 ttaacgccgt ttgcttacgg gcggatattc taacaatatc gccatatttg ggcaaaacct
     4141 gcttccattc ccgttcctat aaagcacgac ggaagcctat ggctttcatg acgtggcttc
     4201 tgccgacttc ttcatcgccc gccaaatccg ccaatgtacg cgccacgcgc ataatgcggt
     4261 ggaagctgcg ggcggaaaga gacaattttt ccagcaggct acccaaggct tcctgcgctt
     4321 ctttttggat gcaggcttgg gaatcgagtt cgctgacgct caaagcggcg ttgactttgc
     4381 cctgccgtgc gtattgtttg ccgcgggcgg cgatgacgcg ttccaaaacg gacgcactgc
     4441 tttcgcccgc ttcctgctgc atcagttcgg cggcggacag gctggggact tcgatggtca
     4501 aatcgatgcg gtcgagcagc ggaccggaaa ttttgcttcg gtaacgcgcg acactttcgg
     4561 gcgtgcagcg gcagggtttg acgggatgcc cgagataacc gcacggacac gggttcatgg
     4621 cagcgacaag ctggaatttg gcgggataga cggcttggcg cgccgcgcgg gaaatgtgga
     4681 tttcgccgtt ttccaacggt tcgcgcaaaa cctccaaaac tttgcggtcg aactcgggca
     4741 attcgtccaa aaataaaacg ccgtgatgcg ccaatgaaat ctcgcccgga cgcggatccg
     4801 agccgccgcc gaccatagcc gccgcgctgg cgctgtgatg cggactgcgg aaaggacggt
     4861 tgctgtcgag ttgttgttgg tggttgggca ggagcgaacg caatgcccaa acttctacca
     4921 attcgtcttc ggccagcggc ggcaggatgc cgggcagccg ttgggagagc atagacttgc
     4981 ctgttcccgg cgggcccatc atcaagaggc tgtgtccgcc tgcggcggcg atttccaaag
     5041 caaggcgggc agtgtgctga cctttcacat cacacaaatc aggttgtccg ccatgttcag
     5101 acggcatttg cggtacggaa cattcggttt gcgccaaagg ttcgataccg ttcaaatgag
     5161 cggcgacttc gcccaaagag cgcgcgccgt aaacggtaat gccgcgcatc acggcggctt
     5221 gtcctgcgtt ttcttcaggc aaaacaaatg cacgttttgc ctgcataccc tgccacgcca
     5281 tcgccaacgc gccgcgcacg gggcgcaaca accccgacag tgccaattcc cccgcaaact
     5341 cgtattccgc cagcttttcg ggtgcaacct gccccgatgc ggcaaggatg ccgattgcta
     5401 tcggcaaatc gaaacgcccc gactctttgg gcaggtcggc aggggcgagg ttgacggtga
     5461 tttttttggc ggggaattca aaaccgcttt gaataatggc ggcacggacg cggtcgcggc
     5521 tttcctttac ttccgtatcg ggcagtccga cgatgttgaa atgcggcagg ccgttggcaa
     5581 ggtgggcttc cacttcgacc aacggcgcat tcataccgct caaggcgcgg ctgtaaacca
     5641 aggcaagcga catatttcag acggccttat tcgccggctt cggtttgctg cctgatttcg
     5701 gcgacggctt cttcggcagc ggcttcagcc gcttccaatg ctgcccgttc gggattttgc
     5761 gcggcttcga gtttcgccag acgtgcttcc aaagccgcca gtttggtacg ggttttaatc
     5821 aaaacctgct gctggatgtc gaattcttcg cgcgtaacca aatccatacg gttgaacgcg
     5881 ccgcccagca tcgccttaat atttttttcc acatctttgg cagggctgtt ggcgatggtt
     5941 tcgctgattt tcgagccgac ttcttcaaaa agctgcttgc cgaacataat ctgcatcctt
     6001 cctgaacata tcaaattcaa gcggctattg tataaggaaa aatgccgtct gaaaacgggc
     6061 ggcggataat cgtcaaaaca taccgcgccc cctttgcggt tgctaaaatt acacttcgag
     6121 acacctgccg cctgaaaacg gatttcatat tccgcgcaac gcccgattac attacaagac
     6181 actacaaaac aatatgctgt tttaaatgat ttttccgatg cgcatcgttt caaactcggc
     6241 tttttaagcc attaagtgct ttgcaaacaa cagaaattgg gttatgctga aacggattat
     6301 ttacaatttc atatagtttc attacatatc ttattgtaat tgaagataat ttatccgaat
     6361 cccctttcgg gtatccggat tttccgttgt actttcatta gaaaaacatt tcaggcgcaa
     6421 gttgcttgca atttcaaagc ctgtaattct gaagttttag acgaggaata gcacatgaat
     6481 cccatgtaca tcacttttgc aatctatttg gttgcagtcc ttctcatcgg gcttgccgct
     6541 tatttttcca cgcgcaattt cgatgattat attttgggcg ggcgcagcct gggcccgttt
     6601 gttacggcga tgtcggcagg cgcgtccgat atgtccggct ggcttttgat gggtctgccg
     6661 ggcgcgattt atttgagcgg tttgaatgag gcttggattg ccatcggcct cttggtcggc
     6721 gcgtatttca actggctctt ggtggcgggc cgcctgcgcg tgcataccga atatgccaac
     6781 aatgcgctga cgctgccgga ttatttcttc caccgcttcg gcgcgggcgg acacttgatg
     6841 aaagtggttt ccgcactgat tatcctgttt ttcttcacga tttattgcgc ctcgggcatt
     6901 gtggcgggcg caaccctgtt ccaaagcctg tttgaaggta tgacttacaa tcaggcaatg
     6961 tggctgggcg cgggcgcgac catcgcctat accttcttgg gcggcttctt ggcggtcagc
     7021 tggacggata cgctgcaggc ttctttgatg attttcgccc tgattttaac gccggtgatg
     7081 gtctatctgg gcttgggcgg cgcggaacag atgtctgccg cgattcaaag cgtcgccgca
     7141 ggcacgggca aagaatacgg cagcctgttt gccggtacga ccgtcatcgg catcatttcc
     7201 accgccgcct ggggcttggg ctatttcgga cagccgcaca ttttggcgcg ctttatggcc
     7261 gccgaaagcg cgaaatcgct ggtatccgca cgccgcatcg gcatgacttg gatggcgttg
     7321 tgccttgcgg gcgcggtagc ggtcggttat ttcggcattg cgtatttcgg tgcaaacccc
     7381 gacaaagttt cttctatgag cggcaaccac gaacgcatct tcatcgcgct ttccaccctg
     7441 ctgttcaacc cttggatcgc cggcatcatt ttgagcgcga ttttggcggc ggtgatgtcc
     7501 accctgtcct gccagctttt ggtttgctcc agcgcgatta ccgaagactt ctacaaaggc
     7561 tttttgcgta aaaacgcgca acagtcggaa ttggtatggg tcggccgcct gatggtattg
     7621 gcgattgccg tgatttccat cctgattgct tccgatccga acagcaaagt attgggactg
     7681 gtgtcttacg cgtgggcagg tttcggtgcg gcattcggcc cgattgtgat tctgtccgta
     7741 ttgtggaaac gcatcactgc ctacggcgcg ttgtcaggca tggttgcagg tgcgtcaacc
     7801 gttgttgtgt gggcggaatg ggtaaaaaaa ccggctcgag cggcaggcga aagcggcttg
     7861 ttgacgatgt acgaaatcgt cccgggcttt attgtttgct tgatcgttgc cgtgttggtt
     7921 tccctgttca acaaagaacc ttcgcgcgaa atccaagaac gctttgaaaa agccgacgca
     7981 gattaccgcg ccgcccgata aacccctttc agacggcacg gcatcccggt tcgtgccgtc
     8041 tgaacccgct tccgggccaa acacaaataa accttgcctg catacaggcc ttatttgtgt
     8101 tttacccgtt tcattttcaa agaaacggaa gcaccgattc tgcccgcatt tgaagccttg
     8161 tatttcatct gcggatttat tacgatatta ccgtattcag gccgcaccga tgccgtctga
     8221 accccccgaa aaaactttgg aggatccaaa aaatgtttca ttttgcattt ccggcacaaa
     8281 ctgccctgcg ccaagcgata accgatgcct accgccgtaa tgaaatcgaa gccgtacagg
     8341 atatgttgca acgtgcacag atgagtgacg aagagcgcaa cgccgcctcc gagcttgccc
     8401 gccgtttggt tacccaagtc cgcgccggcc gcaccaaagc cggcggcgtg gatgcgctga
     8461 tgcacgagtt ttcactctcc agcgaagaag gcatcgcgct gatgtgtctg gcagaagccc
     8521 tgctgcgtat ccccgacaac gccacgcgcg accgcctgat tgccgacaag atttcagacg
     8581 gcaactggaa aagccatttg aacaacagcc cttccctctt cgtcaatgct gccgcctggg
     8641 gtctgctgat taccggcaag ctgaccgcca caaacgacaa acaaatgagt tccgcactcg
     8701 gccgcctgat cggcaaaggc ggcgcaccgc tcatccgcca aggcgtaaat tacgccatgc
     8761 ggcttctggg caaacagttc gtcaccggac agaccattga agaagccctg caaaacggca
     8821 aagaacgcga aaaaatgggc taccgcttct ccttcgatat gttgggcgaa gccgcctaca
     8881 cccaagccga tgccgaccgc tactaccgcg actatgtcga agccatccac gccatcggca
     8941 aagatgcggc aggacaaggc gtttacgaag gcaacggcat ttccgtcaaa ctctccgcca
     9001 tccatccgcg ctactcgcgc gcccaacacg gccgcgtgat gggcgaactg ttgcctcgcc
     9061 tgaaagaatt gttccttttg ggtaaaaaat acgatatcgg tatcaacatc gatgccgaag
     9121 aagccaaccg tctggagctg tctttggatt tgatggaggc actcgtttcc gaccccgatt
     9181 tggccggcta caaaggcatc ggtttcgttg ttcaagccta ccaaaaacgc tgcccgttcg
     9241 tcatcgacta tctgattgac ctggcccgcc gcaacaacca aaaactgatg atccgcctcg
     9301 tcaaaggcgc gtattgggac agcgaaatca aatgggcgca agtggacggc ttgaacggct
     9361 atccgaccta cacccgcaaa gtgcataccg acatctccta cctcgcctgc gcgcgcaaac
     9421 tgctttccgc gcaagacgcg gtattcccgc aattcgccac ccacaacgcc tacaccttgg
     9481 gcgcaatcta ccaaatgggc aaaggcaaag attttgaaca ccaatgcctg cacggtatgg
     9541 gcgaaacctt gtacgaccaa gtcgtcggtc cgcaaaactt aggccgccgc gtgcgcgtgt
     9601 acgccccggt cggcacacac gaaaccctgc tcgcctactt ggtgcgccgc ctgttggaaa
     9661 acggcgcgaa ctcgtctttc gtcaaccaaa tcgttgatga aaacatcagc atcgaccgcc
     9721 tgattaagag cccgttcgac accatcgccg aacaaggcat ccacctgcac aacgccctgc
     9781 cgctgccgcg cgatttgtac ggcaaatgcc gtctgaactc gcaaggcgtg gacttgagca
     9841 acgaaaacgt attgcagcag cttcaagaac agatgaacaa agccgccgca caagacttcc
     9901 acgccgcatc catcgtcaac ggcaaagccc gcgatgtcgg cgaagcgcaa ccgattaaaa
     9961 accctgccga ccacggcgat gttgtcggta cggtcagctt tgccgatgcc gcgcttgccc
    10021 aagaagcggt tggtgcagcc gttgccgcgt tccccgaatg gagtgcgaca cctgccgccg
    10081 aacgcgccgc ctgcctgcgc cgtttcgccg acctgctcga acagcacacc cccgcgctga
    10141 tgatgcttgc cgtgcgcgaa gcgggcaaaa cgctgaacaa cgccattgcc gaagtgcgcg
    10201 aagccgtcga tttctgccgc tactacgcaa acgaagccga acacaccctg cctcaagacg
    10261 caaaagccgt cggcgcgatt gtcgccatca gcccgtggaa cttcccgctc gccatcttta
    10321 ccggcgaagt cgtgtccgcc ctggcggcag gcaacaccgt catcgccaaa cctgccgaac
    10381 aaaccagcct gattgccggt tatgccgttt ccctcatgca cgaagccggc atcccgactt
    10441 ccgccctgca actcatcctc ggcgcaggcg acacgggtgc ggcattgacc aacgatgcca
    10501 gcatcggcgg cgtgattttc acaggctcga ccgaagtggc gcgcctgatc aacaaagccc
    10561 ttgccaaacg cggcgacaat cccgtcctga ttgccgaaac cggcggacaa aacgccatga
    10621 ttgtcgattc caccgcactt gccgaacaag tctgcgccga cgtattgaac tccgccttcg
    10681 acagcgcggg acaacgctgc tccgccctgc gtatcttatg cgtccaagaa gacgttgccg
    10741 accgtatgct cgacatgatc aaaggcgcga tggacgaact cgtcgtcggc aaaccgattc
    10801 agctcactac cgatgtcggc cccgtcatcg atgccgaagc gcagcaaaac ctgttgaacc
    10861 acatcaacaa aatgaaaggc gttgccaagt cttaccacga agtcaaagcc gccgccgatg
    10921 tcgattccga aaaatccacg ttcgttcgcc ccatcctgtt tgaattgaac aacctcaacg
    10981 aactgcaacg cgaagtcttc ggccccgtcc tgcacgtcgt ccgctaccgc gccgacgaac
    11041 tcgacagcgt catcgaccaa atcaacagca aaggctacgc cctgacccac ggcgtacaca
    11101 gccgcatcga aggcacggta cgccacatcc gcagccgcat cgaagccggc aacgtttacg
    11161 tcaaccgcaa catcgtcggt gcagtcgtcg gcgtacagcc cttcggcgga cacggtctgt
    11221 ccggcacagg ccccaaagca ggaggttcgt tctacctgca aaaactgacc cgcatccccg
    11281 aatgggttgc cccgaccctg agccaaatcg gacaggcaga cgaagccgcg ctcaaacgcc
    11341 tcgaagccct gattcacaaa ctgccgttca acgccgaaga gaaaaaagcc gcagcggccg
    11401 ctttgggaca cgcccgcatc cgcaccctgc gccgggcaga atccgtcctt accggcccga
    11461 ccggcgagcg caacagcatc tcatggcacg cgccaaaacg cgtttggata cacggcggca
    11521 gcacggttca agcctttgcc gcactgaccg gacttgccgc ctccggcgta caggcagtgg
    11581 tcgaacccga cagcccgctg gcttcctaca ccgccgactt ggacggtttg ctgcaaatca
    11641 gcggcaaacc cgaaaacacc ggtgtgaacc acgtcgccgc cctaagccca ctggacagca
    11701 gccgcaagca ggaactggca aaccgcgacg gcgcactcat ccgcatcctc ccgtccggac
    11761 aaggcttgga catcctgcaa gtgtttgaag aaatttcttg cagcgtcaac accacagccg
    11821 ccggcggcaa cgccggcctg atggcggttg ccgactgatt ttgccaaacc gcccgggcgc
    11881 ggcccgtgaa caaatgccgt ctgaaaacct ttcaggcggc attttatagt ggattaacaa
    11941 aaatcaggac aaggcggcga gccgcagaca gtacaaatag tacggcaagg cgggccaacg
    12001 ctgtactggt ttaaattcaa ttcactatat gtgttggcac atcgctccaa acctgatata
    12061 atccgccttt caacatcagt gaaaatcgtt ctttttagtc agttaacatt aaatttcgga
    12121 gtcgaaaaat gaatccagcc cgcaaaaaac cttctcttct cttccgcagc gcaggcggca
    12181 agtgaaggca atggccgcgg cccgtatgtg caggcggatt tagcct
//
LOCUS       DAXFZM010000071        11913 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.071, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000071 DAXFZM010000000
VERSION     DAXFZM010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11913)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11913)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11913
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.071"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(640..1719)
                     /gene="apbC"
                     /locus_tag="ACFJAG_001639"
     CDS             complement(640..1719)
                     /gene="apbC"
                     /locus_tag="ACFJAG_001639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster carrier protein ApbC"
                     /protein_id="HFC3980885.1"
                     /translation="MNIQNIRTLLDTVAVPNTARTLGGEKAVRSVGQRSDGIHIALHF
                     GFPVAHIAAALADAVQETLMPETGDTHIHLSIDTEIGTHKVRPGVTTIKGVKNIIAVA
                     SGKGGVGKSTATANLAAAMARMGARVGVLDADLYGPSQPTMLGVDDRKPDQKNQKLIP
                     VESSDGIQVMSIGFLVDTGQAVVWRGPMVSQALQQLMFQSEWDEVDYLFIDLPPGTGD
                     IQLTLSQRIPVTGSVIVTTPQDIALIDARKAVDMFRKVNIPILGVLENMSVHICSNCG
                     HSEALFGTDGGKDLAARLNVPLLGQLPLSLPVREAMDGGTPAQLFDEHPAIARIYTDA
                     AFQIALGIADKGKDFSSRFPKIVVE"
     gene            1938..2013
                     /locus_tag="ACFJAG_001640"
     tRNA            1938..2013
                     /locus_tag="ACFJAG_001640"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1971..1973,aa:Lys,seq:ttt)
     gene            2093..2602
                     /locus_tag="ACFJAG_001641"
     CDS             2093..2602
                     /locus_tag="ACFJAG_001641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein disulfide oxidoreductase"
                     /protein_id="HFC3980886.1"
                     /translation="MKKKLLSGIKFAVRTALVFLLVSLFLDWVRKPDEPAGAAGRPLT
                     LLSGQRLTLGQFSRDRTVLVYFWGSWCGVCRYQSPIIDDLAADGVPVVGVAVRSGSAS
                     EVAAYMAKRGLGFPTVSDEDGGLARSWRIAATPAVVLVKNGKMVRYTTGISSYWGLRA
                     RIFQADFFG"
     gene            2943..3383
                     /gene="nadR"
                     /locus_tag="ACFJAG_001642"
     CDS             2943..3383
                     /gene="nadR"
                     /locus_tag="ACFJAG_001642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family adhesin repressor NadR"
                     /protein_id="HFC3980887.1"
                     /translation="MPTQSKHASINIGLIQAREALMTQFRPILNQANITDQQWRIIRL
                     LAENGTLDFQDLANQACILRPSLTGILTRLEKAGLVVRLKPSNDQRRVYLKLTSEGEK
                     LYEEIGEEVDERYDAIEEVLGREKMLLLKDLLAELAKIEDALNS"
     gene            3498..3998
                     /gene="hpaC"
                     /locus_tag="ACFJAG_001643"
     CDS             3498..3998
                     /gene="hpaC"
                     /locus_tag="ACFJAG_001643"
                     /EC_number="1.14.14.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0042537 - benzene-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-monooxygenase,
                     reductase component"
                     /protein_id="HFC3980888.1"
                     /translation="MADLQKTFQTSFRDAMASCAAGVHVITTDGAAGRYGITMTAVAP
                     VTDEPPTVMLCINRSARIIPILSENGSLCINMLADEHQDVAEHFAGLTGLSPEERFAY
                     HIWHRGKTGQLEIEGALAHLHGHIVGKHEIGTHFVFYVRLDEIKNCGCKRPALLYFRR
                     QFRPLD"
     gene            4014..4709
                     /gene="murU"
                     /locus_tag="ACFJAG_001644"
     CDS             4014..4709
                     /gene="murU"
                     /locus_tag="ACFJAG_001644"
                     /EC_number="2.7.7.99"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramate alpha-1-phosphate
                     uridylyltransferase MurU"
                     /protein_id="HFC3980889.1"
                     /translation="MKAMILAAGRGERMRPLTDTTPKPLLDVAGKPLIGWHLCRLKQA
                     GFTEIVINHAWLGRQIENALGDGSAYGVNIAYSPEPAGGLETAGGIAQALPLLGGQPF
                     LVANGDVLTDIDFTAAFQTASSLPGHISAHLWLVGNPPHNPDGDFSLLPDGSVRPEVS
                     GGNGLTFSGVGIYRPEMFDGIEAGSVAKLAPVLLNEMRQNRVSGQKHTGLWLDVGTVC
                     RLKEAQALAAAWK"
     gene            complement(4743..5155)
                     /locus_tag="ACFJAG_001645"
                     /pseudo
     CDS             complement(4743..5155)
                     /locus_tag="ACFJAG_001645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258698.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
     gene            5348..7024
                     /locus_tag="ACFJAG_001646"
     CDS             5348..7024
                     /locus_tag="ACFJAG_001646"
                     /EC_number="6.3.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004329 - formate-tetrahydrofolate ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate--tetrahydrofolate ligase"
                     /protein_id="HFC3980890.1"
                     /translation="MSFKTDAETAQSSTMRPIGEIAAKLGLNVDNIEPYGHYKAKINP
                     AEAFKLPQKQGRLILVTAINPTPAGEGKTTVTIGLADALRHIGKDSVIALREPSLGPV
                     FGVKGGAAGGGYAQVLPMEDINLHFTGDFHAIGAANNLLAAMLDNHIYQGNELNIDPK
                     RVLWRRVVDMNDRQLRNIIDGMGKPVDGVMRPDGFDITVASEVMAVFCLAKDISDLKE
                     RFGNILVAYAKDGSPVYAKDLKAHGAMAALLKDAIKPNLVQTIEGTPAFVHGGPFANI
                     AHGCNSVTATRLAKHLADYAVTEAGFGADLGAEKFCDIKCRLAGLKPDAAVVVATVRA
                     LKYNGGVERANLGEENLEALAKGLPNLLKHISNLKNVFGLPVVVALNRFVSDSDAELA
                     MIEKACAEHGVEVSLTEVWGKGGAGGADLARKVVNAIDNQPNNFGFAYDVELGIKDKI
                     RAIAQKVYGAEDVDFSAEASAEIASLEKLGLDKMPICMAKTQYSLSDNAKLLGCPEGF
                     RIAVRGITVSAGAGFIVALCGNMMKMPGLPKVPAAEKIDVDEHGVIHGLF"
     gene            7138..8229
                     /gene="ychF"
                     /locus_tag="ACFJAG_001647"
     CDS             7138..8229
                     /gene="ychF"
                     /locus_tag="ACFJAG_001647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002642527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HFC3980891.1"
                     /translation="MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIV
                     EVPDPRMAELAKIVNPQKMQPAIVEFVDIAGLVAGASKGEGLGNRFLANIRETDAIVN
                     VVRCFDDDNIVHVSGKVDPIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQK
                     LVDLCKKLLPHLDEGKPVRSFGLDAEERALLKPLFLLTAKPAMYVGNVAEDGFENNPH
                     LDRLKELAAKENAPVVAVCAAMESEIAELEDGEKAEFLAEMGLEEPGLNRLIRAGYDL
                     LGLQTYFTAGVKEVRAWTIHKGDTAPQAAGVIHTDFERGFIRAQVIAYDDFVSLGGEA
                     KAKEAGKMRVEGKEYVVQDGDVMHFLFNV"
     gene            8503..10377
                     /locus_tag="ACFJAG_001648"
     CDS             8503..10377
                     /locus_tag="ACFJAG_001648"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HFC3980892.1"
                     /translation="MSQALPYRPDIDTLRAAAVLSVIVFHIEKDWLPGGFLGVDIFFV
                     ISGFLMTAILLREMSGGRFFLKTFYIRRIKRILPAFFAVLAATLAGGFFLFTKDDFFL
                     LWKSALTALGFASNLYFARGKDYFDPAQEEKPLLHIWSLSVEEQFYFVFPILLLLVAR
                     KSLRVQFGFLAALCALSLAASFMPSALDKYYLPHLRACEMLVGSLTAVRMRYRQQRNP
                     AVGKRYAAVGALFSACILSACLFAYSEQTAYFPGPAALIPCLAVAALIYFNHYEHPLK
                     KFFQWKITVAAGLISYSLYLWHWPILAFMRYIGPDNLPPYSPAAAIVLTLAFSLISYH
                     CIEKPFKKWKGSFAQSVLWIYALPMLVLGAGSFFAMRLPFMAQYDRLGLTRSNTSCHN
                     NTGKQCLWGDTEKQPELLVLGDSHADHYKTFFDAVGKKEKWSATMVSADACAYVEGYA
                     SRVFQNWAACRAVYRYAEEHLPRYPKVVLAMRWGSQMPENSRSLAYDAGFFQKFDRML
                     HKLSSEKQAVYLMADNLASSYNVQRAYILSSRIPGCRQTLRPDDESTLKANARIRELA
                     AKYPNVYIIDAAAYIPADFQIGGLPVYSDKDHINPYGGTELAKRFSEKQRFLDTRHNH
                     "
     gene            10439..11734
                     /gene="tyrS"
                     /locus_tag="ACFJAG_001649"
     CDS             10439..11734
                     /gene="tyrS"
                     /locus_tag="ACFJAG_001649"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004831 - tyrosine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006437 - tyrosyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HFC3980893.1"
                     /translation="MSVIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSL
                     HIGHLLPVLALRRFQQAGHTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVGSIR
                     SQLTPFLSFEGGNAAIMANNADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRD
                     GAGISFTEFAYSLLQGYDFAELNKRHGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFG
                     LTLPLVTKSDGTKFGKTEGGAVWLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSI
                     EEIGVVEAKDKASGSKPEAQRILAEEMTRLIHGEEALAAAQRISESLFAEDQSRLTES
                     DFEQLALDGLPAFEVSDGINAVEALVKTGLAASNKEARGFVNAKAVLLNGKPAEANNP
                     NHAAERPDDAYLLIGEYKRFGKYTILRRGKRNHALLVWK"
BASE COUNT         2631 a         3259 c         3315 g         2708 t
ORIGIN      
        1 ctagctctct cccacaggga gagaggacgg gtcggctgtt ggggttaagg gttttgtaaa
       61 ctaatcaggt tgtgcaggct gctttttgct tttcagacga cctgcatcaa cggttgtaaa
      121 tccaatctgt ttttcaaacc gcctgcaacc gcaaaacctg ccgcaatccg ctccctcccc
      181 tgtgggggag ggccggggag agggcattct ccgaatggtg gcaatctttc ctaatacctt
      241 cgccgcccaa atacaagcct tgcggcttgt tgccctctcc cacgggagag aggacgggga
      301 ggctgttggg gttaagggtt ttgtaaacta atcaggttgt gcaggctgct ttttattttt
      361 cagacgacct gcatcaacgg ttgtaaatcc aatctgtttt tcaaaccgcc tgcaaccgaa
      421 aaatctgccg aaacccactc cctcccccgt gggggagggc cggggagagg gcattctccg
      481 aatggtggca atctttccta ataccttcgc cgcccaaata caagccttgc ggcttgttgc
      541 cctctctcca gctctctccc acagggagag aggactatga agcccgccgg caggcgcggg
      601 gcttgggacg gcattgctgc tgcggtttcg gacgcggctt tattcgacga cgattttagg
      661 gaaccggctg ctgaagtctt tgcctttgtc ggcaatgccc agggcgattt ggaatgcggc
      721 atcggtgtag attcgggcga tggcggggtg ttcgtcgaac agttgcgccg gtgtgccgcc
      781 gtccatggct tcgcgcacgg gcaggcttag gggaagctgt ccgagcaggg ggacgttgag
      841 gcgggccgcc aaatctttgc cgccgtccgt gccgaacagt gcttcgctat gcccgcagtt
      901 ggagcagata tggacggaca tgttttccaa tacgcccaaa atgggaatgt tgaccttgcg
      961 gaacatatcc acggctttgc gcgcgtctat cagcgcgatg tcctgcggcg tggttacgat
     1021 gacggacccg gttacgggga tgcgttggga cagcgtgagt tggatgtcgc ccgtgccggg
     1081 gggcaggtcg atgaaaagat agtccacttc gtcccactcg ctttggaaca tcagctgctg
     1141 caaggcttgg ctgaccatcg gcccgcgcca gacgacggct tggccggtat cgacgagaaa
     1201 gccgatggac atgacctgta tgccgtctga agattcgacg ggaatgagtt tttggttttt
     1261 ctgatcgggt ttgcggtcgt ccacgcccag catcgtgggc tggctcgggc cgtaaaggtc
     1321 ggcatcgagc acgccgacgc gtgcgcccat gcgcgccatt gcggcggcaa ggttggcagt
     1381 ggcggttgat ttgcccacgc cgccttttcc cgatgcgacg gcaatgatgt ttttcacgcc
     1441 tttgatagta gtaacgccgg gccggacttt gtgtgtgccg atttcggtgt ctatggacag
     1501 atggatgtgt gtgtcgcctg tttcgggcat cagggtttct tgtacggcat cggcgagggc
     1561 ggcggcgatg tgcgcgacag ggaaaccgaa atgcagggcg atatggatgc cgtctgaacg
     1621 ctgtccgacc gagcggacgg ccttttcgcc gccgagcgtg cgtgccgtat tcggaacggc
     1681 gacggtgtcg aggagggtgc ggatgttttg tatgttcatg atgtgtgcct ctgttcgcaa
     1741 gtcgtgtgag gggaagatag acggaaagtg tacatgattt tgggcagttt gcttttttct
     1801 tgtgcgaact tttacacggt atgcggcgga ttgtgaaaat ccgttgccaa aatatcccgt
     1861 gcaaacagca gtctgcaatt aagcctgtaa aaattgcttg acggcgggga acggggctgt
     1921 ataatgcacg gcttatcggg tcgttagctc agccggtaga gcagcggact tttaatccgt
     1981 tggtcgagcg ttcgaatcgc tcacgaccca ccagataacc ggaagccaag tttcgagact
     2041 tggctttttt gtttgcctgc cggttgcgcg ggcgtaccgt ttgcgggggt gtatgaaaaa
     2101 gaaactgctt tcgggcatca aatttgccgt tcggacggca ttggtgtttt tgctggtgtc
     2161 gctgtttttg gattgggtac gcaagcccga cgaacctgcc ggggcggcag ggcggccttt
     2221 gaccctgctg tcggggcagc ggctgacttt gggacagttt agccgggata ggacggtgct
     2281 ggtgtatttt tggggaagct ggtgcggcgt gtgccgttat cagtcgccga taatcgatga
     2341 tttggcggcg gacggcgtgc cggtcgtcgg cgtggcggta cgttccggca gcgcgtccga
     2401 agtggcggca tatatggcaa aacggggctt gggctttccg actgtcagcg atgaggacgg
     2461 gggtttggca aggtcttggc ggattgccgc aacgcctgcc gtcgttttgg tcaaaaatgg
     2521 gaaaatggtc cgctatacga cgggaatcag cagttattgg ggcttgcgcg cacgaatttt
     2581 tcaggcggat tttttcggtt aacttttgtt tttgtcaaac tttccgctat gtagagaatc
     2641 aaacggcata tgccttgcgc ggcggatgcg gcggcttttg ttttttggga aagagccggc
     2701 gcgcctgccg atgtaatccc ttgttgtgat tgtgggaaaa atagattaaa atataactat
     2761 taaaatattt tcagatagga ttatcggaat taaagtcttt tatacccggt cgtccgatga
     2821 ggtttatagc gtattgttgc tatatgttcg ttttgttata taacggttgc atcaaaaatt
     2881 acgcccacag gctttcccga cggtttgaaa gtttgatttt cgataacttg gagacttaaa
     2941 caatgcctac ccaatcaaaa catgcgtcta tcaatatcgg tctgatacag gcaagggaag
     3001 ccctgatgac ccaattcagg cctattctga atcaggcgaa tattaccgat cagcaatggc
     3061 ggattatccg tcttttggcg gaaaacggca cattggattt tcaggatttg gcgaatcagg
     3121 cgtgcatttt gcgccccagc ctgaccggta tcctgacccg ccttgaaaaa gcggggttgg
     3181 tcgtccgcct gaaaccttcc aacgaccaac ggcgcgttta tctgaagctg acttccgagg
     3241 gcgagaagct gtatgaggaa atcggcgaag aagtggacga gcgttacgac gctatcgagg
     3301 aagtgctggg ccgcgagaaa atgctgctgc ttaaagacct gttggcagaa cttgccaaaa
     3361 tcgaggatgc gttgaactcg taatacgccg taatgcgcgg aaacgtccga ccgacggctt
     3421 tttgaatcag aactgctgca catgggggat gccttgtgtg cagcattctt atatagggga
     3481 cggtttaaag gggaaaaatg gcggatttgc agaaaacttt tcaaacttcg ttccgtgatg
     3541 cgatggcatc ctgtgcggca ggcgttcatg tcatcacgac agacggtgcg gcagggcgtt
     3601 acggcattac aatgacggcg gttgcgccgg ttaccgacga gccgccgacc gtgatgctgt
     3661 gcataaaccg gagtgcgcga atcattccga tcctgtcgga aaacggcagc ctctgcatca
     3721 atatgctggc ggacgaacat caggatgttg ccgaacattt tgccgggctg accggcctgt
     3781 cgcccgaaga gcggtttgcc taccatattt ggcatcgcgg caaaacggga caacttgaaa
     3841 tagaaggcgc gttggcgcac ctgcacgggc atattgtcgg caaacatgaa atcggcacgc
     3901 attttgtgtt ttacgtcagg ctcgacgaaa tcaaaaactg cgggtgcaaa cgccccgcgc
     3961 tgctgtattt cagacggcag tttaggcctt tagactgata ttcggacaga tatatgaaag
     4021 cgatgatact ggcggcagga cgcggcgagc gtatgcgccc tttgaccgac accactccga
     4081 agccgctgct cgatgtggcg ggtaagcctc taatcggttg gcacttgtgc cgtctgaagc
     4141 aggcggggtt taccgaaatc gtcatcaacc acgcttggct gggtcggcag atagaaaatg
     4201 ctttgggcga cggctcggct tatggcgtga acatcgccta ttcgcccgaa cccgcaggcg
     4261 gtttggaaac ggcaggcggc atcgcgcagg cattgccgct gttgggtggg cagccgtttt
     4321 tggtggccaa cggcgacgtg ctgaccgaca tcgattttac cgccgcgttt cagacggcat
     4381 cgtccctgcc cgggcacatt tccgcacatt tgtggctggt gggaaatccc ccgcacaacc
     4441 ccgacggcga tttttccctg ctgcccgacg gcagcgtgcg gccggaagta tccggcggca
     4501 acggactgac attcagcggc gtgggtattt accgtcctga aatgtttgac ggaatcgaag
     4561 cgggcagtgt ggcaaaactc gcgcccgtat tgctgaacga aatgcggcaa aaccgcgtga
     4621 gcggtcagaa gcatacgggc ctgtggctgg atgtcggcac ggtatgccgt ctgaaggaag
     4681 cgcaagccct tgcagcggct tggaagtgaa aactcggttt caggcggtat ggcggattcg
     4741 gtttaacgtt tcagtgccaa cgtcaacacg ccgccgtaac cagccccaag tctatccatt
     4801 cctgcgtgtt cgggcgttcg tctaagaaaa tcaccgccat cagcgcgacc aagaccaggc
     4861 tgaatttgtc gacgggcgcg acttgcgggg cgttgcccag ttgcagggct ttgaagtagg
     4921 cgagccaaga tgcgccggtg gcgagtccgg acaaaaccgg aaacgtccgg ttgcgccccg
     4981 tgaagccgtt tacgccctgc catttgccgg tgtaggtcaa aaacaatacc aaggcggcga
     5041 ggatgaccaa ggtgcggata aaggcggcga aatccgaatc tatgccctgc aagcccattt
     5101 tggcgaaaac ggcggtcaat gaggcgaagc ctgccgatgc caatgcccaa aacagctatg
     5161 cgttgctgcc catgttttct cctttgattg tgaacaatat gaacggtatt tttgttgctg
     5221 cgtcaaaaat ttcactgcgg gtttggtgcg gataacgtta taatatgcct gatattattt
     5281 tcaatccacc tgtttgtcgc ctgatgcttt cagacggcat gtccctcctc atttctaaag
     5341 gaaaatcatg agcttcaaaa ccgatgccga aaccgcccaa tcctccacca tgcgcccgat
     5401 tggcgaaatt gccgccaagc tgggtttgaa cgttgacaac attgagcctt acggtcatta
     5461 caaagccaaa atcaatcctg ccgaagcgtt caagctgccg caaaaacaag gcaggctgat
     5521 tttggttacc gccatcaacc cgactccggc gggcgaaggc aaaaccaccg taaccatcgg
     5581 tttggcggac gcattgcgcc atatcggcaa agactctgtg attgctttgc gcgagccttc
     5641 tttgggtccg gtgttcggcg tgaaaggcgg cgcggcaggc ggcggctacg cgcaagtttt
     5701 gccgatggaa gacatcaacc tgcacttcac cggcgacttc cacgccatcg gtgcggcgaa
     5761 taacctcctc gccgccatgc tcgacaacca tatctaccaa ggtaacgagt tgaacatcga
     5821 ccccaaacgc gtgctgtggc ggcgcgtggt cgatatgaac gaccgccagt tgcgcaacat
     5881 catcgacggt atgggcaagc ctgttgacgg cgtgatgcgt cccgacggct tcgacatcac
     5941 cgtcgcctcc gaagtgatgg cggtattctg ccttgccaaa gacatcagcg atttgaaaga
     6001 gcgttttggc aatattctcg tcgcctacgc caaagacggc agccccgttt acgccaaaga
     6061 tttgaaggca cacggcgcga tggcggcatt gctaaaagat gcgattaagc ccaatttggt
     6121 gcaaaccatc gaaggcactc cggcctttgt acacggcggc ccgttcgcca acatcgccca
     6181 cggctgcaac tccgttaccg caacccgtct ggcgaaacac cttgccgatt acgccgtaac
     6241 cgaagcaggc ttcggcgcgg acttgggtgc ggaaaaattc tgcgacatca aatgccgcct
     6301 tgccggtttg aaacctgatg cggcagtcgt cgtggcgact gtccgcgccc tgaaatacaa
     6361 cggcggcgtg gaacgcgcca accttggtga agaaaacctc gaagccttgg caaaaggttt
     6421 gcccaacctg ttgaaacaca tttccaacct gaaaaacgta ttcggactgc ccgtcgtcgt
     6481 tgcgctcaac cgcttcgtgt ccgactccga tgccgagttg gcgatgattg aaaaagcctg
     6541 tgccgaacac ggcgttgaag tttccctgac cgaagtgtgg ggcaaaggcg gcgcgggcgg
     6601 cgcggatttg gcgcgcaaag tcgtcaatgc catcgacaac caacctaata acttcggttt
     6661 cgcctacgat gtcgagttgg gcatcaaaga caaaatccgt gcgattgccc aaaaagtgta
     6721 cggcgcggaa gatgtcgatt tcagcgcgga agcgtctgcc gaaatcgcct cgctggaaaa
     6781 actgggcttg gacaaaatgc cgatctgcat ggcgaaaacc caatattcat tgagcgacaa
     6841 cgccaaactc ttgggctgcc ccgaaggctt ccgcatcgcc gtacgcggta tcactgtttc
     6901 cgccggcgcg ggcttcatcg ttgcgttgtg cggcaatatg atgaaaatgc cgggcctgcc
     6961 gaaagttccg gctgccgaga aaatcgatgt ggacgaacac ggcgtgattc acggcttgtt
     7021 ctgaacggtt tttgaaaccg gatgccgtct gaagccgttt cagacggcat ttttgcagga
     7081 tgctggaggc ggtatgctat aattctccgt taaatttctc tattttcagg aaaaaccatg
     7141 agtttgaaat gcggcatcgt cggtttgccc aacgtcggca aatccaccct ttttaacgcg
     7201 ctgacccaat cgggcatcga agcggcaaac tatcccttct gcaccatcga acccaacgtc
     7261 ggcatcgtcg aagtgcccga cccgcgtatg gcggagctgg cgaaaatcgt caatccgcaa
     7321 aaaatgcagc ccgccatcgt cgagtttgtc gatattgccg gcttggttgc gggcgcgagc
     7381 aaaggcgaag gcttgggcaa ccggttcctt gccaacatcc gtgaaaccga tgccatcgtc
     7441 aacgtcgtgc gctgctttga cgacgacaac atcgtccacg tttccggcaa agtcgatccg
     7501 attgccgaca tcgaaaccat cggcaccgaa ttggcgcttg ccgacttggc aagtgtggaa
     7561 aaagccatcg tccgcgaaga aaaacgcgcc cgatcaggcg acaaagacgc gcaaaaacta
     7621 gtcgatttgt gcaaaaaact gctgccgcat ctggacgaag gcaaacccgt gcgttccttc
     7681 ggtttggacg cggaagaacg cgcgctgctg aagccgctgt tcctgctgac cgccaaacct
     7741 gcgatgtatg tgggaaacgt tgccgaagac ggttttgaaa acaacccgca cctcgaccgc
     7801 ctgaaagaat tggcggcaaa agaaaacgcc cccgtcgttg ccgtctgcgc cgcgatggag
     7861 agcgaaatcg ccgaattgga agacggtgaa aaagccgaat ttcttgccga aatgggcttg
     7921 gaagaaccgg gcttgaaccg cctcatccgc gcgggttacg accttttggg actgcaaacc
     7981 tacttcaccg ccggcgtgaa agaagtccgc gcgtggacga tacacaaagg cgacaccgcg
     8041 ccgcaagccg ccggcgtgat ccatacggat tttgaacgcg gcttcatccg cgcccaagtg
     8101 attgcctacg atgattttgt ctcgctcggc ggcgaagcca aagccaaaga agccggcaaa
     8161 atgcgcgtgg aaggcaagga atacgtcgtg caggacggcg acgtgatgca ctttttgttt
     8221 aacgtgtaac ccaaatgcgg caggttttca gacggctttg ccggaaatgc cgtctgaagc
     8281 cggttttggt ggttttcgac gttcccatac cgccggaatg cagccgcatc aaaataaaat
     8341 ccctcccgca tttccgattt gccctccccg attcctgcaa aacaaaccgc ctgccctgcc
     8401 gttacgggaa gccgtccggt attccgaata tcccgaaccc cgatacaaaa tgacctttca
     8461 gacggcattt gcacagcccg ccgcgtttca agtaaaaaca ttatgagcca agccttaccc
     8521 taccgcccgg acatcgacac attgcgcgcc gccgccgtct tgtccgtcat cgtgttccat
     8581 atcgaaaagg attggctgcc gggcgggttt ctcggtgtcg atatattctt tgtgatttca
     8641 ggctttttga tgacggcgat cctccttcgc gaaatgtccg gggggcgttt cttcctcaag
     8701 acattttata tccgccgcat caaacggatt ttgcccgcat ttttcgccgt attggcggca
     8761 acgctggcag gcggcttctt tttattcacc aaagatgatt tctttctttt gtggaaatcc
     8821 gcgctgaccg ccttgggttt cgcctccaac ctgtattttg caagggggaa ggattatttc
     8881 gatcccgcgc aggaagaaaa gcccctgctg cacatctggt ctttgtcggt cgaagaacaa
     8941 ttttactttg tctttccgat attgctgttg cttgtcgccc gcaaaagcct gcgcgtacag
     9001 ttcggcttcc tcgccgcatt gtgcgcctta agccttgccg cttcctttat gccttccgcg
     9061 ctcgataaat attacctgcc ccacctgcgc gcctgcgaaa tgctggtcgg atcgctgacc
     9121 gccgtgcgga tgcggtaccg gcaacagcgg aatcccgccg tcgggaaacg gtatgccgcc
     9181 gtcggcgcat tgttttccgc gtgcatactg tccgcctgcc tgtttgccta ttcggaacaa
     9241 accgcctatt tcccgggccc cgccgctttg attccctgtc tggctgttgc cgcgctgatt
     9301 tatttcaacc attacgaaca cccgcttaaa aaatttttcc aatggaaaat caccgttgcc
     9361 gccggtttga tttcctattc gctttatctg tggcattggc cgatattggc ctttatgcgc
     9421 tatatcggcc cggacaacct gccgccttat tcgccggcgg cagcgatcgt cctgaccctg
     9481 gcgttttccc tgatttctta tcactgcatc gaaaagccgt ttaaaaaatg gaaaggctcg
     9541 ttcgcacaat ccgttttatg gatttatgcc ttgcctatgc tcgttttggg cgcgggctcg
     9601 tttttcgcga tgaggctgcc gtttatggcg caatacgacc gcttggggct gacgcgttcc
     9661 aacacctcct gccacaacaa taccggcaaa caatgcctgt ggggggatac ggaaaaacag
     9721 ccggaactgc tggttttggg cgactcccac gccgaccatt acaaaacatt cttcgatgcc
     9781 gtgggcaaaa aagaaaaatg gtccgccact atggtttccg ccgacgcctg cgcctatgtg
     9841 gaaggctacg cgtcccgtgt gttccaaaac tgggccgcct gccgcgccgt ttaccgctat
     9901 gccgaagaac acctgccccg gtatccgaaa gtggttttgg cgatgcgctg gggcagccag
     9961 atgcccgaaa acagccgctc ccttgcctac gatgccggtt ttttccaaaa attcgaccgt
    10021 atgctgcaca aactctcatc cgaaaaacaa gccgtttacc tgatggcgga caacttggct
    10081 tcgtcttaca acgtccagcg cgcctatatc ttgtcttcac gcataccggg ttgccgccaa
    10141 acactgcgcc cggacgacga aagcaccctg aaagccaatg cccgcatcag ggaattggca
    10201 gccaaatacc ccaacgtcta tattattgat gccgccgcct atatccccgc agatttccaa
    10261 atcggcggat tgccggttta ctcggacaaa gaccacatca acccttacgg cggcacagaa
    10321 ttggcgaagc gtttttccga aaaacaaagg tttctcgata cgcgccataa ccattgattc
    10381 gcttaaattt gttacaatcg gcggtttgca aaaccgctaa tttttttgaa agagaccgat
    10441 gagcgtcatc caagacctgc aatcgcgcgg ccttatcgcg caaaccaccg acatcgaagc
    10501 cttagacgct ttgctgaacg aacaaaaaat cgccctttac tgcggtttcg acccgacagc
    10561 cgacagcctg cacatcggac acctgctgcc cgtattggca ttgcgccgct tccaacaggc
    10621 ggggcatacg ccgattgcac tggtgggcgg cgcgaccggt atgatcggcg accccagctt
    10681 caaagccgcc gaacgcagct tgaattccgc cgaaaccgtt gccggctggg taggaagcat
    10741 acgcagccaa ttaacccctt tcttgagctt tgaaggcgga aacgccgcca ttatggcgaa
    10801 caatgccgac tggttcggca gcatgaactg cctcgacttc ctgcgcgaca tcggcaagca
    10861 tttctccgtc aacgccatgc tgaacaaaga atccgtcaaa cagcgcatcg accgcgacgg
    10921 cgcaggcatt tcctttaccg agttcgccta ttccctgctg caaggctacg acttcgccga
    10981 gttgaacaaa cgccacggcg cggttttgga aatcggcggt tccgaccagt ggggcaacat
    11041 caccgccggt atcgacctga cccgccgcct gaaccaaaaa caagtgttcg gtctgaccct
    11101 gcctttggtt accaaatccg acggtaccaa attcggcaaa accgaaggcg gcgcggtgtg
    11161 gctgaacgcg aaaaaaacct cgccgtacca gttctaccag ttctggctga aagtcgccga
    11221 tgccgatgtg tataaattcc tgaaatactt taccttcctg tccatcgaag aaatcggtgt
    11281 cgtcgaagcc aaagacaagg caagcggcag caagcccgaa gcgcaacgca tcctcgccga
    11341 agaaatgacc cgcctgattc acggcgaaga agcccttgcc gccgcgcaac gcatttccga
    11401 aagcctgttt gccgaagacc aaagccggct taccgaaagc gacttcgagc agctcgccct
    11461 cgacggcctg cctgcatttg aagtttcaga cggcatcaac gccgtcgaag ccttggtcaa
    11521 aaccggcttg gcagcgtcca acaaagaagc gcgcggcttt gtcaatgcca aagcggttct
    11581 gctcaacggc aaaccggctg aagccaacaa ccccaaccac gccgccgaac gccccgacga
    11641 tgcctatctg ttgataggcg aatacaaacg tttcggcaaa tacaccatcc tccggcgcgg
    11701 caaacgcaac cacgcgcttt tggtttggaa ataatccgat tgccgcagaa atgccgtctg
    11761 aagctttcag acggcatttt tatcaaatgc aaaacaccct gcgcctgccg atatgtcgtc
    11821 atttccatgc aggcgggaat tcaaacttgt ccgcacggaa acttatcggg caaaacggtt
    11881 tcttcagttc tacgttctag atgcccgctt tcg
//
LOCUS       DAXFZM010000072        11734 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.072, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000072 DAXFZM010000000
VERSION     DAXFZM010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11734)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11734)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11734
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.072"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            293..1147
                     /locus_tag="ACFJAG_001650"
     CDS             293..1147
                     /locus_tag="ACFJAG_001650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pertactin-like passenger domain-containing
                     protein"
                     /protein_id="HFC3980894.1"
                     /translation="MSNGARWTVTNDSMLKELDLSEDAQVEFSDNNKFVKVSVSKLKG
                     DGGVFKMYGDIVKGESDKLITRKGSEGTHIIEYMDDAKAKTTGREYLKLVENKGNQED
                     NKASNKASYKLNVRCTEQGGWCFALGESGASKKVNISTDGKRDFYLYPDTLTPGASSS
                     VLFGEALYQLNAVSDETLVQRMGEIHADGTPQEDNNVWIKRVGGKFSGSRSDYRVGGY
                     GNRYWGFAGGFNRTGFGDKWIHYKGLMLRHLQSSYASEDYVGSGKILRQGGRCLFRLA
                     QPGKQGLL"
     gene            1237..1695
                     /locus_tag="ACFJAG_001651"
     CDS             1237..1695
                     /locus_tag="ACFJAG_001651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HFC3980895.1"
                     /translation="MPICFPPKPVGGWKNKTAAKTYRWQPEVQLSYWFTRGYGFPLSN
                     GLSAETDNFRSLMGRFGFRAGVDGLDGGRLNIYGKLMYKREFIGTIRHRFNGSAVEEF
                     KHRGGWLEYGLGVVRRNAGNGRQLYFEAQRSSMHTMRQNWQVNMGVRSMF"
     gene            complement(2178..3590)
                     /gene="trkA"
                     /locus_tag="ACFJAG_001652"
     CDS             complement(2178..3590)
                     /gene="trkA"
                     /locus_tag="ACFJAG_001652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015079 - potassium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Trk system potassium transporter TrkA"
                     /protein_id="HFC3980896.1"
                     /translation="MKILILGNGQVGSTVAQNLAAITNNDVTVIDIDEKALQETGSRL
                     DVQTVFGNGASPFTLERAGAEDADLLLALSRSDETNIVACKVAADLFNIPGRIARVRS
                     SEYLEYLSPKLENNENGSLSIFGITETISPEQLVTEQLAGLIDCPGALQVLRFADDRV
                     RMVIIQARRGGLLVGRSIADIAQDLPDGADCQICAVYRNNRLIVPAPQTVIIEGDEIL
                     FAAAAENIGAVIPELRPKETSTRRIMIAGGGNIGYRLAKQLEHAYNVKIIECRPRRAE
                     WIAENLDNTLVLQGSATDETLLDNEYIDEIDVFCALTNDDESNIMSALLAKNLGAKRV
                     IGIVNRSSYVDLLEGNKIDIVVSPHLITIGSILAHIRRGDIVAVHPIRRGTAEAIEVV
                     AHGDKKTSAIIGRRISGIKWPEGCHIAAVVRAGTGETIMGHHTETVIQDGDHIIFFVS
                     RRRILNELEKLIQVKMGFFG"
     gene            complement(3688..5211)
                     /locus_tag="ACFJAG_001653"
     CDS             complement(3688..5211)
                     /locus_tag="ACFJAG_001653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate hydratase"
                     /protein_id="HFC3980897.1"
                     /translation="MTVIKQEDFIQSICDAFQFISYYHPKDYIDALYKAWQKEENPAA
                     KDAMTQILVNSRMCAENNRPICQDTGIATVFLKVGMDVQWDADMSVEEMVNEGVRRAY
                     TWEGNTLRASVLADPAGKRQNTKDNTPAVIHMSIVPGGKVEVTCAAKGGGSENKSKLA
                     MLNPSDNIVDWVLKTIPTMGAGWCPPGILGIGIGGTPEKAVLMAKESLMSHIDIQELQ
                     EKAASGAELSTTEALRLELFEKVNALGIGAQGLGGLTTVLDVKILDYPTHAASKPIAM
                     IPNCAATRHVEFELDGSGPVELTPPRVEDWPDLTYSPDNGKRVDVDKLTKEEVASWKT
                     GDVLLLNGKILTGRDAAHKRLVNMLDKGEELPVDFTNRLIYYVGPVDPVGDEVVGPAG
                     PTTATRMDKFTRQMLKQTGLLGMIGKSERGAATCEAIADNKAVYLMAVGGAAYLVAKA
                     IKSSKVLAFPELGMEAVYEFEVKDMPVTVAVDSKGESIHATAPRKWQAKIGIIPVES"
     gene            complement(5518..6324)
                     /locus_tag="ACFJAG_001654"
     CDS             complement(5518..6324)
                     /locus_tag="ACFJAG_001654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="basic amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HFC3980898.1"
                     /translation="MNMKKWIAAALACSALALSACGGQGKDAAAPAANPGKVYRVASN
                     AEFAPFESLDSKGNVEGFDVDLMNAMAKAGNFKIEFKHQPWDSLFPALNNGDADVVMS
                     GVTITDDRKQSMDFSDPYFEITQVVLVPKGKKVSSSEDLKKMNKVGVVTGHTGDFSVS
                     KLLGNDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPAKGMDFVTLPDF
                     TTEHYGIAVRKGDEATVKMLNDALEKVRESGEYDKIYAKYFAKEGGQAAK"
     gene            complement(6376..6627)
                     /locus_tag="ACFJAG_001655"
     CDS             complement(6376..6627)
                     /locus_tag="ACFJAG_001655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980899.1"
                     /translation="MGSIEQRLEYLEEANDVLRMQNHVLSTAFKALIRALPADTAEIA
                     VESIQLAFEDALAELSYEDSPHTDLFHDVTYAFFREKER"
     gene            6729..7499
                     /locus_tag="ACFJAG_001656"
     CDS             6729..7499
                     /locus_tag="ACFJAG_001656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980900.1"
                     /translation="MDTNNQDKEPNWEKRLENLRQTRRMNTAPAYVPLTKPSEVGKEE
                     PIPKLDDANRDRVLKAYLKKWQEEHNSAVADCGEEVETDPMIVLQENWLNAQASLQMP
                     VSEKHIESRRRIRFDAKKDSAEFETAQIEGGENADAAESGTAADGVAENGEGGAEEAL
                     MPVQINILNPKAVNRREVFCLSEQELTERLIKRLRPHLTDTVNGMIRTAVQKQMALFT
                     YQLQQMLHEQAGAVVEDVLEHDVRKILNDIKYELKYKR"
     gene            7645..8814
                     /gene="metZ"
                     /locus_tag="ACFJAG_001657"
     CDS             7645..8814
                     /gene="metZ"
                     /locus_tag="ACFJAG_001657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="O-succinylhomoserine sulfhydrylase"
                     /protein_id="HFC3980901.1"
                     /translation="MSKKLHPQTLAIRGGKEQTGYREHNQALFLTSSFMWDNAQHAAD
                     LFSKKIKGFTYTRTANPTIAAFEKRIAALEGAERAVATSTGMSAIQAAFFTFLQAGGH
                     VVSSRSLFGTTVGFINNIVTKFGIGVSRVSPTDINEWKAAVKANTKLLFLETPSNPLG
                     EVADLEALAELAHGIGALLVVDNSLLSPVGSQPLKHGADISVSSATKAIDGHGRVMGG
                     VLAGSEELMAQVAVYCNSCGLAMSPFNAWQLLSGVETLSLRMEKQFDNALRIAQWLQE
                     QPQVQAVYYTGLPDHPQAELIRKQQNGGGIVIGFEVADQAAAWKVVDGVELFSRTANL
                     GDVRSTITNPWTTTHGRMQPEEKLAAGIRPGLVRLSVGLEYVGDLIDDLKQALAR"
     gene            8909..9115
                     /locus_tag="ACFJAG_001658"
     CDS             8909..9115
                     /locus_tag="ACFJAG_001658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2788 domain-containing protein"
                     /protein_id="HFC3980902.1"
                     /translation="MDEAVFADWALKICLTGLIIFLGFIVWNLGKESKAGKFGIAVLF
                     LVLGLGVFGFVFKELLIKFLVLPK"
     gene            9511..9735
                     /locus_tag="ACFJAG_001659"
     CDS             9511..9735
                     /locus_tag="ACFJAG_001659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980903.1"
                     /translation="MFIFYTVNPEHVYFPKAYIMKVFKDKGYESQCITTVSFYICNPT
                     LKQKTENEAYEYGRLFVKELMHKECNRESL"
     gene            9764..11050
                     /locus_tag="ACFJAG_001660"
     CDS             9764..11050
                     /locus_tag="ACFJAG_001660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor domain-containing
                     protein"
                     /protein_id="HFC3980904.1"
                     /translation="MADALADGGAAATAVGCPPRLIGGEQNKTPNPKGAEKTENQEFQ
                     FEYFSHFVSDGKGRFIEIPLRRGRDDGAFIDQITFTIHENSMTKVTGKGLVSDTEFVV
                     RYSELLEEILGFGITKKLPFKGKFFYQSCYQFGPDNVEYGKVHYGGQCETMLVELNGT
                     GCMAALPGWENRLYEFLSKCVRPKITRIDVAHDFFNGEYTPDQAMLDHDNGHYDVHNM
                     RPKSECRGTAWRNEDGSGKTFYIGKRGNSKFTRVYEKGRQLGDVDSPWVRFEGDIEIP
                     LDVLLYSGSYLGGAYPICKEIFKTEAKRMEVKVKNVNLIFDVKLFHARNQVGKMVNFL
                     RDIGWDDSRIVDELVKGVEGYPKGLQPEQYDCKNQTQKFQYIHEEQKAINALNIETLF
                     DDLIEEREYAFPQDREWQHIKDIEYEERQISDFLNN"
     gene            11064..11375
                     /locus_tag="ACFJAG_001661"
     CDS             11064..11375
                     /locus_tag="ACFJAG_001661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980905.1"
                     /translation="MFETSQVTTYTATLLGAKKFKGEIDGNKIDSCTVLVASPMPSNG
                     NAVGFTSESMKFGDSHNFEKLKNLKFPCAVDLTVAMESTGKGLVQKLLDFQVKGAAPK
                     A"
     gene            11389..11592
                     /locus_tag="ACFJAG_001662"
     CDS             11389..11592
                     /locus_tag="ACFJAG_001662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980906.1"
                     /translation="MSRYQQKFIVQELENHEFIYPDSFGDIGFTSNIKSAGKYDSYED
                     AFSSALEEIGGEFVIFGFYEKED"
BASE COUNT         2910 a         2768 c         3285 g         2771 t
ORIGIN      
        1 aatgttaagc agaaacgatt gtctcaaaaa aagcaacttt ggataaatac aatcaagaat
       61 tggctgaact aggtgaaaat gaaaagaaaa aagaagaact agaaaaaaag taaaacagca
      121 agaaaacaaa attcagatca gaaaaaggca catagaacgt ctaaaagaag acatagaaaa
      181 ggttgcggta ctcgaagaag aaatcaaaag atctgaaaag ttcttcgatg aaaacggttg
      241 gcttaaagac agcattatcg acgacaaaac aaaaaacgcc gtcaacctca aaatgagcaa
      301 cggcgcgcgt tggacggtta ccaatgattc aatgctgaaa gagttggatt tgtcggaaga
      361 cgcgcaggtc gaatttagcg acaacaataa attcgtcaaa gtgtccgtga gcaagctcaa
      421 gggcgatggc ggcgtgttca aaatgtatgg cgacatcgtc aaaggagaat cggacaagct
      481 gattacccga aaaggcagcg aagggacgca catcatcgaa tatatggacg atgccaaggc
      541 aaaaacgacg ggaagggaat atctgaaact ggtcgaaaac aagggcaatc aagaagacaa
      601 taaagcatca aataaagcat catacaaatt gaatgtccgc tgtacggaac agggagggtg
      661 gtgttttgcc ttgggtgagt cgggtgcttc caaaaaggtc aatatttcca cagacggtaa
      721 gcgggacttc tacctctacc cggataccct gacgccgggc gcatcgagca gcgtcctttt
      781 cggcgaggcg ttgtatcagt tgaacgcggt ttccgatgaa acgctggtgc agcgtatggg
      841 cgaaatccac gccgacggaa cgccgcagga agacaacaac gtttggatca aacgcgtcgg
      901 cggaaaattc tccggcagcc gcagcgatta ccgcgtgggc ggttacggca accgctattg
      961 gggctttgcc ggcggcttca acaggacggg gttcggcgat aaatggattc attacaaagg
     1021 gctgatgctc cgccacctcc aatcgtccta cgcttccgaa gactacgtcg gcagcggcaa
     1081 aatcttacgg cagggcggca ggtgtttatt ccgcctggct caaccgggaa agcagggctt
     1141 attatgattt ggtcgccaac atcgcccgat ataacggcag ctacgggctg accaattacg
     1201 ccggcaaacg ggtcgaatcg gacgaggcgc gcctgaatgc ctatatgctt tccgccgaag
     1261 ccggtaggcg gatggaaaaa caagacggcg gcaaaaacct atcggtggca gccggaagtg
     1321 cagttgtctt actggtttac gcgcggctac ggctttccgc tgtcaaacgg gctgtctgcc
     1381 gagacggaca acttccgcag cctgatgggg cggttcggct ttcgggcggg cgtggacggt
     1441 ttggacggcg gcaggctgaa catctacggc aagctgatgt acaaacgcga gtttatcggc
     1501 acgatccgcc acaggttcaa cggctctgcc gtggaggaat tcaaacaccg gggcggctgg
     1561 ttggaatacg gcttgggcgt ggtgcgccgc aatgccggaa acggacggca gctttatttt
     1621 gaggcgcaaa ggtcttcgat gcacacgatg cgccagaatt ggcaggtcaa tatgggcgtg
     1681 cgcagtatgt tctgatgcgc ggatacgcct gaaaacaatc cggaacggtc agacgcgttc
     1741 cggattgttt ttttgtcggg gcggtttgct gccatatcaa aacaggcggg cgatgccgtc
     1801 tgaaacttcg tcattcccgc gaaagcggga atctagaacc tcaaactttc agataatctt
     1861 tgaatattgc tgttgctcaa tggtttggat tcccgcaacc tttcgtcatt cccgtgaaaa
     1921 cgggaatcta gaatctctaa agcttcagct aacctttgaa tattgccgct ttccaatggt
     1981 ctagattccc gcctgcacgg gaatgacgat ttggaaatta cccgaaaccc aaaaacaact
     2041 gaaaccgaac aggccggatt cccgctacgc gggaatgacg gggggcggat gccgtctgaa
     2101 gcggtgggct gaagcccact ctactattat ttttgcttcc ataccgcttg gcggcaatgt
     2161 gtccggaatg gagcggttta tccgaaaaag cccattttga cttggatgag tttctccagt
     2221 tcgttcagga tgcgccggcg cgagacgaaa aagatgatgt ggtcaccgtc ttggatgacg
     2281 gtttcggtat ggtgtcccat aatggtttcg ccggttccgg cgcggacgac ggcggcaatg
     2341 tggcagcctt cgggccattt gatgccgctg atgcgcctgc cgatgatggc ggaagttttt
     2401 ttgtcgccgt gcgcgacgac ttcgatggct tccgccgtgc cgcgccggat ggggtggacg
     2461 gcaacgatgt cgccgcgccg gatgtgggcg agtatcgagc cgatggtgat gaggtggggg
     2521 gagacgacga tgtcgatttt gttgccttcg agcaaatcga cgtagcttga gcggttgacg
     2581 atgccgatga cgcgcttcgc gccgaggttt ttcgccaaaa gggcggacat aatgttgctt
     2641 tcgtcgtcgt tggtcagggc gcagaatacg tcgatttcgt cgatgtattc gttgtcgagc
     2701 agggtttcgt cggttgccga accttgcagg acgagggtgt tgtcgaggtt ttcggctatc
     2761 cattcggcac ggcgcggccg gcattcgatg attttgacgt tgtatgcgtg ttcgagctgc
     2821 ttggcgaggc ggtagccgat gttgccgccg ccggcaatca tgatgcggcg ggtgctggtt
     2881 tctttggggc gcaattcggg tatgaccgcc ccgatgtttt cggcggcggc ggcaaacagg
     2941 atttcgtcgc cttcgatgat gacggtttgc ggcgcgggga cgatgaggcg gttgttgcgg
     3001 taaacggcgc agatttggca gtcggccccg tcgggcaaat cttgggcgat gtcggcaatg
     3061 ctgcgtccga caagcagccc gccgcgccgc gcctgtatga tgaccatccg cacgcggtcg
     3121 tctgcaaaac gtaaaacctg caatgcgccc gggcagtcta tcaggccggc aagctgttcg
     3181 gtaacgagct gttcggggct gatggtttcg gttatgccga atatggaaag gctgccgttt
     3241 tcgttgtttt cgagcttggg gctgaggtat tcgaggtatt cgctggaacg gacgcgcgcg
     3301 atgcggccgg ggatgttgaa caggtcggcg gcaactttgc aggcgacgat gttggtttcg
     3361 tcgctgcggg agagcgcgag cagcaagtcg gcatcttccg cgccggcgcg ttctaatgtg
     3421 aagggggatg cgccgttgcc gaaaacggtt tggacatcga ggcggctgcc tgtttcctgc
     3481 aatgcttttt cgtcgatgtc gataacggtt acgtcgttgt tggtgatggc ggcaaggttt
     3541 tgcgcgacgg tagaacctac ctgcccgttg cctaaaatga ggattttcac ggtatgggtc
     3601 gccgggtgat gaaatggtgg attgtaccgc aaccggcggc ggaaatgccg tctgaaggca
     3661 gattttgcgt tcagacggca ttgcgcttca agattcgacg gggatgatgc cgattttcgc
     3721 ctgccatttg cgcggggcgg tggcgtggat ggattcgcct ttgctgtcca cggcgacggt
     3781 tacgggcata tctttgactt caaattcgta aacggcttcc atacccaatt cggggaacgc
     3841 caagactttg gaagatttga tggcttttgc cacgaggtat gccgcgccgc cgactgccat
     3901 gaggtacacg gctttgttgt cggcgatggc ttcgcaggtg gccgcgccgc gctcggattt
     3961 gccgatcatg cccaagaggc cggtttgttt gagcatttgg cgggtaaatt tgtccatgcg
     4021 ggtggctgtg gtcggacctg cgggaccgac gacttcatcg ccgaccggat cgacggggcc
     4081 gacgtagtaa atcaggcggt tggtgaaatc gacgggcaac tcctcgcctt tgtcgagcat
     4141 attgacgagg cgtttgtgcg cggcatcgcg gccggtgagg attttgccgt tcaacagcaa
     4201 tacgtcgccg gttttccagc ttgccacttc ttctttggtc agcttatcga catcgacgcg
     4261 tttgccgttg tcggggctgt aagtcagatc gggccagtct tcgacgcgcg gcggcgtgag
     4321 ttcgacagga cctgagccgt ccaattcaaa ttcgacgtgg cgggtggcgg cacagttggg
     4381 aatcatggca atcggtttgg aggcggcatg ggtcgggtaa tcgaggattt tcacgtccaa
     4441 cacggtggtc agaccgccca agccttgcgc gccgatgccc agcgcgttga ccttttcaaa
     4501 gagttcgagg cgcagggctt cggtggtgga caattccgcg ccggacgcgg ctttttcctg
     4561 caattcttgg atgtcgatgt ggctcatcag ggattctttc gccatcaaca cggctttttc
     4621 gggcgtgccg ccgatgccga tgcccaagat gccgggagga caccagcccg cgcccatcgt
     4681 cgggatggtt ttcaataccc aatcgacgat gttgtcggaa gggttgagca tagcgagttt
     4741 ggatttgttt tcagagccgc cgccttttgc cgcgcaggtt acttcgactt taccgcccgg
     4801 cacgatgctc atgtggatga cggcgggggt gttgtctttg gtgttttggc gtttgccggc
     4861 cggatcggcg aggacggaag cgcgcagggt gttgccttcc caagtgtagg cgcggcgtac
     4921 gccttcgtta accatctctt ccacgctcat gtccgcatcc cattgcacat ccataccgac
     4981 tttgaggaag acggttgcga tacctgtgtc ttggcagatg gggcggttgt tttcggcaca
     5041 catacggctg ttgaccaaaa tctgcgtcat cgcgtctttg gcggcgggat tttcttcctt
     5101 ctgccacgcc ttataaagcg cgtcgatgta gtcttttgga tggtagtagc tgatgaattg
     5161 gaaggcatcg cagatacttt gaataaagtc ttcttgcttg ataacggtca tgattgtgtt
     5221 ccttttcaag gttgtggcgg taagtgtctg ctgctgtttt aaacaacctt tttgaaggct
     5281 gttttttatc aggttgaaat agtgccagcg tttgtacggt gaagacaata cataattcta
     5341 atctcttgat tatcaatttg ttttaataaa atactgtttt attcggattt tgatatttgt
     5401 aatctttgcc tgttgctttg cggtagggag aaatcagcag gcagttcatt gtggaccggt
     5461 tgatgaacaa tgccgtctga aagggcttca gacggcattt tgttcggacg ggcgggctta
     5521 tttcgcagcc tgtccgccct ctttggcaaa atatttggcg tagatcttgt cgtattcgcc
     5581 gctttcgcgt actttttcca acgcatcgtt cagcattttg acggttgctt cgtcgccttt
     5641 gcgtaccgcg atgccgtagt gttcggtggt gaagtcgggc agggtaacga agtccattcc
     5701 tttggccggg ttgtttttca cataattggc gatgaccgcg ctgtcgctga ccacggaatc
     5761 caagccgccg ttttccagtt ctttgataat cagggggacg ttttcgaagc gcgcgatttt
     5821 cggattgtcg ttgcccaaga gtttggaaac ggagaaatcg cccgtgtggc cggtaaccac
     5881 gccgactttg ttcatctttt tcaaatcttc ggaagaagat acttttttgc ctttcggaac
     5941 gaggacgact tgggtgattt caaaatacgg gtcgctgaaa tccatagact gtttgcggtc
     6001 gtcggtaatg gttacgcccg acatcacaac gtccgcatcg ccgttgttca aggcggggaa
     6061 aaggctgtcc cacggctggt gtttgaattc gattttaaaa ttgcccgcct tcgccatcgc
     6121 gttcatcaaa tccacgtcga aaccttcgac attgcctttc gagtctaaag attcaaaggg
     6181 ggcaaactcg gcgttggaag ccacgcggta cactttgccg gggttggcgg caggcgcggc
     6241 ggcatctttg ccctgaccgc cgcaggcaga cagcgcgagt gcggaacagg caagggcggc
     6301 ggcaatccat tttttcatat tcatcaaaat tcctttcggt aatcaaaaag cctaaaaaat
     6361 cagtttaaca taaaattaac gttccttttc acggaaaaac gcataagtaa cgtcgtggaa
     6421 caaatccgta tgcgggctgt cctcatagct caattctgcc aaggcgtcct caaaagcaag
     6481 ctgaatcgac tcgaccgcga tttcggcggt gtctgcggga agggcgcgga tcagggcttt
     6541 gaaggcggtg gacaggacgt ggttctgcat acgcagcaca tcgtttgctt cttccagata
     6601 ttccaaacgc tgttcgatgc tgcccatgat gtatcctcgc gaatctgtta aaatgcgcca
     6661 ttatatcaaa ctgcgctttg ggcgcgggtt tgcccgcctg caaagattaa gaaccggaag
     6721 ccgaaaaaat ggatacaaac aatcaggata aagagccgaa ttgggaaaaa cgcctggaaa
     6781 acctgcgtca gacgcgccgt atgaataccg cgcctgccta tgtgccgctg accaaacctt
     6841 ctgaagtcgg aaaggaagag cccataccga aattggacga tgcaaaccga gaccgtgtgt
     6901 taaaggcgta tctgaagaaa tggcaggaag aacacaacag cgccgttgcc gattgcggcg
     6961 aggaagtcga aaccgacccg atgatcgtcc ttcaggaaaa ctggctcaac gcgcaggctt
     7021 ccctgcaaat gccggtttcg gaaaaacaca tcgaatcgcg gcggagaatc cggttcgatg
     7081 ccaaaaaaga cagtgccgaa tttgaaaccg cacagattga gggcggggaa aacgccgatg
     7141 cggcagaatc cggtacggcg gcagacgggg ttgcggaaaa cggcgaaggc ggtgcggaag
     7201 aggcgttgat gcccgtccaa atcaatatcc tgaacccgaa agccgtcaac cggcgcgaag
     7261 tgttctgcct gtccgaacag gagctgaccg aacggttgat caaacgcctg cgcccgcatc
     7321 tgaccgatac cgtcaacggc atgatccgta cggcggtgca gaagcagatg gcgctcttta
     7381 cttatcagct ccagcaaatg ctgcacgagc aggcgggtgc ggtagtcgaa gacgtgttgg
     7441 aacacgatgt ccgtaaaatc ctcaacgaca tcaagtacga attaaaatac aaacgctgat
     7501 tgccatgccg tctgaaagcc gtgttcagac ggcattttcc tgcccgtccg acttgaaagc
     7561 ctcatggaac aggcgcaaaa tattaataaa ttaaacaacg ggtgcacgcc ccgttgccga
     7621 acggacaaaa ccgaggaatc accgatgagc aaaaaacttc atccgcaaac gctcgccata
     7681 cgcggcggca aagaacaaac cggataccgc gaacacaatc aggcattgtt cctgaccagc
     7741 agcttcatgt gggacaacgc ccaacacgct gccgatttgt tttcaaaaaa aatcaaaggc
     7801 ttcacttata cccgtaccgc caacccgacc atcgcggcct ttgaaaaacg catagccgct
     7861 ttggaaggcg cggaacgcgc ggtcgccact tcgaccggca tgtccgcgat tcaggcggcg
     7921 tttttcacct tcctgcaggc gggcggccat gtggtttcca gccgcagcct gttcggcacg
     7981 accgtcggct ttatcaataa catcgttacc aaattcggca tcggagtgag ccgcgtgtcg
     8041 ccgactgata taaatgaatg gaaagccgcc gtcaaagcca acaccaaact gctgtttttg
     8101 gaaacgccgt ccaacccctt gggcgaagtg gccgacttgg aagccttggc ggaattggcg
     8161 cacggcatcg gcgcgctctt ggtggtggac aacagcctgc tgtcgcccgt cggctcgcag
     8221 cctttgaaac acggcgcgga tatttccgtt tcctccgcca ccaaagccat agacggacac
     8281 gggcgcgtga tgggcggcgt gttggcgggt tcggaagaac tgatggcgca ggtcgccgtt
     8341 tactgcaact cttgcggttt ggcgatgtcg ccgtttaacg cgtggcagtt gttgagcggc
     8401 gtggaaaccc tgtcgctgcg tatggaaaaa cagtttgaca acgccttgag aatcgcgcaa
     8461 tggctgcaag agcagccgca ggttcaagca gtgtactaca ccggattgcc cgaccatccg
     8521 caggcggagc ttatccgcaa acagcaaaac ggcggcggca tcgtcatcgg ttttgaagtc
     8581 gccgaccaag cagccgcgtg gaaagtcgtg gacggcgtgg aactcttttc ccgtaccgcc
     8641 aacctcggcg acgtgcgctc gaccatcacc aatccgtgga caaccacgca cggcaggatg
     8701 cagcccgaag aaaaactcgc cgccggtatc cgccccggac tggtgcgcct gtcggtcggt
     8761 ttggaatatg ttggcgattt gattgacgat ttgaaacagg cactcgcgcg ctgattgcgt
     8821 gtttcagacg gcatcggcgg aaaaatgcgg cagatgccgt ctgaaaccct tattgcgtat
     8881 ggcatacaca tcaacaatag gaaaaaatat ggatgaagcg gtttttgccg attgggcgtt
     8941 gaaaatctgc ctgaccggtt tgattatttt tttgggtttt atcgtttgga atttgggcaa
     9001 ggagtccaaa gcgggcaaat tcggcatcgc cgttttgttt ttggttttgg gcttgggtgt
     9061 gttcggtttt gtgttcaaag agttattgat taagtttttg gtattgccca aataggtttg
     9121 ccgtctgtcg aaatgccgtc tgaaatcata aaaagtaatc tgcaccctaa aagtttgatt
     9181 taaccgccaa ctgattaagg tgcgggtttt tatgacaaaa taaaaatcat ctttccgcaa
     9241 tcattcccac ggatgcgaaa gcctgtcttt ttgaatcccg gataatttta catcgtcatt
     9301 cccgcgcagg cgggaatcta gtccgttcgg tttcagtcat ttacgataaa ttcctgttgc
     9361 ctttcatttc cggattccca ctttcgcggg aatgacggag gagcggataa attctcgcaa
     9421 tctaaaacct tatatattgc gctccataag gggcgcatat ttttaatcct tgtaaagccc
     9481 cttaactcta gtcagtgaag gggcttaatc atgtttattt tctatactgt caatcccgaa
     9541 cacgtatatt tccccaaagc atacatcatg aaagtgttca aggataaagg ctacgaatcc
     9601 caatgcatca caacagtttc tttttatatc tgcaatccga ctttgaagca aaagaccgaa
     9661 aacgaagcgt atgaatacgg cagattgttt gttaaagaac tgatgcataa ggaatgcaac
     9721 cgtgaaagcc tttgaagata aagccttggc ggtgtccgcg gacatggcgg acgcgttagc
     9781 ggacggcggg gctgcggcaa ccgccgtagg ctgcccccct aggctaatag ggggggagca
     9841 aaataaaacc ccaaatccga agggtgcgga aaaaacagaa aaccaagaat ttcaattcga
     9901 gtatttcagt cattttgtat cggacggcaa aggcagattt atagaaatac cgttaaggcg
     9961 tggcagggat gacggagcgt tcatagacca aatcactttc acgatacatg aaaattccat
    10021 gacgaaagta accggaaagg gattggtatc agatacggaa ttcgttgtcc ggtatagcga
    10081 gctgcttgaa gaaatcttgg gattcggcat taccaaaaaa ttaccgttta aaggaaagtt
    10141 tttctatcaa agctgttatc aattcgggcc cgataacgtc gaatacggaa aggttcatta
    10201 cggcggccaa tgtgaaacga tgttggttga attgaacggt acaggctgca tggctgcttt
    10261 acccggttgg gaaaaccgat tgtatgaatt tttaagtaaa tgcgtccgac ccaaaataac
    10321 ccgtatcgat gtcgcccatg attttttcaa cggagagtac acacccgatc aggcaatgtt
    10381 agaccacgat aacggacatt acgacgtaca caatatgcgg ccaaaaagcg aatgtcgcgg
    10441 cacggcatgg cgcaatgaag acggcagtgg aaaaaccttt tacatcggca agcgcggaaa
    10501 ttcaaaattt acccgtgttt acgagaaagg cagacagctt ggagatgttg atagcccttg
    10561 ggtcaggttt gagggggata tagaaatacc cttggatgtc ctactttatt cggggtcgta
    10621 tctaggcggc gcatatccga tttgcaagga gatttttaag acagaagcca agcgcatgga
    10681 agtaaaagtt aaaaacgtta atctgatatt cgacgttaag ctttttcatg caaggaatca
    10741 agtcggcaag atggttaatt tcctccgcga tatagggtgg gacgatagca ggatagttga
    10801 tgagctggtg aaaggcgttg aaggttatcc aaaaggttta cagcctgagc aatacgattg
    10861 caaaaaccaa acgcagaaat tccagtatat ccacgaagaa cagaaagcca ttaacgcatt
    10921 gaacattgaa acactgtttg atgatttgat tgaagagaga gaatacgcat ttcctcaaga
    10981 cagggaatgg caacacatca aggatattga gtacgaggaa cgtcaaatat ccgatttttt
    11041 aaacaactga aggaaattga aaaatgtttg aaacaagcca agtaaccaca tataccgcca
    11101 ctttgttggg cgcaaaaaaa ttcaaaggcg aaatcgacgg taacaaaatc gattcatgca
    11161 ccgtcttggt agccagcccc atgccgtcaa acggcaatgc cgtgggcttt acctcggaaa
    11221 gcatgaagtt tggtgacagc cataattttg aaaaattgaa aaaccttaaa ttcccctgtg
    11281 cggttgatct aaccgttgcc atggaatcaa caggaaaagg cttagtgcag aaattgttgg
    11341 atttccaagt aaagggcgca gcacctaaag cctaagaaag gctgaatcat gagcagatac
    11401 caacagaaat ttatcgtaca agaattggaa aatcacgaat tcatctatcc cgattcgttt
    11461 ggcgatattg gatttacgtc gaacatcaaa tcagccggta aatatgacag ctatgaagac
    11521 gcattcagct cggcattgga agagataggc ggggaatttg taattttcgg attctacgaa
    11581 aaagaagatt aagtttaaga ggctcggcag gcggtctcta aaaccttcac aaagcccgca
    11641 aacacatttt tttaaaaatt tcgtaaagga aaatatcatg aaatttatta acacctgccg
    11701 taaatacggc gcaaaactgg ctgttgtaac agcc
//
LOCUS       DAXFZM010000073        11586 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.073, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000073 DAXFZM010000000
VERSION     DAXFZM010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11586)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11586)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11586
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.073"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            205..1917
                     /locus_tag="ACFJAG_001663"
     CDS             205..1917
                     /locus_tag="ACFJAG_001663"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0002161 - aminoacyl-tRNA editing activity
                     [Evidence IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0004827 - proline-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA];
                     GO_process: GO:0006433 - prolyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HFC3980907.1"
                     /translation="MKASQFFISTLKEAPAEAAFASHKLMIRAGLIKANASGLYTWMP
                     MGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHER
                     DFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDA
                     YSFHADYASLQATYDAMYDAYCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGE
                     DVIAYSDTSDYAANIELAPTLPLKGERAAAQAVLTKVHTPNVKTIESLVEFLNIPVEQ
                     TLKSIVVEGENEGELVLLLLRGDHEFNDIKAEKLAGVKSPLTMASPAAIVEQFGANGG
                     SLGPVGFTGKVYADFATEKGADWVIGANEDDYHYTGFNFGRDAAEPEFVDLRNVVEGD
                     ESPDGQGRLKLARGIEVGHVFQLRGKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVV
                     AAAIEQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADRIYAELLAAGADVLLD
                     DRDERAGVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRDNEAQAVAIGEIVARVTA
                     SLNA"
     gene            1980..2636
                     /locus_tag="ACFJAG_001664"
     CDS             1980..2636
                     /locus_tag="ACFJAG_001664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HFC3980908.1"
                     /translation="MASVFLEGEAVEVGNIFCIGRNYAAHVEELKNEIPSEPVVFMKP
                     SGSILNSGGTILLPEFSRDVQFECELVLLIGRDSDGTGEGEDILGCVAGYGVGLDLTA
                     RDIQCRLKAQGLPWLKAKGFRHSACVSDFAAADRIGNQDKVLFSLKQNGVLKQRGETG
                     LMIYPIREILHKLAADYGLGKGDLVFTGTPSGVGAIGAGDNLALELDGLVCASFTIGC
                     "
     gene            complement(2646..3101)
                     /gene="ruvX"
                     /locus_tag="ACFJAG_001665"
     CDS             complement(2646..3101)
                     /gene="ruvX"
                     /locus_tag="ACFJAG_001665"
                     /EC_number="3.1.21.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HFC3980909.1"
                     /translation="MHKIPKGTALAFDFGEARIGVAQGDAELGLSHPLATVTGGSNDE
                     KFAAIAKLVQEWQPRYFVVGLPVHADGTEHEMTHLSRKFGRRLNGRFNLPVYWVDERL
                     SSVYAESLLSEAQVLGKKRKSVLDQVAAQAILHGFLEGGPAECFNGREG"
     gene            complement(3094..3642)
                     /locus_tag="ACFJAG_001666"
     CDS             complement(3094..3642)
                     /locus_tag="ACFJAG_001666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HFC3980910.1"
                     /translation="MNLSNHFLVAMPDMEDAFFSQSVVYICKHDEDGALGIAINKPSP
                     ITMDMIFSATGKNIPMRMQHDSVMMGGPVQVERGYVVHTPIGNWQSSIGVSDGIALTS
                     SRDVLENISREGAVDKALISIGYSSWSKGQLERELADNAWLTVPADEHILFDIPYEHR
                     YAAAFAKLGIDPLALFSGAGHA"
     gene            complement(3644..4204)
                     /locus_tag="ACFJAG_001667"
     CDS             complement(3644..4204)
                     /locus_tag="ACFJAG_001667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CreA family protein"
                     /protein_id="HFC3980911.1"
                     /translation="MNRLLLLSAAVLPTACGSGETDKIGRASTVFNMLGKNDRIEVEG
                     FDDPDVQGVACYISYAKKGGLKEMVNLEEDASDASVSCVQTASSISFDETAVRKPKEV
                     FKRGTGFAFKSRQIVRYYDPKRKAFAYLVYSDKIVQGSPKNSLSAVSCFGSGIPQTDG
                     VQADTSGKLLAGACIISNPIKNPDKR"
     gene            4531..6327
                     /locus_tag="ACFJAG_001668"
     CDS             4531..6327
                     /locus_tag="ACFJAG_001668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HFC3980912.1"
                     /translation="MQYKPLLLALMLVFSTPAVAAHDAAHNRSAEVKKQAKNKKEQPE
                     AAEGKKEKGKNAAVKDKKTGGKEAAKEFKKTAKNRKEAEKEATSRQSARKGREGDKES
                     KAEHKKAHGKPVSGSKEKNAKTQPENKQGKKGAKGQGNPRKGGKAEKDTVSANKKARS
                     DKNGKAVKQDKKYREEKNAKTDSDELKAAVAAATNDVENKKALLKQSEGMLLHVSNSL
                     KQLQEERIRQERIRQERIRQARGNLASVNRKQREAWDKFQKLNTELNRLKTEVAATKA
                     QISRFVSGNYKNSRPNAVALFLKNAEPGQKNRFLRYTRYVNASNREVVKDLEKQQKAL
                     AVQEQKINNELARLKKIQANVQSLLKKQGVTDAAEQTESRRQNAKISKDARKLLEQKG
                     NEQQLNKLLSNLEKKKAEHRIQDAEAKRKLAEARLAAAEKARKEAAQQKAEARRAEMS
                     NLTAEDRNIQAPSVMGIGSADGFSRMQGRLKKPVDGVPTGLFGQNRSGGDVWKGVFYS
                     TAPATVESIAPGTVSYADELDGYGKVVVIDHGENYISIYAGLSEISAGKGYTVAAGSK
                     IGTSGSLPDGEEGLYLQIRYQGQVLNPSGWIR"
     gene            6454..7929
                     /locus_tag="ACFJAG_001669"
     CDS             6454..7929
                     /locus_tag="ACFJAG_001669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HFC3980913.1"
                     /translation="MSKPVFKKIALYTLGAISGVAVSLAVQGFAAEKDGRDNEVLPVQ
                     SIRTMAEVYGQIKANYYHDKPDADLFEGAMKGMVAGLDPHSEYMDKKGYAEIKESTSG
                     EFGGLGMEIGQEDGFVKVVSPIEDTPAERAEVKSGDFIVKIDNVSTRGMTVSEAVKKM
                     RGKPGTKITLTLSRKNADKPIVVNLTRAIIKVKSVRHHLIEPDYGYIRVSQFQERTVE
                     SVNTAAKELVKENKGKPLKGLVLDLRDDPGGLLTGAVGVSAAFLPSEAVVVSTKGRDG
                     KDGMVLKAVPEDYVYGMGGDPLAGIPAELKTIPMTVLVNSGSASASEIVAGALQDHKR
                     AVIVGTQSFGKGSVQTLIPLSNGSAVKLTTALYYTPNDRSIQAQGIVPDVEVKDKERT
                     FESREADLVGHIGNPLGGEDVNSETLAVPLEKDADKPAAKEKGKKKKDEDLSSRRIPN
                     PAKDDQLRKALDLVKSPEQWQKSLGLAAKKPVSNKDKKDKK"
     gene            8259..10286
                     /gene="uvrB"
                     /locus_tag="ACFJAG_001670"
     CDS             8259..10286
                     /gene="uvrB"
                     /locus_tag="ACFJAG_001670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrB"
                     /protein_id="HFC3980914.1"
                     /translation="MEVIRYPNSPFKLHQPFPPAGDQPTAIAGLIEGLSDGLAYQTLL
                     GVTGSGKTYTMANVIAQSGRPAIIMAHNKTLAAQLYAEMREFFPENAVEYFVSYYDYY
                     QPEAYVPSRDLFIEKDSAINEHIEQMRLSATKNLMTRDDVIIVATVSAIYGIGDPTEY
                     QQMVLSVKEGDTIEQRDIIATLVSMQYERGDLDFKRGSFRVRGDVIDVYPAESSENAL
                     RISLFDDEIDRLDMFDPLSGSLHQRVGRYTVFPSSHYVTPRDTVLRACESIKEELRER
                     IEFFAREQRPVEQQRIEQRTRFDLEMLYEMGFCKGIENYSRHFSGKKEGEPPPTLMDY
                     LPDNAIMFIDESHVTVTQIGGMYKGDASRKQNLVDYGFRLPSARDNRPLKFHEFEKVM
                     PQTVFVSATPAKYEEEHAGQVVEQVVRPTGLVDPQIIIRPVATQVDDLMSEINDRIQK
                     GERVLVTTLTKRMAEQLTDYYSELGIKVRYLHSDIDTVERVEIIRDLRLGLFDVLVGI
                     NLLREGLDIPEVSLVAILDADKEGFLRSHRSLIQTIGRAARNVNGVAILYADKITDSM
                     KAAVDETERRREKQIKFNEEHGIVPQQIKKQVKDIIDGVYHEEDSGKGRRQGKNKVKV
                     GEIHNEEDAIKEIAKLEKAMQQAARDLQFEEAAVLRDRIRNIKENLLFGAE"
     gene            complement(10464..11222)
                     /gene="cah"
                     /locus_tag="ACFJAG_001671"
     CDS             complement(10464..11222)
                     /gene="cah"
                     /locus_tag="ACFJAG_001671"
                     /EC_number="4.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HFC3980915.1"
                     /translation="MPRFPRTLPRLTAVLLLACTAFSAAAHGNHTHWGYTGHDSPESW
                     GNLSEEFRLCSTGKNQSPVNITETVSGKLPAIKVNYKPSMVDVENNGHTIQVNYPEGG
                     NTLTVNGRTYTLKQFHFHVPSENQIKGRTFPMEAHFVHLDENKQPLVLAVLYEAGKTN
                     GRLSSIWNVMPMTAGKVKLNQPFDASTLLPKRLKYYRFAGSLTTPPCTEGVSWLVLKT
                     YDHIDQAQAEKFTRAVGSENNRPVQPLNARVVIE"
BASE COUNT         3002 a         2933 c         3177 g         2474 t
ORIGIN      
        1 aaattaggca aatttaaatc tataaaaatc atgtaattat gttcaatatg atgtttctgg
       61 tcatgttttt gccgtctgtt atggggtttg tcccgcgttt ggggcagggg gtgaattttg
      121 gaggttggtg caaaacctgc ttttttcgcg ttacaatctg cacccgattt acttttgaat
      181 ctgcctgttt ggaaaaatac ttttatgaaa gccagccaat tctttatctc tactttaaaa
      241 gaagcccctg ccgaagccgc gtttgccagc cacaagctga tgattcgcgc cggtctgatt
      301 aaagccaacg cgtccggtct ttatacttgg atgccgatgg ggctgcgcgt gttacgcaaa
      361 gtcgaaaacg tcgtgcgcga ggaaatggcg cgcgcgggca gcgtggagct gctgatgccg
      421 gtggtgcagc ctgccgaact gtggcaggaa tccggccgct gggagtttta cggtaaagaa
      481 ctgctgcgcc tgaaagaccg ccacgaacgc gatttctgca tgggcccgac ctgcgaggaa
      541 gtcatcgccg acatcgtgcg caaagaaatc aacagctaca aacaactgcc gaaaaatttt
      601 taccacatcc aaaccaaatt ccgcgacgaa gtgcgcccgc gtttcggcgt gatgcgcgcg
      661 cgcgaatttg tgatgaaaga tgcttattcc ttccacgccg actacgcctc gcttcaggcg
      721 acctatgatg ccatgtatga cgcttactgc cgcatcttta cccgtctggg tttggcgttc
      781 cgccccgtcg ccgcagacac cggcagcatc ggcggtacgg gttcgcacga gtttcaagtg
      841 ttggcggaaa gcggcgaaga tgtgattgca tacagcgaca cttccgatta cgccgccaat
      901 atcgagttgg caccgacctt gccgcttaaa ggtgaacgtg ccgccgctca ggctgtgttg
      961 accaaagtac atacaccaaa cgtcaaaacc attgagtctt tggttgaatt cctgaatatt
     1021 ccggttgaac aaaccctcaa atccatcgtg gttgaaggcg aaaacgaagg cgaactcgtc
     1081 ctactgctgt tgcgtggcga ccatgagttt aacgacatca aggcagaaaa actggcgggc
     1141 gtaaaatcgc cactgactat ggcaagccct gccgcgattg ttgaacaatt cggcgcaaac
     1201 ggcggttcgc tcggccccgt cggcttcaca ggcaaagtct atgccgattt cgctaccgaa
     1261 aaaggcgcgg actgggttat cggcgcaaac gaagacgact accactatac cggcttcaac
     1321 ttcggccgcg atgccgccga gcctgaattc gtcgatttgc gtaatgtggt cgaaggcgac
     1381 gaaagccccg acgggcaagg ccgtctgaaa ctggcgcgcg gcatcgaagt cggacatgtc
     1441 ttccagttgc gcggcaaata tacccaagct atgaacgtca gcttcctcga caataacggc
     1501 aaatcgcaaa tcatggaaat gggctgctac ggcatcggca tcacccgcgt cgttgccgcc
     1561 gccatcgagc agaataacga cgaaaaaggc atcatttgga ccaaagcgat ggcgccgttt
     1621 gaagtcgtca tcgtgccgat gaactacaaa aaatccgaca ctgtgcgtga agccgccgac
     1681 agaatctatg ccgaattgct ggcggcaggc gcggatgtgc tgctggacga ccgcgacgaa
     1741 cgcgcaggcg tattgctgaa cgattccgag cttctcggta tcccgcaccg catcgtcatc
     1801 ggcgaccgcg ccttgaaaga aggcaatgtc gaatacgccg aacgccgcga caacgaagcg
     1861 caggcagttg caatcggaga aattgttgcg cgtgtaacag cttcattaaa tgcgtaagtc
     1921 tggtcaaatg ccgtctgaaa ataatttcag acggcatttt tattttgggg gaaagtgaag
     1981 tggcttcagt atttttagaa ggagaagcag tcgaggtcgg caatattttc tgtatcggca
     2041 ggaactatgc cgcacatgtc gaagagttaa aaaacgaaat accttcagaa cctgtggtgt
     2101 ttatgaagcc gtcaggcagc attttgaaca gcggcggtac aatcttgctg cccgagttca
     2161 gtagggatgt gcagtttgag tgcgaactag tgttgctgat tggccgggat tcagacggca
     2221 cgggcgaggg tgaagatatt ttgggatgcg tggcggggta cggcgtgggt ttggatttga
     2281 ccgcgcggga catccaatgc cgtctgaagg cgcaggggct gccctggctg aaggcaaaag
     2341 ggttcaggca ttctgcgtgc gtgtcggatt ttgcggcggc agacagaatc ggcaatcaag
     2401 ataaggtgtt gttttcatta aaacaaaacg gcgtattgaa acagcgcggg gagactggtt
     2461 tgatgattta cccgattcgg gaaattttac acaaactggc ggcggattac ggtttgggga
     2521 aaggggattt ggtgtttacc ggaacgccct ccggcgtggg cgcaatcggt gcgggggaca
     2581 atttggcatt ggagctggac ggcttggtgt gcgcctcttt cacgataggg tgttaaccgc
     2641 gccgcttaac cttcacgccc gttgaaacat tccgccgggc cgccctcgag aaaaccgtgc
     2701 aggatggctt gcgccgccac ttggtcgagc accgatttgc gttttttgcc caagacctgt
     2761 gcttccgaaa gcaggctttc ggcatagacg gacgacagcc gttcgtcaac ccaatagacg
     2821 gggagattga acctgccgtt cagcctgcgt ccaaacttgc gcgacaggtg cgtcatttca
     2881 tgttccgtgc cgtcggcatg cacgggcagt ccgacgacaa aataacgcgg ctgccattct
     2941 tgaaccagct tggcgattgc cgcgaatttt tcatcgttgc tgccgccggt aacggtggcc
     3001 agcggatggg acagccccaa ttccgcatcg ccctgcgcca cgccgatgcg cgcttcgccg
     3061 aagtcgaatg ccagtgccgt tccttttgga attttatgca tggccggctc ccgaaaacag
     3121 ggcgagcggg tcgatgccga gtttggcgaa tgcggcggcg taacggtgtt cgtaggggat
     3181 gtcgaacagg atgtgttcgt cggcgggaac ggtcagccac gcattgtcgg caagttcgcg
     3241 ttcgagctgc cctttgctcc agctcgaata gcctatgctg atcaaggctt tgtcaaccgc
     3301 gccttcgcgt gaaatgtttt caagcacatc gcgggaagag gtcagcgcga tgccgtctga
     3361 aacgccgatg ctgctttgcc agttgccgat cggagtgtgg acgacgtaac cgcgctcgac
     3421 ctgcaccggc ccgcccatca tcacgctgtc gtgctgcatc cgcatgggga tgtttttgcc
     3481 ggtggcggaa aaaatcatgt ccatcgtaat cggagagggt ttgttgatgg cgataccgag
     3541 tgcgccgtct tcatcgtgtt tgcagatata gacgaccgat tgtgaaaaaa acgcgtcttc
     3601 catatcgggc atggcgacga gaaagtggtt ggacaggttc atatcagcgt ttgtcgggat
     3661 tttttatcgg gttggaaata atgcaggcgc cggcaagcag tttgccggaa gtatcggctt
     3721 gcaccccgtc ggtttgcggt atgccgctgc cgaaacagga aaccgcgctt aaggaatttt
     3781 tcggcgatcc ttggacgatt ttatcgctgt aaaccaaata ggcgaaggct ttgcgtttgg
     3841 ggtcgtaata acggacaatc tgccggctct tgaacgcgaa gcccgtaccg cgcttgaaaa
     3901 cttctttcgg tttgcgcacg gcggtttcgt caaaagaaat cgaagatgcc gtctgaacgc
     3961 acgaaaccga tgcgtcggac gcgtcctctt ccaaattgac catttccttc aagccgcctt
     4021 tttttgcata cgaaatataa caggcaaccc cttgaacgtc gggatcgtcg aatccttcca
     4081 cttcgatacg gtcgtttttg cccaacatgt tgaaaacggt acttgcccgt ccgattttat
     4141 cggtttcgcc gctgccgcag gcagtcggca ggacggcggc agacagcagt agcagtctgt
     4201 tcatcaaaat ttccttatcg gttgaatccc cgttttccgg aaggcggcag ggtttgcttt
     4261 gtttggaggg gcgcacgctc ccaaatcggg caacatacgg tacgcagctt acatgtgcta
     4321 ccctgtgtgt cggaacacaa tatccgttgc agcattgaaa atatgccgca caatataagg
     4381 ctgtttgagc cgattgcaag tatccgcgca aagaaggtgc aagattgggc aaacggcatt
     4441 ttcagacggc ataactgaca gtataatccg aacatccggc cgctttcgcg cggccttcag
     4501 cattatccga ttttttctga aagccgaacc atgcaataca aacccctcct gcttgccctg
     4561 atgctcgttt tttccacgcc cgccgttgcc gcccacgacg cggcacacaa ccgttccgcc
     4621 gaagtgaaaa aacaggcgaa gaacaaaaaa gaacagcccg aagcggcgga aggcaaaaaa
     4681 gaaaaaggca aaaatgccgc agtgaaagat aaaaaaacag gcggcaaaga ggcggcaaaa
     4741 gagttcaaaa aaaccgccaa aaaccgcaaa gaagcagaga aggaggcgac atccaggcag
     4801 tctgcgcgca aaggacgcga aggggataag gaatcgaagg cggaacacaa aaaggcacat
     4861 ggcaagcccg tgtccggatc caaagaaaaa aacgcaaaaa cacagcctga aaacaaacaa
     4921 ggcaaaaaag gggcaaaagg acagggcaat ccgcgcaagg gcggcaaggc ggaaaaagac
     4981 actgtttctg caaataaaaa agcccgttcc gacaagaacg gcaaagcagt gaaacaggac
     5041 aaaaaataca gggaagagaa aaatgccaaa accgattccg acgaattgaa agccgccgtt
     5101 gccgctgcca ccaatgatgt cgaaaacaaa aaagccctgc tcaaacaaag cgaaggaatg
     5161 ctgcttcatg tcagcaattc cctcaaacag cttcaggaag agcgtatccg ccaagaacgt
     5221 atccgccaag agcgtatccg tcaggcgcgc ggcaaccttg cttccgtcaa ccgcaaacag
     5281 cgcgaggctt gggacaaatt ccaaaaactc aataccgagc tgaaccgttt gaaaacggaa
     5341 gtcgccgcta cgaaagcgca gatttcccgt ttcgtatcgg ggaactataa aaacagccgg
     5401 ccgaatgcgg ttgccctgtt cctgaaaaac gccgaaccgg gtcagaaaaa ccgctttttg
     5461 cgttatacgc gttatgtaaa cgcctccaat cgggaagttg tcaaggattt ggaaaaacag
     5521 cagaaggctt tggcggtaca agagcagaaa atcaacaatg agcttgcccg tttgaagaaa
     5581 attcaggcaa acgtgcaatc cctgctgaaa aaacagggtg taaccgatgc ggcggaacag
     5641 acggaaagcc gcagacagaa tgccaaaatc tccaaagatg cccgaaaact gctggaacag
     5701 aaagggaacg agcagcagct gaacaagctc ttgagcaatt tggagaagaa aaaggccgaa
     5761 caccgcattc aggatgcgga agcaaaaaga aaattggctg aagccagact ggcggcagcc
     5821 gaaaaagcca gaaaagaagc ggcgcagcag aaggctgaag cgcgacgtgc ggaaatgtcc
     5881 aacctgaccg ccgaagacag gaacatccaa gcgccttcgg ttatgggtat cggcagtgcc
     5941 gacggtttca gccgcatgca gggacgtttg aaaaaaccgg ttgacggtgt gccgaccggg
     6001 cttttcgggc agaaccggag cggcggcgat gtttggaaag gcgtgttcta ttccactgcg
     6061 cctgcaacgg ttgaaagcat tgcgccggga acggtaagct atgcggacga gttggacggc
     6121 tacggcaaag tggtcgtgat cgatcacggc gagaactaca tcagcatcta tgccggtttg
     6181 agcgaaattt ccgccggcaa gggttatacg gtcgcggcag gaagcaaaat cggcacgagc
     6241 gggtcgctgc cggacgggga agaggggctt tacctgcaaa tacgttatca aggtcaggtg
     6301 ttgaaccctt cgggctggat acgttgatcg gattgccgaa acggcaggct ttatgcaaat
     6361 cgtgccgata tggtgcgctg ttccgtgaag tttgccgttt gccgtacctg tgttttccgg
     6421 tttttggaaa tcaagagaga aagttaaaga agaatgtcga aacctgtttt taagaaaatc
     6481 gcactttata ctttgggtgc aatcagcggc gtggccgtaa gtctggcggt gcagggtttt
     6541 gccgccgaga aggacgggcg ggataacgaa gtcctgccgg tgcaatccat ccgtacgatg
     6601 gcggaggttt acggtcagat taaggcaaac tactatcatg acaaacccga tgccgatttg
     6661 tttgaaggtg cgatgaaggg tatggtggcc ggtttggatc cgcattccga atatatggat
     6721 aaaaaaggtt atgccgagat aaaggagtcc accagcggcg aatttggcgg cttggggatg
     6781 gaaatcgggc aggaagacgg ttttgtcaaa gtggtttcgc cgattgagga cacgcctgcc
     6841 gaacgggcgg aggtgaaaag cggcgatttc attgtgaaaa tcgataatgt ttcgacgcgc
     6901 ggtatgacgg tcagcgaagc ggtgaaaaaa atgcggggca agccgggtac gaagattact
     6961 ttgacgctgt cgcgcaaaaa tgccgacaag ccgatagtcg tcaacctgac ccgtgccatt
     7021 attaaagtga aaagcgtccg ccatcacctg atcgaacccg attacggcta tatccgcgtg
     7081 tcgcagttcc aagagcggac ggtcgaaagc gtcaataccg ccgcaaaaga gctggtaaag
     7141 gaaaataaag gaaaaccgct caaggggctg gtgttggatt tgcgcgacga ccccggcggg
     7201 cttttgaccg gcgcggtcgg cgtgtcggcg gcgtttctgc cgtctgaagc ggtcgtcgtc
     7261 agcaccaagg gacgcgacgg caaagacggc atggtactga aagccgttcc cgaggattat
     7321 gtgtacggta tgggcggcga ccctttggcg ggtattcctg ccgagttgaa aacgattccg
     7381 atgacggtat tggtcaattc cggttcggct tccgcgtcgg agattgtcgc cggcgcattg
     7441 caggaccaca aacgcgcggt catcgtcggt acgcagagct tcggtaaagg ttcggttcag
     7501 actttgattc ctttgtccaa cggcagcgcg gtcaagttga cgaccgccct gtattacacg
     7561 ccgaacgacc gttccattca ggcacagggg attgttcccg atgtcgaagt aaaagataag
     7621 gaacgtactt ttgaaagccg cgaggcggac ctggtcggac acatcggcaa tcccttgggc
     7681 ggcgaggatg tgaacagtga aacccttgcc gtaccgcttg aaaaagatgc ggataagccc
     7741 gctgcaaaag aaaaaggtaa aaagaaaaag gacgaggatt tgtcttcaag gcggattccg
     7801 aaccctgcga aagacgatca gttgcgtaag gctttggatt tggtcaagtc gcccgagcag
     7861 tggcagaagt ctttggggct ggcggcgaaa aaaccggttt caaataaaga taaaaaagat
     7921 aagaagtagg ttttgacgat gccgtctgaa aggatttcag acggcatatt atgtttgaaa
     7981 ggacaggtta tgagcgattt tttaccggaa tttgaaccgt gcggcattta tagtggatta
     8041 acaaaaatca ggacaaggcg acgaagccgc agacagtaca aatagtacgg caaggcgagg
     8101 taacgccgga ccggtttaaa tttaatccac tatacttggg tagcgattgg gtttcagacg
     8161 gcatacattc aggatttcac cgccttatac cgtctgaaag acgtttctga cccatcccta
     8221 ctacacgctt tgtccgcaaa cgtatcacag gcaagattat ggaagttatc cgatacccaa
     8281 attccccctt caaactccac caacccttcc cgcccgcagg cgaccagccc accgccattg
     8341 cgggcctgat cgaagggctt tcagacggcc ttgcctacca aaccctgctc ggcgtaaccg
     8401 gttcgggcaa aacctacacg atggcgaacg tcatcgcgca aagcggcaga cccgccatca
     8461 ttatggcgca caacaaaacc cttgccgccc agctttatgc cgaaatgcgc gagtttttcc
     8521 ccgaaaacgc agtggaatat ttcgtgtcgt attacgacta ttaccagccc gaagcctatg
     8581 tgcccagccg cgatttgttc atcgaaaaag acagcgcgat caacgaacac atcgagcaga
     8641 tgcgcctttc cgccaccaaa aacctgatga cgcgcgacga cgtgattatc gtcgccaccg
     8701 tgtccgccat ttacggtatc ggcgacccga ccgagtatca acaaatggtg ctgtccgtaa
     8761 aagaaggcga caccatcgag cagcgcgaca tcatcgccac gctcgtttcc atgcagtacg
     8821 aacgcggcga tttggacttc aaacgcggca gcttccgcgt gcgcggcgac gtgattgacg
     8881 tgtaccccgc cgaaagctcc gaaaacgcct tgcgtatcag cctgtttgat gacgaaatcg
     8941 accgcctcga tatgttcgac ccgctttcag gcagcctgca ccagcgtgtc ggacgctaca
     9001 ccgtcttccc gtccagccac tacgttaccc cgcgcgacac cgtattgcgc gcctgcgaat
     9061 ccatcaaaga agaattgcgc gaacgcatcg aatttttcgc tcgcgaacaa cgccccgtcg
     9121 agcaacaacg catcgaacag cgcacccgtt tcgacctcga aatgctctac gaaatgggct
     9181 tctgcaaagg cattgaaaac tactcccgcc acttctccgg taaaaaagaa ggcgaaccgc
     9241 cgcccacgct gatggactac ctgcccgaca acgccatcat gttcatcgac gaaagccacg
     9301 ttaccgttac ccaaatcggc ggcatgtaca aaggcgacgc atcgcgcaag caaaacctcg
     9361 tggactacgg cttccgcctg ccttccgccc gcgacaaccg cccgctcaaa ttccacgaat
     9421 ttgaaaaagt catgccgcaa accgtcttcg tttccgccac ccccgcgaaa tacgaagaag
     9481 aacacgccgg acaagtcgtc gaacaagtcg tccgccccac agggctggtc gacccccaaa
     9541 tcatcatccg ccccgtcgcc acccaagtcg acgatttaat gagcgaaatc aacgaccgta
     9601 ttcaaaaagg cgaacgtgtg ctcgttacca ccctcaccaa acgcatggcg gagcaactca
     9661 ccgactatta cagcgaactc ggcatcaaag tgcgctacct gcacagcgac atcgacaccg
     9721 tcgagcgcgt tgaaatcatt agagatttgc ggctcggcct gtttgacgta ctcgttggca
     9781 tcaacctgtt gcgcgaaggc ctcgacatcc ccgaagtgtc cctcgtcgcc atcctcgatg
     9841 ccgacaaaga aggcttcctg cgctcccacc gcagcctgat tcaaaccata ggccgcgccg
     9901 cgcgcaacgt gaacggcgtc gccatcctgt acgccgacaa aattaccgac tccatgaaag
     9961 ccgccgtcga cgaaaccgaa cgccgccgcg aaaaacagat taaattcaac gaagaacacg
    10021 gtatcgtgcc gcagcagatt aaaaaacagg tcaaagacat catcgacggc gtgtaccacg
    10081 aagaagacag tggcaaaggc cgtagacaag gcaaaaacaa ggtcaaagtc ggcgaaatcc
    10141 acaacgaaga agacgcgatt aaagaaatcg ccaaactgga aaaagccatg cagcaggcgg
    10201 ctagggattt acagtttgaa gaagctgctg tgttgaggga taggattagg aatattaaag
    10261 agaatttgtt gtttggggcg gagtgatttt gaaatagtaa tcgcagcctg aatacatagc
    10321 gtgtgcgcca ctggcgcgcg ctcattgtgt tatcaggaat ccttgaaatc atgtacgcag
    10381 cttgcatcac acatcctagc tatacataaa caacaaggcc gtctgaattt tcagacggcc
    10441 ttttccgttt acaactttac tacttattca ataactacac gtgcattcag aggctgtacg
    10501 gggcggttgt tttccgaacc gacggcgcgg gtgaattttt ccgcttgcgc ttggtcgatg
    10561 tggtcataag ttttcaacac caaccatgat acgccctctg tgcacggcgg cgtggtcagc
    10621 gaaccggcaa agcggtagta tttcaaccgt ttcggcagta gggtggatgc gtcgaacggt
    10681 tggttgagtt tcacttttcc tgcggtcatc ggcatgacgt tccagatgga agacaggcgg
    10741 ccgttggttt tgccggcttc atacagcacg gctaatacta aaggctgttt gttttcgtct
    10801 aagtggacga agtgagcttc catcgggaaa gtgcggcctt tgatttggtt ttcgctcggc
    10861 acgtggaagt ggaactgttt cagggtatag gtgcggccgt tcacggtcag ggtattgccg
    10921 ccttcgggat aattgacctg aatggtgtgg ccgttgtttt ccacgtcaac catactcggt
    10981 ttgtaattga ctttgatggc gggcagtttg ccggaaacgg tttcggtaat gtttaccgga
    11041 gattggtttt tgccggtgga gcacaaacgg aattcttctg acagattgcc ccagctttcg
    11101 ggagagtcgt gtccggtata gccccaatgg gtgtgattgc cgtgtgcggc ggcggagaaa
    11161 gcggtacagg ccaacagcag gacagcggtc aggcggggta aagtgcgggg gaaacgaggc
    11221 attgtaagat cctttctatt aaggagtaga aaaaaggttg cagtgtgtat gtaaatattt
    11281 tattttttat taaatgatat ctatattaag tgcttaagtc aaacttcccg gtctgaaaac
    11341 cattagagca atgaaattaa agtgaattta tttttctata agtcctgctt tatttggata
    11401 accatgaggc atggctacct ttatccggaa aaatattaat agccgcaaca aagatatttg
    11461 aatccgattc aaatatcacc agcaagcgta gctcggatac ttgtatccga caaagccttt
    11521 aacatttcca tcgttgcaat ccattgcagc aattaccaaa atgtcggatt cgagaatccg
    11581 atctac
//
LOCUS       DAXFZM010000074        11520 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.074, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000074 DAXFZM010000000
VERSION     DAXFZM010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11520)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11520)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11520
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.074"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            125..841
                     /locus_tag="ACFJAG_001672"
     CDS             125..841
                     /locus_tag="ACFJAG_001672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HFC3980916.1"
                     /translation="MNFENDDIIHAPTTSSLILEERHDSELFRVYALILDGITDQVLL
                     PGKKLTESELCRQMVCSRNTVRGALSLLAHDKIVDLQPNRGAFVHVPDLKEMQDVFNA
                     RIEMETMILNILAGLPDLETRLKPLYAMIRCEEEASGRGDRVGWNRLSNAFHVELARL
                     VGNDVLFDIMNTLCARSSLIVAVAGVHREKKHAINTHTHSEHREILDLLLAGRRNRVV
                     KILRRHLGNCMERLEKTLED"
     gene            990..1892
                     /locus_tag="ACFJAG_001673"
     CDS             990..1892
                     /locus_tag="ACFJAG_001673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine exporter LysO family protein"
                     /protein_id="HFC3980917.1"
                     /translation="MSSLMTLFSVLVPMFAGFFIRVPKPYLPASDKVLSVLVYAVLLL
                     IGVSLSRVEDLGSRLGDMALTVLWLFVCTVGANLLALAVLGKLSPWRIGGKGKGVSVG
                     VSGSVRQLGCVLIGFVSGKLMCDIWMPSENAGMYCLMLLVFLIGVQLKSSGVSLRQVL
                     LNRRGIRLSVWFILSSLSGGLLFAASADGVSWTKGLAMASGFGWYSLSGLVMTEAYGA
                     VWGSIMLLNDLARELFALAFIPLLMKRFPDAAVGVGGATSMDFTLPVIQGAGGLEVVP
                     VAVSFGVVVNIAAPFLMVVFSTLG"
     gene            1935..2709
                     /locus_tag="ACFJAG_001674"
                     /pseudo
     CDS             1935..2709
                     /locus_tag="ACFJAG_001674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742658.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR family DNA-binding transcription
                     regulator"
     gene            2821..4509
                     /locus_tag="ACFJAG_001675"
     CDS             2821..4509
                     /locus_tag="ACFJAG_001675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004819 - glutamine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006425 - glutaminyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--tRNA ligase/YqeY domain fusion
                     protein"
                     /protein_id="HFC3980918.1"
                     /translation="MLNKDQFADNHFIRTIIEDDLKSGKHEAVQTRFPPEPNGYLHIG
                     HAKSICLNFGLAYIYDGLCNLRFDDTNPEKENDEYVNAIKEDVEWLGFHWAGEPRFAS
                     DYFDRLYDYAVGLIKDGKAYVDDLTPEEMREYRGTLTEAGKNSPYRDRSIEENLDLFT
                     RMKNGEFPDGSKTLRLKIDMAAGNINMRDPVIYRIRRAHHHNTGDKWCIYPMYDYTHC
                     ISDAIEGITHSLCTLEFEAHRPLYDWVLDNIPAPHATRPRQYEFSRLELLYTITSKRK
                     LNQLVVEKHVSGWDDPRMPTISGMRRRGYTPEGVRLFAKRAGISKSENIVDMSVLEGA
                     IREELENSAPRLMAVLNPLKVTLTNFQAGKTQSRRAAFHPNHEEMGDREVPVSQTIYI
                     EADDFAENPPKGFKRLIPGGEVRLRHGYVIKCGEVVKDEAGNVVELKCSIDHDTLGKN
                     PEGRKVKGVIHWVSAEHAAEIKVRLYDRLFTVERPGAVRGEDGEYLPFTDFLNPESVK
                     EITAYAEPAAKDLPAESRWQFERIGYFVTDRQDHGKDTPVFNRTVTLKDSWQPK"
     gene            4601..5557
                     /gene="gshB"
                     /locus_tag="ACFJAG_001676"
     CDS             4601..5557
                     /gene="gshB"
                     /locus_tag="ACFJAG_001676"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004363 - glutathione synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione synthase"
                     /protein_id="HFC3980919.1"
                     /translation="MKVLFIADPMASFKTYKDTTYAMMREMAKRGWRLFHTLSGELSV
                     NGGLVTAQASAFEFSGAKNDDDHEWFKAADKVQTALKEFDAVIMRTDPPFDMQYLYST
                     QLLTLAEQQGAKVFNSGRAMRDFNEKLAILNFSRFTAPTLVTTRSADVRAFLKEHGDI
                     IVKPLDGMGGMGIFRLTEKDPNIGSILETLMRFDSRTIMAQRYIPEIVHGDKRILIIG
                     GKVVPYALARIPQNGETRGNLAAGGRGVAQELDGRDREIAETLAPELKRSGILLAGLD
                     VIGSNLTEVNVTSPTGFQEIMKQKSFDVAAMFADAVAAWSVR"
     gene            5716..6099
                     /locus_tag="ACFJAG_001677"
     CDS             5716..6099
                     /locus_tag="ACFJAG_001677"
                     /EC_number="2.7.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004143 - ATP-dependent diacylglycerol
                     kinase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006654 - phosphatidic acid biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HFC3980920.1"
                     /translation="MEPSSYAAEKKGKSGIRRVINAFGYSIDGIAAAYRYEAAFRQVL
                     WLNALLVCAAFFWVSETAVRLPLIIASFVSVIVELFNTAVEAAVDHTSTEKHELAKRA
                     KDAGSAAQLVAMLMLAAVWLSALFG"
     gene            6231..6704
                     /locus_tag="ACFJAG_001678"
     CDS             6231..6704
                     /locus_tag="ACFJAG_001678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016531 - copper chaperone activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="copper chaperone PCu(A)C"
                     /protein_id="HFC3980921.1"
                     /translation="MKKLLAAVMMAGLAGAVSAAGVHVEDGWARTTVEGMKMGGAFMK
                     IHNDEAKQDFLLGGSSPVADRVEVHTHINDNGVMRMREVKGGVPLEAKSVTELKPGSY
                     HVMFMGLKKQLKEGDKIPVTLKFKNAKAQTVQLEVKTAPMPAMNHGHHHGEAHQH"
     gene            6829..7932
                     /gene="mnmA"
                     /locus_tag="ACFJAG_001679"
     CDS             6829..7932
                     /gene="mnmA"
                     /locus_tag="ACFJAG_001679"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HFC3980922.1"
                     /translation="MNTTSNTSNIIVGLSGGVDSSVTAALLKQQGYQVRGVFMQNWEN
                     DDNDEYCSIKQDSFDAIAVADIVGIDIDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDV
                     LCNAEIKFKCFLDYAVGQGADTIATGHYARKEVRNGVHYLLKGLDRNKDQSYFLYRLK
                     PFQLERAIFPLGGLEKPEVRRLAAEFNLPTAAKKDSTGICFIGERPFREFLQKYLPTD
                     NGKMVTPEGKTIGEHVGLMFYTLGQRKGLGIGGAGEPWFVAAKDLTKNELIVVQGHDH
                     PLLYTRSLVMNDLSFTLPERPKAGRYTCKTRYRMADAPCELCYLDDETAELVFDEPQW
                     AVTPGQSAVLYDVDICLGGGIIQTTDKPVIITR"
     gene            8003..9673
                     /locus_tag="ACFJAG_001680"
     CDS             8003..9673
                     /locus_tag="ACFJAG_001680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HFC3980923.1"
                     /translation="MEKIWLESYEKGVSAEIDITQYNSVSDVFRQSVEKFARLPAFQN
                     MGKTLTYAETGKLATDFASYLQNVLKLPRGERVAIMMPNVLQYPIALFGILQAGLVAV
                     NTNPLYTPRELEHQLKDSGATAIIVLENFANTLELVLPRTQIKHVIVASVGEMFGLLK
                     GSLINFIIRKIKKMVPEYRIRETVSFQTALKEGAKHVFQPVALNREDTALLQYTGGTT
                     GVARGAVLSHGNICANMLQAKEWIKNQLREGKETVIAALPLYHIFALTVNLMIFANAG
                     SKIVLIANPRDMKGFIGELKKQRVNVFIGVNTLFNAMVNRPDFAEVDFSGLRLTLGGG
                     MATQKAVAEKWKKITGTPIVEAYGLTEASPGVCCNPLNIESYSGSIGLPVPSTEVELR
                     DANGKEVPVGQPGELWVKGPQVMQGYWNRPEETAKAIDACGFLETGDIAVMDEKGRLK
                     LVDRKKDLVVVSGFNVYPNEIEEFIAHHEKVMEVACIGVPNEKTGEALKVFVVKKDPS
                     LTKEELTAFCRTGLTAYKVPKDIEFRDELPKSNVGKILRRELRQSAGK"
     gene            9785..11419
                     /locus_tag="ACFJAG_001681"
     CDS             9785..11419
                     /locus_tag="ACFJAG_001681"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006241 - CTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HFC3980924.1"
                     /translation="MTKFIFVTGGVVSSLGKGIAAASIAAILESRGLNVTMLKLDPYI
                     NVDPGTMSPFQHGEVFVTDDGAETDLDLGHYERFIDSTMTRRNSFSTGQVYENVIAKE
                     RRGDYLGGTVQVIPHITDEIKRRIHEGAAGYDVAIVEIGGTVGDIESLPFLEAIRQMR
                     SQLGRNNTLFAHLSYVPYIAAAGEIKTKPTQHTVKEMLSIGLQPDILICRMDRKMPAD
                     ERRKIALFCNVEERAIVGSYDVDSIYECPEMLHDQGIDNIITEQLQLNVQQADLTAWK
                     KIVHAVKNPKHTVKIAMVGKYVDLTESYKSLIEALKHAGIHTETDVQITFVDSESIEK
                     NKGDVSVLKDMDAILVPGGFGSRGVEGKIAAVRYARENNVPYLGICLGMQIALIEYAR
                     DVAGLKGANSTEFDLKCAAPVVALIDEWQTADGSVETRDESADLGGTMRLGAQEVELK
                     AGSLAVKIYGSGHIRERHRHRYEVNNNYVSALEQAGLVIGGVSAGRERLVETIELPNH
                     PWFFACQFHPEFTSNPRKGHPLFTAFVKAALNNKKA"
BASE COUNT         2815 a         3136 c         3086 g         2483 t
ORIGIN      
        1 gcttcgtcgc cttgtactga tttaaattta atccactata ctttaatttc tcctacacga
       61 tttgaaacac agccgtctta aaacatctta aaaaatttga aagcgtaaaa atacggaaaa
      121 catcatgaac tttgaaaacg acgacattat ccatgcgccg accacgtctt ccctgattct
      181 cgaagagcgg cacgattcgg agctgttccg tgtttacgcc ctgattttgg acggcattac
      241 cgatcaggtg ctgctgcccg gcaaaaagct gaccgaatcc gaactttgcc gtcagatggt
      301 gtgttcgcgc aacaccgtcc gcggcgcgct gtcgcttttg gcgcacgaca agattgtcga
      361 tttgcaaccc aacaggggcg cgttcgtcca cgttcccgat ttgaaagaaa tgcaggatgt
      421 gttcaatgcg cgcatcgaaa tggagacgat gattttgaac atcctcgccg gcctgccgga
      481 tttggaaacg cgcctcaagc cgctttatgc gatgataagg tgcgaagaag aggcctccgg
      541 caggggcgac cgcgtcggct ggaaccgcct gtccaatgcc ttccacgtcg aactggcgcg
      601 cctggtgggc aacgatgtgc tgttcgacat tatgaacacg ctgtgcgcgc ggtcttccct
      661 gattgtcgcc gtggcgggcg tgcatcgcga gaaaaaacac gccatcaata cgcatacgca
      721 ttccgaacac cgcgaaatcc tcgacctgct gctggcgggc aggcgcaacc gcgtggtcaa
      781 aatcctgcgc cgccatttgg gcaactgtat ggagcgtttg gaaaagactt tggaagattg
      841 aatgccggag cggataagcc gcctgaacct tcaggcggtt ttttaatggc gaacctgatg
      901 ccgtctgaaa tatggatgcg ggtatctgca attttcagac ggcaattttt aagccgcaca
      961 tatcatgcgg caataaagga gggtagggga tgagcagcct gatgacgttg ttttcggtat
     1021 tggtaccgat gtttgccgga ttttttatcc gtgttcccaa gccttacctg cccgcttcgg
     1081 acaaggtgct gtcggttttg gtgtatgccg tgctgctgct gatcggcgta tcgttgtcgc
     1141 gcgtggagga tttgggttcg cggttgggcg atatggcgtt gacggttctg tggctgtttg
     1201 tttgtacggt aggggcgaac ctgcttgcct tggcagtgtt gggaaagttg tccccgtggc
     1261 ggataggggg aaaagggaag ggcgtttcgg tcggcgtgtc gggcagtgtg aggcagctcg
     1321 gatgcgtact gatcggtttt gtgtccggca aattgatgtg cgatatttgg atgccgtctg
     1381 aaaacgcggg tatgtactgc ctgatgctgc tggtgttcct catcggcgta cagctcaaaa
     1441 gtagcggcgt atcgttgcgg caggttttgc ttaaccggcg gggcatccgg ctgtcggttt
     1501 ggtttatatt gtcatctctt tcaggcgggc tgctgtttgc cgcatcggca gatggtgtgt
     1561 cgtggacgaa aggtttggcg atggcttccg gcttcggttg gtattccctc tcgggtttgg
     1621 taatgaccga ggcttacggg gcggtatggg gcagcatcat gctgctgaac gatttggcac
     1681 gagagctgtt tgcactggca tttattccgc tgctgatgaa gcgttttccg gatgcggcgg
     1741 tgggggtcgg cggcgcgacc agtatggatt tcacattgcc cgtaattcag ggtgcgggcg
     1801 gtttggaagt cgtgccggta gcggtcagct tcggcgtggt ggtcaatatc gccgccccgt
     1861 ttctgatggt ggtgttttcc acgctgggct gaacgcggta aaatcggcat cccgatgcaa
     1921 ggaagcagaa aacgatgaaa ccgaaaatcc aaaggcatgg agagatttta agccttgtcc
     1981 gccggcatca gtttatgtcg gtggacgagc ttgccgccgc attggacgtt accccgcaga
     2041 cgatacgttg cgacatccgc gagttggagg agggcggcag cctgaaacgc catcacggcg
     2101 gcgcatcttc gggcggaaac ttgccggagg gtctgcccgc cgaccgccaa acccggtgtc
     2161 aaaacgaaaa aaacgccatt gcccggctga ttgcggaaca catccccgac ggttcgtcgc
     2221 tgttcgtcag tatcggtacg accatggaag ccgcggcatc agagctggtg aagcggcgca
     2281 gcagcctgcg gattattacc aacaatatcc acgtcgcctc cgtcgtttcg gcacgtacgg
     2341 attacacggt catcatcaca tccggcgtcg tccgcccttt ggacggcggt attaccggcg
     2401 tggcgaccgt cgactttatc aaccagttca aagtcgatta tgccgtgatg agcacgcacg
     2461 gcgtggaaag cgacggttcg cttttggatt acgattacaa ggaagtcagc gtcatgcagg
     2521 cgatgattgc caacgcgcgc gtccgttttc tcggcgtgga tcacagcaaa ttccgcagca
     2581 acgcgctggt caggctcggc ggcattaccg gcgtttgaca aagtatttac cgacaggttg
     2641 cctgataccg cgatgcagaa gatgctgaaa gaggcggggg tggaatgcct gattgccgat
     2701 gccgtctgaa cgctatgtca aagcgcgcaa gtcgggtaca ataaacacat catcaaaccg
     2761 cttcagacgg catacggaac ctccccaatg ccgtctgaag ccatctgttt aaagaaaacc
     2821 atgctcaata aagaccaatt cgcggacaac catttcatcc gcaccatcat cgaagacgac
     2881 ctcaaaagcg gcaaacacga agccgtccaa acccgttttc cgcccgaacc caacggctat
     2941 ttgcatatcg gacacgccaa atccatctgc ctgaacttcg gtttggcgta tatttacgac
     3001 ggtttgtgca acctgcgttt cgacgacacc aacccggaaa aagaaaacga cgaatacgtc
     3061 aacgccatca aagaagacgt cgagtggctc ggtttccatt gggcgggcga accgcgtttc
     3121 gcttccgact atttcgaccg gctttatgac tacgccgtcg gtttaatcaa agacggcaaa
     3181 gcgtatgtcg atgatttgac gcccgaagaa atgcgagaat accgcggtac gctgaccgaa
     3241 gcgggtaaaa acagccctta ccgcgaccgc agtatcgaag aaaacctcga cctgttcacg
     3301 cgtatgaaaa acggcgagtt ccccgacggc agcaaaaccc tgcgcctgaa aatcgacatg
     3361 gcggcaggca acatcaatat gcgcgatccc gtcatctacc gcatccgccg cgcccatcac
     3421 cacaacaccg gtgacaaatg gtgcatctac ccgatgtacg attacacgca ttgcatttcc
     3481 gatgccatcg aaggcatcac gcattccttg tgcacgctcg aatttgaagc gcaccgtccg
     3541 ctttacgact gggtgttgga caacatcccc gcgccgcacg ccacccgtcc gcgccaatac
     3601 gagttttccc gtttggagct tttgtacacc attacctcca aacggaaatt gaatcagttg
     3661 gttgtggaaa aacacgtttc cggctgggat gatccgcgta tgccgaccat ttccggtatg
     3721 cgccgccgcg gctacacgcc cgaaggggtg cgcctgtttg ccaaacgcgc cggtatttcc
     3781 aaatctgaaa acatcgtcga catgagcgtg ttggagggtg cgattcgcga agagctggaa
     3841 aactccgccc cgcgcctgat ggcggttttg aacccgctca aagtgaccct gaccaacttt
     3901 caagccggca aaacccaaag ccgccgtgcc gcgttccatc cgaaccacga agaaatgggc
     3961 gatcgcgaag tacctgtttc acaaaccatc tacatcgaag ccgacgactt tgccgaaaat
     4021 ccgcccaaag gcttcaagcg tctgattccc ggcggcgaag tacgcttgcg ccacggctat
     4081 gtcatcaagt gcggtgaagt cgtcaaagac gaagcaggca atgtggttga actcaaatgc
     4141 agcatcgacc acgacacctt gggcaaaaat ccagaaggcc gcaaagttaa aggcgtgatt
     4201 cactgggttt ccgccgaaca cgccgccgaa atcaaagtcc gtctgtacga ccgcctcttt
     4261 accgtcgagc gtcccggtgc cgtgcgcggc gaagacggcg aatacctgcc gtttaccgat
     4321 ttcctcaatc cggaatccgt taaggaaatc actgcttacg ccgaacctgc cgcgaaagat
     4381 ttgccggcgg aaagccgttg gcagttcgag cgcatcggct attttgtgac cgaccgccaa
     4441 gaccacggca aagacacgcc ggtgtttaac cgcacggtga cgttgaaaga ttcttggcag
     4501 cctaagtaaa ccccatcctt gccgtctgaa tattgttcgg gcggcatttc tcctttaccc
     4561 gcgaaatgcg gcacattcgg cacaccggaa aggaaatatg atgaaagtcc tctttatcgc
     4621 cgacccgatg gcaagtttca aaacctacaa agacaccacc tacgcgatga tgcgggaaat
     4681 ggcaaaacgc ggctggcggc tgtttcatac cttgagcggg gaattgtctg taaacggcgg
     4741 tttggtaacg gcacaggcat cggcatttga attttcgggt gcaaaaaacg atgatgacca
     4801 tgaatggttt aaagcggcgg acaaagttca gacggcatta aaagaatttg atgccgtgat
     4861 tatgcgtacc gatccgccgt tcgatatgca atacctttac tccacccaat tactgacgct
     4921 ggcggaacag cagggcgcga aagtgttcaa cagcggacgg gcgatgcgcg actttaacga
     4981 aaaactggcg attttgaatt tcagccgctt taccgcgccc acgctggtaa cgacccgttc
     5041 cgccgatgtc cgcgcatttt tgaaagaaca cggcgacatc atcgtcaaac cgctcgacgg
     5101 catgggcggc atgggcatct tccgcctgac cgaaaaagac cccaacatcg gcagcatcct
     5161 cgaaaccctg atgcggtttg attcccgcac cattatggcg caacgctaca ttcccgaaat
     5221 cgtacacggt gacaaacgca tcttgattat cggcggcaaa gtcgtcccct atgctttggc
     5281 gcgtatcccg caaaacggcg aaacacgcgg caatctggcg gcaggcgggc gcggtgtggc
     5341 gcaggaattg gacggacgcg accgggaaat tgcagagact ctggctcccg agcttaaacg
     5401 gagcggcatc ctgctggccg gtttggacgt tatcggcagc aacctgaccg aagtcaacgt
     5461 aaccagcccg accggattcc aagaaattat gaaacaaaaa agtttcgacg tggcggcaat
     5521 gtttgccgat gccgttgccg cgtggtcggt acgttaaacc gatgccgtct gaaaggcttt
     5581 tgcttcgtaa ccgcttggtt tgttcgggca ggcagggttt tccctcggcc ggcagggatg
     5641 cgcttaatgc cgtacggaca cccctccgcc ccgttttcag acggcatata ttgaggacat
     5701 tttgaaagga taccgatgga accttcctcc tacgcggcag aaaaaaaagg caaaagcggc
     5761 atcaggcgcg tcatcaacgc attcggctat tcgatagacg gcatcgccgc cgcctaccgt
     5821 tacgaagcgg cattccgtca ggttttgtgg ctgaacgcgc tgctggtgtg cgcggcattt
     5881 ttttgggttt ccgaaaccgc cgtccgcctg ccgttgatta tcgcgtcttt tgtgtcggtc
     5941 attgtcgaac tgttcaacac cgccgtcgaa gccgccgtcg atcatacttc gaccgaaaaa
     6001 cacgagctgg ccaaacgcgc caaagatgca ggttctgccg cacaactggt tgccatgctg
     6061 atgttggcgg cggtttggct gtccgccctg ttcgggtaaa acgcttgcag caggatttgt
     6121 aatcctttag gattagtatt tattattcac ttaatctaca tcaaatttcc gagcagtatt
     6181 tgtatgtaag attaagcaca ttccccgtct gatattaaag gagcaggaag atgaaaaaat
     6241 tattggcagc cgtgatgatg gcaggtttgg caggcgcggt ttccgccgcc ggagtccatg
     6301 tcgaggacgg ctgggcgcgc accactgtcg aaggtatgaa aatgggcggc gcgttcatga
     6361 aaatccacaa cgacgaagcc aaacaagact ttttgctcgg cggaagcagc cccgttgccg
     6421 accgcgtcga agtgcatacc cacatcaacg acaacggcgt gatgcgtatg cgcgaagtca
     6481 aaggcggcgt gcctttggag gcgaaatccg ttaccgaact caaacccggc agctatcacg
     6541 tgatgtttat gggtttgaaa aaacaactga aagagggcga caagattccc gttaccctga
     6601 aatttaaaaa cgccaaagcg caaaccgtcc aactggaagt caaaaccgcg ccgatgccgg
     6661 caatgaacca cggtcatcac cacggcgaag cgcatcagca ctaatctgct ggaaatattt
     6721 gaaatgccgt ctgaaaaagc ccgggctttc agacggcatt tttatgcccg cctttaaaat
     6781 gtgttaaaat ccgcctttaa aaaccgccgt ttccaagcca tcctgcgtat gaatacgaca
     6841 tcaaacactt ccaatatcat cgtcgggctt tccggcggtg tcgattcttc cgtaaccgcc
     6901 gccctgctca agcagcaggg ttatcaagtg cgcggtgtgt tcatgcagaa ctgggaaaac
     6961 gacgacaacg acgaatattg cagcatcaaa caggattcgt tcgatgccat cgccgttgcc
     7021 gatattgtcg gcatcgacat cgacatcgtt aatttcgccg cgcaatataa agacaaagtt
     7081 tttgcttatt ttcttcagga atacagtgcg gggcgcacgc cgaatccgga tgtgttgtgc
     7141 aatgccgaaa tcaaattcaa atgctttttg gactacgccg tagggcaggg cgcggatacc
     7201 attgccaccg gacactatgc gcgcaaagaa gtccgcaacg gcgtgcatta cctgctcaaa
     7261 ggtttggatc gaaacaaaga ccaaagctat tttctctacc gcctcaagcc tttccaactc
     7321 gaacgcgcga tttttccgtt gggcggtttg gaaaaacccg aagtgcgccg ccttgccgcc
     7381 gaatttaatt tgccgactgc cgctaaaaaa gacagtaccg gcatctgttt catcggcgag
     7441 cgtccgttcc gcgagtttct gcagaaatac ttgccgaccg acaacggcaa aatggtgacg
     7501 cccgaaggga aaaccatcgg cgaacacgtc gggctgatgt tttacacatt gggtcagcgc
     7561 aaaggattgg gcatcggcgg cgcgggcgaa ccgtggtttg ttgcggctaa agatttgacg
     7621 aaaaacgaac tcatcgtcgt acaaggacac gaccatccgc tgctctatac ccgcagcctt
     7681 gtgatgaacg atttgagttt cacgctgccc gaacgtccga aggcaggacg ctatacctgc
     7741 aaaacgcgtt accgtatggc ggacgcgcct tgcgaattgt gctatttgga tgatgaaacc
     7801 gccgagctgg tgtttgacga accgcaatgg gcggttacgc cgggtcagtc cgccgtgctg
     7861 tacgacgtcg acatctgttt gggcggcggc atcatccaaa cgaccgacaa acccgtcatc
     7921 atcacgcgat aaaggtaatg ccgtctgaaa cggttttcag acggcattgt tccgctcaat
     7981 tccactttaa agaccgatac ctatggaaaa aatctggtta gaaagctacg agaagggcgt
     8041 cagtgccgaa atcgacatca cgcaatacaa ttccgtcagc gacgtattcc gccaaagcgt
     8101 ggaaaaattt gcccgtctgc ccgcttttca aaatatgggc aaaacgctca cttatgccga
     8161 aaccggcaaa ctggcgaccg atttcgcctc ttatctgcaa aacgtcctca agctgccgcg
     8221 cggcgaacgt gttgccatta tgatgccgaa cgtattgcaa tatccgattg cccttttcgg
     8281 tattttgcag gcaggtttgg tggcggtgaa caccaatccg ctctatacgc cgcgcgagtt
     8341 ggagcatcag ctgaaagaca gcggtgcgac cgccatcatc gttttggaaa atttcgccaa
     8401 cacgctggag ctggtgctgc cgcgcacgca gatcaaacac gtcatcgtcg cctccgtcgg
     8461 cgaaatgttc gggctgctta aaggttcgct gatcaatttc atcatccgaa aaatcaagaa
     8521 aatggttccc gaataccgta ttcgggaaac cgtttccttt cagacggcat tgaaagaggg
     8581 ggcgaagcac gttttccaac ctgtcgcatt aaaccgcgaa gataccgcat tgttgcaata
     8641 cacgggcggc acgacaggcg ttgccagagg cgcggtgctg agccacggca acatctgcgc
     8701 caatatgctt caggcaaaag aatggattaa aaaccaattg cgcgagggaa aagaaaccgt
     8761 tatcgccgcc ctgccgctgt accacatctt cgccctgaca gtgaatctga tgatttttgc
     8821 caatgccggc tcgaaaattg tcctgattgc caacccgcgc gatatgaaag gctttatcgg
     8881 cgaactgaaa aagcagcggg ttaacgtatt tatcggcgtg aacacgctgt ttaacgcgat
     8941 ggtcaaccgg cccgatttcg ccgaagtcga tttttcagga ttgcggctga ctttgggcgg
     9001 cggtatggcg acccaaaaag ccgttgccga aaaatggaaa aaaatcaccg gcacgcccat
     9061 cgtcgaagcc tacggtttga ccgaagccag ccccggcgtg tgctgcaacc ccttaaacat
     9121 cgaatcatac agcggcagca tcggtttgcc cgtcccgtcc accgaagtcg aactgcgcga
     9181 cgcaaacggc aaagaagtcc ccgttgggca gccgggcgaa ttgtgggtaa aaggcccgca
     9241 agtgatgcaa ggctactgga accgccccga agaaaccgcc aaagccatag acgcgtgcgg
     9301 ctttttggaa accggcgata ttgccgtgat ggacgaaaaa ggccgtctga agctggtcga
     9361 tcgcaaaaaa gacctcgtcg tcgtttccgg attcaatgtt tatccgaacg aaatcgagga
     9421 attcatcgcg caccacgaaa aagttatgga agttgcgtgt atcggcgttc cgaacgaaaa
     9481 aaccggcgag gcactcaaag tgttcgtcgt caaaaaagac ccgtctttga ccaaagaaga
     9541 actcaccgct ttctgccgta ccggtctgac cgcatacaaa gtgccgaaag acatcgaatt
     9601 ccgcgacgag ttgcccaagt ccaatgtcgg caaaatcctg cgccgcgagt tgcgccaaag
     9661 tgccgggaaa taaagaaaag ataccgtctg aaaacagccg tccaccgttc agacggcatc
     9721 cgtccgtttg ccagaaccgc gcgcttcacg ttaaaatcac gcattccaac atgggtattc
     9781 catcatgacc aaattcattt tcgtaaccgg cggcgttgtc tcctcactgg gtaaaggtat
     9841 cgccgccgct tctattgccg ccatcctcga atcgcgcggc ttgaacgtta ccatgctcaa
     9901 gcttgatcct tatatcaacg tcgatcccgg cacgatgagc ccgttccaac acggcgaagt
     9961 gttcgtaacc gacgacggcg cggaaaccga cctcgacttg ggacactacg aacgtttcat
    10021 cgattccacg atgacccgcc gcaacagctt cagcacgggt caggtgtacg aaaacgttat
    10081 cgccaaagaa cgccgcggcg actatctcgg cggtacggtt caagtcatcc cgcacattac
    10141 cgacgaaatc aaacgacgca tccacgaagg cgcggcgggt tacgatgtgg cgattgtcga
    10201 aatcggcggt acggtcggcg acatcgaatc gctgccgttt ttggaagcca tccgccagat
    10261 gcgaagccag ttgggacgca acaacaccct gttcgcccac ttgagctacg ttccctacat
    10321 cgccgccgca ggcgaaatca aaaccaagcc gacccagcac accgtgaaag aaatgttgag
    10381 catcggcttg caacccgaca tcctgatttg ccgtatggac aggaaaatgc cggcagacga
    10441 acgccgcaaa atcgccttgt tctgcaacgt ggaagagcgc gcgattgtcg gcagctacga
    10501 tgtggacagc atctacgaat gccccgaaat gctgcacgac caaggcatcg acaacatcat
    10561 taccgagcag ttgcagctta acgtgcagca ggcggatttg accgcgtgga aaaaaatcgt
    10621 ccacgccgtc aaaaacccga aacacaccgt caaaatcgcg atggtcggca aatacgttga
    10681 tttgaccgaa tcctacaaat cattgattga agccttgaaa cacgcgggca tccataccga
    10741 aaccgatgtg cagattacct tcgttgacag cgaaagcatc gagaaaaaca agggcgacgt
    10801 ttccgtactc aaagatatgg atgccatcct cgttcccggc ggcttcggtt cgcgcggcgt
    10861 ggaaggcaaa atcgccgccg tgcgctacgc ccgtgaaaac aacgtgccat acttgggcat
    10921 ctgcctcggt atgcagattg cgctgattga atacgcccgc gacgtggcag gtttgaaagg
    10981 tgcgaattcc actgagtttg acttgaaatg cgctgccccc gtcgtcgccc tgattgacga
    11041 atggcaaacc gccgacggca gcgtcgaaac ccgtgacgaa tccgccgatt tgggcggcac
    11101 gatgcgtttg ggcgcgcaag aagtcgaatt gaaagcaggc agcctcgccg tcaaaatcta
    11161 cggcagcgga cacattcgcg aacgccaccg ccaccgctac gaagtcaaca acaactacgt
    11221 ttccgcgctg gaacaggcag gtttggtcat cggcggcgta tccgccggac gcgaacgctt
    11281 ggtcgaaacc atcgaactgc cgaaccatcc ttggttcttc gcctgccagt tccatcccga
    11341 gttcacgtcc aacccgcgca aagggcatcc tttgttcacc gcgtttgtca aagccgcgtt
    11401 gaacaataaa aaagcctgat aaagcgttac ttgatgatca aaatgccgtc tgaaagcctg
    11461 acaaagactt tcagacggca ttttcgcaaa tcggggatca taaaagccat caatttaatt
//
LOCUS       DAXFZM010000075        11417 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.075, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000075 DAXFZM010000000
VERSION     DAXFZM010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11417)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11417)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11417
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.075"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            256..1560
                     /locus_tag="ACFJAG_001682"
     CDS             256..1560
                     /locus_tag="ACFJAG_001682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008519 - ammonium channel activity
                     [Evidence IEA];
                     GO_process: GO:0072488 - ammonium transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HFC3980925.1"
                     /translation="MKKHIWAASLLPASLSAEPLNWWKPYSAVNSGDTAWVMTAAALV
                     LLMTLPGLALFYGGMVRKKNLLSTMMHSFSIATLVGILWVAVGYSLAFTPGNAFIGGL
                     GRVFLSGMQIDAAARMLTVSPNAPTVPEPVFMFFQMTFAIISTAIITGAFAERMKYSA
                     MMLFSGIWFLLVYVPGAHWVWGGGFMSKGGVLDYAGGTVVHINAGIAGLVAALVLGRR
                     IGYGREAMPPHNMAMTLIGAAMLWFGWFGFNAGSALAADAAAGMAMAVTQVSAVFGAA
                     GWLACEKIAGHKPSALGLASGAVSGLVGITPAAGFTGPSGAAAIGILTAAACFVSVTV
                     VKHKLRYDDSLDAFGIHGFGGLVGGILTGIFFDNRIFGGDAAVWQQLWIQVKDGFIMA
                     AYSGLMSWAILKAVGKICGGLRVGKDVEREGLDLNIHGEHVE"
     gene            complement(1654..2949)
                     /locus_tag="ACFJAG_001683"
     CDS             complement(1654..2949)
                     /locus_tag="ACFJAG_001683"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HFC3980926.1"
                     /translation="MIRPDFQEYLPSYYFSSVNPHTVYPKLQCRLKAETCIIGGGLSG
                     LCTALPLAEHGHEAVVLEAARIGFGASGRSGGQVISDYACGMGEIEKQVGLEQAQWFW
                     QQSLQAVELVDERVRKHAIDCDWQRGYATVAVRPQHWEELQQWHEHAQRHYGASHYQL
                     WDKAELKQQLDSDMYQGAQFDPLSGHLHPLNYTLGVASAAAEAGAQIFEQSPMTRIEP
                     YQNGWLVYTPEGSVECKNVVYAVNTYVGLNPIFRPLERKAIAVSTFIIATEPLGARTK
                     GLIRNNMAVCDNRHILDYYRLSADGRLLFGGKDNEFIDNPARMTELVRQDMLKVFPQL
                     ADVRIEYSWGGECDITANLVPHFGRLTSNVFYTQGYSGHGMAITGIAGLAVAEAILGD
                     ECRLKPFEQLCQPNIILQPFLRKLGSFLGSKYYQWKDSR"
     gene            complement(3076..3963)
                     /locus_tag="ACFJAG_001684"
     CDS             complement(3076..3963)
                     /locus_tag="ACFJAG_001684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HFC3980927.1"
                     /translation="MQKSKLSWFLKLMLALSLAFLYIPLVVLVIYSFNESKLVTVWGG
                     FSTKWYGALLENDTILEAAWLSLRIAVVSSLAAVVLGTLAGYAMARIKRFRGSTLFAG
                     MISAPMVMPDVITGLSMLLLIIQVQIFLQGSEWLQHLYFDRGFFTIFLGHTTLCMAYI
                     TVVIRSRLVELDQSLEEAAMDLGARPLKIFFVITLPLIAPAIASGFLLGITLSLDDLV
                     ITSFLSGPGSSTLPQVIFSKIKLGLDPQMNVLATILIGIIGTLVIIVNYWMMRQATKR
                     NREAAEAYRQEKLAAEKAN"
     gene            complement(3963..4928)
                     /locus_tag="ACFJAG_001685"
     CDS             complement(3963..4928)
                     /locus_tag="ACFJAG_001685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HFC3980928.1"
                     /translation="MNLNKLKNKLFRRPGQRAVIAVPYIWLLVLFLIPFAIVLKISFA
                     EQEIAIPPFTPLTTIDEDLGRLNIAVSYQNYADIFQNFWHTLNPFGDSENSNIYLMTY
                     WSSIKTALTTTVICLLVGYPTAYAISRANPSVRNGLLLAIMLPFWTSFLLRVYAWMGL
                     LGHNGIINNLLIKMGIIREPLDLFYNAFSLNLVMVYAYLPFMILPLYTQLVKLDSRLL
                     EAASDLGAGPVKSFLTITLPLSKTGIIAGSMLVFVPAVGEFVIPELVGGSENLMIGKV
                     LWQAFFDQNNWPLASAVAVVMVALLVVPIALFQHYENRELEEGAK"
     gene            complement(4944..6068)
                     /gene="potA"
                     /locus_tag="ACFJAG_001686"
     CDS             complement(4944..6068)
                     /gene="potA"
                     /locus_tag="ACFJAG_001686"
                     /EC_number="7.6.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015417 - ABC-type polyamine transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015846 - polyamine transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter ATP-binding protein"
                     /protein_id="HFC3980929.1"
                     /translation="MTATTASSAKPYLQIQGLVKKFGDNYAVDNIDLDIYQNEIFALL
                     GSSGSGKSTLLRMLAGMESPNQGKIILDGQDITKLAPYDRPINMMFQSYALFPHMTVE
                     QNIAFGLKQDKMPKGEIDARVEEMLRLVQMTKFAKRKPHQLSGGQQQRIALARSLAKR
                     PKILLLDEPLGALDKKLRQQTQLELVNTLEQVGVTCIMVTHDQEEAMTMATRIAIMSD
                     GQLQQVGTPSDVYDYPNSRFTAEFIGETNIFDGVVIENHADYAVIECEGLENHVRIDH
                     GLGGPSEQDLWVSIRPEDIDLYKEKPEYLGDYNWAKGTVKEIAYLGSFAIYHIKLANG
                     RVVKSQVPAPYWYVRNITPPTWDETVYISWPENQPTPLFR"
     gene            complement(6346..6615)
                     /gene="rpsO"
                     /locus_tag="ACFJAG_001687"
     CDS             complement(6346..6615)
                     /gene="rpsO"
                     /locus_tag="ACFJAG_001687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019958878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HFC3980930.1"
                     /translation="MALTVEQKAQIVKDFQRKEGDTGSSEVQVALLTFRINDLTPHFK
                     ANPKDHHSRRGLLKMVSQRRRLLAYLRRTQPDTYRALITRLGLRK"
     gene            complement(6696..6830)
                     /locus_tag="ACFJAG_001688"
     CDS             complement(6696..6830)
                     /locus_tag="ACFJAG_001688"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980931.1"
                     /translation="MWSDVKCRLKPEDVSVFRRHFADIAKYRAEQQKLCDNALFLFQE
                     "
     gene            complement(6820..7755)
                     /gene="secF"
                     /locus_tag="ACFJAG_001689"
     CDS             complement(6820..7755)
                     /gene="secF"
                     /locus_tag="ACFJAG_001689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HFC3980932.1"
                     /translation="MELFKIKRDIPFMSYGKLTTFISLVTFIAAVFFLVARGLNFSVE
                     FTGGTVMEVQYQQGADVNKMRERLDTLKMGDVQVQALGTNKHIMIRLPNKEGVTSAQL
                     SNQVMDLLKKDSPDVTLRQVEFIGPQVGEELVNNGLMALGFVVIGIIIYLSMRFEWRF
                     AVSAIIANMHDIVIILGCFAFFQWEFSLTVLAGILAVLGYSVNESVVVFDRIRENFRK
                     PAMRGHTVPEVIDNAITATMSRTIITHGSTEAMVVSMLVFGGAALHGFSMALTIGIVF
                     GIYSSVLVASPLLLMFGLSRDNIAKEAKQKEEIVV"
     gene            complement(7759..9612)
                     /gene="secD"
                     /locus_tag="ACFJAG_001690"
     CDS             complement(7759..9612)
                     /gene="secD"
                     /locus_tag="ACFJAG_001690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HFC3980933.1"
                     /translation="MNRYPLWKYLLIVFTIAVAAVYSLPNLFGETPAVQVSTNRQAII
                     INEQTQSKVDAALKNAGIQTDGMFVVDNSLKVRFKDTETQLKARDVIENTLGEGYITA
                     LNLLADSPEWMAKIKANPMFLGLDLRGGVHFTMQVDMKAAMQKTFERYSGDIRRELRR
                     EKIRSGTVRQAENSLTVPLQDAGDVQKALPQLLKLFPEATLNSEGSNIVLALSEEAVN
                     KVRSDAVKQNITTLHNRVNELGVAEPIIQQSGLDRIVVQLPGVQDTAKAKDIIGRTAT
                     LEVRMVEDDPAKLREALEGNVPSGYELLSSGGEHPETLLISKQVELTGDNINDAQPSF
                     DQMGAPAVSLSLDSAGGSIFGELTAANVGKRMAMVLIDQGKSEVVTAPVIRTAITGGR
                     VEISGSMTTAEANDTSLLLRAGSLAAPMQIVEERTIGPSLGKENIEKGFHSTLWGFAI
                     VAAFMVVYYRLMGFFSTIALSANILFLIGILSAMQATLTLPGMAALALTLGMAIDSNV
                     LINERIREELRAGVPPQQAINLGFQHAWATIVDSNLTSLIAGIALLVFGSGPVRGFAV
                     VHCLGILTSMYSSVVVFRALVNLWYGRRRKLQNISIGAVWKPEAETAAGKE"
     gene            complement(9823..10089)
                     /gene="yajC"
                     /locus_tag="ACFJAG_001691"
     CDS             complement(9823..10089)
                     /gene="yajC"
                     /locus_tag="ACFJAG_001691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HFC3980934.1"
                     /translation="MNQAVAQFAPLVLIMVVFYFLIMRPQQKKFKAHQAMLAALKAGD
                     KVVLAAGFKGKVTRVGEQFFTVDIGQGTKIEVEVERNAIAAKVD"
     gene            10220..11338
                     /locus_tag="ACFJAG_001692"
     CDS             10220..11338
                     /locus_tag="ACFJAG_001692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone deacetylase family protein"
                     /protein_id="HFC3980935.1"
                     /translation="MPLTRLFLKLYALLRLFLGKNAQTAWIFHPSCTGHDPGANHPDS
                     PDRILCIEQALRRAGIWQHLQTVEAEEISDTRLALVRSSKYLNRLESCLPEDGKICRL
                     DDDTVISKNSLSAARFSAGSAVQAVDMVMKRKAWHAFCAARPPEHHAKSGKAGGFCLL
                     NNVAAGVMHAIAEYRLKRIAVIDFDVHYGDGTAEIFKDDPRILFFNLFETDLFPFPEN
                     NGMPDGGNMVHLPLPSGTGSRTFREAVRRQWLPRLAAFKPELVLLSAGFDAHRLDESG
                     RLNLHEADFAWLTHKIIQTASSCPGKIVSVLEGGYTLEPLAQSAAEHIRVLAGLGKSD
                     AATAYQKTLNPTKKRFAKPKTGQVRQPTQSDRYDINAV"
BASE COUNT         2814 a         3019 c         2934 g         2650 t
ORIGIN      
        1 ttttcctaca gtaaattgtt gacaatccat acgcccgcat atgcgccgcc taaggataaa
       61 tcctcccgcc ggacaacggg ggcaagggat gggatgcgat atttccatat tcaaacaagg
      121 gatttgtttc acgcacaggg cggcacatcg gcaaaatccc cgcgccggtc cggcagggct
      181 tgcgcccatc ccggacaagc cccgaccccg cctttccgaa agacgggccc aaccattaag
      241 gaaactttaa tcaaaatgaa aaaacacata tgggcggcat ctttgctgcc ggcatcccta
      301 tcggcagaac ctttaaactg gtggaaacct tattccgccg tcaattcggg cgataccgcc
      361 tgggtgatga ctgcggctgc cttggtactg ttgatgacgc ttcccgggct ggctttattc
      421 tacggcggta tggtgcggaa aaaaaacctg ctctcgacga tgatgcacag cttttccatc
      481 gcgacattgg tgggcatcct ttgggtcgcc gtcggctatt ctttggcgtt cacgccggga
      541 aatgccttta tcggcggttt ggggcgcgta tttttaagcg ggatgcagat agacgctgcc
      601 gcacggatgc tgaccgtgtc gcccaatgcg ccgactgttc ccgaaccggt atttatgttt
      661 tttcagatga cgtttgccat tatttcgact gccattatta ccggcgcgtt tgccgaacga
      721 atgaaatatt cggcaatgat gctgttttcg ggcatatggt ttttattggt ttatgtgccg
      781 ggcgcgcatt gggtgtgggg cggcggcttt atgagcaagg gcggcgtatt ggattatgcc
      841 ggcggtacgg tggtgcacat caatgccggt atcgcgggac tcgtcgccgc cttggttttg
      901 ggcaggcgca taggctacgg gcgcgaggcg atgcctccgc acaatatggc gatgacgctg
      961 attggcgcgg caatgttgtg gttcggctgg ttcggcttta acgctggttc ggcgcttgcg
     1021 gcagacgcgg cggcggggat ggcgatggcg gtaacgcagg tgtcggccgt attcggcgcg
     1081 gcaggctggc ttgcctgcga gaaaatagcg ggacacaaac cttctgcttt ggggctggct
     1141 tccggcgcag tttccgggct ggtcggcatc acccctgccg ccggctttac cggtccgtcg
     1201 ggcgcggccg ccatcggtat attgactgcc gccgcgtgct ttgtgtccgt caccgtcgtc
     1261 aaacacaaat tgcgttacga tgattctttg gacgctttcg gcatacacgg attcggcggg
     1321 ctggtaggcg gaatattgac cggcatcttt ttcgacaacc gcattttcgg tggggatgcg
     1381 gcagtttggc agcagttgtg gatacaggta aaagacgggt tcattatggc ggcatacagc
     1441 gggctgatga gttgggcgat tttgaaggct gtggggaaaa tctgcggcgg tctgcgcgtc
     1501 ggcaaggatg tcgaacgcga aggtttggat ctgaatatcc acggcgaaca cgtggaataa
     1561 ggacggctat gccgtctgaa gcctgaaaat cgggtttcag acggcatttt tcacgtttgc
     1621 cgccgatggg gataaacata ctgcctgcga cgcttaacgg ctgtctttcc actgataata
     1681 tttcgagccg aggaaagaac cgagtttgcg caaaaacggt tgcaggataa tattcggctg
     1741 gcacaactgt tcaaacggtt tcagacggca ttcgtcccct aaaattgctt cggcaaccgc
     1801 caggcctgca atgcccgtta tcgccatccc gtgcccggaa taaccttgcg tataaaaaac
     1861 attcgaggtc aaacgtccga aatgcgggac aaggttggcg gtaatatcgc actccccgcc
     1921 ccacgaatat tcgattctaa catcggcaag ctgcggaaaa actttaagca tatcttggcg
     1981 gacaagctcg gtcatacgcg caggattgtc gataaattcg ttatccttac cgccgaaaag
     2041 cagcctgccg tccgcgctga ggcggtaata atccaaaata tggcggttgt cgcatactgc
     2101 catattgttg cggataagcc cttttgtgcg cgcgcccaag ggttcggtgg caataataaa
     2161 ggtgctgacg gcaatcgcct tgcgttccaa aggccggaat atcgggttca aaccgacata
     2221 agtattgacg gcatagacca catttttaca ctcgacgctg ccttcgggcg tgtaaaccag
     2281 ccaaccgttt tgatacggtt cgatgcgcgt catcggggat tgctcgaaaa tctgcgcgcc
     2341 ggcttcggca gcggcgctgg caacacccaa cgtgtaattg agcggatgaa gatgcccgga
     2401 caagggatcg aactgtgcgc cttggtacat atcgctgtca agctgctgtt tcaactcggc
     2461 tttatcccaa agttgataat gactcgcacc gtaatgccgt tgggcgtgtt catgccactg
     2521 ctgcaactct tcccaatgct gcggacggac ggcaaccgtg gcataaccgc gctgccaatc
     2581 gcaatcgatg gcatgtttgc ggacgcgttc gtccaccagt tcgaccgcct gcaaagactg
     2641 ttgccaaaac cattgcgcct gctccaagcc gacctgtttt tcaatttccc ccataccgca
     2701 ggcgtagtcg ctgataacct gcccgccact cctgccggac gcgccgaagc cgatacgtgc
     2761 ggcttccaaa acgacggctt catgtccgtg ttccgccagc ggcaatgcgg tacacaaacc
     2821 gctcaaaccg ccgccgataa tgcaggtttc ggctttcaga cggcattgga gtttcggata
     2881 aacagtatgc ggattaaccg aactaaaata ataagaaggc agatattctt gaaaatcagg
     2941 gcgaatcatt gtgtttgctt tatcgggtat attttcggac ggaatgatac aggctgtcgg
     3001 gccatatcgt ccaaacagaa aatcggttga aaaaaaacag gctgacccag tcatgcggtc
     3061 agcctgcctt attaattaat ttgctttctc ggcagccaat ttttcttggc ggtaggcttc
     3121 tgccgcttct cggttgcgct tggttgcctg cctcatcatc caataattga cgatgatgac
     3181 caatgttccg atgatgccga tcaggatggt tgccaagaca ttcatctgag gatcgagacc
     3241 caacttgatc ttggagaaaa taacctgcgg caatgtggat gaaccggggc cggagaggaa
     3301 tgaggtaatt accaaatcat ccaaagacaa ggtaatgccg agtaggaagc ctgaagcaat
     3361 ggcaggggca atcaaaggca aagtgatgac aaaaaagatt ttcagcggac gcgcgcccaa
     3421 gtccattgcg gcttcttcga gcgactggtc aagctcgacc agccgcgaac ggatgacaac
     3481 ggtaatgtat gccatgcaca gcgtcgtatg tccgaggaag atggtgaaaa agccgcgatc
     3541 gaagtagaga tgttgcaacc attcgctgcc ctgcaaaaat atctgcacct gaataatcag
     3601 cagcagcata gacagaccgg taatcacgtc gggcatgacc atgggcgcgg aaatcatacc
     3661 ggcaaacagc gtgctgccgc gaaagcgttt gatacgcgcc atcgcatagc ccgccagcgt
     3721 gcccaaaacg acggcggcaa gcgaagacac aacggcaatc cgcagcgaca gccaagcggc
     3781 ttccaaaatg gtgtcgtttt ccagcaatgc gccgtaccac ttggtcgaaa agccgcccca
     3841 aacggtaaca agtttggatt cgttgaacga atagatgacc aaaacaacca gcgggatata
     3901 cagaaacgcc agcgatagtg ccaacatcag tttcaagaac caagataatt tggatttctg
     3961 cattatttgg ctccttcttc caattcgcgg ttttcatagt gctggaacag ggcaatcggt
     4021 acaaccagta gcgcgaccat cacgacggcg acggcagaag ccaacggcca gttgttttga
     4081 tcaaagaatg cctgccacaa tactttaccg atcatcaggt tttccgaacc gccgaccagc
     4141 tcgggaatga cgaactcacc gacagcgggg acgaaaacca gcatcgaacc tgcaataatg
     4201 ccggttttcg acaaaggcag ggtaatcgtc aagaacgatt tgaccggtcc cgcgcccaag
     4261 tcggaagccg cttcgagcag gcggctgtcc agtttcacca gctgcgtgta aagcggcaga
     4321 atcataaacg gcagataggc ataaaccatt accaaattta acgaaaacgc attatagaac
     4381 aaatctaatg gttctctgat aatacccatc ttaatcaata agttgtttat gatgccgtta
     4441 tgcccgagca aacccatcca cgcatagaca cgcagcagga acgatgtcca aaaaggtaac
     4501 atgatggcaa gcagcaaacc attgcggacg gaaggattgg cacgggaaat cgcataggcg
     4561 gtcgggtaac cgaccaacag gcaaatcacc gtcgtcgtca gcgcagtctt aattgaagac
     4621 caataagtca tcagatagat attactgttt tcactgtcgc cgaaggggtt aagggtatgc
     4681 caaaaatttt ggaaaatatc ggcatagttt tgatagctga cggcgatgtt caggcgaccc
     4741 aagtcctcat ctatcgtcgt taaaggagta aacggtggaa tggcgatttc ttgttcggca
     4801 aagctgattt tcagcacgat ggcgaacgga atcagaaaca gcaccaaaag ccaaatatac
     4861 ggtacggcaa tcaccgcacg ctgccccgga cggcggaaca gtttgttttt cagtttatta
     4921 aggttcatct cactcccctt aaatcaacgg aacaacggag tcggttggtt ttccggccag
     4981 ctgatataga cggtttcatc ccaagtcggc ggcgtgatgt tacgcacata ccagtaaggt
     5041 gcaggaactt ggcttttgac gacgcgcccg ttggcgagtt tgatatggta tatggcgaag
     5101 ctgcccaaat aggcaatttc ttttaccgtg cctttcgccc agttgtagtc gcccaaatat
     5161 tcgggttttt ctttatataa atcaatatcc tctggtcgaa tactaaccca aagatcctgc
     5221 tcgctcgggc cacccaaacc atggtcgata cggacgtggt tttccaaacc ttcgcattcg
     5281 ataacggcat agtcggcatg attttcaatc accacaccgt caaagatgtt ggtttcgccg
     5341 ataaactcgg cagtgaagcg gctgttggga tagtcgtaca cgtcgctggg cgtgccgacc
     5401 tgctgcaact gaccgtcgga cataatggcg atgcgggtcg ccatcgtcat cgcctcttct
     5461 tggtcgtgcg taaccataat gcaggttacg ccgacttgtt ccagcgtatt gaccaactcg
     5521 agctgggttt gctggcgcaa tttcttatcc aacgccccca aaggttcgtc aagcaacagg
     5581 attttcggac gttttgccaa actgcgcgcc aaggcgatac gttgctgctg accaccggac
     5641 aattggtgcg gtttgcgttt ggcaaatttg gtcatctgaa ccagacgcag catttcttcg
     5701 acgcgcgcat cgatttcgcc tttaggcatt ttgtcctgtt tcagaccgaa ggcaatgttt
     5761 tgctccaccg tcatatgcgg aaaaagcgcg taactttgga acatcatatt gatggggcgg
     5821 tcatagggtg caagtttggt aatatcttga ccatcaagga tgatttttcc ctgattggga
     5881 ctttccatac ccgccagcat acgcagcagc gtagattttc cgctgccgga actgcccaaa
     5941 agggcgaaga tttcgttttg ataaatgtcc aagtcgatgt tatcgacagc gtaattgtca
     6001 ccaaactttt tcaccaaacc ttggatttgc agataaggtt tggctgaaga cgctgtggtt
     6061 gcggtcataa tggcaatact ccaataaaaa gacgagtacc ggcaaaacgg attttcgaat
     6121 gggtgataaa aagctgtttg attgctggcg ggagtcgcaa cgtctgatgc cgtctgaaac
     6181 tcttgtgaag cgcacgggca gcatgaaata aaaaggggtt ctaaagaacc ccgcattata
     6241 ttagtttata aggtttttag ggtaataaat atgggtttga gcttgtcgga aagcaacaga
     6301 aaagaaaaca ccgcccattt ttctgggcgg tgtcggaaag cgcaattatt tacgcagacc
     6361 caagcgggta atcaacgcgc gatacgtatc gggctgggta cggcgcaaat aggccaacag
     6421 gcggcggcgt tggctgacca ttttcaacag gccgcgacgg ctgtggtggt ctttggggtt
     6481 ggctttgaag tggggggtca gatcgttgat gcggaaagtc aacagggcaa cttgtacttc
     6541 agaagagccg gtgtcgcctt ctttacgttg gaaatcttta acgatttgtg ctttttgttc
     6601 tacggtcagt gccataatgg aaaaactccg aaaaataaaa agaaccccaa atgggattcg
     6661 gacaagtttg ccaagcctcg acaacggcaa actccctatt cctgaaacag gaacagcgca
     6721 ttatcacaca atttttgctg ttctgcacga tattttgcga tgtcggcgaa atgccgtctg
     6781 aaaacggaga catcttccgg tttcagacgg catttgacat cagaccacaa tttcttcctt
     6841 ctgtttcgct tccttggcga tattgtcgcg gctcaaaccg aacatcagca agagcgggct
     6901 ggcaaccaat acggaagagt agatgccgaa cacgataccg atggtcagtg ccatagaaaa
     6961 gccgtgcaag gctgcaccgc cgaacaccag catagaaaca accatcgcct cggtcgaacc
     7021 gtgggtaatg atggtgcggc tcatcgttgc ggtaatcgcg ttgtcaatga cttccggcac
     7081 ggtatgtccg cgcatcgccg gcttgcggaa attttcacgg atacggtcga agacgacgac
     7141 ggattcgttc acagaatagc ccaatacggc aaggatacct gccaagacgg tcagcgaaaa
     7201 ttcccattgg aagaaggcaa agcagccgag aataatcacg atgtcgtgca tattggcgat
     7261 aatggcagat acggcaaaac gccattcgaa acgcatcgac aggtaaataa tgatgccgat
     7321 aacgacaaaa cctaaagcca tcaatccatt atttaccaat tcctcaccga cttgcgggcc
     7381 gataaattcg acttggcgca aagtaacgtc gggactgtct tttttcagca aatccataac
     7441 ctgattggac aactgtgcgg aagtaacacc ttctttgttc ggcaggcgga tcatgatgtg
     7501 tttgttcgta cccaatgcct gaacctgtac atcacccatt ttcagcgtat cgaggcgttc
     7561 gcgcatctta ttgacatccg caccctgctg atattggact tccattaccg taccgccggt
     7621 aaattcgaca gagaaattca ggcctctggc aaccaaaaag aatacggcgg caataaaggt
     7681 aaccaacgaa atgaaggttg tcagtttgcc gtagctcata aacggaatat cgcgtttgat
     7741 tttaaagagt tccatagctt actccttacc tgccgcagtt tcggcttcag gtttccatac
     7801 cgcaccgatg gaaatattct gcaatttgcg gcggcggccg taccacagat tgaccaacgc
     7861 acggaatacg acgacggacg aatacatcga agtcagaata cccaagcagt gtacgacggc
     7921 aaaacctctt accggtccgg aaccgaatac caaaagcgcg ataccggcaa tcagcgaagt
     7981 caggttcgaa tcaacaatgg tcgcccatgc gtgttggaaa ccgagattga ttgcctgctg
     8041 cggcggcacg ccggcacgca attcctctcg gatacgttcg ttaatcaaga cgttggagtc
     8101 gattgccata cccaaagtca acgccagcgc ggccataccc ggtaacgtca acgttgcctg
     8161 catggcagac aaaataccga ttaggaacag tatgttggca ctcaatgcaa tagtagaaaa
     8221 gaaacccatc aggcggtaat aaaccaccat gaatgcagca acgatggcaa aaccccataa
     8281 agtcgaatgg aagccttttt cgatgttctc cttacccaaa gacggaccga tggtacgttc
     8341 ttcgacaatc tgcatcggtg cggcaagaga accggcacgc aacagcaaag acgtatcgtt
     8401 ggcttcggct gtcgtcatgc ttccggaaat ttccacgcgt ccgccggtaa tggcagtacg
     8461 gataaccggt gcggttacaa cctcggattt tccttggtcg atcaaaacca tcgccatgcg
     8521 tttgccgaca tttgcggcag tcagttcgcc gaaaatgctg ccgcccgcgc tgtccaagct
     8581 cagactgacg gcaggtgcgc ccatttggtc gaaactcggt tgcgcatcgt tgatgttgtc
     8641 gccggtcagc tcgacctgtt tgctgatcag cagagtttcg ggatgctccc cgccgcttga
     8701 aagcagctca taaccgctcg gcacgttgcc ttccaatgcc tcgcgcaact tggcaggatc
     8761 gtcctccacc atgcggactt ccaaagtcgc ggtacggccg atgatgtctt ttgccttggc
     8821 agtatcttgc acgccgggaa gctgtacgac aatgcggtcc aaacctgact gttggataat
     8881 cggctctgcc acacccaatt cgtttacacg gttatgcagt gtagtgatgt tttgcttcac
     8941 cgcatctgat cgtactttat tcaccgcctc ttccgaaagc gccaatacaa tattgctgcc
     9001 ttctgaattt aacgttgcct caggaaacag cttgagtaac tgaggcagtg ccttttgcac
     9061 atcgccggca tcctgcaaag ggacggtcag gctgttttca gcctgacgca ccgtgccgct
     9121 gcggattttt tcacggcgca gttcgcggcg gatgtcgccc gaataacgct caaacgtttt
     9181 ctgcatcgcg gctttcatat cgacctgcat ggtgaaatgc acgccgccgc gcaggtccaa
     9241 acccaaaaac atcggattgg ctttgatttt cgccatccat tcggggctgt ccgccaacag
     9301 gttgagcgcg gtaatatacc cttcgcccaa agtgttttcg ataacgtcgc gcgctttaag
     9361 ctgcgtttct gtgtctttga aacgcacttt cagtgaatta tccacaacaa acatcccgtc
     9421 ggtctgaatg cccgcgtttt tcagcgcagc atccactttg gattgagtct gttcgttgat
     9481 gatgatggct tgtcggttgg tcgatacctg cacggcgggc gtttcgccga ataggttggg
     9541 cagcgaatac actgcggcaa ccgcaatcgt gaacacaatc agcagatatt tccataaagg
     9601 ataacggttc atcattgttc cttaatggtt ggaaccccac cctttcggtg gtgtcggaat
     9661 cgggctattt cagaagaggc aaaacccctc cctgccaggc aagaccgaaa ggcagcatct
     9721 tgaatatgcc gccctgcgtg tcggaacatg gtcaagcctt cggttggaat tcaaaacaaa
     9781 gtgccgcatt cgggctttcc cgatgcggct tgtcggcaca aatcaatcga cttttgcggc
     9841 aatcgcattg cgttccactt cgacctcgat ttttgtaccc tgtccgatat ccacggtaaa
     9901 aaactgttcg ccgactctgg ttaccttacc cttgaaacct gccgccaaga ccactttgtc
     9961 gccggctttc aaggcggcaa gcattgcctg atgcgctttg aatttctttt gttgggggcg
    10021 catgatcagg aagtagaaca ccaccataat caacaccaaa ggagcaaatt gtgcaacagc
    10081 ttgattcata atttatccgt tctttctaaa tatgattgaa aatcgagcgg ggtatataat
    10141 agcataagac cgtaaacaat atatcgggtt tgccgcccat acccaaccgt atgccgtctg
    10201 cacccccttt cccgaaccca tgccgctgac ccgcctgttc ctgaaactct acgccctgtt
    10261 gcgccttttt ttgggcaaaa acgcccagac cgcctggatt ttccacccct cctgcaccgg
    10321 gcacgacccc ggggcaaacc atcccgattc gcccgaccgc atcctctgca tcgagcaggc
    10381 attgcgccgc gccggtattt ggcagcacct ccaaaccgta gaggcggaag aaatcagcga
    10441 tacgcgcctt gcacttgtcc gctcgagcaa atatctgaac cgtttggaat cttgcctacc
    10501 cgaagacggc aagatttgcc gtttggacga cgacaccgtt atcagcaaaa actccctgtc
    10561 cgccgcccgt ttttccgccg gttcggcagt tcaggcagtc gatatggtca tgaaacgcaa
    10621 agcgtggcac gccttttgcg ccgcccgccc gccggagcat cacgcgaaaa gcggcaaagc
    10681 cggcggattc tgcctgctga acaacgttgc cgccggcgtc atgcatgcca ttgccgaata
    10741 ccgcctgaaa cgcattgccg tcatcgattt cgatgtccac tacggcgacg gtacggcaga
    10801 aatattcaaa gacgatccgc gtatcctgtt tttcaacctg tttgaaaccg accttttccc
    10861 cttccccgaa aacaacggta tgcccgacgg cggcaatatg gtgcacctgc ccttgccgtc
    10921 gggaacgggc agccgcacat tccgcgaagc cgtccgcaga cagtggctgc cccggcttgc
    10981 cgcattcaaa cccgaactgg tgctgctgtc ggcaggattc gacgcacacc gtctggacga
    11041 atcgggcagg ctcaacctgc acgaggcgga ttttgcctgg ctgacacaca aaatcattca
    11101 gacggcatcc agctgccccg gcaaaatcgt atccgtactc gaaggcggct acacccttga
    11161 acctctggca caatctgctg ccgagcatat ccgcgtactg gcggggctgg gcaaatccga
    11221 tgccgcaacc gcctatcaga aaacactgaa cccaacaaaa aaacggtttg ccaaaccgaa
    11281 aaccggacag gtgcgccaac ctacccaatc cgaccgttac gatataaatg ccgtctgaag
    11341 ccgattcggt tttcagacgg catcattatt tgacctgacg caaacagaaa gccttccgcg
    11401 tgcttaaaca catctct
//
LOCUS       DAXFZM010000076        11401 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.076, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000076 DAXFZM010000000
VERSION     DAXFZM010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11401)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11401)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11401
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.076"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..185
                     /locus_tag="ACFJAG_001693"
     CDS             <1..185
                     /locus_tag="ACFJAG_001693"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980936.1"
                     /translation="PSRKLGGFFMPSETIFRRHFSLILLGEWLTLNVSTFIIQFIGAS
                     GADTGRAPPKRGLYRE"
     gene            340..507
                     /locus_tag="ACFJAG_001694"
     CDS             340..507
                     /locus_tag="ACFJAG_001694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980937.1"
                     /translation="MVNEKLAENRKRYEQKRVIKKVSFNAETEKELLEYAQNLDFSQW
                     VKSIIKEKIKK"
     gene            667..1518
                     /locus_tag="ACFJAG_001695"
     CDS             667..1518
                     /locus_tag="ACFJAG_001695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bro-N domain-containing protein"
                     /protein_id="HFC3980938.1"
                     /translation="MNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYTNPRRTV
                     DLHCKSRGVTKRYTPTASGEQEMTYINEPNLYRLIIKSRKPAAEAFEEWVMETVLPAI
                     RKTGGCQVGPKTTADDRTGLRRAVAALAGRKGIDYSSAYSMVHQRFNVESIEDLPAGK
                     LPEAVAYVHALTLHTGLTGEVLDREPLPAPQPALPISGNALADIAAMVYYGTRMIESG
                     KDVSAPLKQLGCRQAVTMWTVWHETRSILKRSAAALEVLRGYADKDASDRIAACLEGI
                     YSKATVR"
     gene            complement(1555..1716)
                     /locus_tag="ACFJAG_001696"
     CDS             complement(1555..1716)
                     /locus_tag="ACFJAG_001696"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980939.1"
                     /translation="MDLTMSAEEFCRKQIAYWLNESRKASDNADLKAFEFAGREPADY
                     REMLKRYAA"
     gene            complement(1707..2381)
                     /locus_tag="ACFJAG_001697"
     CDS             complement(1707..2381)
                     /locus_tag="ACFJAG_001697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980940.1"
                     /translation="MNLKALIARFRVLANDKAEPYFWSDEEVSGWLNDAVHEACLRGR
                     LLHSDDAFVTDVEKGRPLYAYAAGGFAAGYAYEIDSIRFVSDGKPVCLKLVSPEAADV
                     CAPGWRDGAQTGLPVYAVQGDGKLTLVPAPDRDGRLFAGGYCLPRDMAGDGDEPEINS
                     IHHRNLVYWALAEAFSIPDAETFDPQRSESARRRFELYFGLPADSDLRRITREDAPHL
                     NRHFWI"
     gene            complement(2378..2863)
                     /locus_tag="ACFJAG_001698"
     CDS             complement(2378..2863)
                     /locus_tag="ACFJAG_001698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980941.1"
                     /translation="MKRRPGICLCGVAVFDNAVRTAAGGWMDKVFIKYIGGRAVWRDR
                     IYHTGLVFEDGQVREVSAGAAAKLLRHGDVFAAVPGKRVEKADDTEALEKAGASELER
                     ETAAFDAVQDVILQINRMGKDELELYAKANYGQGLDKRKSAENLRGDVVRMVRQFGIA
                     Q"
     gene            complement(2869..3342)
                     /locus_tag="ACFJAG_001699"
     CDS             complement(2869..3342)
                     /locus_tag="ACFJAG_001699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980942.1"
                     /translation="MAEIYVKNNGGNRFGGVPYGNLAAEHYRIVAKQDGAILGADASE
                     PPKAGDVLALGVLEQGFRLDDAQIIVKTAMSSGITADVGFAYADGADDAKVPQDAAYF
                     ASGADFASAGRIRCQSAKLVTLPKQALLTVTLKGAENKKAADIDILIYGEKFGQL"
     gene            complement(3397..4689)
                     /locus_tag="ACFJAG_001700"
     CDS             complement(3397..4689)
                     /locus_tag="ACFJAG_001700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4043 family protein"
                     /protein_id="HFC3980943.1"
                     /translation="MAQKTNTAYGDPQAMMKQAAGLFAMHMQRNSTLNRLAGKMPAGT
                     AGAEATLRKQTTQHMPVVRCQDLTRGMGDEIRFNLVNPVSALPIMGDNTAEGRGVGMS
                     LSEAGLRVNQARFPVGGGTMTNQRSPADYRALIRPAAQSLMDRYADQTLLVHMAGARG
                     FHDNIEWGVPLAGDPKFNDYAVNPVKAPSKNRHFTASGDAVTGVGDNGGELKIASTDL
                     FTMDTVDSMRTVLDQIPLPPPIVKFEGDKAAGDSPLRVWLLSPAQYNRFAADPKFRQL
                     QASAIARASQANQNPLFLGDAGLWNGFILVKMPRPIRFYAGDEMKYCADKFSEAESGL
                     KIPASFADKFAVDRSVILGGQAVLEAFANTGKHGGMPFFWSEKELDHGNRVETLVGTI
                     RGVAKTRFAVDVGGGAKEITDYGVTVVDTVVPLHGGIR"
     gene            complement(5315..>11401)
                     /locus_tag="ACFJAG_001701"
     CDS             complement(5315..>11401)
                     /locus_tag="ACFJAG_001701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLxRFG domain-containing protein"
                     /protein_id="HFC3980944.1"
                     /translation="DRTKQEEAGRFFSGPADGNTPRAEELARGTEKQPDVSGIPSEDG
                     AEFLDTGVMPDGLARQYADMAAEYRAKPSEAMGINPDDGAVSAAAALAADSGAAVPSA
                     VSDDMEARSVADDVPSGRSADADRGGVPSAYGNVRPGGAPRGAASVAPGGSAAAASGG
                     IARVSPLPAGQYFDGLDTRGRKALAKEAGLDIKGVADFGQIAAPVRRKIEQAYHARIE
                     ADYQAASEAKQGYLPPPVRMADAVPVPKKGFSVPADALDKESRRRFDALPEWVRRHAQ
                     TVADYTADGIMRREAGMADMRGHYPEGLAESAGAVRAYRAQHPESADVLDRLNRAVYG
                     YRRNNGWSVPLLSREGERLQGVRTALPDDGASEAVVGGGRGLTRALPTEDKGLAQDVR
                     QDVRQGLTQGGRGLTPDAGADANAAALQGLPGSAVASGNAPARRQNLQVRARAEGAAP
                     GLSASENLAGTDGGKRAPVAGKRPDTVLPVLNPQVAESAGRVSPKKRMADAAADFTRR
                     LAADRRRPEKAGVPLGGGEYRFEHTDRRHIDALAGVPGRPGKGGMPEEFADMAGPSNS
                     DGLVSDGRRYLKGREAETLRAGGLSEAVPSEPGRDYRPTQEARAPAKVMARPRDAASA
                     GKPAGRAQPARAKDAPVAGKAAAAKNAATEKPSSDKVRNIEAGKSHFDGGKGKSAAAQ
                     GAATEKPSSDKAAEPETFAKTALDNPEEARRKARVLQGGPVYTVKGRQAPQGFKALRE
                     HAENIKKRLAESIGGLAERVDVAAVSETAPDKAQMLLSQRVEGWFDGRTGKITLVAEN
                     LTPERAVWAAWHELGHRGFAADGFAKYRAQLERADGNGLIRRIADAVQEGREGTGDAA
                     ASVRPAAVEEAVAELYAAQRTGGWAGIENRYGVKVGNGLKRGIAGVLARIGALLRRVL
                     QRLAGKAGGAMSDADVFAMLADLHGNVEGARDAPWGGNHRAVMFARAEDGAAERSKSE
                     SLEKLRRAETIRISGREVPEGGNLREYKRNALEYGKSLRGPYVNKDTGREISLGRSGI
                     TEILRHDYKDAEHLQSIAAIPQIIENAVYIDTLPNEDLAKNGDIQGYEYYVSGLNVGG
                     ADYTVRAAVAVSRNGNRYYDHKLTKIEKGNLLSLLDRVSTTGASESKSPLSGIDDKRL
                     LQILQDKDAGKGGIADFDTEAVRFSRAANIGAAIGHITGKKSDLRNALKDRWDASKGI
                     QLQFLGRRQIEDIYGGVLDGLKEYGRLSELFGADANKAVTEADKVVREWGRLKEEDAK
                     ALADLMHDATLAKVDADPLMRKDARGRLDGIRTALDIADGKIAKAEAAVASAGARIAR
                     ADAAVRKAQRAADKAAYALEKAQEKHGREILADEADMRLRRLFYADSEAKRALRRAGA
                     DAAAESRAKTDAVRMSEQARADVKRLEKDEVGAQKALEGLALLNRRFAGLPDAAQRVY
                     RKARDDYRAHFGQVRDALAERLARAGQDAETVRRLKERFDNELGGVYFPLARFGDYLV
                     VVKDADGNSANVSRAETLSEAEKLRDALKADFGAGFKVSPVMKSRDYIRSRDAVGSGF
                     MKELGEAVGRMDLDPAQRARLNDTLTQLYLNSLPDTSWAKHGIHRKGVPGFSDDARRA
                     YAQNMGSGANYLAKLRYADRMAEQLDVMQDFVDGRKYEEGFDQRQLQRVADEMRKRHE
                     AVMNPNPSKLAQALTGFGFLWMMGMSPASAVVNLSQTAMVAYPVMAAKWGYAGAAREL
                     LRASKQIGLRFGEKFNTIEDSLNEDEKAAFRKAADYGVIDLSQAHDLAGVANGDPGLA
                     GSAWQKVMDKAAWLFHHAEKFNRQVTFVAAYRLAKRAGADSEAAFEQAKKATYDWHFD
                     YAAQNRPRFMMGNAAKVVFLFKQYSQNILYALGRNAYLAFKGDKEARKTLAGLLVSHA
                     MASGILGLPFVSTLLAVASMLGSDDDDPWDAEAALRNMLADAFGDKAGEVLAKGFSRL
                     TPLDVSGRLGLNQLVFPDIQDGLEGKKWAESLVVGSTGAVVGAGIGAADGVRTRSSVP
                     RTANTLSLMKSW"
BASE COUNT         2418 a         4050 c         2703 g         2230 t
ORIGIN      
        1 cgccaagccg caaacttggc ggcttcttta tgccgtctga aaccatcttc agacggcatt
       61 tttctttgat tttgttgggg gaatggttga ctttgaacgt gtccacgttt ataattcaat
      121 tcatcggcgc atcgggtgcc gatacgggaa gagccccacc gaagcggggc ttgtacaggg
      181 agtaggaaaa tgaagctcat ccttcaaatt ctcatcctgg ttttaatctt gatgctggca
      241 ggcgatacgc ctattagcgg ataaaaccgg ctggggcggt agccgccgcc ccagtcccta
      301 tcttacaaaa ggcagttcaa aaaatcaagg agtttgccta tggttaatga aaaactggca
      361 gaaaaccgaa agcgttacga gcaaaaacga gtcattaaaa aagtctcgtt taatgcggaa
      421 acagaaaaag agcttttgga atatgcccaa aatctcgatt tttcccaatg ggttaaatca
      481 atcataaaag aaaaaatcaa aaagtaattg actttgaacg tgtccacgtt tattattctt
      541 acaacggcac agccgttaat ggaaaaccga accaagcggg aacttggttc ggttaagtga
      601 aaagcagttc taggaaaact cttttcgcgt cttttaaata acctctaaaa gaaagactat
      661 tctatcatga atgctgtcca agttttaaac tttcaacaaa actccgtccg tactgttgcc
      721 gataacaaag gcgagttgtg gtttttggca aacgatgttt gcgagatttt aggctacacc
      781 aaccctcgcc gaacggttga cctgcactgc aaaagcaggg gcgtaacaaa acggtacacc
      841 cccaccgcca gcggcgaaca ggagatgacc tatattaacg agccgaatct ctaccgcttg
      901 attatcaaat cccgcaagcc tgccgcagaa gcgtttgaag aatgggtaat ggaaaccgtc
      961 ctgcccgcca tccgcaaaac aggcggctgc caagtcggac caaaaaccac cgccgacgac
     1021 cgtaccggat tgcgccgggc cgttgccgcg cttgccgggc gcaaaggcat agactactcc
     1081 tccgcgtaca gtatggtaca tcaacgcttc aacgtcgaat ccatcgaaga cctccctgcc
     1141 gggaagctgc ccgaagccgt cgcctacgtc cacgcattga cactgcacac gggcttgacg
     1201 ggcgaagtcc ttgaccgcga accgttaccc gcgccgcaac ccgccctgcc cataagcggc
     1261 aacgctttgg ccgacattgc cgctatggtt tattacggca cacggatgat tgaatcgggc
     1321 aaagacgttt ccgcaccgct gaagcagctc ggctgcaggc aggcggttac gatgtggacg
     1381 gtttggcacg aaacccgttc aatcctgaaa agatccgccg cggccctcga agtgttgcgg
     1441 ggatatgcgg acaaagacgc ctccgaccgc atagccgcat gtcttgaagg catttacagc
     1501 aaggctacgg taaggtaaac ggaaaatgcc gcccgaatct tcggacggca tttttcacgc
     1561 ggcatagcgt ttcaacattt cccgataatc cgccggttcc cgtccggcga actcaaaggc
     1621 cttcaaatcg gcgttatctg atgccttgcg gctctcgttc agccaatagg cgatctgttt
     1681 cctgcaaaac tcttcagcac tcatcgtcaa atccaaaaat gcctgttcag gtgcggcgca
     1741 tcctcacgcg tgatacggcg caaatcactg tcggccggca ggccgaaata cagctcgaaa
     1801 cgcctccttg ccgattccga acgctgcggg tcgaaagtct ccgcatccgg gatactgaaa
     1861 gcctccgcca aagcccaata aaccaaattc cgatgatgta tggaattgat ttccggctcg
     1921 tccccgtccc ccgccatatc ccgcggcagg caataccccc cggcaaacaa cctgccgtca
     1981 cggtccggcg caggcacaag cgtcagcttc ccgtcgccct gcaccgcata aaccggcagc
     2041 cccgtttgcg ccccgtcgcg ccaacccggg gcgcaaacat ccgccgcctc cggcgaaacc
     2101 aacttcaggc acaccggctt gccgtcggac acaaaacgga tactgtcgat ttcatacgca
     2161 taacccgccg caaacccccc tgccgcataa gcataaagcg gccgcccttt ttccacatcc
     2221 gttacaaacg catcgtccga atgcagcagc cggccgcgca ggcacgcctc gtgaaccgca
     2281 tcgttcaacc atcccgacac ctcttcgtcg ctccaaaaat acggctcggc cttatcattg
     2341 gcaagcacgc ggaaacgcgc aatcaaagcc ttcaaattca ttgcgcgata ccgaactgac
     2401 gaaccatccg aaccacgtcc ccgcgcaaat tctccgccga tttgcgctta tccaaaccct
     2461 ggccgtaatt cgccttcgca tacagttcaa gctcgtcctt gcccatccgg ttgatttgca
     2521 ggatcacatc ctgcaccgcg tcaaacgccg ccgtttcccg ttcgagttcc gaagcgcccg
     2581 ccttttccaa agcctccgta tcatccgcct tttccacgcg tttgcccggg acggcggcaa
     2641 acacatcgcc gtggcgcaac aactttgccg cagccccggc cgacacctcg cgcacctggc
     2701 cgtcttcgaa aaccaagccc gtatgataga tacggtcgcg ccacacggca cgcccgccga
     2761 tatacttgat aaaaacctta tccatccaac cccccgccgc cgtccggacg gcattgtcaa
     2821 atacagcaac gccgcaaagg caaatccccg ggcggcgttt cattccgctt acaactggcc
     2881 gaacttctcg ccgtaaatca aaatatcgat atcggcggcc ttcttatttt ccgccccttt
     2941 aagcgtaacc gtcagcaaag cctgcttggg cagcgtaacc agtttggcag actggcagcg
     3001 gatacgcccg gcagacgcaa agtccgcgcc cgaagcaaaa taagccgcat cctgaggcac
     3061 tttcgcatca tccgcaccgt ccgcatacgc aaagccgaca tcggcagtga taccggaaga
     3121 catcgccgtc ttcacaataa tctgcgcgtc atccaaacgg aaaccctgtt ccaagacacc
     3181 cagcgccaac acatcgcccg ccttaggcgg ctcagaagca tccgccccca agatcgcacc
     3241 gtcctgcttc gcaacgatac ggtaatgctc cgccgccaga ttgccgtaag gcacgccgcc
     3301 gaaacggttg ccgccattgt ttttcacata aatctcagcc ataaaaaacc tcaacccaac
     3361 aaataggaaa agccgccctt tcaagcggca ttcgaatcag cggataccgc cgtgcaaagg
     3421 aaccaccgta tccacaaccg tgacaccgta gtcggtaatt tccttcgcgc ccccgccgac
     3481 atccacggca aagcgcgttt tcgccacacc gcgtatcgta ccgacgagcg tttccacacg
     3541 gttgccgtgg tcaagctcct tctcagacca aaagaaaggc ataccgccgt gtttgccggt
     3601 attcgcaaac gcctccaaca ccgcctggcc gcccaaaata accgaacggt cgaccgcaaa
     3661 cttgtccgca aacgaagccg ggattttcaa gcccgattcc gcctcgctga acttatcggc
     3721 gcaatacttc atctcatcgc ccgcatagaa acggatgggg cgcggcattt tcaccaggat
     3781 aaagccgttc cacaaacccg catcgcccaa aaacagcgga ttttgatttg cctgggaggc
     3841 gcgcgcgatt gccgaagcct gaagctggcg gaatttcgga tcggcggcaa aacggttgta
     3901 ctgcgccggg gaaagcagcc acacgcgcaa aggcgaatca cccgccgcct tgtcgccctc
     3961 aaacttcaca atcggcggcg gcagcggaat ctggtcgagc acggtacgca tactgtccac
     4021 cgtatccatc gtaaacaaat cggtagaggc aatcttcaac tcgccgccgt tgtccccaac
     4081 gcccgttacc gcatcgcccg aagccgtaaa atggcggttt ttggacgggg ctttgaccgg
     4141 attgaccgca taatcattga atttcgggtc gcccgccaaa ggcacgcccc attcgatatt
     4201 gtcatgaaaa ccgcgcgcgc ccgccatatg caccaacagc gtctggtcgg cataacggtc
     4261 catcaggctt tgcgccgccg gacgaatcag cgcgcgataa tcggcagggc tgcgctgatt
     4321 cgtcatcgtg ccgccgccaa cggggaaacg cgcctgattc acacgcaaac ccgcctccga
     4381 caggctcatc cccacgcccc tgccttccgc cgtgttgtcg cccataatcg gcagggcgga
     4441 aacagggttg accaaattga aacggatttc gtcacccatg ccgcgcgtca aatcctgaca
     4501 gcgcacgacc ggcatatgct gggtcgtctg tttgcgcaaa gtcgcctccg cacccgcggt
     4561 accggcaggc atcttgcccg ccaaacggtt cagcgtactg ttgcgctgca tatgcatcgc
     4621 aaacagcccc gccgcctgct tcatcatcgc ctgcgggtcg ccgtaggccg tattcgtctt
     4681 ttgtgccata aagagcctcc ctcaaaaact caagaattta aaaacttctc aacctgctct
     4741 tccgtcatgg aagccagttt ttccgccagc gcgttgccgc tcaaataatc cggcgggccg
     4801 tccgaagccg tatggtcgcg ccccgccgga atatccgaca gcgtattggg cgtattcttc
     4861 ccggcaggcg gcttttcggc gggcttttcc ggttcggcgg cggattttgc cgccttaaac
     4921 atatcgaacg ccccgatgac ctcggcggca gtcccgtcct taagcgcgtc attaaacgcc
     4981 ttgcggacaa gcgggttctg cccggccagc cactcctcca gctcgcggct ttccacaatc
     5041 gaatccgcat cggggtgcgc cgtatagatt tcgcggtaat gcgcctttgc cgcctcctgc
     5101 cgcttcatgt ccgcctcata acccgccagc ttctcctgaa tcagcttttc cacgcccttt
     5161 ttcacatcct cgtcggaaaa atccccgaac aacgaattat cggaaccgtc agccgtttcc
     5221 actccgggtt tttccgcccc cttctcaagc tcctcgatgc gctccctcaa ggcttgggct
     5281 tcggctttcg ccgacttttc cgcctcgcgc gcctctacca gcttttcata agggatagtg
     5341 tgtttgccgt ccttggcacg gatgaccttg tccgcacgcc gtccgccgca ccgatacccg
     5401 cgccgaccac cgcgcccgta ctgccgacca ccagcgattc cgcccacttc ttaccctcca
     5461 aaccgtcttg gatatcgggg aaaaccaact ggttcaagcc caaacgcccc gacacgtcca
     5521 gcggcgtcag gcggctgaag cccttggcca acacctcgcc cgccttatcc ccgaaagcat
     5581 ccgccaacat attgcgcaac gccgcttccg catcccacgg gtcatcgtcg tcactgccca
     5641 acatcgaagc caccgcaagc agcgtcgaca caaacggcag ccccaagatg cccgaagcca
     5701 tcgcatgcga gaccaacagc cccgccagcg tcttacgcgc ctccttatcc cccttaaacg
     5761 caaggtacgc attgcgcccc agcgcataca ggatattctg cgaatactgc ttgaacagaa
     5821 agaccacctt cgccgcattg cccatcataa agcgcggacg gttttgcgcc gcatagtcaa
     5881 aatgccagtc gtacgtcgcc tttttcgcct gttcgaaagc cgcctcgctg tccgcccccg
     5941 cccgtttcgc caaacggtag gccgcgacaa acgtaacctg gcggttaaac ttctccgcat
     6001 gatggaacag ccaggccgcc ttatccatca ccttctgcca agccgacccc gccaatcccg
     6061 ggtctccgtt cgccaccccc gccaaatcat gcgcctgcga caaatcgatc acaccgtaat
     6121 ccgccgcctt tcggaacgcc gccttctcat cctcgttcag actgtcctca atcgtattga
     6181 acttctcccc gaacctcagc ccgatctgtt ttgaagcccg cagcaattcc cgcgccgcac
     6241 cggcataacc ccacttcgcc gccatcaccg gataagccac cattgccgtc tgcgacaggt
     6301 tcacaaccgc agaagcgggc gacatcccca tcatccacaa aaagccgaag cccgtcaaag
     6361 cctgcgccag cttggaagga ttcggattca tcaccgcctc gtggcgtttc ctcatctcat
     6421 ccgccacacg ctgcaactga cgctggtcga aaccctcctc atatttgcgc ccgtccacaa
     6481 aatcctgcat cacatccaac tgttccgcca tacggtccgc atagcgcaac ttcgccagat
     6541 aattcgcacc gctgcccata ttctgcgcat atgcgcgcct cgcatcatcg ctgaagcccg
     6601 gcacgccctt gcggtggatg ccgtgtttcg cccaagacgt atcgggcagg gagttcaaat
     6661 aaagctgcgt cagcgtatcg ttcaatcggg cccgttgcgc cggatccaaa tccatcctgc
     6721 cgacagcctc gcccagctcc ttcataaatc cgctgccgac cgcatcgcgg cttcggatat
     6781 aatcccggga cttcatcacg ggcgaaacct taaaccccgc cccgaaatca gccttcagcg
     6841 catcgcgcag cttctccgcc tcgctcaaag tttccgcgcg ggacacattc gcactattcc
     6901 cgtccgcatc cttgaccacc accagataat cgccgaaacg cgccaaaggg aaatacacac
     6961 cgcccagctc gttgtcaaaa cgctccttca ggcggcgcac cgtttccgca tcctgccccg
     7021 cacgcgccaa ccgttcggca agcgcatcgc gcacctgccc gaaatgcgcc ctataatcat
     7081 cccgcgcctt gcggtacacc ctctgcgccg catcaggcag cccggcaaaa cggcggttca
     7141 gcaaagcaag cccctccaaa gccttttgcg ccccaacctc atccttttcc aaacgcttca
     7201 catccgcgcg cgcctgctcc gacatccgta ccgcatccgt tttagcccgg ctttccgccg
     7261 ccgcatccgc cccggcgcgc ctcaacgccc gcttcgcctc cgaatccgca taaaacagac
     7321 ggcgcaggcg catatccgcc tcatccgcca aaatttcccg accgtgtttt tcctgcgcct
     7381 tctccagcgc ataagccgcc ttatccgccg cccgttgcgc tttccgtacc gcggcatccg
     7441 cacgcgcaat acgcgcaccg gcggaagcaa cggccgcctc cgccttcgcg attttaccgt
     7501 ccgcaatatc caaagccgtc cggatgccgt ccaaacgccc ccgggcatcc tttcgcatca
     7561 gcgggtcggc atccaccttc gccagcgtcg catcgtgcat cagatccgca agcgctttcg
     7621 catcctcctc cttcaacctg ccccattccc tgacaacctt gtccgcctcc gtaaccgcct
     7681 tgttcgcatc cgcgccgaag agttccgaca aacgcccgta ttccttcagg ccgtccaaaa
     7741 cgccgccgta aatgtcctcg atctgccgcc tgcccaaaaa ctggagctga atccccttgg
     7801 aagcatccca gcggtctttc agcgcgtttc tcaaatcgga ttttttaccc gttatatgac
     7861 cgattgcggc cccgatgttc gccgcacggg aaaaacgcac cgcctccgtg tcaaaatcgg
     7921 caatgccgcc cttgcccgca tctttgtctt gcaaaatctg caacaggcgt ttatcatcaa
     7981 tgcccgataa aggcgatttg ctttcagagg ctcccgtagt tgatacgcgg tcaagtaatg
     8041 aaagcaagtt gcctttttct attttcgtca gcttatggtc gtaatagcgg ttaccgttcc
     8101 tgctaaccgc gacggcagcc cttaccgtgt aatccgcacc gccgacattc agtcccgaaa
     8161 cataatattc ataaccctga atatcgccgt tcttagccaa atcctcgttc ggcagcgtat
     8221 cgatatacac cgcattctca ataatctgcg gaattgccgc gatactctgc aaatgttccg
     8281 cgtccttata gtcgtgacgc aatatttcag tgatgcccga acgtcccaaa ctgatttcac
     8341 gccccgtgtc cttattcaca taaggcccgc gcaaagattt gccgtattcc agcgcattgc
     8401 gcttatattc gcgcaaattg ccgccttccg gaacctccct gcccgagata cggatggttt
     8461 ccgcacggcg cagcttctca aggctttccg acttggaacg ttccgccgca ccgtcttcgg
     8521 cccgcgcgaa catcactgca cgatgattgc cgccccaagg cgcatcccgc gccccttcca
     8581 cattcccgtg caaatccgcc agcatcgcaa acacatccgc gtccgacatc gcaccgccgg
     8641 ccttgcccgc caggcgttgc agcacacggc gcaacagggc gccgatacgc gccaacacgc
     8701 ccgcaatgcc gcgtttcaaa ccgttgccga ccttcacgcc gtaacggttt tcaatgcccg
     8761 cccaaccgcc ggtacgctgc gccgcataaa gctccgcgac cgcctcttcc accgcggcgg
     8821 ggcgcaccga ggccgccgca tcgcccgtgc cttcgcgccc ttcctgcacc gcgtccgcaa
     8881 tgcgccgtat caggccgttg ccgtccgcac gttccaattg cgcacggtac ttggcgaaac
     8941 catccgccgc aaagcccctg tgccccagct cgtgccacgc cgcccatacc gcacgttcgg
     9001 gcgtaaggtt ttccgccacc agcgtgattt tgcccgtcct gccgtcaaac cagccctcca
     9061 cacgctgcga caacagcatc tgcgccttgt ccggcgccgt ttcggacacg gcggcgacat
     9121 ccacccgttc cgccagtccg cctatgcttt cggcaaggcg ttttttgata ttttcggcgt
     9181 gctcgcgcaa tgccttaaaa ccttgcggcg cctgacgccc tttcacggta taaacaggcc
     9241 ctccctgcaa cacacgcgcc ttgcgccgtg cctcttccgg attgtccaaa gccgttttcg
     9301 caaacgtttc aggttcggca gccttatccg aagacggctt ttcggttgcc gcgccttgtg
     9361 cggcggccga cttgcccttt ccgccatcga agtgggattt tcccgcttcg atatttcgca
     9421 ccttatccga agacggcttt tcagttgccg cattttttgc agcagccgcc ttgcccgcaa
     9481 caggcgcgtc ttttgcccgg gcaggctgcg ccctgcccgc cggtttcccg gcagaagcgg
     9541 catcgcgcgg ccgcgccatc accttggccg gcgcccttgc ttcctgcgtc ggacgataat
     9601 cccgacccgg ctcggacggc acggcttccg acaaaccgcc cgcccgcaag gtttccgcct
     9661 cccgcccctt caaataacgg cggccgtcgg agacaaggcc gtcagagttg gaaggaccgg
     9721 ccatatcggc aaactcctcc ggcatcccgc ctttgcccgg cctgcccggc acacccgcaa
     9781 gcgcatcaat atgcctgcgg tccgtatgct cgaaacggta ttcgccgccc cccaaaggca
     9841 cacccgcctt ttccggcctg cgcctgtccg ccgccaaacg gcgcgtgaaa tccgccgccg
     9901 catccgccat ccgtttctta ggcgataccc tgcccgccga ttccgcaacc tgcggattca
     9961 ataccggcaa caccgtatcg gggcgtttgc ccgcaacagg cgcacgtttc ccgccgtccg
    10021 tcccggcaag gttttcagac gcggacaggc cgggcgcggc accttccgcg cgcgcccgaa
    10081 cctgtaagtt ttgccgacgg gccggcgcat tgccggacgc aacggcggac cctggcaaac
    10141 cctgcaaggc agccgcattt gcatccgccc ccgcatcagg ggtcaaaccc ctgccgcctt
    10201 gggtcaaacc ctgccgcaca tcctgccgca catcctgcgc caaaccctta tcttccgtgg
    10261 gtaaagcccg ggtcaaaccc ctgccgccgc cgacaacggc ctcagacgcg ccgtcatccg
    10321 gcaacgccgt ccgaaccccc tgcaaacgct ccccctcgcg gctcaacagc ggcacgctcc
    10381 aaccgttgtt gcggcggtaa ccgtaaaccg cacggttaag cctgtccaac acatccgccg
    10441 attccggatg ttgcgcacgg taagcgcgta cagccccggc cgattccgcc aaaccctcag
    10501 gataatgtcc gcgcatatcc gccatacccg cctcccggcg cataatcccg tccgccgtat
    10561 agtccgccac cgtctgcgca tgacggcgca cccattcagg cagcgcgtca aaccgcctgc
    10621 gcgattcctt atccaacgca tcggcaggga cggaaaaccc ttttttagga acaggcacgg
    10681 catccgccat acgcacgggc ggcggcaggt aaccctgttt ggcttcggaa gccgcctgat
    10741 aatccgcctc aatccgcgcg tgatacgcct gctcgatttt tcggcgcaca ggcgcggcga
    10801 tttgcccgaa atccgcaacg cccttaatat caaggcccgc ctccttcgcc aaagccttgc
    10861 gcccccgggt atccaagccg tcgaaatatt ggcccgcagg cagcggcgag acccgcgcaa
    10921 tcccgcccga agcggcggcg gcagaaccgc ccggcgcaac cgaagccgca ccgcgcggcg
    10981 caccgccggg gcgcacattg ccgtaagcgg acggaacacc gcccctgtcc gcatccgccg
    11041 accgtccgga cggcacatca tccgcaaccg accgggcttc catatcgtca gacaccgcag
    11101 acggcacagc cgcgcccgaa tccgccgcca aagcagcggc cgcagaaacc gcaccgtcat
    11161 ccggattaat ccccatcgcc tccgacggct tggcccggta ttcggccgcc atgtccgcat
    11221 actgacgcgc caaaccgtcc ggcatcacgc ccgtatccaa aaattccgcc ccgtcctccg
    11281 acgggatacc cgaaacatcc ggctgttttt ccgtcccgcg cgccaattcc tccgcgcggg
    11341 gcgtattgcc gtcggcaggg ccgctgaaaa accgccccgc ctcctcctgc ttcgtacggt
    11401 c
//
LOCUS       DAXFZM010000077        11018 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.077, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000077 DAXFZM010000000
VERSION     DAXFZM010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11018)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11018)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11018
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.077"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(25..1053)
                     /gene="trpD"
                     /locus_tag="ACFJAG_001702"
     CDS             complement(25..1053)
                     /gene="trpD"
                     /locus_tag="ACFJAG_001702"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004048 - anthranilate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HFC3980945.1"
                     /translation="MITPQQAIERLISNNELFYDEMTDLMRQMMSGKVPPEQIAAILT
                     GLRIKVETVSEITAAAAVMCEFASKVPLEDADGLVDIVGTGGDGAKTFNISTTSMFVA
                     AAAGAKVAKHGGRSVSSSSGAADVMEQMGANLNLTPEQIAQSIRQTGIGFMFAPNHHS
                     AMRHVAPVRRSLGFRSIFNILGPLTNPAGAPNQLLGVFHTDLCGILSRVLQQLGSKHV
                     LVVCGEGGLDEITLTGKTRVAELKDGKISEYDIRPEDFGIETRRNLDEIKVANTQESL
                     LKMNEVLDGKEGAARDIVLLNTAAALYAGNIAASLSDGISAAREGIDSGRAKAKKEEF
                     VGFTRQFA"
     gene            complement(1117..1707)
                     /locus_tag="ACFJAG_001703"
     CDS             complement(1117..1707)
                     /locus_tag="ACFJAG_001703"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046820 - 4-amino-4-deoxychorismate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HFC3980946.1"
                     /translation="MLLFIDNYDSFTYNIVQYFAELGQEVAVRRNDDITLEEIEALNP
                     QYLVIGPGPCSPKEAGISVEAMRHFAGRLPIMGVCLGHQTIGEAFGGDVVRAKTLMHG
                     KVSPVSHSGKGMFKGLPNPVTCTRYHSLVIERGTLPDCLEITAWTEDGEIMGVRHKEY
                     AVEGVQFHPEALLTERGHDMLNNFLVEFQNFKPQKI"
     gene            2118..4394
                     /gene="znuD"
                     /locus_tag="ACFJAG_001704"
                     /gene_synonym="tdfJ"
     CDS             2118..4394
                     /gene="znuD"
                     /locus_tag="ACFJAG_001704"
                     /gene_synonym="tdfJ"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_118820519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent zinc receptor ZnuD"
                     /protein_id="HFC3980947.1"
                     /translation="MAQITLKPIVLSILLINTPLLAQAHETEQSVGLETVSVVGKSRP
                     RATSGLLHTSTASDKIISGDTLRQKAVNLGDALDGVPGIHASQYGGGASAPVIRGQTG
                     RRIKVLNHHGETGDMADFSPDHAIMVDTALSQQVEILRGPVTLLYSSGNVAGLVDVAD
                     GKIPEKMPENGVSGEAGLRLSSGNLEKLTSAGINIGLGKNFVLHTEGLYRKSGDYAVP
                     RYRNLKRLPDSHADSQTGSIGLSWVGEKGFIGAAYSDRRDRYGLPAHSHEYDDCHADI
                     IWQKSLINKRYLQLYPHLLTEEDIDYDNPGLSCGFHDGDGAHAHTHNGKPWIDLRNKR
                     YELRAEWKQPFPGFEALRVHLNRNDYHHDEKAGDAVENFFNNKTHNARIELRHQPIGR
                     LKGSWGVQYLGQKSSALSAIPETVQQPMLIDNNVRHYSFFGVEQANWDNFTLEGGVRV
                     EKQKASIRYDKALIDRENYYNQPLPDLGAHRQTARSFALSGNWYFTPHHKLSLTASHQ
                     ERLPSTQELYAHGKHVATNTFEVGNKHLNKERSNNIELALGYEGDRWQYNLAAYRNRF
                     GNYIYAQTLNDGRGPKSIEDDSEMKLVRYNQSGADFYGAEGEIYFKPTPRYRIGVSGD
                     YVRGRLKNLPSLPGREDPYGKRPFIAQDDQNAPRIPAARLGFHLKTSLTDRIDANLDY
                     YRVFAQNKLARYETRTPGHHMLNLGANYRRNTRYGEWNWYVKADNLLNQSVYAHSSFL
                     SDTPQMGRSFTGGVNVKF"
     gene            complement(4934..5713)
                     /locus_tag="ACFJAG_001705"
     CDS             complement(4934..5713)
                     /locus_tag="ACFJAG_001705"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HFC3980948.1"
                     /translation="MNRLYPHPIIAREGWPIIGGGLALSLLVSMCCGWWSLPFWVFTV
                     FALQFFRDPAREIPQNPEAVLSPVDGRIVVVERARDPYRDVDALKISIFMNVFNVHSQ
                     KSPADCTVTKVVYNKGKFVNADLDKASTENERNAVLATTASGREITFVQVAGLVARRI
                     LCYTQAGAKLSRGERYGFIRFGSRVDVYLPVDAQAQVAIGDKVTGVKTVLARLPLTDS
                     QADPVSQAASVETAANPSAEQQQIEAAAAKIQAAVQDVLKD"
     gene            5867..8716
                     /gene="uvrA"
                     /locus_tag="ACFJAG_001706"
     CDS             5867..8716
                     /gene="uvrA"
                     /locus_tag="ACFJAG_001706"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HFC3980949.1"
                     /translation="MCNHHPRHSHDNDTIRIRGARTHNLKNIDLDIPRHKLVVVTGLS
                     GSGKSSLAFDTLYAEGQRRYVESLSAYARQFLQMMDKPDVDLIEGLSPAISIEQKSTS
                     HNPRSTVGTVTEIHDYLRLLYARVGTPYCPEHKLPLSSQTVSQMVDAVLKLPEDTRVM
                     ILGPAVRERKGEFVDFFADLQAQGFARVRVDGEVYQLDEVPKLEKNIKHNIDVVIDRV
                     KVKADIKQRLAESFETALRHGNERALAMEMDSGEEHWFSARFACPVCSYSLPELEPRL
                     FSFNNPMGSCPTCDGLGNTNFFDPEKVVAHPELSLATGAIDGWDKRNQFYFQMIQSLA
                     HHYKFDVNVAWETLPEKVKKVVLHGSGKEVIDFTYLSERGTTFNRSHAFEGIIPNLER
                     RYRETDSETVREKLREYQNHRACPSCGGARLRKEARYVYVGGEPLHEVSAWPLTKTHR
                     FFETLDLDGNKKQIAEKILKEITERLGFLINVGLDYLNLSRSAETLSGGEAQRIRLAS
                     QIGSGLTGVMYVLDEPSIGLHQRDNDRLLATLKRLRDLGNSVIVVEHDEDAIREADFV
                     VDMGPGAGEHGGNVLIADTPENVAKCEKSVTGQYLGGKKSIAVPSERTPVNPDRMLVL
                     KGARGNNLKNVTLELPLGLITCITGVSGSGKSTLINDTLAKITARELNRAQEEPAPYD
                     DIRGLEHLDKVINVDQSPIGRTPRSNPATYTGLFTPIRELFAGVPLSRERGYNVGRFS
                     FNVKGGRCEACQGDGVIKVEMHFLPDVYVPCEVCHGKRYNRETLEIQYKGKNISQVLD
                     MTVEEAREFFDAVPTVSRKLQTLMDVGLGYIRLGQSATTLSGGEAQRVKLALELSKRD
                     TGRTLYILDEPTTGLHFADIALLLEVIGRLKGKGNSIVIIEHNLDVIKTADWIVDLGP
                     EGGDGGGKVIAKGSPEEVAKVKGSYTGKYLKVVLK"
     gene            8734..9375
                     /locus_tag="ACFJAG_001707"
     CDS             8734..9375
                     /locus_tag="ACFJAG_001707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Eco29kI family restriction endonuclease"
                     /protein_id="HFC3980950.1"
                     /translation="MNNNFDRSKHIYHNEAFVELVKDAIRFFHGTPVHTLPPPKQFKG
                     AGVYAIYYIGNNPLYKQYADWNRLSYNAPIYVGKAVPKGWRQARNSDNALNQSTELFH
                     RLKEHSRSIAAVSDLDPSDFMCRFVIFEGAGSDMIGTIEAALIKLHKPLWNSCVDGFG
                     NHDPGKGRYEQAKSDWDVLHSGRVWADRLNGIPNSYESILENINTHLEIIKRK"
     gene            9379..10512
                     /locus_tag="ACFJAG_001708"
     CDS             9379..10512
                     /locus_tag="ACFJAG_001708"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003886 - DNA
                     (cytosine-5-)-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HFC3980951.1"
                     /translation="MKSLEIFSGAGGLAKGLELAGFQHASFIELNKDACNSLRSNFNP
                     KLVYQGDVADFDLSSQEGIEVIAGGPPCQPFSLGGKHLAHEDRRDMFPHAVRYVEYYR
                     PKAFIFENVKGLLRKSFADYFEYILLRLTYPNLGILQNEDWKGHLTRLKEIEFNLYKG
                     IKYKVSYQLLNAADYGVPQKRERVVIVGIRADLDIDWKFPKRTHSEDRLNWEKYVTGE
                     YWEKHNEPKRFNKDIAEKLQKKYGIFEPEKKPWQTVRDTLSDIPHPLGNHKITGHEYR
                     DGARIYPGHTGSGIDEPSKTIKAGGHGVPGGENMIRYDDGTVRYFTSYEAKLLQTFPE
                     EFVISGAWGEAMRQIGNAVPVKLSEILGKHLMGVLSEKSSLHN"
     gene            10820..11008
                     /locus_tag="ACFJAG_001709"
     CDS             10820..11008
                     /locus_tag="ACFJAG_001709"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980952.1"
                     /translation="MDVQKQYPFETVAVCVLPNHIHAIWTLPPDDADYSLLRRLIKTK
                     FSAYSPHTKNLGAVLDYP"
BASE COUNT         2912 a         3097 c         2557 g         2452 t
ORIGIN      
        1 ttgctttata tcaagtttgc cggcttaggc gaattgccgt gtaaaaccga caaactcctc
       61 ttttttcgcc ttcgccctac ctgaatcgat gccttcccgt gcggcagata tgccgtctga
      121 aagcgaagca gcgatatttc cggcatataa ggcggcggcg gtattaagca atacgatatc
      181 gcgcgccgcc ccttctttcc cgtccagtac ctcgttcatt ttcaacaaag attcctgagt
      241 attggcaact ttgatttcat ccaaattgcg gcgggtttcg ataccgaaat cttctgggcg
      301 gatgtcgtat tcgctgattt ttccgtcttt gagttcggca acgcgcgttt tgcccgtcag
      361 tgtaatttca tccaaaccac cctccccgca aacgaccaaa acgtgttttg agccgagttg
      421 ttgcaagacc cgcgacaaaa tgccgcacaa atcggtgtgg aacacgccca aaagctggtt
      481 cggcgcgccc gcaggattgg ttaacggacc caatatgttg aaaatgcttc ggaaaccgag
      541 cgaacggcgc accggggcga catggcgcat ggcactgtgg tgattgggtg cgaacataaa
      601 ccctataccg gtctgcctga tactttgggc aatctgttcg ggagtcaggt tgaggtttgc
      661 gcccatttgc tccatcacgt cagccgcacc gctggaggaa gagaccgacc ggcctccgtg
      721 tttggcaacc tttgcgcctg ccgctgcagc aacaaacatc gaagtcgtcg aaatattgaa
      781 ggttttcgcg ccatccccgc ccgtaccgac gatatcgacc agcccgtccg catcctccag
      841 cggcactttt gacgcaaact cgcacatcac ggcggcggcg gcggtgattt cggaaacggt
      901 ttcaaccttg atacgcaagc cggtcaaaat cgccgcaatt tgttcgggcg gcacttttcc
      961 gctcatcatt tggcgcatca agtcggtcat ttcatcgtaa aacaactcgt tattgctgat
     1021 taatcgttcg atagcctgtt gcggtgtaat cattttttgt cctccgttca atattcggac
     1081 gaaaatgccg cccgaagggc ttcagacggc atcacgtcag attttttgcg gtttgaagtt
     1141 ttgaaattca actaaaaaat tgttcaacat atcatgtccg cgttcggtca agagggcttc
     1201 ggggtggaac tgcacgccct cgacggcata ttccttatgg cgcacgccca taatttcgcc
     1261 gtcttccgtc cacgccgtga tttccaagca atccggcagc gtgccgcgtt cgataacgag
     1321 gctgtgataa cgcgtacagg taaccggatt gggcaaaccc ttaaacatac ccttgcccga
     1381 atgggacacg ggcgacacct taccgtgcat caaggttttt gcccgtacca catctccacc
     1441 gaacgcttcg cctatcgtct gatgcccgag gcacacgccc ataatcggca gccggccggc
     1501 aaaatggcgc atggcttcta ctgaaatacc cgcctcctta ggggaacacg gtccgggacc
     1561 gataacgaga tattgcggat tcaatgcctc gatttcctcc aacgtaatat catcgttgcg
     1621 gcgcacggcg acttcctgcc ccaattctgc gaaatactgg acgatgttgt aagtaaaact
     1681 gtcgtaattg tcgataaaca aaagcatttt gtgattaacc tattgattta taatttgttt
     1741 attattaact gcatttccga tacccccatc cataccccct tatatcttag cgtgcccgat
     1801 gcgccctcgt gaatctggcg cagagcctcg cgttctgaca agtacgccat tttgccacct
     1861 tttcgaccgt tcgggaacgt accgttttta tgccctcata aattttggtt atccgataac
     1921 taacatatag cggcgttcgt gttcacatca ttaacttccc taaaattagg gttaatacaa
     1981 attaacgcca ttaaatatca caaccgtgtc atttgaaaaa cttttgccta tgccctctga
     2041 gtattctcaa aatcttatga tataaaaaat gcaatgttat ataataacaa aattttgaaa
     2101 tgcgacgaga agccaaaatg gcacaaatca cactcaaacc aattgtttta tcaattcttt
     2161 taatcaacac acccctcctc gcccaagcgc atgaaactga gcaatcggtg ggcttggaaa
     2221 cggtcagcgt cgtcggcaaa agccgtccgc gcgcgacttc ggggctgctg cacacttcga
     2281 ccgcctccga caaaatcatc tccggcgata ctttgcgcca aaaagccgtc aacttgggcg
     2341 acgctttgga cggcgtaccg ggcattcatg cctcgcaata cggcggcggc gcatccgctc
     2401 ccgttattcg cggtcaaacg ggcagacgga ttaaagtatt gaaccatcac ggcgaaacgg
     2461 gcgatatggc ggacttttct cccgatcacg ccattatggt agataccgcc ttgtcgcaac
     2521 aggttgaaat cctgcgcggg ccggttacgc tcttgtacag ctcgggcaat gtggcggggc
     2581 tggtcgatgt tgccgatgga aaaatccccg aaaaaatgcc tgaaaacggc gtatcgggcg
     2641 aagccggatt gcgtttgagc agcggcaatt tagaaaaact gacatccgca ggcatcaata
     2701 tcggactggg caaaaacttc gtgctgcata ccgaaggctt gtaccgcaaa tcgggcgatt
     2761 acgccgtacc gcgttaccgc aatctgaaac gcctgcccga cagccatgcc gattcgcaaa
     2821 cgggcagcat cgggctgtct tgggtgggcg aaaaaggctt tatcggcgca gcatacagcg
     2881 accgtcgcga ccgctacggc ctgcctgccc acagccacga atacgatgat tgccacgccg
     2941 acatcatctg gcaaaagagt ttgatcaaca aacgctattt gcagctttat ccgcacttgt
     3001 tgaccgaaga agacatcgat tacgacaatc cgggcttgag ctgcggcttc cacgacggcg
     3061 acggtgcaca cgcacacacc cacaacggca aaccgtggat agacctgcgc aacaaacgct
     3121 acgaactccg cgccgaatgg aagcagccat tccccggttt tgaagccctg cgcgtacatc
     3181 tgaaccgcaa tgactaccac cacgacgaaa aagcaggcga tgcagtagaa aacttcttca
     3241 acaacaaaac acacaacgcc cgtatcgagt tgcgccacca acccataggc cgtctgaaag
     3301 gcagctgggg cgtgcaatat ttgggacaaa aatccagcgc gctttccgcc attcccgaaa
     3361 ccgtccaaca accgatgttg attgacaaca atgtccgcca ttacagcttt ttcggtgtag
     3421 aacaggcaaa ttgggacaac ttcacgcttg aaggcggcgt acgcgtggaa aaacaaaaag
     3481 cctccatccg gtacgacaaa gcattgattg atcgagaaaa ctactacaac cagcccctgc
     3541 ccgacctcgg cgcgcaccgc caaaccgccc gctcgttcgc actttcgggc aactggtatt
     3601 tcacgccaca ccacaaactc agcctgaccg cctcccatca ggaacgcctg ccgtcaacgc
     3661 aagaactgta cgcacacggc aagcacgtcg ccaccaacac ctttgaagtc ggcaacaaac
     3721 acctcaacaa agagcgttcc aacaatatcg aactcgcgct gggctacgaa ggcgaccgct
     3781 ggcaatacaa tctggcagcc taccgcaacc gattcggcaa ctacatttac gcccaaacct
     3841 taaacgacgg acgcggcccc aaatccatcg aagacgacag cgaaatgaag ctcgtgcgct
     3901 acaaccaatc cggtgccgac ttctacggcg cggaaggcga aatctacttc aaaccgacac
     3961 cgcgctaccg catcggcgtt tccggcgact atgtacgagg ccgtctgaaa aacctgccgt
     4021 ccctacccgg cagggaagat ccctacggca aacgtccctt catcgcgcag gacgaccaaa
     4081 acgccccccg cattccggct gcgcgcctcg gcttccacct gaaaacctcg ctaaccgacc
     4141 gtatcgatgc caatttggac tactaccgcg tgttcgccca aaacaaactc gcccgctacg
     4201 aaacgcgtac gcccggacac catatgctca acctcggtgc aaactaccgc cgcaatacgc
     4261 gctatggcga gtggaattgg tacgtcaaag ccgacaacct gctcaaccaa tccgtttacg
     4321 cccacagcag cttcctctct gatacgccgc aaatgggccg cagctttacc ggcggcgtaa
     4381 acgtgaagtt ttaaaatcgg acaggcaaac aaaaaaggtt ttcagacggc attctgaaaa
     4441 cctttttttc tttttaatca acttgttagg aaatatggca aagacaagga acaaaccact
     4501 gtgccatcat tcccattttc tttgtttcat cattcttgct ttcacgccgt cattctcgca
     4561 aaagcagaaa aatcaaaagc aaaaacccaa gatcccatca ttcccgcgca ggcgggaatc
     4621 caattcattc ggtttcagcc gtttccgata aatcaccgta acgttaagtt cccggattcc
     4681 cactttcgtg ggaatgacgg cgtaaaggtt tctgtttttt aagttttagg taactaatga
     4741 gtcgtcattc ccgcgcaggc gggaatccaa ttcgttcggt ttctgttatt tctgataaat
     4801 caccgtaacg ttaagttccc ggattcccat tttcgtgaac ataacggtgt gaacattagc
     4861 aaaaattcaa aaaaccaaac ttcctcattc gtgtgaatga tggtactgat attttctatt
     4921 tcagttcgca aaattaatct ttcaacacat cttgcacagc cgcctgaatc ttagccgccg
     4981 ccgcttcgat ttgctgctgt tcggcagatg ggtttgccgc tgtttcaacc gaagcagctt
     5041 gtgaaacagg atcggcttga gaatcagtca gcggcaaacg cgccaatacg gtttttacgc
     5101 cggttacttt atcaccaatc gccacttgcg cctgcgcatc gacaggcaga tacacatcca
     5161 cgcgcgaacc gaagcggata aagccatagc gttcgccgcg ggacagtttc gcacctgctt
     5221 gggtgtaaca caaaatacgg cgtgccacca gaccggccac ttgaacaaaa gtaatttcac
     5281 gaccggaagc cgtagtcgcc aaaaccgcgt tgcgttcgtt ttccgtgctg gctttgtcca
     5341 aatccgcatt cacgaatttg cctttgttat agaccacttt cgttaccgta caatcggcag
     5401 gcgatttttg cgaatgcacg ttgaacacgt tcataaaaat actgattttc aaagcatcga
     5461 catcacgata cggatcgcgt gcgcgctcga ccaccacgat acggccgtca accggactca
     5521 acaccgcttc aggattttgc ggaatttcac gcgcagggtc gcggaaaaac tgcaatgcaa
     5581 atacggtaaa cacccaaaac ggcaaagacc accagccgca gcacatcgac accagcaggc
     5641 tcaaagccaa accgccgccg ataatcggcc agccctcacg ggcgataatc gggtggggat
     5701 aaagacggtt catttgtcat ccttttattc aaatatatta aatagcgaca ttataacgga
     5761 atccgccgcg ttccgccgac aaatgccgtc tgaacgcggc ttcagacggc atccgagaaa
     5821 gtgctacaat atcggttttc ctttattttt tcaggcggca tccattatgt gcaaccatca
     5881 tccccgacat tcgcacgaca acgacaccat ccgcattcgc ggcgcgcgca cgcataattt
     5941 gaaaaacatc gatttggaca ttccccgcca caagctcgtg gtggtaacag gattgtcagg
     6001 cagcggcaaa tcatcgctgg cgtttgatac tttatatgcc gaagggcagc ggcgttatgt
     6061 cgagagcctg tctgcctatg cgcggcagtt tttgcagatg atggacaaac ccgatgtcga
     6121 tttgattgaa ggcctgtcgc ctgcgatttc catcgagcag aaatccacca gccacaatcc
     6181 gcgttccacc gtcggcacgg taacggaaat ccacgactac ctgcgccttt tatacgcccg
     6241 tgtcggcacg ccgtattgcc ccgaacacaa gctgccgcta tccagccaaa ccgtatctca
     6301 aatggtcgat gccgtattaa aactgccgga agatacgcgc gtgatgattc tggggccggc
     6361 ggtgcgcgag cgtaagggcg agtttgtcga tttctttgcc gacttgcagg cgcaaggctt
     6421 tgcccgtgtg cgcgtggacg gcgaagtcta tcagcttgac gaagtaccga agctggaaaa
     6481 aaacatcaaa cacaatatcg acgtcgtcat cgaccgcgtg aaagtgaaag ccgacatcaa
     6541 acaacgactg gcggaaagtt ttgaaaccgc gctgcgccac ggcaacgagc gcgcgctggc
     6601 gatggaaatg gacagcggcg aagaacattg gttttccgcg cgttttgcct gccccgtatg
     6661 ctcatacagc ctgcccgaat tggaaccgcg cctcttttcg ttcaacaacc cgatgggttc
     6721 ctgcccgact tgcgacggct tgggcaacac caatttcttc gaccccgaaa aagtagtcgc
     6781 ccatcccgaa ttgtcgctgg caaccggcgc gattgacggt tgggacaaac gcaaccaatt
     6841 ctatttccaa atgattcaat cgctggcgca tcattataaa tttgatgtca acgtcgcttg
     6901 ggaaactttg cctgaaaaag tcaaaaaagt cgtgttgcac ggctcgggca aagaagtcat
     6961 tgatttcacc tacctgtccg aacgcggcac caccttcaac cgcagccacg ccttcgaggg
     7021 catcatcccc aatctcgaac gccgctaccg cgaaaccgac agcgaaaccg tgcgcgaaaa
     7081 actgcgcgag taccaaaatc accgtgcctg cccgagctgc ggcggcgcac gtttgcgcaa
     7141 agaagcacgc tacgtttacg tcggcggcga accgttgcac gaagtctccg cctggccgct
     7201 gaccaaaacc caccgattct tcgaaacgct ggatttggac ggcaacaaaa aacagatcgc
     7261 cgaaaaaatc ctcaaagaaa tcaccgagcg gctcggcttc ttgattaacg tcgggctgga
     7321 ttacctgaat ttaagccgtt ccgccgaaac cctttccggc ggcgaagccc agcgcatccg
     7381 cctcgccagc caaatcggca gcggcctgac cggcgtgatg tacgttttgg acgaaccctc
     7441 catcggcctg caccagcgcg acaacgaccg cctgctcgcc accctcaaac gcctgcgcga
     7501 tttgggcaac agcgtaattg tggtcgaaca cgacgaagac gccatccgcg aagccgattt
     7561 cgtcgtcgat atgggccccg gcgcgggcga acacggcggc aacgtactga ttgccgacac
     7621 acccgaaaat gtcgccaaat gcgaaaaatc cgttaccgga caatacctcg gcggcaaaaa
     7681 atccattgcc gtgccgtctg aacgcacgcc cgtcaatccc gaccgaatgc tcgtcctcaa
     7741 aggtgcgcgc ggcaacaacc tcaaaaacgt caccctcgag ttgccgctcg gtttgattac
     7801 ctgcatcacc ggcgtatccg gcagcggcaa atccaccctg attaacgaca ccctcgccaa
     7861 aatcaccgcc cgcgaactca accgcgccca agaagaaccc gccccatacg acgacatccg
     7921 cggcctcgaa cacctcgaca aagtcatcaa cgtcgaccaa tcccccatcg gccgcacccc
     7981 gcgctccaac cccgccacct acaccggcct gtttaccccc atccgcgaac tcttcgccgg
     8041 cgtacccctc tcgcgcgaac gcggctacaa cgtcggcaga ttctccttca acgtcaaagg
     8101 cggccgctgc gaagcctgcc aaggcgacgg cgtaatcaaa gtcgaaatgc acttcctgcc
     8161 cgacgtgtac gtcccctgcg aagtctgcca cggcaaacgc tacaaccgcg aaaccctcga
     8221 aatccaatac aaaggcaaaa acatcagcca agtcctcgac atgacggtcg aagaagcccg
     8281 cgaatttttc gacgccgtcc ccaccgtatc gcgcaaactg caaaccctga tggacgtagg
     8341 tctcggctac atccgcctcg gccaatccgc caccaccctc tccggcggcg aagcccagcg
     8401 cgtcaaactc gccttggaac tctccaaacg cgacaccggc agaacgctct acatcctcga
     8461 cgaacccacc accggcctgc acttcgccga catcgccctg ctgctggaag tcataggccg
     8521 tctgaaaggc aaaggcaact cgattgtgat tatcgagcat aatctggatg taattaaaac
     8581 cgcggattgg attgtggact tagggccgga aggcggcgat ggtgggggta aggttatcgc
     8641 gaaaggtagc cctgaggaag tggcgaaggt taaggggagt tataccggga agtatttgaa
     8701 agtggttttg aagtaaacga acggatatag aaaatgaaca ataattttga ccgcagcaag
     8761 catatctatc ataacgaagc ttttgtagaa ctggttaaag atgccatacg cttttttcat
     8821 ggtacgcctg ttcatacact tcctccaccc aaacagttca aaggtgcagg ggtttatgcg
     8881 atttactata tcggtaacaa tcctttgtac aaacaatatg cggactggaa cagattatcc
     8941 tacaatgcgc caatttatgt tggcaaggcc gtccccaaag gctggcggca agcaagaaat
     9001 tctgataatg cgctaaacca atcaaccgaa ctgttccacc ggttgaaaga acacagcagg
     9061 agtattgccg ctgtttctga tttagatcct tccgatttca tgtgcagatt cgttatcttt
     9121 gaaggtgccg gttctgacat gataggcaca atcgaagctg ccctgattaa attacacaaa
     9181 cctctatgga actcttgtgt cgatggtttc ggaaaccacg accccggaaa aggccgttac
     9241 gaacaagcca aatcggattg ggatgtcctt catagcgggc gggtttgggc agataggcta
     9301 aacggcatac cgaatagcta tgagtccata cttgaaaata tcaacacaca tttagagata
     9361 ataaagagaa aataacctat gaagtctttg gaaatttttt ccggcgcggg cgggttggca
     9421 aaaggccttg aacttgcagg attccaacat gcatctttta ttgaactcaa taaagatgca
     9481 tgcaattctt taagaagcaa ctttaacccc aagcttgttt atcagggaga tgtggcagat
     9541 tttgatcttt ccagtcaaga aggcatagaa gtcattgcag gcggtcctcc ttgccagccc
     9601 ttttcattgg gcgggaaaca ccttgcccat gaagacagaa gggatatgtt tcctcatgcg
     9661 gtcagatatg tggagtatta ccgccccaaa gcttttatct ttgagaatgt aaaaggactt
     9721 ttaagaaaat cattcgctga ttattttgaa tatatcctac ttcggcttac ttatccgaat
     9781 cttggtattt tgcagaatga agattggaaa ggccatctga cacggctgaa agaaattgaa
     9841 ttcaatttat ataaaggaat caaatataag gtttcatatc aattgttgaa tgcagctgat
     9901 tacggagtgc cgcaaaaacg cgaacgcgtg gttatcgtag gtatccgggc cgatttggat
     9961 attgattgga aattcccaaa aagaacacat tccgaagaca ggttgaattg ggaaaagtat
    10021 gtaacggggg aatactggga aaaacacaac gaacccaaaa gattcaataa agatattgct
    10081 gaaaagttac aaaaaaaata cggtatattc gaaccagaaa aaaaaccttg gcaaacggta
    10141 agggatacct tgtccgacat cccgcatcct ttggggaatc ataaaattac aggacatgaa
    10201 tatagggatg gcgcaagaat ttatcccgga cacacaggaa gcgggataga cgaaccgtcc
    10261 aaaaccatta aagcaggtgg gcatggcgtt cccggcggag aaaatatgat tcgttatgat
    10321 gatggaacag tcagatactt taccagctat gaagcaaaac ttcttcaaac attccctgaa
    10381 gaatttgtca tttctggagc ttggggagaa gcaatgcgac aaattggcaa tgcggttcct
    10441 gtcaaattgt cggaaatttt aggcaaacat ctgatggggg tgttgtcgga gaaaagcagc
    10501 ctgcacaact aacccgccca ctgcgtgtgt gcggtacgca cgcggttgct tgattgacgg
    10561 tttgccgttt caacttttaa cttcgttgaa gctagtgctt tcagacggcc tccaatgtcg
    10621 tttggaaaca tcaggtccaa caaagttaaa ccttaaacaa caaaccattc cttctccaac
    10681 acccaaacca caaacaaaaa tcctatggcg cgttatcgca gaaacttcat tgccggcggc
    10741 acattctttt tcaccgtcaa acccgccgcc ccgaaatcgc gtctgcttgt cggacatatc
    10801 ggcttcgcgt gcggcttata tggatgtgca aaaacaatat ccctttgaaa ccgtcgccgt
    10861 atgcgtgctg ccgaaccata ttcacgccat ttggacgctg ccgcccgacg atgcggatta
    10921 ttccctactc cggcggctga ttaaaaccaa attctccgca tattcccctc atactaaaaa
    10981 cttaggggct gtactagatt atccctaaat tccacacc
//
LOCUS       DAXFZM010000078        10512 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.078, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000078 DAXFZM010000000
VERSION     DAXFZM010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10512)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10512)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10512
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.078"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            175..1608
                     /gene="ccoN"
                     /locus_tag="ACFJAG_001710"
     CDS             175..1608
                     /gene="ccoN"
                     /locus_tag="ACFJAG_001710"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045278 - plasma membrane respiratory
                     chain complex IV [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit I"
                     /protein_id="HFC3980953.1"
                     /translation="MDTQTYNYKVVRQFAIMTVVWGIVGMLVGVIVAAQLFAPALDLS
                     NIGPWFHFGRLRPLHTNAVIFAFGGCGLIGTSYYVVQRTCNTRLFGGWLPAFTFWGWQ
                     AVIVAAVVSFPMGWTQGKEYAELEWPIDILITLVWVAYAIVFFGTIAKRKVKHIYVAN
                     WFYGGFILAVALLHIVNNISIPAGLMKSYPVYSGAIDAMVQWWYGHNAVGFFLTAGFL
                     GMMYYFVPKQAARPVYSYRLSVVHFWALIFTYMWAGPHHLHYTALPDWTQSLGMVLSL
                     ILFAPSWGGMINGIMTLSGAWDKLRTDPILKFLIVSLSFYGMSTFEGPMMSIKTVNAL
                     SHYTDWTVAHVHAGALGWVGFVTIGSVYYMIPRLFGKEQMHSTKLVEAHFWIATIGVV
                     LYIAAMWIAGVMQGLMWSSLNDDGTLTYSFVESVKRTMPYYMIRFAGGLLYLSGMCIM
                     AYNVYRTAIGGKAVDAEIPAVSQTQHH"
     gene            1635..2246
                     /gene="ccoO"
                     /locus_tag="ACFJAG_001711"
     CDS             1635..2246
                     /gene="ccoO"
                     /locus_tag="ACFJAG_001711"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit II"
                     /protein_id="HFC3980954.1"
                     /translation="MKLQQLAEEKIGVLIVFTLLVVSVGLLIEVVPLAFTKAATQPAP
                     GVKPYNALQVAGRDIYIREGCYNCHSQMIRPFRAETERYGHYSVAGESVYDHPFQWGS
                     KRTGPDLARVGGRYSDEWHRIHLLNPRDVVPESNMPAFPWLARNKVDVDATVANMKAL
                     RKVGTPYSDEEIAKAPEALANKSELDAVVAYLQGLGLALKNVR"
     gene            2251..2421
                     /locus_tag="ACFJAG_001712"
     CDS             2251..2421
                     /locus_tag="ACFJAG_001712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CcoQ/FixQ family Cbb3-type cytochrome c oxidase
                     assembly chaperone"
                     /protein_id="HFC3980955.1"
                     /translation="MDINGIRALFTVWIFICFLLVLYIVFNRRNKKNYDDAANSIFAE
                     NQDAQDKKSENR"
     gene            2445..3764
                     /gene="ccoP"
                     /locus_tag="ACFJAG_001713"
     CDS             2445..3764
                     /gene="ccoP"
                     /locus_tag="ACFJAG_001713"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit III"
                     /protein_id="HFC3980956.1"
                     /translation="MNATSQFTSNFWNIYIAVIVLLSFIALAWLLLSQNVVKRPKKGE
                     EVQTTGHEWDGIAEYDNPLPRWWFWLCVLTWLFGIGYLVMYPGVGDYKGLLKWTSHNQ
                     YEKEVKKADEQYGKLYAKFADMPIEKVAKDPQAKQIAQNLFNTYCIQCHGSDAKGSKG
                     FPNLTDSDWLWGGDPDKIHETIEKGRVATMPAWGPALGEEGVKDVAHYVMSLSKPKGQ
                     YDEERAARGQALFSGPPANCFTCHGDKGQGIQGLGPNLTDDVWLWGGTQKSIIETITN
                     GRSSQMPAWGHFLDKDKLHIMTAYVWGLSDKDGKAPVKKAEPAPAAEPAPSAPAGAAQ
                     AASEAKPAAAEPKAEEKAAPAAKADGKQVYETVCAACHGNAIPGIPHVGTKADWADRI
                     KKGKDTLHKHAIEGFNTMPAKGGRGDLSDDEVKAAVDYMVNQSGGKF"
     gene            4108..5517
                     /locus_tag="ACFJAG_001714"
     CDS             4108..5517
                     /locus_tag="ACFJAG_001714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY-associated TM helix domain-containing
                     protein"
                     /protein_id="HFC3980957.1"
                     /translation="MDTQIKTEAGQQNNRHYLSVWRWHFYAGLLVMPFLTLLAVTGLG
                     MLLFANITGKEGERIHVFPQAVVQPLSVQAEAARGAINPETSSVVQYIAPRADDMVAV
                     FRVNNEGKATMVAVDPYTAKVVNTMPRNQGWYHTMDEIHGDMMLGAAGDYLLETAASL
                     TIIMVVSGLYLWWAKQRGIKAMLLPPKGRARSWWRNLHGAFGTWVSLILLLFCLSGIA
                     WAGIWGGKFVQAWSQFPAGKWGVEPNPVSVVPTHGEVLNDGKVKEVPWILELTPMPVS
                     GTTVGENGINPSEPMTLETVDRFAREIGFKGRYQLNLPKGEDGVWTLSQDSMSYDMIS
                     PFADRTVHIDQYSGKILADIRFDDYNPFGKFMAASIALHMGTLGWWSVLANVVFCLAV
                     IFIGISGCVMWWKRRPSGVAGIVPPAQKIKLPVWWAMALPLLLIALLFPTALLAIAVI
                     WLLDTLLLSRIPVLRKWFK"
     gene            5618..8827
                     /gene="recC"
                     /locus_tag="ACFJAG_001715"
     CDS             5618..8827
                     /gene="recC"
                     /locus_tag="ACFJAG_001715"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009338 - exodeoxyribonuclease V complex
                     [Evidence IEA];
                     GO_function: GO:0008854 - exodeoxyribonuclease V activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit gamma"
                     /protein_id="HFC3980958.1"
                     /translation="MFYLYQSNRLESLAALFARIQKVKPLKCALQPEQIVVQSQGMRR
                     YLNTCLARDLGVAANLAFSLPAGLTWKLMKKLIPGIPELSPFAPEVMRWRLLDLFRSA
                     EFQNGAEFEDVRNVLQDYLGSGESADYQLAGQLADIFDQYLVYRPQWIDAWQQGRILG
                     LGDDEIWQSKLWRYLDDGRQSAPHRVALWEKLLAALDKDKLPERYFVFGISTMAPMYL
                     QLLHKLSEHCDVFVFALNPSGMHWGNVIEAAQILKGGGDPDLTQAGHPLLASLGKQGR
                     DFFDFLNEMEIEGETPVFEEGGRDTLLHALQTDIQNLKMPSETVGSVNTGDGSIRIVS
                     AHSPLRELQILKDKLLKILHEHPDWQPHDIAVLTPNIEPYTPFIEAVFGQAQPGAQAL
                     PYSVSDVKISRRQPLFHALSCLFDLLESRFEVDKVLVLLETAPVLRRFGLTGDDLPLL
                     HDMVADLNVRWGLDGEMRGGTDQLFTWKQAVDRMVLGWMLPEGGNPMWQDVSAWYADV
                     NQTALFGRFAAFLETLSDIARIWRQPATVGEWVARCRDLLETLFQAGPDDQKAVQNLE
                     NEWVKWQEESTLAGFFGQLPQQTVIRHIRRFLDSESEAGFLRGGITFCSMVPMRSLPF
                     KVICLLGLNDGDFPRNTKAAVFDLVAKHPAKGDRARRDDDRYLFLEALISAREILYLS
                     YIGRDIRKDEELAPSSLLGELIDTVAAMTGTNSRQLAQNWIEQHPLQAFSRRYFQEGG
                     RSDGIFGTRTDYAAALGQTPEPPRPFFDQPVENAEPVAEIGQDEFIRFWRNPVKVWLQ
                     QQLAWSEPHIGEAWEPAEPFDPQHADQIAETYIEARREGQDFAQTAARIGAESLLPSG
                     ELGRLWQQDFQTAAKQIDTAVLNSPKLPPFPYAIPSDGQILKGSLGNLYRCGQVFYAY
                     GKPNAPQRVAFLLEHLIFCAVMPSEAETRQTFIVQSGETEVLAEIAQDRALQLLSEWM
                     AFFNIGQNRPLPFFAKTSLAAAEAFAQKQDWEAALKKARTAYYGSKVSKGQKDYTEVA
                     LVFGNASQNPLEQPLFENLARLLADTLAAAEKREGTGAA"
     gene            complement(8895..10463)
                     /gene="mtrF"
                     /locus_tag="ACFJAG_001716"
     CDS             complement(8895..10463)
                     /gene="mtrF"
                     /locus_tag="ACFJAG_001716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_041421321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbgT family antimetabolite efflux transporter
                     MtrF"
                     /protein_id="HFC3980959.1"
                     /translation="MSQTDARRSGRFLRTVEWLGNMLPHPVTLFIIFIVLLLIASAVG
                     AYFGLSVPDPRPVGAKGRADDGLIHVVSLLDADGLIKILTHTVKNFTGFAPLGTVLVS
                     LLGVGIAEKSGLISALMRLLLTKSPRKLTTFMVVFTGILSNTASELGYVVLIPLSAVI
                     FHSLGRHPLAGLAAAFAGVSGGYSANLFLGTIDPLLAGITQQAAQIIHPDYVVGPEAN
                     WFFMAASTFVIALIGYFVTEKIVEPQLGPYQSDLSQEEKDIRHSNEITPLEYKGLIWA
                     GVVFVALSALLAWSIVPADGILRHPETGLVAGSPFLKSIVVFIFLLFALPGIVYGRIT
                     RSLRGEREVVNAMAESMSTLGLYLVIIFFAAQFVAFFNWTNIGQYIAVKGAVFLKEVG
                     LAGSVLFIGFILICAFINLMIGSASAQWAVTAPIFVPMLMLAGYAPEVIQAAYRIGDS
                     VTNIITPMMSYFGLIMATVMKYKKDAGVGTLISMMLPYSAFFLIAWIALFCIWVFVLG
                     LPVGPGAPTLYPAP"
BASE COUNT         2592 a         2663 c         2773 g         2484 t
ORIGIN      
        1 ataaaaaaca gattaagcaa agggttcgcc ggcggcgcga atgtaattcc gcttggcgta
       61 ataaggcaga tatgttaaat ttagaaaaaa ttacgcttgc ccggattgca ccttaaacag
      121 gctgcggaag cggcaggata aaaatcttta ttcccataat tcatggagac tctcatggac
      181 acacaaactt acaactacaa agtggtgcgc cagttcgcca tcatgactgt agtttggggg
      241 attgtgggca tgttggtcgg cgttatcgtc gccgcccagc tttttgctcc tgccctcgac
      301 ttgtctaata tcggaccttg gttccacttc ggccgcctgc gtccgctgca caccaatgcg
      361 gttattttcg catttggcgg ttgcggtctg atcggcacat catactacgt tgtccaacgt
      421 acttgtaata cccgtctttt cggcggttgg ctgccggcat ttaccttttg gggttggcag
      481 gcggtaatcg ttgccgccgt cgtcagcttc cctatgggtt ggacccaagg taaggaatat
      541 gccgaactgg aatggccgat tgacattctg attactttgg tttgggtggc ttacgccatc
      601 gtattcttcg gtacgattgc caaacgcaag gtaaaacaca tttacgttgc caactggttc
      661 tacggcggct ttattttggc ggtcgcactt ttgcacatcg tcaacaatat cagcatcccg
      721 gccggtttga tgaagtcata ccccgtctat tccggtgcga ttgatgctat ggttcaatgg
      781 tggtacgggc ataacgccgt gggcttcttc ctgactgccg gctttttggg tatgatgtac
      841 tatttcgtac ccaaacaagc agcccgcccc gtttactcct accgcctgtc cgtcgttcac
      901 ttctgggcgt tgattttcac ctatatgtgg gcgggtccgc accatcttca ctacactgcg
      961 ctgcctgact ggacgcaatc tttgggtatg gttctgtcct tgattttgtt cgcaccctct
     1021 tggggcggta tgattaacgg cattatgacc ttgtccggcg cgtgggacaa actgcgtaca
     1081 gacccgattc ttaaattcct gattgtatcc ttgtccttct acggtatgtc tacctttgaa
     1141 ggcccgatga tgtcgattaa aacggtcaat gcattgagcc actatacgga ctggaccgtc
     1201 gcgcacgttc atgcgggtgc gttgggctgg gtaggctttg taaccatcgg ttccgtctat
     1261 tacatgattc cccgtctgtt cggcaaagag cagatgcaca gcaccaagct ggtagaggcg
     1321 catttctgga ttgcgactat cggtgtggtt ctgtatatcg ccgcgatgtg gattgcaggt
     1381 gtgatgcagg gtttgatgtg gagttctctg aacgatgacg gtacgctgac ctactcgttt
     1441 gtcgaatccg taaaacgcac catgccttac tacatgatcc gttttgcagg tggtttattg
     1501 tatctgagtg gcatgtgcat tatggcgtac aacgtgtacc gcacagccat cggtggtaaa
     1561 gcagtcgatg ccgaaatccc tgcggtttcc caaacacagc accactaaaa tactaagaaa
     1621 gataggctac caaaatgaaa ttacaacaat tggctgaaga aaaaatcggc gttctgattg
     1681 tgttcacgct gcttgtagtc agtgtcggtc tgttgattga agttgtgccc ttggccttta
     1741 ccaaggcggc aacacagccg gcgccgggcg tgaagcctta caatgccctg caggttgccg
     1801 gacgcgatat ttacatccgt gagggctgtt acaactgcca ctctcaaatg attcgtccgt
     1861 tccgtgcgga aaccgagcgt tacggtcatt actctgttgc cggagagtcg gtttacgacc
     1921 atccgttcca atggggttcc aaacgtaccg gtcctgattt ggcacgtgtg ggcggccgct
     1981 attccgacga atggcaccgc atccacctgc tgaatccccg tgatgtcgtg cctgagtcca
     2041 atatgccggc attcccgtgg cttgcacgca ataaagtcga tgtcgatgca accgttgcca
     2101 acatgaaggc tttgcgtaaa gtaggtactc cttacagtga tgaggaaatt gcgaaagcgc
     2161 ctgaggcttt ggcaaacaaa tccgagctgg atgctgtagt cgcctatctg caaggattgg
     2221 gtctggcttt gaaaaacgta aggtaacatc atggatatta acggtattcg cgctcttttc
     2281 acggtatgga tctttatctg tttcctgtta gtgctctata tcgtcttcaa caggcggaat
     2341 aagaaaaact acgatgatgc cgcaaacagc atttttgctg aaaaccaaga tgcgcaagat
     2401 aagaaaagcg aaaaccgtta atattgtgat aacggagcaa aacaatgaac gcaacatccc
     2461 aatttaccag taatttctgg aatatatata ttgcagttat tgtcttactg agctttatcg
     2521 ctttggcttg gctgctgctg tctcaaaatg ttgtcaaacg tccgaagaag ggcgaagaag
     2581 tacaaactac gggtcacgag tgggacggca ttgccgaata cgacaatccg ctgccccgct
     2641 ggtggttttg gctgtgtgtt ttgacgtggc tgttcggtat cggttatctg gttatgtatc
     2701 cgggtgtcgg cgactacaaa ggtctgctga aatggaccag ccataaccaa tatgaaaaag
     2761 aggtcaaaaa agccgatgag caatacggca aactgtatgc caagtttgcg gatatgccga
     2821 ttgaaaaagt ggcaaaagac ccacaggcca agcaaatcgc ccaaaacctg tttaacactt
     2881 attgtatcca gtgccacggc tctgatgcca aaggttctaa aggttttccg aatctgaccg
     2941 atagcgattg gttgtggggc ggcgatcccg ataaaatcca cgagaccatc gaaaaaggcc
     3001 gtgttgcgac tatgcctgcc tggggtcctg ctttgggcga agaaggcgtg aaagacgttg
     3061 cccattatgt gatgtccctt tcaaaaccca aaggtcagta tgatgaggaa cgtgccgcgc
     3121 gcggacaagc cttgttcagc ggtccgcctg ccaactgttt cacttgccac ggcgataagg
     3181 gacaaggtat ccaaggtttg ggtccgaacc tgactgatga cgtgtggttg tggggcggta
     3241 cgcaaaaatc cattatcgaa accattacca acggtcgcag cagccaaatg cccgcttggg
     3301 gacatttctt ggataaagac aaactgcata tcatgactgc ttatgtatgg ggtctttccg
     3361 ataaagacgg taaagctccg gtgaaaaaag ccgagcctgc accggcggca gaacccgcac
     3421 catctgctcc tgcaggagca gcacaagccg cttctgaagc caaacctgcc gcagcagaac
     3481 ctaaagccga ggaaaaagcc gcacctgccg ccaaagcgga tggcaaacag gtttatgaaa
     3541 ccgtttgtgc cgcctgccat ggcaatgcaa ttccaggtat tccccatgta ggcaccaaag
     3601 ccgactgggc cgaccgcatc aaaaaaggta aggacacgtt gcacaaacac gcgatcgaag
     3661 gtttcaatac gatgcccgca aaaggcggtc gcggcgattt gagcgatgat gaggtcaaag
     3721 ctgcggttga ctatatggtc aaccagtcag gcggtaagtt ctaaccgttg ttttccgact
     3781 ttgtcggatg cagaaatccg gattcatatc gaatccggat tttttatttt gaacggaaat
     3841 cctgtttttg atttatgccg tctgaaagtg gggattttga tgcttaagca gtcagaccga
     3901 ctgatatttt tgtatggttt aaagaatggt gcagttgggt gtcggacagc attgtttgat
     3961 gctttcagac ggcatatagg tttgtttctt caaaattgaa tcttttttca tatgttgcaa
     4021 aaaaattgat tttagtcata aagaattagt ctttattgtt tataatcgcg catcatcacg
     4081 atagccttaa tttcaaaagg acgattaatg gatacacaaa tcaaaactga agccggtcag
     4141 cagaataacc ggcattatct gagcgtttgg aggtggcatt tttatgccgg tttattggtt
     4201 atgcccttct tgaccctgct tgccgttaca ggtttgggta tgctgttgtt tgccaatatt
     4261 accggtaaag agggagagcg tattcacgtt ttccctcagg cagtggtgca acccctctct
     4321 gttcaggcag aagcggcacg cggtgccatt aatccggaga cttcgtccgt cgtccaatat
     4381 attgcaccgc gtgccgatga tatggttgct gtgttccgtg tcaacaatga gggtaaggca
     4441 accatggttg cggtcgatcc ttatacggca aaagtggtca acaccatgcc gcgcaatcag
     4501 ggttggtatc acactatgga tgaaatccac ggcgatatga tgctcggtgc ggcaggcgat
     4561 tatcttttgg aaacggcagc ttcactgacc attattatgg ttgtcagcgg cttgtacctt
     4621 tggtgggcga aacagcgcgg cattaaagcg atgctgctgc cgccaaaagg cagggcgcgt
     4681 tcttggtggc ggaatctgca cggcgcgttt ggaacttggg tatcgttgat tttactgttg
     4741 ttctgcctgt cgggtattgc ttgggcaggt atttggggcg gcaagttcgt gcaggcttgg
     4801 agtcagttcc cggccggcaa atggggtgtc gaaccgaacc ccgtttcagt cgtgccgacc
     4861 cacggcgagg tattgaatga cggcaaggtt aaggaagtgc cgtggatttt ggagcttacg
     4921 cctatgcctg tctcagggac gactgtgggt gaaaacggca ttaaccccag cgagccgatg
     4981 acattggaaa ccgtcgaccg tttcgcgcgg gaaatcggtt tcaaagggcg ttatcagttg
     5041 aatttgccca aaggcgagga cggggtatgg actttgtcgc aggattctat gagttatgac
     5101 atgatcagcc cgtttgccga ccgcacggta catatcgacc agtacagcgg caagattctt
     5161 gccgacatcc gttttgacga ttacaacccg ttcggcaaat ttatggcggc aagcattgcg
     5221 ctgcatatgg ggactttggg ctggtggagc gtgttggcga acgtcgtgtt ctgccttgcc
     5281 gtgattttta tcggcatcag cggctgcgtg atgtggtgga aacgccgtcc gtccggcgtg
     5341 gcgggcattg ttcctccggc gcaaaaaatc aaactgcccg tctggtgggc gatggcattg
     5401 ccgctgctgt tgattgcact gcttttcccg accgcgctgc ttgccattgc cgtgatttgg
     5461 ctgttggata ccttgctgct gtcgcggatt cctgtgttga ggaaatggtt taaatgaccc
     5521 gatgccgtct gaagcgttca gacggcattt tgtttgcggg cggcttgccc gagaagctat
     5581 ataattccgc atcactgtca ttttgaaaaa gcaagccatg ttttacctgt accaatccaa
     5641 ccgcctcgaa tcgctcgctg cactgtttgc ccgcattcaa aaagtcaaac cgctgaaatg
     5701 tgccttgcag cccgaacaga ttgttgtgca gagtcagggg atgcgccgct acctcaacac
     5761 ctgcctcgcc cgcgatttgg gcgtggcggc gaatttggcg ttcagcctgc ccgccggcct
     5821 gacgtggaag ttgatgaaaa aactgattcc cggtattccg gaactcagcc cgtttgcacc
     5881 cgaagtcatg cgctggcggc tgctggattt gttccgcagc gcagaatttc aaaacggagc
     5941 ggaatttgaa gatgtgagga atgtgctgca agactatctg ggcagcggag aatcggcgga
     6001 ttaccagctt gcgggacagc ttgcagacat attcgaccaa tacctcgtgt accgtcctca
     6061 gtggatagac gcttggcagc agggcaggat actcggtttg ggcgacgacg aaatctggca
     6121 gtccaaactg tggcgttacc tcgacgacgg caggcagagc gcgccgcacc gtgtcgcgtt
     6181 gtgggaaaaa ctgcttgccg cgttggacaa ggataagctg cccgagcgtt atttcgtgtt
     6241 cggcatttcc acgatggcgc cgatgtattt gcagcttttg cacaagctgt ccgaacattg
     6301 cgacgtgttc gtgttcgcac tcaatccgag cgggatgcat tggggcaacg tcatcgaagc
     6361 ggcgcaaatc ctcaaaggcg gcggcgatcc cgatctgacg caggcagggc atccgctgct
     6421 tgcctcattg ggcaagcagg ggcgcgactt tttcgatttt ttgaacgaaa tggaaataga
     6481 aggcgaaacg ccggtatttg aagaaggcgg acgcgatacg cttttgcacg ccctgcaaac
     6541 cgatattcaa aacctgaaaa tgccgtctga aacggtggga agcgtcaaca cgggcgacgg
     6601 ctcgatacgc atcgtctccg cacacagccc tttgcgcgaa ttgcagatac tcaaagacaa
     6661 actgttgaaa attctgcatg aacatcccga ttggcagccg catgatatcg ccgtattaac
     6721 cccgaatatc gaaccctata cgccttttat cgaagccgtg ttcggacagg cgcaacccgg
     6781 cgcgcaggca ttgccgtatt ccgtttcgga cgtgaaaatc agccgccggc aaccgctgtt
     6841 tcatgctttg tcatgcctgt tcgacttgtt ggaaagccga tttgaagtcg acaaagtgct
     6901 tgtgctttta gaaaccgcgc ccgtgttgcg ccgtttcgga ctgaccgggg acgatttacc
     6961 gcttttgcac gacatggttg ccgatttgaa cgtccgctgg ggtttggacg gagaaatgcg
     7021 cggcggcacg gatcagctgt ttacctggaa gcaggcggta gaccgtatgg tattgggctg
     7081 gatgctgccc gaaggcggca acccgatgtg gcaggatgtc agcgcgtggt atgccgacgt
     7141 gaaccaaacc gccctgttcg gacgttttgc cgccttcctc gaaaccctgt cggatattgc
     7201 ccggatatgg cggcaacctg cgacggtcgg cgaatgggtg gcgcgttgcc gggatttgct
     7261 tgaaacattg tttcaagccg ggcccgatga ccaaaaggca gtccaaaacc tcgaaaacga
     7321 atgggtcaaa tggcaggaag agagcacttt ggctgggttt ttcggacagt tgccgcaaca
     7381 aaccgtcatc cgccatatcc gccgcttcct cgacagcgaa agcgaggcag gctttttacg
     7441 cggcggcatc accttttgca gtatggtgcc gatgcggagc ctgccgttca aagtcatctg
     7501 cctgttgggt ttgaacgacg gagattttcc ccgcaatacc aaagccgccg tattcgacct
     7561 ggttgccaaa catcccgcca aaggcgaccg cgcccgccgc gacgacgacc gctacctgtt
     7621 cctcgaagcc ctcatcagcg cgcgcgaaat cctgtatttg tcctacatcg ggcgcgacat
     7681 ccgcaaagac gaagagcttg ccccgtcttc cctgttgggc gaactcatcg acacagttgc
     7741 cgccatgacc ggcacaaaca gccgccaact tgcacaaaat tggatagaac agcatccgct
     7801 gcaagccttc tcgcgccgat atttccaaga aggcggacgt tcagacggca tattcggcac
     7861 gcgtaccgac tacgccgccg cgctcggaca aacgcccgaa ccgccgcgcc cttttttcga
     7921 ccaacccgta gaaaacgccg aacccgttgc cgaaatcgga caggacgaat ttatccgctt
     7981 ctggcgcaac cccgtcaaag tatggcttca gcagcagctt gcgtggagcg aaccccatat
     8041 cggcgaagcc tgggaacctg ccgaaccctt cgatccgcaa cacgccgatc aaatcgccga
     8101 aacctacatc gaagcacggc gcgaaggaca agattttgcc caaaccgccg cccgcatcgg
     8161 ggcggaaagc ctcctgccgt cgggagagtt gggcagactt tggcagcagg acttccaaac
     8221 cgccgccaaa caaatcgaca cggcggtttt aaacagccca aaacttcctc cgttcccata
     8281 cgccataccg tcggacgggc aaatcctgaa aggcagcttg ggcaatctgt accgctgcgg
     8341 tcaggtgttt tacgcctacg gcaaacccaa tgcgccgcaa cgtgtggctt ttttgttgga
     8401 acacctgata ttttgcgccg ttatgccgtc tgaagccgaa acgcggcaaa cctttatcgt
     8461 ccaatccgga gaaacagaag tattggcgga aatcgcgcaa gacagggcat tgcagctgtt
     8521 gtcggaatgg atggcgtttt tcaatatcgg gcaaaaccgc ccgctgccgt tttttgccaa
     8581 aacctcgctt gccgccgccg aagcgtttgc ccaaaaacaa gattgggaag ccgccctgaa
     8641 aaaagcccga accgcctatt acggcagcaa agtcagcaaa gggcagaaag actataccga
     8701 agtcgccctc gtgttcggca acgcaagcca aaacccgctc gaacagcccc tgtttgaaaa
     8761 cctcgcccgc ctgctcgccg acacgcttgc cgcagcggaa aagagggaag ggaccggagc
     8821 agcataacag gatagaaaga caaatgccgt ctgaaagcgt ttaagcattt cagacggtat
     8881 tttgtttatc gtgtttaagg tgcgggatac aaagtgggcg cgccggggcc gacgggcagg
     8941 cccaaaacaa atacccaaat gcagaataag gcgatccatg caatcaaaaa gaaggcggaa
     9001 tacggcaaca tcatagaaat cagagtaccc acgcccgcat cttttttgta tttcatcacc
     9061 gtcgccataa tcagcccgaa ataactcatc atcggcgtaa taatattggt aacggaatca
     9121 ccgatgcggt aagcggcttg aatgacttcg ggcgcgtaac cggccaacat cagcataggg
     9181 acaaaaatcg gtgcggttac cgcccattgc gcggaagcgg agcctatcat cagattgata
     9241 aaagcacaaa ttaaaataaa accgataaac aacacgctgc cggccaagcc gacttctttt
     9301 aagaacaccg cccctttaac ggcaatatat tgcccaatat tcgtccaatt aaaaaatgcg
     9361 acaaactgtg cggcaaaaaa gatgatgacc aaataaagcc ccagagtact catcgattcg
     9421 gccatcgcat taacgacttc ccgttcgccg cgcaaacttc gggttatccg gccataaaca
     9481 atgcccggca gcgcaaacaa caagaaaata aaaacaacaa tcgattttaa aaacggcgaa
     9541 ccggcaacca atcctgtttc aggatgacgc aaaataccgt cggcagggac gatgctccaa
     9601 gccaataggg cggataaggc aacaaacacc acgcctgccc aaattaatcc tttatattcc
     9661 aaaggcgtga tttcattgga atgccgaatg tctttttctt cttgtgacaa atctgattga
     9721 taagggccca attgcggttc gacgattttt tcagtaacaa aataaccaat caaagcaatc
     9781 acaaacgtac tggctgccat aaaaaaccag ttggcttcag ggcctacgac gtagtcgggg
     9841 tggatgattt gcgccgcctg ttgggtgatg cctgccaaga gcggatcgat tgtgcctaag
     9901 aacagattgg ccgaataacc gcccgaaacg ccggcgaaag ccgcagccaa accggcaagc
     9961 ggatggcggc cgagcgaatg aaagatgacg gcggacaaag ggattaggac gacatagccc
    10021 aattcagaag ccgtattgga taaaatccct gtaaaaacaa ccataaaagt agtgagtttg
    10081 cgtggggatt ttgtgagcaa taagcgcatt aatgcggaaa tcaagcccga tttttccgca
    10141 atccccacgc ccaataaaga aaccaacacc gttcccaacg gcgcgaaacc ggtgaaattt
    10201 ttaacggtat gcgtcaggat tttgatcaaa ccgtcggcat cgagcaggct gacaacgtga
    10261 atcaaaccgt catcggcacg tcctttcgcc ccaacaggac gcggatcggg gacggatagt
    10321 ccgaaatacg caccgacggc agaggcaatc agcaataaca caatgaaaat aataaaaagc
    10381 gtaaccgggt gcggcaacat attgcccagc cattcgactg tgcgtaaaaa tcgtccgcta
    10441 cgacgcgcgt cggtttgact catctgcttc tccttaaaaa aatatattga gtgcattaaa
    10501 tttttgaatt ta
//
LOCUS       DAXFZM010000079        10022 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.079, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000079 DAXFZM010000000
VERSION     DAXFZM010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10022)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10022)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10022
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.079"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(331..3162)
                     /gene="lbpA"
                     /locus_tag="ACFJAG_001717"
                     /gene_synonym="tbpA"
     CDS             complement(331..3162)
                     /gene="lbpA"
                     /locus_tag="ACFJAG_001717"
                     /gene_synonym="tbpA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoferrin/transferrin-binding protein LbpA"
                     /protein_id="HFC3980960.1"
                     /translation="MNRRHTFPLTLTALAVAAAFPSYAANPETAALDAAQSQSLKEVT
                     VRAAKVGRRSKEATGLGKIVKTSETLNKEQVLGIRDLTRYDPGVAVVEQGNGASGGYS
                     IRGVDKNRVAVSVDGVAQIQAFTVQGSLSGYGGRGGSGAINEIEYENISTVEIDKGAG
                     SSDHGSGALGGAVAFRTKEAADLISDGKSWGIQAKTAYGSKNRQFMKSLGAGFSKDGW
                     EGLLIRTERQGRETRPHGDIADGVEYGIDRLDAFRQTYDIKRKTTEPFFLVEGENTLK
                     PVAKLAGYGIYLNRQLNRWVKERIEQNQPLSAEEEAQVREAQARHENLSAQAYTGGGR
                     ILPDPMDYRSGSWLAKLGYRFGGRHYVGGVFEDTKQRYDIRDMTEKQYYGTDEAEKFR
                     DKSGVYDGDDFRDGLYFVPNIEEWKGDKNLVKGIGLKYSRTKFIDEHHRRRRMGLLYR
                     YENEKYSDNWADKAVLSFDKQGVATDNNTLKLNCAVYPAVDKSCRASADKPYSYDSSD
                     RFHYREQHNVLNASFEKSLKNKWTKHHLTLGFGYDASKAISRPEQLSHNAARISESTG
                     FDEKNQDKYRLGKPEVVEGSVCGYIETLRSRKCVPRKINGSNIHISLNDRFSIGKYFD
                     FSLGGRYDRQNFTTSEELVRSGRYADRSWNSGIVFKPNRHFSVSYRASSGFRTPSFQE
                     LFGIDIYHDYPKGWQRPALKSEKAANREIGLQWKGDFGFLEISSFRNRYTDMIAVADQ
                     KTKLPDSAGRLTEIDIRDYYNAQNMSLQGINILGKIDWNGVYGKLPEGLYTTLAYNRI
                     KPKSVSNRPDLSLRSYALDAVQPSRYVLGFGYDQPEGKWGANIMLTYSKGKNPDELAY
                     LAGDQKRYSAGRVTSSWKTADVSAYLNLKKRLTLRAAIYNIGNYRYVTWESLRQTAES
                     TANRHGGDSNYGRYAAPGRNFSLALEMKF"
     gene            complement(3159..5300)
                     /locus_tag="ACFJAG_001718"
                     /pseudo
     CDS             complement(3159..5300)
                     /locus_tag="ACFJAG_001718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580820.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
     gene            complement(5453..6376)
                     /gene="era"
                     /locus_tag="ACFJAG_001719"
     CDS             complement(5453..6376)
                     /gene="era"
                     /locus_tag="ACFJAG_001719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HFC3980961.1"
                     /translation="MDIETFLAGERAAGGYRCGFVAIVGRPNVGKSTLMNHLIGQKIS
                     ITSKKAQTTRNRVTGIYTDDTAQFVFVDTPGFQTDHRNALNDRLNQNVTEALGGVDVV
                     VFVVEAMRLTDADRVVLKQLPKHTPVILVINKIDKDKAKDRYALEAFVAQVRAEFEFA
                     AAEAVSAKHGLRIANLLELLKPYLPESVPMYPEDMVTDKSARFLAMEIVREKLFRYLG
                     EELPYAMNVEVEQFEEGDGLNRIYIAVLVDKESQKAILIGKGGERLKKISTEARLDME
                     KLFDNKVFLKVWVKVKSGWADDIRFLRELGL"
     gene            complement(6423..7142)
                     /gene="rnc"
                     /locus_tag="ACFJAG_001720"
     CDS             complement(6423..7142)
                     /gene="rnc"
                     /locus_tag="ACFJAG_001720"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004525 - ribonuclease III activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HFC3980962.1"
                     /translation="MKDDVLKRQAHTAIQKKLGYAFRDMSLLRRALTHRSHHAKHNER
                     FEFVGDSILNYTVARMLFDAFPKLTEGELSRLRASLVNEGVLAEMAAEMNVGDGLYLG
                     AGELKSSGFRRPSILADAMEAMFAAVSFDADFNTAEKVVRHLFAERVRRADFQNQAKD
                     GKTALQEALQARRFALPKYRIEEQIGHANDSMFVISCDLGELGFVCRAKGTSRKAAEQ
                     EAAKEALKWLEEKLPLKKKKK"
     gene            7309..7632
                     /locus_tag="ACFJAG_001721"
     CDS             7309..7632
                     /locus_tag="ACFJAG_001721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2185 domain-containing protein"
                     /protein_id="HFC3980963.1"
                     /translation="MNAFAQALSSALDRCIATNTVAKQNRPVGFLYREAPVFENDSGW
                     RFFSGDETDEYTDDPDNFSIVSLADITKTNPETAALLSQPEGSAWELAEDGTFQTVAD
                     WQPQD"
     gene            7679..8155
                     /gene="ribH"
                     /locus_tag="ACFJAG_001722"
     CDS             7679..8155
                     /gene="ribH"
                     /locus_tag="ACFJAG_001722"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009349 - riboflavin synthase complex
                     [Evidence IEA];
                     GO_function: GO:0000906 - 6,7-dimethyl-8-ribityllumazine
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HFC3980964.1"
                     /translation="MNTIAPNLDGKHLRIGIVQARFTNEIGSQMLKVCCRTLQELGVA
                     DENITVATVPGALEIPIALMNFASSEKFDALIAIGVVIRGETYHFELVANESGAGIGR
                     VALDYNIPIANAVLTTENDAQAIERIGEKASDAAKVAVECANLVNLLLEEQFEDEE"
     gene            8233..8658
                     /gene="nusB"
                     /locus_tag="ACFJAG_001723"
     CDS             8233..8658
                     /gene="nusB"
                     /locus_tag="ACFJAG_001723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HFC3980965.1"
                     /translation="MKTARRRSRELAVQAVYQSLINRTAAPEIAKNIREMSDFAKADE
                     ELFNKLFFGTQTNAADYIQKIRPLLDRDEKDLNPIERAVLLTACHELSAMPETPYPVI
                     INEAIEVTKTFGGTDGHKFVNGILDKLAAQIRPDEPKRR"
     gene            complement(8737..9771)
                     /gene="pyrC"
                     /locus_tag="ACFJAG_001724"
     CDS             complement(8737..9771)
                     /gene="pyrC"
                     /locus_tag="ACFJAG_001724"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004151 - dihydroorotase activity
                     [Evidence IEA];
                     GO_process: GO:0019856 - pyrimidine nucleobase
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HFC3980966.1"
                     /translation="MQTLTIIRPDDMHLHLRDGDALKAVAPYTARQMGRAVIMPNLKP
                     PVVSVADALAYKARIMAALPEGSAFEPLMTLYLTDQATPELVREAKAAGIVAFKLYPA
                     GATTNSDSGVTDLFKLIPVLEEMAKQGILFLVHGEVTDPEIDIFDREAAFIGRVMKPV
                     LAQVPNLKVVFEHITTAEAARLVLEAGDNVAATVTPQHLLLNRNDLLVGGVRPHHFCL
                     PVLKRETHRQALVAAVTGEKAHKFFLGTDSAPHAKSAKENACGCAGMFSAMTAVELYA
                     EVFEKAGALDKLEAFASKNGARFYGIPENADTITLVKQSQTVPASVPYGDGELVPMRA
                     GGEIGWTVQY"
     gene            complement(9832..>10022)
                     /locus_tag="ACFJAG_001725"
     CDS             complement(9832..>10022)
                     /locus_tag="ACFJAG_001725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980967.1"
                     /translation="LRAEQSVQAPFETRQISYAWRESGSPEETVLTAQTADSPDLPVQ
                     AVLNLTHRSHNGKPLILP"
BASE COUNT         2190 a         2868 c         2439 g         2525 t
ORIGIN      
        1 ttatgccatt aaatcaataa tttctgatga attttgaaaa cttaatcccg tcattcccgc
       61 gcaggcggga acccggttca ttgagcttca gctatttaga ataaattttg aaactctaat
      121 cgcgtcattc ccacgaaagt gggaatccgg ttttttgagt ttcagtcatt tccgataaat
      181 tgccttagca ttgaatgtcc ggattcccgc ctgcgcggga atgacggcgg aaatcttgtt
      241 tatattgaat caaaaaaacc tgcaccttaa tcagttggcg gtttagtccg acttttgggg
      301 tgcagatcaa gcttccagac ggcatttcct ttaaaacttc atttcgagcg cgaggctgaa
      361 gttcctgccc ggtgcggcat accttccata gttgctgtcg ccgccgtgcc ggtttgccgt
      421 gctttccgca gtctggcgca aggattccca agtaacgtag cggtagttgc cgatattgta
      481 gatagccgcc ctcaaggtca gccgtttttt cagattcaga taagcggaaa catctgccgt
      541 tttccaagaa gacgtaaccc ttcctgccga atatcgtttt tgatcgcctg ccagataagc
      601 aagctcgtca gggtttttcc ctttggaata ggtcagcata atgtttgcgc cccatttccc
      661 ctcgggctgg tcgtatccga accccaaaac ataacgcgac ggctgtaccg catccaaagc
      721 atagctgcgg agggacaagt ccggccggtt ggataccgat ttcggtttga tacggttgta
      781 cgccaatgtg gtgtacaggc cttcgggcag tttgccgtat acgccgttcc agtcgatttt
      841 ccccaagatg ttgatgcctt gaagcgacat attttgggca ttgtaataat cgcgtatatc
      901 aatctctgtc aatcgtcctg ctgaatccgg caatttggtt ttttgatcgg caacggcaat
      961 catatcggta taacggttgc ggaaactgct gatttccaaa aagccgaaat cgcccttcca
     1021 ctgcaaaccg atttcccggt tggctgcctt ttccgatttc agggcgggac gctgccagcc
     1081 tttcggataa tcgtgataaa tgtctatccc gaaaagttct tggaaggaag gcgttctgaa
     1141 gccgctggag gcgcggtaag acacggaaaa atgccggttc ggtttgaaca cgatgccgct
     1201 gttccacgaa cggtcggcat accgcccgct gcggacgagt tcttccgacg tggtgaagtt
     1261 ttgccggtca tacctgccgc ccaagctgaa atcaaaatat ttgccgattg aaaaacggtc
     1321 gttcaaagaa atgtggatat tgctgccgtt gatttttctt ggcacgcatt tgcgggaacg
     1381 cagggtttcg atgtagccgc agaccgaccc ttcgacgact tcgggcttac ccaaacggta
     1441 cttatcttga ttcttttcat cgaatcccgt ggattccgaa atccttgccg cattgtggga
     1501 aagctgttcg gggcgggaga tcgctttgga agcatcgtaa ccgaagccca aagtcagatg
     1561 gtgtttcgtc catttgtttt tcagcgactt ctcaaacgag gcattcaaaa cattgtgctg
     1621 ttcgcggtag tggaaacggt cgctgctgtc gtaggaatac ggtttgtccg ccgacgcgcg
     1681 gcaggatttg tccacggcag gatacacggc gcaattcagc ttcagcgtgt tgttgtcggt
     1741 tgccacgccc tgtttgtcaa acgacaacac cgccttatcc gcccagttgt ccgagtattt
     1801 ctcattttca taacggtaca gcaaacccat acggcggcgg cggtgatgtt cgtcaataaa
     1861 tttggtgcgg gaatatttca aacctatgcc cttgaccaaa tttttatcgc ccttccactc
     1921 ttctatattc ggcacaaaat acaagccgtc gcggaaatcg tcgccgtcgt acaccccgct
     1981 cttgtctcta aacttttccg cctcgtccgt accgtaatac tgtttttccg tcatatcgcg
     2041 gatgtcgtaa cgctgtttgg tatcctcaaa cacgccgccg acataatgcc tgccgccgaa
     2101 gcggtagccc agcttggcaa gccaagagcc gctgcggtaa tccatcggat cgggcaatat
     2161 cctgccgccg cccgtgtagg cttgggcgga caggttttcg tggcgcgcct gcgcctcccg
     2221 cacctgcgcc tcttcttcag cacttaaagg ctgattttgt tcaatacgtt cttttaccca
     2281 gcggttgagc tggcggttca aatatatccc gtagcccgcc aattttgcca cgggcttgag
     2341 tgtattctcg ccctctacta agaaaaatgg ctctgttgtc ttgcgtttaa tatcgtatgt
     2401 ctggcggaac gcgtccaaac ggtctatgcc gtattccacc ccgtccgcaa tatcgccgtg
     2461 cgggcgcgtt tcccgccctt ggcgttcggt tcggattagc agcccttccc aaccgtcttt
     2521 gctgaacccc gcgccgagcg acttcataaa ttggcggttt ttactgccgt aagcggtttt
     2581 tgcctgtatc ccccagcttt tgccgtctga aatcaggtct gccgcctctt tggtgcggaa
     2641 ggcgaccgcg ccgccgagtg cgccgctgcc gtgatcggac gaaccggcgc ctttgtcgat
     2701 ttccaccgtg ctgatgtttt catattcgat ttcgttgatt gcgccgctgc cgccgcgtcc
     2761 gccgtatccg ctcaacgatc cctgcacggt aaacgcctgt atttgggcaa cgccgtcaac
     2821 cgaaaccgcc acacggtttt tatctacgcc gcgtatcgag tagccgccgc tcgcgccgtt
     2881 gccctgttcg acaaccgcca cgcccggatc gtagcgcgtc aggtcgcgga taccgagtac
     2941 ctgttctttg ttcaacgttt ccgacgtttt gacgattttg cccaaacctg tcgcctcttt
     3001 cgatcgccgt cccactttgg cggcacggac ggtaacctct ttcaatgatt gactttgcgc
     3061 cgcatcaagt gccgccgttt cagggtttgc cgcatatgac gggaaggcgg cggcaacagc
     3121 caaggcagtc agggtaagcg ggaatgtatg ccttctgttc attgtgttgc ctccttgtca
     3181 tcttttttcg caccgaatac cgcaccgaat ttccggtcgc tgtcgagaat gctgccgccc
     3241 aattctgccg cctgcggacc gtaaaagccg cccgttacaa gaagattgtc ggctttgaag
     3301 ctctgcggtt tggtcaaccc tgcccggaaa ggtcaatacc gttattccga gtatgcgcca
     3361 aagcgtggaa accgttaccg tcaatcacac ctttttcaat ataaaaagcg gggttcgtat
     3421 catttttttc tgtcaacgtt ccaaaaatcg atttcttgcc gaaatcaacg gtaaattctg
     3481 cttttgcccc ttgattcgca tagctgtcct tttgaatgga cgtagtgcca ggctgatcgt
     3541 ctttcttatc cggtacgccg atacgcgctt cccaagtgcc ggtataatgc gccgttccgg
     3601 tttttggaat gtcggcttcc gccgtgcgga tacctttcag gaaaaggtcg atgtccctgc
     3661 ctttaggggc ttcctgagcg ggcgggatgc cgtctgaacc gccaccgccg ccttcttccg
     3721 gcaattcttc ttcgggttct tcagcttctt cttcgatttc ttcagcttca tcagcttcag
     3781 cttcatcagc ttcttcttcg acgacttcgt cttcgccgtt atcatcttcg gaaacttcgt
     3841 cttcgctttc ttcggcgatt tcttcgtctt cgctttcttc accgttatta atacccgaat
     3901 cctcttcgtc ctgcgccttc ggtttggcgg cggggcgttc ggtttttatc cgtccgagtt
     3961 tcacataggt caaaaagtcg caacaagcac tgacggtcat tttcctgccg tcggcaagat
     4021 cgatggtttt ctctttgcta accaaaggaa tttcacgccc ttcgacaaga agtttgtcgg
     4081 gatgaccaaa atcgggcata gtggaaacct caaacgggcg gggattttca tcagccgcct
     4141 cgtcaacgga aatttttcga gaatccaaga ttttggtgtg ttttccaaac ggcataacag
     4201 gatttgtgcc tgatgtctct gttttttgtt tgcctgcgaa tacgccgaat acgccgttgt
     4261 cgttactgat aaaccgtccg gcaagctctt ctccgttatc gccgaaaaaa ccgccctcaa
     4321 gccgctgatc ggcatcggta tggaaaaaca aatattcttt atcagcgtgt ctcgtcttca
     4381 cctcggtgtt aactttggca ctgccggtaa agcggttgcc gtttaaatcg gcagtgatgt
     4441 tataaatggt cagcggtttt ttaggttcct ttggatcatt tctcttttgc acatactgat
     4501 ttttaatcag ctcgcccttt aggatttttt tgtcgaaatc aaccgtatat tcggcaggat
     4561 gtttttccct gtcgtcggca tccttagccg cataagaagt tgcaccaata tcgttaccat
     4621 aaaatgttat ataacccaaa tcgtcactgg caaccgcctt acctgtccga tgacgtttga
     4681 catcggtcat atattgccag ttgccggaat attgcaccgt tcccgcgctc ggtaaagatt
     4741 gggaaggacg ttctccggaa taatatacaa aaccgtcata accaaaacgg tgggtaaacc
     4801 gcttaccacc tgagttctgt tcgatttcat cttttccgtt tttagtatat acataaccgg
     4861 catccacaaa tttataatta tattttttat tttccttttc tgacgtccta atttctacat
     4921 cggaatcacg tttatgaatt tcgcttttaa gttgttgaag tttatttcct tttgaaccgt
     4981 ataaaaacag aacatcacct tctttaaacg acagcttttc ttctgcttgt ttgctatcgg
     5041 gaattgccgt gccatcttca cgatgaaaag cagtattccg cctcaacaac cgcattgccg
     5101 caccgacggc gggccggttg accggcgtgg tttctaccga aggctcggca ggggggggaa
     5161 gtgggaacgt ccttagactt gaaagtgacg gggtacgcgg tcggcgttga ttcgacaaca
     5221 ggctgcacgc cgaaattgcc gccgcaggat gccagcatca acggcagcaa ggcaataccg
     5281 taataattca gtttacgcat ccctatcccc cctatttaat taataataat tatcattata
     5341 ttaatatgca cagataatat caacccgttt ttaacaaaga tattcccgat tgaaacaaaa
     5401 tgccgtccga aacctgttca gacggcattt gcgtaaagtt cagcaagaaa aactacaaac
     5461 ccagctcgcg caggaagcga atgtcgtctg cccaaccgga tttgactttg acccagacct
     5521 tcaaaaatac tttgttatca aacagttttt ccatatccag ccgcgcttcg gtggaaattt
     5581 ttttcaaacg ctccccgcct ttaccgatca aaatcgcctt ttggctttct ttgtcgacca
     5641 aaacggcgat gtagatgcgg ttcaaaccgt ctccctcttc aaactgctcc acttcgacgt
     5701 tcatcgcata aggcagctcc tcgcccaaat agcggaagag tttttcacgc acgatttcca
     5761 tcgccaaaaa acgcgccgat ttgtccgtaa ccatgtcttc gggatacatc ggtacgcttt
     5821 cgggcagata cggcttgagc agctccaaca ggttggcaat ccgcaaaccg tgtttcgcac
     5881 tgaccgcctc cgccgccgca aattcaaatt cggcgcgcac ttgggcaaca aacgcctcca
     5941 gcgcgtaacg gtctttcgcc ttgtccttgt cgattttgtt gatcactaaa atgaccggcg
     6001 tgtgcttggg cagttgtttc aacacgacgc ggtcggcatc ggtaaggcgc atcgcctcca
     6061 cgacgaaaac caccacatcc acaccgccga gcgcctcggt aacattttga ttcagcctgt
     6121 cgttgagcgc gttgcggtgg tcggtttgaa agcccggcgt atcgacaaac acgaactgcg
     6181 cggtatcgtc ggtataaatc cccgttacgc ggttgcgcgt cgtctgcgcc tttttgctgg
     6241 taatactgat tttctgaccg atgagatggt tcatcagcgt tgatttgccc acgttcggac
     6301 gaccgacaat cgccacgaag ccgcaacggt atccgccggc ggcgcgttcc cctgcaagga
     6361 aggtttcaat atccatattc gctttcatat ccacatttca gacggcatat tcacgcgccg
     6421 cctcatttct ttttcttctt cagcggcagc ttctcttcca gccatttcaa agcctctttc
     6481 gccgcctcct gttccgccgc cttgcggctc gtccctttgg cacggcacac gaaacccagt
     6541 tcgcccaaat cgcaggaaat gacaaacata ctgtcgttgg catggccgat ttgctcttcg
     6601 atgcggtatt tcggcaaggc gaaacggcgc gcctgcaacg cctcctgcaa agcagttttg
     6661 ccgtcttttg cctgattttg gaaatcggcg cgccggacgc gttctgcaaa caaatggcgc
     6721 accacctttt ccgccgtgtt gaaatcggca tcgaagctga cggcggcaaa catcgcctcc
     6781 atcgcgtccg ccagtatcga aggccgtctg aagccgctgc tcttcaactc gcccgccccc
     6841 aaatacagac cgtcgccgac attcatttcc gccgccattt ccgccagcac gccctcattg
     6901 accagactcg ccctcaaccg cgacaactcg ccctcggtca acttcggaaa cgcgtcaaac
     6961 agcatccgcg ccaccgtata attcaaaatc gaatcgccga caaactcgaa ccgttcgttg
     7021 tgcttcgcat gatggctcct gtgggtcaaa gcccgccgca aaagcgacat atcgcggaac
     7081 gcgtagccta actttttctg tatcgcagta tgtgcctgcc gtttcaaaac atcgtctttc
     7141 attaccgtct tccgcaaaaa acagcccgaa tgcgtttcca tactccaaaa atacagaaac
     7201 accttaaggc tgcaaacggc gcacattgta ccaccaaacc gccgccgtct gccgacaacg
     7261 cgggaatcgt ggtaaaatcc gcaagttccc ccccaacgta ttcccgcaat gaacgcattt
     7321 gcacaagcac tttcctcggc actcgaccgc tgcatcgcca ccaacaccgt cgccaaacaa
     7381 aaccggcccg tcggcttcct ttaccgcgaa gcccccgttt ttgaaaacga cagcggctgg
     7441 cgtttcttca gcggcgacga aaccgacgaa tacaccgacg accccgacaa cttcagcatc
     7501 gtcagcctcg ccgacatcac caaaaccaac cctgaaaccg ccgcactgct ttcccaaccc
     7561 gaaggcagcg cgtgggagct tgccgaagac ggcacattcc aaaccgttgc cgactggcag
     7621 ccgcaagact gaaaccttca gacggcattc cgaaaccccg aataccaaag gacacccaat
     7681 gaacaccatc gcccccaacc tcgacggcaa acacctccgc atcggcatcg tacaggcacg
     7741 cttcaccaac gaaatcggca gccaaatgct caaagtctgc tgccgcaccc tccaagaatt
     7801 gggcgtagca gacgaaaaca tcaccgtcgc caccgtaccc ggcgcgcttg aaatccccat
     7861 cgcgctgatg aactttgcct cttccgaaaa atttgacgca ctgattgcca tcggcgtcgt
     7921 catccgtggc gaaacctacc atttcgagct ggttgccaac gaatccggcg cagggatcgg
     7981 ccgcgtcgca ctcgactaca acatcccgat tgccaacgcc gtcctgacca ccgaaaacga
     8041 cgcgcaggca attgaacgga ttggagaaaa agcctcggat gccgccaaag tcgccgtaga
     8101 atgcgccaac ctcgtcaacc ttctgctcga agaacagttt gaagacgaag aataacaaac
     8161 agggcgtaca ccgatgcgcc ctttccgttt cagacggcat accgtgccgc ccaaccgttt
     8221 caaggaaaaa tcatgaaaac agcccgccgc cgttcccgcg agcttgccgt acaagccgtt
     8281 taccaatccc ttatcaaccg caccgccgcg cccgaaattg ctaaaaacat ccgcgaaatg
     8341 tccgactttg ccaaagcgga cgaagaattg ttcaacaaac tcttcttcgg cacacaaacc
     8401 aacgcagcgg actacatcca aaaaatccgc ccgctgctcg acagggacga aaaagacctc
     8461 aaccccatcg aacgcgccgt tttgctgacc gcctgccacg agctttccgc tatgcccgaa
     8521 acgccctacc ccgtcattat caacgaagcc atcgaagtta ccaaaacctt cggcggcacg
     8581 gacgggcaca aattcgtcaa cggcatcctc gacaaactcg ccgcccaaat ccgcccagac
     8641 gagcccaaac gccgttgata ctcggaaaat ccgaatcgga aaatacacaa atgccgtctg
     8701 aaaacctttc agacggcatt ttgcttgacc gttcaatcaa tactgcaccg tccagccgat
     8761 ttcgccgccc gcgcgcatcg ggacaagttc gccgtcgccg taagggacgc ttgcgggaac
     8821 ggtttggctt tgtttgacaa gggtaatcgt gtcggcgttt tccggaatgc cgtagaacct
     8881 tgcgccgttt ttcgaggcga aggcttcgag tttgtccaac gcgcctgctt tttcaaacac
     8941 ttcggcgtaa agttcgacgg cggtcatcgc gctgaacata ccggcgcagc cgcaggcgtt
     9001 ttctttggcg gatttggcgt gcggcgcgga gtcggtgccg aggaagaatt tgtgcgcctt
     9061 ctcgccggta acggcggcga ccaatgcctg acggtgggtt tcgcgcttga ggacgggcag
     9121 gcagaaatga tgggggcgca cgccgccgac caagaggtcg ttgcggttga gcaggaggtg
     9181 ttgcggggta acggtggcgg caacgttgtc gccggcttcc aaaacgaggc gggcggcttc
     9241 ggcggtggtg atgtgttcga acacgacttt gagattcggc acttgcgcca aaacgggttt
     9301 catcacgcgc ccgataaagg cggcttcgcg gtcgaaaatg tcgatttcgg ggtcggttac
     9361 ttcgccgtga acgaggaaca ggatgccctg ttttgccatt tcttccaaca cggggatgag
     9421 cttgaacagg tcggttacgc cggaatcgga attggtggtc gcgcctgcgg ggtagagttt
     9481 gaaggcgacg atgccggcgg ctttggcttc gcgcacgagt tcgggcgtgg cttggtcggt
     9541 caggtaaagc gtcatcagcg gctcaaacgc gctgccttcg ggcaacgccg ccataatgcg
     9601 cgctttgtag gcaagcgcgt cggctacgct gacgactggc ggtttgaggt tgggcatgat
     9661 gacggcgcgc cccatctggc gggcggtata aggggcaacg gctttgagcg cgtcgccgtc
     9721 gcgcaggtgc aggtgcatat cgtcgggtcg gatgatggtc agggtttgca tggttgttcc
     9781 tttttagatt tttggtttcc agacggcatg ccgactttat gccgtctgaa gtcaggggag
     9841 aattaggggt ttcccgttat gggaacggtg cgttaggttc aatactgcct gtacgggtaa
     9901 atccggggaa tcggcggttt gtgcggtcaa tacggtttct tcagggctgc ccgattcccg
     9961 ccaggcatag ctgatttgcc tggtttcaaa cggtgcctgc accgactgtt ccgccctcaa
    10021 tt
//
LOCUS       DAXFZM010000080         9830 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.080, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000080 DAXFZM010000000
VERSION     DAXFZM010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9830)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9830)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9830
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.080"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(59..253)
                     /locus_tag="ACFJAG_001726"
     CDS             complement(59..253)
                     /locus_tag="ACFJAG_001726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbdD/YjiX family protein"
                     /protein_id="HFC3980968.1"
                     /translation="MKHKLASWWKTIKLTANLMAGVPDYENYVAQQRKHNPNAPVMNK
                     LQFQDYCRKRRCGANGGRCC"
     gene            complement(243..2324)
                     /locus_tag="ACFJAG_001727"
     CDS             complement(243..2324)
                     /locus_tag="ACFJAG_001727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009267 - cellular response to starvation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation CstA family protein"
                     /protein_id="HFC3980969.1"
                     /translation="MKSLKTFLIWGIVVLVGLASFTTLALSRGEQVSAVWMVTAAISV
                     YCIAYRFYSLYIANRVMRLDPNRLTPAERHNDGLDYVPTHKGVLFGHHFAAIAGAGPL
                     VGPVLAAQMGYLPGTLWIIFGVVFAGAVQDMTVLFVSMRRDGKSLGDIVKQELGTVPG
                     VIASIGILMIMVIIMAVLALIVVKALVHSPWGTFTIAATMPIALFMGIYTRHIRPGKI
                     GEISIVGFILLMLAVIYGEDVAKSSIGHWFDLDGIQLTWAIMIYGFVASVLPVWLLLT
                     PRDYLSAFLKIGTIAALALGIVIVNPALQMPAVTHFIDGSGPVFSGALFPFLFITIAC
                     GAVSGFHALISSGTTPKMLENETHVRMIGYGGMLMESFVAIMALAAAASLDPGVYFAM
                     NSPAALIGTDANTAAEVITTKLNFPVDAATLLHTAKEVGENTILSRTGGAPTLAVGMA
                     HIMSRLIPGEAMMAFWYHFALLFEALFILTAVDAGTRVARFMIQDLGSIFYKPFGNTD
                     SIPANLIATFFAVALWGYFLYTGVTDPLGGINSLWPLFGIANQMLAGVALIMCAVVLI
                     KMKRDRYVWVALVPAVGVLLVTCYAGLQKLFHNDPRASFLAHAGKYSDALAKNEVLAP
                     AKDIGEMAQIIFNDKINAGLTILFLSVVVTVAAYGLRTALKARKVGWPTAKEIPAVYR
                     DGKQPEEQSEA"
     gene            2847..3226
                     /locus_tag="ACFJAG_001728"
                     /pseudo
     CDS             2847..3226
                     /locus_tag="ACFJAG_001728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219055.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MliC family protein"
     gene            complement(3362..3850)
                     /locus_tag="ACFJAG_001729"
                     /pseudo
     CDS             complement(3362..3850)
                     /locus_tag="ACFJAG_001729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713843.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="contact-dependent growth inhibition system
                     immunity protein"
     gene            4182..5570
                     /locus_tag="ACFJAG_001730"
     CDS             4182..5570
                     /locus_tag="ACFJAG_001730"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HFC3980970.1"
                     /translation="MNEYSQLIKHPDISLSPISDGIGVGNPATGEISAYVRNTGSDKL
                     KNLIQKAAAAQKLWAAKTALERADILWRWYFLVKENKEALARLMTMEQGKSLTEARGE
                     IDYAASFVRWFAEEARRIDGDVLTSVKASQKLVVLKQPVGVTAAITPWNFPSAMIVKP
                     ASLTPLSAYALAVLAYEAGVPQDLLPVVSGRASEISHEFATNPTVRKISFTGSTEVGA
                     KIFAGSAADIKKLSLELGGNAPFIVFDDADLDKAVEGALASKFRNSGQTCVCTNRVYV
                     QSGIYDVFCRKLSEKAAALKLGDGLDEGLNQGPLIEEKAVEKVEQHIADALSKGAVCL
                     TGGKRSALGGTFFEPTVLSGVTAQMAVAREETFGPLCPVFRFETEAEVIEAANNTEYG
                     LAAYLFTSDTARQWRVGEVLEYGMVGINTGLISNEAAPFGGVKRSGLGREGSKYGADE
                     YLELKYLCIDAG"
     gene            5681..6466
                     /locus_tag="ACFJAG_001731"
     CDS             5681..6466
                     /locus_tag="ACFJAG_001731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimb protein"
                     /protein_id="HFC3980971.1"
                     /translation="MMENGKTFPRWRFAVKSAGWHLLISLLVAGLAALLVFKVWYPYP
                     YAELTGGLSLYQLVVAVDIVCGPLLTLILASPKKKTKARMVDFSMVGIIQLAALAYGL
                     HSVSLARPVVEAFEQDRMTIVTAAEVVVEDLHKAPEGLQSLSWFGIRRIALKEPEDAD
                     EKNKTLDLSLKGIEPSMRPDRWLPYSDKEAEKIRKHLKPLKVLADARKTTVADILKQA
                     GLAEGEELYYLPFTSSRQKEWIVITDKEGNTKGYAPIDGFIIP"
     gene            6834..8390
                     /locus_tag="ACFJAG_001732"
     CDS             6834..8390
                     /locus_tag="ACFJAG_001732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter associated domain-containing
                     protein"
                     /protein_id="HFC3980972.1"
                     /translation="MDFSWLAEPHTWIGFATLLVLEVVLGIDNLVFVAILANKVQPAR
                     RDRARITGLGLAVVIRIIMLAFMAHIITLTEPLFQIGGLAVSGKDMIMLAGGIFLLYK
                     ATTELHERLEGHNRFAVADNQKKHAPFWGVVAQILILDAVFSIDSVITAVAMVDHIVV
                     AMGAVVVAMAVMISASKLLTEFVDRHPTVVMLCLGFLLMIGFSLIAEAFHFHIPKGYL
                     YAAIGFSILIELFNQISQRNSRKNDYIGSSWRKRTAENVLGMMGIRESVLADAGGESV
                     DDAHFEENEKSMIRSVLTLAERPIMGVMIPRRDIERLDISQSREEQYAQLQNTPYSRL
                     LVVGKAGVDEPLGYINKKDLLSQLLETGGLDIQTALRQPLVLPDGTTALGALELFRQS
                     SADYALVVDEFGAVLGMVTMKDLLEAIAGEFPEEFEREEEPAVQGNPDESLTVEGALE
                     YVELASQLNLPQQEEDTDFHTVAGLIMEELQTIPDVGDFADFHGWRFEVVEKEGQRIE
                     RVKITKLPEE"
     gene            8407..9153
                     /gene="surE"
                     /locus_tag="ACFJAG_001733"
     CDS             8407..9153
                     /gene="surE"
                     /locus_tag="ACFJAG_001733"
                     /EC_number="3.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008252 - nucleotidase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HFC3980973.1"
                     /translation="MNVLISNDDGYLAEGIAILARVASEFANVRVVAPERDRSGVSNS
                     LTLDRPLQLKQAQNGFCYVNGTPTDCIHVGQFALPDFKPDVVFSGINRGANMGDDTLY
                     SGTVAAATEAYLMGMPAVAFSLNDASGRYWATAEKALWTLLAHFFKKPPSAPVLWNVN
                     IPAVAPEDVRGIKITRLGRRHHEQNIVPSRNPRGEQIYWIGPVGEVSDREEGTDFGEC
                     GAGFITVTPLQIDLTAYPDMAETAAFWHTD"
     gene            9255..>9830
                     /locus_tag="ACFJAG_001734"
     CDS             9255..>9830
                     /locus_tag="ACFJAG_001734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010791153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HFC3980974.1"
                     /translation="MLKQTTLLAACTAVAALLGGCATQQPAPVIAGNSGMQTVSSAPV
                     YNPYGATPYNAAPAANDAPYVPPVQTAPVYSPPAYVPPSAPAVSGTYVPSYAPVDINA
                     ATHTIVRGDTVYNISKRYHISQDDFRAWNGMTDNTLSIGQIVKVKPAGYAAPKTAAVE
                     SRPAVPAAAQTPVKPAAQPPVQSAPQPAAPAA"
BASE COUNT         2278 a         2532 c         2763 g         2257 t
ORIGIN      
        1 ccttattata aaaatgccgt ttgaagtggc gttcagacgg catttgtttc aagcggggct
       61 aacagcagcg tccgccgttt gcgccgcagc ggcgtttgcg gcaatagtct tgaaattgca
      121 gcttgttcat cacgggggcg ttgggattat gtttacgttg ttgtgcaacg tagttttcat
      181 aatcgggcac gcctgccatc aagtttgccg tcagcttgat ggttttccac caagacgcga
      241 gcttatgctt cactttgttc ctccggttgt ttgccgtcgc ggtacaccgc cgggatttct
      301 ttggcggtcg gccagccgac tttgcgtgct ttgagggcgg tacgcaaacc gtacgcggca
      361 acagtcacga caaccgacaa gaagaggatg gtcagaccgg cattaatctt gtcgttgaag
      421 atgatttgcg ccatttcgcc gatgtcttta gcgggcgcaa ggacttcgtt tttagccaat
      481 gcgtcgctgt atttgcctgc gtgggcaagg aagctggcgc gcgggtcgtt gtggaacagt
      541 ttttgcagac cggcgtagca ggttacaagc agtacgccga cggcaggaac gagtgccacc
      601 cagacataac ggtcgcgttt catcttaatc agcacaacgg cacacataat caaggctacg
      661 cctgccagca tttggttggc gatgccgaat aaaggccaga gcgagttgat gccgcccagc
      721 gggtcggtta cgccggtgta gaggaagtag ccccacaatg ccacggcgaa gaaggtcgca
      781 atcaggttgg cggggatgga gtcggtgttg ccgaaaggtt tgtagaagat gctgcccaag
      841 tcttgaatca taaaacgtgc gacgcgcgta ccggcatcga cggcggtcag gatgaacaag
      901 gcttcaaaca acagggcgaa gtgataccag aatgccatca tcgcctcgcc cggaatcaga
      961 cggctcataa tgtgcgccat accgactgcg agggtaggcg caccgcctgt gcgggacagg
     1021 atggtgtttt cgcccacttc cttagcggtg tgcaacaggg ttgcggcatc gacagggaag
     1081 ttcagcttgg tggtaattac ttcggcggcg gtgttggcat ccgtaccgat cagtgcggcg
     1141 gggctgttca tcgcgaaata cacgccggga tcgagcgatg cggcggcggc aagcgccata
     1201 atcgccacga aactttccat caacataccg ccgtaaccga tcatacggac gtgggtttcg
     1261 ttttccagca ttttcggcgt ggtgccggaa gaaatcagtg cgtggaagcc cgaaaccgca
     1321 ccgcaggcga tggtaatgaa caagaacggg aacaatgcgc ctgagaatac cgggcccgaa
     1381 ccgtcgataa agtgggtaac cgcaggcatt tgcaaagcgg gattgacgat gacgataccc
     1441 aaagccaagg ccgcaatcgt accgattttc aggaaggcgg agagatagtc gcgcggggtc
     1501 agcaagagcc agaccggcaa aaccgaagcc acgaaaccgt aaatcataat cgcccaagtg
     1561 agctggatgc cgtcaaggtc aaaccaatgc ccgatggagc ttttcgccac atcttcgccg
     1621 taaattaccg ccaacatcag caaaataaag ccgacgatgg aaatctcgcc gattttgccc
     1681 ggacggatat ggcgcgtgta aatacccata aacagcgcaa tcggcatcgt tgcggcaatg
     1741 gtgaacgtac cccaagggct gtgaaccaat gcttttacga caatcaacgc caaaaccgcc
     1801 ataatgatga ccataatcat caaaataccg atggaggcaa tcacgccggg gacagtgccg
     1861 agttcctgtt tcacaatatc gcccaaagac ttaccgtcgc ggcgcataga gacgaacaag
     1921 accgtcatat cctgtaccgc gccggcaaat accacgccga agataatcca caaagtaccg
     1981 ggtagataac ccatttgcgc cgccaaaacc ggaccgacca aagggcccgc gccggcaatc
     2041 gcggcaaagt ggtgtccgaa caatacgcct ttgtgcgtcg gaacgtagtc caagccgtcg
     2101 ttgtgccgct cggcgggcgt gagacggttc ggatcgagcc gcatcacgcg gttggcgatg
     2161 tagaggctgt aaaaacggta ggcgatacag taaacggata tggcggcggt aaccatccat
     2221 accgcgctga cctgttcgcc tcggctgagg gccagagtgg taaaggatgc taagccgacc
     2281 agtaccacta tgccccaaat gaggaaggtt ttgagtgatt tcatcgaata aatccttatc
     2341 tcacactgtc ggaatatgtc ggagcggaca ggcaacggtt ggctacccgt aatccgatgc
     2401 cgacacaaac cggagtttga atgattgacg aagtatgaaa cagtgcgctt gtcgggactt
     2461 gtgccttatg cccgcatcaa acagtgcagg aatgtacgcg cacaaacgtt aaacgccgaa
     2521 taggatttta acgcaaatta gcacactgat atcggttttt acttggaatt tggaaaaatt
     2581 tacattcctc cgggcgggca ggcaggttca gacggcatcg tcaggcaaaa ggcggtgtcg
     2641 gaagacgggt aaagaagggg cgcgcaatcc ggattattga tttatcgtgt ttccttttcg
     2701 gttgaacctc agccctttgg ggcggtaaaa tcagacttta tttgggaggg gcgcaacccc
     2761 ttccgaatca ggacggcaca tagggcggtg ctttaatgtg tcgtcctgtg tgttgaaaca
     2821 tattttcttt ttattgggga gcttttatga atatcaggtt tttcgcgctg accgtatcgg
     2881 ttttgtcttt ggcggcctgt gccgtgccgg aagcgtatga tggcggcgga cgcgggtata
     2941 tgccgcctgt tcaaaaccaa gccggccgga cgattttcga gcgttttcat gcgagaacgg
     3001 tttgtctgtg cgcgtccgca atttggacgg cggcaaaatc gcgttgcggc tggacggcag
     3061 gcgtgccgtc ctctcttccg acgttgccgc atccggcgaa cgctataccg ccgaacacgg
     3121 tttgttcgga aacggaaccg agtggcacca gaaaggcggc gaagcctttt tcggctttac
     3181 cgatgcctac ggcaattcgg tcgaaacttc ctgccgcgcc cgttaaacgg ggcagcctgt
     3241 ttgaaccgcc gtccggattt ttcgggcggt tttttatgcc ggttttgttt tggccgtcgg
     3301 ctggttccgg cggttttcgg gcgtggcgga ttatttttcg tttcgttctg ggtttatcct
     3361 gtcggcagcg gctcaatgcc aactttaaac ctgctccgat ttcttcaggg ctgttatcca
     3421 atgataaaat tacatcgtct gcatcaatgg catcccacgc ttccggcttg acatggcggc
     3481 tcgggctgat tttcaggcag ccgttgtgca gccaaatatc cccgctcatc atgtttttaa
     3541 atagggcgcg tctggtttta tagcccaagt tcccgcatag gttggcaacc caatcctcat
     3601 agcgttgccg aaatttttcg gtatcaaaaa aatcttggtc ttccgaactg tcataaacga
     3661 aagtcctgct gtttgccaac gcttgcaaga ccgtcgtgcc taaagtttca ttgtcggtat
     3721 ccaatggcag gatatggggg gatataggtg gtctattgcc gttaacccca aacctgaaca
     3781 tgtttgaaca atcagagctt cttcattagc ataaaaaact gcccaataat tgatcctgtt
     3841 taaaaatcat tatttaatct ccgtaatttt gactgtaatg ttttgacttt tgccatactc
     3901 taccacgcgt tgtaactgca atctttgctt cttatatatt gtaccctatc aaagggctgc
     3961 attacttttc tttctaaaga ttactatcgc ataaaaagta tttttcttaa acgacaggga
     4021 tgcgcccgtg ccatattcaa acaccgcccg gatgttgcgc tgcccgatcg gatgcttcag
     4081 acggcatcgg aagggtttgc agttttggaa tatgaagatg ataatgtccg cgagattgac
     4141 ggcatttgaa agcggttatc ccgtataccg gaggacacga aatgaacgaa tattcccaat
     4201 taatcaagca tcccgatatt tccctttccc cgatttcaga cggcatcggg gtcggcaatc
     4261 cggcgacggg cgaaatttcg gcgtatgtcc gcaacacggg ttcggacaag ctgaaaaacc
     4321 tgattcaaaa ggcggcggca gcgcaaaaat tatgggcggc gaaaaccgcc ttggaacgcg
     4381 ccgacatatt gtggcgttgg tattttttag ttaaagaaaa caaagaagca ctggcgcgtc
     4441 tcatgacgat ggagcagggc aaaagcctga ccgaggcgcg cggcgaaatc gattatgcgg
     4501 cttcgtttgt gcgctggttt gccgaagagg cgcggcggat tgacggcgat gtgctgacga
     4561 gtgtgaaagc gtcgcaaaaa ctggttgtgt tgaaacagcc cgtcggcgtt accgctgcga
     4621 ttacgccgtg gaatttcccg tccgcgatga tagtcaaacc tgcatcgctc acgcctttga
     4681 gtgcgtatgc gttggctgta ctggcctacg aagcgggcgt gccgcaggat ttgcttcccg
     4741 tcgtcagcgg ccgcgcttcg gaaatcagcc atgaatttgc cacgaacccg accgtgcgca
     4801 aaatcagctt caccggctcg accgaagtcg gcgcgaaaat ttttgccggc agcgcggcgg
     4861 acattaaaaa actcagtttg gaactgggcg gcaacgcgcc gtttatcgtg tttgacgatg
     4921 ccgatttgga caaagccgtc gaaggcgcgc tggcgagcaa gttccgcaac agcggtcaga
     4981 cctgcgtctg caccaaccgc gtttacgtcc aatcgggcat ttacgacgta ttttgccgca
     5041 aattgagtga aaaggcagcc gcgctcaaat tgggcgacgg cttggacgaa ggcctgaacc
     5101 aaggaccgct gattgaggaa aaagcggtag aaaaagtcga acagcacatc gccgacgcac
     5161 tctccaaagg cgcggtctgt ctgaccggcg gcaaacgcag cgcgttgggc ggaacgtttt
     5221 ttgagccgac tgtcttaagc ggcgttacgg cgcaaatggc ggtagctcgc gaggaaacct
     5281 tcgggccttt gtgtccggtg ttccgttttg aaaccgaagc cgaagtcatc gaggctgcga
     5341 acaatacgga atacggtttg gcagcttacc ttttcacctc cgacaccgcc cgtcaatggc
     5401 gcgtcggcga agtcttggaa tacggcatgg tcggcatcaa tacgggctta atcagtaatg
     5461 aagcggcacc gttcggcggg gtgaaacgca gcggtttggg acgtgaaggc agcaaatacg
     5521 gtgcggacga atatctggaa ttgaaatatt tgtgcattga tgccgggtga cggatgccgt
     5581 ctgaatggca gggtttcaga cggtgtcgca ttttaagcag tctctatctg ttgtacaatg
     5641 cgccctgttt ttacggttat ttttgatttg aatgtaagat atgatggaaa acggaaaaac
     5701 attcccgaga tggcgttttg ccgtgaaaag tgcgggctgg cacctcttaa tcagcctatt
     5761 ggttgcaggg ctggcggcat tgctggtttt taaggtttgg tatccttatc cttatgccga
     5821 gctgacgggc ggtctgtcgc tttatcagct ggtggtggcg gtcgatatcg tatgcggccc
     5881 gctgctgact ttaattttgg caagcccgaa gaaaaagaca aaggcacgca tggtcgattt
     5941 ttccatggtc ggcatcatcc agctggcggc tttggcgtac ggtttgcaca gcgtttcgct
     6001 ggcgcgtccc gtggtggaag cgtttgaaca ggaccgcatg accattgtta cggcggcgga
     6061 agtcgtggtc gaagatttgc acaaagcccc cgaagggctg caaagcctgt cgtggttcgg
     6121 catccgccgc attgcattga aagaacctga ggatgcggat gagaagaaca agacgctgga
     6181 tttgtccctg aaaggtatcg agccgagtat gcgtcccgac cggtggctgc cgtattccga
     6241 caaggaagca gaaaaaatcc gcaaacatct gaaaccgctg aaagtcttgg cggatgcgag
     6301 aaaaacgacg gttgcggaca ttctgaaaca ggcaggtctc gccgaagggg aggagctgta
     6361 ttacctgccg tttaccagca gcaggcagaa agagtggata gtcattaccg ataaagaggg
     6421 caacaccaaa ggctacgcgc cgatagacgg cttcatcatc ccttaaccat tgggattccg
     6481 cccgcactcg aacatccgtt cttcgcggcg gtagaatcag actgtatttg agaggggcgc
     6541 aacccctcaa tcagggcaac acatagggag acgctttatg tgccgtccgt gtattgaaac
     6601 atttcaaaat aagcccatgc cgtccgaaca tcctttcaga cggcatggcg ttttgccatt
     6661 gccccgataa gctgttaaac tgtttaaatt atttcgaccg aaggtacacg cacatgaaag
     6721 accccgagca gagcagtaag cccgcccgcc gttttttgtg cgtaccgtct gttcaggcag
     6781 cttgagcgtt tcaggctgcc tttttgcgtt tgaacttgag gaacacgaaa atcatggatt
     6841 tcagttggtt ggcagaaccg catacctgga taggttttgc cacgcttttg gtgttggaag
     6901 tcgtattggg gatagacaac cttgtctttg tggcgatttt ggcaaacaag gtccagcccg
     6961 cacggcgcga ccgcgcacgg attaccgggc tggggctggc agtcgtcatc cgcatcatta
     7021 tgcttgcttt tatggcgcat atcatcacgc tgaccgaacc gctgttccaa atcggcggcc
     7081 tcgccgtttc cggcaaggac atgattatgc tcgcgggcgg tattttcctg ctttacaaag
     7141 ccactaccga actgcacgaa cgcctcgaag ggcataaccg gtttgccgtt gccgacaacc
     7201 aaaaaaaaca cgcgccgttt tggggcgtgg tcgcgcaaat cctgatactg gatgccgtgt
     7261 tttccatcga ttcggtcatc accgccgtgg cgatggtcga tcacatcgtc gtggcgatgg
     7321 gcgcggtcgt cgtcgcaatg gctgtcatga tttccgccag caaactcttg accgaatttg
     7381 tggacaggca tcccaccgtc gtgatgctct gccttggttt tttgttgatg atcggtttca
     7441 gcctgattgc ggaagccttc catttccaca ttcccaaagg ctacctctac gccgccatcg
     7501 gcttctcgat tttaatcgaa ctgtttaacc agatttcgca acgcaacagc cgcaaaaacg
     7561 actacatcgg cagctcgtgg cgcaagcgca ccgccgaaaa cgttttgggt atgatgggca
     7621 tacgcgaaag cgtgcttgct gacgcgggcg gcgaatccgt ggatgacgcg cattttgaag
     7681 aaaacgaaaa atcgatgata cgcagcgtgc tgacgcttgc cgaacgcccg attatggggg
     7741 tgatgattcc acgccgcgac atcgaacggc tggacatttc ccaaagccgc gaagaacagt
     7801 atgcccaact gcaaaacacg ccttacagcc gcctgctcgt tgtcggaaag gcgggcgtgg
     7861 acgaaccgtt gggctacatc aacaaaaaag acctgctgtc ccaactgctg gaaacaggcg
     7921 gtctcgacat tcagacggca ttgcgccagc cgctcgtcct gcccgacggc acgaccgcct
     7981 tgggcgcgct cgaactcttc cgccaaagca gcgcggatta cgctttggtg gtggacgagt
     8041 tcggcgcggt gttgggtatg gtgacgatga aagacctgtt ggaagccatc gcaggcgagt
     8101 tccccgaaga attcgagcgc gaagaagaac ccgccgttca ggggaatccc gatgaaagcc
     8161 tgacggtgga aggcgcgttg gaatatgtgg agctggcatc ccaactcaac ctgccgcagc
     8221 aggaggaaga taccgatttc cataccgttg ccgggctgat tatggaagaa ttgcaaacca
     8281 tccccgatgt cggcgatttt gccgattttc acggctggcg gtttgaagtg gtcgaaaaag
     8341 aagggcagcg catcgagcgg gtcaaaatca ccaaattgcc cgaagaataa gcatccagga
     8401 taaaaaatga acgttttgat ttccaacgac gacggctatc tggcagaagg cattgccatt
     8461 ctggcgcggg ttgcgtcgga atttgccaat gtcagggtgg tcgcgcccga gcgggacagg
     8521 agcggggtca gcaattcgct gacgctcgac cgtcctttgc agctgaaaca ggcgcaaaac
     8581 ggcttctgct acgtcaacgg cacgccgacc gactgcatcc atgtcggcca gtttgccctg
     8641 cccgatttta agcccgatgt cgtgttttca ggtatcaacc gtggcgcaaa tatgggcgac
     8701 gatacgcttt attcggggac ggttgcggcg gcgaccgaag cctatctgat gggtatgcct
     8761 gctgtggcgt tttctttaaa cgatgcttcc ggacgctatt gggcaaccgc agaaaaggca
     8821 ctgtggacat tgttggcgca tttttttaaa aaaccgccgt ccgcgcccgt cttgtggaat
     8881 gtcaacatcc ctgctgtcgc accggaagat gtcaggggaa tcaagattac ccgtttgggc
     8941 agacggcatc atgagcagaa catcgtcccg tcccgcaatc cgcgcggcga acagatttat
     9001 tggatagggc cggtcggcga agtttccgat cgggaagagg ggacggattt tggtgaatgc
     9061 ggcgcaggtt ttattaccgt aacgccgctg caaatcgatt tgaccgccta tccggacatg
     9121 gcggagacgg cggccttttg gcatacggac tgaccgtttt tcaaataccg tcgggttttg
     9181 cgcttgagaa gaacgcgcat ttttattatg atataccgca ttcaggctat atatcggaac
     9241 atgaaggtta tcttatgttg aaacaaacga cacttttggc agcttgtacc gccgttgccg
     9301 ctctgttggg cggttgcgcc acccaacagc ctgctcctgt cattgcaggc aattcaggta
     9361 tgcagaccgt atcgtctgcg ccggtttaca atccttatgg cgcaacgccg tacaatgccg
     9421 ctcctgccgc caacgatgcg ccgtatgtgc cgcccgtgca aactgcgccg gtttattcgc
     9481 ctcctgctta tgttccgccg tctgcacctg ccgtttcggg tacatatgtt ccttcttacg
     9541 cacccgtcga catcaacgcg gcgacgcata ctattgtgcg tggcgacacg gtgtacaaca
     9601 tttccaaacg ctaccatatc tctcaagacg atttccgtgc gtggaacggc atgaccgaca
     9661 atacgttgag catcggtcag attgttaaag tcaaaccggc aggatatgcc gcaccgaaaa
     9721 ccgcagccgt agaaagcagg cccgccgtac cggctgccgc gcaaacccct gtgaaacccg
     9781 ccgcgcaacc gcccgttcag tccgcgccgc aacctgccgc gcccgctgcg
//
LOCUS       DAXFZM010000081         9778 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.081, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000081 DAXFZM010000000
VERSION     DAXFZM010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9778)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9778)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9778
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.081"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            310..873
                     /locus_tag="ACFJAG_001735"
     CDS             310..873
                     /locus_tag="ACFJAG_001735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HFC3980975.1"
                     /translation="MAIELNGNWTKGFALDHHMQKSILLGYDELGHPHFDSKRSVIGE
                     WVYQLKYRNQTQNVSLLVDYILQKFSGLESINLIVPAPFTTERINQPVQLIAKELSDR
                     LNIPYSPILRKSSSHTPLKNIEEKSEKLEILNNSITIDNIDLSNKNILVIDDLFDSGA
                     TLEISTEKLFSKNARSVIVLAMTKTRG"
     gene            876..1424
                     /locus_tag="ACFJAG_001736"
     CDS             876..1424
                     /locus_tag="ACFJAG_001736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980976.1"
                     /translation="MRTIFFSGSRSISRLNPQIRERINNILSNNFDIVIGDANGADKA
                     IQEFLQEQDYANVHIYFSGKIYRNNVGNWQFVQVDSKGTGRVFYTAKDKKMAEIADYG
                     FILWDGKSIGSLNNIAELLQLNKPSLVYHSQTKEFFKIKSSADLENILSNIEDDVLAS
                     ILEKGNTFLKSYVTKQPSLIQE"
     gene            1431..4646
                     /gene="carB"
                     /locus_tag="ACFJAG_001737"
     CDS             1431..4646
                     /gene="carB"
                     /locus_tag="ACFJAG_001737"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HFC3980977.1"
                     /translation="MPKRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKV
                     ILVNSNPATIMTDPEMADVTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDL
                     ARNGVLAKYNVELIGATEDAIDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQE
                     QVGFPTLIRPSFTMGGSGGGIAYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEM
                     EVVRDKADNCIIICSIENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIG
                     VDTGGSNVQFAVNPENGEMIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGFTLDE
                     LRNDITGGRTPASFEPSIDYVVTKIPRFAFEKFPAADDRLTTQMKSVGEVMAMGRTIQ
                     ESFQKALRGLETGLCGFNPRSEDKAEIRRELANPGPERMLFVADAFRAGFTPEEIHEI
                     CAIDPWFLAQIEDLMKEEKSVSDGQLQDLDYAALRRLKRKGFSDKRLAQLLNVSEKEV
                     REHRYALKLHPVYKRVDTCAAEFATETAYLYSTYEEECESRPSDRKKVMILGGGPNRI
                     GQGIEFDYCCVHAALALRESGFETIMVNCNPETVSTDFDTSDRLYFEPLTLEDVLEIV
                     RTENPWGVIVHYGGQTPLKLANALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLR
                     QPPNRIAHNEEEALVKAEEIGYPLVVRPSYVLGGRAMQIVHSAEQLQKYMREAVQVSE
                     DSPVLLDFFLNNAIEVDVDCVSDGKDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEE
                     IQDEIRRQTKAMAYALGVVGLMNVQFAVQDGVVFVLEVNPRASRTVPFVSKATGVPLA
                     KVGARCMAGISLKEQGVEKEVVPDFYAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGV
                     GASFGEAYYKAQLGAGERLNPTGKIFLSVREEDKERVIKTAKNFQALGYGICATRGTA
                     QYLTEHGLIVQAINKVPEGRPHIGDALKNGEIALVVNTVSSDPQSVSDSHIIRQSALQ
                     QRVPQYTTTAGGEAMSEGAKSRDYLGVYSVQELHGRLKNRN"
     gene            complement(4847..5887)
                     /gene="queA"
                     /locus_tag="ACFJAG_001738"
     CDS             complement(4847..5887)
                     /gene="queA"
                     /locus_tag="ACFJAG_001738"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HFC3980978.1"
                     /translation="MDISDFDFTLPEHLIAQHPPEVRGSSRLLVALPDMPLQDRVFGD
                     LPDYVEAGDVLVFNNTKVMKARLFGQKDSGGRIEALIERVLDNHTALAHIRSSKSPKP
                     GMGLVFEGGIRAVMVGREGELFCLRFEGGQTVYELLEQNGHLPLPPYIERAADADDDS
                     RYQTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVDKIE
                     EHKMHSEWFEVPSETVAAVEAAKARGNKAWAVGTTSMRALESAARATGYLKDGQGDTD
                     IFITPGYRFNVVDRLVTNFHLPKSTLLMLVGAFSGMGHIRAVYRHAIEREYRFFSYGD
                     AMVLGRNEGGGL"
     gene            6004..6261
                     /locus_tag="ACFJAG_001739"
     CDS             6004..6261
                     /locus_tag="ACFJAG_001739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase"
                     /protein_id="HFC3980979.1"
                     /translation="MRKIKLPAHFPQKPPFFDILLDIYRQLRENEHNFTVVSHHRKTV
                     SEHHSARFAPLPQAGCFLKNQRNNPPEHRQPLKEQKWICAN"
     gene            6243..6704
                     /gene="accB"
                     /locus_tag="ACFJAG_001740"
     CDS             6243..6704
                     /gene="accB"
                     /locus_tag="ACFJAG_001740"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HFC3980980.1"
                     /translation="MDLRKLKKLIDLVEESGIAEIEVTEGEEKVRITRTIAAAAAPVY
                     AAPVPAAAPAVTPAAAPVAASAPAAAPAARDLSDAQKSPMVGTFYRAPGPNAAAFVEV
                     GQQVKAGDTLCIIEAMKLMNEIEAEKSGTVKEILVENGTPVEFGEPLFIIG"
     gene            6818..8179
                     /gene="accC"
                     /locus_tag="ACFJAG_001741"
     CDS             6818..8179
                     /gene="accC"
                     /locus_tag="ACFJAG_001741"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0004075 - biotin carboxylase activity
                     [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HFC3980981.1"
                     /translation="MLKKVLIANRGEIALRVLRACREMGIATVAVHSEADKGSLHVKL
                     ADESVCIGPAASAQSYLNIPAIIAAAEVTFADAVHPGYGFLAENADFAEQVEQSGFTF
                     IGPKPDTIRLMGDKVSAKHAMIAAGVPCVPGSDGALPDDDAEILKIADKVGYPVIIKA
                     SGGGGGRGMRVVEKKEDLLQSVEMTKAEAGAAFGNPMVYMERYLQRPRHVEIQVLADE
                     HGNAVYLAERDCSLQRRHQKVIEEAPAPFIDEEARKKIGKACTDACKRIGYRGAGTFE
                     FLYEDGEFFFIEMNTRVQVEHPVTELITGVDIVQEQLRIASGLPLQYKQKDIKIEGHA
                     FECRINAEDPYNFIPSPGPIESCHLPGGFGIRVDSHIYQGYRIPPYYDSLIGKICVHG
                     KTREQAMAKMRVALAELAVTGIKTNTPLHRDLFADAGFQEGGVSIHYLEHWLEARKTK
                     QDK"
     gene            8283..9170
                     /gene="prmA"
                     /locus_tag="ACFJAG_001742"
     CDS             8283..9170
                     /gene="prmA"
                     /locus_tag="ACFJAG_001742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HFC3980982.1"
                     /translation="MPYQQITVNVNDAVAERLADALMEHGALSAAIEDACAGTQNEQA
                     IFGEPGMPTEQIWQQSKVIALFGEHDEAAAVIDAAAQECGLKDLAYTGETIEDQDWVR
                     LTQSQFDPIRISDRLWITPSWHEAPEGCAVNLRLDPGLAFGTGSHPTTRLCLKWLDTQ
                     LKNGESVLDYGCGSGILTIAALKLGAGSAVGVDIDEQAVRSGRDNAEQNNVDAQFFLP
                     DSLPQGQFDVVVANILANPLRMLGEMLAARTKQGGRIVLSGLLDEQAEELGGIYSQWF
                     DLDPAETDEGWARLNGVKR"
     gene            9188..9751
                     /gene="orn"
                     /locus_tag="ACFJAG_001743"
     CDS             9188..9751
                     /gene="orn"
                     /locus_tag="ACFJAG_001743"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000175 - 3'-5'-RNA exonuclease activity
                     [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligoribonuclease"
                     /protein_id="HFC3980983.1"
                     /translation="MQDKNNLCWLDMEMTGLNPETDRIIEVAMIITDSDLNVLAQSEV
                     YAIHQSDDLLDNMDEWNTATHGRTGLTQRVRESSHTEAEVEQKLLDFMSEWIPGRATP
                     MCGNSIHQDRRFMVKYMPKLENYFHYRNLDVSTLKELAKRWNPPIAKSVVKRGSHKAL
                     DDILESIEEMRHYREHFLISAPKAEAQ"
BASE COUNT         2512 a         2776 c         2475 g         2015 t
ORIGIN      
        1 ggtggtttga aaaataactt aaatttgcaa ccgttgattt caggtcgtct gaaaaaggat
       61 gcacgaaata tcaacagcgg gaatttttca ggtagccttt attgtcaagc agatggaaca
      121 aacgccgcga gcgttttttc agacaatctt tgaactcatc ggtagagtgt gtgccgcaag
      181 gcgcgcatgc ggtgggtcgg ggttacaggg aaaatgaaga acgcgtgcgt gcgtaccgca
      241 caccctacat gcgggctacg gcttgctagg attgctcgtt atacttaatt ttgacaagga
      301 gtcaatgaaa tggcgataga actaaatggt aactggacaa aaggatttgc tttagaccat
      361 catatgcaaa aaagtatttt gttaggttat gatgaattag ggcatcctca ctttgatagc
      421 aagagaagtg tgattggaga atgggtttat caattaaaat atcgtaatca aacccaaaat
      481 gtttctttgc tggtagacta tattttacaa aaatttagtg gtttagaatc tataaattta
      541 attgttcccg ccccttttac aacagagcgt attaatcaac cagttcaatt aattgccaaa
      601 gaactaagtg atcgcttgaa tattccatat tctcctattt taagaaaatc tagctcacac
      661 acaccactca aaaatattga agaaaaatca gaaaaactag aaatactgaa taattccatc
      721 acaattgaca atatagatct atccaataag aatattttag taatcgatga tttatttgat
      781 agcggagcaa cattggaaat atcaactgaa aaattgtttt caaaaaatgc tagatctgta
      841 attgttttag caatgacaaa gactagagga taaaaatgcg cactattttc ttttctggtt
      901 cacgcagcat ttcacgacta aatccacaaa tacgagaaag aattaacaat attcttagca
      961 ataattttga tattgttatt ggagatgcta atggggctga taaagctatc caagaatttc
     1021 tacaagaaca agattatgct aatgtgcata tttacttttc tggcaaaatt taccgaaata
     1081 atgtgggaaa ttggcagttt gtccaagtag acagcaaagg aactggaagg gtattttata
     1141 cagcaaaaga taagaaaatg gcagaaattg ctgattatgg ctttatttta tgggatggta
     1201 agagtattgg ttcattaaat aatatagcag aacttttaca gctaaataaa ccttctcttg
     1261 tataccattc tcaaacaaaa gaattcttta aaattaaatc aagcgcagat ttagagaata
     1321 ttttatctaa catagaagat gatgttttag cttcaatttt agaaaaggga aatacttttc
     1381 ttaaaagcta tgtaacaaaa caaccttctt taattcaaga gtaaccaccc atgcccaaac
     1441 gtaccgacct aaaatccatc cttatcatcg gcgccggccc tatcgttatc ggtcaggcct
     1501 gcgaatttga ctattcgggc gcacaggcct gcaaggcttt gcgtgaagaa ggctataaag
     1561 tcattctggt gaattccaac cccgccacga tcatgaccga ccctgaaatg gcggatgtta
     1621 cctacatcga accgattatg tggcagacgg tggagaagat tatcgccaag gagcggcccg
     1681 atgcgattct gcccacgatg ggcggtcaga ccgcgctgaa ctgtgcgctg gatttggcgc
     1741 gtaacggcgt gctggcgaaa tacaatgtcg agttaatcgg cgcaacggaa gacgcgatcg
     1801 acaaggcgga agaccgcggc cgctttaaag aagcgatgga aaaaatcggc ctctcttgcc
     1861 cgaaatcttt tgtctgccac accatgaacg aagccttggc ggcgcaagaa caggtcggct
     1921 ttccgacgct gattcgtccg tctttcacga tgggcggttc gggcggcggc attgcctaca
     1981 ataaggatga gtttttggcg atttgcgaac gcggtttcga tgcgtcgcct acgcatgagc
     2041 tgctgattga gcagtctgtg ctcggctgga aagagtacga gatggaagtg gtgcgcgata
     2101 aggcggacaa ctgcatcatc atctgttcga ttgaaaactt cgacccgatg ggcgttcata
     2161 cgggcgactc gattacggtt gcgccggcgc aaacgctgac ggacaaggaa taccaaatca
     2221 tgcgcaacgc ttcgttggcg gtattgcgcg aaatcggcgt ggacacgggc ggctcgaacg
     2281 tgcagtttgc ggtgaaccct gaaaacggcg agatgattgt gatcgagatg aacccgcgcg
     2341 tgagccgttc gtccgcgctg gcttccaaag caacgggctt cccgattgcg aaggtggcgg
     2401 cgaagctggc ggtcggcttt acgctggacg agttgcgcaa cgacatcacc ggcggccgca
     2461 cgcccgcgtc gttcgagcct tccatcgact atgtggtaac caaaatcccg cgtttcgcgt
     2521 ttgaaaaatt ccccgccgca gacgaccgcc tgaccacgca gatgaaatct gtgggcgaag
     2581 taatggcgat gggccgtacc attcaagaaa gcttccaaaa agccctgcgc ggtttggaaa
     2641 ccggcttgtg cggtttcaat ccgcgcagcg aagacaaagc ggaaatccgc cgcgaactgg
     2701 ccaaccccgg ccccgaacgt atgctgtttg tggcagacgc gttccgcgcg ggcttcacgc
     2761 cggaagaaat ccacgagatc tgcgccatcg acccttggtt cttggcgcaa atcgaagact
     2821 tgatgaagga agaaaaatcg gtttcagacg gccagttgca agatttggat tacgccgccc
     2881 tacgccgtct gaaacgcaaa ggcttctccg acaaacgttt ggcacaattg ttgaacgtaa
     2941 gcgaaaaaga agttcgcgaa caccgctacg cgctgaagct gcatccggtt tacaaacgcg
     3001 tcgatacctg cgccgccgag ttcgccaccg aaaccgccta tctttactcc acttacgaag
     3061 aagaatgcga atcccgtcct tccgaccgta aaaaagtgat gattctcggc ggcggcccga
     3121 accgcatcgg tcagggcatc gagtttgact actgctgcgt tcacgccgca ctcgccctgc
     3181 gcgaatcggg ctttgaaacg attatggtca actgcaaccc cgaaaccgtg tccaccgact
     3241 tcgacaccag cgaccgcctc tatttcgagc cgctgacatt ggaagacgtg ttggaaatcg
     3301 tccgcaccga aaacccgtgg ggcgtgattg ttcattacgg cggtcaaacc ccgctgaaac
     3361 tcgccaacgc attggttgaa aacggcgtga acatcatcgg cacatccgcc gacagcatcg
     3421 atgccgccga agaccgcgaa cgcttccaaa aagtgttgaa cgacttaggc ctgcgccaac
     3481 cgcccaaccg catcgcccac aacgaagaag aagcactcgt caaagccgaa gaaatcggtt
     3541 atccgctggt cgtgcgcccg tcttatgttt tgggcggccg cgccatgcag attgtccact
     3601 ccgccgagca gttgcaaaaa tatatgcgcg aagccgtgca ggtttccgaa gacagccccg
     3661 tgctgctcga tttcttcctc aacaacgcga ttgaagtcga tgtggactgc gtttcagacg
     3721 gcaaagatgt ggttatcggc ggcatcatgc agcacgtcga acaggcgggc atccactccg
     3781 gcgactccgg ctgctcgctg ccgccctact ccttaagcga agaaatccaa gacgaaatcc
     3841 gccgccaaac caaagcgatg gcgtacgcgc tgggcgtggt cggactgatg aacgtgcagt
     3901 ttgccgtgca ggacggcgtg gtgttcgtgt tggaagtgaa cccgcgcgcc agccgtaccg
     3961 tcccctttgt ctccaaagcc accggcgtgc cgctcgccaa agtcggcgcg cgctgcatgg
     4021 caggcatttc cctgaaagaa caaggcgtgg aaaaagaagt cgtccccgat ttctatgccg
     4081 ttaaagaagc cgtgttccca ttcatcaaat tcccgggcgt ggatacgatt ttgggtccgg
     4141 aaatgcgctc caccggcgaa gtgatgggcg tgggcgcaag tttcggcgaa gcctactaca
     4201 aagcccaact cggcgcgggc gaacgcctca acccgaccgg caaaatcttc ctctccgtgc
     4261 gcgaagaaga caaagaacgc gtcattaaaa ccgccaaaaa cttccaagcc ttaggctacg
     4321 gcatctgcgc cacgcgcggc acggcgcaat acctgaccga acacgggctg attgtgcagg
     4381 ccatcaacaa agtccccgaa ggccgcccgc acatcggcga cgcgctgaaa aacggcgaaa
     4441 tcgcactggt cgtaaatacc gtttccagcg atccgcaatc cgtgtccgac agccacatca
     4501 tccgccaaag cgcattgcag caacgcgtgc cgcaatacac caccaccgcc ggcggcgaag
     4561 cgatgagcga aggcgcgaaa agccgggatt atctgggtgt gtacagcgtt caagagctgc
     4621 acggtcgttt gaaaaaccgc aactgatgcc tgaatcaggt tgaacaatgc cgtctgaagc
     4681 cgttttgcgg tttcagacgg cattttgttg cacatagcct tcactttctt ttgaccttta
     4741 agcaccctaa tttggggcgg tggattatcc aactgccgga catccataaa aataccgccc
     4801 gaaccacggt tcagacggca tctgccttgc aacggacagc agcagtttaa agcccgcccc
     4861 cttcgttccg ccccaaaacc atcgcatctc cgtagctgaa gaaacggtat tcacgttcaa
     4921 tcgcatgacg gtacacggcg cggatatgac ccatacccga aaacgcgccg accaacatca
     4981 gcagcgtcga tttcggcaga tgaaaattgg taaccagcct gtcgacaaca ttaaaacggt
     5041 agcccggcgt gatgaaaata tcggtgtcgc cctgtccgtc tttcaaatat cccgttgcgc
     5101 gcgcggcaga ctcgagggcg cgcatggaag tcgtgccgac cgcccaggct ttgttccccc
     5161 gggcttttgc cgcctcaacg gcggcgacgg tttcagacgg cacttcaaac cattcgctgt
     5221 gcattttgtg ttcttcgatt ttatcgacgc gcacgggttg gaatgtcccc gcaccgacgt
     5281 gcagggttac ttctgcggtt accgcgcctt tgtctttcag acggcgcaaa agttcttccg
     5341 taaaatgcag gcccgccgtc ggcgcggcga ccgcgccctg atatttggca taaacagttt
     5401 gataacggct gtcgtcgtcc gcatcggcgg cacgttcgat ataaggcggc aggggcaggt
     5461 gtccgttctg ttccaaaagt tcgtaaacgg tttgaccgcc ttcaaaacgc aggcagaaca
     5521 gttcgccctc acgcccgacc atcacggcac ggataccgcc ttcaaacacc agccccatac
     5581 cgggcttggg ggacttggac gaacggatgt gcgccaatgc ggtatggttg tccaacacac
     5641 gctcaatcag ggcttcgatc ctgccgccgc tgtctttctg cccaaacagc cgcgccttca
     5701 tgactttggt gttgttgaat accaaaacgt cgcctgcctc gacataatcg ggcaaatcgc
     5761 caaacacccg gtcttgcagc ggcatatcgg gcagcgcgac caaaagccgg ctgctgccgc
     5821 gcacctcggg cggatgctgg gcaatcaggt gttcgggcag ggtaaagtca aaatctgaaa
     5881 tatccatttt tacactctcg ttcgggcaag ccgccattat acgcacttta gccctttttc
     5941 agacggcatc tttgcccgaa aaaccaacag attagaataa acactcttga ctcggggcat
     6001 cttgtgcgca aaatcaaact tcctgcacat ttcccccaaa aaccgccgtt ttttgatatt
     6061 ttactggaca tttaccgaca acttcgggaa aatgaacaca atttcacggt cgtttcccac
     6121 cacaggaaaa ccgtatccga acaccattcc gcccggtttg cgccgttgcc gcaagccggc
     6181 tgttttctga aaaaccaacg caacaacccg ccggaacacc ggcagccttt aaaggaacag
     6241 aaatggattt gcgcaaatta aaaaaactga ttgatttggt tgaagaatcg ggtatcgccg
     6301 aaatcgaagt aaccgaaggc gaggaaaaag tccgcattac ccgtaccatt gcagctgcgg
     6361 cagctcccgt ttacgccgcg cccgtacctg ccgccgcgcc ggccgtaacg ccggccgccg
     6421 cacccgttgc ggcatccgcg cccgccgccg cgccggccgc ccgcgatttg tccgacgctc
     6481 aaaaatcgcc tatggtcggc acgttctacc gcgcgcccgg cccgaatgcc gccgcatttg
     6541 tcgaagtcgg tcaacaggtc aaagccggcg acacgctgtg catcatcgaa gcgatgaagc
     6601 tgatgaacga aatcgaagcc gaaaaatccg gcacggtcaa agaaattctg gtcgaaaacg
     6661 gtacgcccgt cgaattcggc gaaccgctct tcatcatcgg ataatcctgt tttcagacgg
     6721 cataaacttc cgatgccgtc tgaaatgctt tccccccttc agcgttcccg cacccttttt
     6781 ttacggacgg gttgccggaa ccgcaggaaa ggtcatcatg ctgaaaaaag ttttaatcgc
     6841 caaccggggc gaaatcgcct tgcgcgtact ccgtgcctgc cgcgaaatgg gcattgccac
     6901 cgttgccgtg cattccgaag ccgacaaagg cagcctgcac gtcaaactcg ccgacgaatc
     6961 cgtgtgcatc ggtcctgccg cttctgcgca aagttatctg aacattcccg ccatcattgc
     7021 cgccgccgaa gtaaccttcg cggacgctgt ccacccgggc tacggcttcc ttgccgaaaa
     7081 cgccgatttc gccgaacagg tcgaacagtc cggctttacc ttcatcggcc cgaaacccga
     7141 caccatccgc ctgatgggcg acaaagtctc cgccaaacac gcgatgatag cggcaggcgt
     7201 gccctgcgtc cccggctctg acggcgcatt gcccgacgat gatgccgaaa tcctcaaaat
     7261 cgccgacaaa gtcggttatc ccgtgattat caaagcatcg ggcggcggcg gcgggcgcgg
     7321 tatgcgcgtg gtcgagaaaa aagaagacct cctccagtct gtcgaaatga ccaaggctga
     7381 agcgggcgcg gcgttcggca acccgatggt ttatatggaa cgctacctgc aacgcccgcg
     7441 ccacgtcgaa atccaagtgc ttgccgacga acacggcaac gccgtctatc ttgccgagcg
     7501 cgactgttcg ctgcaacgcc gccaccagaa agtcatcgag gaagcacccg ccccgtttat
     7561 cgatgaagag gcacgcaaaa aaatcggcaa agcctgtacc gacgcgtgca aacgcatcgg
     7621 ctaccggggc gcgggcacgt ttgaattttt atacgaagac ggcgaatttt tctttatcga
     7681 gatgaacacg cgcgttcagg tcgagcatcc ggttaccgaa ctcatcaccg gcgtggacat
     7741 cgtccaagag caactccgca tcgcatccgg cctgccgctg caatacaaac agaaagacat
     7801 caaaatcgaa ggccacgcct tcgagtgccg catcaatgcc gaagacccgt acaacttcat
     7861 ccccagcccg ggcccgattg aaagctgcca cctgcccggc ggcttcggca tccgcgtgga
     7921 cagccacatc taccaaggct accgcatccc gccgtactac gacagcctga tcggcaaaat
     7981 ctgcgtacac ggaaaaacgc gtgaacaggc aatggcgaaa atgcgcgtcg cactcgccga
     8041 gctggcggta accggcatca aaaccaatac gccgttgcac cgcgacctgt tcgccgatgc
     8101 gggtttccaa gaaggcggag tgagcatcca ttacctggag cactggctgg aagcgcgcaa
     8161 aaccaaacag gacaaataag ccgccgccga tatgccgtct gaagccgccc ttccgcgttc
     8221 agacggcatt tcccttgccc cgccgtctga aaccgatttc gatatttcca agaaagcccg
     8281 ttatgcccta ccaacaaatc accgtcaacg tcaacgatgc cgtcgccgaa cgcctcgccg
     8341 acgcgctgat ggaacacggt gcactctccg ccgccatcga agatgcctgc gccggcacgc
     8401 aaaacgaaca ggcgattttc ggcgaacccg gtatgcccac cgaacaaatc tggcagcaga
     8461 gcaaagtcat cgccctgttc ggcgaacacg acgaagccgc cgccgtcatc gatgccgccg
     8521 cacaagaatg cgggttaaaa gacttggcat acaccggcga aaccatcgaa gaccaagact
     8581 gggtgcgcct cacgcaatcg caattcgacc ccatccgaat ttccgaccgc ctgtggatta
     8641 ccccctcttg gcacgaagcc cccgaaggct gcgccgtcaa cctccgcctc gatcccggac
     8701 tcgccttcgg caccggcagc cacccgacca cgcgcctctg cctcaaatgg ctggatacgc
     8761 aactcaaaaa cggcgaaagc gtcctcgact acggctgcgg ttcgggcatc ctgaccatcg
     8821 ccgccctcaa actcggtgca ggttccgccg tcggcgtgga tattgacgaa caggccgtcc
     8881 gctccggcag ggacaacgcc gaacagaaca acgtcgatgc acaattcttc ctgcccgaca
     8941 gtctgcctca agggcaattc gacgtagttg tcgccaacat cctcgccaac cctttgcgta
     9001 tgctcggcga aatgcttgca gcccgcacca aacagggcgg acgcatcgtg ttgtccggtt
     9061 tgttggatga acaggccgaa gaactcggcg gcatttacag ccaatggttc gatctcgacc
     9121 cggcggaaac tgacgaaggc tgggcgcgct tgaacggcgt aaaacgctga aacggaaagg
     9181 aaacaccgtg caggacaaaa acaacctctg ctggctcgat atggaaatga cggggctgaa
     9241 tcccgaaacc gaccgcatta tcgaagtcgc gatgattatt accgactcgg atttgaatgt
     9301 gttggcgcaa tccgaagttt acgccatcca ccaaagcgac gatctgctcg acaatatgga
     9361 cgagtggaac accgccacac acggcaggac ggggctgacg cagcgcgtgc gcgaatcgtc
     9421 gcataccgaa gccgaagtcg aacagaaact gctggacttt atgtcggaat ggatacccgg
     9481 acgcgccaca ccgatgtgcg gcaactccat ccaccaagac cggcgtttta tggtcaaata
     9541 tatgccgaaa ctggaaaact acttccacta ccgcaacctc gacgtttcca cgctgaaaga
     9601 actcgccaaa cgctggaatc cgcccattgc caaaagcgtc gtcaaacgcg gttcgcacaa
     9661 ggcattggac gacattttgg agagcatcga agaaatgcgc cactaccgcg aacacttcct
     9721 gatttccgcc ccgaaagccg aagcgcaata agaaacaaac aatgccgtct gaaacgct
//
LOCUS       DAXFZM010000082         9689 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.082, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000082 DAXFZM010000000
VERSION     DAXFZM010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9689)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9689)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9689
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.082"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..263
                     /locus_tag="ACFJAG_001744"
     CDS             <1..263
                     /locus_tag="ACFJAG_001744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="opacity family porin"
                     /protein_id="HFC3980984.1"
                     /translation="QETEIITTYPSDGGGKVSLPSKMPPKPAHHQSNSIRRVGLGVIA
                     GVGFDITPNLTLDAGYRYHNWGRLENTRFKTHEASLGVRYRF"
     gene            277..450
                     /locus_tag="ACFJAG_001745"
     CDS             277..450
                     /locus_tag="ACFJAG_001745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003700871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980985.1"
                     /translation="MPSEPSDGIFDAPAVYRHGAGAGKYPYRHCRYTVTLKPAIPAQA
                     GIRTPDAAGIYRK"
     gene            802..1292
                     /locus_tag="ACFJAG_001746"
                     /pseudo
     CDS             802..1292
                     /locus_tag="ACFJAG_001746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581013.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            1329..1595
                     /locus_tag="ACFJAG_001747"
                     /pseudo
     CDS             1329..1595
                     /locus_tag="ACFJAG_001747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            2097..2720
                     /locus_tag="ACFJAG_001748"
     CDS             2097..2720
                     /locus_tag="ACFJAG_001748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HFC3980986.1"
                     /translation="MKKPTDTLPVNLQRRRLLCAAGALLISPLAHAGAQREETLADDV
                     ASVMRSSVGSVNPPRLVFDNPKEGERWLSAMSARLARFVPDEGERRRLLVNIQYESSR
                     AGLDTQIVLGLIEVESAFRQYAISGVGARGLMQVMPFWKNYIGKPAHNLFDIRTNLRY
                     GCTILRHYRNLEKGDIVRALARFNGSLGSNKYPNAVLGAWRNRWQWR"
     gene            2832..4214
                     /locus_tag="ACFJAG_001749"
     CDS             2832..4214
                     /locus_tag="ACFJAG_001749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HFC3980987.1"
                     /translation="MARDNRIQMFPHEWRASTTLSGVYALRMLGMFLVLPVLAIYAAS
                     LPGAEDNKTLVGLAMGIYGLTQALLQLPLGIASDKFGRKKTIYVGLVVFAAGSFLAAA
                     ADTLPMLVAARAIQGAGAVSAAVTALLADLTRDGVRTRAMAMIGLSIGLTFSVSLVVA
                     PMIADVAGVRGLFMLTGILTVISIGVVAWMTPDPEVSKLHEDTQAQPSRIGEVLKNRR
                     LLTLDFGIFALHAAQMALFTALPFAMTRLGLEKIQHWKVYLPSTITGLVVMVPLIIVG
                     ETRNKLKQVFVLGIVCIAAAQLGLLSGMHSIWLITAYLVVYFIGFNVLEASLPSMVSK
                     IAPSDLKGTAMGVYNTMQSLGLFAGGAAGGLLFQKYGFAGVFAFCSILMLLWLVIAVL
                     SPAPKPVKNLSYPVGGVWQGNRDGLQRALLQLEGVEDIGFSFDGQTVYLKVLQKGFDQ
                     AAAEKIITGV"
     gene            4218..4742
                     /gene="ssb"
                     /locus_tag="ACFJAG_001750"
     CDS             4218..4742
                     /gene="ssb"
                     /locus_tag="ACFJAG_001750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HFC3980988.1"
                     /translation="MSLNKVILIGRLGRDPEVRYMPNGEAVCNFSVATSETWNDRNGQ
                     RVERTEWHNITMYRKLAEIAGQYLKKGGLVYLEGRIQSRKYQGKDGIERTAYDIVANE
                     MKMLGGRNENSGGAPYDEGYGQNQEAYQRPAQQSRQPAPDAPSHPQEAPAAPRRQPVP
                     AAAPVEDIDDDIPF"
     gene            5115..6038
                     /locus_tag="ACFJAG_001751"
     CDS             5115..6038
                     /locus_tag="ACFJAG_001751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HFC3980989.1"
                     /translation="MENQRPLLGFALALLAAMTWGMLPIAVRQVLKFVDAPTLVWVRF
                     TVAAAVLFVLLTLGGRLPKRRDFSWHSFRLLLLGVTGISANFVLIAQGLHYISPTTTQ
                     VLWQISPFTMIVVGVLVFKDRMTAAQKIGLVLLLVGLLMFFNDKFGELSGLGAYAKGV
                     LLCAAGSMAWVCYAVAQKLLSAQFGPQQILLLIYAASAAVFLPFAEPAHIGSLDGTLA
                     WVCFVYCCLNTLIGYGSFGEALKHWEASKVSAVTTLLPVFTVIFSLLGHYVMPDTFAA
                     PDMNGLGYVGALVVVGGAVTAAVGDRPFKRR"
     gene            complement(6103..7491)
                     /gene="fumC"
                     /locus_tag="ACFJAG_001752"
     CDS             complement(6103..7491)
                     /gene="fumC"
                     /locus_tag="ACFJAG_001752"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045239 - tricarboxylic acid cycle
                     heteromeric enzyme complex [Evidence IEA];
                     GO_function: GO:0004333 - fumarate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006106 - fumarate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HFC3980990.1"
                     /translation="MNTRTEHDTMGNVEVPSEAYWGAQTQRSRNNFKIGGETLPQPLI
                     YALALVKKAAAATNVSLGRIKPEQADLITQAADDVLNGRLDGQFPLVVWQTGSGTQSN
                     MNMNEVLANRANEIAGTGLAAYRPVHPNDHVNHAQSTNDAFPTAIHVAAAIEINRHLI
                     PAVKALRDTLDKKAQAFAPIVKIGRTHLQDATPLTLGQEFSGYVSQLDHSLGRLNDAL
                     KGLYELALGGTAVGTGLNSHPEYAEIAAAKLAELSGLPFVSAPNKFEALGGRDAAVAA
                     SGALKTLAASLNKIANDIRWLASGPRCGLGEIKMPENEPGSSIMPGKVNPTQCEAMTM
                     VCCQVFGNDVTIGMAGASGNFELNVYMPVIAYNLLQSIRLLGDACNSFNENCAAGIEP
                     VPEKIDYFLHHSLMLVTALNRKIGYENAAKVAKTAYKNDKSLRETAVGLGLLTGEEFD
                     ELVVPADMVHPR"
     gene            complement(7635..9614)
                     /gene="tkt"
                     /locus_tag="ACFJAG_001753"
     CDS             complement(7635..9614)
                     /gene="tkt"
                     /locus_tag="ACFJAG_001753"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004802 - transketolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HFC3980991.1"
                     /translation="MSQLANVIRFLSADAVQKANSGHPGAPMGMAEMAETLWTKFLNH
                     NPANPKFYNRDRFVLSNGHASMLLYSLLHLTGYNLSIEDLKNFRQLHSKTPGHPEYGY
                     TDGVETTTGPLGQGIANAVGMALAEKILAAEFNKDGLNIVDHYTYVFMGDGCLMEGVS
                     HEACSLAGTLGLGKLIVLYDDNNISIDGKVDGWFTENIPQRFESYGWHVVPNVNGHDT
                     AAIQTAIEAARAETGKPSIICCKTLIGKGSANKEGSHKTHGAPLGADEIEATRKHLGW
                     AYPAFEIPQEIYDAWNAKEKGAKLEAGWNELFAQYQAKYPAEAAEFVRRMDKKLPENF
                     DEYVQTALKEVCAKAETVATRKASQNSIEILAKELPELVGGSADLTPSNLTDWSNSVS
                     VTRDKGGNYIHYGVREFGMGAIMNGLVLHGGVKPFGATFLMFSEYERNALRMAALMKI
                     NPVFVFTHDSIGLGEDGPTHQPIEQTATLRLIPNMDVWRPCDTAESLVAWAEAAKAED
                     HPSCLIFSRQNLKFQARSEQQLNDIKRGAYVISEAQGNAQAVIIATGSEVGLAVEAQK
                     VLAGQGIAVRVVSMPSTSVFDRQDAAYQAAVLPEGLPRIAVEAGHTNGWYKYVGLNGA
                     VVGINRFGESAPADLLFKAFGFTVDNVVDTVKSVL"
BASE COUNT         1982 a         2504 c         2871 g         2332 t
ORIGIN      
        1 aacaagaaac tgagattatt accacttacc caagcgacgg tggtgggaaa gtttctcttc
       61 catcaaaaat gccccccaaa cctgcccatc accaaagcaa cagcatccgc cgcgtgggtc
      121 tcggtgtcat cgccggtgtc ggtttcgaca tcacgcccaa cctgaccctg gacgccggct
      181 accgctacca caactgggga cgcttggaaa acacccgctt caaaacccac gaagcctcgt
      241 tgggcgtgcg ctaccgcttc tgattcgccg attccgatgc cgtctgaacc ttcagacggc
      301 atttttgacg cgcccgccgt ttacaggcac ggggcaggtg cggggaaata cccgtaccgc
      361 cattgccgat acaccgtaac cctaaaaccc gccattcccg cgcaggcggg aatccggacc
      421 cccgacgcgg cgggaatcta tcggaaatga ctgaaacccc gagattctag attcccactt
      481 ccgtgggaat gacggttcgg ttgcgttccg acaacaccgt agtctcgaaa cccgtccgac
      541 aacaccgcaa tctcgaaacc cgtcattccc gcgcaggcgg gaatccggac ctgtccgcac
      601 ggaaacttat cggataaaac ggttgcccaa accccgcgtc ctagattccc acttccgtgg
      661 gaatgacggt tcagcaagcg taggccggat acttgtatcc gacaaaacct ttaacattcc
      721 catcattgca atccattgca gcaatgtcca aaatgtcgaa ttcaagaatc cggcctacaa
      781 aatcattccg agcataatac tatgaaatac cgtcgttttt accgcaatgg cggcacttac
      841 ttttttacgg ttgtaaccaa taaacggcag aagattttga ccgatgatgc ggtgcgtttg
      901 gctttacggc aggcggtaat ggcggtgcgc gaacggtatc cgtttgaaat tttggcatgg
      961 gtgttgatgc ccgatcatct gcataccata tggcggctgc cggacaatga ttctgcttat
     1021 tcggaacgct ggcggcaaat caagcggcac agccaatatt taatcggcgg caatctcagg
     1081 ctttggcaaa acgcttttgg gaacatacta tccgcggtga ggccgatttt gcctgccatt
     1141 ttgattatct gcatttcaat ccggtcaaac atggctatgt aggacaaatt tccgattggc
     1201 ggttttctac gtttcaccgt tatgtcaaac agggtattta tccgcataat tggggtggcg
     1261 gcaatgcgga cttttctatt gaatacgatt gaagtaatgt cggattcgag aatccgacct
     1321 acggaaaact gaaagagcat cggctgctgg acggcattat gcgcaaagcc cgccgcaacc
     1381 gcccgctgcc ggaggcgcaa accaaacgca accgatattt gtcgaagacc cgttatgtgg
     1441 tcgaacaaag cttcggtacg ctgcaccgta aattccgcta tgcgcgggca gcctatttcg
     1501 gactgattaa agtgagtgcg caaagccacc tgaaggcgat gtgtttgaac ctgttgaaag
     1561 cggccaacag gctaagtgcg cccgctgccg cctaaaaggc ggcccggatg cctgattatc
     1621 gggtattcaa gggggattaa gggggtattt gggtagagtt aggagtgatt ggtggcggaa
     1681 acagccgaaa atctgtgtca gggtttcagc tgtcgggagg gaagggaatt ttgcaaaggt
     1741 ctcaagatat agtggattaa atttaaatta gtacggcaag gcgaggcaac gccgtaccgg
     1801 tttaaattta atccactata tttccgcctg ctgccgcccg aaaagcgtaa tgcgctgatg
     1861 gtgctgctgc acaatccgga cgacggataa ccggtgaaaa cgggaaatgc ccgggcggtg
     1921 tcgtctgtgc ctgtttggac aagcgttctt gagggcggta aaatcaaggt ttgcccgaaa
     1981 agggcagggc gatatgccgc gcttggattt tgcgcgcggt ttttcgcgtt ggaagcaatc
     2041 atgtctgttt gaatatttaa tgccgtctga aacgtccgga cgcacccccg ttccttatga
     2101 aaaaaccgac cgatacccta cccgtcaatc tgcaacgccg ccgcctgctg tgtgccgccg
     2161 gcgcgctgtt gatcagcccg ctggcgcacg ccggcgcgca acgtgaagaa acgcttgccg
     2221 acgatgtggc ttccgtgatg aggagttctg tcggcagcgt caatccgccg aggctggtgt
     2281 tcgacaatcc gaaagagggc gaacgttggt tgtccgcgat gtcggcacgt ttggcaagat
     2341 tcgtccccga cgagggggag cggcgcaggc tgctggtcaa tatccaatac gaaagcagcc
     2401 gggccggttt ggatacgcag attgtgttgg ggctgattga agtggaaagc gcgttccggc
     2461 agtatgcgat aagcggggtc ggcgcgcgcg gcctgatgca ggttatgccg ttttggaaaa
     2521 actacatcgg caaaccggcg cacaacctgt tcgatatccg taccaacctg cgttacggct
     2581 gcaccatcct gcgccattac cgaaaccttg aaaagggcga catcgtccgc gcgcttgccc
     2641 gcttcaacgg cagcctcggc agcaataaat atccgaacgc cgttttgggc gcgtggcgca
     2701 accgctggca gtggcgttga ttttgaaccc gtgccgcaac cgaaatacgg cgaatcctgt
     2761 ataatccgaa aatctgttca ctggaagttc agacggcatt gcaactgttg atgccgtctg
     2821 aaaaattatt tatggcaaga gacaaccgca tccaaatgtt tccgcacgaa tggcgcgcca
     2881 gtacgacgct ttccggcgtg tacgcgctgc gtatgctggg tatgttcctc gtgctgcccg
     2941 ttttggcaat atatgccgcc tcgctgcccg gtgcggaaga caataaaacg ctggtcgggc
     3001 tggcaatggg catttacggg ctgacgcagg cattgctgca actgcctttg ggtatcgctt
     3061 ccgacaagtt cgggcgcaag aaaaccattt atgtcgggct ggtcgtgttt gccgccggca
     3121 gcttccttgc cgccgccgcc gatacgctgc ccatgctggt tgccgcgcgc gccatacagg
     3181 gcgcgggggc ggtcagtgct gccgtaaccg cgctgcttgc cgacttgacg cgcgacggcg
     3241 tgcgtacccg cgcgatggcg atgatcggtt tgagtatcgg tctgacgttt tcggtcagcc
     3301 tggtggttgc gccgatgatt gccgatgtgg ccggcgttcg cggactgttt atgctgaccg
     3361 gcattctgac cgtcatcagc atcggcgtag tggcgtggat gactcctgat cccgaagttt
     3421 ccaagctgca tgaggacacg caggcgcagc cttcgcgcat aggagaagtt ttgaaaaacc
     3481 gtaggctgct gacgctcgat ttcggcattt tcgccctgca cgccgcgcaa atggcattgt
     3541 ttaccgcgct gcctttcgcg atgacccggc tcggtttgga aaaaatccag cattggaaag
     3601 tatatctgcc ctcgaccatt acgggcttgg tggtgatggt tccgctgatt atcgtcggcg
     3661 aaacgcgcaa caagctcaaa caggtttttg ttttgggcat cgtctgcatc gcggcggcgc
     3721 agcttggttt gctgtccgga atgcactcga tttggctgat taccgcttat ctggttgttt
     3781 actttatcgg ttttaatgtg ttggaagcga gcctgccgtc tatggtttcc aaaatcgcgc
     3841 cgtccgacct gaagggtacg gcgatgggcg tgtacaacac gatgcagtcg ctcggactgt
     3901 ttgccggcgg cgcggcagga ggcttgctgt ttcaaaaata cggctttgcc ggcgtgtttg
     3961 ccttttgcag catattgatg ctgctgtggc tggtgattgc cgttttatcg cccgcgccca
     4021 agcccgtcaa aaacctcagt taccctgtcg gcggcgtgtg gcagggcaat cgggacggtt
     4081 tgcaacgcgc cctgttgcag ttggaaggcg tggaagacat cggtttcagt ttcgacgggc
     4141 agaccgtcta tcttaaagtg ttgcagaagg gtttcgatca ggctgccgct gaaaaaatca
     4201 ttacaggagt ttaaaaaatg tcattgaaca aagtcatcct tatcggccgc ctcggacgcg
     4261 atcccgaagt gcgctatatg cccaacggcg aggcagtgtg taatttcagc gtcgccacca
     4321 gcgaaacttg gaacgaccgc aacggccagc gcgtagagcg caccgaatgg cacaacatca
     4381 cgatgtaccg caaactggcg gaaattgccg ggcaatacct caaaaaaggc gggctggttt
     4441 atctggaagg cagaatccaa agccgcaaat accaaggcaa agacggcatc gaacgcaccg
     4501 cttacgatat tgtcgccaat gaaatgaaaa tgttgggcgg gcgcaatgaa aacagcggcg
     4561 gcgcgcctta cgatgaaggt tacggtcaga atcaggaggc ttaccaacgc cccgctcagc
     4621 aaagtcggca gcccgctccc gacgcgccgt cccatcccca agaagcaccc gccgcgccgc
     4681 gccgccaacc cgtgccggcc gccgccccgg tcgaggacat tgacgacgac atcccgttct
     4741 gaattttacg gccggacatc ctcgcggagg gaagtcataa aggacggaaa aaccttaaac
     4801 cttacggggc aaggtttctc ttttttgcat ttgggccggc ttgttgccgc cccctgcgtt
     4861 gggcgtaacg ttgcgattgc gccgttcggg cgttttgagg caagcgatgc ctgccgcact
     4921 cccccgctgt tttcagacgg cattttaaaa ttgaggcggt gttttcaaat agtgcgaagc
     4981 aatagtcggg cttcagccag tttgtttgaa atcaaagggt tggaatcaaa cgccaaacgc
     5041 ttgaaccatc attgcccgat gcggcaaacc ggcatcgtcc ggcaatacgg ttgtttaaaa
     5101 atagggaaat caggatggaa aaccaaaggc cgctcctagg cttcgcgttg gcacttttgg
     5161 cggcgatgac gtgggggatg ctgccgattg ccgtgcggca ggtattgaag tttgtcgatg
     5221 cgccgacgct ggtgtgggtg cgttttacag tggcggcggc ggtattgttt gttttgctga
     5281 cattgggcgg gcggctgccg aagcggcggg atttttcttg gcattcattc aggctgctgc
     5341 tgctcggcgt gacgggcatt tcggcaaact ttgtgctgat tgcccaaggg ctgcattata
     5401 tttcgccgac cacgacgcag gttttgtggc agatttcgcc gtttacgatg attgttgtcg
     5461 gcgtgttggt gtttaaagac cggatgactg ccgcgcagaa aatcggtttg gttttgctgc
     5521 ttgtcggttt gcttatgttt tttaacgaca aattcggcga gttgtcgggt ttgggcgcgt
     5581 atgcgaaggg cgtgttgctg tgtgcggcag gcagtatggc ctgggtgtgt tatgccgtgg
     5641 cgcaaaagct gctgtcggcg caattcggtc cgcaacagat tctgctgttg atttatgcgg
     5701 caagtgccgc cgtgttcctg ccgtttgccg aaccggcaca catcggaagt ttggacggta
     5761 cgttggcgtg ggtttgtttt gtgtattgct gcttgaatac gttaatcggt tacggctcgt
     5821 tcggcgaggc gttgaaacat tgggaggctt ccaaagtcag cgcggtaaca accttgctcc
     5881 ccgtgtttac cgtaatattt tctttgctcg ggcattatgt gatgcctgat acttttgccg
     5941 cgccggatat gaacggtttg ggttatgtcg gcgcactggt cgtggtcggg ggtgcggtta
     6001 cggcggcggt gggggacagg ccgttcaaac gccgctagtt cgcaggcaac ggaaaatgcc
     6061 gtctgaacga ggcttcagac ggcattttat ttgagggaag gattagcgcg gatgaaccat
     6121 atcggcaggg acgaccagtt cgtcaaactc ttcgcccgtc agcaagccca acccaacggc
     6181 agtttcgcgc agcgatttat cgtttttgta ggcggttttg gcgactttgg cggcgttttc
     6241 gtagccgatt ttgcggttta acgcagtaac cagcatcagg gaatggtgca ggaaatagtc
     6301 gattttttcc ggtacgggtt cgatgccggc ggcgcagttt tcgttgaagc tgttgcacgc
     6361 gtcgcccaag aggcggatgg attgcaagag gttgtaggcg atgacgggca tatagacgtt
     6421 cagctcgaaa ttgcccgacg cgcccgccat accgatggta acgtcgttgc cgaacacttg
     6481 gcagcacacc atcgtcatcg cttcgcattg ggtcgggttg actttgcccg gcataatgga
     6541 cgaacccggt tcgttttcgg gcattttgat ttcgcccaag ccgcagcgcg ggccgcttgc
     6601 cagccagcgg atgtcgttgg cgattttgtt caggcttgcc gccagcgttt tcaatgcgcc
     6661 cgaagcggca acggcggcat cgcgtccgcc caaggcttca aatttgttcg gcgcgctgac
     6721 aaacggcagg ccggacagtt cggcgagttt ggcggcggct atttcagcgt attcgggatg
     6781 gctgttcaaa cccgtaccga ccgccgttcc acccaaggcg agttcgtaca aacctttgag
     6841 cgcgtcgttc agacggccta agctgtggtc gagttgggaa acgtagccgg aaaattcttg
     6901 tcccaaagtc agcggcgtcg catcctgcaa gtgggtacgg ccgattttga cgatgggggc
     6961 gaaggcttgg gcttttttgt ccaatgtatc gcgcaaggct tttaccgccg gaataaggtg
     7021 gcggttgatt tcaatcgcgg cggcgacgtg gatggcggtc gggaacgcgt cgttggtcga
     7081 ttgcgcgtgg ttcacatggt cgttggggtg gacgggccgg tacgccgcca aacccgtacc
     7141 tgcaatttcg ttggcgcggt ttgccagcac ttcgttcatg ttcatattgg actgcgtacc
     7201 ggagccggtc tgccaaacca ctaaggggaa ctgcccgtcg agcctgccgt tcagtacatc
     7261 atccgccgcc tgcgtaatca aatccgcctg ttcgggctta atcctgccga gggaaacatt
     7321 ggtcgcggcg gcggcttttt tcaccaacgc caaagcgtaa atcagcggct gcggcagggt
     7381 ttcgccgccg attttgaaat tgttgcggct gcgctgggtc tgcgcgcccc aataggcttc
     7441 ggacgggact tcgacattgc ccatcgtgtc gtgttcggtg cgggtgttca tacgtttctc
     7501 cttttgaaat gtgaataaga gtgattcgca aatattataa tggagattgg cggaatgagg
     7561 aagcatcaag gcgggagggc aaaaaaatgc cgtctgaaaa gcattcagac ggcatttgat
     7621 gcggcggctg aggtttacag cacggatttc accgtatcaa ccacattgtc cacggtaaag
     7681 ccgaatgctt tgaacagcag atcggcaggg gcggattcgc cgaagcggtt gatgccgacg
     7741 actgcgccgt tcagtccgac atatttgtac cagccgttgg tgtgtccggc ttctacggcg
     7801 atgcgcggca ggccttccgg taggacggcg gcttgatagg cggcgtcttg gcggtcgaag
     7861 acgctggtgg acggcatgga aacgacgcgc acggcaatac cttgtcctgc caatactttt
     7921 tgcgcttcta cagccaatcc tacctcggaa ccggtggcaa tgatgacggc ttgggcgttg
     7981 ccttgggctt cactgattac gtaagcaccg cgtttgatgt cgttcagttg ttgctcgctg
     8041 cgtgcttgga atttcaggtt ttgacggctg aaaatcaggc aggacgggtg gtcttcggct
     8101 tttgccgctt ctgcccaagc gaccagagat tctgcggtgt cgcacggccg ccatacgtcc
     8161 atattcggaa tcaggcgcag ggtggcggtt tgctcgatag gctggtgggt tgggccgtcc
     8221 tcgcccaaac cgatggaatc gtgggtgaat acgaagacgg ggttgatttt catcagtgcc
     8281 gccatgcgta aggcgttgcg ttcgtattcg ctgaacatca ggaaagtcgc gccgaagggt
     8341 tttacaccgc cgtgcaatac caaaccgttc ataatcgcac ccataccgaa ctcgcgcacg
     8401 ccgtagtgga tgtagttgcc gcctttgtcg cgggtaacgg agacgctgtt tgaccagtcg
     8461 gtcaggttgg acggggtcag gtcggcagaa ccgcccacca gttcgggcag ctcttttgcc
     8521 aagatttcga tgctgttttg gctggctttg cgggtggcga cggtttccgc tttggcgcac
     8581 acttctttca atgccgtctg aacgtactcg tcaaagtttt ccggcagctt tttatccatg
     8641 cggcgcacga attctgcggc ttcggcagga tatttggctt gatattgcgc gaacagttcg
     8701 ttccatccgg cttccagttt cgcgcctttt tctttggcat tccacgcatc gtaaatttct
     8761 tgcgggattt caaacgcagg ataagcccaa cccaaatgtt tgcgcgtggc ttcgatttcg
     8821 tccgcaccca aaggcgcgcc gtgggttttg tggctgcctt ctttgttggc gctgcctttg
     8881 ccgattaagg ttttgcagca gatgatggac ggcttgccgg tttcggcgcg ggcggcttcg
     8941 atggccgtct gaatggcggc ggtgtcgtgg ccgtttacgt tgggaacgac gtgccagccg
     9001 tagctttcaa agcgttgcgg gatgttttcg gtaaaccagc cgtccacttt gccgtcgatg
     9061 gagatattgt tatcgtcata caaaacaatc agtttgccca agcccaaggt gccggcgagt
     9121 gagcaggctt cgtgcgatac gccttccatc aggcagccgt cgcccataaa gacgtaagtg
     9181 tagtgatcga cgatgttcaa accgtcttta ttaaattcgg cggcaaggat tttttctgcc
     9241 aatgccatgc ccactgcgtt ggcaatacct tgccccaacg ggccggtcgt ggtttccacg
     9301 ccgtcggtgt agccgtattc gggatggccg ggggttttgc tgtgcagctg gcggaagttt
     9361 ttcagatctt caatgctcag gttgtagccg gtcaggtgca gcaggctgta caacagcata
     9421 gacgcatgac cgttggagag gacgaagcgg tcgcggttgt agaatttggg attggcggga
     9481 ttgtgattga ggaatttcgt ccacaatgtt tccgccattt ccgccatacc cataggcgcg
     9541 ccggggtggc cggaattggc tttttgaacg gcatcggccg agaggaagcg gattacgttt
     9601 gccagttgag acattttgta ttttccttgc tggtgtttcg gataagtgga taatcggaag
     9661 gcgttgatta tcgcccgatt cgcttatgc
//
LOCUS       DAXFZM010000083         9608 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.083, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000083 DAXFZM010000000
VERSION     DAXFZM010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9608)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9608)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9608
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.083"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(144..377)
                     /locus_tag="ACFJAG_001754"
     CDS             complement(144..377)
                     /locus_tag="ACFJAG_001754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin family protein"
                     /protein_id="HFC3980992.1"
                     /translation="MKLTLMFREYCSLCHKMRDALKPFQDEYGFGLEVVDVDENPVLE
                     EKYNELIPVLLAGDEEICHWFLDEDRLKQFLER"
     gene            complement(395..529)
                     /locus_tag="ACFJAG_001755"
     CDS             complement(395..529)
                     /locus_tag="ACFJAG_001755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3980993.1"
                     /translation="MPSELFRRHFCCFWQDLSIIFLEDIVFSQIDHDSAASKALACAN
                     "
     gene            complement(543..743)
                     /locus_tag="ACFJAG_001756"
     CDS             complement(543..743)
                     /locus_tag="ACFJAG_001756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HFC3980994.1"
                     /translation="MFVCICNAVTDHQIKETIAAGATTMGDLQSQLGVASCCGCCGEF
                     AASFLTAHNAQPTVTAGINVQA"
     gene            complement(915..1790)
                     /gene="xerD"
                     /locus_tag="ACFJAG_001757"
     CDS             complement(915..1790)
                     /gene="xerD"
                     /locus_tag="ACFJAG_001757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009009 - site-specific recombinase
                     activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HFC3980995.1"
                     /translation="MENGLIDRLLETLWLDRRLSRNTLDSYRRDLEKIARRLSLCGRT
                     LKDADEADLAAAVYVDGEQRGSQARALSACKRLYVWMEREGMRADNPTRLLKPPKIDR
                     NIPTLITEQQISRLLAAPDTDTPHGLRDKALLELMYATGLRVSEAVGLNFGNVDLDRG
                     CITTLGKGDKQRMVPMGQESAYWVERYYTEARPLLLKGRSCDALFVSQKKTGISRQLA
                     WMIVKEYAGRAGIGHISPHSLRHAFATHLVRHGLDLRVVQDMLGHADLNTTQIYTHVA
                     NVRLHSVVKEHHSRN"
     gene            complement(1842..2282)
                     /locus_tag="ACFJAG_001758"
     CDS             complement(1842..2282)
                     /locus_tag="ACFJAG_001758"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HFC3980996.1"
                     /translation="MDMKYEFTLPSSSGADFHSAEHLPLVVYFYPKDSTPGCTTEGLD
                     FNARLEQFEALGYTVVGISRDGVKAHQNFCAKQGFRFELLSDKDETVCRLFDVIKLKK
                     LYGKESLGIERSTFVLNKDGEIVREWRKVKVAGHAQEVLETLSR"
     gene            2603..3541
                     /locus_tag="ACFJAG_001759"
     CDS             2603..3541
                     /locus_tag="ACFJAG_001759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008800 - beta-lactamase activity
                     [Evidence IEA];
                     GO_process: GO:0030655 - beta-lactam antibiotic catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HFC3980997.1"
                     /translation="MSIRTLKRLPSSLLLGLCLSLPSAHLFADNDILGQFLEQNMLTS
                     SDPIEIFAESTIYPADTQAITGGLILSSQSALVVNNKTGQILYQKNADRIMPIASISK
                     LMSAMVVLDANLDMNETVTITPDEIDRLKGTGSRLAIGTALTRKELLHLSLMSSENRA
                     THALGRTYPGGMGAFVAAMNRKAQSLGMYGSRFYEPTGLNFQNVSTAKDLSLMVNAAA
                     QYPQIRTNSTSNYASVQTKNGQQNYKNSNALVREGMWNIELQKTGYIREAGRSMVVKA
                     NIQNQPVTIVLLNSPTSATRVNDARKIESWMLQQRS"
     gene            3670..3963
                     /gene="hfq"
                     /locus_tag="ACFJAG_001760"
     CDS             3670..3963
                     /gene="hfq"
                     /locus_tag="ACFJAG_001760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HFC3980998.1"
                     /translation="MTAKGQMLQDPFLNALRKEHVPVSIYLVNGIKLQGQVESFDQYV
                     VLLRNTSVTQMVYKHAISTIVPARSVNLQHENKPQAAPASTLVQVETVQQPAE"
     gene            4048..4614
                     /locus_tag="ACFJAG_001761"
                     /pseudo
     CDS             4048..4614
                     /locus_tag="ACFJAG_001761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237812.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
     gene            4668..5042
                     /locus_tag="ACFJAG_001762"
     CDS             4668..5042
                     /locus_tag="ACFJAG_001762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SirB2 family protein"
                     /protein_id="HFC3980999.1"
                     /translation="MQYLIVKYSHQIFVTITILVFNIRFFLLWKNPEKPLVGFWKALP
                     HLNDTMLLFTGLWLMKITHFSPFNAPWLGTKILLLFAYIALGMVMMRARPRSTKFYTV
                     YLLAMCCIACIVYLAKTKVLPF"
     gene            5052..5546
                     /gene="folK"
                     /locus_tag="ACFJAG_001763"
     CDS             5052..5546
                     /gene="folK"
                     /locus_tag="ACFJAG_001763"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003848 -
                     2-amino-4-hydroxy-6-hydroxymethyldihydropteridine
                     diphosphokinase activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HFC3981000.1"
                     /translation="MNNRHFAVIALGSNLDNPAQQIRGALDALSSHPDIRLEQASSLY
                     MTAPVGYDNQPDFINAVCTVSTTLDGIALLAELNRIEADFGRERSFRNAPRTLDLDII
                     DFDGISSDDPRLTLPHPRAHERSFVIRPLAEILPDFILGKYGKVVELSKRLGNQGIRL
                     LPDR"
     gene            complement(5674..6153)
                     /locus_tag="ACFJAG_001764"
     CDS             complement(5674..6153)
                     /locus_tag="ACFJAG_001764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HFC3981001.1"
                     /translation="MPESIFKQISSDILRLHRDSVYSLLATSGCNCQVHEAAYVNIDG
                     KYYIALSCEPEVGEVETGILLIEDESRNLRLSWVGSARELDRKDNAYKRALSALSRKL
                     GRCKDKLHTAVQPFLLELVPEKGRFSVGDEEVWISRNDLVRALYPVGYSMRQAVLQI"
     gene            complement(6373..7110)
                     /gene="ubiE"
                     /locus_tag="ACFJAG_001765"
     CDS             complement(6373..7110)
                     /gene="ubiE"
                     /locus_tag="ACFJAG_001765"
                     /EC_number="2.1.1.163"
                     /EC_number="2.1.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HFC3981002.1"
                     /translation="MGGQKTHFGFSTVNEDEKAGKVAEVFHSVAKNYDIMNDVMSAGL
                     HRVWKHFTIHTAHLKKGDKVLDIAGGTGDLSRGWAKRVGKEGEVWLTDINSSMLTVGR
                     DRLLNEGMILPVSLADAEKLPFPDNYFNLVSVAFGLRNMTYKDAALKEMYRVLKPGGT
                     LLVLEFSKIYKPLEGAYDFYSFKLLPVMGRLIAKDADSYQYLAESIRMHPDQETLKQM
                     MLDAGFDSVDYHNMSAGIVALHKGVKF"
     gene            complement(7153..7521)
                     /locus_tag="ACFJAG_001766"
     CDS             complement(7153..7521)
                     /locus_tag="ACFJAG_001766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF971 domain-containing protein"
                     /protein_id="HFC3981003.1"
                     /translation="MNNIPVEIRLLKNRAVLVLTYGDEPKNLPAEFLRVYSPSAEVRG
                     HGVGQDVLQTGKADVQITDLQPVGQYALKISFSDGHDSGLYDWAYLHRLAYGYDAMWQ
                     EYLDKLAAAGASRFEKQSDC"
     gene            7641..9260
                     /gene="mnmC"
                     /locus_tag="ACFJAG_001767"
     CDS             7641..9260
                     /gene="mnmC"
                     /locus_tag="ACFJAG_001767"
                     /EC_number="2.1.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016645 - oxidoreductase activity, acting
                     on the CH-NH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent
                     5-carboxymethylaminomethyl-2-thiouridine(34)
                     oxidoreductase MnmC"
                     /protein_id="HFC3981004.1"
                     /translation="MDNLVWDGIPDIRTLDQTIRKHAHPLNLIVCLPDNQIPDFQTAQ
                     DASDSECRLKHRLDQATQCLQFDSINLIEHILPDVRFWLVPPSRTRRLHEHFHHISWQ
                     TEAIPQTESKSDKPWFALPQTSERKKPEHVLVIGAGIAGASTAHALASHGISVTVLEA
                     RKAAQAASGNRQGLLYAKISPHDTGQTELLLAGYGYTKRLLGHILPDSDTWGGNGIIH
                     LNYSRTEQQRNHELGLQKHHNHLYRSITSAEAEKIAGIPLNTPYAEPLCGLYWQHGVW
                     LNPPAFVRTLLSHPLIELYENTTLTGISHDGEKWIASTPNGTFTATHIIYCTGAHSPC
                     LPETNLAALPLRQIRGQTGLTPSTPFSEQLRCAVSGESYISPSWHGLHCYGASFIPNS
                     SNTGWNEAEEASNRQALAHLNPALAESLFAANPNPQKHQGHAAIRCDSPDHLPVVGAL
                     GDIAAMRQTYAKLALDKNYRIDTTCPYLPNAYTNTAHGTRGLATAPICAAAVAAEILG
                     LPHLFSQRLRHALHPNRTVIRAIVRRQNLIP"
     gene            complement(9257..9406)
                     /locus_tag="ACFJAG_001768"
     CDS             complement(9257..9406)
                     /locus_tag="ACFJAG_001768"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981005.1"
                     /translation="MDSKGNLLGIPYSLFWEENVMGVFDILPSGLVCLFEYDFLWSGR
                     HAAKA"
BASE COUNT         2534 a         2967 c         1962 g         2145 t
ORIGIN      
        1 aatatgcaac accgtagaag attggcaatt taccaggcat ccaaacgtgc ttcctttacc
       61 ggcaggtcat cagccccaca aaaacgtaaa gaacgttgat ttgaaaaaaa tgccgtctga
      121 agtcctgctt cagacggcat tttttaccgt tcgagaaact gtttcaacct gtcctcatcc
      181 aaaaaccagt ggcaaatttc ctcatctccc gccaacaaaa cgggaatcag ctcattgtat
      241 ttttcttcca aaacaggatt ttcatccaca tcgaccactt ccagcccgaa cccgtattca
      301 tcctgaaaag gtttgagtgc atcgcgcatt ttgtggcaca agctgcaata ttcacgaaac
      361 atcaaggtca atttcatccg cgtttcctta tctgtcaatt tgcacacgcc aaagccttag
      421 acgcagcaga atcatggtct atttgggaaa aaacaatgtc ttcgaggaag atgatactca
      481 agtcctgcca aaaacagcaa aaatgccgtc tgaacagttc agacggcatt tccaaaaccg
      541 ttttacgctt gaacgttgat acccgccgta accgtcggtt gcgcgttgtg cgccgtcaga
      601 aacgaagcgg caaactcccc gcagcagccg cagcagctcg ccacgcccaa ttgcgactgc
      661 aaatcgccca ttgtggtcgc gccggcagcg atggtttcct tgatttgatg gtcggtaacg
      721 gcattgcaga tgcagacaaa cattttgtgc tccgtgtgtt ctcaaactat cgtaccgata
      781 gcgactttta ttatcgtacg caaatataaa taaaaacggt tcgcattgca aggtcggcat
      841 acacggtttg tcttggtaat tttttatcaa gtttgcattt tcgattgatt tcttattaaa
      901 ccgaagcaga agcctcagtt tcgggaatgg tgttccttaa ccacgctatg cagccgcaca
      961 ttggcaacat gggtataaat ctgagtcgtg ttcaaatcgg cgtgtcccaa catatcctga
     1021 actacgcgca aatccaatcc gtgccgcacc agatgcgtgg caaaggcgtg gcgcaggctg
     1081 tgcgggctga tgtgcccgat gcctgccctg ccggcatatt ctttgacaat catccacgcc
     1141 aactgccggg aaatgcccgt ttttttctga ctgacaaaca atgcgtcgca actcctgcct
     1201 ttcagcagaa gcgggcgtgc ctccgtataa tagcgttcca cccaatacgc tgactcctgt
     1261 cccatcggga ccatcctctg cttgtcgccc ttgcccagcg tggtaataca acccctgtcc
     1321 aaatccacat tgccgaaatt cagcccgacc gcctcgctga cgcgcaagcc ggtcgcgtac
     1381 atcaattcga gcagggcctt atcccgcaaa ccgtgcggcg tgtcggtatc cggtgcggca
     1441 agcagtcggg aaatctgctg ttctgtaatc agtgtcggga tgtttctgtc gatttttggc
     1501 ggtttcagca ggcgggtggg attgtccgcc ctcatccctt cccgttccat ccacacatac
     1561 aggcgtttgc acgccgacag tgcgcgtgcc tgcgaacccc gttgctcccc gtcaacataa
     1621 accgccgccg ccaaatctgc ttcgtccgca tccttcagcg ttctgccgca caaagacagc
     1681 cggcgggcga tcttttccaa atcccgccgg tagctgtcca aagtattccg actgagccgc
     1741 cgatccaacc acaaagtttc cagcagcctg tcaatcaaac cgttttccat agcgttccaa
     1801 accaatgccg tctgaatctt cttcagacgg catggtccac atcatcggga aagcgtttcc
     1861 aacacttcct gtgcatgacc cgccactttg actttccgcc actcccggac aatttcgccg
     1921 tccttgttca gaacgaacgt actgcgctcg atgcctaacg actctttccc atacagtttt
     1981 ttcaatttga tgacatcaaa caggcggcac accgtttcat ccttgtcgct caacagctcg
     2041 aaccggaaac cctgcttggc gcaaaaattc tgatgcgcct ttacgccgtc gcgggaaata
     2101 ccgaccacgg tataacccaa tgcctcaaac tgttccaaac gcgcattaaa atccaagcct
     2161 tccgtcgtac agcccggcgt actgtctttc ggataaaaat acacgaccaa aggcagatgt
     2221 tctgccgaat gaaaatccgc accgctgctc gaaggcaggg taaattcata tttcatatcc
     2281 atagtcctac tcccgatatt cccattattc aaaacggcac gcagacgcac cgccgcaatt
     2341 gccaaaccaa ccccgattct accgccccaa aggacaagga ttcaaccgcc ggaaacatcc
     2401 aaaccgacac acgacggcat gaaaaatatc catgtcaaac cacaaaatat gttccgattt
     2461 aaaaacagaa tgttataaaa cccaactcca aaaacacaac aagaccgccc gcctacgggc
     2521 agtctcctgt cagacgacat actttacaga tggctgtttt ttcaacaaaa taacgccaat
     2581 actcaaaaat acggaaccaa aaatgtccat ccgcaccctg aaacgcctgc cctcatcgct
     2641 gctgctcggc ctctgccttt ccctgccgtc agcccacctt tttgccgaca acgacatttt
     2701 agggcaattt ttagaacaga acatgcttac ctcctccgat ccgatagaaa tattcgccga
     2761 aagcacgata tatcccgccg atacccaggc cattacgggc gggctgattc tgtcctccca
     2821 atccgcactg gtcgtcaaca acaaaacagg gcaaatactg tatcagaaaa acgccgacag
     2881 gattatgccc attgcctcca tttccaagct catgagcgcg atggtcgttt tggatgcaaa
     2941 cttggacatg aacgaaaccg ttaccatcac acccgacgaa atcgaccgcc tcaaagggac
     3001 tggcagccgt cttgccatag gtacggcact tacacgtaaa gaactgctgc accttagcct
     3061 gatgagcagc gaaaaccgcg ccacccatgc attgggcaga acctaccccg gcggcatggg
     3121 cgcatttgtc gccgccatga accgcaaagc ccaaagcctg ggcatgtacg gcagccgctt
     3181 ttacgaaccg accggactca acttccaaaa cgtttccacc gccaaagacc tgagcctcat
     3241 ggtcaacgcc gccgcccaat atccgcaaat ccgcaccaac tcgacttcca actacgcctc
     3301 ggtacaaacc aaaaacgggc agcaaaacta taaaaactcc aatgccctgg tcagggaagg
     3361 catgtggaac atcgaattgc agaaaaccgg ctacatccgc gaggcaggca ggtctatggt
     3421 tgtcaaagcc aacattcaaa accaacccgt taccatcgta ttgctgaact cgcccacatc
     3481 cgccacacgc gtcaacgacg cccgcaaaat cgaatcgtgg atgctgcagc aacgctcctg
     3541 acatacaaat gcccggcgga aaaccgccca aacacaaaaa aattggtaat ttttcctatt
     3601 ccaggctaca attcgacacg cacagggcat ctgcccgatt tcacaatcat aatagcggag
     3661 ttaaaaaata tgacagctaa aggacaaatg ttgcaagatc ccttcctgaa cgcattgcgt
     3721 aaagagcatg ttccggtttc gatttactta gttaacggta tcaaattgca aggtcaggtc
     3781 gaatctttcg accaatacgt cgttcttctg agaaacactt ccgtaaccca aatggtttac
     3841 aaacacgcca tttccaccat cgtaccggct cgctccgtca acctccaaca tgaaaacaaa
     3901 ccccaagccg caccggcttc gacccttgtc caagtggaaa ccgtccagca gcctgccgaa
     3961 taatccgcac gaagcatgac gtgtcatatc tttcaatacc ttaccggaca acggtaaggt
     4021 atttttattt tcaggcggca tttaaaaata ttattgaaaa acatccttcc attcgcccat
     4081 tgccttttgc gggaggcact tcccgaaggc ggcaatgcgc tggacggcac cgccggcaac
     4141 ggacacgaca cccttttcct cgcacaaacc gcaggcaaca gggggaaagt gtgggcattc
     4201 gacatccagc cgcaagccct gaacaacacc cgatgccgtc tgcaggaagc aggttacagc
     4261 aatgtacggc tcatcttgga cggacatgaa aacctgaagc aatatattcc ggagccgctg
     4321 gatgcagccg ttttcaattt cggctggttg cccggaggcg acaagaatct gaccaccgac
     4381 aaggaaacca gcattcccgc cctttgagca accctctccc tgctgaaaga agacggtatg
     4441 cttattgccg tcctctatcc gggacacgaa aacggcaaac aggaggcaga agccgtcgga
     4501 caatgggcaa aaaacctgcc tcaagaacag tttgccgttt tacattacgg ctttaccaac
     4561 cggaagaata gcccacccta tcttttggca tttgaaaaac tgcgtcaaaa ataactgttt
     4621 gcggtaaaat aagccgattc taacccttat tttgatacga gccgaccatg cagtatctga
     4681 ttgtcaaata cagccatcaa atcttcgtta ccatcaccat tttggtattc aacatccgtt
     4741 ttttcctact ttggaaaaat ccagaaaagc ccttggtcgg cttttggaaa gcactgcccc
     4801 acctcaacga cacgatgctg ctgtttacgg gattgtggct gatgaagatt acccatttct
     4861 ccccgttcaa cgcgccttgg ctcggcacaa aaatcctgct cctgttcgcc tacatcgcac
     4921 tgggcatggt aatgatgcgc gcccgtccgc gttcgaccaa gttctacacc gtttacctgc
     4981 tcgctatgtg ttgcatcgcc tgcatcgttt accttgccaa aaccaaagtc ctgccattct
     5041 gaaacactgc catgaacaac agacattttg ccgtcatcgc cttgggcagc aaccttgaca
     5101 accccgcaca acaaatacgc ggcgcattag acgcgctctc gtcccatcct gacatccggc
     5161 ttgaacaggc ttcctcactg tatatgaccg cacccgtcgg ttacgacaat cagcccgatt
     5221 tcatcaatgc cgtctgcacc gtttccacca ccttggacgg cattgccctg cttgccgaac
     5281 tcaaccgtat cgaagccgat ttcggacgcg aacgcagttt ccgcaatgca ccgcgcacat
     5341 tggatttgga cattatcgac tttgacggca tctccagcga cgacccccgc cttaccctgc
     5401 cgcatccgcg cgcgcacgaa cgcagtttcg tcatacgccc tttggcagaa atcctccctg
     5461 attttatttt gggaaaatac ggaaaggttg tcgaattgtc aaaacggctg ggcaatcaag
     5521 gcatccgtct tttaccggac aggtaattcc gcacgcggat gccgtccgaa caccggtttc
     5581 agacggcatt tttcctttgc cgccaacacg cgtgcaaaaa aaatcgcccc ttgagaaagg
     5641 ggcgcaaaag gaacacaaac cactaccaaa actttaaatc tgcaacactg cctgccgcat
     5701 actgtacccg acaggatata aggccctcac taaatcgttt cgagaaatcc aaacttcttc
     5761 atcaccgaca gaaaatctgc ctttctccgg caccagctcc aacaaaaacg gctgaaccgc
     5821 cgtatgcagc ttgtccttac accgccccag ctttctggac aacgcggaca gggcgcgttt
     5881 gtaggcatta tccttgcggt cgagctccct cgcactaccg acccagctca aacgaaggtt
     5941 gcggctttca tcttcaatca acaaaatacc tgtttcaact tcccccacct cgggttcgca
     6001 cgaaagcgca atataatatt tgccgtcaat attgacatat gccgcttcat gcacctgaca
     6061 gttgcaaccc gaggttgcta gcagggaata aacagaatca cggtgcagcc tcaaaatatc
     6121 ggaggaaatc tgtttgaaaa tactttccgg catttttccc tcctttcgtc tgctgcgttg
     6181 tttactggat tgactgcatt atacagacat ctcccaattt tacaaatgat aattgttcct
     6241 attttttaaa aagtttataa attattgata aatatatgaa ttaattttta agatttaaaa
     6301 cctttgtctc aaaaaataca aaaatgccgt ctgaaacgtg ttcagacggc attggcttca
     6361 caggcagtcc gtttaaaatt tcacgccctt atgcagcgcg acgatgcccg cactcatatt
     6421 gtgataatcc acgctgtcga agcctgcatc cagcatcatc tgtttcaaag tttcctgatc
     6481 ggggtgcata cggatggatt cggcgagata ctggtagctg tccgcatctt tggcaatcag
     6541 cctgcccatc accggcaaca gcttgaaaga ataaaaatcg tatgcgcctt cgagcggctt
     6601 gtagattttg gaaaactcca acaccagcaa cgtaccgccc ggtttcaaaa cacggtacat
     6661 ttccttaagc gcggcatctt tatacgtcat gttccgcaag ccgaacgcca cggagaccaa
     6721 gttgaaataa ttgtcgggga aaggcagttt ttccgcatcg gcaagcgaca cgggtaaaat
     6781 catgccttcg ttcaacagac ggtcgcgccc gacggtcagc atagaagaat taatatcggt
     6841 cagccaaacc tcgccttcct tgccgacccg tttcgcccaa ccgcgcgaca aatcgcccgt
     6901 accgcccgca atgtccaaca ctttatctcc ttttttcagg tgcgccgtat ggatggtaaa
     6961 atgcttccat acgcggtgca gccctgccga catcacatca ttcataatgt cgtagttttt
     7021 ggcgacggag tgaaacactt ccgccacttt tccggctttc tcatcttcgt tgaccgtgct
     7081 gaacccgaaa tgcgtttttt gtccgcccat attctaacca cctccctgat accgccctac
     7141 ggcatcccaa acttaacaat ctgattgctt ttcaaaacgc gacgcgcccg ccgccgccaa
     7201 tttgtccaaa tattcctgcc acatcgcatc gtatccgtat gccagtctgt gcagatacgc
     7261 ccaatcgtaa agaccgctgt cgtgcccgtc cgaaaaactg attttcagcg catactgtcc
     7321 gacaggctgc aaatccgtaa tctgcacatc cgccttaccg gtctgcaaaa catcctgtcc
     7381 cacgccgtgt ccgcgcactt ccgcactcgg cgaatagacg cgtaaaaatt cggcaggcag
     7441 atttttaggt tcgtccccat aagtcaaaac caacacggca cggtttttca acaaacggat
     7501 ttcaacagga atattattca aaaaacacct cggttcggca tacaatatcc ggcaggcgta
     7561 cgcgtgcctt taaacggcgc gtattttaac agctttatcc cgataccgat attcaaaccc
     7621 acacttcaga cggcattgat atggacaatc tcgtatggga cggcattccc gacatccgca
     7681 cactcgacca aaccatccgc aaacacgcac acccgctcaa cctgattgtc tgcctccccg
     7741 ataatcagat tcccgatttt caaaccgcac aagatgcttc ggactcggaa tgccgtctga
     7801 agcaccgttt ggatcaggca acccagtgcc tccagttcga cagcatcaac ctcatcgaac
     7861 acatcctgcc cgatgtccgc ttctggctgg ttcccccttc acgcacccgc cgcctgcacg
     7921 aacacttcca ccacatttcc tggcagaccg aagccatccc gcaaaccgaa agcaagtccg
     7981 acaaaccctg gtttgcactt ccacaaacat ccgaacggaa aaaaccggaa cacgtcctcg
     8041 tcatcggtgc aggcattgcc ggcgcatcga ccgcccacgc cttagcatca cacggcattt
     8101 ccgttaccgt attggaagcc cgaaaagccg ctcaagccgc cagcggcaac cggcaagggc
     8161 tgctttacgc caaaatctcg ccgcacgaca ccggacagac cgaactgctg cttgccggct
     8221 acggctacac caaacgcctg ctcggacaca tcctgcccga ctccgacact tggggcggca
     8281 acggcatcat ccacctcaat tacagccgca ccgaacaaca acgcaatcac gaattgggtt
     8341 tgcaaaaaca ccataaccac ctctaccgca gcatcacgtc tgcagaagcc gaaaaaatcg
     8401 ccggcatccc gctgaacacg ccctacgccg aaccattatg cggactctac tggcaacacg
     8461 gcgtatggct caatccgccc gcattcgtcc gcaccctcct cagccatccg ctgatcgaac
     8521 tatatgaaaa cacaacgtta accggcattt cccacgacgg agaaaagtgg attgcaagca
     8581 cgccaaacgg cacatttacc gccacacaca tcatctactg caccggcgcg cacagcccct
     8641 gcctgcccga aaccaacctc gccgccctac ccctcaggca aatacgcgga caaaccggcc
     8701 tcacaccgtc caccccgttt tccgaacaac tgcgttgcgc cgtttcaggc gaaagctaca
     8761 tcagcccgtc gtggcacgga ctgcactgct acggcgcgag ttttattccc aacagcagca
     8821 ataccggatg gaacgaagcc gaagaagcct caaaccgcca agcattggca caccttaacc
     8881 ccgcccttgc cgaatcattg tttgccgcca acccaaaccc ccaaaaacac caagggcacg
     8941 ccgccatacg ctgcgacagc cccgaccacc tccccgtcgt cggcgcactc ggcgacattg
     9001 ccgccatgcg gcagacttac gccaaacttg cactggacaa aaactaccgc atcgacacca
     9061 catgcccata tctgcccaat gcctacacca ataccgccca cggcacacgc gggcttgcca
     9121 ccgcccccat ctgcgccgcc gccgttgccg ccgaaatcct aggcttgccc catctctttt
     9181 cacaacgcct gcgccacgcc ctacacccca accgcaccgt catccgcgcc atcgtcagaa
     9241 ggcagaacct gattccttaa gcctttgccg catgccgtcc cgaccacaaa aaatcatatt
     9301 caaataaaca taccaatcct gacggtaaaa tatcgaaaac acccataacg ttttcttccc
     9361 aaaataagga gtaaggaatg cctaacaaat tgcctttgct gtccaagatg aattttccgt
     9421 aacattcgaa gacttcctta accctgccag ccgcttcggt ttctgtaccc cctgttagat
     9481 aaggaaggga tgaaaaagcc ctgttacttg tatgaagcaa agggcgttaa tttttgttaa
     9541 tcttcccttc tcaggaactc aatatataag gatgttaatt tttatttccc ttctcgagga
     9601 ctcaatag
//
LOCUS       DAXFZM010000084         9185 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.084, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000084 DAXFZM010000000
VERSION     DAXFZM010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9185)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9185)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9185
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.084"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(102..2954)
                     /gene="gcvP"
                     /locus_tag="ACFJAG_001769"
     CDS             complement(102..2954)
                     /gene="gcvP"
                     /locus_tag="ACFJAG_001769"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004375 - glycine dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase"
                     /protein_id="HFC3981006.1"
                     /translation="MKLSELFNPNEFAARHLSFGDEAALLAAVGEKSMDDFVGNTLPQ
                     SIRMPSELDLPEALTEADALAKLKGIASKNVINKSYIGLGYYPTRVPNVILRNVLENP
                     GWYTAYTPYQAEIAQGRLEALLNFQQVCIDLTGFPVAGASLLDEATAAAEAMAMAHRV
                     GKVKSERFFVDARVYPQTLDVMKTRAKYFGFELVVSDFAQADEGEYFGALFQYVGKDG
                     DVQDLQDVIGRLKAKGTIVAVAADIMSLVLLKSPAELGADIALGNTQRFGVPMGFGGP
                     HAAYFAFKDEFKRSAPGRIIGVSKDASGKPALRMALSTREQHIRREKATSNICTAQAL
                     LANLAGMYAVYHGPKGVKRIANRIHTLASVFADALVSDGLKVVHEVFFDTVTVDFGSK
                     EKADQVFAAALESGYNLRRVNNTQVAAAFHETSVYEDLADLYRAFTGKDTFTFADDVK
                     GRLNAELLRQDDILQHPVYNSYHTEHEMLRYLKKLEDRDLAMNRSMISLGSCTMKLNA
                     TAEMLPITWTEFSDIHPYAPEAQTAGYRELLADMENSLKAITGFDAISFQPNSGAQGE
                     YSGMLAIRRYQEAQGEAHRNICLIPKSAHGTNPATAAMLGLKVVVVDTDEHGNVNIDD
                     LKAKAEQHRDALSAIMITYPSTHGVYEEGIRDICRIIHENGGQVYMDGANLNAQIGIM
                     QPAEVGADVLHMNLHKTFCIPHGGGGPGMGPIGLKAHLAPFAPGHTLTDTHSASAGQT
                     SVAAAAFGSASILPITWMYLTMMGKQGMEQATRWALLNANYVAKRLSEDYPILYTGKN
                     GRIAHECIVDLRPLKAESGITETDIAKRLMDYGFHAPTVSFPVAGTLMIEPTESESKA
                     ELDRFIAALKSIRREVQKVIDGEWPKDDNPLVNAPHTAADITGEWAHPYSREEAVFPL
                     PFVREHKFWPFVNRVDDVYGDRNLVCSCPPMENYED"
     gene            complement(2985..3344)
                     /locus_tag="ACFJAG_001770"
     CDS             complement(2985..3344)
                     /locus_tag="ACFJAG_001770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981007.1"
                     /translation="MTDRPNLLRIKPGQAEIMEYCEPEEASDPYATYRRANLMAGLPL
                     FVVILVLLNVVFPLPAHPLAWLVPAGFMVLGGGFPLSLPLVALLVPTCCILARCPPLS
                     RLLCHPCPNHPMSKNSA"
     gene            3343..3522
                     /locus_tag="ACFJAG_001771"
     CDS             3343..3522
                     /locus_tag="ACFJAG_001771"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate (Si)-synthase"
                     /protein_id="HFC3981008.1"
                     /translation="MPSEPAGRLSQKTPYRCNFMRLYGVGFALQTAYASRSSLVSQSV
                     HDYINNLGADKPLFI"
     gene            complement(3515..4156)
                     /locus_tag="ACFJAG_001772"
     CDS             complement(3515..4156)
                     /locus_tag="ACFJAG_001772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylesterase"
                     /protein_id="HFC3981009.1"
                     /translation="MPSEKPMNRRTFLLGAGALLLTACGRKSARTHAKIPEGSTVLAL
                     GDSLTFGYGANPGESYPAQLQKLTGWNIVNGGVSGDTSAQALSRLPALLARKPKLVIV
                     GIGGNDFLRKVPEEQTRANIAKIIETVQKENIPAVLVGVPHITLGALFGHLSDHPLYE
                     DLSEEYGIPLFGGAWAEILGNNNLKSDQIHANGKGYRKFAENLNQFLRKHGFR"
     gene            complement(4146..4697)
                     /locus_tag="ACFJAG_001773"
     CDS             complement(4146..4697)
                     /locus_tag="ACFJAG_001773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HFC3981010.1"
                     /translation="MNYCEFAASLPENTDNPNKHYHDTQYGFPIKDDNGLFERLVLEI
                     NQAGLSWTLMLKKRQAFQTAFEGFDIDTVAAFGEADIERLLTDAGIVRNRLKIDAAIF
                     NARQIQALQQEHGSFKNWLDAHHPRSKDEWVKLFKKHFKFVGGEIVGEFLMSTGYLKG
                     AHAESCPVYRKTLKYHPKWLDAV"
     gene            complement(4701..5219)
                     /locus_tag="ACFJAG_001774"
     CDS             complement(4701..5219)
                     /locus_tag="ACFJAG_001774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity-associated transporter
                     subunit PqiC"
                     /protein_id="HFC3981011.1"
                     /translation="MRLFPIAAALTLAACGTVQSTQYFVLPDSRYIRPATQGGETAVE
                     VRLAEPLKRGGLVYQTDPYRINTAQNHVWADTLDDMLEAALSNAFNRLDSTRTFVPAS
                     RSGSTDKWTVYIDAFQGSYTGKTLISGYAVLPDGTNRPFHIETEQQGDGYAAMTAALE
                     QGLKQAAQQMVE"
     gene            complement(5219..6880)
                     /gene="pqiB"
                     /locus_tag="ACFJAG_001775"
     CDS             complement(5219..6880)
                     /gene="pqiB"
                     /locus_tag="ACFJAG_001775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intermembrane transport protein PqiB"
                     /protein_id="HFC3981012.1"
                     /translation="MTDNSPPPNGHAQARVRKNNTFLSAVWLVPLIALIAGGWLWVKE
                     IRNRGPVVTLLMDSAEGIEVNNTVIKVLSIDVGRVTRIKLRDDQKGVEVTAQLNADVS
                     GLIRSDTQFWVVKPRIDQSGVTGLGTLLSGSYIAFTPGKSGEAKDVFQVQDIPPVTAI
                     GQSGLRLNLIGKNDRILNVNSPVLYENFMVGQIESAHFDPSDQSVHYTIFIQSPNDKL
                     IHSASRFWLESGINIETTGSGIKLNSAPLPALLSGAISFDSPKTKNSKNVKSEDSFTL
                     YDSRSEIANLPDDRSLYYTAFFKQSVRGLTVGSPVEYKGLNVGMVSDVPYFDRNDSLH
                     LFENGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGGKMI
                     ELNDQPSASPKLRPHTVYAGDTVIATRGGGLDDLQAKLADLLDKFNNLPLDKTVAELN
                     GSLAELKSALKSANAALSSIDKLVGNPQTQNIPNELNQTLKELRITLQGVSPQSPIYG
                     DVQNTLQSLDKTLKDVQPVINTLKEKPNALIFNNSSKDPIPKGSR"
     gene            complement(6873..8207)
                     /locus_tag="ACFJAG_001776"
     CDS             complement(6873..8207)
                     /locus_tag="ACFJAG_001776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="paraquat-inducible protein A"
                     /protein_id="HFC3981013.1"
                     /translation="MPPFIFATFPMKPFAENIPHSLRGNCRDEALPPHTVDCPECGCR
                     TDVPQLDKGEAAFCPRCGHKLFRVGSHPFSGPPAYAAASLILMAFAYSMTYIEVGIPG
                     AASVLSLPEMMRLMVFQDYGFLAEVMFVLTFGAPVLFLLLCLYVYAALIRKQAYPALR
                     LATRVMVRLRQAMMVDVFFVSTLVAYIKLSSVAKVRFGPAFYLMFALSVMLIRTSVSV
                     PQHWVYFQIGRLTGNNAVQTASEGKTCCSRCLYFRDSAESPCGVCGAELYRRRPKSLS
                     ISSAFLTAAVVLYFPANILPIMISSNPAATEANTIFSGIAYMWDEGDRLIAAVIFSAS
                     ILVPVLKIAAMSVLIAAARFALPAGAKKLSHLYRITEAVGRWSMIDIFVIIILMCSFH
                     TYAARVIPGSAAVYFCLVVILTMLSAYYFDPRLLWDKRASDGIAFNETEKYD"
     gene            8518..9147
                     /locus_tag="ACFJAG_001777"
     CDS             8518..9147
                     /locus_tag="ACFJAG_001777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biliverdin-producing heme oxygenase"
                     /protein_id="HFC3981014.1"
                     /translation="MSETENQALTFAKRLKADTTAVHDSVDNLVMSVQPFVSKENYIK
                     FLKLQSVFHKAVDHIYKDPELNKAISELEYMARYDAVTQDLKDLGEEPYKFDKELPHE
                     TGNKAVGWLYCAEGSNLGAAFLFKHAQKLDYTGEHGARHLAPHPDGRGKHWRAFVEHL
                     NALNLTPEAEAEAIQGAQEAFAFYKVILRETFGLPEGTEAPEGMMPHRH"
BASE COUNT         2046 a         2374 c         2621 g         2144 t
ORIGIN      
        1 agttatagtc gagatacgtg tatcggtgca accggtctgc cgttgacgaa aatgccgtct
       61 gaaagtgttt cagacggcat ttgtcttcgg ggtttcaaca gtcagtcttc ataattttcc
      121 atcggcgggc agctgcacac gaggttgcgg tcgccgtaca cgtcgtccac gcggttgacg
      181 aagggccaga acttgtgttc gcgcacgaag ggcagcggga agacggcttc ttcgcgagag
      241 tacggatgcg cccattcgcc ggttatatct gcggcggtgt gcggcgcgtt gaccagtggg
      301 ttgtcgtctt tcggccattc gccgtcgatg actttctgca cttcgcggcg aatggatttc
      361 agggcggcga tgaagcggtc gagttcggct ttgctttcgc tctcggtcgg ttcgatcatc
      421 agcgtgccgg caacagggaa ggaaaccgtc ggcgcgtgga agccgtagtc catcaggcgt
      481 ttggcgatgt cggtttcggt gatgccgctt tcggctttga gcggacgcaa atcgacgatg
      541 cattcgtgcg cgatgcggcc gtttttgcct gtatacagaa tcggatagtc ttcgctcaag
      601 cgtttagcga catagttggc gttgagcaat gcccagcgtg ttgcctgttc catgccttgt
      661 ttgcccatca tggtcaggta catccaagta atcggcagga tggatgcaga accgaaggct
      721 gcggcggcaa cggaggtttg cccggcactt gcgctgtggg tgtcggtcag ggtatgcccc
      781 ggtgcgaacg gggcgaggtg ggctttcaag ccaatcggac ccatgcccgg gccgccgccg
      841 ccgtgaggga tacagaaggt tttgtgcagg ttcatgtgca acacgtccgc gccgacttcg
      901 gcgggctgca tgatgccgat ttgggcattg aggtttgcgc cgtccatgta aacctgtccg
      961 ccgttttcgt gaatgatccg gcagatgtcg cggatgcctt cttcgtacac gccgtgtgtg
     1021 gacggatagg taatcatgat ggcggacaag gcatcgcggt gttgttcggc tttggctttc
     1081 aaatcgtcaa tattgacgtt gccgtgttcg tcggtatcga cgacgacgac tttcaaaccg
     1141 agcatggcgg cggtggcggg gttggtgccg tgggcggatt tgggaatcag gcagatgttg
     1201 cggtgtgctt cgccttgggc ttcctgataa cggcggatgg cgagcatacc gctgtattcg
     1261 ccttgtgcgc cggagttggg ctggaaggaa atcgcgtcaa agccggtgat ggctttcagg
     1321 ctgttttcca tatcagcaag caattcgcgg tagccggcgg tttgcgcttc gggagcgtaa
     1381 gggtggatgt cggagaactc agtccaagta atcggcaaca tttccgcagt cgcattgagc
     1441 ttcatggtgc agctcccgag cgaaatcatg ctgcggttca tagccaagtc gcggtcttcg
     1501 agttttttca ggtagcgcaa catttcgtgt tcggtgtggt aactgttgta cacaggatgt
     1561 tgcagaatgt cgtcttgacg cagtaattcg gcgttcagac ggcctttgac atcatcggca
     1621 aatgtgaacg tatccttgcc ggtaaacgcg cggtacaaat cggccaaatc ttcgtatacc
     1681 gacgtttcat ggaatgcagc cgcaacttga gtattgttga cgcggcgcag gttgtaaccc
     1741 gactccaaag cagcggcaaa cacttggtct gctttctctt tgctgccgaa atcgacggta
     1801 acggtatcga agaagacttc gtgaaccact ttgaggccgt ctgaaaccag cgcgtcggca
     1861 aagacggaag ccagtgtgtg aatgcggttg gcgatgcgtt tcacgccttt ggggccgtga
     1921 taaacggcgt acatgcccgc caagttcgcc agcaatgcct gtgcggtaca aatattggat
     1981 gtcgcttttt cgcggcggat gtgttgttcg cgggtggaca aagccatgcg caaggcaggt
     2041 ttgcccgatg cgtctttgga tacgccgatg atgcggcccg gggcggagcg tttgaactcg
     2101 tctttaaacg cgaaataagc ggcgtgcgga ccaccaaagc ccatcggtac gccgaaacgt
     2161 tgggtgttgc ccaaagcaat atctgcaccc aattcagccg gagacttcag caaaaccaag
     2221 ctcatgatgt cggcggcaac agcaacgatt gtgcctttgg ctttcagacg gccgataacg
     2281 tcctgcaagt cttgcacgtc gccgtcttta ccgacgtatt ggaacagcgc gccgaagtat
     2341 tcgccttcat ccgcttgggc aaaatcgctg accaccagct cgaagccgaa atatttggcg
     2401 cgggttttca tcacgtccaa agtttgcgga tacacgcgcg catccacaaa gaaacgctcg
     2461 gatttcactt tgcccacgcg gtgcgccatc gccatcgctt cggcggcggc ggtcgcttcg
     2521 tccaacaaag acgcgcccgc cacagggaaa ccggtcaaat cgatgcacac ctgctggaag
     2581 ttcaacaacg cttccaaacg accttgggca atctccgcct gatacggcgt gtaggcggtg
     2641 taccagcccg ggttttccaa tacgttgcgc aaaatcacgt tcggcacgcg ggtcgggtaa
     2701 taacccaagc cgatatagga cttgttgatc acgtttttcg acgcgatgcc tttcaatttc
     2761 gccaatgcgt ccgcctcggt cagggcttcg ggcaaatcga gttcggacgg catacggatg
     2821 ctttgcggca aggtgttgcc gacaaagtcg tccatgctct tctcgccgac agcggcaagc
     2881 aacgccgctt cgtcgccgaa actcaaatgg cgcgcggcaa attcgttggg gttgaacagt
     2941 tcggacagtt tcatttctac tccttcgggt ttgtagggct gccatcaggc agaattttta
     3001 gacatcggat gattcgggca agggtggcac aaaaggcggg ataatggcgg acaacgcgcc
     3061 agaatgcagc aggtcgggac aagcagcgcc acaagcggca gcgataaggg aaagccgccg
     3121 cccaaaacca tgaaacctgc aggcaccagc caagccaagg gatgagccgg aagcggaaaa
     3181 acaacattga gcagaaccaa aatcacgaca aacagcggca gccccgccat caggttggca
     3241 cgcctgtatg ttgcgtacgg gtcggatgct tcttcaggtt cgcaatattc catgatttca
     3301 gcctgtccgg gctttatccg cagcaggttc ggacggtcgg tcatgccgtc tgaaccggca
     3361 ggccgtcttt ctcaaaaaac gccataccgc tgcaacttca tgcggctgta tggcgtaggt
     3421 tttgcacttc agacggcata tgcgtcccga agcagtttgg tgtcccagtc ggttcatgat
     3481 tatataaaca acttgggtgc ggataaacct ttgtttatct aaacccatgt tttctcaaaa
     3541 attgattcaa attttcggcg aatttccgat agcctttgcc gttggcgtgg atttggtcgg
     3601 atttcagatt attattgccc aaaatttccg cccacgcgcc gccgaacaac ggaatgccgt
     3661 attcctcgga caaatcctca tacagcggat ggtcgctcaa atgcccgaac aacgcgccca
     3721 gtgtgatgtg cggcacgccg acgaggacgg cgggaatgtt ttccttttgc acggtttcga
     3781 tgattttcgc gatattggcg cgggtctgct cctcgggaac tttgcgcaga aagtcgttgc
     3841 cgcctatgcc gacaatcaca agcttgggtt tgcgtgccaa cagcgcgggc aggcgcgata
     3901 gggcttgcgc ggacgtatcg cccgatacgc cgccgttgac aatattccaa cccgtcagtt
     3961 tttgcagttg cgcggggtag gattcgccgg ggtttgctcc gtagccgaag gtgagcgaat
     4021 cgcccaaggc aagcacggtg cttccttcgg gaattttggc gtgggttcgg gcggattttc
     4081 tgccgcaggc ggtaagaagc aacgcgcctg cgccgaggag gaaggttctt ctgttcattg
     4141 gtttttcaga cggcatcgag ccatttcggg tggtatttca gggttttacg gtaaaccgga
     4201 cagctttcgg cgtgcgcgcc tttgaggtag ccggtactca tcagaaattc gccgacgatt
     4261 tcgccgccga cgaatttgaa atgtttttta aagagtttga cccattcgtc tttgcttcgc
     4321 ggatggtgcg cgtcgagcca gttcttgaac gaaccgtgtt cttgttgcaa cgcttggatt
     4381 tgccgtgcat tgaaaatggc ggcatcgatt ttcagacggt tgcggacaat acccgcatcg
     4441 gtaagcagcc gttcaatatc ggcttcgcca aatgcggcga ccgtatcgat gtcgaaacct
     4501 tcaaatgccg tctgaaacgc ctgccgcttc ttcagcatca gcgtccaact taatcctgcc
     4561 tgattgattt ccaacaccag ccgttcaaac agtccgttgt cgtccttaat cggaaaaccg
     4621 tattgcgtat cgtggtaatg tttgttcggg ttgtcggtgt tttcgggaag tgaggcggca
     4681 aattcgcaat agttcacggt ttactcgacc atctgttgcg ccgcctgttt cagtccctgt
     4741 tcgagtgcgg cggtcatggc ggcgtagccg tcaccctgct gttcggtttc gatatggaag
     4801 ggtctgttcg taccgtcggg taggacggcg tagccgctga tgagggtttt gcccgtgtag
     4861 ctgccttgga atgcgtcgat atagaccgtc catttgtcgg tactgccgct gcgtgaggca
     4921 ggaacaaagg tgcgtgtgct gtccaaacgg ttgaatgcat tgctcaacgc cgcttcgagc
     4981 atatcgtcca aggtgtctgc ccaaacatgg ttttgtgcgg tgttgatgcg gtaggggtcg
     5041 gtttgataga ccagtccgcc gcgtttgagc ggttcggcaa gacggacttc gacggcggtt
     5101 tcgccgcctt gcgttgcagg acggatgtag cggctgtcgg gcaacacgaa atattgtgtg
     5161 ctttgcacag taccgcaggc ggcaagcgtc agggcggcgg cgatggggaa aaggcgcatt
     5221 atcggcttcc tttcgggata gggtctttgc tgctgttgtt gaaaatcagt gcgttgggtt
     5281 tttctttcaa agtgttaatg acgggttgaa cgtcttttaa ggttttgtcc aaactttgca
     5341 gcgtattttg tacgtctccg tagataggcg attgaggcga tacgccttgc agggttatgc
     5401 gcaactcttt cagagtttgg ttcagttcgt tcgggatgtt ttgcgtctgc ggattgccga
     5461 ccagtttgtc aatggagctt agggcggcat tggcggattt gagtgcggac ttgagttcgg
     5521 cgagcgagcc gttcaattcg gcaacggttt tatccaatgg cagattgttg aatttgtcca
     5581 gcaaatccgc caatttggcc tgcaagtcgt ccaaaccgcc gcctcgtgtg gcgatgacgg
     5641 tatcgcctgc ataaacggta tgcggtcgca gcttgggcga ggcggaaggc tgatcgttca
     5701 actcaatcat tttgccgccg gtcagcaggt tgttgctgga gatggtggcg gtcaggcctt
     5761 tgtttaaggc cgtctggaat tgttgtttcc aatgctcttt gctttgctcg tcggcattga
     5821 tttccaaacg ggaaggctcg atgcggatgc gtacgggaat ccagccgttt tcaaacaggt
     5881 gcaggctgtc attgcggtca aaataaggga catcggaaac catgccgaca ttcagccctt
     5941 tgtattcgac aggcgaaccg acggtcagtc cgcgcacgga ttgtttgaaa aacgcggtgt
     6001 agtacagcga gcggtcgtca ggcaggttgg cgatttcgct gcggctgtcg taaagcgtga
     6061 agctgtcctc gcttttgacg tttttactgt ttttggtttt cggcgaatca aatgaaatcg
     6121 cgcctgacag cagggcaggc agaggggcgg aattgagttt gatgccgctg cctgtggttt
     6181 cgatattgat gccgctttcc agccaaaaac ggctggcgga atgaatcagt ttgtcgttgg
     6241 ggctttggat gaagatggtg taatgcacgc tttggtcgga cgggtcgaaa tgcgcgcttt
     6301 cgatttgccc gaccataaag ttttcataca aaacagggct gttgacgttg aggatgcggt
     6361 cgtttttacc aatcaaattc aagcgcagcc cgctttgccc gatggcggta acgggcggaa
     6421 tgtcctgcac ttggaacacg tcttttgcct cgccgctttt gccgggtgta aaagcgatgt
     6481 acgaacccga aagcagcgta cccaaaccgg ttacgccgct ttggtcgata cgcggcttga
     6541 ccacccagaa ctgggtatcg ctgcggatga ggccggatac gtccgcattg agttgggcag
     6601 taacttccac gcctttttgg tcgtcgcgca gtttgattcg ggtaacgcgt ccgacatcga
     6661 tgctcaatac cttaatgacc gtattgttga cttcgatgcc ttccgcgctg tccatcaaga
     6721 gcgtaaccac aggccccctg ttgcggattt ccttaaccca aagccagccg ccggcaatca
     6781 gcgcgatcag cgggaccagc cagacggcgg agaggaaggt gttgtttttg cggacgcgtg
     6841 cttgagcgtg tccgtttgga ggagggctgt tgtcagtcat atttttccgt ttcgttgaaa
     6901 gcaatgccgt ctgaagcgcg tttgtcccaa agcaggcgcg ggtcgaaata ataggcggac
     6961 agcatcgtca aaatcacgac caggcagaaa tagactgccg cactgcccgg aatgacgcgc
     7021 gcggcataag tgtggaacga acacatcaaa ataataatca caaaaatatc aatcatcgac
     7081 cagcggccga ccgcttcggt gatgcggtag aggtgcgaca atttctttgc gcccgccggc
     7141 aaagcgaacc gtgccgccgc aatcaaaacc gacattgccg caatcttcag caccggcacc
     7201 aaaatactcg cgctgaaaat aaccgccgca atcagcctgt cgccctcgtc ccacatataa
     7261 gcgatgccgc taaagatggt gttggcctcc gtggcggcag gattggacga aatcataatc
     7321 ggcaggatat tggcagggaa atacaaaaca accgccgccg tcagaaacgc cgacgaaata
     7381 ctcagacttt tcggccgtcg gcggtacagt tccgcgccgc acaccccgca gggggattcg
     7441 gcactgtcgc ggaaatacag gcagcggctg caacaggttt tgccttccga tgccgtctga
     7501 accgcattat tccccgtcag ccgcccgatt tggaaataca cccaatgctg gggaaccgat
     7561 accgaagtcc gaatcagcat aaccgacagc gcgaacatca gataaaacgc cggcccgaag
     7621 cgaacctttg ccacagacga gagcttgata tacgccacca gagtggaaac aaaaaacaca
     7681 tccaccatca tcgcctgcct caagcgcacc atcacacgcg ttgccaaacg cagcgcagga
     7741 tacgcctgtt tccgtatcag cgcggcatag acatacaggc acagcagcag aaacagaacc
     7801 ggcgcgccga aagtcagcac aaacatcact tcggccaaaa aaccataatc ctgaaacacc
     7861 atcaggcgca tcatctcggg cagcgaaagg acggatgccg cacccggtat cccgacctcg
     7921 atatacgtca tactgtaagc aaacgccatc aaaatcagcg aagccgccgc ataggcgggc
     7981 ggaccggaaa aagggtggct gcccaccctg aagagtttgt gtccgcaacg gggacagaac
     8041 gccgcctctc ccttgtccaa ctggggcacg tctgtacggc agccgcattc cgggcaatct
     8101 accgtatgcg gcggcagggc ttcgtcgcgg cagttgccgc gaaggctgtg ggggatattt
     8161 tcggcaaacg gcttcatcgg gaaagtggca aatataaatg gcggcattat aaaggaaaaa
     8221 aagcgataca cccaatcagg atgcaaaacc ggcaggttcg gcagtatgaa caaacccttg
     8281 gtgtccggca aaaatatttt ttgagcggct gcccctccgg ccgacaagcc tatttgataa
     8341 aaccccgatt ttgtaaataa tcataaaata cccgcttaaa aatataacgc aaatgatatt
     8401 ttttcgtaaa atatgtgata ataaatttcg tttatgattc tttattattt ttgtatgcgg
     8461 gcaagtccgg attttgcccg caccgcatcc ttatccctta ccgacaaagg agaacttatg
     8521 agcgaaaccg aaaaccaagc cctgacgttt gccaaacgcc tgaaggcgga taccacggcg
     8581 gttcacgaca gcgtggataa cctcgttatg tctgtccaac cgtttgtcag caaagaaaac
     8641 tacatcaaat ttttgaaact gcaatccgtg ttccacaaag cggttgatca tatctataaa
     8701 gaccccgagt tgaacaaagc catttccgag ctggaataca tggcgcgata cgatgccgta
     8761 acgcaagact tgaaagactt gggcgaagag ccttacaaat tcgacaaaga attgccacac
     8821 gaaaccggca acaaagccgt cggctggctt tattgcgccg aaggatccaa tttgggcgcg
     8881 gcatttttgt tcaaacacgc gcaaaagctg gattacaccg gcgaacacgg cgcgcgccac
     8941 ctcgctccgc atccggacgg gcgcggcaaa cactggcgcg ccttcgtcga gcacctgaat
     9001 gccctgaact taactccgga agcagaagca gaagccattc aaggcgcgca ggaagcgttt
     9061 gctttctata aagtgattct gcgtgaaacc ttcggtttgc cggaaggaac agaagccccc
     9121 gaaggcatga tgccgcacag acattaaaaa tggggctgta ctagattatc cctaaattcc
     9181 acacc
//
LOCUS       DAXFZM010000085         8918 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.085, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000085 DAXFZM010000000
VERSION     DAXFZM010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8918)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8918)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8918
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.085"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(83..499)
                     /gene="dksA"
                     /locus_tag="ACFJAG_001778"
     CDS             complement(83..499)
                     /gene="dksA"
                     /locus_tag="ACFJAG_001778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0019899 - enzyme binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-binding protein DksA"
                     /protein_id="HFC3981015.1"
                     /translation="MVKLTEQDILNWIGPEDDYMNDDHLAFFRELLVKMQDELIENAS
                     VTTGHLQEHESAPDPADRATQEEEYALELRTRDRERKLLSKIQATIRNIDEGDYGFCA
                     DTGEPIGLKRLLARPTATLSVEAQERRERMKKQFAD"
     gene            complement(647..1456)
                     /gene="proC"
                     /locus_tag="ACFJAG_001779"
     CDS             complement(647..1456)
                     /gene="proC"
                     /locus_tag="ACFJAG_001779"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004735 - pyrroline-5-carboxylate
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HFC3981016.1"
                     /translation="MNRVEIMNVYFLGGGNMAAAVAGGLVKQGGYRIHIANRGAEKRE
                     RLEKELGVETSATLPELHSDDVLILAVKPQDMEAACKNIRTNGALVLSVAAGLSVGTL
                     SRYLGGSRRIVRVMPNTPGKIGLGVSGMYAEAEVSETDRRIADRIMKSVGLTVWLEDE
                     AQMHSITGISGSGPAYVFYLLDALQNAAIRQGFDMAEARALSLATFKGAVALAEQTGE
                     DFEKLQKNVTSKGGTTHEAVEAFRRHRVAEAISEGVCACVCRSQEMERQYQ"
     gene            complement(1487..1894)
                     /locus_tag="ACFJAG_001780"
     CDS             complement(1487..1894)
                     /locus_tag="ACFJAG_001780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HFC3981017.1"
                     /translation="MEIRVIKYTATAALFAFTVAGCRLAGWYECSSLSGWCKPRKPAA
                     IDFWDIGGESPLSLEDYEIPLSDGNRSVRANEYESAQKSYFYRKIGKFEACGLDWRTR
                     DGKPLVERFKQEGFDCLEKQGLRRNGLSERVRW"
     gene            complement(1894..2580)
                     /locus_tag="ACFJAG_001781"
     CDS             complement(1894..2580)
                     /locus_tag="ACFJAG_001781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HFC3981018.1"
                     /translation="MTVLQERYREVSDRIGKLVLQAGREPHSVGLIAVSKTFPSDGIR
                     EVYAAGQRDFGENYIQEWYGKTEELADLTDIVWHVIGDVQSNKTKFVAERAHWVHTVC
                     RLKTAVRLSRQRRSLMPPLQVCVEVNIAGEAAKHGVAPEEAVALAVEVAKLPNLVVRG
                     LMCVAKANSSETELKTQFQTMQKLLADLNAAGVKADVLSMGMSDDMPAAIECGATHVR
                     IGSAIFGKRG"
     gene            2700..3743
                     /gene="pilT"
                     /locus_tag="ACFJAG_001782"
     CDS             2700..3743
                     /gene="pilT"
                     /locus_tag="ACFJAG_001782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus twitching motility protein PilT"
                     /protein_id="HFC3981019.1"
                     /translation="MQITDLLAFGAKNKASDLHLSSGISPMIRVHGDMRRINLPEMSA
                     EEVGNMVTSVMNDHQRKIYQQNLEVDFSFELPNVARFRVNAFNTGRGPAAVFRTIPST
                     VLSLEELKAPSIFQKIAESPRGMVLVTGPTGSGKSTTLAAMINYINETQPAHILTIED
                     PIEFVHQSKKSLINQRELHQHTLSFANALSSALREDPDVILVGEMRDPETIGLALTAA
                     ETGHLVFGTLHTTGAAKTVDRIVDVFPAGEKEMVRSMLSESLTAVISQNLLKTHDGNG
                     RVASHEILIANPAVRNLIRENKITQINSVLQTGQASGMQTMDQSLQSLVRQGLIAPEA
                     ARRRAQNSESMSF"
     gene            3907..5133
                     /locus_tag="ACFJAG_001783"
     CDS             3907..5133
                     /locus_tag="ACFJAG_001783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HFC3981020.1"
                     /translation="MNTDNLHDILDETVQVYSQKKQSRSETPAEIGAHFHPLLDRLCE
                     TAEAQNASDILISKGFPPSLKINSALTPQPQKALTGEETAAIAASTMNAEQSEIFRRD
                     GEINYSVQSRSGTRYRANAYYSQGSAGLVLRRINHVIPQMRELGLPEKLKDLAVAPRG
                     LLIIVGPTGSGKSTTMATMLEHRNKTLPGHIVTIEDPIEFIYKPRRCIFTQREIGVDT
                     INWQTAVQNAMRQSPDVVCIGEVRSRESMEYAMQLAQTGHLCIFTLHANTAPQSLERI
                     LNFYPKEQHNQILIDIALNLTGIICQRLALKKDKTGRTAVVDLLINTPAIQDFILKGD
                     LMNISKIMETAKTDGMQTMDQNLFELYRHGIISYEEALRQSVSANNLRLHIQLHKEGK
                     TPELLYDRVNGLNLIS"
     gene            5250..7400
                     /gene="yccS"
                     /locus_tag="ACFJAG_001784"
     CDS             5250..7400
                     /gene="yccS"
                     /locus_tag="ACFJAG_001784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YccS family putative transporter"
                     /protein_id="HFC3981021.1"
                     /translation="MKTPLLKPLLITSLPVFASVFTAASIVWQLGEPKLAMPFVLGII
                     AGGLVDLDNRLTGRLKNIIATVALFTLSSLTAQSTLGTGLPFILAMTLMTFGFTILGA
                     VGLKYRTFAFGALAVATYTTLTYTPETYWLTNPFMILCGTVLYSTAIILFQIILPHRP
                     VQESVANAYEALGGYLEAKADFFDPDEAAWIGNRHIDLAMSNTGVITAFNQCRSALFY
                     RLRGKHRHPRTAKMLRYYFAAQDIHERISSAHVDYQEMSEKFKNTDIIFRIRRLLEMQ
                     GQACRNTAQAIRSGKDYTYSKRLGRAIEGCRQSLRLLSDGNDSPDIRHLSRLLDNLGS
                     VDQQFRQLRHSDSPAENDRMGDTRIAALETGSFKNTWQAIRPQLNLESGVFRHAVRLS
                     LVVAAACTIVEALNLNLGYWILLTALFVCQPNYTATKSRVYQRIAGTVLGVIVGSLVP
                     YFTPSVETKLWIVIAGTTLFFMTRTYKYSFSTFFITIQALTSLSLAGLDVYAAMPVRI
                     IDTIIGASLAWAAVSYLWPDWKYLTLERTAALAVCSSGTYLQKIAERLKTGETGDDIE
                     YRITRRRAHEHTAALSSTLSDMSSEPAKFADSLQPGFTLLKTGYALTGYISALGAYRS
                     EMHEECSPDFTAQFHLAAEHTAHIFQHLPDMGPDDFQTALDTLRGELGTLRTRSSGTQ
                     SHILLQQLQLIARQLEPYYRAYRQIPHRQPQNAA"
     gene            complement(8332..8616)
                     /locus_tag="ACFJAG_001785"
     CDS             complement(8332..8616)
                     /locus_tag="ACFJAG_001785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HFC3981022.1"
                     /translation="MQPAVYILASQRNGTLYIGVTSDLVQRIYQHREHLIEGFTSRYN
                     VTMPVWYELHPTMESAITREKQLKKWNRAWKLQLIEENNVSWRDLWFDII"
BASE COUNT         2236 a         2881 c         1911 g         1890 t
ORIGIN      
        1 tcctcttctc ctccggctga tgcgcctttg tgaatatgcc gcctgaaact cggggcttca
       61 gacggcattt tgtttgcctc catcagtcgg caaactgttt cttcatcctc tctcggcgtt
      121 cttgggcctc aacggataaa gtggctgtcg ggcgtgccag cagccgcttc agaccgatag
      181 gttctcccgt atcggcacag aatccatagt ccccttcatc aatattgcgg atggtcgcct
      241 gtattttact gagaagtttt cgttcccgat cccgggtacg gagttccaat gcgtactctt
      301 cttcctgtgt ggcacggtcg gcaggatcgg gggctgattc gtgttcttgg agatgccctg
      361 ttgtaacgga ggcgttttcg atgagttcgt cttgcatttt taccagcaat tcgcggaaaa
      421 aagccaaatg gtcgtcattc atataatcgt cttccggccc aatccaattc aaaatatctt
      481 gttctgtcag ctttaccata atgtatgccc tctcggttca ccgcaaaaaa acaaagcact
      541 acaaagtggc tttattcctt tgatttttat aaggcttatt gcctaaggcg tttttgaaaa
      601 cgcgcatcat aacacgtttt ggattggttt ttttattttc tttacattat tgatattgcc
      661 gttccatttc ctgcgaacgg cacacacagg cacaaacgcc ctcacttatg gcttcggcga
      721 cacgatgccg tctgaaggct tccacggctt cgtgggttgt cccgcctttt gacgttacat
      781 ttttttgaag cttctcgaaa tcttcacccg tctgctcggc aagggcaacc gctcctttaa
      841 acgttgccag actgagcgcg cgtgcttctg ccatatcaaa cccttgtcgg atggcggcat
      901 tttgcaatgc gtccagcaga taaaacacat aagccggccc gctgccgctg atgccggtaa
      961 tgctgtgcat ttgcgcttca tcttccaacc aaacggtcaa accgactgat ttcatgattc
     1021 gatcggcaat cctgcggtct gtttccgata cttccgcttc ggcatacata ccggatacgc
     1081 ccagcccgat ttttccaggt gtattaggca taacccggac aatgcggcgg cttcccccga
     1141 ggtaacggct gagcgtaccg accgacaatc cggctgcgac agaaagcacc aatgcgccgt
     1201 tggtgcggat atttttgcac gcggcttcca tatcctgcgg tttgacggca aggattaaaa
     1261 catcgtcgga atgaagctcc ggcagggttg ccgaagtttc gacccccaac tctttttcca
     1321 aacgttcgcg cttttccgca ccacggttgg ctatatggat gcggtatccc ccttgtttga
     1381 ccaatccgcc cgcaacggca gccgccatat ttccgccgcc gagaaaataa acattcatta
     1441 tttctaccct attcaaaatt accttactaa attcattccc aattttttac catcggacgc
     1501 gctcggacag gccgttgcgc cgcaacccct gcttttccaa acagtcgaaa ccttcctgtt
     1561 tgaacctctc aaccaaaggt ttgccgtcac gcgtacgcca atccaacccg caggcttcaa
     1621 acttccctat tttcctataa aagtaagatt tttgcgcgga ttcatattcg tttgccctga
     1681 cggaacgatt gccgtctgaa agcggtatct cgtagtcctc taaagacagc ggactctcgc
     1741 cgccaatatc ccaaaaatcg atggcggcag gttttctcgg cttacaccag ccggacaagg
     1801 acgaacactc ataccacccc gccagccggc agcctgcaac cgtaaatgca aacaacgcag
     1861 ccgttgccgt atattttatt acccgaattt ccatcagccc cttttcccga aaatcgcgct
     1921 gccgatacgg acgtgtgtcg caccgcactc aatggcggca ggcatatcgt ccgacatccc
     1981 catagacagc acgtccgcct taacgccagc cgcattgagg tcggcaagca gcttttgcat
     2041 ggtctgaaac tgagttttca actccgtttc actgctgttg gctttggcaa cgcacatcag
     2101 tccgcgcacg acaaggttgg gcagcttcgc cacttccacg gcaagcgcga ccgcttcttc
     2161 gggcgcgaca ccgtgttttg ccgcctcgcc cgcaatgttc acctcgacac acacctgcaa
     2221 gggcggcatt aaggagcgac gctgcctgct cagccggacg gcggtcttca gacggcatac
     2281 ggtatgcacc caatgcgcgc gttcggcgac aaatttggtt ttgttggact gcacatcgcc
     2341 gatgacgtgc cacacgatgt cggtcaaatc cgccaattcc tccgttttgc cgtaccactc
     2401 ctgaatatag ttctcgccga aatcacgctg tccggcagcg taaacttcgc ggatgccgtc
     2461 tgaagggaag gtcttgctga cggcaatcag gccgacggaa tgcggctccc tgcccgcctg
     2521 cagaaccaat tttccgatac ggtcggacac ctcacgataa cgttcttgca acaccgtcat
     2581 agatcatccc ctaattaaaa atgattaaac agttgaaacc cctccagtca gggcggtata
     2641 atcaaggttg ttagaatcat tccaaccaat cgaaacatta tactaaacag agccgcatta
     2701 tgcagattac cgacttactc gccttcggcg ctaaaaacaa agcatccgac cttcacctga
     2761 gttcgggcat atcccctatg attcgggttc acggcgacat gcggcgcatc aaccttcccg
     2821 aaatgagcgc ggaagaggtc ggcaatatgg taacttcggt gatgaacgac caccagcgga
     2881 aaatctacca gcaaaacttg gaagtcgact tctcgttcga actgcccaac gtcgcccgat
     2941 tccgcgtcaa cgccttcaac accggccgcg gccccgccgc cgtattccgc accattccca
     3001 gcaccgtctt atcgctggaa gaattgaaag ccccgagcat tttccaaaaa atcgcagaat
     3061 cgccgcgcgg catggtattg gttaccggcc ctaccggttc gggcaaatcg accacgcttg
     3121 ccgcgatgat caactacatc aacgaaaccc agccggcaca catcctgacc atcgaagacc
     3181 cgatcgaatt cgtccaccaa agcaaaaaat ccctgattaa ccaacgcgag ctgcaccagc
     3241 acaccctcag cttcgccaac gcgctgagtt ccgcattgcg cgaagacccc gacgttatcc
     3301 ttgtcggcga gatgcgcgac cccgaaacca tcggcttggc actgaccgcc gccgaaaccg
     3361 gacacttggt tttcggcacg ctgcacacga ccggcgcggc aaaaaccgtc gaccgtatcg
     3421 tggacgtatt ccccgccgga gagaaagaaa tggtgcgttc catgctgtcc gaatcgctga
     3481 ccgccgtcat ctcccaaaac ctgctgaaaa cgcacgacgg caacggccgt gtcgcctcgc
     3541 acgaaatcct gattgccaac cccgccgtcc gcaacctcat ccgcgaaaac aaaatcacgc
     3601 agattaactc cgtcctgcaa accgggcagg cgagcggtat gcagacgatg gaccaatcgc
     3661 tgcaatcgct ggtgcgccaa gggctgatcg caccggaagc cgcacgcaga cgcgcgcaaa
     3721 acagcgaaag tatgagtttc tgacacacaa ccgccttccg gccataccgg cgggaaaaca
     3781 aggcgcaaac acgccgggcg ggacgcggca tcccgcccgg catacccttc cgaacaggaa
     3841 gcgtccgcct tcctgttgaa acctgccgcc gcaaactgca aggcttaaac cgaaaagaag
     3901 ctaacgatga ataccgataa cctgcacgac atcttggacg aaacggttca agtgtattct
     3961 caaaaaaaac aaagccgatc cgaaaccccg gccgaaatcg gcgcacactt ccacccgctg
     4021 ctcgaccgcc tgtgcgaaac cgcagaagca caaaacgcgt ccgacatcct tatcagcaaa
     4081 ggattcccgc cctcgttgaa aatcaacagc gcattaaccc cgcagccgca aaaggctctg
     4141 acgggcgagg aaaccgccgc catcgccgca tcgacgatga acgccgaaca atcggaaata
     4201 ttccggcgcg acggcgaaat caactactcc gtccaatcgc gcagcggcac gcgctaccgc
     4261 gccaacgcct actacagcca aggcagcgca ggtttggttt tgcggcgcat caaccacgtc
     4321 atcccgcaaa tgcgggaatt gggcttgccc gaaaaactca aagacctcgc cgtcgcaccg
     4381 cgcgggctgc tgattatcgt cgggcctacc ggttcgggca aatccaccac gatggcgact
     4441 atgctcgaac accgcaacaa aaccctgccc ggccatatcg ttaccatcga agacccgatt
     4501 gagtttatct acaaaccgcg ccgctgcatc tttacccagc gcgaaatcgg cgtcgacacc
     4561 ataaactggc agacggcggt acaaaacgct atgcgccaat ccccagacgt ggtctgtatc
     4621 ggcgaagtcc gcagcaggga aagtatggaa tacgcgatgc agctcgccca aaccggccac
     4681 ctgtgcattt ttacgctcca cgccaacacc gcgccgcagt cgctcgaacg catactcaac
     4741 ttctacccca aagaacagca caaccaaata ctgattgaca tcgccctcaa tctgaccggc
     4801 atcatctgcc aacgcctcgc cctcaaaaaa gacaaaacgg gcaggacggc ggttgtcgac
     4861 ttgctcatca acacgcccgc catccaagac ttcatcctga agggcgacct gatgaacatc
     4921 agtaaaatca tggaaaccgc caaaaccgac ggaatgcaga cgatggacca aaaccttttc
     4981 gaactgtacc gtcacggcat catcagttac gaagaagccc tgcgccagtc cgtttccgcc
     5041 aacaacctgc gattgcacat ccaactgcac aaagaaggca aaacgcccga actcctttac
     5101 gacagggtca acggtctcaa cctcatttcc tgatccgcaa aacccaatgc cgtctgaaaa
     5161 ccgcatcccc gttttcagac ggcatgattt tatccgcccc attcatgtgc cacactttat
     5221 tcacttcata acaataaacc ggtaaaacca tgaaaacccc actcctcaag cctctgctca
     5281 ttacctcgct tcccgttttc gccagtgtct ttaccgccgc ctccatcgtc tggcagctag
     5341 gcgaacccaa gctcgccatg cccttcgtac tcggcatcat cgccggcggc ctggtcgatt
     5401 tggacaaccg cctgaccgga cggctgaaaa acatcatcgc caccgtcgcc ctgtttaccc
     5461 tctcctcgct cacggcgcaa agcaccctcg gcacagggct gcccttcatc ctcgccatga
     5521 ccctgatgac cttcggcttt accattttag gcgcggtcgg gctgaaatac cgcaccttcg
     5581 ccttcggcgc actcgccgtc gccacctaca ccacgcttac ctacaccccc gaaacctact
     5641 ggctgaccaa ccccttcatg attttatgcg gcaccgtact gtacagcacc gccatcatcc
     5701 tgttccaaat catcctgccc caccgccccg tccaagaaag cgtcgccaac gcctacgaag
     5761 cactcggcgg ctacctcgaa gccaaagccg acttcttcga ccccgatgag gcagcctgga
     5821 taggcaaccg ccacatcgac ctcgccatga gcaacaccgg cgtcatcacc gccttcaacc
     5881 aatgccgttc cgccctgttt taccgtttgc gcggcaaaca ccgccacccg cgcaccgcca
     5941 aaatgctgcg ctactacttc gccgcccaag acatccacga acgcatcagc tccgcccacg
     6001 tcgactacca agagatgtcc gaaaaattca aaaacaccga catcatcttc cgcatccgcc
     6061 gcctgctcga aatgcagggg caggcgtgcc gcaacaccgc ccaagccatc cggtcgggca
     6121 aagactacac atacagcaaa cgcctcggac gcgccatcga aggctgccgc caatcgctgc
     6181 gcctcctttc agacggcaac gacagtcccg acatccgcca cctgagccgc cttctcgaca
     6241 acctcggcag cgtcgaccag cagttccgcc aactccgaca cagcgactcc cccgccgaaa
     6301 acgaccgcat gggcgacacc cgcatcgccg ccctcgaaac cggcagcttc aaaaacacct
     6361 ggcaggcaat ccgtccgcag ctgaacctcg aatcaggcgt attccgccat gccgtccgcc
     6421 tgtccctcgt cgttgccgcc gcctgcacca tcgtcgaagc cctcaacctc aacctcggct
     6481 actggatact gctgaccgcc cttttcgtct gccaacccaa ctacaccgcc accaaaagcc
     6541 gcgtgtacca acgcatcgcc ggcaccgtac tcggcgtaat cgtcggctcg ctcgtcccct
     6601 acttcacccc ctccgtcgaa accaaactct ggatcgtcat cgccggtacc accctctttt
     6661 tcatgacccg cacctacaaa tacagttttt ccaccttctt catcaccatt caggcactga
     6721 ccagcctctc cctcgcaggt ttggacgtat acgccgccat gcccgtgcgc atcatcgaca
     6781 ccattatcgg cgcatccctt gcctgggcgg cggtcagcta cctgtggcca gactggaaat
     6841 acctcacgct cgaacgcacc gccgcccttg ccgtatgcag cagcggcaca tacctccaaa
     6901 aaattgccga acgcctcaaa accggcgaaa ccggcgacga catagaatac cgcatcaccc
     6961 gccgccgcgc ccacgaacac accgccgccc tcagcagcac cctttccgac atgagcagcg
     7021 aacccgcaaa attcgccgac agcctgcaac ccggctttac cctgctcaaa accggctacg
     7081 ccctgaccgg ctacatctcc gccctcggcg cataccgcag cgaaatgcac gaagaatgca
     7141 gccccgactt taccgcacag ttccaccttg ccgccgaaca caccgcccac atcttccaac
     7201 acctgcccga catgggaccc gacgactttc agacggcatt ggatacactg cgcggcgaac
     7261 tcggcaccct ccgcacccgc agcagcggaa cacaaagcca catcctcctc caacagctcc
     7321 aactcatcgc ccggcagctc gaaccctact accgcgccta ccgacaaatt ccgcacaggc
     7381 agccccaaaa cgcagcctga aaaaatttcg gcattttgta aaggggggcg gattgtcagg
     7441 caggttgcaa gatagtggat aaggctttgc gcagggtaaa tgcgtagcaa ctgaaccgtc
     7501 attccctcaa aaacagaaaa ccaaaaacag aaacctaaaa tcccgtcatt cccacgaaag
     7561 tgggaatccg gttttttgag tttcagtcat tcccgataaa ttgccttagc attgaatgtc
     7621 tagattcccg cctgcgcggg aatgacggta gagcggtttc tgttttttcc gataaattcc
     7681 taaaactcaa aatttcatca ttcctacaaa aacagaaaat caaaaacaga aacctaaaat
     7741 cccgtcattc ccacgaaagt gggaatccag aatctctaaa gcttcagcta acctttgaat
     7801 attgctgttg ttctaaggtc tggattcccg cctgcgcggg aatgacggcg gagcggtttc
     7861 tgttttttcc gataaattcc taaaactcaa aatttcatca ttcctacaaa aacagaaaac
     7921 caaaatcaga aacctaaaat cccgtcattc ccacgaaagt gggaatccag aacgtaaaat
     7981 ctaaagaaac cgttttacct gataagtttc cgtaccgaca gctctagatt cccgcctacg
     8041 cgggaatgac ggcggagcgg tttctgtttt ttccgataaa ttcctaaaac tcaaaatttc
     8101 atcattccta caaaaacaga aaaccaaaat cagaaaccta aaatcccgtc attcccacga
     8161 aagtgggaat ctaggtctgt cggcacagaa acttatcggg taaaacggtt tctttagatt
     8221 ttacgttcta gattcccgcc tgcgcgggaa tgacggttta gaagttgccc gaaacctcaa
     8281 aaaaaaccga aaccgaacaa gccggattcc cgcctgagcg ggaatgacgg gctaaataat
     8341 atcaaaccat aaatcccgcc aagaaacatt attttcttca atcagttgca atttccaagc
     8401 cctgttccat ttcttcaact gtttttcccg agtaattgcg ctctccatcg taggatgcag
     8461 ttcataccaa accggcatag taacgttgta ccgtgatgta aatccttcaa tcaaatgctc
     8521 cctatgttgg taaatacgtt gcaccaaatc agatgtaacg ccaatgtata acgtgccatt
     8581 acgttggctt gctaaaatat aaaccgcagg ctgcatataa tacccttttg aattatttaa
     8641 atttatattc ccgcgaacac catccggtga ttactttaac ccttcgttat ccccatagct
     8701 ttccatcatt cccgcaactc ttcgtcattc ccgcgaaagc gggaatccag aatctctaaa
     8761 gcttcagcta acctttgaat attgctgttg ttctaaggtc cggattcccg cctgcgcggg
     8821 aatgacggcg gagcggtttc tgttttttcc gataaattcc taaaactcaa aatttcatca
     8881 ttcctacaaa aacagaaaac caaaatcaga aacctaaa
//
LOCUS       DAXFZM010000086         8466 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.086, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000086 DAXFZM010000000
VERSION     DAXFZM010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8466)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8466)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8466
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.086"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..238
                     /locus_tag="ACFJAG_001786"
     CDS             <1..238
                     /locus_tag="ACFJAG_001786"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981023.1"
                     /translation="SFGGIIILFYIIIAGICPYCHEFQKMNYGTSVGIGSDSFTFFKG
                     ISPVPKIDYCSKCGKPLSPEAVNKVMNDKTDEEM"
     gene            complement(409..2151)
                     /locus_tag="ACFJAG_001787"
                     /pseudo
     CDS             complement(409..2151)
                     /locus_tag="ACFJAG_001787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009119804.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0046930 - pore complex [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006811 - monoatomic ion transport
                     [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
     gene            complement(2369..8442)
                     /locus_tag="ACFJAG_001788"
                     /pseudo
     CDS             complement(2369..8442)
                     /locus_tag="ACFJAG_001788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227067.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin repeat-containing protein"
BASE COUNT         1854 a         1981 c         1983 g         2648 t
ORIGIN      
        1 cagtttcgga ggtatcataa ttttattcta cataatcatc gcaggaatct gcccctattg
       61 ccacgaattc caaaagatga attatggcac ctccgtcggc atcgggtcgg atagctttac
      121 tttctttaaa ggcatttccc ctgtcccaaa aatcgattac tgcagcaaat gcggtaagcc
      181 cctgtctcca gaagccgtaa ataaggtgat gaatgataaa accgatgaag aaatgtgaac
      241 agcgttttaa caacagtgaa ataaaatata aaatttcaat tttaaaataa tgagctaatg
      301 gaaatttgac ccggttgtcc ggtacagccc caaacataaa acaaaagctg cctgcaaaaa
      361 accggcagct tttgtgcatc ttgtcataca ttattcactt caaccgcatc aaaacgaata
      421 acccacctga aaccccgtta cccatttctt cgtctgaaaa tattcgggct ttttcaatgc
      481 acggccggta aatatatcgt aatgcaggtt gccgccaagc tttatctgcc cgcgtatccc
      541 aattgctgtg ccggctagag tttggcccga taaccatttg gcggattgtc ctgaaacatg
      601 tcctacatca gccccaagat aaagctgatg gcctggttta aattgccagc tcaaatcgtt
      661 gcgccaatac catccccgct cggcaggcaa actcatttca ccgtcgaagc cacgtacggt
      721 gtggtgtccg ccgatagcca gtttgtcttg cgatgttagc ggggttttgt tccattgtgc
      781 atgaacggat gtgtcatagg caaatagctg tttaccgatt tgaaaaggag tatttacatc
      841 agccgatgcc gtccaaattt tcatacgtga cgtgccttcg ccaaaggctt cttcaggcgc
      901 gcgcagagca tctttcatgc cggtgccgtg tttatatttc aacttaaaat ctgccgtact
      961 gcgaccgata tatcctttgt gggaaagttc tgccaaccaa cctgtggttt tacgccgttg
     1021 tacagtcagt tcggcatcat caatgtaact ttttgtttcc ctcgtccaca gttttacact
     1081 gagataggtt ttgcgtttgg catcacgata caacaggcgg ttgaagccga aatcagtgtt
     1141 gtaacttttt ccattatagt catagacttc cgataatccg aaaaccgcct gatggtaacg
     1201 gtagccattg tgattgaatg cccatgtcca tttaccgaaa ggggctgaat aatgtacggc
     1261 gtaattgttt gatccgcctt ctttgcgatg gccgtcaaaa ttttcctcat cgggcgtacc
     1321 gccaattgaa cgtccataat ttacatagaa catatcactc agtccaaaag gattgtcggc
     1381 agagaaagtg atatttcctt ggtattttcc tgtcgcctca ctacccgaat tatccatccc
     1441 cacactcaca cagtagggca gcagacgtta ccgccattgc accacgacat cactttggtt
     1501 tggttctctc tctacgggaa cgatttggag atcggcttcc gcagtcggga gacatttgag
     1561 attttccagt ccttgttcca aatcacgcag attcaacaga tcgttcgagc gggtgggaaa
     1621 tttgttttgg aatgctgcaa tacgtcctgc atgggtttga tcatcgttgg accgatcgat
     1681 tcgtatggag cgcagatagc ccggcatcag ggttaattga agcttgccac tattcaaatc
     1741 ctgtggcgca gccaagatac gggtcgtggt atatcccctg ccgatcaaag cattttgtgc
     1801 taaggacatg atttgattaa tgtcgcccgc atgcagacac ttgccggaaa caaaatgtgt
     1861 ttggcacaag gcatggttga gcgcaaaccg gaatttagcc gcttcttcac ccaccaattc
     1921 cacctcagaa ataggaaagc aggggcttgc ctcatccgaa tttgcaccgc ctacctgtgt
     1981 tgccatcttc tctatgcccg tatcggtacc atccaaacga acatcttgtt ccggctgcat
     2041 ctgttcacgc aattgcttct cacgttgacg ttggagaata tcctgttgtt gtgaaacagc
     2101 ttcaggtgtg ggggcggctg atgttagggt ggggaggcag ccatcaatga taggactaac
     2161 agtgataagg gatagggatg aaatacattt ttggaggaaa agaaaggttt cataggattg
     2221 gtctaagtaa tgtaagcggg caattatagc aatgcacaaa aacaaacaaa aagataaaaa
     2281 aactccataa atgaaaattt aatcacatgt ttataggata tgaaaaagag gaagcgaaat
     2341 ctgaagccgt ctgaaaacaa ccccacacag catcggcgga cgagtttccc tcagctgctc
     2401 cggcagccgt acccagcatc cttgtaatcg ccgaaacggt ctctttttcc tccgcattca
     2461 ggctgccgcc gtctcctttg ccgtacagcc atttgccgat gattggggcg gccgcttccg
     2521 acccgcccgc acccaatgct cctgccgggg cattgttgcc tcatgctgcg gcaaccgctg
     2581 ctcctaatac cgcgtgggca agaacgtgag cggtttcttg actggcggtt agtttgccat
     2641 tcgcgttttg accggctaaa tctttaaagt gctgtccaat cgcatacgat acgtctggcg
     2701 atgcggtagc cgcagcgatg cccgctccgc tttgggtcgg ctcagctaaa cctgaggcta
     2761 acatgttgag aatgactttg ccttgttgcc aattatctgc ttttgctgcc gcatcttgag
     2821 cttcatgggc tttgcgtttg gcagtttcca tatcgccatt ggctaatgcc tcggctgctg
     2881 ctgtttcggc tgcttctttg tctgctttga gtttgtctaa atgttggtta atctcggtat
     2941 tggtttgttg aacattttta ctaaaatctt ggctgacggt tctttgtaaa tccagttcac
     3001 tttgcactct atctttgtca aatatgtttt tcaggctgcc cgaatgtcgt tcggcggtgt
     3061 ctgtggttac gtttgtatca atatcggctt tggtttgtgc cgctattttg cctgtcagcc
     3121 tgatttgtgc ggcttcgtct gtgatttgaa tgtttttggg tattgatgcc gctttttgtg
     3181 atgctgcttt gactgtcgct gtcgctgccg taccctactg atgaacttgc gccgttttta
     3241 tcggctatgc ttgtcaggtg tttgtcttga ggtttatttt ttgcgccctg tcccagtgtt
     3301 ttgccgctta cggcaacgct ggcacccaat ccaaaacttt ttccttcgta ttggctgtaa
     3361 ttttgaatat cactgccggc gagtgtgcct gtgctgaatc ggtttttacc cttgtctttt
     3421 gcgctttggc tgctggtgat gatgccgcct ttgaggcctg tatggtttcc gaccttgatt
     3481 tgatagctgt cttctccggc ataaataccg ctttgctcgg ttaccgaagc atggtcggct
     3541 cggattttgc tttggctgta atcgccactg gcactgaagc cataacctac ggtaacttgt
     3601 gcaccggcgt tttgttgttt gctttgataa gtttctctat cttgtacact ttgaatgctt
     3661 aggtttttgg cattgacttg tacgcctttg ccgcgtactt gcgcgccttt gatgatggta
     3721 tcgccaccac tttggataag ggtttggctg cctttgtcgc caatatggct atggcggtgg
     3781 gttacgctat cgccattgcc gtagcctttg ccgacattgc cgcctgcggc aacgcctaat
     3841 gaccagcctc cttgtccgaa tgatacggca gcacctgcgt tccagcctgc tgatttgttt
     3901 tggctgcgtt cggtattgct ttgctcggct gattgcagat ggatttgctt atcggcaatc
     3961 aggccggttc ctgctctgcc tgaaacacct gagcctgtga tgttgatatt ggattgttcg
     4021 ccgcaccttc ggcaataagg gtagttttgc cgcctgcttg aatttgactc gcttgggctt
     4081 gattggcttg aacttgggtg gtttgtcggt tttgctgttc gccgtaggtt atggagatgc
     4141 tgacttgttt ggcattggtt gtaccattgg ctaagttttg tgcgcctttg cctgtttgat
     4201 aggcctgcca acctgcattg gcagccgcca tggcattaac gcggtcgttt ttgctttgtc
     4261 cgacttgttt gctgctttgt gtgctacggc aatcgcttgt tgtgccaaat cggtaacggg
     4321 cgaactgaat gccaccgtta agcctttttg ttcgtaggtt tgggtggttt tgctgtttaa
     4381 ttggttttgt gctgcgccaa tatccatact ttgcgtgctg ataaggttgt tgccctcagg
     4441 gctggaaacg ttgctgccgg tttgttcgta gtgtttgctt gcaacaatgg tggtatcgcc
     4501 tttcaggctg cctacggtac tgcctgtatg ttcgttgctt tgggattggt tttcttgtgt
     4561 gtttgtcttg ctgccaatag tgaagctgat acctgcactc atcaatcctg atttttgggt
     4621 ttgatgatag gtttcgcttt ggctttgagt ttgggttgta ccaatgcgaa catgattgcc
     4681 tgcttgaatc cgggtgccat tatcggaaat aacattactg ccaaggatgt tggcatcgtt
     4741 tcctgcctgc aatacaactt gcttgccttc aaaggtgctg ctttgagcag tttcgtgatg
     4801 actttgggct ttatcggtaa tgactaattt attaccgccg ccgcttctgc ctgtatgttt
     4861 ggacgcatca tcaacttggc cggcatggat gcctgagctg atagtaatgt catttttagc
     4921 atacacggca agtgtgcctt ttgcgctgcc gacttcggca gctttggcat tgagattatt
     4981 ccctgacaat agggtaacat cgccttttgt ttgaatgctg ctgccgactt cgttcgttga
     5041 acctcggatg gtatggttat cggcatcaaa atggatttct tgatatttgc cggtttgtac
     5101 cgtatccagg ttaatgtcgc gtcctgcctg cagccgggtt tgcccttgat ctgattgatt
     5161 gctgatttga ccggcaatga tgttgatgtc tttgcctgcc tgcgctgcta aaacaccttt
     5221 ttctttgcct gtgatataaa tacctgccat tcggtctagg taggtgctgc taccttgtgc
     5281 attttgactg ctcttggccg tgctttggtt gttgatgttg ttacccgcat tgagcaataa
     5341 tgtctgttcg gcagaaagaa tgccgccaat attattgatg tcttgtgtgg ccgtaaccgc
     5401 tgatttttgc gcatgaatac gcccaccgat attgtctagc gtatcggtat tgataataag
     5461 cgcattgcgc cctgcaatcg tgcctgagtt tttcaggctg cctgaaacat tgatttgtgt
     5521 attgctgcct gacaacaatg cacctttacc gtctatgtcg ccatttttaa cgcgtacata
     5581 aacctgtggc atcaatacgg tttgtgtgcc gccatcagga agtttaactt ctttttgtac
     5641 caaccaaaca atatcgctgg tcagttgcgc tgcttgctcg gcacttaatg caatgccaac
     5701 gctgagattc atcgaacgtg ccgcagtcgc gccattatcc attaaggctt taaattgttc
     5761 ttcgtcgttt tgataaccgt ctaaacgacg atgccctgtc agctctgcga tttgttcatt
     5821 gattaaacgt tgctcgtaat aaccatcacc caaacgttta tgtaaattgt ttgggtctag
     5881 tttgaggctg cccagcatat agtcactacc caaccattga cggtagttgg caaagcgtgg
     5941 atcggtttca acaagatagc ctttattggc aggattgata atgtataagc tgctgccggg
     6001 taatggggta aaagaattgg gcgtataggg tagcgaaata ccgttgcttt tcgcagtacg
     6061 gatattatcc cggttacttt gtggcaactc agtgccttgg ctgggcgcat gacggcttaa
     6121 tgctttgcta tgcgattcat aggcaaatga acccagtgaa atgtcgcgtg tgatttcctc
     6181 cggcaaagta taattttgtt cacgatgccc tgtttcatca tgtcctttac gacgcgcacg
     6241 ccagtagttg tgcaacttac cattttcgct gaagactttc ttctcgccaa aggtttgctc
     6301 gttatgcaaa ccgtcttttt ctgtttgcac aagcaattgc cgccggcaat gattcggctg
     6361 tcgctgttga agactgcttt gctatcaata atcaaatcgc tacctgcaat gattttagca
     6421 ggcgcagttc cggttacttg agtttcttgc gttacttttt cataatcgta tttatgccaa
     6481 ttttcatgcg ccactccatc aggggtgcgt aagtggtctg attcattgtt gtagacaaac
     6541 cagcctaatt catgttgcgt gccttctcgc aataattcgt gtcgtccaaa tgcttcgtaa
     6601 tcaacaatac gctcgcgccc tgtttctacc aactgcgttt tcaaatgctc attggtattg
     6661 tgcagctttt ctacacctaa acgcattttg cctgcagctt caatgattgc gccggcattg
     6721 tgtatccttt gggctttgcc tgtggcttgg tcattggtat ctaatgcgcc gccaaccgcc
     6781 atatcgttac cgctgtaaat cagactgttt tcacggttat ttaattgttc aatgcctaaa
     6841 ttcaggtttt cgcgtgccgc aatggcggca cctgtaccgt tttcatcttg attgtctaag
     6901 cgggtagccg caatagcgat attgtcgcca taaatccgac ctgtaccgat attattcatt
     6961 tgcccggctt ggattttggt ttgttgtccg tcaatcaagc ctctattggt taaattgtgc
     7021 tgcgtgccaa tgtctgtcgt accgccggat tgaatgttgc cttgtactgc attatcaagg
     7081 ttatttgctt taatccgaat gcgttttcct gcttgcaagg tatgtgaatt tttcaggctg
     7141 cctcgtgtac tgagcgacaa ttcattgccc gccacgatct tgcgttctac ataaaaatca
     7201 tcttgtaacg caatatccag tttattatca gcggcaagtg tgccgttgtt ggataacgat
     7261 tttgcctgaa tggcaacatc acggcctgat tgtatcgtgc cattcgtatt atcaatgaca
     7321 acggtagatt gctgaccatc gtgaataatc agttgttgat tggtcgctat ttcgccattt
     7381 tgattgttca ggctgcctga aacggctaaa tcctctgttc ctgccgacaa taatttgcca
     7441 gtgttttgaa tcgattgact gtgaatttga gtgccttgtt gcgataccgc cgtaccgctg
     7501 ttttcaaagg cttgactgcg gatattgact ttgtgttccg ctgtattatt catatcttgc
     7561 acattggcgg cagccatcgt gccactattg accaaacggc catttgcatc aatcgccaca
     7621 ttaccggaag aagcaaacaa ctgcccttga ttacgaatgc ctgcttgttc ggccgtactg
     7681 atcaaggtga ttttgttggc atacaagaat acgtgtgaaa tcggtatcac gggcatccaa
     7741 accgtgtccg gcgattacaa cattgccttg ccttatctta aagccactaa agtctcctgc
     7801 ttgatattgc ggttggcctg tcgtcaaagt ggcacgggaa gcattgataa aaccaccacc
     7861 attgactgca atccctgccg gattggcaat aacgacttct gcacgtcgtc cacccacttc
     7921 aatatagcca ttcagttgtg aaggatggct gctgttgatt tggtttacaa ccacacgtgc
     7981 ttcgcccctt gtcaaccaag gattgccttg aatccaaccg cctagctgtg tttgggtgtt
     8041 gctgcgactg ttgtttaaaa tcgccccgcg attacccaca tcaaactggg catattgatt
     8101 aacagaaacc cctgccgaag taggggtttg aatattgact tgcggtatgc cgttacctgt
     8161 ttgcagaatc gtggcttgtt gggttttagg agcagcttta tcagtaataa tgccgtcagc
     8221 aaaagcaata ttgaccgtac ccaaagccaa acataaagaa aagcctaatg cagaaaaaca
     8281 aaaggctttg gaatgagtag gaatgaaaga aacggatttc acataaacgc tgcccgaacc
     8341 actatcggca cagcttttac cttcgcgctt ggtggtttcg gcaacagcta ccacagcacc
     8401 gcgtttgcgg ttgaaaatca cacgatagag ggttttgttc atgattttag ttatttgatt
     8461 tttata
//
LOCUS       DAXFZM010000087         8337 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.087, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000087 DAXFZM010000000
VERSION     DAXFZM010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8337)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8337)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8337
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.087"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            566..970
                     /locus_tag="ACFJAG_001789"
     CDS             566..970
                     /locus_tag="ACFJAG_001789"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HFC3981024.1"
                     /translation="MTAQPCPICTAQDEDILLQTPKLRVIAVHNDSGSPAFCRVIWHG
                     HIAEITDLSAAERGELMEMVYKVEAAMRQVFRPAKINLASLGNVVPHLHWHIIARFEN
                     DATFPAPIWANPVRKHGMTLPQNWTEQLKKLL"
     gene            1010..2191
                     /locus_tag="ACFJAG_001790"
     CDS             1010..2191
                     /locus_tag="ACFJAG_001790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LD-carboxypeptidase"
                     /protein_id="HFC3981025.1"
                     /translation="MTEPTSRRRFLKTCTAAGAGLLQACGTSATSVPPLPSSHSVVKA
                     RTVPLQTPRRQSSDGNLLRVVASSGFAEDTNRVNTALTRLYNAGFTVTNQQAGSRRFQ
                     RFAGTDAQRAADFQEVASGRVATPKVLMGLRGGYGAARILPHIDFASLGARMREHGTL
                     FFGFSDVCAVQLALLAKGNMMSFAGPMAYSDFGKPAPGAFTMDAFIKGTTQNRLTVDV
                     PYIQRADVETEGTLWGGNLSVLASLAGTPYMPDIDGGILFLEDVGEQPYRIERMLNTL
                     YLSGILGKQRAIVFGDFRMEKIRDLYDSSYDFSAVAKHISRTAKIPVLTGFPFGHIAD
                     KITFPLGAHTRIRMNGNGGYSVAFEGYPTLDASALTLDTLLPPPDLPIFPESGVADIS
                     E"
     gene            complement(2294..4549)
                     /locus_tag="ACFJAG_001791"
     CDS             complement(2294..4549)
                     /locus_tag="ACFJAG_001791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitric-oxide reductase large subunit"
                     /protein_id="HFC3981026.1"
                     /translation="MGQYKKLWYLLFAVLAVCFTILGYMGSEVYKKAPPYPEQVVSAS
                     GKVLMTKDDILAGQSAWQTTGGMEVGSILGHGAYQAPDWTADWLHRELSAWLDLTAQQ
                     AYGKKFDEVSPEEQAVLKTRLADEYRNQSRIKEDGSVVISDTRVKAIESILPYYHGVY
                     GDDPKLQTTREHFAMKNNTLPSQEAREKLFDFFFWTSWSASTNRPGEVFTYTNNWPHE
                     PLINNVPTTENYMWSFTSVVLLLMGIGLLMWGYSFLTKHEEVEVPSEDPISKIQLTPS
                     QKALGKYVFLTVALFVVQVLLGGLTAHYTVEGQGFYGIDEALGFEMSDWFPYALTRTW
                     HIQSAIFWIATGFLTAGLFLAPIVNGGKDPKFQRAGVNFLYIALFIVVGGSYAGNFFA
                     LTHILPPEFNFWFGHQGYEYLDLGRFWQLLLMVGLLLWLFLMLRCTVSAFKEKGVDKN
                     LLAIFVASMVGVGVFYAPGLFYGEKSPIAVMEYWRWWVVHLWVEGFFEVFATAAFAFV
                     FYNMGFVRRSTATASTLAAAAIFMLGGVPGTLHHLYFSGSTSASMAIGACFSALEVVP
                     LVLLGREAYEHWSYQHLSDWAKRLRWPLMCFVAVAFWNMIGAGVFGFLINPPISLFYI
                     QGLNTSAVHAHAALFGVYGFLALGFVLLVARYLKPNARFDDKLMTWGFWLLNGGLVGM
                     IAISLLPVGVIQAYASITHGLWYARSEEFLQMEILDTLRWVRTAPDLIFIGGAICVAI
                     QATKIVFGRDK"
     gene            4922..6100
                     /gene="nirK"
                     /locus_tag="ACFJAG_001792"
     CDS             4922..6100
                     /gene="nirK"
                     /locus_tag="ACFJAG_001792"
                     /EC_number="1.7.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0050421 - nitrite reductase (NO-forming)
                     activity [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="copper-containing nitrite reductase"
                     /protein_id="HFC3981027.1"
                     /translation="MKRQALAAMIASLFALAACGGEQAAQAPAETPAASAEAASSAAQ
                     ATAETPAGELPVIDAVTTHAPEVPPAIDRDYPAKVRVKMETVEKTMKMDDGVEYRYWT
                     FDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAATGQGGGAAATFTAPGRTST
                     FSFKALQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEGLPKVDKEFYIVQGDFYTKG
                     KKGAQGLQPFDMDKAVAEQPEYVVFNGHVGAIAGDNALKAKAGETVRMYVGNGGPNLV
                     SSFHVIGEIFDKVYVEDGKLINENVQSTIVPAGGSAIVEFKVDIPGSYTLVDHSIFRA
                     FNKGALGQLKVEGAENPEIMTQKLSDTAYAGSGAASAPAASAPAASAPAASASEKSVY
                     "
     gene            6278..7033
                     /locus_tag="ACFJAG_001793"
     CDS             6278..7033
                     /locus_tag="ACFJAG_001793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formylglycine-generating enzyme family protein"
                     /protein_id="HFC3981028.1"
                     /translation="MKYVRLFFLGTALAGTQAAAAEMVQIEGGSYRPLYLKKDTGLIK
                     VKPFKLDKYPVTNAEFAEFVNSHPQWQKGRIGSKQAEPAYLKHWMKNGSRSYAPKAGE
                     LKQPVTNISWFAANAYCAAQGKRLPTIDEWEFAGLASATQKNGSNEPGYNRTILDWYA
                     DGGRKGLHDVGKDRPNYWGVYDMHGLIWEWTEDFNSSLLSSGNANAQMFCSGASVGAS
                     DSSNYAAFLRYGIRTSLQSKYVLHNLGFRCASR"
     gene            7822..>8337
                     /locus_tag="ACFJAG_001794"
     CDS             7822..>8337
                     /locus_tag="ACFJAG_001794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="opacity family porin"
                     /protein_id="HFC3981029.1"
                     /translation="MQADLAYAAERITHDYPEATAQKKGTTISTVSDYFRNIRTHSVH
                     PRVSVGYDFGSWRIAADYARYRKWNNSKYSVNTRNLRTHESNGNRQDLKTENQENGSF
                     HAASSLGLSAVYDFDTGSRFKPYAGVRVAYGHVKHQVHSVEKETTLTILAPSKGATEP
                     GKIILGPISKPA"
BASE COUNT         2126 a         2346 c         2073 g         1792 t
ORIGIN      
        1 ttcagacggc attgttctcc cgccgtcatt cccgcgcagg cgggaatccg gaacgtaaaa
       61 tctaaagaaa ccgttttatc cgataagttt ccgtgccgac aggcccggat tcccgcctgc
      121 gcgggaatga cgggatttta ggtttctgat tttggttttc tgtttttgag gaaatgacgg
      181 gattttagta accgtaacaa ctgcctgcgc gacggctaag gggcttcagc aaccgtagca
      241 actgcctgtg tgggaatgac ggacaatggg cttcagacgg catctcttgc cttccgctaa
      301 aacagtttgc cgcacaactg ttcaaacgcg tccgatatgt ttcaacacac aggacgacac
      361 ataaagcacc gccctatatg tcgtcctgat tcggaagggg ttacgcccct cccaaacaaa
      421 gtctgatcct gccgccctaa agggcggggt ttcaaccgaa aaggaaacac gatgaagtgg
      481 tacaattaac ggcaatgcgg acagacaaat taaactatca gaaattgccc taccgttttt
      541 taaacacttt caggaataag gaaaaatgac cgcccaaccc tgccccatct gcacggcaca
      601 agatgaagat attttgctgc aaacccccaa gctgcgcgtc atcgccgtcc ataacgacag
      661 cggttcgccg gcattctgcc gcgtcatttg gcacggacac attgccgaaa ttaccgacct
      721 ttcggcagcg gaacgcggcg aattgatgga aatggtgtac aaagtcgaag ccgctatgcg
      781 ccaagtgttc cggccggcaa aaatcaacct cgccagcttg ggcaatgtcg tgccgcacct
      841 gcattggcat attatcgccc gctttgaaaa cgatgcgact ttccctgcgc cgatttgggc
      901 aaaccccgtc cgaaaacacg gtatgaccct gccgcaaaat tggacggaac agcttaaaaa
      961 gctgctttaa acccgccgat gccgtctgaa accgtatgaa agggaaatta tgaccgaacc
     1021 gacctcccgc cgccgttttc tgaaaacctg caccgccgcc ggcgcggggc tgcttcaggc
     1081 ttgcggcaca tccgccacat ccgttccgcc ccttccctct tcccattccg ttgtgaaagc
     1141 ccgaaccgtg cctctccaaa cgccacgccg tcaaagttcg gacggcaacc ttctgcgcgt
     1201 tgtcgcttcg tcaggatttg ccgaagacac caaccgcgtc aacacagcct taacccgcct
     1261 ttacaatgcc ggttttaccg taaccaacca acaggcgggc agccgccgtt tccaacggtt
     1321 tgccggcacg gacgcgcaac gcgcggcaga tttccaagag gtcgcctccg gccgcgtcgc
     1381 cacgcctaaa gtgctgatgg gcttgcgcgg cggttacggt gcggcgcgga ttctgccgca
     1441 tatcgatttt gcctcgctcg gcgcaaggat gcgcgaacac ggcacgctgt ttttcggatt
     1501 cagcgacgta tgcgccgtcc aactggcatt gttggcaaaa ggcaatatga tgagttttgc
     1561 cggcccgatg gcttatagcg attttggcaa acctgccccc ggtgcgttta cgatggatgc
     1621 ctttatcaag gggacaaccc aaaaccgcct gaccgttgat gttccttata tccaacgcgc
     1681 cgatgtcgaa accgaaggca cgttgtgggg cggcaactta agcgtcctcg cctcgctcgc
     1741 cggtacgcct tatatgcccg acatcgacgg cggcattttg ttcctcgaag atgtcggcga
     1801 acagccctac cgcatcgaac gtatgctcaa tacgctgtat ctttcgggta ttttgggcaa
     1861 acagcgcgcc atcgtgttcg gcgatttccg tatggaaaaa attcgagatc tctatgattc
     1921 gtcttatgat ttttccgccg ttgccaagca tatttcgcgc acggcgaaaa tccccgtgct
     1981 gacgggcttc ccgttcggac acattgccga caaaatcact ttccctctgg gcgcgcacac
     2041 ccgaatccgt atgaacggaa acggcggcta ttcggtcgcg tttgaaggct accccacact
     2101 cgatgcgtcc gccctgactt tggataccct gctcccaccg ccggatttgc ctatcttccc
     2161 cgaaagcggt gttgccgata tttcggaata aacccgcaaa cggacaaatg ccgtctgaag
     2221 ccttcagacg gcattttcct gtaaaaaaaa ccgcacctga tggcaggtgc ggtttccatt
     2281 ttcaggctaa aacttatttg tcgcggccga atacgatttt agtggcttgg atggcaacgc
     2341 agattgcacc gccgataaag attaagtcgg gggcagtgcg tacccagcgc agggtgtcga
     2401 ggatttccat ttgcaggaat tcttcgctgc gggcatacca caaaccgtgc gtgatagagg
     2461 cgtatgcctg aatcacgccg acaggcagca ggctgatggc aatcataccg accaagccgc
     2521 cgttgagcag ccagaagccc caagtcatca gtttgtcgtc aaaccgcgcg ttcggtttca
     2581 agtagcgcgc aaccaacaat acgaagccca atgccaagaa accgtacaca ccgaacaagg
     2641 cggcgtgcgc gtgaacggcg gaagtgttca aaccttggat atagaacagg gaaatcggcg
     2701 gattgatcag aaagccgaat acgccggcac cgatcatatt ccaaaaagcg actgccacga
     2761 agcacattag cggccaacgc aggcgtttcg cccagtcgga caggtgttgg taagaccagt
     2821 gctcgtatgc ctcgcggccc agcaacacca gcggcacgac ttccaaagcg gagaagcagg
     2881 cgccgattgc catagaggcg gaggtagagc cggagaagta caggtggtgc agcgtgcccg
     2941 gaacgccgcc caacataaag atggcggcag cggccaaagt ggaggcagtg gcggtactgc
     3001 ggcggacaaa gcccatattg tagaagacaa aggcaaaggc ggcagtggca aatacttcaa
     3061 agaagccttc cacccacagg tggaccaccc accaacgcca gtattccatt acggcaatcg
     3121 gggatttttc gccatagaac aggcccggtg cgtagaacac gcccacgccg accatagaag
     3181 cgacaaagat tgccagcaag tttttgtcca cgcctttttc tttgaaggcg gaaaccgtgc
     3241 agcgcaacat caggaacagc cacaacagca gtccgaccat caaaaggagt tgccagaaac
     3301 gtcccaaatc gaggtattcg taaccttggt gtccgaacca gaagttaaat tcggggggaa
     3361 ggatgtgcgt caacgcgaag aagttgcccg cgtaagaacc gccgaccacg atgaagaggg
     3421 cgatatagag gaagttcacg cctgcacgtt ggaacttggg atctttgccg ccgttgacaa
     3481 tcggcgcgag gaacaaacct gccgtcaaaa agccggttgc aatccagaag atggcggatt
     3541 ggatgtgcca agtacgggtc agggcgtagg ggaaccagtc ggacatttca aagcccaacg
     3601 cctcgtcaat gccgtagaaa ccctgacctt cgacggtgta gtgcgcggtc aggccgccca
     3661 gcaatacttg taccacaaac agggcgaccg tcaggaagac gtatttgccc aatgcttttt
     3721 gcgaaggggt cagttggatt ttggaaatcg ggtcttcaga cggcacttcc acttcctcgt
     3781 gtttggtcag gaaggaataa ccccacatca acaaaccgat gcccatcaag agcagtacga
     3841 cactggtaaa cgaccacatg tagttttcag tagtcggtac attgttgatc aaaggctcgt
     3901 gcggccagtt gttggtgtag gtaaagacct cgccgggacg gttggtcgaa gcagaccaag
     3961 aagtccagaa gaagaagtcg aacagttttt cacgcgcttc ttggcttggc aatgtgttgt
     4021 ttttcattgc aaagtgttcg cgggtggttt gcaacttggg atcatcgccg taaacgccgt
     4081 gatagtaagg caggatgctt tcgatggctt tcacgcgcgt atcgctgatg acgacgctgc
     4141 cgtcttcttt aatacggctt tgattgcggt attcatcggc caagcgggtt ttcagaacgg
     4201 cttgttcttc aggggaaact tcatcgaatt ttttgccgta agcctgttgc gcggtcaaat
     4261 ccaaccaggc ggacaactca cgatgcagcc agtcggccgt ccaatccgga gcctgatatg
     4321 cgccgtgtcc cagaatcgaa ccgacttcca tgccgccggt agtctgccac gcagactgac
     4381 ctgccaaaat atcgtctttc gtcatcagca ctttgccgga tgcggaaacg acctgttcgg
     4441 ggtaaggcgg ggctttctta taaacctcgc tgcccatata gccaagaatg gtaaagcata
     4501 ccgccagaac ggcaaacagc aagtaccaca gcttcttgta ctgtcccatt ttgagagctc
     4561 cttttaataa atcagttgtt taaaattcac aaaatatgaa tgttaaagat tgtagcatgg
     4621 tttaccgcgc aaataaacat ttgttcaaac aaactcacat atagaacaaa tacatatatg
     4681 ataataacta tcattattct ttactcggaa attgccctgc ctttgcctgc tctgccggag
     4741 cccctagcaa atcagcctat tcattgtaat ttttagtagt tataaagtat tagaagcgtc
     4801 attttaagtt catattttat gaattatttg acttaaatta aaatgcccgc aatgggacaa
     4861 ccgcataatc acaccaagtt cttaactaat ccccctactt ttcttacaaa aggaaaacat
     4921 tatgaaacgc caagcattag ccgcaatgat tgcttcctta ttcgcattgg ccgcctgcgg
     4981 tggcgaacaa gctgctcaag cccctgccga aacccctgcc gcttccgcag aagccgcaag
     5041 ttccgccgca caagctaccg ccgaaacgcc tgcaggcgaa ctgcccgtca tcgatgcggt
     5101 gaccacccac gctcccgaag tacctcccgc aatcgaccgc gactatcctg ccaaagtacg
     5161 cgtaaaaatg gaaaccgtcg aaaaaaccat gaaaatggac gacggggtgg aataccgcta
     5221 ctggacattt gacggcgacg ttccgggccg tatgatccgc gtacgcgaag gcgatacggt
     5281 tgaagtcgaa ttctccaaca atccttcttc taccgttccg cacaacgtcg acttccacgc
     5341 cgcaaccggt cagggcggcg gtgcagccgc gacctttacc gccccgggcc gcacttccac
     5401 attcagcttc aaagccctgc aaccgggcct gtacatctac cactgcgccg tcgcgccggt
     5461 cggtatgcac atcgccaacg gtatgtacgg tctgattttg gtcgagccta aagaaggcct
     5521 gccgaaagtg gataaagagt tctacatcgt ccaaggcgac ttctacacca aaggcaaaaa
     5581 aggcgcgcaa ggcctgcaac cgttcgatat ggacaaagcc gttgccgaac agcctgaata
     5641 cgtcgtattc aacggccacg taggcgctat cgccggcgat aacgccctga aagccaaagc
     5701 aggcgaaacc gtgcgtatgt acgtcggtaa cggcggcccg aacttggtgt cttccttcca
     5761 cgtcatcggc gaaatcttcg acaaagttta tgttgaagac ggcaaactga ttaacgaaaa
     5821 cgtacaaagc accatcgtgc ctgccggcgg ttctgccatc gtcgaattca aagtcgacat
     5881 cccgggcagc tacactttgg tcgaccactc catcttccgc gcattcaaca aaggcgcgtt
     5941 ggggcaattg aaagtagagg gtgcggaaaa ccctgaaatc atgactcaaa aattgagtga
     6001 taccgcttac gccggcagcg gcgcggcttc tgcccctgct gcttccgcac cggctgcttc
     6061 tgccccggca gcctctgcat ccgaaaaaag cgtttattaa atcggatacc cgtcattagc
     6121 gggacaaacc actgccgccg tacttcatta cgcacggcag tggtttttta acaaccaatc
     6181 tttcctttcg gaagattgat ttttcagacg gcattcgcgg ctttttgttt aaaatgccgt
     6241 ctgaaaaatc aatgctaacc gcctgtcagg aggctttatg aagtacgtcc ggttattttt
     6301 cctcggcacg gcactcgccg gtactcaagc ggcggctgcc gaaatggttc aaatcgaagg
     6361 cggcagctac cgcccgcttt atctgaaaaa agataccggc ctgattaaag tcaagccgtt
     6421 caaactggat aaatatcccg ttaccaatgc cgagtttgcc gaatttgtca acagccaccc
     6481 ccaatggcaa aaaggcagga tcggttccaa acaggcagaa cccgcttacc tgaagcattg
     6541 gatgaaaaac ggcagccgca gctatgcgcc gaaggcgggc gaattgaaac agccggttac
     6601 caatatttcc tggtttgccg ccaacgccta ttgcgccgca caaggcaaac gcctgccgac
     6661 catcgacgaa tgggaatttg ccggacttgc ttccgccacg cagaaaaacg gctcaaacga
     6721 acccggctac aaccgcacta ttctcgattg gtatgccgac ggcggacgga aaggcctgca
     6781 cgatgtcggc aaagaccgcc cgaactactg gggtgtttac gatatgcacg ggctgatttg
     6841 ggaatggacg gaagatttca acagcagcct gctttcttcc ggcaatgcca acgcgcaaat
     6901 gttttgcagc ggcgcatctg tcggggcgag cgactcgtcc aactatgccg ccttcctccg
     6961 ctacggcatc cgcaccagcc tgcaatccaa atatgtcctg cacaacttgg gcttccgctg
     7021 cgcaagccga taaccccttc aattatagtg gattaacaaa aaccagtacg gcgttgcctc
     7081 gccttgccgt actggttttt gttaatccgc tatattccgc catctctaag atttacagcg
     7141 atacacgggt aatttaagga atgcccgaac cgtcattccc gcaacttttc gtcattcccg
     7201 cgaaagcggg aatccagaat cccggacttt cagataatct ttgaatattg ctgttgttcc
     7261 aaggtccgga ttcccgcttg cgcgggaatg acgattcata agtttcccga aattccaaca
     7321 taaccgaaac ctgacagtaa ccgtagcaac cgaaccgtca ttcccacaaa agtgggaatc
     7381 caggacgtaa aatctcaaga aacctttttt cccgataagt ttccgcaccg accggcctag
     7441 attcccgccc gcgcgggaat gacggctgca gatgcccgac ggtctttata gcggattaac
     7501 aaaaatcagg acaaggcggc gggccgcagg cagtacaaat agtacggaac cgatccgccc
     7561 ggtgcttcag caccttaggg aaccgttccc tttgagccgg ggcggggcaa cgccgtaccg
     7621 gtttttgtta atccgccata ttgtgttgaa acaccgcccg gaacccgata taatccgcct
     7681 ttcaacatca gtgaaaatct ttttttaacc ggtcaaaccg aataaggagc cgaaaatgaa
     7741 tccagcccgc aaaaaacctt ctctcttctc ttctcttccg cagcgcaggc ggcaagtgaa
     7801 ggcaatggcc gcggcccgta tgtgcaggcg gatttagcct acgccgccga acgcattacc
     7861 cacgattatc cggaagcaac cgctcaaaaa aaaggcacaa caataagcac ggtaagcgat
     7921 tatttcagaa acatccgtac gcattccgtc caccccaggg tgtcggtcgg ctacgacttc
     7981 ggcagctgga ggatagcggc agattatgcc cgttacagaa aatggaacaa cagtaaatat
     8041 tccgtcaaca caagaaattt gcggacacat gaaagcaatg gcaacaggca agatctgaag
     8101 acggaaaatc aggaaaacgg cagcttccat gccgcttctt ctctcggctt gtccgccgtt
     8161 tacgatttcg ataccggttc ccgcttcaaa ccctatgcag gcgtgcgcgt cgcctacgga
     8221 cacgttaaac atcaggttca ttcagtggaa aaagaaacta cgcttacaat ccttgcacca
     8281 tcgaaaggcg ctacagagcc aggcaagatc atactaggtc cgatcagcaa acctgcc
//
LOCUS       DAXFZM010000088         8213 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.088, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000088 DAXFZM010000000
VERSION     DAXFZM010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8213)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8213)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8213
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.088"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            1..185
                     /locus_tag="ACFJAG_001795"
                     /pseudo
     CDS             1..185
                     /locus_tag="ACFJAG_001795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003776296.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1275 domain-containing protein"
     gene            333..558
                     /locus_tag="ACFJAG_001796"
                     /pseudo
     CDS             333..558
                     /locus_tag="ACFJAG_001796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749744.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing N-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1275 domain-containing protein"
     gene            668..1345
                     /locus_tag="ACFJAG_001797"
     CDS             668..1345
                     /locus_tag="ACFJAG_001797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HFC3981030.1"
                     /translation="MTFFKPFTVVLTASALALSGCVADPVTGQQSPNKSAMYGLGGAA
                     VCGIVGALTHSGKGARNSALACGAIGAGVGGYMDYQEQRLRQNLAGTQIEIQRQGNQI
                     RLVMPESVTFATGSAALGGSAQYALNTAAQTLVQYPDTTLTINGHTDNTGSDAVNNPL
                     SQHRAQAVAYYLQTRGVAASRLTVYGYGSHMPVASNATVEGRAQNRRVEILINPDQRA
                     VNAARHM"
     gene            complement(1619..2389)
                     /gene="xth"
                     /locus_tag="ACFJAG_001798"
     CDS             complement(1619..2389)
                     /gene="xth"
                     /locus_tag="ACFJAG_001798"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008311 - double-stranded DNA 3'-5' DNA
                     exonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HFC3981031.1"
                     /translation="MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPA
                     AALQMMGWHCVWSGQKTYNGVAIVSRSVPQDVHFGLPSLPDDPQRRVIAATVGGVRVI
                     NVYCVNGEALDSPKFKYKEQWFAALTEFVRDEMTRHGKLVLLGDFNIAPADADCYDPE
                     KWYEKIHCSSVERQWFQNLLDLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDH
                     ILVTSEMAAVLKDVRIDLETRALERPSDHAPVAAEFDL"
     gene            complement(2449..2730)
                     /locus_tag="ACFJAG_001799"
     CDS             complement(2449..2730)
                     /locus_tag="ACFJAG_001799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HFC3981032.1"
                     /translation="MNTIPLHTILKLMAHPERMAILIQLLDSERNIVELAKSLSLSAT
                     AVSCHLNRLRAGGLVDFTRYHRIIEYRLVSEDAATILRTIRDLENKRAA"
     gene            2787..3053
                     /locus_tag="ACFJAG_001800"
     CDS             2787..3053
                     /locus_tag="ACFJAG_001800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017147006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981033.1"
                     /translation="MILIIFINCIINQLFISHCTGLYVPFPTIFANKRKDRLSDGIKL
                     PPPSFPPVLPPAGIIRIVQKMPYNRRTPCPADASAPSGKQNIVD"
     gene            complement(3183..3326)
                     /locus_tag="ACFJAG_001801"
     CDS             complement(3183..3326)
                     /locus_tag="ACFJAG_001801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981034.1"
                     /translation="MSGKEPLNRNPVIASGRECRLKYSSDGIFREGRDALEKTAFQAG
                     IVD"
     gene            complement(3354..4235)
                     /gene="nadC"
                     /locus_tag="ACFJAG_001802"
     CDS             complement(3354..4235)
                     /gene="nadC"
                     /locus_tag="ACFJAG_001802"
                     /EC_number="2.4.2.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004514 - nicotinate-nucleotide
                     diphosphorylase (carboxylating) activity [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HFC3981035.1"
                     /translation="MPSENPLFALPDTLLRPMVEQALSEDLGRRGDITSAAVIAPDKT
                     AKLFLVSREDGVIAGMDLARLAFQTMDPCVRFQAEIQDGQAVRAGQTLAAVEGNARAL
                     LAAERTALNYLTHLSGIATATARAVAEVAEYGTDIVCSRKTIPLLRVLQKYAVRAGGG
                     ANHRMGLDDAVLIKDNHLAYCGSIAQAVRQAKQAVGPLTCVEIEVDTLAQLDEAIAAG
                     AERILLDNMDDETLKEAANRCHTQTAHPHTVYCEASGGIGFDRLKRVAQTGVDGIALG
                     YLTHSSRSLDIGLDFVA"
     gene            complement(4311..5249)
                     /locus_tag="ACFJAG_001803"
     CDS             complement(4311..5249)
                     /locus_tag="ACFJAG_001803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981036.1"
                     /translation="MDAYPEAEAPLQSIVELVPVLIAVTDGGLRVLTVAQGTLLPNGP
                     LSPLRNSLQAGVKLWVAKQTSQPMGYVEQLYTFVDTHRRNEHGMPVLYVSYLGLVREA
                     ADSILHPDAKWQDCYGYFPWEDLRTDGGQRDAVVSRLRIWANSADTEEVRQKRLKHIH
                     LCWGVEPENWSEEYVLQRYEMLYESGLIAEAAEPQANFDFALTGQTMRHDHRRVLATA
                     LSRLRAKIKYRPVIFELMPPEFTLLQLQNSVEAISGRLLHKQNFRRQIQQQNLIEPSD
                     TGVSGSKGRPAQLCRFRDDVLPDRLISDIGLPLGSR"
     gene            5451..6563
                     /gene="nadA"
                     /locus_tag="ACFJAG_001804"
     CDS             5451..6563
                     /gene="nadA"
                     /locus_tag="ACFJAG_001804"
                     /EC_number="2.5.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008987 - quinolinate synthetase A
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="quinolinate synthase NadA"
                     /protein_id="HFC3981037.1"
                     /translation="MQTAARRSFDYDMPLIQTPTSACQIRQAWAKVADTPDHETAGRL
                     KDEIKVLLKRKNAVLVAHYYVDPLIQDLALETGGCVGDSLEMARFGAEHEAGTLVVAG
                     VRFMGESAKILCPEKTVLMPDLEAECSLDLGCPEEAFSAFCDQHPDRTVAVYANTSAA
                     VKARADWVVTSSVALEIVSYLKSRGEKLIWGPDRHLGDYIRRETGADMLLWQGSCIVH
                     NEFKGQELAALKAEHPDAVVLVHPESPQSVIELGDVVGSTSKLLKAAVSRPEKKFIVA
                     TDLGILHEMQKQAPDKEFIAAPTAGNGGSCKSCAFCPWMAMNSLGGIKHALTGGRNEI
                     LLDRKLGEAAKLPLQRMLDFAAGLKRGDVFNGMGPA"
     gene            6615..8123
                     /gene="nadB"
                     /locus_tag="ACFJAG_001805"
     CDS             6615..8123
                     /gene="nadB"
                     /locus_tag="ACFJAG_001805"
                     /EC_number="1.4.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008734 - L-aspartate oxidase activity
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-aspartate oxidase"
                     /protein_id="HFC3981038.1"
                     /translation="MQTDCDVLIAGNGLAALTLALSLPESFRIVILCKNRLDDTASRH
                     AQGGIAAAWSGEDDIGKHVADTLEAGAGLCDEAAVRTILSQGKPAIEWLLAQGVAFDR
                     NHNDLHLTREGGHTCRRIAHVADYTGEAVMQSLIIQIRRRPNIRVYERQMALDVQTES
                     GAACGLTVLDCRTQETYRIRARHTVLAGGGLGQIYAATTTPPECTGDAIAMAIRAGCA
                     IENLEFIQFHPTGLARPSENGRTFLISEAVRGEGGILTNQSGERFMPHYDRRAELAPR
                     DIVARAIAAETAKQTQDFVSLDISRQPAAFVRRHFPSIHRHCLSQCGLDITRQAIPVR
                     PVQHYTCGGIQTDPSGRTSLPQLYALGETACTGLHGANRLASNSLLECVVTARLAAQG
                     IADGQAFQIEPFQRPSESPSAETDIFSNDLQNTFSRPVLQTFNQRHLGILRNDTDLHR
                     AIDQLRLWKQNQAEPHTASEYENRNLLECSLAVAQAAYRRRQNIGAHFNSDC"
BASE COUNT         1778 a         2416 c         2317 g         1702 t
ORIGIN      
        1 gcaatgggac atcggcggca gcggggcggt tttcccttcg ctcgcactgt ttctgctctg
       61 tttcatcata ggtatgcaca acacggggat gacgcttctg ccgggcggtg caatctgttc
      121 gacgcacatg gcccggcacg gcagccgact tgggcatcga aatcccgcgc gtgccgtact
      181 atagtggatt aacaaaaacc agtacggcgt tggcccgcct tagctcaaag agaacgattc
      241 tctaaggtgc tgaagcacca agtgaatcgg ttccgtacta tctgtactgt ctgcggcttc
      301 gccgccttgt cctgattttt gttaatccac tatattccta aacccaccat ccgcgcctgc
      361 cgcacgtaca cgtcgacaaa ccgaaaatat ggctgctcgg cggcatcgtc ggcgcgtggg
      421 gctgccataa aatcggacac catttctccc tgcccgtttc ggcagtattg ccgataccgg
      481 gtgcaggctc ggtcggctac gatgtgaagg tacgtttttt tgcggatgtg gctgcggttt
      541 cggcgcaaat cacgataaac ccgcgttgtt tcgggaaaaa tcgggtaatt tcaggttaat
      601 tgcacttttt cagacggcat gattgcttat agttgtacgg tttgacatat gcacggaagg
      661 aaacgccatg actttcttca aaccctttac cgtcgtgctg accgcatccg cactcgcgct
      721 ttccggctgc gttgccgacc ccgtaaccgg acagcagtcc ccaaacaaat ccgccatgta
      781 cggtttgggt ggcgcggcag tgtgcggcat cgtcggcgca ctgacccaca gcggcaaagg
      841 cgcacgcaat tccgcgcttg cctgcggcgc aatcggcgca ggcgtgggcg gctatatgga
      901 ctaccaagag cagcgtttgc gccaaaacct tgccggcacg caaatcgaaa tccaacgcca
      961 aggcaaccaa atcaggctgg tgatgcccga aagcgttacc ttcgccaccg gcagcgcggc
     1021 gttgggcggc agtgcgcaat acgccctgaa cactgccgca cagacgctgg tgcagtatcc
     1081 cgacacgacg ctgaccatca acgggcacac cgacaacaca ggttccgatg cagtcaacaa
     1141 tccgctttcg caacaccgcg cccaagcggt tgcctactat ctgcagacgc gcggcgtggc
     1201 ggcttcgcgc ctgacggttt acggctacgg ttcgcatatg ccggtcgcgt ccaacgctac
     1261 ggttgaaggc cgcgcgcaaa accgccgcgt cgaaatcctc atcaaccccg accaacgcgc
     1321 cgtcaacgcc gcacggcaca tgtaacgcgc cctgcaacgc caatgccgtc tgaatgtttt
     1381 tcagacggca tttccgtatt cgcaagcaca gccgtacccc gactgtaatg ctatggataa
     1441 cgtctcgccg tttgccggga aaccgcagat tgcagccggt ggcgtgcaag tgggcccaac
     1501 cttgcagacg ttaccgccat accgcgatac ccctgtaacc tcatcgttta aacagatatt
     1561 caatcaaaat gccgtctgaa accctgcgaa gtttcagacg gcatttgcct ttcccgaatt
     1621 acaaatcaaa ttctgccgcc acgggcgcgt ggtcgctcgg acgctccagc gcgcgcgtct
     1681 ccaaatcgat gcggacatcc ttcaaaacgg ccgccatttc ggatgtaacc aatatatggt
     1741 cgatacgcag gcccagtttg cgttggaaca tcgcgccgcg atagtcgaac caggtataga
     1801 acgcgccttc ggggtggact tggcgcaggc tgtcggtcaa tcccaaatcc agcagatttt
     1861 gaaaccactg ccgttcgacg gacgaacagt ggattttttc ataccatttt tcagggtcgt
     1921 aacagtccgc atcggcaggc gcaatattga aatcgcccag cagtaccagt ttgccgtggc
     1981 gggtcatttc gtcgcggaca aactccgtca gtgcggcaaa ccactgttcc ttatatttga
     2041 atttggggct gtccaaagcc tcgccgttga cgcaatagac attgatgacg cgcacgccgc
     2101 ctacggtcgc cgcaatcacg cggcgttgcg ggtcatccgg cagggaaggc aaaccgaaat
     2161 gcacgtcctg cggcacgctg cggctgacga ttgccacacc gttgtaggtt ttctgcccgc
     2221 tccaaacaca gtgccagccc atcatctgca aggcggcggc cggaaatttg tcctgatcga
     2281 gtttgagttc ctgcaaaacc aaaatatcgg gcggattgtc ggcaagcagg ttttgcacct
     2341 gcggcagccg cacattgagc gaattgacgt tccaagtggt gattttcata acatttccga
     2401 aaaatgccgt ctgaaacgtt cagacggcaa aagaaaagga ttctaacact atgccgcgcg
     2461 tttgttttcc aaatcgcgga ttgtccgcag aatcgttgcc gcgtcttcgg aaaccaggcg
     2521 gtattcgata atgcggtggt aacgcgtaaa gtccaccaga ccgcccgccc tcaggcggtt
     2581 caaatgacag gaaaccgcgg tagccgacag ggataaggat tttgccagtt cgacgatatt
     2641 gcgttcgctg tccaacagtt ggatcagtat cgccatacgt tcgggatgcg ccataagttt
     2701 gagtatggtg tggagcggta ttgtgttcat cggtattcct aaaacctttt ccgcccgcca
     2761 agcggattga cgggcggcag atatggatga ttttgattat ctttataaat tgtattataa
     2821 atcaattgtt tatttctcat tgtacaggat tgtatgttcc ttttcccact atttttgcaa
     2881 acaagcgtaa agacaggctt tcagacggca taaaactgcc gcccccgtcc tttccccctg
     2941 tcctgccgcc ggccggaatc atccgcattg ttcaaaagat gccttacaac cgccgcacgc
     3001 cttgccctgc cgatgcctcc gcgccttcgg gcaaacaaaa tatagtggat taacaaaaat
     3061 caggacaagg cgacgaagcc gcagacagta taaatagtac ggaaccggtt cacttgatgc
     3121 ttcagcacct tagagaatcg ttctctttga gccggggcgg ggcaacgccg taccggtttt
     3181 tgttaatcca ctatacctgc ctgaaatgct gttttttcta aagcatcacg accttcacga
     3241 aaaatgccgt ctgaagaata tttcagacgg cattccctcc ctgaggcaat aaccggatta
     3301 cggttaagcg gttccttacc tgacatatca gacagccgcc cgcaccctga aactcacgcc
     3361 acgaaatcca aacctatgtc caacgatcgg ctgctgtggg tcagatagcc gagggcgatg
     3421 ccgtccacgc cggtttgcgc cacgcgcttc aggcggtcga agccgatgcc gcccgatgct
     3481 tcgcaataga cggtgtgggg gtgggcggtt tgtgtgtggc agcggtttgc cgcttctttc
     3541 agggtttcgt cgtccatgtt gtccagcaaa atccgttccg cgcccgctgc gatggcttcg
     3601 tccagttgtg ccaatgtgtc cacttcgatt tccacgcagg tcaatggtcc gaccgcctgt
     3661 tttgcctgcc gaacggcttg ggcgatgctg ccgcaatagg cgaggtggtt gtctttgatg
     3721 agcacggcgt cgtccaaacc catgcggtgg ttcgcgccgc cgcccgccct gacggcgtat
     3781 ttttgcagga cgcgcagcag ggggatggtt ttgcggctgc acacgatgtc tgtaccgtat
     3841 tcggcgacct cggcaacggc acgagcggtg gcggtggcga tgccgcttaa gtgcgtgagg
     3901 tagttgagcg cggtgcgttc ggcggcgagc agcgcgcggg cgttgccttc gacggcagcc
     3961 agtgtctgac ctgcgcggac ggcttgcccg tcttggattt cggcttggaa gcggacgcac
     4021 ggatccatcg tctgaaaggc gaggcgcgcc aagtccatac cggcgataac accgtcttcg
     4081 cggctgacga ggaaaagttt ggcggttttg tcgggcgcga tgacggcggc ggacgtaatg
     4141 tcgccgcgcc tgcccaagtc ttcgctcaag gcttgttcca ccatagggcg caacaaggtg
     4201 tcgggcaggg caaagagggg gttttcagac ggcatggggt ttcctttgtt aaaaaagatt
     4261 gatgttgcac cgatggggca aaacttcatt tgatgccgtc tgaaaacggg ctaacggctg
     4321 cccagcggca gtccgatgtc cgaaatcagc ctgtcgggca ggacgtcgtc gcggaagcgg
     4381 caaagctgcg cgggacggcc tttgctgccc gatacgcctg tatccgacgg ctcgatgagg
     4441 ttttgctgct gaatctggcg gcggaagttt tgcttgtgca gcaatctgcc gctgatggct
     4501 tcgacgctgt tttgcagttg cagcagcgtg aattcgggcg gcatcagttc gaaaatcacg
     4561 gggcggtatt tgattttggc gcgcaggcgg gacagggcgg tcgccaacac gcggcggtgg
     4621 tcgtggcgca tggtctgccc cgtgagcgcg aagtcgaagt ttgcctgcgg ctcggcggcc
     4681 tccgctatca gaccgctttc atacaacatt tcatagcgtt gcaaaacgta ttcttccgac
     4741 cagttttccg gttcgacccc ccaacacaaa tgaatatgct tgagccgctt ttggcggact
     4801 tcctccgtgt ccgccgagtt tgcccaaatg cgcaggcggc tgacgacggc gtcgcgctgc
     4861 ccgccgtcgg tgcgcaagtc ttcccatggg aaatagccgt agcagtcctg ccatttcgcg
     4921 tcgggatgca ggatgctatc ggctgcctcg cgcaccagcc ccaaatagct gacgtacagc
     4981 acgggcatgc cgtgttcgtt gcggcggtgg gtatcgacaa aggtgtaaag ctgttccaca
     5041 tagcccatag gctgcgaagt ctgcttggcg acccacagct ttacgcccgc ctgcagggaa
     5101 ttgcgcaggg gggaaagcgg gccgttgggc aggagcgtgc cttgggcgac ggtcaacacc
     5161 cgcaggccgc cgtcggtaac ggcaatcaat acgggaacca gctcgacgat gctttgcagc
     5221 ggagcttcgg cttcggggta ggcgtccatg ctcggctttc tgcgggtggg aaaggcttta
     5281 ttgtaaacca aagcggtttg tcggaacgaa gcgggtcggt tttgcggtat cgcaaacctg
     5341 ttttcagacg accttgcata ttatactcaa gttgagcata atgtaaaaac agtttgaaaa
     5401 acagacggca aaccttcatg ccgtctgaaa accagctaca aggaaacatc atgcaaaccg
     5461 ccgcccgccg ctcgttcgat tacgatatgc ccctcatcca aacgccgact tccgcctgcc
     5521 aaatccgtca ggcgtgggcg aaggttgccg acacgcccga ccacgagacg gcaggtcgtc
     5581 tgaaagacga aatcaaggtc ttgctgaagc ggaaaaacgc ggtcttggtg gcgcattatt
     5641 acgtcgatcc gctgattcag gatttggctt tggagacggg cggatgcgtg ggcgattcgc
     5701 tggaaatggc gcgcttcggc gcggaacacg aagccggtac gctggtggtg gcgggcgtgc
     5761 gtttcatggg cgagagcgcg aaaatcctct gccctgaaaa aacggtgctg atgcctgatt
     5821 tggaagcgga atgttctttg gatttgggtt gtcccgaaga agcgttttca gcgttttgcg
     5881 accaacaccc cgaccgcacg gtggcggtgt acgccaatac ttccgcagcc gtgaaagcgc
     5941 gtgccgactg ggtggtaacg tcttcggtgg cgttggaaat cgtgtcgtat ctgaaatcgc
     6001 gcggcgagaa actgatttgg gggcccgacc gccatctcgg cgactacatc cgccgcgaaa
     6061 cgggcgcgga tatgctgttg tggcagggtt cgtgcatcgt ccataacgaa ttcaaagggc
     6121 aggaactggc ggcgttgaag gcagagcatc ccgatgctgt ggtgctggtt catcccgaat
     6181 cgccgcaaag cgtcatcgaa ctgggcgacg tggtcggctc gaccagcaaa ctactcaaag
     6241 ccgccgtatc gcgccctgaa aaaaaattca tcgtggcaac cgatttgggc atcctgcacg
     6301 aaatgcaaaa gcaggcgccc gacaaagaat ttatcgccgc gccgacggcg ggcaacggcg
     6361 gaagctgtaa aagctgcgcg ttctgcccgt ggatggcgat gaattcgctg ggcggcatca
     6421 aacacgccct gacaggcgga cgcaacgaaa tcctgttgga cagaaagctg ggcgaagccg
     6481 ccaaactgcc tttgcagcgt atgctcgact tcgcggcagg actcaaacgc ggggatgtgt
     6541 tcaacggcat ggggcccgcc tgatttgccg tccatatcgc cgtttcagac gacctctcaa
     6601 acaaggacaa caccatgcaa accgattgcg acgtattgat tgccggaaac gggctggcgg
     6661 cactgacgct cgccctgtcg ctgcctgaat cgttccgcat cgtcattttg tgcaaaaacc
     6721 ggctggacga caccgccagc cgtcatgcgc aaggcgggat tgcggcggcg tggtcgggag
     6781 aggacgacat cggaaaacac gtcgccgata ctttggaagc gggcgcaggt ttgtgcgacg
     6841 aagccgccgt ccgcaccatc ctgtcgcagg gcaaaccggc aatcgaatgg ctgctggcgc
     6901 agggcgtggc gttcgaccgg aatcataacg acctgcacct gacgcgcgaa ggcgggcata
     6961 cctgccgccg aatcgcccac gtcgccgact acacgggcga agccgtcatg cagagcctga
     7021 ttatccaaat acgccgccga ccgaacatcc gcgtttacga gcggcagatg gcgttggacg
     7081 ttcaaaccga atcaggcgca gcgtgcggac tgaccgtcct cgactgccga acgcaagaaa
     7141 cctaccgcat ccgtgcccgc cataccgtac tcgcaggcgg cggcctcggg caaatttacg
     7201 ccgccaccac cacgccgccc gaatgcacgg gcgacgccat cgccatggcg atacgcgcgg
     7261 gttgcgcaat cgaaaacctc gaatttatcc aattccaccc cacaggcttg gcaaggccgt
     7321 ctgaaaacgg ccgcaccttc ctgatttccg aagccgtgcg cggcgaaggc ggcatcctga
     7381 ccaatcaatc gggcgaacgg tttatgccgc attacgaccg ccgcgccgaa ctcgcgccgc
     7441 gcgacatcgt tgcccgcgcc atcgccgccg aaaccgccaa acaaacgcaa gacttcgtct
     7501 cgctcgacat cagccgccaa cccgcagcgt tcgtccgtcg gcatttcccg tccatccatc
     7561 ggcactgcct gtcccaatgc ggcttggaca tcacgcgcca agccatcccc gtccgccccg
     7621 tgcaacacta cacctgcggc ggcatccaaa ccgaccccag cggcagaacc tccctgccgc
     7681 agctctacgc cttaggcgaa accgcctgta ccggactgca cggagccaac cgcctcgcca
     7741 gcaactccct gctcgaatgc gtcgttaccg ccaggcttgc cgcccaaggc atcgcggacg
     7801 gacaagcgtt ccaaatcgaa ccattccaaa ggccgtctga aagcccctcc gccgaaacag
     7861 acatcttttc aaacgacctc caaaacacat tcagccgccc tgtcctgcaa acgttcaacc
     7921 aacgccatct cggcatcctc cgcaacgata ccgacctgca ccgcgccatc gaccaactgc
     7981 ggctttggaa gcaaaaccaa gccgaaccgc acaccgcgtc cgaatacgaa aaccgcaacc
     8041 tactcgaatg cagcctcgcc gtcgcccaag ccgcatacag gcggagacag aacatcggtg
     8101 cgcattttaa tagtgattgt taaggttggc tggttagaaa aaaatcgttc aaataaattt
     8161 gaatagcatg gttaagagat tggcattcag tttttatggt tgcgtaagtt ggg
//
LOCUS       DAXFZM010000089         7953 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.089, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000089 DAXFZM010000000
VERSION     DAXFZM010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7953)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7953)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7953
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.089"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            84..356
                     /locus_tag="ACFJAG_001806"
     CDS             84..356
                     /locus_tag="ACFJAG_001806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981039.1"
                     /translation="MKKTSKYLIYTAAFTSFCFAFQENRSEAKQPDITLSASLCEQFN
                     MLNAKDMDTEQVSLSKECDIIESSHDWEKEYGNLNEQEMLAGVVYE"
     gene            564..2492
                     /gene="dnaK"
                     /locus_tag="ACFJAG_001807"
     CDS             564..2492
                     /gene="dnaK"
                     /locus_tag="ACFJAG_001807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HFC3981040.1"
                     /translation="MAKVIGIDLGTTNSCLAISENGQTKVIENAEGARTTPSIIAYLD
                     GGEILVGAPAKRQAVTNAKNTIYAAKRLIGHKFEDKEVQRDIESMPFEIIKADNGDAW
                     VKAQGKELSPPQISAEVLRKMKEAAEAYLGEKVTEAVITVPAYFNDSQRQATKDAGRI
                     AGLDVKRIINEPTAAALAFGMDKGDNKDRKVAVYDLGGGTFDISIIEIANLDGDKQFE
                     VLATNGDTFLGGEDFDQRLIDYIIDEFKKEQGIDLKQDVMALQRLKEAAEKAKIELSS
                     GQQTEINLPYITMDATGPKHLAMKITRAKFESLVEDLIARSIEPCRTALKDAGLSTGD
                     IDDVILVGGQSRMPKVQEAVKDFFGKEPRKDVNPDEAVAVGAAIQGEVLSGGRSDVLL
                     LDVTPLSLGIETMGGVMTKLIQKNTTIPTKASQVFSTAEDNQSAVTIHVLQGERERAS
                     ANKSLGQFNLGDIAPAPRGMPQIEVTFDIDANGILHVSAKDKGTGKAANITIQGSSGL
                     SEEEIERMVKDAEANAEEDKKLTELVASRNQAEALIHSVKKSLADYGDKLDAAEKEKI
                     EAALKEAEEAVKGDDKTAIDAKAEALGTASQKLGEMVYAQAQAEAQAGEGAQANASAK
                     KDDDVVDADFEEVKDDKK"
     gene            2715..4641
                     /locus_tag="ACFJAG_001808"
                     /pseudo
     CDS             2715..4641
                     /locus_tag="ACFJAG_001808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712496.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
     gene            4698..5675
                     /locus_tag="ACFJAG_001809"
     CDS             4698..5675
                     /locus_tag="ACFJAG_001809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HFC3981041.1"
                     /translation="MDMKRRDFLKMTAALAAAGVSPSLLTAGKEQFTVYGAPAMPSVT
                     IAVTALQGKLAKQADVSLKIWRSPDQLRAGVASGQFKVMMSPSNVGVNLRNQGQKVGM
                     VNILTNGITQLVCKGSAIASPQDLVGKKILVPFKNDMPDIVLQALLKKLKIDAHKVSI
                     TYAATPPEAVGLFPSKGYHAVILPEPMATASLLKGKTIGINVVHGFDLVKAWGQAFGT
                     KPLIPMAGIIANEEYFHAHKAQFDIFHQDLKNALNWILANRQNAAKIGKNYLPAPEPA
                     LVMGLDGARLTVSKGSEVKNEILKFYEILMQFNPELLGGKLPDNGFFLA"
     gene            6012..6149
                     /locus_tag="ACFJAG_001810"
     CDS             6012..6149
                     /locus_tag="ACFJAG_001810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981042.1"
                     /translation="MNEDKYRENMTWDEIENVVGTLVSEERMLKSNSFLSIKNSKNRL
                     A"
     gene            6228..6997
                     /locus_tag="ACFJAG_001811"
                     /pseudo
     CDS             6228..6997
                     /locus_tag="ACFJAG_001811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003776012.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
     gene            7024..7716
                     /locus_tag="ACFJAG_001812"
     CDS             7024..7716
                     /locus_tag="ACFJAG_001812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HFC3981043.1"
                     /translation="MLCLENVRFEILRDPIVRDFSLNLQQGEVKALFGPSGCGKTTVL
                     RLIAGLETPKSGTIRNTFHKTGFLFQENRLPENLTAMQNIAIFMDNPDEGEIVALAAK
                     VGLTAGDLNKYPTELSGGMAKRVAFLRLLLCGCDLALLDEPFVGLDRDLRDILVAMLV
                     EKIERQGMACILVTHDRFEAARLSHEIMLLSAKGMNVQNVITLPTPLSERDSAFEEVV
                     VAREFQGIHYYE"
BASE COUNT         2230 a         2017 c         1966 g         1740 t
ORIGIN      
        1 aattatgatt tttcttatcc aatacataat ttttcagatt ttccataggt ttaatcccga
       61 attgacagaa aaaggataga aaaatgaaga aaaccagcaa atatcttatc tatactgcgg
      121 catttacctc attctgcttt gccttccaag aaaaccgttc tgaagccaaa cagcccgaca
      181 tcactttatc cgcatccctg tgcgaacaat tcaacatgct gaacgccaaa gatatggata
      241 cagaacaagt ctccctttcc aaagaatgcg acatcatcga gtcttcacac gactgggaaa
      301 aagagtacgg caacttgaac gaacaggaaa tgctcgccgg cgtcgtctat gaataaacct
      361 gcctgccatt tgaaacatta tgcttgaatg cattggagcc aaatgtatta aatcaaatat
      421 aaaaccaata tattcataaa gttatatact tatggccatg ctgtagcttg aaacagcccg
      481 ccgcccgccc tatttacagc ccatcgggac aaaatgttcc aacatatttc tcaaaataag
      541 caaaatcaaa taggagtatc cacatggcaa aagtaatcgg tatcgactta ggtacaacca
      601 actcttgttt ggccatttcc gaaaacggtc aaaccaaagt catcgaaaac gcagaaggcg
      661 cacgcaccac gccgtccatt atcgcttatt tggacggcgg cgaaatcctc gtcggcgcgc
      721 ctgccaaacg ccaagcggta accaacgcca aaaacactat ttacgccgcc aaacgtttga
      781 tcggtcacaa atttgaagac aaagaagtcc aacgcgacat cgaatctatg cctttcgaaa
      841 tcatcaaagc cgacaacggc gacgcatggg taaaagcaca aggcaaagag ctgtctcctc
      901 ctcaaatttc cgcagaagtc ctgcgtaaaa tgaaagaagc cgccgaagct tacttgggcg
      961 aaaaagtaac cgaagccgtg attaccgtcc ctgcctactt caacgacagc caacgtcaag
     1021 ccaccaaaga cgcaggccgt atcgccggtt tggacgtaaa acgcatcatc aacgagccga
     1081 ccgcagccgc tttggcattc ggtatggaca aaggcgacaa caaagaccgc aaagtagccg
     1141 tatatgactt gggcggcggt accttcgata tttccatcat cgaaatcgcc aacctcgacg
     1201 gcgacaaaca atttgaagta ttggctacca acggcgatac tttcttgggc ggtgaagact
     1261 tcgaccaacg cttgattgac tacatcattg acgagtttaa aaaagaacaa ggcattgatt
     1321 tgaaacaaga cgtaatggct ctgcaacgtc tgaaagaagc tgccgaaaaa gccaaaatcg
     1381 aattgtccag cggccagcaa accgaaatca acctgccgta cattaccatg gacgcaaccg
     1441 gcccgaaaca cttggcaatg aaaattaccc gcgccaaatt cgagagcctg gttgaagacc
     1501 tgattgcccg ctctatcgag ccttgccgca ccgcattgaa agatgccggc ttgagcaccg
     1561 gcgacatcga cgacgtgatt ttggtcggcg gtcagtcccg tatgccgaaa gtacaagaag
     1621 ccgttaaaga cttcttcggc aaagaaccgc gcaaagacgt gaaccctgac gaagccgttg
     1681 ccgtaggtgc agcgattcaa ggcgaagtat tgagcggcgg ccgcagcgac gtattgctgc
     1741 tggacgtaac ccctctgtcc ttgggtatcg aaaccatggg tggtgtgatg accaagctga
     1801 ttcaaaagaa cactactatt ccgactaaag cgtctcaagt gttctctact gccgaagaca
     1861 accaaagcgc agtaaccatc cacgtactgc aaggcgaacg cgaacgcgct tctgccaaca
     1921 aatctttagg tcaattcaac ttgggcgaca tcgcacccgc accacgcggt atgccgcaaa
     1981 ttgaagttac tttcgacatc gacgccaatg gtatcttgca cgtttccgcc aaagacaaag
     2041 gcactggcaa agcggccaac attaccatcc aaggttcttc aggtttgagc gaagaagaaa
     2101 tcgaacgcat ggtgaaagat gccgaagcca atgccgagga agataaaaag ctgactgaat
     2161 tggtcgcttc ccgcaaccaa gccgaagccc tgattcactc cgtgaaaaaa tctttggcgg
     2221 actacggcga caaactcgac gctgccgaga aagaaaaaat cgaagccgcg ctgaaagaag
     2281 ccgaagaagc cgtgaaaggc gacgacaaaa ccgccatcga tgccaaagcc gaagcactgg
     2341 gcacagccag ccaaaaactg ggcgaaatgg tttacgcgca agcgcaagcc gaagcccaag
     2401 ccggcgaggg cgcacaagcc aatgcttctg caaagaaaga cgatgatgtc gtagatgccg
     2461 actttgaaga agtaaaagac gacaaaaaat aattgatgcc gtctgaaaaa aacgcgaacc
     2521 attcggttcg cgtttttttc aattgagata aaagacaata gcatgacaga gattccaaat
     2581 tcatctaccg tgatattccc aagcccaagt tccaactgtt gcatcggtta tctggaaatt
     2641 tttcatatca ttttcttatt tacttaaatt ttttaataag ataataaata ataattatta
     2701 tcatgagcta agaaatgaaa ctaaatactc tcacatgggc tttgatgacc gttttttccg
     2761 ttgcgccatc ttgggcagaa caaccggcaa atactgaaga aatacaaccc gtcaaaacct
     2821 tctccccgcc caaaccgatt gcaccgaccg ccgcacaagg ctatttcccc gaaaaccaat
     2881 tcgaccgctc cgaccgcagc gattattact ttgttaccga aaacatagac caagccttcc
     2941 gtccgctgaa ggcaaacagc agtttttacg gcaaaagctt ttacaactcc gttaccgcgc
     3001 aagcactcgg ggcgaaggta tacggcgtag ccaacctcaa tcgcaccaag gcaaacggct
     3061 acaaagatgg cggtgggcgc gacaccgatt ggaaatacag ccgcttcaat caggctttgg
     3121 tactcggttt cgtgccgtct gaaaatcaag aataccgcct cacttatctg cacgacgaca
     3181 tcaacaacga ccgccagccg caggtcgtca acgacgcatt ggacaccgaa cgccacatct
     3241 ccaaactcaa cgtgcgttgg ggcaatgccg atttgagcaa tacggtcagc gcggaagcag
     3301 gcgtcatcaa actcaaacgc catgccgaca attactcctt gcgaccaaac aacacgccgc
     3361 agcaagtgtt cgtagaactt gaccgcaaag tgtatgattt ctcgctcaaa cacgatgcgg
     3421 atttcggcaa attccacaac acggcagccg tcagctaccg caacgacagc caaaacggcg
     3481 aacgcaacac ccacactgcc atgtgcgatt tcctcaacgg ctaccgtttc gccgatgtgc
     3541 acatcgaccg ctggtgcatt gccgatacct tatcttacaa gtttgacgac cgacacaaac
     3601 tgggcttggg cttgggctta agctacgaac tcaacgaagc ggacattcgc aaaaatacgg
     3661 cacagcctga aaacccaata aaacccggtt tccccttcgc ctcatcacaa caaatctgga
     3721 aaacccatta cggctacgac ttcaacggca aagtgcgccg tcatgctttg tcgggcgaac
     3781 tcaaatacga tttcacgccg tctgaaacgc aaaaatacag cgtttccctc gcgcatttgg
     3841 aacgcatcgg cgacaacacc gaacgcttca actcgcttgc tgccatcgtg caaaaccgta
     3901 tgagcggcat gctgatgaac caaaatccag ccgccgccat tgcaggcaat ccccctgctg
     3961 aaaactgaaa aacacaaccg catcaggctc accgccgaca gccgcaacga ctactacaac
     4021 ggctacatga actcgctcgc aggcgcgggc tggaacgtgg gcggcacgct tgtggcggac
     4081 aaagtcaaag acctgattat ttttgaccgc gcacacggac aaagcggcac agcttccaaa
     4141 gacggcggca tcatcacacg caacgtggac gcacgattgt ttaccgcgca ggcctacgcg
     4201 cgttacaact tcaatccgca ttgggcggca ggcatcaaag ccgcctacaa ctacggacac
     4261 aacgaaaccg acggcaggcc gccctatcaa atccgtccgt ttgaagccgc cgtccaagcc
     4321 gactacaaaa actactttgc ccacggcagc tacaacatcg gcgcggcaac acgctttgtc
     4381 gccaaacaaa cgcgcggtga ttttgatatg gcaagcggtc tgggcataga caaacgcgaa
     4441 gccgccaaag gctttaccgt tgccgacgtg tacgcaggcg taaacatcaa agacaaatac
     4501 ggcttgcgct tgggcgtgaa caacgtattc aacaaaaaat acgtcgaata catcagcggc
     4561 gaccacgtcc tcgccctatc ccccagcgta gtgtatgcac cgggcaggac atattggttg
     4621 agtttgcatg cggcatttta aaaccatgcc gtctgaaaaa tacctgcatt ggcttattaa
     4681 gaattaggag ataaaaaatg gatatgaaaa gacgcgattt cttaaaaatg accgccgcgc
     4741 tggcagccgc aggcgtttcg ccttctctgc ttactgccgg taaagagcaa tttaccgtgt
     4801 acggcgcacc ggcaatgccc agcgttacca ttgccgtaac ggcgttgcaa ggtaaactgg
     4861 cgaaacaggc ggacgtgtcg ctgaaaatct ggcgttcgcc cgaccaactg cgcgcgggcg
     4921 tggcaagcgg gcaatttaaa gtgatgatga gtccgagcaa tgtcggcgta aacctgcgca
     4981 accaagggca gaaagtcggc atggtgaata ttttgaccaa cggcatcacg cagttggtct
     5041 gcaaaggcag cgcgattgcc tcgccgcagg atttggtcgg caaaaaaatc ctcgtgccgt
     5101 ttaaaaacga tatgcccgac atcgtgctgc aagccttgtt gaaaaaactg aaaatcgacg
     5161 cacacaaagt cagcattacc tacgctgcca caccgcccga agcagtcgga ctatttccaa
     5221 gtaaaggtta ccatgccgtc atcctgcccg aaccgatggc aaccgccagc ctactgaaag
     5281 gcaaaaccat aggtataaac gtcgtgcacg gttttgattt ggtaaaagca tgggggcagg
     5341 cgtttggcac caaaccgctg attccgatgg caggtatcat cgccaacgaa gaatatttcc
     5401 acgcacacaa ggcgcagttc gacatcttcc atcaagattt gaaaaacgcg ctcaactgga
     5461 tattggccaa ccgccaaaac gcggcgaaaa tcggcaaaaa ctacctaccc gcccccgaac
     5521 ccgccctagt catgggcttg gacggcgcac ggctgacggt aagcaaaggc agcgaagtga
     5581 aaaacgagat tttgaagttt tacgaaatcc tgatgcagtt caacccggaa cttttgggcg
     5641 gcaaactgcc ggataacggg ttcttcttgg cttaaaggga aagaggccgt ctgaaaaggg
     5701 tagggtggtt gtgaatacct gatttatcat ttttcagacg gcctattaag gcattgtcag
     5761 cggcgtgggt cggattcttg aatccgacat ttcggctaaa cggggctgtc ggatacaagt
     5821 atccgaccta ctcttttcag acggcctatc agataatagt tcgaacagta cacaaagagc
     5881 cgtcggattg cctgaaatgt tgggtcatga cccaacctac gcttactggg gaaacgggat
     5941 cgaagtgtga ggtatgtggc ggggttgttt aataatgaaa ttttataact atttgatagg
     6001 gtggtaatgc catgaatgaa gataaatata gggaaaatat gacatgggat gaaattgaaa
     6061 atgtagtagg aactttagtt tctgaagaaa gaatgcttaa atccaatagc tttttaagta
     6121 ttaaaaatag taagaatagg ttggcttaat cacaaccata acccaacgac aatactaaaa
     6181 ttccaagcta aggctatcct ttccaaacca tccccatcaa ccaaaccatg attaaaaccg
     6241 acaaaatccg caaaccgcag cctgcgctgt tttacatcat cgactacctt tggagcggct
     6301 ttgccggtct gagcgtggcg atggtggtgg tggcgttgtg ggcgtggggc agcgccgtgt
     6361 tcggcgagtt tatgctgcct gcgccggtag aggtgtttca aaaatctttg gatttattga
     6421 aacattttca ggaaaatgaa atcgggattt cgctgtggcg gtcggtagtg ggtattccgg
     6481 ttgctttgat agcaggattg gcggcggggc tggtggcggg cagttttaag acggcgatgg
     6541 cgttgcttaa gcctgtgatt acgattttgt tagcaatgcc gccgattatt tgggtggtga
     6601 tggcgttgtt ttggttcggg ttcggcaatc cgagcgtgtt gtttaccatc attgtgttgg
     6661 ttgcgccgct gacgtttgcg agtgcggcgg tcggaatggc gagcgtgaac aagcagcatg
     6721 aggagttgtt tgacgcttat aaattaggcc gtctgaaaaa aatccgctat ctgtatatcc
     6781 cgcatctgac ggactatgtg atttccagcg tcggcgtggc ggtggcgacg ggggtgaagg
     6841 cggtgatcat ggcggaactc ttaggcgcga gcaaaggcgt gggcgcgcgg attgcggacg
     6901 cgagggcaat gctgtagact tcgacggtaa tggcttatgt ggtgttggtc atggtatttg
     6961 tgtcgctgtt tgaatacctg attccaagcc tttgtaaatt ttgtttatgc cgtggaggag
     7021 atgatgctct gtcttgaaaa cgtgcgtttt gaaatcctcc gcgaccccat cgtgcgcgat
     7081 ttcagtttga acctgcaaca gggcgaagtc aaagccttgt tcgggccgag cggctgtggc
     7141 aagacgacgg ttttacggct gattgcgggc ttggaaacgc cgaaatcggg cacgatacgt
     7201 aatactttcc acaaaacggg ttttctgttt caggaaaacc gcctgccgga aaacctgacc
     7261 gcgatgcaga atatcgcgat ttttatggac aacccagacg aaggcgaaat cgtcgcgctg
     7321 gcggcgaaag tcgggctgac tgcgggcgat ttgaacaaat atccgaccga attgtccggc
     7381 ggcatggcga aacgggtggc gtttttgcgc ctgctgctgt gcggctgcga cctagccttg
     7441 ctggacgaac cgtttgtcgg tttggaccgc gatttgcgcg atattttggt tgctatgctg
     7501 gtggaaaaaa tcgagcggca gggcatggcg tgtatactgg taacgcacga ccgcttcgaa
     7561 gccgcgcgcc tgagccatga aattatgctg ctttccgcta agggcatgaa cgtgcaaaac
     7621 gtgataaccc tgcccacgcc gctgtccgaa cgcgattcgg cttttgaaga agtcgtggtg
     7681 gcaagggagt ttcaggggat tcattattat gagtgatgag gggatttgag tgtctgacaa
     7741 accttacggt tcgttgccct ctccctaacc ctctcccacg gggagagggt tagcaagcct
     7801 caggcttgcc tctttagcga aagatacgaa tctgttatcc gaacgcgatt cggtttttga
     7861 aaaagccgtg gtgccaaggg ggcaggggat tcattatgag gtgctttatg ttttcgactg
     7921 tgattactgc tgctgtttta tatattgcta cag
//
LOCUS       DAXFZM010000090         7520 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.090, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000090 DAXFZM010000000
VERSION     DAXFZM010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7520)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7520)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7520
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.090"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(95..301)
                     /gene="rpoZ"
                     /locus_tag="ACFJAG_001813"
     CDS             complement(95..301)
                     /gene="rpoZ"
                     /locus_tag="ACFJAG_001813"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HFC3981044.1"
                     /translation="MARITTEDCTGKISNHFDLTLVAARRARQLENGNTPLVDDVRNN
                     KPTVTALREIAAGHIGTELLTRNK"
     gene            complement(359..976)
                     /gene="gmk"
                     /locus_tag="ACFJAG_001814"
     CDS             complement(359..976)
                     /gene="gmk"
                     /locus_tag="ACFJAG_001814"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004385 - guanylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006163 - purine nucleotide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HFC3981045.1"
                     /translation="MSAYRKGNIFIISAASGTGKTTLVSRLLANHNGLRVSVSHTTRP
                     PREGEANGVHYHFVSKEEFESLIAQEAFLEYADVFGNYYGTSTEGVNALAAAGYDVIL
                     EIDVQGAAQVRNALPEAVGIFILPPSFDVLAARLKGRGTDSREVIQRRLSKARHEIEQ
                     SVLFDFVVVNDDLEKAEGDLLHIVNACRLKRSRQLGFIADLLENS"
     gene            1104..1703
                     /locus_tag="ACFJAG_001815"
     CDS             1104..1703
                     /locus_tag="ACFJAG_001815"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003999 - adenine
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0006168 - adenine salvage [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HFC3981046.1"
                     /translation="MALKTSNLEHAMLVHPEAMSVGALADKIRKIENWPQKGILFHDI
                     TPVLQSAEYFRLLVDLLVYRYMDQKIDIVAGLDARGFIIGAALAYQLNVGFVPIRKKG
                     KLPFETVSQSYALEYGEAAVEIHTDAVKPGSRVLLVDDLVATGGTMLAGLELIRKLGG
                     EIVEAAAILEFTDLQGGKNIRASGAPLFTLLQNEGCMKG"
     gene            complement(1749..2537)
                     /locus_tag="ACFJAG_001816"
     CDS             complement(1749..2537)
                     /locus_tag="ACFJAG_001816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HFC3981047.1"
                     /translation="MNPKIVFFDIDDTLYRKYTDTLRPSVKTAVAALRGKGILTALAT
                     GRSLATIPEKVRDMMAETGMDAVVTINGQFALLHGKTVREVPMDTGLMGRVCAHLDGL
                     GMDYAFVGGEGIAVSALSECVCRALQHIASDFFADKDYFSSKPVYQMLVFAEENEMPL
                     WSDIVEREGLKTVRWHEEAVDLLPAGMSKTDGIRSVVEALGLEMADVMAFGDGLNDVE
                     MLSEVGFGVAMGNGEQAAKEAAKYVCPGVDEDGVLRGLQDLGVI"
     gene            2862..4217
                     /gene="yegQ"
                     /locus_tag="ACFJAG_001817"
     CDS             2862..4217
                     /gene="yegQ"
                     /locus_tag="ACFJAG_001817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-hydroxyuridine modification protein YegQ"
                     /protein_id="HFC3981048.1"
                     /translation="MKAPELLLPAGGLERMRAAYDYGADAVYAGSPRYSLRARNNEFA
                     KLDVLEQGIKEAHERNKKFFLTVNTLPHNSKLKTFVADMEPLIAMKPDALIMADPGLI
                     MTVREKWPEMPIHLSVQANTTNYWGVKFWQNIGVERIILSRELGMEEIAEIRQECPDI
                     ELEVFIHGALCIAYSGRCLLSGYFNHRDPNQGTCTNSCRWDYKVHNATESEAGDAQLL
                     QGFNFEKAQEEANQNFEGINGQKRHPYADKVFLIEESNRPGEMMPIMEDEHGTYIMNS
                     KDLRGIEVVEKLAKIGVDSLKVEGRTKSLYYVARVAQSYRKAIHDAVAGRPFDYSLLS
                     ELEGLANRGYTSGFLERHQTQDYQNYLSGHSTAKQSQYVGHVTEIDENGWATIEVKNR
                     FAVGDSLEIIHPSGNQTIKLEQMTRKGQPVDVAPGNGIQVKIPNMQGKEKALIARVLN
                     P"
     gene            4348..4821
                     /locus_tag="ACFJAG_001818"
     CDS             4348..4821
                     /locus_tag="ACFJAG_001818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease"
                     /protein_id="HFC3981049.1"
                     /translation="MLAACQSGRALKNAHTASAGTPAGESCKVIRGDTAGGGKNIIYR
                     CSNGQAAINAATAAGVLESGIPVSFGGGVPVANGRNLVTRQAANGVGKSDSEACEHAL
                     INAARKFQQTAGKLGGRSVTGFHSYFGKQSLQGGQYDCQAGSFHVRVVMRANVVR"
     gene            complement(5030..7403)
                     /locus_tag="ACFJAG_001819"
                     /pseudo
     CDS             complement(5030..7403)
                     /locus_tag="ACFJAG_001819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222141.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent
                     hemoglobin/transferrin/lactoferrin family receptor"
BASE COUNT         1860 a         2138 c         1771 g         1751 t
ORIGIN      
        1 atttcagacg gctttcggga tgtatgtgtt ttttcatttc aaaccgtcgg actgcacggc
       61 ggcagagtgt gccggcgtgc gtttccggca gaatttattt attgcgcgtc aacagttccg
      121 taccgatatg cccggctgcg atttccctta aggcggtaac ggtcggtttg ttattgcgga
      181 catcgtccac aagcggcgta ttgccatttt caagctggcg ggcccgacgg gccgctacca
      241 atgtcaggtc aaaatggttg gaaatttttc cggtacagtc ttcggtggta atacgtgcca
      301 tattatttgc tttctttcaa aaatatttaa attgggaaac cggatatttt cgcggttttt
      361 aggaattttc caacaaatct gcaataaatc ccagttgccg cgaccttttc agacggcagg
      421 cattcacaat atgaagcaaa tccccctccg ccttctccag gtcgtcattg accacgacaa
      481 agtcgaacaa tacggactgt tcgatttcat gccttgcctt cgacagcctc ctttggataa
      541 cttcccgact gtccgtcccg cgccctttga ggcgcgcggc aagcacgtcg aaagaaggcg
      601 gcaggataaa gataccgaca gcttccggca gcgcgttgcg aacctgcgcc gcgccctgaa
      661 cgtcgatttc caaaatcacg tcatagcctg ccgccgccaa cgcattcacg ccctccgtgc
      721 ttgtgccgta atagttgccg aatacgtctg cgtattccaa aaaagcctcc tgcgcgataa
      781 gcgattcaaa ctcttctttg gaaacaaagt gataatgtac gccgtttgct tcgccttcac
      841 gcggcgggcg cgtcgtatgc gacacggaaa cgcgcaaacc gttatggttt gccaacagcc
      901 gcgacaccag cgtggttttg cccgtgccgg aagcggccga aatgataaag atgttgcctt
      961 ttcgataagc ggacatattt tttacctgta tattttccaa ccgattgtat cacaacggac
     1021 accctatttc atatttgccg atgcccatat tttgccgcta ttgttttgat tgatttggca
     1081 agcggcaggc tgacggctac aatatggcgt taaaaacatc aaacttggaa cacgcaatgc
     1141 tggttcatcc cgaagctatg agtgtcggcg cgcttgccga caaaatccgc aaaatcgaaa
     1201 actggccgca aaaaggcatc ttattccacg acatcacgcc cgtcctgcaa agtgcggaat
     1261 acttccgcct tttggtcgat ttgctggttt accgctatat ggatcagaaa atcgacatcg
     1321 ttgccggctt ggacgcgcgc ggcttcatta tcggcgcggc actcgcctac cagctcaacg
     1381 tcggcttcgt ccccatccgc aaaaaaggca agctgccttt tgaaaccgta tcgcaaagct
     1441 acgcgctcga atacggggaa gctgcggtgg aaatccacac cgatgccgtc aaacccggtt
     1501 cgcgcgtcct gctggtcgat gatttggttg ccacgggcgg cacaatgctt gccgggctgg
     1561 aactgatccg caaactcggc ggggaaattg tcgaagccgc cgccattttg gaatttaccg
     1621 accttcaagg cggcaagaat atccgcgcaa gtggcgcgcc cttatttacc ctgcttcaaa
     1681 acgaaggctg catgaaaggc tgaaaaccga ccctgccgtc tgaaaccggc agggttgtta
     1741 ttatacgttc aaatcacacc caaatcttgc aagcccctca acacgccgtc ttcatcaacg
     1801 ccggggcaaa catatttcgc cgcttctttc gctgcctgtt ccccgttacc cattgccacg
     1861 ccgaacccga cttcagacag catttccaca tcgttcaaac cgtcgccgaa cgccatcacg
     1921 tctgccattt ccaaacccaa tgcttcaacc acgcttctga tgccgtctgt tttcgacatt
     1981 cccgcaggca gcagatcgac cgcttcctcg tgccagcgca ccgttttcaa gccttcccgt
     2041 tccacaatat ccgaccaaag cggcatttcg ttttcctccg caaacaccag catctgatac
     2101 accggtttgc ttgaaaaata atccttatcg gcaaaaaaat cgctggcgat atgctgcaag
     2161 gcgcggcaca cgcattccga cagcgcggac acggcgatcc cctctccgcc gacaaacgca
     2221 taatccatgc ccaagccatc caaatgcgca caaaccctgc ccatcaaacc ggtatccatc
     2281 ggtacttcgc gcacagtttt accgtgcagc agcgcaaact gtccgtttat cgttaccacg
     2341 gcatccatac ccgtttccgc catcatgtcc ctgacctttt cgggaatcgt cgccaaagac
     2401 cgccccgttg ccaacgccgt caatatacct ttgccgcgca aagccgccac cgccgttttc
     2461 acggaagggc gcaaggtatc cgtatatttg cggtacagcg tatcgtcaat gtcgaaaaac
     2521 acgattttgg gattcatcat attctctctc gcactcaaac tgccgcattg tatcccaaga
     2581 aggcaaatac ttgataaatc cttataaatt tcccggcaaa attgaccgcg aacacgaaaa
     2641 ggcggataat ccgcccatct tcaaacaccc ttcagacggc atttgcagca atgccgtctg
     2701 aaacattttt acaaagcata caaatcatgc ttcaacacac aggacgacac ataaagcacc
     2761 gccctatatg tcgtcctgat tcggaagggg ttacgcccct cccaaataaa gtctgatcct
     2821 gccgccctaa agggcggggt ttcaaccgaa aaggaaacac gatgaaagca cccgaactct
     2881 tattgcccgc cggcggattg gaaagaatgc gcgccgccta cgattacggc gcagatgccg
     2941 tttacgccgg cagcccgcgt tactccctgc gcgcccgcaa caacgaattt gccaaactcg
     3001 acgtcctcga gcaaggcatt aaagaagcgc acgaacgcaa caaaaaattc tttttgaccg
     3061 tcaacaccct gccgcacaat tccaaactca aaaccttcgt tgccgacatg gagccgctga
     3121 ttgccatgaa acccgacgcg ctgattatgg cggatccggg tttgattatg accgtgcgcg
     3181 aaaaatggcc ggaaatgccg atccatctgt ccgtacaggc gaacaccacc aactactggg
     3241 gcgtgaaatt ttggcagaac attggtgtcg aacgcatcat cctgtcacgc gaattgggca
     3301 tggaagaaat tgccgaaatc cgccaagaat gccccgacat cgaactcgaa gtcttcatcc
     3361 acggcgcatt gtgcatcgcc tactcaggcc gctgcctgtt gtcgggctat ttcaaccacc
     3421 gcgatcccaa ccaaggcacc tgcaccaact cctgccgttg ggactacaaa gtccacaacg
     3481 ccacggaaag cgaggcaggc gatgcccagc ttctgcaagg tttcaacttt gaaaaagccc
     3541 aagaagaagc caaccaaaac tttgaaggca tcaacggtca aaaacgccat ccctacgccg
     3601 acaaagtttt cctgattgaa gaatccaacc gcccgggcga gatgatgccg attatggaag
     3661 acgaacacgg cacctacatc atgaactcca aagatcttcg cggtatcgaa gtcgtcgaaa
     3721 aactcgccaa aatcggtgtg gacagcctca aagtcgaagg ccgtaccaag tctctctact
     3781 acgtcgcccg cgtcgcccag tcctaccgca aagcgattca cgatgccgtc gcaggccgtc
     3841 cgtttgatta cagcctgttg agcgaactcg aaggccttgc caaccgaggc tacaccagcg
     3901 gcttcctcga acgccaccaa actcaggatt atcaaaacta cctcagcggc cattccaccg
     3961 ccaaacaaag ccaatacgtc ggacacgtta ccgaaatcga cgaaaatggc tgggcgacca
     4021 tcgaagttaa aaaccgcttc gccgtcggcg attcgctcga aatcatccac ccgagcggca
     4081 accaaaccat caaattggaa caaatgaccc gcaaaggcca acctgtcgat gttgccccgg
     4141 gcaacggcat tcaggtcaaa atccccaata tgcagggcaa agaaaaagcc ctcatcgcac
     4201 gcgtgttgaa cccctgagcc acaatgccgt ccgaaccccg ttttcagacg gcattttgtt
     4261 gaatcttact gtacaatggc aatgatttcc cacagcaaac aaggacatcc gacataaaaa
     4321 atcctcatac tctccgccgc cgccctgatg ctggcagcct gccaatccgg ccgcgcgctt
     4381 aaaaacgcgc acacggcatc cgccgggaca ccggccggag aatcatgcaa agttatccgc
     4441 ggagacaccg caggaggcgg caaaaacatc atttaccgtt gtagcaacgg tcaggcggca
     4501 ataaatgcag ccaccgccgc cggcgtattg gaatcaggga ttcccgtcag cttcggcggc
     4561 ggcgtaccgg ttgcaaacgg caggaatcta gttacacggc aagcggcaaa cggcgttggc
     4621 aaatccgact ccgaggcctg cgaacacgcc ctaatcaatg ccgcccgcaa attccagcag
     4681 accgccggca aactcggcgg gcgcagtgtt accggcttcc acagctactt tggcaagcaa
     4741 tcgctgcaag gcggacaata cgactgtcag gcaggttcgt tccacgtccg cgtggtcatg
     4801 cgcgccaatg tcgtccgtta acatatcggc aatcaaaaaa tgccgtctga aacatttttc
     4861 agacggcatt tttaatcctg caacattact ccctgccctg agttcggata ctgtatcaat
     4921 ataaaacccc atcacacaga tttacggtaa aaagccgtcc gaatgagttc ctgaaaacaa
     4981 ttcggacagc tttaatcccc aacgaggcaa ttaatccaat aatactagat taaaacttcc
     5041 attccagcga tacggcgtaa ttacggcctg aggcgcggta gcggtctaag cctttgccat
     5101 ctcggtcgac cgcgttggtg gtgctgtagc tatacaaacc gcgcagggaa tcccaagtgg
     5161 tgtatttgcg gttgaacaca ttatatacgc ctgcacgcaa agtcaggttt ttagccggtt
     5221 tgtagaagcc gtacatatca aacacataag ccgacttgtt cagccacggg taatctttta
     5281 cctttttctg caaaggcgta ccccggccct tgttttcata aacggtgtat tgcgcgtctt
     5341 tggccttttt cgcacccaga taagtcaggc gggagaacac accccatttt tcgctcgggc
     5401 ttcgtagtcg acaccggcaa tcactttcgg cggctgtgtg gacagcaggc tgttgtcgcc
     5461 cgacagtttg cttttcgcat aacccagcga gccgaacaat ttccagccct caggaacaaa
     5521 agacgctatt ttgtccacat tcagacggcc tgtcagctca agaccacgga ttcgggcctt
     5581 atcgatattt tgcatctgcc attccggttt ttcggaataa ggattgctac acataccgta
     5641 gtagtaattc atctgagtac agccgacatc gccgctggtg gtcagcttct gctcttcaga
     5701 caagaagttg cggtaattgt tttgatacag gttggcatcc aaagtacctt tttcgctgcg
     5761 gccttgcaga gacagggtgt gggtggtgct gcgctcggct ttcaggttgg gattgggcag
     5821 ccaattaccc gaaccgtggt tgtaagtgaa atacacttcg gacgcattgg ggacacggta
     5881 gccggaagta atgtcgtaac cgacatgcca agcctgattc agttgcgccg ccaaaccgac
     5941 aaatccgctc cagcctttat aagtattggc tgcaggcggt gttttgtcac aagcatgaca
     6001 ctcggcattc aattcctgag gcgtcatttt ggtatgatcg taacggatat ctgcacgtct
     6061 gctgaacacg tcgttccatt ggatttgatc agacagtgag aaaccataat tagtggtttt
     6121 cacagggtgt tgaatcgagc tggtagtacg ggatatctgt ccgctgaagt aataatcgtc
     6181 gcggtttaag ttttcaaact cacgccgact ggcgaaagtt ttaaacgaca agcgatgttg
     6241 gccgcccagt tgcaacggtt ggctgtccat acgcaaagta aaacgtttga atcgggtgtc
     6301 catgctgcgg ttgtatattt cgtccaaatc cttctgattt atagttgcgc gtccaggtgg
     6361 aataatccat cgggaacgag cctttgttgt taaccgccgc cactttggtt ttctgataat
     6421 cgaagtccgc cttcaaagac gacaaccaat ttgaatcagg cgtccattcg taaaagaggt
     6481 tggcattgcg ccgtctgttt acgtcatcgg cttcgcgcca ggaagaagcg gtcaggttat
     6541 aagactcttc aaatcgtgta attatgcccc tgctggccgt taaacgatgc gccgatgcgg
     6601 tgcttgtcgt tgatttgata agcaatctta cccaagaagt tgtggtattt gtgtttggac
     6661 ggatcaggga taccgcgtgc cgaaccacgg atattcgctc cgctgccagc accctctacc
     6721 ggatagccac gctcgcccgc gctttcggtc tcatgaccgc gacgttgcga atacagcaaa
     6781 gcggcatcca cgcggtcgtt gctcacaccg aaaccgagtg tatttgtcca ttcgcggttg
     6841 cggctgctgt aaccgttttt catcatcacg ccgaattgcc tgtcgtccaa cagcaaatca
     6901 tggccttgca gggtttggta attcacgccg ccacccaatg cgccgctacc ggtattgaaa
     6961 gagtcagcgc ccttcgcgat ttcgatgttg cgcacgagtt cggggtcgat agacaggcgc
     7021 gagctgttga agttgccata acgtgcatac agtgagtttt cttccgaatc aggcaggctc
     7081 acgccgtcaa tgctgacacc gacacggttg ccttccacgc cgcgcacagc aaagcctttt
     7141 tgatggcggc cgctatcgct caagccgacg tcggtggagt aacgcaccaa gtctttgttg
     7201 tcgcgtatca tttcctgttg aatgcggccg aggttgacac gttccacggt tgcaggcgca
     7261 ttaagctggt ctttaacgcg cacttctttt atctctgctt taacgggtgt ggtttcggtt
     7321 gcagcttcat ccgctgccaa gaccggattg ccgaaaatac tgccgaccag cgcggcaata
     7381 ggaagcatgt gtaatggttt catattatca actcaagatg taatggattg ttcatccatc
     7441 agttaattca taataaattt tctgataatc attaatattt aataagacag caacccgtac
     7501 aaataaatct gtgtcgtgta
//
LOCUS       DAXFZM010000091         7333 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.091, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000091 DAXFZM010000000
VERSION     DAXFZM010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7333)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7333)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7333
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.091"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..1078)
                     /locus_tag="ACFJAG_001820"
     CDS             complement(<1..1078)
                     /locus_tag="ACFJAG_001820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLxRFG domain-containing protein"
                     /protein_id="HFC3981050.1"
                     /translation="MSDLVRYDPLEHGRLVGGLKEYRGFTQKDARAAADDTALTRGFK
                     NSMRSARMGWNALTGDKEELGRLKAEDMDYRKIQEGRKSQARRELGEAWEKGGGVGGG
                     LSNVWGELKKDWREKGLDGALEDVGEMAGAVLEQAPNALVPIATTTAGGILGALAGGN
                     AAVGAYAGATLGNTLMEYGGQLDRAAEAAGVDPADKDAVMAFIGRGAPGALKNAAVKG
                     AVVGAADMAAMKLGGSILNMGKKAAGKAALEKMGVAAAVAAAKGTPEFAALAKESAKG
                     GLGGAARHAAAYATESAGEFAGEYLGTGLANGEWDEKGAALEAFSSLGHSAVGFAGTK
                     AYAAVTDPLRPPAGRKAGAEGGIGG"
     gene            complement(1075..2271)
                     /locus_tag="ACFJAG_001821"
     CDS             complement(1075..2271)
                     /locus_tag="ACFJAG_001821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981051.1"
                     /translation="MGLFEPSAGDFWEMKEKEKKEKARKGAEERERAAAQAHRADAVR
                     RTVANYEAGPARYRNVMDLSRNNIEDGARRLRRAGAFERGADAGLGFSGGDKALSPDA
                     RAGADFARRDTRPTDAGGRTPPPLGFDGNVYRDGKPVRDFDAQRPLVSAGPDALSPEE
                     RELYRRATTPYAGALNGQLTAAQLNAARGIVAEHNKNAAVRELGRERLAAAAAENAAN
                     REAVLQKGRFDAAVKANEGALNREMAQRNADRAFDVQQAELGMKRQGFEMKREADALE
                     LEDRKRIADLTRAYGFAKSDGQRGEIARQIDALNGKFERQGEKGFDPNVFKTISYEVA
                     DPDTGLTAKREGIVDLRTGKPLDVEFAGEREKRYAALGFKPNGQKTAGGKIIYENEKG
                     EKRVEQ"
     gene            complement(2508..4775)
                     /locus_tag="ACFJAG_001822"
     CDS             complement(2508..4775)
                     /locus_tag="ACFJAG_001822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981052.1"
                     /translation="MEALLMGTDVPETGVLPDKNGEPLTIGEYRLFVGEMMNQPAWRA
                     VADKEMDYADGRQLDNELLQKQRELGLPPAVENLITPTLLSVQGYEATIRTDWRVTAD
                     GETGGRDVADALNFKLNRAERQSRADKACSDAFRGQIACGIGWVEVTRNPNPFEFPYE
                     CGVIHRNAIHWDMKSYKYDLSDARWLIRRRWLLPERLAQFFPEYAGHFKAMGRGGSDW
                     RISGEMLDGGGNTGLADAWGISGRNTVSEEFWFNETTRELAVAEVWYRRWVTADCLRD
                     KKTGRTVEFDGANPNHREMAANGAVLFAASVPRMRRAFVVGDLVVRDEPTPYPHQKFP
                     YVPFFGFREDNTGIPYGYVRNMKYAQDNLNSTNSKLRWGLSAIRTVRTKGIVDMSDEQ
                     FRRNIARVDADIVLNKIEAAQPGARFDVSRDFELSAQHWQMLQDSRATIRQISGITPS
                     FMGNRGNATSGRQESIQVEQSNQSLGLVMDNFRQSRSLVGELLLAMIIEDLGSDEQTV
                     VIEGDAITQGRTVVINRPETDPVTGKAYLSNDLQNIRLKVALEDVPSTNSYRSQQLGA
                     MSEAVKSLPPEYQAAVLPFMVSLMDIPFKDKVIEKIKEVRVQETPEQIEARIAQAVQD
                     ALAKSGNDIKRRELALKEQRTASEIKEIEARAVQIGVQAAYAAMQAGGQIAAMPQIAP
                     VADAVMQGAGYVRPARGDDPGFPVPAMPPETQIPPEGIPEAYGADTGPMTAVPPKSAN
                     HAQTGMETPTVSDNL"
     gene            complement(4760..6034)
                     /locus_tag="ACFJAG_001823"
     CDS             complement(4760..6034)
                     /locus_tag="ACFJAG_001823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PBSX family phage terminase large subunit"
                     /protein_id="HFC3981053.1"
                     /translation="MTGKTVDLKLPAKLDGLFKPCRYKVMYGGRGGGKSHGAASALLA
                     LGAQRPLRILCAREIQKSMRDSVHRLLKDKVAQLGLGHFYEITDFEIRGANGTLFVFS
                     GLQSHTVDSIKSFEGIDIVWVEEGHGVSKKSWDVLTPTIRKEGSEIWITLNPDMETDE
                     TYRRFIAMPSEDTWLCEINWRDNPWFPEALNRERLKAQRSMNKEDYGNIWEGRPRMVS
                     EGAVYRHEIQDAFHSGRVTLVPYDSSLPVHTVWDLGWNDAMTIGLVQRDLTSVRIIGY
                     IEDTHRTLDWYVAELEKLPYRWGTDFLPHDGRTRNFQTGKSTMEILTGLGRKSVFVQN
                     AAGIEEGIRAARMLFPKVYFDKDKTARLLECLKRYGRQIHAKTGVAMGPLHDEYSHGA
                     DMFRYLAQAVDLMDTGSNTGYTETPVSDWRLY"
     gene            complement(6015..6257)
                     /locus_tag="ACFJAG_001824"
     CDS             complement(6015..6257)
                     /locus_tag="ACFJAG_001824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981054.1"
                     /translation="MAENLSKSAEQIVAELYGSPEDTFTKARMFQTVAAGFKVLVEIE
                     RKSYGMDTAESKISESAKTAGIRIEFVGPEDDGKDG"
     gene            complement(6312..6554)
                     /locus_tag="ACFJAG_001825"
     CDS             complement(6312..6554)
                     /locus_tag="ACFJAG_001825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981055.1"
                     /translation="MPRLSDEDWRKVELDYRRGVLSIAEIGRKYNVSAQHVGRVAKER
                     VWTRDLNDEVQAKARAMVLSADKNGNAPDYADFNLK"
     gene            complement(6554..6976)
                     /locus_tag="ACFJAG_001826"
     CDS             complement(6554..6976)
                     /locus_tag="ACFJAG_001826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981056.1"
                     /translation="MSGLSDIDKVYQGVVDLHNAEQVVSREALAETTGLKMSEITKFT
                     KLLVEHGKIYRVTRGIFKPAIGFGETRPVSVSVLDSGMGVLEIGDTVLHLNPQEMRSL
                     GALMSGFGQQFSSIQMGREFSVLRNYLECSAKNGRLDF"
     gene            complement(7041..>7333)
                     /locus_tag="ACFJAG_001827"
     CDS             complement(7041..>7333)
                     /locus_tag="ACFJAG_001827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HFC3981057.1"
                     /translation="FVYGKHASSIDHINRDKTDNRISNLRDVTHAENMKNRGKFKNNT
                     SGHTGVYFHKPSKKWQARIMVNRKNKILGLFEHIEDAVKAREAASKDFGFVV"
BASE COUNT         1454 a         2520 c         1702 g         1657 t
ORIGIN      
        1 tgcccccgat acccccctcc gcacccgcct tccgtccggc cggcggcctg agcgggtcag
       61 ttaccgccgc ataagccttc gttccggcaa accccaccgc agaatgcccc aaagaagaga
      121 aagcctccaa agccgccccc ttctcgtccc attccccgtt tgccagcccc gtacccaaat
      181 actcgcccgc aaactcaccg gccgattccg tcgcataagc cgccgcgtgc cgtgccgcac
      241 cgcccaaacc gcccttggca gactccttcg ccagcgccgc aaattcaggc gttcccttag
      301 ccgccgcaac cgccgccgca acacccattt tctccaacgc ggctttcccg gcggcctttt
      361 tgcccatatt caaaatactg ccgccaagtt tcatcgccgc catatccgcc gcgccgacca
      421 ccgcgccctt gaccgccgca tttttcaacg cacccggcgc accgcggccg ataaacgcca
      481 tcaccgcatc cttgtccgca gggtcgacgc ccgccgcctc tgccgccctg tccagctgcc
      541 cgccgtattc catcagcgta ttgcccaagg tcgcgcccgc ataggcgccg acagccgcgt
      601 taccgcccgc caaagcgccc aatatgccgc cggcggttgt cgtagcaata ggaacaagcg
      661 cattgggcgc ctgctccagc accgcacccg ccatctcgcc cacatcttcc aaggcgccgt
      721 ccaaaccctt ctcgcgccag tccttcttaa gctcccccca cacattcgac aggccgccgc
      781 cgacaccccc gcccttttcc caagcctcgc ccagctccct gcgcgcttgg gatttgcgcc
      841 cctcctgaat cttccgataa tccatatcct cggccttgag ccggcccagt tcctctttgt
      901 cgcccgtaag ggcattccac cccatacgcg ccgaacgcat agaattttta aacccgcgcg
      961 tcaacgccgt atcgtcggcg gccgcccgcg catccttttg cgtaaagccg cggtactcct
     1021 tcaaaccccc gacaagccgc ccgtgttcca acggatcgta tctgaccaaa tcactcattg
     1081 ctcaaccctc ttctcaccct tctcattctc ataaatgatt ttaccgccgg ccgttttctg
     1141 accgttcggc ttaaagccca acgccgcata acgcttctcg cgctctcccg caaactccac
     1201 atccaaaggc ttgcccgtcc gcaaatcgac aatcccctcg cgcttcgccg tcaagcccgt
     1261 atccgggtcg gcaacctcat aactgattgt cttgaacaca ttcgggtcaa agcccttctc
     1321 cccttgccgc tcaaacttcc cgttaagcgc atcaatctgc cgcgcaatct ccccgcgctg
     1381 cccgtccgac ttcgcaaaac cataagcccg cgtcaaatcg gcgatgcgct tcctatcctc
     1441 aagctccagc gcatccgcct cacgcttcat ctcaaacccc tgccgcttca tccccagctc
     1501 ggcctgctgc acatcaaacg ccctgtccgc attcctctgc gccatctcgc ggttcaacgc
     1561 accctcgttc gccttaaccg ccgcatcaaa ccgccccttc tgcaacaccg cctcacggtt
     1621 cgccgcattc tccgccgcag ccgccgccag cctttccctg cccaattccc tgaccgccgc
     1681 atttttatta tgttccgcca caatcccgcg cgccgcatta agctgcgccg ccgtcaactg
     1741 accgttcaaa gcccccgcat aaggcgtagt cgccctcctg taaagctccc gctcctcagg
     1801 cgacagcgca tccggcccgg cagacaccaa aggacgctgc gcgtcaaaat cacgcaccgg
     1861 tttgccgtcc cgatacacat tcccgtcaaa tcccaaaggc ggcggcgtcc gtccgcccgc
     1921 atccgtcggg cgcgtatcgc gccgcgcgaa atccgccccg gcccgcgcat cgggggaaag
     1981 cgccttatcg ccgcccgaaa accccaaacc ggcatccgca ccccgttcga aagcacccgc
     2041 ccggcgcaac cgccgcgccc catcctcaat attgttacgg ctcaaatcca tcacattccg
     2101 ataacgcgcc ggcccggcct cataattcgc aacggtacgc cgcaccgcat cggcacggtg
     2161 cgcctgtgcc gccgcccgct cccgctcctc cgcccccttc cgggccttct cttttttctc
     2221 cttttccttc atctcccaaa aatccccggc agacggctca aacaaaccca tcgcaaaccc
     2281 tccgaacaaa taaagcccaa aataagcaaa aacccaaacc caatcaaacg cctaaagtta
     2341 agaacaaaca aaaatcgcaa ccacaaacca attaataaac aacaagttac acaaaaaaac
     2401 acaccgacgg gccatttccg ggggcaaata aaaaccgcct tcgtgcaagg cggttgcaaa
     2461 aaagcctttc atttaacgaa aggctttttg ccgcccgcgt accgcgttca gaggttgtcc
     2521 gacaccgtcg gcgtttccat gcctgtttgg gcgtgattcg cactctttgg cggcacggcc
     2581 gtcatcgggc cggtatccgc gccgtaggct tcagggatgc cttcgggcgg tatttgcgtt
     2641 tcaggcggca tggcggggac ggggaagccg ggatcgtcgc cccgcgccgg cctgacatat
     2701 cccgcgccct gcatgaccgc gtcggcaacg ggggcgattt gcggcatggc ggctatctgc
     2761 ccgcccgcct gcatggccgc ataagccgcc tgcacgccga tttgtaccgc ccgcgcttcg
     2821 atttccttga tttcgctcgc ggtacgttgt tccttgagcg ccaattcccg ccgtttgatg
     2881 tcgttgccgg attttgccaa tgcgtcctgc accgcctgcg cgatacgcgc ctcgatttgt
     2941 tcgggcgttt cctgcactcg gacttctttg attttttcaa tcactttgtc tttaaacggg
     3001 atgtccatca gggacaccat aaacggcagc accgccgcct gatattcggg cggcagggat
     3061 ttgaccgcct cgctcatcgc acccagctgc tggctgcggt aggagttggt gctgggcacg
     3121 tcttccaaag ccactttcag ccgtatgttt tgcaggtcgt tggacaaata agccttgccg
     3181 gttacggggt cggtttcagg cctgttgatg acgaccgtcc gcccttgcgt gattgcgtcc
     3241 ccttctatga cgacggtttg ctcgtccgag cccaaatcct cgataatcat cgcaagcagc
     3301 aactcgccga ccaatgagcg gctctggcgg aagttgtcca taaccagccc cagcgactgg
     3361 ttggactgct cgacttggat gctttcctgc ctgccgctgg tggcgttgcc ccggttgccc
     3421 ataaatgacg gggtaatccc gctgatttgc cgtatggtcg cgcggctgtc ttgaagcatc
     3481 tgccaatgct gtgccgacaa ttcgaaatcg cggctgacgt cgaaacgcgc gcccggctgg
     3541 gcggcctcta ttttgttcag cacgatgtcc gcgtccaccc gtgcgatatt gcggcggaac
     3601 tgttcgtccg acatatcgac tatgcctttg gtgcgtaccg tgcgtattgc cgacaaaccc
     3661 catcgtaatt tgctgttggt gctgttgagg ttgtcctgcg cgtatttcat attgcggaca
     3721 tatccgtagg ggatgccggt gttgtcctcg cggaatccga aaaacgggac gtaagggaac
     3781 ttttgatgcg gatacggggt cggctcgtcg cggacgacca aatcccccac gacaaaggcg
     3841 cggcgcatac gcgggacgga agcggcaaac aataccgcgc cgtttgccgc catctcccga
     3901 tggtttgggt ttgcgccgtc aaactccacc gtgcgccctg tttttttgtc gcgcaggcag
     3961 tctgccgtta cccaccgcct gtaccatact tccgccaccg ccagttcgcg cgtggtttca
     4021 ttgaaccaaa actcttcgct gacggtgttg cgccccgaaa taccccaagc gtccgccagt
     4081 ccggtattgc cgccgccgtc aagcatttcc ccgctgatgc gccaatccga accgccgcgc
     4141 cccatcgctt tgaaatgtcc ggcatattca gggaagaatt gcgccaggcg ttcaggcagc
     4201 agccagcggc ggcgtatcag ccagcgggca tcggacaggt cgtatttgta agacttcata
     4261 tcccaatgga tggcgttgcg gtggatgacg ccgcactcat aaggaaactc gaaagggttg
     4321 gggttgcgtg taacctccac ccagccgatg ccgcaggcta tctgccccct gaacgcgtcc
     4381 gaacaagcct tgtcggcacg gctttgccgt tccgcgcggt tgagtttgaa gttcaatgcg
     4441 tccgccacgt cccgcccgcc ggtttcgccg tccgccgtca cgcgccagtc cgtccgtatc
     4501 gtcgcctcat atccctgtac cgacagcagg gtcggggtaa tgaggttttc aacggcgggc
     4561 ggcaggccca actcgcgctg tttctgtaaa agctcgttgt caagctgcct gccgtcggcg
     4621 tagtccattt ccttgtcggc aacggcacgc catgcaggtt ggttcatcat ttcaccgaca
     4681 aacagccggt attccccgat agtcagcggt tcgccgtttt tatcgggcaa tacgcctgtt
     4741 tccggtacgt ccgtccccat caataaagcc tccaatccga tacgggcgtt tccgtgtatc
     4801 ccgtattgct gcctgtatcc attaaatcaa ccgcctgcgc caggtagcgg aacatatccg
     4861 cgccgtgcga atattcgtcg tgcagcggcc ccattgccac gcctgttttc gcatgtattt
     4921 ggcggccgta ccgtttcagg cattccaaaa gccgcgctgt tttgtcttta tcgaagtaca
     4981 ctttgggaaa cagcatccgc gccgccctga tgccttcttc gataccggcg gcgttttgca
     5041 cgaaaaccga cttgcgcccc agtccggtca aaatctccat cgtacttttg cctgtttgga
     5101 agttgcgcgt cctgccgtcg tgcggcagga agtccgtccc ccaccggtag ggcagctttt
     5161 ccaattcggc aacataccag tccaacgtcc ggtgcgtgtc ttcgatgtag cctatgatgc
     5221 gcacgctcgt caaatcgcgc tgcaccagcc cgatggtcat ggcatcgttc cagcccaaat
     5281 cccaaaccgt atgcacgggc aaagaagaat cataagggac gagcgtaacg cgtccggaat
     5341 gaaaagcgtc ctgtatttca tgccggtaaa ccgccccctc cgataccatg cgcggcctgc
     5401 cttcccaaat attcccgtag tcctctttat tcatcgaacg ctgtgctttg agccgctccc
     5461 ggttcaatgc ttcgggaaac cacggattgt cgcgccagtt gatttcgcaa agccaagtgt
     5521 cttcggacgg catagcgata aaacgccggt aggtttcgtc cgtctccata tcgggattga
     5581 gggtaatcca aatttccgaa ccttctttgc gtatggtcgg cgtgagcacg tcccagcttt
     5641 ttttactgac gccgtgccct tcctcaaccc atacgatgtc gataccttca aacgatttga
     5701 tgctgtccac ggtatgcgac tgcaggcccg aaaatacaaa cagcgtgccg tttgcgcctc
     5761 gtatctcgaa gtcggttatt tcgtagaaat gccccaaacc caactgcgcc actttgtctt
     5821 tcaacaggcg gtgtacggaa tcgcgcatcg atttttgaat ttcgcgcgcg cataaaatac
     5881 gcaaagggcg ttgcgccccc agcgccagca gtgcggatgc cgcgccgtgc gatttgccgc
     5941 cgccgcgccc gccgtacata accttgtacc ggcaaggctt gaacagcccg tccagttttg
     6001 cgggcaattt caaatcaacc gtctttcccg tcatcttcag gccctacaaa ttcgatacgg
     6061 atgcccgccg tcttggcgga ttccgaaatc ttcgattcgg cggtatccat accgtatgat
     6121 ttacgctcga tttccaccaa aaccttaaac cccgccgcca ccgtttggaa catacgcgcc
     6181 tttgtgaatg tgtcctccgg gcttccgtac aattccgcga caatctgctc cgcgcttttg
     6241 gacaggtttt ccgccaaatt ccgatgcctg cgctgtacgg cggcaacccg tttcgcttcc
     6301 gcgtccgtta cttatttaag gttgaaatcc gcataatccg gcgcattgcc gtttttgtcc
     6361 gcggacagca ccatcgcccg cgcctttgcc tgtacctcgt cattcaaatc gcgcgtccac
     6421 acgcgttctt tggcaaccct gccgacgtgt tgcgccgaaa cattgtattt gcgcccgatt
     6481 tcggcaatgc tcaaaacccc gcgccggtaa tccagctcga ctttgcgcca atcctcatct
     6541 gacaatctcg gcattaaaaa tccaacctcc cgtttttggc ggaacattcc agataattcc
     6601 gcaacactga aaactcgcgc cccatctgaa tactggaaaa ctgctgtccg aaccccgaca
     6661 tcaaagcccc caacgagcgc atttcctgcg ggttgaggtg caataccgta tcgcctattt
     6721 ccaatacgcc catccccgaa tccaataccg atacgctgac ggggcgcgtc tcgccaaacc
     6781 ctatggcggg cttgaaaatc ccccttgtca cgcggtagat tttgccgtgc tcgaccagca
     6841 gcttggtaaa tttagtgatt tccgacattt tcaggccggt cgtttccgcc aaagcctcgc
     6901 ggctgaccac ctgctccgcg ttgtgcaaat ccacaacccc ctggtacacc ttgtcaatat
     6961 ccgacaatcc cgacatcaaa tcaaactcct aaacatccca aacgattcca aactctaccg
     7021 ccgcccgcga ttgcaggcgg ttacactaca aagccaaaat ctttagatgc tgcctctctc
     7081 gctttcactg catcttcaat atgttcaaat aaacctaata ttttattttt tctattaacc
     7141 ataatcctag cttgccattt cttagacggc ttatggaaat aaaccccagt atgcccgcta
     7201 gtattatttt taaacttccc tctatttttc atattttcag catgtgtaac atctctcaaa
     7261 ttagatattc tattatctgt cttatcccta ttgatatggt ctattgaaga agcgtgtttc
     7321 ccataaacaa aaa
//
LOCUS       DAXFZM010000092         7080 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.092, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000092 DAXFZM010000000
VERSION     DAXFZM010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7080)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7080)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7080
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.092"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(1019..1702)
                     /locus_tag="ACFJAG_001828"
     CDS             complement(1019..1702)
                     /locus_tag="ACFJAG_001828"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase"
                     /protein_id="HFC3981058.1"
                     /translation="MELVFIRHGQSEWNAKNLFTGWRDVKLSEQGLAEAAAAGKKLKE
                     NGYEFDIAFTSVLTRAIKTCNIVLEESDQLFVPQIKTWRLNERHYGRLQGLDKKQTAE
                     KYGDEQVRIWRRSYDTLPPLLDKDDAFSAHKDRRYAHLPADVVPDGENLKVTLERVLP
                     FWEDQIAPAILSGKRVLVAAHGNSLRALAKHIEGISDEDIMGLEIPTGQPLVYKLDDN
                     LKVIEKFYL"
     gene            1851..4154
                     /gene="parC"
                     /locus_tag="ACFJAG_001829"
     CDS             1851..4154
                     /gene="parC"
                     /locus_tag="ACFJAG_001829"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009340 - DNA topoisomerase IV complex
                     [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
                     /protein_id="HFC3981059.1"
                     /translation="MNTQPHASHTDSNTLMLGRYAERAYLEYAMSVVKGRALPEVSDG
                     QKPVQRRILFAMRDMGLTAGAKPVKSARVVGEILGKYHPHGDNSAYEAMVRMAQDFTL
                     RYPLIDGIGNFGSRDGDGAAAMRYTEARLTPIAELLLSEINQGTVDFMPNYDGAFDEP
                     LHLPARLPMVLLNGASGIAVGMATEIPSHNLNEVTQAAIALLKKPTLETADLMQYIPA
                     PDFAGGGQIITPADELRRIYETGKGSVRVRARYEIEKLARGQWRVIVTELPPNANSAK
                     ILAEIEEQTNPKPKAGKKQLNQDRLNTKKLMLDLIDRVRDESDGEHPVRLVFEPKSSR
                     IDTDTFINTLMAQTSLEGNVSMNLVMMGLDNRPAQKNLKTILQEWLDFRVVTVTRRLK
                     FRLNQVEKRLHILEGRLKVFLHIDEVIKVIRESDDPKADLMAAFGLTEIQAEDILEIR
                     LRQLARLEGFKLEKELNELREEQGRLNIFLGDENEKRKLIIKEMQADMKQFGDARRTL
                     VEEAGRAVLTQTAADEPITLILSEKGWIRSRAGHNLDLSQTAFKEGDRLKQTLEGRTV
                     LPVVILDSSGRTYSIDAAEIPGGRGDGVPVSSLIELQNGAKPVAMLTGLPEQHYLLSS
                     SGGYGFIAKLGDMVGRVKAGKVVMTADSGETVLPPVAVYASSFINPDCKIIAATSQNR
                     ALAFPIGELKIMAKGKGLQIIGLNAGESMTHTAVSSEPEILIESEGRRGAAHKDRLPV
                     ALIEAKRGKKGRLLPISGSLKQLSSPK"
     gene            4174..5892
                     /locus_tag="ACFJAG_001830"
     CDS             4174..5892
                     /locus_tag="ACFJAG_001830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent Fis family transcriptional
                     regulator"
                     /protein_id="HFC3981060.1"
                     /translation="MVISNPRELEKLKDRIPNLINIIRVAIVFPLMIMHILGLETGSR
                     ANLHASWTAWAFYLWLAIACWMIFFSTLNPQWQWQALRIPSFSAVADITMIGVLTYLF
                     GGIDSGFGILILPFVGSSCLLSYGRYPLLYASYASILLIFNALADSNINMYPLILDAK
                     TVTNTFVVVAGSYFVAMIASLSVRYIDRAGKLAHENHVAYRRIRGLNQIVLNRVQEAV
                     VVINVEHQTILFNKKAKDLLPMLEIGQHTSLFDPVAILWDKTSSHTFEHHIDTPELTA
                     RIRAVPMNKKQNKLLILYIRPQSEIQAEALSVKLAALGQLTANLAHEIRNPMSAIRHA
                     DGGTLFLDEVADLPLSMQVKLLRAIQEKAVRRIGDATEQPVDVRIVCATHKNLEALVE
                     SGAFRQDLYYRLNVVSLNMPSLREMRENLKLPTPYLLYKHSHNNRPYTLSPAAQQMLL
                     NYSYPGNFRELENILERAVALCVGYTVQIDDLQIQDVHHKPVRTETAVPVADTLPSET
                     AAAPSRLLPFDPDTMQIQDYLDKIERDIIGQVLKQTEGNRTQAAKRLGISFRSMRYRM
                     ERLNID"
     gene            5992..6744
                     /locus_tag="ACFJAG_001831"
     CDS             5992..6744
                     /locus_tag="ACFJAG_001831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HFC3981061.1"
                     /translation="MTDILIDDTATEAVRTLIRAFPLVPVSQPPEQGSYLLAEHDTVS
                     LRLVGEKSNVIVDFTSGAAQYRRTKGGGELIAKAVNHTAHPTVWDATAGLGRDSFVLA
                     SLGLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQG
                     KPDIVYLDPMYPERRKSAAVKKEMAYFHRLVGEAQDEVVLLHTARQTAKKRVVVKRPR
                     LGEHLAGQAPAYQYTGKSTRFDVYLPYGADKG"
     gene            complement(6849..>7080)
                     /locus_tag="ACFJAG_001832"
     CDS             complement(6849..>7080)
                     /locus_tag="ACFJAG_001832"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981062.1"
                     /translation="SFPQKRESRSLGSGNLQKSSEKSEVLDSRFHGNDGISDGILPPR
                     HSRAGGNLVRSVSVIYDKFLLPFISGFPLPWE"
BASE COUNT         1708 a         2096 c         1747 g         1529 t
ORIGIN      
        1 cccggcagct aaaaatcctg cgggatcggt gtggaattta gggataatct agtacagccc
       61 ctactatttt agtagtttta ccattagaaa aaggatatga atggaattgc cttgaggtag
      121 aagtactatc cgctgctcaa tctctagcaa atatctattg caacaaggtt cgcctcatag
      181 atggtcatgt ttgggaggaa taaatgaaaa agcgtagttg gtaattttta gttgcgcagg
      241 gtgggcttca gcccaccgtt ttttcttcat tttgggttgt tgattggtgg gctaaagccc
      301 accctacgat tactaaaatc ccgtcattcc cgcgtagagc gcatcataat aaggcgggaa
      361 tccagacctt tcggtgcgaa aacttatcgg ataaaacggt ttcccctgca tcctggattc
      421 ccactttcgt gggaatgacg ggatataggt ttccctacgg acgtgttcag attcctgcct
      481 tcgcgggaat aacggcggag cagtttctgc ttttccaata aatgaccgta acttaaaatc
      541 ccgtcatccc cgcgaaagca aaaatcctgc ctgtcggatt tcggtttttt cgggaaactg
      601 atgaatcgtc attcccgcgc aggcgggaat ccagaacgcg ggacggcggc aatattcaaa
      661 ggttgtctga aaattcagag gttccagatt cccgccttcg cgggaatgac agcggagcag
      721 tttctgcttt tccgataaat gaccgcaacc taaaacccat ccttcacacg aaaacagaaa
      781 aacaaaaacc taaaatcccg tcattcccgc gataacagtt gcgtaattgc gtagggtggg
      841 cttcagccca ccgtttcttc atttttgctt gtcaattagt ggactgaagc ccaccctgcg
      901 gttactgttt cttctttttc gattattaat tggcaggctg aagccctccc tacgtttacc
      961 gtcaaaaatg ccgtctgaaa tgctcaagcc ctcagacggc attttttatt tcgcaccctt
     1021 acaggtaaaa tttctcgatg actttcaggt tgtcgtctaa tttgtacacc agcggctggc
     1081 cggtcgggat ttccaagccc atgatgtctt cgtcggaaat gccctcgatg tgttttgcca
     1141 gcgcgcgcag ggagttgccg tgcgccgcta ccaagacgcg tttgccgctc aaaatcgcgg
     1201 gggcgatttg gtcttcccaa aacggtaata cgcgctccag cgttactttc aggttttcgc
     1261 cgtcgggtac gacatcggca ggcagatggg catagcgacg gtctttgtgt gcggaaaacg
     1321 cgtcgtcttt gtccaaaagc ggcggcaggg tgtcgtagct gcgccgccag atgcggactt
     1381 gctcgtcgcc gtatttttcg gcggtttgtt ttttgtccaa accttgcagt cggccgtagt
     1441 ggcgttcgtt cagcctccat gttttgattt gcggtacgaa cagttggtcg gattcttcca
     1501 aaacgatgtt gcaggtctta atcgcgcggg tcaggacgga tgtgaaggcg atgtcgaact
     1561 catagccgtt ttctttcagt tttttaccgg cggcggcggc ctcggcaagc ccctgctcgc
     1621 tcagcttcac gtcgcgccag cctgtaaaca ggtttttcgc gttccattcg ctttgtccgt
     1681 ggcggataaa taccaattcc atatcgtctc caatgtgtga aagtgggaaa gctttattta
     1741 taacatattt tcacatttcc cgtatttgat tcagattcag gcacggcgcc cactatggtt
     1801 tgccattttg atttacaata atgtcctttg ctttacattc cgcatacaca atgaatacgc
     1861 aaccgcacgc ttcccatacc gattccaaca cgctgatgct cggccgatac gccgaacgcg
     1921 cctatctcga atacgccatg agcgtggtca aaggccgcgc gctgcctgaa gtttcagacg
     1981 gccaaaagcc cgtgcagcgg cgcattttgt ttgccatgcg cgatatgggt ttgacggcgg
     2041 gggcgaagcc ggtgaaatcg gcgcgcgtgg tcggcgagat tttgggtaaa taccatccgc
     2101 acggcgacaa ttccgcctat gaggcgatgg tgcgcatggc tcaggatttt accttgcgct
     2161 atcccttaat cgacggcatc ggcaacttcg gttcgcgcga cggcgacggg gcggcggcga
     2221 tgcgttacac cgaagcgcgg ctgacgccga ttgcggaatt gctattgtcc gaaatcaatc
     2281 aggggacggt ggattttatg ccgaactacg acggcgcgtt tgacgagccg ctgcaccttc
     2341 ccgcccgctt gcctatggtg ttgctcaacg gcgcgtcggg catcgcggtg ggtatggcga
     2401 ccgagattcc gtcgcacaat ttgaacgaag tcacgcaggc ggcgattgca ctgttgaaga
     2461 aaccgacgct ggaaaccgcc gacctgatgc aatatattcc tgctcccgat tttgccggcg
     2521 gcggtcaaat catcacgccg gcggacgaat tgcgccgtat ttacgaaacc ggcaagggca
     2581 gcgtgcgcgt gcgtgcgcgt tatgaaatcg agaaattggc gcgcggacag tggcgcgtca
     2641 tcgtaaccga actgccgccg aacgccaatt ccgccaaaat ccttgccgaa atcgaagagc
     2701 aaaccaaccc gaaaccgaaa gcgggcaaga agcagctcaa ccaagaccgg cttaatacca
     2761 aaaagctgat gctggattta atcgaccgcg tgcgcgacga gtccgacggc gaacatcccg
     2821 tgcgccttgt atttgaaccg aaatccagcc gcatcgatac cgataccttc atcaacacgc
     2881 tgatggcgca aacttcgctg gaaggcaatg tgtccatgaa cttggtgatg atgggtttgg
     2941 acaaccgccc cgcgcagaaa aacctgaaaa cgattttgca ggaatggctg gatttccgcg
     3001 tcgttaccgt aacacgccgt ctgaaattcc gtttaaacca agtggaaaaa cggctgcaca
     3061 tcctcgaagg ccgtctgaaa gtctttctgc acatcgacga agtgattaaa gtcatccgcg
     3121 aatcggacga cccgaaagcc gatttgatgg cggcattcgg gctgaccgaa atccaggccg
     3181 aagacatttt ggaaatccgc ctgcgtcagc tggcgcgttt ggaaggtttc aaactcgaaa
     3241 aagaattgaa cgaattgcgc gaagaacaag gccgtctgaa tatctttttg ggcgacgaaa
     3301 acgaaaaacg caagctgatt atcaaagaga tgcaggcgga catgaagcag ttcggcgacg
     3361 cgcgccgcac gctggtggaa gaggccggac gcgccgtgct gacacaaacc gccgccgacg
     3421 aacccatcac gctgattttg tcggaaaaag gctggatacg cagccgtgcc ggacataatc
     3481 tcgatttgag ccaaaccgcg ttcaaagaag gcgaccgcct caaacaaacc cttgaaggcc
     3541 gcactgtttt acccgtcgtc atcctcgatt catcgggcag aacctactcg atcgatgccg
     3601 ccgaaatccc cggcggacgc ggcgacggcg taccggtttc ctccttaatc gagttgcaaa
     3661 acggcgcgaa acccgtcgcg atgttgacag gattgccgga acaacattat ttattatcaa
     3721 gcagcggcgg ctacggcttt atcgccaagc tgggcgatat ggtcggacgc gtgaaagcgg
     3781 gcaaagtggt gatgaccgca gacagcggcg aaaccgtcct gccgccggtt gccgtctatg
     3841 cctcctcgtt catcaacccc gactgcaaaa tcattgcagc caccagtcaa aaccgcgccc
     3901 tcgccttccc catcggcgaa ttgaaaatta tggcgaaagg caaaggactg caaatcatcg
     3961 gattaaacgc cggcgaatcg atgacgcata ccgccgtttc ttccgagccg gaaatcctga
     4021 ttgaaagcga aggcaggcgc ggcgcggcgc acaaagaccg cctccccgtc gccctgattg
     4081 aggcaaaacg cggcaaaaaa ggcagactgt tgcccatatc gggcagcctg aaacagcttt
     4141 cttcccccaa ataaacccgg ttccgcacat attatggtga tttccaaccc ccgcgaactt
     4201 gaaaaactca aagaccggat tcccaatctg atcaacatca tccgcgtcgc catcgttttc
     4261 ccgctgatga ttatgcacat cctcgggctg gaaaccggca gccgtgcgaa cctgcacgcc
     4321 tcatggacgg cgtgggcgtt ttacttgtgg cttgccattg cctgctggat gattttcttt
     4381 tccaccctca acccgcaatg gcaatggcag gctttgagaa taccgagttt cagcgccgtg
     4441 gccgacatca cgatgatcgg cgtgctgacc tacctgttcg gcggcatcga ttcggggttc
     4501 ggcatcctga tcctgccctt cgtgggcagc tcctgcctac tcagttacgg gcgttatccc
     4561 ctgctctatg ccagctatgc atccatcctg ctgatattca acgcccttgc agacagcaat
     4621 atcaatatgt atccgctgat tctggatgca aaaaccgtca ccaatacctt cgtcgtcgta
     4681 gccggctcct atttcgtcgc tatgattgcc tcgctgtcgg tcagatacat cgaccgtgcc
     4741 ggcaaacttg cccatgaaaa ccacgtcgcc taccgccgta tcaggggctt gaaccaaatc
     4801 gtgctcaacc gcgttcagga agcggtcgtc gtcatcaacg tcgagcatca gaccatactg
     4861 ttcaataaaa aggcaaaaga tctgctcccc atgcttgaaa tcggacagca tacctccctg
     4921 ttcgaccctg tcgccatctt atgggataaa acatcctcac acaccttcga acaccatatc
     4981 gacacgcccg aactgaccgc ccgcatccgc gccgtgccga tgaacaaaaa gcagaacaag
     5041 ctgctcatcc tctatatccg cccgcaaagc gaaattcagg cggaagccct gtccgtcaaa
     5101 cttgccgcgc tcggacaact gaccgccaac cttgcccacg aaatccgcaa cccgatgtcc
     5161 gccatccgcc acgccgacgg cggcacttta tttttggacg aagtggccga cctgcccctt
     5221 tccatgcagg tcaaactctt gcgcgcgatt caagaaaaag ccgtgcgccg tatcggcgac
     5281 gcgaccgagc agcccgtcga tgtccgcatc gtctgcgcca cccacaaaaa cctcgaagcc
     5341 cttgtcgaaa gcggcgcatt ccgccaagac ctgtattacc gtctcaatgt cgtcagcctc
     5401 aatatgccgt ccctgcgtga aatgcgcgaa aatttgaagc tgcccacccc ctacctcctg
     5461 tacaaacaca gccacaacaa ccggccctac acactctccc ccgccgcgca acagatgctc
     5521 ctgaattaca gttatccggg caatttccgc gaactcgaaa acatcctcga acgcgccgtc
     5581 gccctgtgcg tcggatatac agtgcaaatc gacgacctgc aaatccaaga tgtgcaccac
     5641 aaacccgtcc ggacggaaac cgccgtcccc gttgccgata ccttgccgtc tgaaacagcc
     5701 gccgcaccgt cccgccttct cccgttcgac cccgatacca tgcagataca ggactatctc
     5761 gacaaaatcg aacgcgacat catcggacaa gtcctcaaac aaaccgaagg caaccgcacg
     5821 caagccgcca aacgcttggg catcagcttc cgctctatgc gctaccgtat ggaacgcctc
     5881 aacatagact gacaaacggc atccgcacca tctccgccca cccgaaaaaa tgccgtctga
     5941 aacggcacgg ggaagcgggt tcgccccacg accgaacgga cacaatacac catgaccgac
     6001 atcctcattg acgataccgc caccgaagcc gtccgcaccc tgatacgggc attccccctc
     6061 gtgcccgttt cccaaccgcc cgaacaaggc agttacctcc ttgctgaaca cgataccgtc
     6121 agcctcaggc ttgtcgggga aaaaagcaac gtcatcgtcg attttacctc cggcgcggca
     6181 caataccggc gcacaaaagg cggaggagaa ctcatcgcca aagccgtcaa ccacaccgcg
     6241 caccccaccg tatgggatgc aaccgcagga ttggggcgcg acagcttcgt cctcgcctcg
     6301 ctcggactga ccgttaccgc cttcgagcaa catcccgccg tcgcctgcct gctttcagac
     6361 ggcatccgcc gcgccctcct caatcccgaa acgcaagaca ccgccgcgcg catcaacctc
     6421 catttcggca atgccgccga acaaatgcct gcccttgtta aaacacaagg caaacccgac
     6481 atcgtttatc tcgacccgat gtatcccgaa cgccgcaaaa gtgccgccgt caaaaaagaa
     6541 atggcttatt tccaccggct tgtcggcgaa gcgcaagatg aggtcgtcct ccttcatacc
     6601 gcacgccaaa cggcaaaaaa acgcgtcgtc gtcaaacgcc cgcgcctcgg cgaacacctt
     6661 gccggacaag cccccgccta ccaatacacc ggcaaaagca cccgcttcga cgtttacctg
     6721 ccctacggag cggacaaggg ataacgccca taaaacaaga caccgaaaaa tttgccgttc
     6781 ttatgcaaac gagaaaccgg tttttgcgtt tcgactgttt tggataagtc atcacacctt
     6841 aaagtttgtc attcccacgg aagtgggaat ccggaaatga aaggcaacag gaatttatcg
     6901 taaatgactg aaaccgaacg gactagattc ccgcctgcgc gggaatgacg gggcgggagg
     6961 atgccgtctg aaattccgtc attcccgtga aaacgggaat ctagaacttc tgatttttca
     7021 gacgactttt gaagattgcc gctacccaat gatctggatt cccgcttttg cgggaatgac
//
LOCUS       DAXFZM010000093         7059 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.093, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000093 DAXFZM010000000
VERSION     DAXFZM010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7059)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7059)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7059
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.093"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            89..2254
                     /gene="fetA"
                     /locus_tag="ACFJAG_001833"
                     /gene_synonym="frpB"
     CDS             89..2254
                     /gene="fetA"
                     /locus_tag="ACFJAG_001833"
                     /gene_synonym="frpB"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_021438799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor FetA/FrpB"
                     /protein_id="HFC3981063.1"
                     /translation="MNAPFFRLSLLSLTLAAGFAHAAENNANVALDTVTVKGDRQGSK
                     IRTNIVTLQQKDESTATDMRELLKEEPSIDFGGGNGTSQFLTLRGMGQNSVDIKVDNA
                     YSDSQILYHQGRFIVDPALVKVVSVQKGAGSASAGIGATNGAIIAKTVDAQDLLKGLD
                     KNWGVRLNSGFAGNNGVSYGASVFGKEGNFDGLFSYNRNDEKDYEAGKGFRNDNGGKT
                     VPYSALDKRSYLAKIGTTFGDGDHRIVLSHMKDQHRGIRTVREEFAVSEKNSRITIKR
                     QAPSYRETTQSNTNLAYTGKDLGFVEKLDANAYVLEKKRYSADDKDNGYAGNVKGPNH
                     TRITTRGMNFNFDSRLAEQTLLKYGINYRHQEIKPQAFLNGEFKISDKEKGPNGTEVD
                     VDVAQKAKNRANEKIVYAYKLSNPTKTDTGAYIEAIHEIDGFTLTGGLRYDRFKVKTH
                     DGKTVSSSSLNPSFGVIWQPREHWNFSASHNYAGRSPRLYDALQTHGKRGIISIADGT
                     KAERARNTEIGFNYNDGTFAANGSYFRQTIKDALANPQNRHDSVAVREAVNTGYIKNH
                     GYELGASYRTGGLTAKVGVSRSKPRFYDTHPKKLLSANPEFGAQTGRTWTASLAYRFK
                     NPNLEIGWRGRYVQKATGSILAAGQKDRDGKLENVVRQGFGVNDVFANWKPLGKDTLN
                     VNLSVNNVFDKFYYPHSQRWTNTLPGVGRDVRLGVNYKF"
     gene            2406..3371
                     /locus_tag="ACFJAG_001834"
     CDS             2406..3371
                     /locus_tag="ACFJAG_001834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore ABC transporter substrate-binding
                     protein"
                     /protein_id="HFC3981064.1"
                     /translation="MLRLTALTLCTALALGACSPQNSDPAPQAKEQAVSAAQSESASV
                     TVKTARGDVQIPQNPERIAVYDLGMLDTLSKLGVKTGLSVDKNRLPYLEEYFKTTKPA
                     GTLFEPDYETLNAYKPQLIIIGSRAAKAFDKLNEIAPTIEMTADTANLKESAKERIDA
                     LAQIFGKQAEADKLKAEIDASFEAAKTAAQGKGKGLVVLVNGGKMSAFGPSSRLGGWL
                     HKDIGVPAVDESIKEGSHGQPISFEYLKEKNPDWLFVLDRSAAIGEEGQAAKDVLNNP
                     LVAETTAWKKGQVVYLVPETYLAAGGAQELLNASKQVADAFNAAK"
     gene            3389..3580
                     /locus_tag="ACFJAG_001835"
     CDS             3389..3580
                     /locus_tag="ACFJAG_001835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981065.1"
                     /translation="MPSETRMQTASCVSDGIARYGRYRGNGGKRFDWNLPHPLPVRRF
                     QTRLSAPTVRTALFESPTP"
     gene            3599..4567
                     /locus_tag="ACFJAG_001836"
     CDS             3599..4567
                     /locus_tag="ACFJAG_001836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HFC3981066.1"
                     /translation="MTAKPFSLNLANLLLPAVLFAVSLSVGIADFRWSDVFSLSDSQQ
                     VMFISRLPRTFAIVLTGASMAVAGMIMQILMRNRFVEPSMAGAGQSAALGLLLMSLLL
                     PAAPLPVKMSVAAVAALIGMLVFMLLIRRLPPTAQLMVPLVGIIFGGVVEAVATFVAY
                     EFEMLQMLGVWQQGDFSSVLLGRYELLWITGGLAVFAYLIADRLTILGLGETVSVNLG
                     LNRTAVLWSGLIIVALITSLVIVTVGNIPFIGLVVPNIVSRLMGDRLRQSLPAVALLG
                     ASLVLLCDIIGRVIVFPFEIPVSTVFGVLGTALFLWLLLRKPAHAV"
     gene            4557..5531
                     /locus_tag="ACFJAG_001837"
     CDS             4557..5531
                     /locus_tag="ACFJAG_001837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HFC3981067.1"
                     /translation="MPSEKNIGFMAGSSRPLRVAFALLLVSCILFMTLNVKGDWDFVL
                     HLRLTKLAALLMVAYAVGVSTQLFQTLTNNPILTPSILGFDSLYVFLQTLLVFTFGGV
                     GYTSLPLTGKFDFELVIMMGGSLLLFYTLIRQGGRDLPRMILIGVIFGILFRSLSSLL
                     SRMIDPEEFTAAQANMFAGFNTVRSELLGIGALVLLVSAAVVWHERYRSDVHLLRRDQ
                     AVNLGISYTRNTLWILLWIAALVATATAVVGPVSFFGLLAASLANHFSPSVRHSVRLP
                     MTVCVGGILLVGGQTVFEHFLGMKAVLSVVVEFAGGLVFLYLVLKHKK"
     gene            5576..6202
                     /locus_tag="ACFJAG_001838"
     CDS             5576..6202
                     /locus_tag="ACFJAG_001838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FmdE family protein"
                     /protein_id="HFC3981068.1"
                     /translation="MTQERLPEFFDRAPTLTVQDPLAAFLGAAENGILTYRYADAVRL
                     CGHSCPTVAGAYLMVIKGLKALYGEELPERGGIEAAMQGTRDEGTVGVTASVVQLLTG
                     AAPETGFGGIGMQGRFARRNLLSFGAGEINGTLTLRRKDSGKTVAVSLNAALQPFAPQ
                     MRDIMPKAVGGSASAKELERFGQLWQARVKAFLTESADDPQFVIVREL"
     gene            6286..7044
                     /locus_tag="ACFJAG_001839"
     CDS             6286..7044
                     /locus_tag="ACFJAG_001839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HFC3981069.1"
                     /translation="MITIRNVSYRIGTHPILDNVSLDIPEGGITALIGPNGAGKSTLF
                     SFMARLRPLESGSIAYRGKNLAGTPTAELARTLSILTQENSIMSRITVRDLLMFGRYP
                     YHQGRPTAECRRIVNGAIEEFHLQDLSDRYLTELSGGQRQRAMIAMVFCQSTDYVLLD
                     EPLNNLDMYHARSLMQILQKLTHEHKRTTVAVLHDINQAAAYADHVVAMKNGKAALTG
                     TPEEVFTVHNIKELFDMDVDVLDYEGKKLIVHHI"
BASE COUNT         1629 a         2127 c         1829 g         1474 t
ORIGIN      
        1 caaaaataat tattattatt ttttcttatc ctgccaaacc ttaacggttt ggcttaactt
       61 cccttcatac actcaaaagg acgaacaaat gaacgccccg tttttccgcc tcagcctgct
      121 ctcgctcaca cttgccgccg gctttgccca cgcggcagaa aataatgcca atgtcgcatt
      181 ggataccgtt accgtaaaag gcgaccgcca aggcagcaaa atccgtacca acatcgttac
      241 gcttcaacaa aaagacgaaa gcaccgcaac cgatatgcgc gaactcttaa aagaagagcc
      301 ctccatcgat ttcggcggcg gcaacggcac gtcccaattc ctgacgctgc gcggtatggg
      361 tcagaactct gtcgacatca aggtggacaa cgcctattcc gacagccaaa tcctttacca
      421 ccaaggcaga tttattgtcg atcccgcttt ggttaaagtc gtttccgtac agaaaggcgc
      481 gggttccgcc tctgccggta tcggcgcgac caacggcgcg atcatcgcca aaaccgtcga
      541 tgcccaagac ctgctcaaag gcttggataa aaactggggc gtgcgcctca acagcggctt
      601 tgccggcaac aacggcgtaa gctacggcgc aagcgtattc ggaaaagagg gcaacttcga
      661 cggtttgttc tcttacaacc gcaacgatga aaaagattac gaagccggca aaggtttccg
      721 caatgacaac ggcggcaaaa ccgtaccgta cagcgcgctg gacaaacgca gctacctcgc
      781 caaaatcgga acaaccttcg gcgacggcga ccaccgcatc gtattgagcc acatgaaaga
      841 ccaacaccgg ggcatccgca ctgtgcgtga agagtttgcc gtcagcgaaa aaaattcacg
      901 gataactatt aaacgccaag ccccatccta ccgcgaaacc actcaatcca acaccaactt
      961 ggcgtacacc ggcaaagatt tgggctttgt cgaaaaactg gatgccaacg cctatgtgtt
     1021 ggaaaagaaa cgctattccg ccgatgacaa agataacggc tacgcaggca atgtaaaagg
     1081 ccccaaccat acccgaatta ccactcgggg tatgaacttc aacttcgaca gccgccttgc
     1141 cgaacaaacc ctgttgaaat acggcatcaa ctaccgccat caggaaatca aaccgcaagc
     1201 gtttttgaac ggcgaattta agatctccga taaggaaaaa ggacccaacg gaacagaagt
     1261 cgacgtagat gtagcacaaa aagcaaaaaa ccgtgcaaat gaaaaaattg tttacgccta
     1321 caaactttcc aacccgacca aaaccgatac cggcgcgtat atcgaagcca ttcacgagat
     1381 tgacggcttt accctgaccg gcgggctgcg ttacgaccgc ttcaaggtaa aaacccacga
     1441 cggcaaaacc gtttcaagca gcagcctcaa cccgagtttc ggcgtgattt ggcagccgcg
     1501 cgaacactgg aacttcagcg cgagccacaa ctacgccggc cgcagcccgc gcctgtatga
     1561 cgcgctgcaa acccacggca agcgcggcat catctcgatt gccgacggca ccaaagccga
     1621 acgcgcgcgc aataccgaaa tcggcttcaa ctacaacgac ggcacgtttg ccgcaaacgg
     1681 cagctacttc cggcagacca tcaaagacgc gcttgccaat ccgcaaaacc gccacgactc
     1741 cgtcgccgtc cgcgaagccg tcaacaccgg ctacatcaaa aaccacggtt acgaattggg
     1801 cgcgtcctac cgcaccggcg gcctgaccgc caaagtcggc gtaagccgca gcaaaccgcg
     1861 cttttacgat acccatccta aaaaactgtt gagcgcgaac cccgagtttg gcgcacaaac
     1921 cggccgcact tggacggcct cccttgccta ccgcttcaaa aacccgaatc tggaaatcgg
     1981 ctggcgcgga cgctatgttc aaaaagctac gggttcgata ttggcggcag ggcaaaaaga
     2041 ccgcgacggc aaattggaaa acgttgtacg ccaaggtttc ggtgtgaacg acgtcttcgc
     2101 caactggaaa ccattgggca aagacacgct caatgtcaat ctttcggtta acaacgtgtt
     2161 cgacaagttc tactatccgc acagccaacg ctggaccaat accctgccgg gcgtgggacg
     2221 tgatgtacgc ctgggcgtga actacaagtt ctaaaacgca catcccgaaa aaatgccgtc
     2281 tgaaagcctt tcagacggca tctgtcctga taatttgata tagattatca tttatccttt
     2341 ctaaagccgt tccggtttgt ccgaccggcg gctttgcccc aatatcccca ttttggagac
     2401 accctatgtt gcgtttgacc gcattgaccc tctgcaccgc cctcgccttg ggcgcgtgtt
     2461 cgccgcaaaa ttccgaccct gccccacaag ccaaagaaca ggcggtttcc gccgcacaat
     2521 ccgaaagcgc gtccgttacc gtcaaaaccg cgcgcggcga cgttcaaata ccgcaaaacc
     2581 ccgaacgcat cgccgtttac gatttgggta tgctcgacac cttgagcaaa ctgggcgtga
     2641 aaaccggttt gtccgtcgat aaaaaccgcc tgccgtattt agaggaatat ttcaaaacga
     2701 ccaaacctgc cggaactttg ttcgagccgg attacgaaac gctcaatgcc tacaagccgc
     2761 agctcatcat catcggcagc cgcgcagcca aggcgtttga caaattgaac gaaatcgcgc
     2821 cgaccatcga gatgaccgcc gataccgcca atctcaaaga aagtgccaaa gagcgtatcg
     2881 acgcgctggc gcaaatcttc ggcaaacagg cggaagccga caagctgaag gcggaaatcg
     2941 acgcgtcttt tgaagcggcg aaaaccgccg cgcaaggcaa aggcaaaggt ttggtggttt
     3001 tggtcaacgg cggcaagatg tccgccttcg gcccgtcttc acgactgggc ggctggctgc
     3061 acaaagacat cggcgttccc gctgtcgatg aatcaattaa agaaggcagc cacggccagc
     3121 ctatcagctt cgaatacttg aaagagaaaa atcccgactg gctgttcgtc ctcgaccgca
     3181 gcgcggccat cggcgaagag ggtcaggcgg cgaaagacgt gttgaacaat ccgctggttg
     3241 ccgaaacgac cgcatggaaa aaaggacagg tcgtttacct cgttcccgaa acttatttgg
     3301 cagccggcgg cgcgcaagag ctgctgaacg cgagcaaaca ggttgcggat gcttttaacg
     3361 ccgcgaaata atgaaacggc ggcattcgat gccgtctgaa acacggatgc aaaccgcttc
     3421 ctgtgtttca gacggcattg cccgatacgg gcgttatcgc gggaatggcg gcaagcgttt
     3481 tgattggaac ttgccccatc ctctgcccgt ccggaggttt caaacaaggc tttccgctcc
     3541 gacggttcgg actgccttgt ttgaatctcc tacgccgtaa cgcttttccc ttctgtttat
     3601 gactgccaaa cctttttccc tcaacctggc caacctcctg ctgccggcgg tgttgtttgc
     3661 cgtcagcctg tcggtcggca ttgccgattt ccgctggtcg gatgtgtttt cgctgtccga
     3721 cagccaacag gtcatgttca tcagccgcct gccgcgcacg tttgcgattg tgttgacggg
     3781 cgcgtcgatg gcggtggcgg ggatgattat gcagattctg atgcgcaacc gttttgtcga
     3841 gccttctatg gcgggtgcgg gccaaagtgc ggctttgggt ttgcttctga tgtccctgct
     3901 gctgcctgcc gcgccgctgc cggtcaaaat gtcggttgcc gccgttgccg cgctgatcgg
     3961 gatgttggtc tttatgctgc tgatccgccg cctgccgccg acggcgcagc tgatggtgcc
     4021 gctggtgggg attattttcg gcggcgtggt tgaggcggtg gcgacgtttg tcgcgtatga
     4081 gtttgagatg ctgcaaatgt tgggcgtgtg gcagcagggc gacttttcaa gcgtgctgct
     4141 ggggcggtac gagctgcttt ggattacggg cggtttggcg gtgtttgcct acctgattgc
     4201 cgaccggctg acgattttgg ggctgggcga gacggtcagc gtgaatttgg gtttgaaccg
     4261 gacggcggtg ttgtggtcgg gtttgattat tgtggcactg attacatcgc tggtcattgt
     4321 aacggtcggc aatattccgt ttatcgggct ggtcgtgccg aatatcgtca gccgcctgat
     4381 gggcgacagg ctgcgccaaa gcctgcctgc ggtcgccctc ttgggcgcgt ctttggtttt
     4441 attgtgcgac attatcggac gcgtgattgt gtttccgttt gaaattccgg tctctacggt
     4501 ttttggtgtg ttgggtacgg ctttgttttt gtggctttta ttaaggaaac ctgcccatgc
     4561 cgtctgaaaa aaatatcggt tttatggcag gaagcagccg tccgttgcgg gtcgcctttg
     4621 cgctgttgct ggtttcctgc atcctgttta tgacgctcaa cgtcaaaggc gattgggact
     4681 ttgtcttgca cctgcgcctg accaagcttg ccgcgctgct gatggtcgcc tatgcggtcg
     4741 gcgtgtccac tcaactcttc caaacgctga ccaacaaccc gattctgacc ccttcgattt
     4801 tgggtttcga ttcgctgtat gtgtttttgc agaccttgct ggtgtttacg ttcggcggcg
     4861 tgggctatac atccctgccg ttgacgggca aattcgactt cgaactggtc atcatgatgg
     4921 gcggctcgct gctgctgttt tacacgctca tccgtcaggg cgggcgcgat ttgccgcgca
     4981 tgattttaat cggcgtgatt ttcgggattt tgttccgcag cctttcctcg ctgctttcgc
     5041 gcatgataga ccccgaagaa tttaccgccg cgcaggcgaa tatgtttgcc ggattcaata
     5101 ccgtccgcag cgagcttttg ggcataggcg cgctggtcct gctcgtcagc gcggcggtcg
     5161 tttggcacga acgctaccgc tcggacgtac accttttgag gcgcgaccaa gccgtcaatt
     5221 tgggcatcag ctacacgcgc aacaccttat ggatactgct ttggattgcc gcattggtgg
     5281 cgacggcgac cgccgttgtc ggcccggtga gctttttcgg gcttctcgcc gcctcgcttg
     5341 ccaaccactt ttccccgtcc gtgcgccatt ccgtccgcct gccgatgacg gtttgcgtcg
     5401 gcggcatcct cttggtcggc ggacaaaccg tattcgaaca cttcttgggc atgaaggcgg
     5461 tattaagcgt ggtggtcgaa tttgcgggcg gactcgtttt cctctatctc gttttaaaac
     5521 acaaaaaatg acggatgccg tctgaacggc agcccgcccc gaaaggacaa accatatgac
     5581 gcaagaacgt ttacccgaat ttttcgaccg cgccccgacg ctgaccgtac aagacccgct
     5641 tgccgcattc ctcggcgcgg ccgaaaacgg catcctcact taccgctacg ccgatgccgt
     5701 gcgcctgtgc ggacattcct gcccgaccgt cgcgggcgcg tacctgatgg ttatcaaagg
     5761 cctgaaagca ctttacggcg aagagctgcc cgaacgcggc ggcatcgaag ccgccatgca
     5821 gggaacgcgc gacgaaggca cggtcggcgt aaccgcgtcc gtcgtccaac tccttaccgg
     5881 cgcagccccc gaaaccggct tcggaggcat cggaatgcag ggacgcttcg cccgccgcaa
     5941 cctcttatcc tttggtgcag gcgaaatcaa cggcacactg accctgcgcc gcaaagacag
     6001 cggcaaaacc gtcgccgtca gcctcaacgc cgccctgcaa ccctttgcac ctcaaatgcg
     6061 cgacatcatg cccaaagccg tcggcggcag cgcaagcgca aaagaactcg aacgcttcgg
     6121 acaactttgg caggcacgcg ttaaagcatt tttgaccgaa tcggcggacg acccgcagtt
     6181 cgtcatcgtc cgcgaactgt gaacattcag acggcattcc gaatttcaaa tgccgtccga
     6241 acccccgcca aacaacaaca aacctacgcc cgacaagcat ccgccatgat taccatccgc
     6301 aacgtcagct accgcatcgg cacacacccc atcctcgaca acgtcagcct cgacatcccc
     6361 gaaggcggca ttaccgcgct aatcggcccc aacggtgcgg gcaaatccac cctgttttcc
     6421 tttatggcgc ggctgcgccc gcttgaaagc ggcagcatcg cctaccgagg caaaaacctt
     6481 gccggcaccc ccaccgccga actcgcccgc acgctctcca tcctcaccca agaaaacagc
     6541 atcatgagcc gcatcaccgt gcgcgacctg ctgatgttcg gccgttaccc ctaccatcaa
     6601 ggcagaccga ctgccgaatg ccgccgtatc gttaacggtg caatcgaaga attccacctg
     6661 caggacctct ccgaccgcta cctgaccgaa ctctccggcg gacaacgcca acgcgccatg
     6721 attgcgatgg tgttctgcca aagcaccgac tacgtccttt tggacgaacc gctgaacaac
     6781 ctcgatatgt atcacgcccg ctcgctcatg cagattctgc aaaagctcac gcacgaacac
     6841 aaacgcacca ccgtcgccgt attgcacgac atcaaccagg ccgccgccta cgccgaccac
     6901 gtcgtcgcca tgaaaaacgg caaagccgcc ctgaccggca cacccgaaga agtgttcacc
     6961 gtacacaaca tcaaagaact gttcgacatg gacgtggacg tactcgacta cgaaggtaaa
     7021 aaactcatcg tccaccacat ctgaagctca aaaagaaag
//
LOCUS       DAXFZM010000094         7046 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.094, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000094 DAXFZM010000000
VERSION     DAXFZM010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7046)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7046)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7046
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.094"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(292..756)
                     /locus_tag="ACFJAG_001840"
     CDS             complement(292..756)
                     /locus_tag="ACFJAG_001840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /protein_id="HFC3981070.1"
                     /translation="MKELDKIDFRILKILQQNARILMTELAEKVGLSSTPVTERVCRL
                     EREHYISGYHAHLNPHLLGKPPLVFVELKLQSKSGNIFEDFKKEVLKIPQIMECHLVS
                     GEYDYLIKVRLPDMSAYRDMLGNILLQLPAASESRSYVVMEEVKENPVLDLD"
     gene            978..2036
                     /gene="alr"
                     /locus_tag="ACFJAG_001841"
     CDS             978..2036
                     /gene="alr"
                     /locus_tag="ACFJAG_001841"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008784 - alanine racemase activity
                     [Evidence IEA];
                     GO_process: GO:0006522 - alanine metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HFC3981071.1"
                     /translation="MRPLNVQIRLGNLRHNYRILKEMHGGKLLAVVKADAYGHGAVRC
                     AFALADLADGFAVATIDEGIRLRESGITHPIVLLEGVFEASEYEAVEQYSLWPAVGNQ
                     WQLEALLSRHWKKPVKVWLKMDSGMHRTGFFPHDYASAYAALKQSEYVDSIVKFSHFS
                     CADEPESGMTEIQMEAFDLGTKGLEGEESLANSAAILNIPEARRDWGRAGLALYGISP
                     FGDSDDRLKPVMRLSTRIFGERVLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRR
                     APSNSPVAVDGKLTRVIGRISMDMMTIELDASQEGLGHEVELWGDTVNINTVAEAAGT
                     IPYELMCNIKRAKFTYIE"
     gene            complement(2578..3933)
                     /locus_tag="ACFJAG_001842"
     CDS             complement(2578..3933)
                     /locus_tag="ACFJAG_001842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PFL family protein"
                     /protein_id="HFC3981072.1"
                     /translation="MSIQSGEILETVKMVADQNFDVRTITIGIDLHDCISTDIDVLNQ
                     NIYNKITTVGKDLVATAKHLSAKYGVPIVNQRISVTPIAQIAAATKADSYVSVAQTLD
                     KAAKAIGVSFIGGFSALVQKGMSPSDEVLIRSVPEAMKTTDIVCSSINIGSTRAGINM
                     DAVKLAGETIKRTAEITPEGFGCAKIVVFCNAVEDNPFMAGAFHGSGEADAVINVGVS
                     GPGVVKAALENSDAVSLTEVAEVVKKTAFKITRVGELIGREASKMLNIPFGILDLSLA
                     PTPAVGDSVARILEEMGLSVCGTHGTTAALALLNDAVKKGGMMASSAVGGLSGAFIPV
                     SEDEGMIAAAEAGVLTLDKLEAMTAVCSVGLDMIAVPGDTPAHTISGIIADEAAIGMI
                     NSKTTAVRIIPVTGKTVGDSVEFGGLLGYAPVMPAKEGSCEVFVNRGGRIPAPVQSMK
                     N"
     gene            complement(3948..4220)
                     /locus_tag="ACFJAG_001843"
     CDS             complement(3948..4220)
                     /locus_tag="ACFJAG_001843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HFC3981073.1"
                     /translation="MNNSVITVIGKDRVGIVYDVSKILAENRINILNISQQLMDDFFT
                     MIILVDTSKCPKSRQEILDLFAEESKKLALDIRMQNEEIFQAMHRI"
     gene            complement(4345..5082)
                     /locus_tag="ACFJAG_001844"
     CDS             complement(4345..5082)
                     /locus_tag="ACFJAG_001844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-antitoxin system YwqK family antitoxin"
                     /protein_id="HFC3981074.1"
                     /translation="MKKLSRIVFSIVLLGFSAALPAQTYSVYFNQNGKLTATMSSAAY
                     IRQYSVAAGIAHAQDFYYPSMKKYSEPYIVASTQIKSFVPTLQNGMLILWHFNGQKKM
                     AGGFSKGKPDGEWVNWYPNGKKSAVMPYKNGLSEGTGYRYYRNGGKESEIQFKQNKAN
                     GVWKQWYADGSIKTEMVMVNDEPAKILTWDESGRLLSELSIRHHKRNGVVLEWYEDGS
                     KKSEAVYQDDKLVRKTQWDKDGYLIEP"
     gene            complement(5220..6119)
                     /gene="prmB"
                     /locus_tag="ACFJAG_001845"
     CDS             complement(5220..6119)
                     /gene="prmB"
                     /locus_tag="ACFJAG_001845"
                     /EC_number="2.1.1.298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008276 - protein methyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA];
                     GO_process: GO:0042273 - ribosomal large subunit
                     biogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3 N(5)-glutamine
                     methyltransferase"
                     /protein_id="HFC3981075.1"
                     /translation="MFNQAAQELTTIRDVLRFAVSRFNEAGLFFGHGTDNAHDEAVYL
                     ILHTLNLPLDMLAPYLDAKLLEAEKEEVLAVIERRAVEHIPAAYLTHQAWQGEFDFYV
                     DERVIVPRSFIYELLGDGLRPWIEYDELVHNALDLCTGSGCLAIQMAHHYPDAQIDAV
                     DVSLDALEVAGINIEDYGLEERIQLIHTDLFEGLEGTYDLIVSNPPYVDAESVGALPE
                     EYLHEPELALGSGADGLDATRQILLNAAKFLNPKGVLLVEIGHNRDVLEAAYPELPFT
                     WLETSGGDGFVFLLTREQLLGEE"
     gene            complement(6218..6415)
                     /locus_tag="ACFJAG_001846"
     CDS             complement(6218..6415)
                     /locus_tag="ACFJAG_001846"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981076.1"
                     /translation="MGERLVQTDYAHPAVGIADIGHLVVFCGYPLLALNKPRFFPAYQ
                     VAHTVRHRRFRSGNGLRAAFM"
     gene            6451..6936
                     /locus_tag="ACFJAG_001847"
     CDS             6451..6936
                     /locus_tag="ACFJAG_001847"
                     /inference="COORDINATES: protein motif:HMM:NF037911.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981077.1"
                     /translation="MRGCSRCRADRQAGERQPRDGNGRWTAGEVVSVSGGELGEFAET
                     KELRKAAMQYARDNFVGKSYVNESSGHELKVTWQGVKHAASKSNSIELSLMVALDKVL
                     MNAKYEGSFPNKLGRDHIIAVHKYSTGVRFGNKVLKIRIIAREKFDGIKHYDHFILKD
                     K"
BASE COUNT         1895 a         1731 c         1606 g         1814 t
ORIGIN      
        1 tgcatttttt atctccgctt tttttgaaat ttaattactt ttattgtttg aaattctatt
       61 ctttaagaaa tttaacaaga aaaacgcttg ctttttgacc ggaaaagctg cataattcgt
      121 tccgttagct ggttcgagta gtcagttaat agtttctcct ctatttctcc tttgtagact
      181 tggcacacat tctattgaat gtgtgcattt tttatctgaa gcaacaagcc tctgtgcgtg
      241 atgttgttat gtttcattta gatgtcaaac cgcatacccg gtctgaaata ttcaatccaa
      301 atccaaaacc ggattttctt tgacttcctc catcacaaca taactcctac tctccgaagc
      361 ggcaggcagt tgcaatagga tattgccgag catatcccga taggcagaca tatcgggcaa
      421 acgtacttta atcaggtagt cgtattcgcc cgacaccaga tggcactcca taatttgcgg
      481 aattttcagc acttcttttt tgaaatcttc gaaaatattg cccgatttgg attgcagctt
      541 cagctcgaca aaaaccaatg gcggtttgcc caacagatgg ggattgagat gggcgtgata
      601 gccggaaata taatgttccc gctccaaacg gcataccctc tctgtaacgg gcgtgctgga
      661 caaccctacc ttctcggcaa gctccgtcat caggatacgg gcattttgct gaagaatttt
      721 gaggatgcgg aaatcgattt tatctagttc tttcatttgg attaccttgt atttattatt
      781 gattttaaca aatagagtat aaatttggga aagcaattat atcaggaaaa gcaaaccgcc
      841 ttcctacctg aaaactgctg ctctggcttg aagacacaag gttctttaat attttaaaag
      901 ccttgccgtt ggattataat tccccaattg atttcttaat tttgctaata aacacttgtt
      961 tggtaaggaa tgaatttatg cggcctttga acgtgcagat caggttgggc aaccttaggc
     1021 acaattatcg gattttgaag gaaatgcacg gaggcaagct gttggcggta gtgaaggccg
     1081 acgcatacgg acacggtgcg gtcagatgtg ctttcgcgct ggcagacttg gcagacggct
     1141 ttgccgtggc gacaatcgac gagggaatca ggctgcggga gagcggcatt acccatccga
     1201 ttgtcctttt agaaggcgta tttgaagcat cagagtacga agcggtcgaa caatactcgc
     1261 tttggccggc agtcggaaac caatggcagc ttgaggcttt gctttcccgc cattggaaaa
     1321 aacctgtcaa ggtctggttg aaaatggatt cgggaatgca ccgtaccgga tttttccctc
     1381 atgattacgc ttcggcatat gcggcattga aacagtcgga atatgtggac agtattgtca
     1441 agttctcgca tttctcctgt gcggacgaac ctgaaagcgg tatgacggaa atacagatgg
     1501 aagcattcga tttgggtacg aaagggctgg aaggcgaaga aagccttgcc aattcggcag
     1561 ctattttgaa tatccccgaa gcacgcaggg attgggggcg cgcgggcttg gcgttatacg
     1621 gcatttcccc gttcggagac agcgatgaca ggctgaaacc cgtgatgagg ctttcaaccc
     1681 gtattttcgg cgaacgcgtt ttacagccgc actcccctat cggttatggc gcaacatttt
     1741 ataccagtaa atctacgcgc gtcggtctga ttgcctgcgg ttatgcggac ggttatccgc
     1801 gccgcgctcc aagcaattcc cccgtcgccg tcgacggtaa attgacccgg gtcatcggca
     1861 ggatctctat ggatatgatg actatcgagc tggacgcttc gcaagaaggt ttgggacacg
     1921 aggtcgaact gtggggcgat acggtcaata tcaataccgt tgccgaagcg gccggaacca
     1981 tcccttacga attgatgtgc aatatcaaac gtgcaaaatt cacttatatc gagtaatcga
     2041 gtccaaacga aaatcccgtc tgaagctttt cagacggcat aaatgcgttt tgacaaaatc
     2101 agtaaaagac attgccaaat agaaaatact gataatgccc acaatctgaa accccatcct
     2161 tcccgcaaaa acggaaaatc aaaatcagaa acctaaaatt tcgtcattcc cgcgcaggcg
     2221 ggaatccggt tttttgagtt tccgtcattt ctgataaatt ctcgtcgttt ttcatttcta
     2281 gattcccgca tgcgcgggaa tgacaaaatt aaagtttcag aatttatttg aacaacaaac
     2341 tagattcccg ctttcgtggg gatgacggcg gataggtttt gttgtttcgg ataaattcct
     2401 gttgtttttt ggtttccaga ttcccacctt taaaagaatg acgtaagaaa gcagaaataa
     2461 gaacacgggg attttttaaa tttgcaatat tcttttctaa agacatttta cccaatgccc
     2521 ataaacaaaa atgccgcctg aagcctttca gacggcattt tcccatcaaa accgcaatca
     2581 gtttttcatc gattgaaccg gtgcgggaat cctgccgccc cggttgacga acacttcgca
     2641 cgaaccttct tttgccggca ttacaggcgc gtagcccaac agaccgccga actcgacgct
     2701 gtcgccgacg gttttgcccg ttaccggaat aatgcgcacg gcggtggttt tgctgttgat
     2761 catgccgatg gcggcttcgt cggcgatgat gccggaaatg gtgtgcgcgg gcgtgtcgcc
     2821 gggaacggca atcatgtcca aaccaacgga gcagacggcg gtcatggctt cgagtttgtc
     2881 cagcgtcaac acgcctgcct cggcggcggc aatcatacct tcgtcttcgg aaacggggat
     2941 aaacgcgccg ctcaaaccgc cgaccgcgct ggaagccatc atgccgccct ttttcacggc
     3001 atcgttcagc aatgccaaag ctgctgttgt gccgtgcgta ccgcagacgc tcaagcccat
     3061 ttcttcaaga atgcgcgcca ccgagtcgcc gacggcgggg gtcggtgcca gcgacaaatc
     3121 gagaatgccg aacgggatat tcagcatttt tgaggcttcg cggccgatga gttcgcccac
     3181 gcgggtgatt ttgaaagcgg ttttcttcac gacttcggcg acctcggtca ggctgaccgc
     3241 gtccgaattt tccagcgcgg ctttgaccac gcctggaccg gatacgccga cattaatcac
     3301 agcatccgct tcgcccgagc cgtggaacgc acccgccata aacggattgt cttccaccgc
     3361 gttgcagaac acgacgattt tggcgcagcc gaaaccttcg ggcgtgattt cagccgtgcg
     3421 tttgatggtt tcgcctgcca gcttgaccgc atccatattg ataccggcac gcgtgctgcc
     3481 gatattgatg gagctgcaca cgatatcggt agttttcatc gcttcgggaa cggaacggat
     3541 caacacctca tccgaaggcg acataccttt ttgcaccagc gcggaaaagc cgccgataaa
     3601 ggacacgccg atggctttgg ctgccttgtc caaagtctgc gccacgctga cataactgtc
     3661 ggctttggtc gccgccgcga tttgggcaat cggcgtaacg gaaatgcgct gattcacaat
     3721 cggcacgccg tatttggcgg aaaggtgttt cgccgttgcc accaagtctt tgccgaccgt
     3781 ggtgattttg ttgtaaatgt tttggtttaa cacgtcgatg tcggtgctga tgcagtcgtg
     3841 caaatcaatg ccgatggtaa tggtgcggac atcaaaattc tggtcggcaa ccattttgac
     3901 ggtttctaaa atttcgccgg attggatact catcacattc ctccgactca aatgcggtgc
     3961 atcgcttgga agatttcttc gttttgcata cggatgtcaa gcgcgagttt tttgctctct
     4021 tccgcaaaca aatccaaaat ctcctgccgc gatttagggc atttcgaggt atccaccaag
     4081 ataatcatag taaaaaaatc gtccatcagc tgttggctga tattgaggat gttgattcgg
     4141 ttttccgcca aaattttgga aacatcgtac acgatgccga cgcggtcttt accgatgacg
     4201 gtgatgactg aattgttcac aggcttactc cttgcagata tccgttaaaa tccgaaatta
     4261 taccaccgtc ggattttgaa gaatattgtc aacaatatat acatacaaaa tgccgtctga
     4321 aactatttca gacagcatca agattcaggg ttcgattaaa taaccatcct tatcccattg
     4381 ggttttcctg accaacttgt catcctgata aacagcctcg ctctttttag aaccatcttc
     4441 ataccactcc aaaaccaccc cgttgcgttt atggtggcgg atagacagtt ccgaaagtaa
     4501 tcggccgctt tcatcccaag tcagaatttt ggcaggctca tcgttgacca taaccatttc
     4561 cgtcttgata cttccatcgg cataccattg cttccatacg ccgttcgcct tattttgctt
     4621 aaactggatt tcgctttcct tgccgccgtt acggtaataa cggtatcccg taccctcact
     4681 caagccattt ttataaggca taaccgcaga ttttttaccg ttcggatacc agttgaccca
     4741 ttccccgtcc ggcttaccct tgctgaagcc ccccgccatt tttttctgac cattaaaatg
     4801 ccacaaaatc aacataccgt tttgcagggt aggcacaaaa gatttgattt gcgttgaagc
     4861 aacgatataa ggttcggaat atttcttcat cgacggataa taaaaatcct gcgcgtgtgc
     4921 gatacccgcc gccacactat attgcctgat ataagcggca gaagacatcg tcgccgtcag
     4981 tttcccgttc tgattaaaat aaacagaata ggtctgcgcc ggcaaagcgg ccgaaaaacc
     5041 caacagtacg attgaaaata caatccgaga taatttcttc attatgatag cgatataaaa
     5101 aacaattaac ttataaacaa tatggtaagg atttctcaac caagcgtcaa acccgaaaca
     5161 atgtatcgta aaaatgccgt ctgaaaacaa atcgtcttca gacggcattt ccctccaact
     5221 cactcttcgc ccaataactg ctcgcgcgtc aagaggaaaa caaaaccgtc gcccccgctg
     5281 gtttccaacc aagtaaaagg caactccgga tacgctgctt ccaatacatc cctgttatgc
     5341 ccgatttcca ccagcaatac acctttagga ttcagaaact ttgccgcatt cagaagaatc
     5401 tgcctggtgg catccaaccc gtccgccccg ctgcccaacg ccaattccgg ttcgtgcaaa
     5461 tattcctcag gcaaagcccc aaccgactct gcatccacat aaggcggatt ggaaacaatc
     5521 aaatcataag tgccttccag tccctcaaac aaatcggtat gaataagctg aatacgctct
     5581 tccagaccat aatcttcaat attgatccct gcaacttcca aagcatccaa actcacatca
     5641 accgcatcaa tttgggcatc aggataatgg tgcgccatct gaatggcaag gcaaccgctt
     5701 ccggtgcaaa gatccaaagc attatgcacc agctcatcgt attctatcca aggtcgaagt
     5761 ccgtcaccca gcaattcata aataaaagag cgcggtacaa tcacgcgttc atctacataa
     5821 aaatcaaact ccccctgcca ggcctggtgt gtcaaataag cggcaggaat gtgttcgaca
     5881 gcacgacgct caataaccgc cagcacttcc tctttttcag cttccaagag ttttgcatca
     5941 agatatgggg caagcatatc caaaggcaaa ttcaaagtat gcagaatcaa ataaaccgct
     6001 tcatcatgcg cattatctgt tccatgacca aaaaagagcc ctgcctcatt aaaacggctg
     6061 actgcaaaac gtaaaacatc acggatagtc gtcaattctt gtgcggcctg attaaacata
     6121 atatgaacca ttctgcgtat agatgctttt aattataaca gaaacaacaa gcaaaccttt
     6181 tcatatcgcc aaataaccac tcaatctacc catacaacta cataaatgcc gcgcgaagac
     6241 cattgcccga acggaaacgg cgatggcgga cggtatgggc aacctgatag gctgggaaga
     6301 aacggggctt gttgagggca agcagtggat aaccgcaaaa gacgacaagg tgtccgatgt
     6361 ctgcaatgcc aacggcggga tgggcgtaat cggtttgcac gagcctttct cccacggtgc
     6421 gttgacgata ccggagcatc caaatggcag gtgcgcggtt gttcccgttg tcgggcggac
     6481 aggcaagctg gcgaaaggca gccgcgcgat ggaaacgggc gatggacggc aggtgaggtt
     6541 gtttccgtat cgggcggcga attgggggaa tttgctgaaa caaaggagct tcgtaaagcg
     6601 gctatgcagt atgcgcgtga taactttgtc ggcaaaagct atgtcaatga aagcagcggg
     6661 catgaactga aggtaacttg gcaaggtgtg aaacacgctg cgtcaaaatc gaacagcatc
     6721 gaactttccc ttatggtcgc gcttgataaa gttttgatga atgcaaaata tgaaggaagt
     6781 tttcctaaca aattagggag ggatcatatt attgcggtac acaaatactc aaccggtgtc
     6841 agatttggca ataaagtctt aaaaatcagg ataatagccc gtgagaaatt tgatgggata
     6901 aaacattacg atcattttat tttgaaagac aaatgaaaaa accctgtcca gtatatctgg
     6961 gatagcttat ggaagcattt aacccagcct cggataaggc tttaaatcca tcatgccatt
     7021 tatacggtaa aaacaagggt ctgtac
//
LOCUS       DAXFZM010000095         7032 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.095, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000095 DAXFZM010000000
VERSION     DAXFZM010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7032)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7032)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7032
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.095"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..852
                     /locus_tag="ACFJAG_001848"
     CDS             <1..852
                     /locus_tag="ACFJAG_001848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006996595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HFC3981078.1"
                     /translation="ASSSVKKLADEKKEICQQQFFSVISKRDKLLYIVKSDYSKDAKA
                     PRVQVLFAEDYLSISLCDLWTNINTTGLEAEGNVELKNGKKPESLIETIIKLATNEND
                     IVLDYHLGSGTTAAVAHKMNRQYIGIEQMDYIETLAVERMKKVIDGEQGGISKAVNWQ
                     GGGEFVYAELSPFNETAKQQILACENSDGIKTLFEGLCERHFLKYNVSVNEFSQIIEE
                     PEFQSLALDEQKQMMLEMLDLNQMYISLSEMDDEQFAGCLNDDDKALSRAFYQSVKHQ
                     AEKKDGE"
     gene            842..3616
                     /locus_tag="ACFJAG_001849"
     CDS             842..3616
                     /locus_tag="ACFJAG_001849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HFC3981079.1"
                     /translation="MANNKTLFDWVEDRKSMLEEMEQTDFFALPEFVSNNLKYPFFEW
                     QKSALENFVIFDRTSKLKDFPDIKNRPTHLLFNMATGAGKTMMMAALILYYFEKGYRH
                     FLFFVNKNNIVYKTENNFIDPTHPKFLFTEKILQGDTVIPIRKVETFSQYSDGIEIKF
                     TSIQKLYNDIHTERENQTTLADLHELNLVILGDEAHHLNAQTKGKKQGELDLEKEMNE
                     RTSDAEIERKGWEHMVLELLLNKNGNPGQNVLLEFTATLPENAEVQQKYADKIITKFG
                     LKEFLQKGYTKEINLVSGTLNKKERVLHALLFAWYRHQIALKYGIANFKPVMLFRSKT
                     IDESKADYLAFLNWVENVQADDFSFLTTFSTSLNDSNNANEQGKTRTEQALKFMQENK
                     FEFVHLANWVKQNYQKHNVIITNSETNKTKTEKTDSETEKLLNNLEAADNPIRAIFTV
                     DRLTEGWDVLNLFDIVRLYEGQNGGGSNKKSGKTAAATVSEKQLIGRGVRYFPFAFEG
                     KQPNKRKFDNDMQHELRILEELFYYTHDEQSRYITELKNELRKDGYLPEKDDDKVLAT
                     FKLKSEFADNKDFRELLIWANKKIPNPNAKSNNADSLQANPQTLSFQVHGNQLLQETQ
                     FTADENDETARQIGTQNNFTQTIKMSEMERHIFNKALHIKGKNSQSLFHFDRLQSKLD
                     IQNRNELQNKLLKDWQIEFLGLEQDKQVRPDDKLAGCLKILEMVEKHLNESDIPFIGT
                     KEFTPKKLWEIFGTPKQKWVKKDDIKTAIATQNDWYVMDNFAGTGLEEALIQFISARL
                     GDLKSQYDVHLIRNEEVFKLNNFADGEGFMPDFVLLLKDKQKSSSDSVDDFLHYQIFI
                     EPKGGHLVENDSWKEAFLKSITVEYGRDKILQKNTPHYRLIGLPFFTDHQKNGQFTEL
                     FPLGAASLEK"
     gene            complement(3765..4937)
                     /locus_tag="ACFJAG_001850"
     CDS             complement(3765..4937)
                     /locus_tag="ACFJAG_001850"
                     /EC_number="1.1.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate dehydrogenase"
                     /protein_id="HFC3981080.1"
                     /translation="MKRDLSKMTCIEDLRRVAKRKMPRMFYDYIDSGSWTETTYRENT
                     SDFKDIRFRQKVLVNMEGRSLETKMIGGDVKMPVAIAPTGFTGMAHADGEILAARAAE
                     KFGIPFTLSTMSICSIEDVAENTSAPFWFQLYVMRDREFMENLIKRAKDAKCSALVLT
                     ADLQVLGQRHKDIKNGLSAPPKPTIANLINLATKPEWCMKMLNTERRTFRNIVGHAKN
                     VGDLSSLSSWTAEQFDPRLSWDDVARIKDLWGGKLIIKGIMEPEDAEKAAKSGADALV
                     VSNHGGRQLDDTVSAIKALPDIVSAVGSDIEVWMDSGIRSGQDILKAWALGAKGTMIG
                     RAFLYGLGAYGEEGVTRALEILYKEMDVSMAFTGHRDIQDVDASILRSKDWGRETV"
     gene            complement(5058..5300)
                     /locus_tag="ACFJAG_001851"
     CDS             complement(5058..5300)
                     /locus_tag="ACFJAG_001851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981081.1"
                     /translation="MVSLMVVVARVGFFIVGGIVQYLSVSVKYGGAVADCLFKWRYSL
                     ILLYLFGFLNQLVMFFEERRLGRFAGKRFQNDLIYF"
     gene            5287..5733
                     /gene="iscR"
                     /locus_tag="ACFJAG_001852"
     CDS             5287..5733
                     /gene="iscR"
                     /locus_tag="ACFJAG_001852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003690 - double-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly transcriptional regulator
                     IscR"
                     /protein_id="HFC3981082.1"
                     /translation="MRLTTKGRFAVTAMLDLAMNAQTGAVKLSAISERQNISLSYLEQ
                     LFGKLRRAGLVESLRGPGGGYILAAPPAQINIAQIISAAEDRLDATQCGSKANCHHGA
                     PCLTHDLWENLNKTINDYLGSVTLQSIIEQKNNGDGSRVVQFTHIH"
     gene            5762..6976
                     /locus_tag="ACFJAG_001853"
     CDS             5762..6976
                     /locus_tag="ACFJAG_001853"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0031071 - cysteine desulfurase activity
                     [Evidence IEA];
                     GO_process: GO:0044571 - [2Fe-2S] cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IscS subfamily cysteine desulfurase"
                     /protein_id="HFC3981083.1"
                     /translation="MTVKTPVYLDYAATTPVDKRVAEKMIPYLTETFGNPASNSHAFG
                     WTAEEAVEKARADIAALINADPKEIVFTSGATESDNLAIKGAANFYKTKGKHLITVKT
                     EHKAVLDTMRELERQGFEVTYLGVQENGLIDLEELKAAIRDDTILISIMWVNNEIGVV
                     QNIPAIGEICRERKIAFHVDAAQACGKVPVDVEAAKIDLLSMSAHKVYGPKGIGALYV
                     RRKPRVRLEAQMHGGGHERGFRSGTLPTHQIVGMGEAFRIAKEELAQDTAHYLKLRDI
                     FLKGIEGIEEVYINGDLEHRAPNNLNVSFNFVEGESLIMAVKELAVSSGSACTSASLE
                     PSYVLRALGRNDELAHSSLRITFGRMTTEEEVQFAAELIKSKIGKLRELSPLWEMFKD
                     GIDLNSIEWAAH"
BASE COUNT         2211 a         1681 c         1486 g         1654 t
ORIGIN      
        1 gctagtagta gcgtaaaaaa attagcagat gaaaaaaaag aaatttgcca acaacaattt
       61 ttttcagtta tttctaaacg agataaatta ttgtatatcg tcaagtcaga ttactcaaaa
      121 gatgcaaaag caccacgagt gcaggttttg tttgcagaag attatttgag tattagttta
      181 tgcgatttat ggacaaatat aaataccaca ggactagaag cagaaggaaa tgtagagtta
      241 aaaaatggta aaaagccaga aagtttaatt gaaaccatca ttaaactagc aaccaacgaa
      301 aacgacatcg ttctagacta ccacttgggc agtggcacaa ccgccgccgt cgcccataaa
      361 atgaaccgcc aatacatcgg cattgaacaa atggattata ttgaaacgct tgccgttgaa
      421 cgcatgaaaa aagtaattga cggcgagcaa ggcggtatct caaaagctgt gaattggcaa
      481 ggtggcggcg agtttgttta tgccgaactt tccccattta acgaaaccgc aaaacaacaa
      541 attttggcgt gcgaaaattc agacggcatc aaaacgctgt ttgaaggttt atgcgaacgc
      601 catttcttga aatacaacgt cagcgtaaat gaatttagcc aaattattga agagcctgaa
      661 tttcaatcct tggcattaga cgaacaaaaa caaatgatgc ttgaaatgtt ggatttaaat
      721 caaatgtata tttcattatc cgaaatggac gatgaacaat ttgcaggctg cctgaatgat
      781 gatgataaag cgttaagccg tgcgttctat caatcagtaa aacatcaagc ggagaaaaaa
      841 gatggcgaat aataaaacgt tgtttgattg ggtggaagac cgcaaatcaa tgctggaaga
      901 aatggaacag acggattttt tcgcgctgcc tgaatttgtt tccaataatt taaaatatcc
      961 gttttttgaa tggcaaaaat cggctttaga aaactttgtg atttttgacc gcacttcaaa
     1021 attaaaggat ttccccgaca tcaaaaaccg ccctacccat ttgctgttca atatggcaac
     1081 aggtgcaggc aaaacgatga tgatggcggc attgattctg tattattttg agaaagggta
     1141 tcggcatttt ttatttttcg tcaataaaaa caatatagta tataaaacgg aaaataattt
     1201 tatcgacccg acgcatccaa aatttttatt taccgagaaa attttgcaag gtgatacggt
     1261 aattcccatt cgcaaagtgg agacatttag ccaatattca gacggcattg aaattaaatt
     1321 taccagcatt caaaaactat ataacgatat tcacaccgag cgagaaaatc aaaccacatt
     1381 ggcggatttg cacgaattaa atcttgtgat tctgggcgat gaagcacacc atttaaacgc
     1441 gcaaaccaaa ggcaaaaaac aaggcgaatt agatttagaa aaggaaatga acgagcgtac
     1501 cagcgatgcc gaaattgaac gcaaaggctg ggagcatatg gttttggagt tgttactcaa
     1561 taaaaatggc aatcccggcc aaaatgtgct gttggaattt accgccacac tgcctgaaaa
     1621 tgctgaagtg caacaaaaat atgctgataa aatcatcaca aaatttggtt taaaagaatt
     1681 tttgcaaaaa ggttatacca aagaaatcaa tttggtatcc ggtacgctga ataagaaaga
     1741 gcgggtgttg cacgctttat tgtttgcctg gtaccgccat caaatcgcgt tgaaatacgg
     1801 cattgccaat ttcaagcctg tgatgttgtt tagaagtaag acgattgatg aatcaaaagc
     1861 ggattatttg gcatttttaa attgggtaga aaatgtgcaa gcggatgatt tttcgttttt
     1921 aactacattt tcaacaagct taaacgatag caataacgcc aacgaacaag gcaaaacccg
     1981 taccgaacaa gccctaaaat ttatgcagga aaataaattt gagtttgtgc atttggcaaa
     2041 ttgggtgaaa caaaattatc aaaaacataa tgtcattatt accaactccg aaaccaacaa
     2101 aaccaaaact gaaaaaaccg acagcgaaac cgaaaaattg ctaaacaatt tggaagcggc
     2161 tgataatccg atccgtgcca tttttacggt ggatagatta accgaaggtt gggacgtttt
     2221 aaatttgttt gatattgtgc gtttgtatga agggcaaaac ggtggcggtt cgaataaaaa
     2281 atcaggcaaa acggctgccg ccaccgtatc ggaaaagcag ttgattggtc gcggcgtgcg
     2341 ttattttcca tttgcgtttg aaggtaaaca gccgaataaa cgcaaatttg acaacgatat
     2401 gcaacatgaa ttgcgtatct tggaagaatt gttttattac acgcacgatg agcaatcccg
     2461 ctatattaca gaactgaaaa acgagttacg aaaagacggt tatttgcctg aaaaagacga
     2521 tgataaggta ttggcaacat ttaagctcaa atctgaattt gcagataata aggattttag
     2581 agagttgtta atttgggcga ataaaaaaat ccccaaccca aacgccaaaa gcaataatgc
     2641 agacagcctg caagccaatc cgcaaacgct ttcattccaa gttcacggta atcaactgtt
     2701 gcaggaaacg caatttacag ccgatgaaaa tgatgaaaca gcccgacaaa tcggcacaca
     2761 aaataatttt actcaaacca taaaaatgag tgaaatggag cggcatattt tcaataaagc
     2821 attacatatc aaagggaaaa atagtcaatc tttattccat tttgaccgcc tgcaaagcaa
     2881 actcgacatt caaaatcgca atgaattgca aaataaattg ttgaaagact ggcagattga
     2941 atttttggga ttagagcaag ataaacaggt tcgcccggat gataaacttg caggctgcct
     3001 gaaaatcttg gaaatggttg aaaaacatct gaatgaaagt gatataccgt ttatcggtac
     3061 aaaagaattt acacctaaaa aattgtggga aattttcggc acgccaaaac aaaaatgggt
     3121 caaaaaagat gatataaaaa ctgctattgc cacgcaaaat gattggtatg tgatggataa
     3181 ttttgccgga acgggtttgg aagaagcgtt aattcaattt atttcagcgc gcttgggcga
     3241 tttgaaatct caatatgacg ttcatttaat ccgcaatgaa gaagtgttta aattgaataa
     3301 ctttgccgat ggcgaaggat ttatgccgga ctttgtttta ttgctgaaag ataaacaaaa
     3361 atcttcttcc gacagcgtgg acgacttttt gcattaccaa attttcattg aaccgaaagg
     3421 cgggcattta gtggaaaatg attcgtggaa agaagctttt ttaaaatcaa tcacagtgga
     3481 atatgggagg gataagatcc tgcaaaaaaa tacaccgcat tatcgtttga tcggtttgcc
     3541 gttttttact gatcatcaga aaaatggaca atttacagag ttattccctt taggtgcggc
     3601 atcgcttgaa aaatagagta gtgcattgca ggcagccccg ttcggcaaaa cttcctttac
     3661 aaaagggcgt tttgtcagat atttaatcaa cacattatta aaatacaacc aaattttaat
     3721 gccgtccgaa ccatgtattc agacggcatc gtatttttca gtatctaaac cgtttccctg
     3781 ccccaatcct tactcctcaa aatcgaggca tcgacatctt gaatatcgcg gtgtcccgta
     3841 aacgccatcg acacatccat ttccttgtac aaaatctcca gcgcgcgcgt tacgccttct
     3901 tcgccatacg cacccaaacc atacaggaac gcccgaccta tcatcgtgcc tttcgcaccc
     3961 aaagcccacg ccttcaaaat atcctgaccg ctgcggatac cgctgtccat ccaaacttcg
     4021 atgtcgctgc cgactgcgga aacaatatcg ggcaaggcct tgatggcgga cacagtatcg
     4081 tcgagctggc ggccgccgtg gttggaaacg accaatgcat ccgcaccgct tttcgccgcc
     4141 ttttccgcgt cttcgggttc cataatgcct ttgataatca gcttgccgcc ccacaaatct
     4201 ttaatccgcg ccacgtcgtc ccagcttaag cgcgggtcga actgttccgc cgtccacgaa
     4261 gaaagtgaag acaaatcgcc gacgtttttg gcgtgtccga cgatattgcg gaacgtgcgg
     4321 cgttccgtgt tcagcatttt catgcaccat tcgggcttgg tcgccagatt gattaaattg
     4381 gcgatggtcg gtttcggcgg cgcggacagg ccgtttttga tgtctttgtg gcgttgaccc
     4441 aaaacctgca aatcggcagt caataccaat gccgaacatt tggcatcttt cgcacgctta
     4501 atcaggtttt ccataaattc gcggtcgcgc atcacataaa gctgaaacca aaacggcgcg
     4561 ctggtgttct cggcaacgtc ttcaatcgag cagatggaca tggtggacaa cgtaaacgga
     4621 ataccgaact tctccgccgc acgcgccgcc aaaatttcgc cgtctgcgtg tgccatgccg
     4681 gtaaaacccg tcggcgcaat cgccaccggc attttcacat cccccccgat cattttggtt
     4741 tcgaggctgc gtccctccat attgaccaat accttttgtc ggaagcggat atctttgaaa
     4801 tccgaagtat tctccctata agtcgtttcc gtccacgaac ccgaatcgat gtaatcgtaa
     4861 aacatacgcg gcattttgcg cttggcaacg cggcgcaagt cttcgatgca ggtcattttg
     4921 ctcaaatcac gtttcatctt gtttttccct gtttaacagc ctgatggaat atgccgtctg
     4981 aaactgcttg agccttcaaa cggcatttcg ggcaataccc aaataaatca ctaagattta
     5041 gataatctat atcaatatta aaaataaatc aaatcgtttt gaaaccgctt gccggcaaaa
     5101 cgccccaacc gccgctcctc aaaaaacata actaactgat tcaaaaaacc aaacaaataa
     5161 agcaaaatca gactataccg ccatttaaac aaacaatcgg caacagctcc cccatacttg
     5221 actgaaacac tcagatattg gacaattccg cccactataa aaaagccgac acgggcaacc
     5281 accaccatga gactgaccac caaagggcgt ttcgccgtta ccgctatgct ggatttggcg
     5341 atgaacgcgc aaaccggcgc cgtcaaactc agtgccatca gcgaacgcca aaatatatcc
     5401 ctctcctatc tcgagcaatt gttcggcaaa ctccgccgcg ccggactggt tgaaagcctg
     5461 cgcgggcccg gcggcggcta catcctcgcc gcccctcccg cacaaatcaa catcgcccaa
     5521 atcatttccg ccgccgaaga ccggctggac gcgacccaat gcggcagcaa agccaactgc
     5581 caccacggcg cgccctgcct gacgcacgac ctttgggaga atttaaacaa aaccatcaac
     5641 gactatctcg gcagcgttac cctgcaaagc atcatcgaac agaaaaacaa cggcgacggc
     5701 agccgcgtcg tccaatttac acacatccat taaataacac ccgaaaaaga aagagcaaac
     5761 catgaccgtc aaaacccccg tttacctcga ctacgccgcc accacacccg ttgacaaacg
     5821 cgttgccgaa aaaatgattc cctatctgac tgaaaccttc ggcaaccccg cctccaacag
     5881 ccacgcattc ggctggacgg cagaagaagc cgtcgaaaaa gcccgcgccg acatcgccgc
     5941 cctgattaac gccgacccca aagaaatcgt cttcaccagc ggcgcgaccg agtccgacaa
     6001 cctcgccatc aaaggtgcgg caaacttcta caaaaccaaa ggcaaacacc tcatcaccgt
     6061 caaaaccgaa cacaaagccg tgctcgacac gatgcgcgaa ctcgaacgcc aaggctttga
     6121 agttacctac ctcggcgtgc aggaaaacgg tttgattgat ttggaagaac tcaaagccgc
     6181 catccgcgac gacaccatcc tgatttccat aatgtgggtg aacaacgaaa tcggcgtggt
     6241 gcaaaacatt cccgccatcg gcgaaatctg ccgcgaacgc aaaatcgcct tccacgtcga
     6301 tgccgcccaa gcctgcggca aagtgcctgt cgatgtcgaa gccgccaaaa tcgacttgct
     6361 ctcgatgtcc gcgcacaaag tgtacggccc caaaggcatc ggcgcgctgt acgtccgccg
     6421 caaaccgcgc gtccgcctcg aagcccaaat gcacggtggc ggtcacgagc gcggtttccg
     6481 ttccggcaca ttgccgaccc atcaaatcgt cggcatgggc gaggccttcc gcatcgccaa
     6541 agaagaattg gcacaagaca cagcgcacta cctgaaactg cgcgacatct tcctcaaagg
     6601 catcgaaggc atcgaagaag tctatatcaa cggcgacctc gaacaccgcg ccccgaacaa
     6661 cctgaacgtc agcttcaact tcgtcgaagg cgaaagcctg attatggcgg tgaaagaact
     6721 cgccgtatcc agcggatccg cctgcacctc cgcctcgctc gaacccagct acgtcctgcg
     6781 cgcgcttggc cgcaacgacg aactggcgca ctcatccctg cgcatcacct tcggccgcat
     6841 gaccaccgaa gaagaagtgc aattcgcggc agaactgatc aaatccaaaa tcggcaaact
     6901 gcgcgaactg tcgccgctgt gggaaatgtt caaagacggt attgatctga actcgatcga
     6961 atgggcggcg cattaagatt gatgtcaaac aaaggctgtc tgagaaagaa taccatgaaa
     7021 gttaaaatta tt
//
LOCUS       DAXFZM010000096         6941 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.096, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000096 DAXFZM010000000
VERSION     DAXFZM010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6941)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6941)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6941
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.096"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            328..774
                     /gene="yciA"
                     /locus_tag="ACFJAG_001854"
     CDS             328..774
                     /gene="yciA"
                     /locus_tag="ACFJAG_001854"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016790 - thiolester hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioester hydrolase YciA"
                     /protein_id="HFC3981084.1"
                     /translation="MQHEEGNRQRPQGELLLRTVAMPRDTNPNQDIFGGWIMSQMDLG
                     GGILAAEIARGRIVTVAVQEMNFIRPVKVGNVVCCYGHCVRVGNTSLQLKVEVWVKTL
                     MNDCVTEDRHLVTEAVFTYVAIDAEGNPRPIPKEGNPKLSGLLATP"
     gene            complement(825..1646)
                     /locus_tag="ACFJAG_001855"
     CDS             complement(825..1646)
                     /locus_tag="ACFJAG_001855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HFC3981085.1"
                     /translation="MAVLITGASAGFGEAMCRTFVGAGYRVIGAARRADRLQALADEL
                     GALFYPLEMDVSCRESVENVLNGIPDEFSDIDCLINNAGLALGLDTADKADFEDWETM
                     IQTNVLGLTFLTRKILPQMVERGGGYVMNLGSIAGNYAYAGSNVYGATKAFVRQFSLN
                     LRAELADKNIRVTNIEPGLCGNTEFSNVRFKGDNERVAGVYEGVEFIRPEDIAETALW
                     LYRRPAHMNVNTIEIMPVAQTFAGMKVIKTAVPEVREDFEKQSMSLFSRIRSWFK"
     gene            1765..2223
                     /locus_tag="ACFJAG_001856"
     CDS             1765..2223
                     /locus_tag="ACFJAG_001856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HFC3981086.1"
                     /translation="MKTQISLAATALALFLSACGNGGAPAQPKGEISENRTAAFKSMM
                     PDFSRMGKMVKGEEPYDVEKFKQAAAAFAESSKKPFTLFESDPQGNGRALPAVWSDGA
                     KFEAEKTKFAAAVEKLNAAAQTGKLDEIKAAYGETGASCKSCHDSFRAPE"
     gene            complement(2366..3502)
                     /gene="lst"
                     /locus_tag="ACFJAG_001857"
     CDS             complement(2366..3502)
                     /gene="lst"
                     /locus_tag="ACFJAG_001857"
                     /EC_number="2.4.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyllactosaminide
                     alpha-2,3-sialyltransferase"
                     /protein_id="HFC3981087.1"
                     /translation="MGLKKVCLTVLCLIVFCFGIFYTFDRVNQGERNAVSLLKDKLFN
                     EEGKPVNLIFCYTILQMKVAERIMAQHPGERFYVVLMSENRNEKYDYYFNQIKDKAER
                     AYFFYLPYGLNKSFNFIPTMAELKVKSMLLPKVKRIYLASLEKVSIAAFLSTYPDAEI
                     KTFDDGTNNLIRESSYLGGEFAVNGAIKRNFARMMVGDWSIAKTRNASDEHYTIFKGL
                     KNIMDDGRRKMTYLPLFDASELKAGDETGGTVRILLGSPDKEMKEISEKAAKNFNIQY
                     VAPHPRQTYGLSGVTALNSPYVIEDYILREIKKNPHTRYEIYTFFSGAALTMKDFPNV
                     HVYALKPASLPEDYWLKPVYALFRQADIPILAFDDKNQSHGKSK"
     gene            3639..3779
                     /locus_tag="ACFJAG_001858"
     CDS             3639..3779
                     /locus_tag="ACFJAG_001858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/arginine repetitive matrix 2"
                     /protein_id="HFC3981088.1"
                     /translation="MPPHIRHNAADAAAKRGKAISPFLSRRRVQTRQDRTKREQSRQN
                     MP"
     gene            3846..6071
                     /locus_tag="ACFJAG_001859"
     CDS             3846..6071
                     /locus_tag="ACFJAG_001859"
                     /EC_number="1.1.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004450 - isocitrate dehydrogenase (NADP+)
                     activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HFC3981089.1"
                     /translation="MTQKSTIVYTHTDEAPALATQSLLPIVQAFARHADIDVKTADIS
                     LSGRILAAFPEYLTEAQRVPDALAELGELVKQPGANVIKLPNISASVPQLTAAIKELQ
                     SKGFAVPDYPADPQTDEEKAVRERYDRIKGSAVNPVLREGNSDRRAPKAVKNFAKKNP
                     HSMGAWAKDSKTHVATMQSGDFFHNEQSVTVPDATSVSIVFTDKQGNKKELREPVALK
                     AGEIIDAAVMSKKALLAFLAEQVKDAKAKGVLFSLHMKATMMKVSDPIIFGHAVKVFF
                     APVFEKFGGKLAAAGVNVNNGFGNLIANLDKLDADTRAAVEAEITAVYAANPDLAMVD
                     SDKGITNLHVPSDVIVDASMPAMIRNSGRMWDKNGKAQDTKAVIPDSSYAGVYQATID
                     FCREHGAFDPTTMGTVPNVGLMAQAAEEYGSHNKTFEIEADGQVQVIDAAGNVLMQHD
                     VEAGGIWRMCQTKDAPVKDWVQLAVNRARLSNTPAVFWLDENRPHDKSLLAKVKAYLA
                     ELDTNGLDIRVLAPEEAAKFSLGRLKNGEDTISVTGNVLRDYLTDLFPILELGTSAKM
                     LSIVPLMNGGGMFETGAGGSAPKHVQQFLEENHLRWDSLGEFLALAVSFEHLAQKTGN
                     AKAQVLADTLDAATEKLLLNDKSPKRKAGELDNRGSHFYLTLYWAQELAAQDKDAELK
                     AAFAPLAATLTADEAKIVEELSAVQGKAVGIGGYYAANPEKAAQAMRPSATFNQVLNA
                     L"
     gene            6368..6670
                     /locus_tag="ACFJAG_001860"
     CDS             6368..6670
                     /locus_tag="ACFJAG_001860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981090.1"
                     /translation="MKTVPTILTGILLATALPASAHGMHKSKPLAMDELPPICQQYFK
                     RTETCYNKAGNKADFARNNTKFLFQALPAADLGQRKQMCQIAMDSFAEKTRNLNCE"
BASE COUNT         1843 a         2051 c         1559 g         1488 t
ORIGIN      
        1 aacaccgcaa tctcgaaacc cgtcattccc gcgcaggcgg gaatctagga tgcggaatct
       61 agagaaacct tttaaccgat aagtttccgt gcggacaggt ctggattccc gcctgcgcgg
      121 gaatgacggt tcggttgctt agggtaggat ttggcgggat tggtgggctg aagcccgccc
      181 tacgcatccg ccctacaata ctccttgcga atctgtcccg cgcccgacct tgtatgtctc
      241 aaatgggtta aactacgcac ttcccgactt cccgtttcgg gcaggggtgc aggtccgatt
      301 tatatttcaa taaaacaagg aaactttatg cagcacgaag aaggcaaccg ccaacgccct
      361 caaggcgaac tgctcctgcg taccgtcgct atgccgcgcg ataccaatcc caaccaagac
      421 attttcggcg gctggattat gtcgcaaatg gatttgggcg gcggcatatt ggcggcggaa
      481 atcgcgcggg ggcgcatcgt taccgtcgcc gttcaggaaa tgaacttcat ccgcccggtc
      541 aaggtcggca acgtcgtctg ctgctacggg cattgcgtcc gcgtgggcaa tacttccctc
      601 cagcttaaag tcgaagtctg ggtgaaaact ttgatgaacg attgcgttac cgaagaccgc
      661 catctcgtaa ccgaggcggt gttcacttat gtcgccatcg atgcggaagg caatccgcgc
      721 ccgattccga aagaaggcaa ccccaaattg tcaggcttat tggccacccc gtaagaatac
      781 ccgtaaaaat gccgtctgaa actgtcttca gacggcattc cgtatcattt gaaccaagac
      841 ctgatgcggg aaaacagcga catactctgt ttttcaaagt cttcccgcac ttcgggcacg
      901 gctgttttta tgaccttcat tcctgcaaaa gtctgcgcca caggcataat ttcaatcgtg
      961 ttcacattca tatgcgccgg ccggcggtac agccacaatg cggtttccgc aatatcttcg
     1021 gggcggataa attccacacc ctcatacacg cccgccaccc tctcgttatc gcctttgaag
     1081 cgcacgttgg aaaactccgt attgccgcac aaacccggct cgatattggt aacgcggatg
     1141 ttcttatccg ccagctctgc gcgcaaattc aggctaaact ggcgcacaaa cgccttggtc
     1201 gccccgtaaa cgttgctgcc ggcataagca taattgcctg caatcgaacc caaattcatc
     1261 acataaccgc cgccgcgttc caccatttgc ggcaaaatct tgcgcgtcag gaacgtcaaa
     1321 cccaaaacat tggtttgaat cattgtttcc caatcttcaa aatccgcctt gtccgccgtg
     1381 tccaaaccca aagccagccc ggcattgttg atgaggcagt cgatgtcgga aaattcatcg
     1441 gggatgccgt tcaagacgtt ttccaccgac tcgcggcacg acacgtccat ttccaaaggg
     1501 taaaacaaag cacccaattc atccgccaaa gcctgaagcc tgtccgcacg gcgcgccgca
     1561 ccgataacgc ggtatcccgc cccgacaaac gtgcggcaca tcgcttcgcc gaagcctgcc
     1621 gaagcaccgg taattaaaac agccattgtt tttcctttct ttctcgtttc ccaaacctgt
     1681 ttcaggtatc ataacaccct tcagacggca tcgcgccggc tgaaaacgac aacaaccgta
     1741 ccaccacgac aggacacatt caacatgaaa acccaaatca gccttgccgc aaccgccctc
     1801 gccctattcc tttccgcctg cggaaacggc ggcgcgcccg cacagcccaa aggcgaaatt
     1861 tccgaaaacc gcaccgccgc gttcaaatct atgatgcccg acttctcgcg tatgggcaaa
     1921 atggtcaaag gcgaagagcc ttacgatgtc gaaaaattca aacaggcggc ggcggcgttt
     1981 gccgaaagca gcaaaaaacc gttcacactt tttgagtccg atccgcaagg caacggccgc
     2041 gccctgcctg ccgtttggtc ggatggtgca aaatttgaag ccgaaaaaac aaaattcgcc
     2101 gccgccgtcg aaaaactcaa cgccgccgcc caaaccggca aactggacga aatcaaagcc
     2161 gcctacggcg aaaccggcgc aagctgcaaa tcctgccacg acagtttccg cgcgcccgaa
     2221 taacatccga aacagaacaa tgccgtctga atccttcaga cggcattttc tttgtcattt
     2281 cgccacgcgc aaagcaatcg gaaattatct tcaattcaaa aaatacgcca tatcctgatt
     2341 tttgccttac ttactccgcc attttctatt ttgatttacc atgcgattga tttttatcgt
     2401 caaatgccaa aatcggaatg tcggcctgac ggaacagcgc ataaacgggc ttgagccaat
     2461 aatcttccgg aagggaagcc ggtttcaatg cgtaaacgtg cacattggga aaatccttca
     2521 tcgtcaacgc cgcaccgctg aaaaaggtat aaatttcata cctcgtatgc gggtttttct
     2581 taatttcgcg caaaatatag tcttcgatga catagggcga atttaacgcg gttacgccgg
     2641 aaagcccgta ggtctggcgg ggatgcggcg cgacatattg tatgttgaaa ttttttgccg
     2701 ccttttccga aatttccttc atctctttgt cgggcgaacc caaaagtatc cgcaccgtgc
     2761 cgcccgtttc gtcccccgcc ttcagttcgg acgcatcgaa cagcggcagg taagtcatct
     2821 tgcggcggcc gtcatccata atgtttttca aacccttgaa tatcgtgtaa tgctcgtcgg
     2881 aagcattgcg ggttttggcg atgctccaat ccccgaccat cattcgggca aaattccgct
     2941 taatcgcccc gtttacggca aactcgccgc ccaaatagct gctctcccgt atcaggttgt
     3001 ttgtgccgtc gtcaaaggtt ttgatttccg catccgggta agtactcaaa aaggcggcaa
     3061 tactgacttt ttccaaactc gccaaataaa tccgcttgac cttcggcagc agcatcgact
     3121 tcaccttcag ctccgccatc gtcggaatga aattaaacga tttgttcaaa ccgtagggca
     3181 ggtagaaaaa atacgcccgc tccgccttat cctttatctg attgaaataa taatcgtatt
     3241 tttcattcct gttttcagac atcagcacca cataaaaccg ctcccccgga tgctgcgcca
     3301 taatcctttc tgccaccttc atctgcaata tggtatagca gaaaatcaga ttgacgggtt
     3361 tcccctcttc attgaagagt ttgtccttca gcagggaaac cgcgttcctt tccccctgat
     3421 ttacccggtc aaacgtataa aatatcccga agcaaaaaac aatcaggcac aacacggtca
     3481 aacagacttt tttcaacccc atatccctaa aaactccatt ccgacaaatt gaacatacgc
     3541 cccgagtgtc ccggtgcgga aactccggtg cggaaaatgc ggaattttag cagatattcc
     3601 gacagttgcc gaatattaaa attaatttta ccgaaaatgt gccgccgcac atcaggcaca
     3661 acgccgccga cgccgccgcc aaacgcggga aagccatttc ccccttcctt tcccgccgcc
     3721 gcgttcaaac acgccaagat cgaacaaagc gcgaacaaag ccgccaaaat atgccataat
     3781 agccgcgcac attccccgcg caatgtgttt caaaagaaaa aaccaaccta caagagaata
     3841 atcctatgac tcaaaaatcc accattgttt atacccatac cgacgaagcc cccgcgctgg
     3901 cgacccaatc gctgctgccg attgtgcagg cgtttgcccg ccacgccgat attgatgtca
     3961 aaactgccga catttccctg tccggccgca ttttggcggc attccccgaa tatctgaccg
     4021 aagcgcagcg cgtacccgac gcgcttgccg aattgggcga actggtgaaa caacccggtg
     4081 caaacgtaat caaactgccg aacatcagcg catccgtacc tcaactgacc gccgcgatta
     4141 aagaattgca gtctaaaggc tttgccgttc ccgactatcc tgccgaccct caaaccgatg
     4201 aagaaaaagc cgtacgcgaa cgctacgacc gcatcaaagg cagcgcggta aaccctgtcc
     4261 tgcgcgaagg caactccgac cgccgcgcgc ctaaagcggt gaaaaacttt gccaaaaaaa
     4321 atccgcacag catgggcgcg tgggcgaaag actccaaaac ccacgttgcc accatgcaaa
     4381 gcggcgactt tttccataac gaacaatccg ttaccgtacc cgatgcgact tccgtatcca
     4441 tcgtgttcac cgacaaacaa ggcaataaaa aagagctgcg cgagcctgtt gccctgaaag
     4501 ccggcgaaat cattgacgcg gccgtaatga gcaaaaaagc cctgctcgcc ttccttgccg
     4561 aacaagtgaa agacgcaaaa gctaaaggcg tattgttctc gctgcatatg aaagccacga
     4621 tgatgaaagt gtccgacccg attatcttcg gacacgccgt caaagtgttc ttcgcgcctg
     4681 tatttgaaaa attcggcggc aaactggctg ccgcaggcgt caacgtcaac aacggcttcg
     4741 gcaacctgat tgccaatctg gacaaactgg atgcggacac ccgcgccgcc gtcgaagctg
     4801 aaatcaccgc cgtttacgcc gccaacccgg atttggcgat ggtcgattcc gacaaaggca
     4861 tcaccaacct gcacgttccc agcgatgtca tcgttgatgc ttctatgcct gcgatgatcc
     4921 gcaattccgg ccgtatgtgg gacaaaaacg gcaaagcgca agacaccaaa gccgtgattc
     4981 ccgacagcag ctatgccggt gtttaccaag caaccatcga tttctgccgc gaacacggcg
     5041 cattcgatcc gacaacaatg ggtactgtgc ccaacgtcgg actgatggcg caagcggcgg
     5101 aagaatacgg ctcacacaac aaaacctttg aaatcgaagc cgacggtcag gttcaagtga
     5161 ttgatgcggc gggcaatgtc ctgatgcagc acgacgttga ggcaggcggc atctggcgca
     5221 tgtgccaaac caaagacgct cccgtcaaag actgggtaca actcgccgtc aaccgcgccc
     5281 gcctgagcaa cacgcccgcc gtgttctggc tcgacgaaaa ccgtccgcac gacaagagtc
     5341 tgctcgccaa agtcaaagcc taccttgccg aattggatac caacggcctc gacatccgcg
     5401 tcctcgcgcc cgaagaagcc gctaaattca gcttgggccg tctgaaaaac ggcgaagaca
     5461 ccatttccgt aaccggcaac gtcctgcgcg attatctgac cgacttgttc ccgattttgg
     5521 aactgggtac cagcgcgaaa atgctgtcca tcgttccatt gatgaacggc ggcggtatgt
     5581 ttgaaaccgg cgcgggcggt tctgcaccga aacacgtcca acagttcctc gaagaaaacc
     5641 acctgcgttg ggactcattg ggcgaattcc tcgcgcttgc cgtatcgttt gaacatctgg
     5701 cgcaaaaaac cggcaacgcc aaagcccaag tcctcgccga cactttggat gccgccaccg
     5761 aaaaactgct gttgaacgac aaatcgccca aacgcaaagc gggcgaactc gacaaccgcg
     5821 gcagccattt ctacctcacc ctctactggg cgcaagaatt ggcggcgcaa gacaaagatg
     5881 ccgaactgaa agccgcattt gctccattgg cagccacttt gactgccgac gaagccaaaa
     5941 tcgttgaaga actctctgcc gtacaaggca aagcggtcgg catcggcggc tactacgcag
     6001 ccaatcctga aaaagccgca caagcgatgc gtccgagcgc aacctttaat caagtactaa
     6061 acgccttata agcacaaagg caaaaatgcc gtctgaacat tcgtcgttca gacggcatta
     6121 gttatcccta tctgcctgat tatgattaaa cgccgcaccc attggatata tagtggatta
     6181 acaaaaacca gtacggcgtt gccccgcctt agctcaaaga gaacgattct ctaaggtgct
     6241 gaagcaccaa gcgaaccggt tccgtactat ttgtactgtc tgcggcttcg tcaccttgtc
     6301 ctgatttttg ttaatccact ataaatcata taatctttag ttttttaccc tacggaaaga
     6361 caataatatg aaaactgttc caaccatcct gaccggcatc cttttggcaa ccgcccttcc
     6421 cgcatccgca cacggtatgc ataagagcaa acccctggct atggacgagc tgccgccgat
     6481 ttgccaacaa tatttcaaac gcaccgaaac ctgttacaac aaagccggaa acaaagcaga
     6541 tttcgcacgc aacaacacca aattcctatt ccaagcccta cctgccgccg atttgggaca
     6601 gcgtaagcaa atgtgccaaa tcgctatgga ttcgtttgca gaaaaaaccc gcaatctgaa
     6661 ttgcgaataa agccgcatca gcaatagcaa tgccgtctga aacaaaggtt cagacggcat
     6721 tctcacatca aaacgtaccg gctgataaaa cccgccttcc ccgcatccct gacccgaaca
     6781 ggattaaacg gagtaacggt ttcggccatt atggcaagtc cccatcccaa aaatgaccat
     6841 ataaattaat accataaaac attgataaaa agcgtctgcc ggttgcggtt tgttgcaggg
     6901 cgttacggaa aatcatcgta aaccgatgat ttttatatag t
//
LOCUS       DAXFZM010000097         6856 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.097, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000097 DAXFZM010000000
VERSION     DAXFZM010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6856)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6856)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6856
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.097"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(237..3386)
                     /gene="pilC"
                     /locus_tag="ACFJAG_001861"
     CDS             complement(237..3386)
                     /gene="pilC"
                     /locus_tag="ACFJAG_001861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilC family type IV pilus tip adhesin"
                     /protein_id="HFC3981091.1"
                     /translation="MNKTLKRRVFRHTALYTAILMFSHTGGGGAMAQTHQYAIIMNER
                     KQPEVKWKDQYNQSALKDKSRERTFSHTSQKNSLGITSNFISFNNNDELVSQQSGTAV
                     FGTATYLPPYGKVSGFDTAELNKRGNAVNWIHTTRPGLAGYGYTGIRCGSTKDCPKLT
                     YKTRFSFDNPDLLKTRGGLDRHTEPSRENSPIYKLKDYPWLGVSFNLGGEGTAKDGRS
                     SSKLVSSFDENNSNSNQNLVYTTEDHRISLSNWQQETTAMAYYLNAKLHLLDKKGIKD
                     ITGKTVRLGVLKPSIDVKTQNTGLSGILNFWSKWDIKDNGQIPVKLGLPEVKAGRCIN
                     EPNPNKNTQAPSPALTAPALWFGSVQNGKVQMYSASVSTYPGSSSSRIFLQELKTRTD
                     PARPGRHSLAALDTQNIKSREPNFNSRQTVIRLPGGVYRIAPTRDRIVGLNGNDGKND
                     IFGIYKDRLVTPEVDEWAKVLLPWTVRYYGNDDIFKTFNQPNNKKQSDKKQYSQKYRI
                     RTKEDDNDKPRDLGDIVNSPITAVGGYLATSANDGMVHIFKKTGTDQRGYELKLSYIP
                     GTMERKDIEGNDSDLAKELRAFAEQGYVGDRYGVDGGFVLRRITDDQDKQKHFFMFGA
                     MGLGGRGAYALDLTKIDSNPVGVSMFDVQNDKNNNKNDSNRVKLGYTVGTPQIGKTQN
                     GKYAAFLASGYAAKDIVSGDNTTALYVYDLENGSGSLIKKIEVKDGKGGLSSPTLVDK
                     DLDGIVDIAYAGDRGGNMYRFDLSDNDPNKWSVRTIFEGGKPITSAPAVSRLADKRVV
                     IFGTGSDLSEEDVVGTNPQYIYGIFDDDKGTVKVTVQNGTGGGLLEQTLTKENNTLFL
                     SNNKASGGSNGKGWVVRLREGERVTVKPTVVLRTAFVTIRSYTGMDKCGAQTAILGIN
                     TADGGALTPRSARPIVPDHNSVAQYSGHKKTTDGKSVPIGCMWKNSKTVCPNGYVYDK
                     PVNVRYLDEKKTDDFPVTADGDAGGSGTFKEGKKPGRNNRCFSGKGVRTLLMNDLDSL
                     DITGPMCGIKRLSWREVFF"
     gene            complement(4299..4689)
                     /locus_tag="ACFJAG_001862"
                     /pseudo
     CDS             complement(4299..4689)
                     /locus_tag="ACFJAG_001862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686761.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF559 domain-containing protein"
     gene            complement(4852..5231)
                     /locus_tag="ACFJAG_001863"
                     /pseudo
     CDS             complement(4852..5231)
                     /locus_tag="ACFJAG_001863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687733.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
     gene            complement(5285..6418)
                     /gene="carA"
                     /locus_tag="ACFJAG_001864"
     CDS             complement(5285..6418)
                     /gene="carA"
                     /locus_tag="ACFJAG_001864"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004088 - carbamoyl-phosphate synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006541 - glutamine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HFC3981092.1"
                     /translation="MSTPALLVLADGSVFHGTSIGYEGSASGEVVFNTSMTGYQEILT
                     DPSYCKQIVTLTYPHIGNTGTNAEDEESRSVYAAGLIIRDLPLLHSSFRASESLHDYL
                     VRNETVAIADIDTRRLTMLLREKGAQGGAILTGADATVEKAQELIAAFGSMVGKDLAK
                     EVSCTETYEWTEGEWELGKGFVTPDKQPYHVVAYDFGVKTNILRMLASRGCRLTVVPA
                     QTSAEDVLALNPDGVFLSNGPGDPEPCTYAIEAVQKLMESGKPIFGICLGHQLISLAI
                     GAKTLKMRFSHHGANHPVQDLDSGKVVITSQNHGFAVDADTLPANARITHKSLFDNTL
                     QGIELTDKPVFCFQGHPEASPGPQDVGYLFDKFIGNMKAAKQA"
BASE COUNT         1392 a         1794 c         1866 g         1804 t
ORIGIN      
        1 aaaacagaaa accaaaatca gaaacctaaa attcgtcatt cccacgaaag tgggaatcca
       61 ggactcagga cctgaaaaac ctttttaccc gataagttcc cgtaccgacc ggtccggatt
      121 cccgcctgcg cgggaatgac gcgtttcatt tgccgccccc tcccgaaaaa cgcaaaaaaa
      181 tgccgtccga agacctttca gacggcattt gcggaaaaac cggccgcgcg ggcgggtcag
      241 aagaagactt cgcgccagct taagcgtttg ataccgcaca tcgggccggt aatatccaag
      301 ctgtccaaat cgttcatcag cagggtgcgc acaccttttc cggagaagca ccggttattg
      361 cggccgggtt ttttaccctc tttgaatgtt ccgctgccgc ccgcatcgcc gtctgccgtg
      421 acggggaaat cgtctgtttt cttttcgtcc aggtagcgca cattaaccgg tttgtcgtaa
      481 acatatccgt tcgggcagac ggttttgctg tttttccaca tacagcctat ggggacggac
      541 ttgccgtcgg tggttttctt atggccggaa tattgcgcaa ccgaattgtg atccggcaca
      601 atcgggcgcg cgcttctcgg agtcaatgcg ccgccgtcgg cggtattgat gcccaaaatg
      661 gcggtttgcg cgccacattt gtccatgccc gtatagctgc ggatggtgac aaaggcggta
      721 cgcaatacca cggtcggttt gacggtaacg cgttctcctt ccctcaatct cactacccac
      781 cctttgccgt tcgatccgcc ggatgcctta ttattgctca ggaacaaggt gttattttcc
      841 ttcgtaagcg tttgctcgag caacccgcct cccgtgccgt tttgtaccgt taccttaacc
      901 gtccccttat cgtcgtcaaa gataccgtaa atatattgtg gattcgtacc gactacatcc
      961 tcttcactca aatcgctgcc cgtgccgaag atgacgacgc gtttgtctgc cagtcgggaa
     1021 acggcgggcg cggaagtaat cggcttcccg ccttcgaaaa tagtgcgtac agaccatttg
     1081 ttcgggtcgt tgtcgctcaa atcaaagcgg tacatattgc cgccccggtc gccggcatag
     1141 gcgatatcga caatgccgtc caaatcttta tccaccagcg tgggggacga aagcccgccc
     1201 ttgccgtcct tcacttcgat ttttttaatc agactaccac tgccgttttc caaatcatat
     1261 acatacagcg cggttgtatt atcgccgctg acaatatctt tagccgcata accggaagcg
     1321 aggaaggcgg cgtatttgcc gttttgggtt ttgccgattt gcggcgtgcc gacggtgtag
     1381 cctaatttca cgcgattact gtcattctta ttgttatttt tgtcgttttg gacatcaaac
     1441 atggaaacgc cgaccgggtt gctgtcgatt ttggtcaaat ccaaggcgta tgcgcctctg
     1501 ccgcccaggc ccatcgcacc aaacataaag aaatgttttt gcttgtcttg gtcatctgta
     1561 atgcggcgca agacaaagcc gccgtccacg ccgtagcggt cgcccacata gccttgttcg
     1621 gcaaaggcgc gcagctcttt ggcgaggtcg gagtcattgc cttcaatatc cttacgctcc
     1681 atcgtaccgg ggatgtagct gagcttcagt tcgtagcctc gttggtctgt gccggttttt
     1741 ttgaagatat gcaccatccc gtcgttggca gaagttgcca gatacccgcc gaccgccgtt
     1801 atcgggctgt tgacgatgtc gcccaaatcg cggggtttgt cattgtcatc ttcttttgtg
     1861 cggatgcggt atttttggct gtattgtttt ttgtcgcttt gttttttgtt gtttggttgg
     1921 ttgaatgttt taaatatatc gtcattaccg taataccgga ccgtccaagg cagcagcact
     1981 tttgcccact cgtcgacctc aggtgtgacg agcctgtcct tgtagatgcc gaaaatgtcg
     2041 tttttgccgt cattgccatt caaacccacg atcctgtcgc gagtcggggc gatccggtac
     2101 acgccgcccg gcaatcggat cacggtctgc cttgagttga aattcggctc gcggcttttg
     2161 atgttctgcg tatccaaagc ggcgagggaa tgccggccgg gccgggcggg gtcggttcga
     2221 gttttcagct cttggaggaa gatgcggctg ctcgaactgc cggggtaggt ggaaaccgaa
     2281 gcggaataca tctgcacctt accattttgc acagagccga accacagcgc gggggcggtc
     2341 agtgccggcg aaggggcttg ggtattctta ttggggttcg gttcgttgat gcagcggcct
     2401 gctttgactt ccggcaggcc gagcttgacc ggaatctgcc cgttatcttt aatgtcccac
     2461 ttagaccaaa aatttagaat gccgctaagc cccgtatttt gtgtcttcac atcgatgctc
     2521 ggcttcaaga cacccaaccg cactgttttg ccggtgatat ctttaatccc ttttttgtcc
     2581 agcaggtgca gcttggcgtt cagataatag gccatggcgg tcgtttcttg ctgccagttg
     2641 ctaagggaaa tacggtggtc ttctgtcgta tagacgaggt tttgattact attactattg
     2701 ttttcatcaa aagaagatac caatttgctg gatgatctgc catctttggc ggtaccctcg
     2761 ccgcccaaat tgaaagacac acccaaccat ggataatcct tcaatttgta aatgggcgaa
     2821 ttttcgcggc ttggctctgt gtgcctatcc agcccgcctc ttgtttttag caagtcggga
     2881 ttatcgaagg aaaatcgggt tttataggta agtttgggac agtctttggt acttccgcaa
     2941 cggataccgg tgtagccgta gcctgccagc ccgggccggg tggtatgaat ccaattgacg
     3001 gcattgccgc gcttgttcag ctcggcggta tcaaagccgg aaaccttgcc gtagggcggc
     3061 aggtaggtgg ctgtgccaaa aacggcagta ccgctttgtt gagaaacaag ctcatcgtta
     3121 ttgttgaatg agataaaatt gcttgtgatg ccgaggctgt ttttctggct cgtatggcta
     3181 aatgtccgct ccctgctttt gtcctttaat gctgattgat tatattgatc cttccacttt
     3241 acctcgggct gctttcgctc gttcatgata atagcgtatt gatgggtttg cgccatcgcc
     3301 ccccccccgc cggtatggga aaacatcaag atggcggtat aaagcgcggt atggcggaaa
     3361 acccgccttt ttaaagtttt attcatcgta tttccttttc ggtcaaaccc cccgcccttc
     3421 ggggcggcag gatcaggctt tgtccgggag gggtgcaagc ccttccgaat cagggcggcg
     3481 ccttatgtgc cgccctgcgt gttggaacat attttatccc ttaaatcttg cttcgcggga
     3541 taccgtcggc ggcaggcgcg ccgcaaacgg cgggattggg caaaccgccc gatcccgcgc
     3601 ccgccggatt gccggttgga aaaccccttt ggccggatgc aatgtatagg gttaccgcat
     3661 tattctaccc ttgcgcgctt atccatggta cagcggtttt tggcaatccg caaccgtttg
     3721 cccggcccgc cattgccgcc tgcgcggcaa tggcgggccg gggagagggc attctccaag
     3781 ttgcggcaac ctttcccaac aacttaaccg ccccaataca agccttgcgg cttgttgccc
     3841 tctctctagc tctctcccac agggagagag gacgggtcgg ctgttggggt tgaggtttgc
     3901 tgcaaggaaa acaggttgtg caggttgctt tttatttttc agacgacctg aaacaacagc
     3961 tgcaaatcta agttgccttt caaatcgcct gcaaccgaaa aatctgccga aacccactcc
     4021 ctcccccgtg ggggagggct ggggagaggg cattctccga atggtggcaa tctttcctaa
     4081 taccttcgcc gcccaaatac aagccttgcg gcttgttgcc ctctctccag ctctctccca
     4141 cagggagaga ggacgggtcg gctgttgggg ttgaggtttg ctgcaaggaa aacaggttgt
     4201 gcaggttgct tttttgcttt tcagacgacc tttttaaacg ctcaattcag ttaattttac
     4261 cttattattt tcaaaatcta atcaaaatca accgtttgct accgtgctgg ctgcttttcc
     4321 aattcctgca atacgcgcag gatttccgcc agtacatcgt ttgtctgctg caaaatttcg
     4381 tgattccaaa aacgcagcac ggtaaagccc aagctgttga gatataccgt ccgcgcgtgg
     4441 gtcgtatacg gcttgttccg cgtgctgccc gccgtctgct tcgacaatca gcttgggcgt
     4501 tacgcacata aaatcaacaa tataattccc catcggctgc tgtcggcgga atttatagcc
     4561 gttcagacgg cctgcccgca ggtgttgcca caattttgct tccgcctcgc tcatttcttg
     4621 acgcatggct ttggcgcgtt ggcgtagggc ggggttttcg gcggtcaata gtttctcggg
     4681 cgggttcatt tttgttatcg ggttgctgtt tgtgtaagcc ttacagcttg ttgccctctc
     4741 tctaactctt tcccacaggg agagaggacg ggtcggctgt tggggttaaa ggggctgcaa
     4801 ggaaaacagc ttgtgcaggc tgttttttat tttgcataat ccgtctgaaa attaataact
     4861 gctgatttcc agcaggttgc catcgggatc gcgcaggtaa accgattgga ttttgcccat
     4921 tgcgcctgtg cgcgctacga tgccgcttaa aggtttgatg ccgtgtgcgg ataattcctg
     4981 taaaaccgtt tccagtgggg cgtatcggtc agcaggcata aatccgctgt gccgcaggcg
     5041 gcgtgttgcg cgttaggctg aatttccgca ccgcgcccgt gtaggttgat tttctgactg
     5101 ccaaacaaca aagctttacg gttgttgcca aatgaaactt cttccatgcc caaaacttgt
     5161 gtgtaaaacg cgatggttcg gtcaatgtcg gcaacagtca gtactagatg gtcgagtgcg
     5221 ctaattttca tttccagctt tctttttcag acggcagcag catactgttg ccgtctgaaa
     5281 atcattatgc ttgttttgca gccttcatat tgccaatgaa tttgtcgaac aaatagccga
     5341 catcttgcgg acccgggctg gcttcggggt gtccttggaa acagaacacg ggtttgtcgg
     5401 tcagctcgat gccttgcaag gtattgtcga acaaggattt gtgggtaatg cgtgcgttgg
     5461 cgggcagggt gtcggcatcg acggcgaaac cgtggttttg gctggtaatg acgactttgc
     5521 cgctgtccaa atcttgcaca ggatggttcg caccgtggtg gctgaagcgc attttcaggg
     5581 ttttcgcgcc gatggcgagg ctgatgagct ggtgtcccaa gcagatgccg aaaatcggtt
     5641 tgccgctttc catcagtttt tgcacggctt cgatggcgta ggtgcaaggc tcggggtcgc
     5701 cggggccgtt ggacaggaac acgccgtcgg gattgagtgc caacacgtct tccgcgctcg
     5761 tttgtgcggg gacgacggtc aggcggcagc cgcgcgaggc gagcatacgc aggatgttgg
     5821 ttttcacgcc gaaatcgtag gcgacgacgt ggtaaggctg tttgtcaggg gtaacgaaac
     5881 ctttgcccaa ttcccattcg ccttccgtcc attcgtaagt ttccgtgcag gaaacttctt
     5941 ttgccaaatc tttgccgacc atgctgccga acgcggcgat gagttcttgc gctttttcaa
     6001 cggtggcatc cgcacctgtc agaatcgcgc cgccttgcgc gcctttttcg cgcaacagca
     6061 tggtcaggcg gcgggtgtcg atgtcggcga tggcgacggt ttcgttgcgt accaaatagt
     6121 cgtgcaggct ttcggaggcg cggaagctgc tgtgcaagag cggcaggtcg cggataatca
     6181 ggccggcggc ataaacgctg cggctttctt catcttcggc gttggtgccg gtgttgccga
     6241 tgtgggggta ggtgagggta acgatttgtt tgcagtagga cgggtcggtc agaatttcct
     6301 gatagccggt catcgaagta ttgaacacga cttcgccgga agccgaacct tcgtaaccga
     6361 ttgatgtgcc gtggaatacg ctgccgtcag cgaggacgag gagggcgggg gtgctcatga
     6421 tgggaatcct gtttttaata aaattcttga caatgccgtc tgaagggact tcggcagggg
     6481 gcatccggtc ggaaaaatcc ggtcaaaaaa aaacacgccg cgcaagatag acgcgtaacg
     6541 tgcttttcgg gcaagtgcct ataccctgaa agcagcatat tttaagacga aacatacccg
     6601 atttcaagcg caaacgcggc aggcgggctg atatgttcgc gcgaaaacgg aaatccgggg
     6661 cataaaaccg cccgctccgc gccccctatg cccgttacgc atttccccac gtccgcccgg
     6721 cgaaactatg ggaatacccg aaccgtcatt cccgcgcagg cgggaatccg gacctgtcgg
     6781 cacggaaact tatcgggtac aacggtttct tgagatttta cgtcctagat tcccgcctgc
     6841 gcgggaatga cggcat
//
LOCUS       DAXFZM010000098         6702 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.098, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000098 DAXFZM010000000
VERSION     DAXFZM010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6702)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6702)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6702
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.098"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..404
                     /locus_tag="ACFJAG_001865"
     CDS             <1..404
                     /locus_tag="ACFJAG_001865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981093.1"
                     /translation="QDEQNNGQLKPKGNKAEVAIRYDGKFKYDGKATHGPSVKNAVYA
                     HQIETDLYDGCYISTTTDKEIAKKFATSSGIENGYIYVLNRDLFGQYSIFEYEVEHPE
                     NPDEKEVTIRAEDCGCIPEEVIIAKELIEIN"
     gene            422..2206
                     /gene="lpdA"
                     /locus_tag="ACFJAG_001866"
     CDS             422..2206
                     /gene="lpdA"
                     /locus_tag="ACFJAG_001866"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004148 - dihydrolipoyl dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HFC3981094.1"
                     /translation="MALVELKVPDIGGHENVDIIAVEVNVGDTIAVDDTLITLETDKA
                     TMDVPAEVAGVIKEVKVKVGDKISEGGLIVVVEAEGAAAAPKAEAAAAPAQEAPKAAA
                     PAPQAAQFGGAADAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVG
                     CIPSKALLHNAAVIDEVRHLAANGIKYPEPELDIDMLRAYKDGVVSRLTGGLAGMAKS
                     RKVDVIQGDGQFLDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVTKLPF
                     IPEDPRIIDSSGALALKEVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQG
                     ADRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVA
                     AGRAPNGKLISAEKAGVAVTDRGFIEVDKQMRTNVPHIYAIGDIVGQPMLAHKAVHEG
                     HVAAENCAGHKAYFDARVIPGVAYTSPEVAWVGETELSAKASGRKITKANFPWAASGR
                     AIANGCDNGFTKLIFDAETGRIIGGGIVGPNGGDMIGEVCLAIEMGCDAADIGKTIHP
                     HPTLGESIGMAAEVALGVCTDLPPQKKK"
     gene            complement(2630..4180)
                     /locus_tag="ACFJAG_001867"
     CDS             complement(2630..4180)
                     /locus_tag="ACFJAG_001867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdgA family protein"
                     /protein_id="HFC3981095.1"
                     /translation="MKKPLISVAAVLLGVALGTPYYLGVKAEESLTQQQKILQKTGFL
                     TVESHQYDRGWFTSTETTVIRLKPELLHNAQKYLPDNLKIVLEQPVTLVNHITHGPFA
                     GGFGTQAHIETEFKYAPETEKVLERFFGKQVPVSLANTVYFNGSGKMEVSVPAFDYEE
                     LSGIRLHWEGLTGETVYQKGFKSYRNSYDAPLFKIKLADKGDAAFEKAHFDSETSDGI
                     NPLALGSSNLTLEKFSLEWKEGVDYNVKLNELVNLVTDLQIGAFINPNGSIAPSKIEV
                     GKLAFSTKTGESGAFIDSEGRFRFDTLVYGDEKYGPLDIHIAAEHLDASALTVLKRKF
                     AQISAKKMTEEQIRNDLIAAVKGDASGLFTHDPVLNIKIFRFTLPQGKIDVGGKIMFK
                     GMKKEDLNQLGLMLKKTEANIRMSIPQKMLEDLAVSQAGNIFSVNAEDEAEARASIAD
                     INETLRLMVDSTVQSMAREKYLTLDGNQIDTVISLKNNALKLNGKTLQNEPDPDFDEG
                     DMVSGQPH"
     gene            complement(4305..6547)
                     /locus_tag="ACFJAG_001868"
                     /pseudo
     CDS             complement(4305..6547)
                     /locus_tag="ACFJAG_001868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752514.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0015343 - siderophore-iron transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
BASE COUNT         1635 a         1673 c         1652 g         1742 t
ORIGIN      
        1 aacaagatga gcaaaataat ggacagttaa aacctaaagg taataaagct gaagttgcaa
       61 ttcgttatga tggtaagttt aaatatgatg gtaaagctac acatggtcca agtgtgaaga
      121 atgcagttta cgcccatcaa attgaaacag atctatatga cggatgttat atatctacga
      181 caacagacaa ggaaattgcc aagaaatttg caacaagctc cggcatcgaa aatggctata
      241 tatatgtttt aaatagagat ttgtttggtc aatattctat ttttgaatat gaggttgaac
      301 atccagaaaa cccagatgag aaggaagtaa caatcagagc tgaagattgt ggctgtattc
      361 ctgaagaagt gattattgct aaagagttga tagaaattaa ctaagttgaa aggtcaatat
      421 aatggcttta gttgaattga aagtgcccga cattggcgga cacgaaaatg tagatattat
      481 cgcggttgaa gtgaacgttg gcgacaccat cgccgttgac gacaccctga ttaccttgga
      541 aaccgacaaa gcgacgatgg acgtgcctgc cgaagttgcg ggcgtgatca aagaagtgaa
      601 agtcaaagtc ggcgacaaaa tctccgaagg cggtttgatt gtcgtcgtcg aagccgaagg
      661 tgcggctgcc gcccctaaag ccgaagcggc tgccgccccg gcgcaagaag cacccaaagc
      721 tgccgctcct gctccgcaag ccgcgcaatt cggcggtgct gccgatgccg agtacgacgt
      781 ggtcgtattg ggcggcggtc ccggcggtta ctccgctgca tttgccgctg ccgatgaagg
      841 cttgaaagtc gccatcgtcg agcgttacaa aactttgggc ggcgtttgcc tgaacgtcgg
      901 ctgtatccct tccaaagcct tgttgcacaa tgccgccgtt atcgacgaag tgcgccactt
      961 ggctgccaac ggtatcaaat accccgaacc ggaactcgac atcgatatgc ttcgcgccta
     1021 caaagacggc gtggtttccc gcctcacggg tggtttggca ggtatggcga aaagccgtaa
     1081 agtggacgtt atccaaggcg acgggcaatt cttggatcct caccacttgg aagtgtcgct
     1141 gactgccggc gacgcgtacg aacaggcagc ccctaccggc gagaaaaaaa tcgttgcctt
     1201 caaaaactgt atcattgcag caggcagccg cgtaaccaaa ctgcctttca ttcctgaaga
     1261 tccgcgcatc atcgattcca gcggcgcact ggcactgaaa gaagtaccgg gcaaactgct
     1321 gattatcggc ggcggcatta tcggcctcga gatgggtacg gtttacagca cgctgggttc
     1381 tcgcctggat gtggttgaaa tgatggacgg actgatgcaa ggcgcagacc gcgacttggt
     1441 taaagtatgg caaaaacaaa acgaataccg ttttgacaac attatggtca acaccaaaac
     1501 cgttgcagtc gagccgaaag aagacggcgt ttacgttacc tttgaaggtg caaatgcacc
     1561 taaagagccg caacgttacg atgccgtact ggtcgcggca ggccgtgcgc ctaacggcaa
     1621 actcatcagc gcagaaaaag ccggtgttgc cgttaccgat cgtggcttca tcgaagttga
     1681 caaacaaatg cgcaccaacg taccgcacat ctacgctatc ggcgatatcg tcggtcaacc
     1741 gatgttggca cacaaagccg ttcacgaagg ccacgttgcc gctgaaaact gtgccggcca
     1801 caaagcctac ttcgacgcac gcgttattcc cggcgttgcc tacacttccc ccgaagtggc
     1861 atgggtcggt gaaaccgaat tgtctgccaa agcatcaggc cgcaaaatca ccaaagccaa
     1921 cttcccatgg gcggcttccg gtcgtgcgat tgccaacggt tgcgacaacg gctttaccaa
     1981 gctgattttc gatgccgaaa ccggccgcat catcggcggc ggcattgtcg gtccgaacgg
     2041 tggcgacatg atcggcgaag tctgccttgc catcgaaatg ggctgcgacg cggcagacat
     2101 cggcaaaacc atccacccgc acccgacctt gggcgaatcc atcggtatgg ctgcggaagt
     2161 ggctttgggt gtatgtaccg acctgcctcc tcaaaagaaa aaataaacct gatgctctaa
     2221 gcagccgata aggtttatcc gaacaaatgc cgtctgaacc cttcaggcgg catttttatt
     2281 tggctgtgtt ttaaccatct gtcaatttta actggttgca agggaaaaga cgattatttt
     2341 ccagttaggc agacacctac actattgaat accttgaagc taagcatgcc tatcaatact
     2401 atattaaaat acagcctttt atttttcctc catgctttcc aataacagat ttcaactgga
     2461 tttcaatagt tcccctatcc cgtccgaatt ccatatctaa acattggaag cgtgtcctga
     2521 tatcggatta gagacaatca attgtttttg aaacatgaaa atccatccta tttcgagacc
     2581 gacaaaaatg ccgtctgaac atttcagacg gcatttggca taaacggcat taatgcggct
     2641 ggccggaaac catatctccc tcgtcaaaat caggatcggg ttcattttgc agcgttttcc
     2701 cgtttaactt cagggcgttg tttttaaggg aaatgaccgt atcaatctga ttaccgtcta
     2761 aagtaagata tttttccctt gccatacttt ggaccgtact gtccaccatc aggcgcaatg
     2821 tttcattaat atcggcaatg cttgctctgg cttccgcctc atcttcggca tttacactga
     2881 aaatatttcc agcctgactt accgccaaat cttccaacat tttttgagga atactcattc
     2941 tgatgtttgc ctcggttttc tttaacatca gtcccaattg gttcaaatct tccttcttca
     3001 tgcctttaaa catgattttt ccgcccacat caatttttcc ctgaggcagg gtgaaacgga
     3061 aaattttgat atttagtacc gggtcatggg taaataatcc ggaagcatcg cctttgactg
     3121 ccgcaatcaa atcattgcgg atttgttcct cagtcatttt tttggcagaa atttgtgcaa
     3181 acttgcgttt caatacggtt aaggcagaag catcgaggtg ttcggcagcg atatggatgt
     3241 ccagcgggcc gtatttttca tcgccgtaca ccaacgtatc gaaacggaac cgcccttcgc
     3301 tgtcgataaa cgcgcccgat tccccggtct tggttgaaaa agccagcttg ccgacttcga
     3361 ttttggaagg tgcgatgctg ccgttgggat tgataaacgc gccgatctgc aaatcggtaa
     3421 cgaggttgac cagttcgttc aatttgacgt tgtaatcgac accctctttc cattcgagcg
     3481 aaaatttttc caaagtcaga ttgctgctgc ccaaagcaag cggattgatg ccgtctgaag
     3541 tttccgaatc gaaatgcgct ttttcaaacg cggcatcgcc tttgtctgcc agcttgattt
     3601 tgaacaaggg cgcatcatag ctgttgcggt agcttttgaa acctttttga taaaccgttt
     3661 cccccgtcag gccttcccag tgcagcctga tgcccgacag ttcttcataa tcgaaagcgg
     3721 gaacactgac ttccatttta ccgctgccgt tgaaataaac ggtattggca agggaaaccg
     3781 gaacttgttt cccaaaaaag cgttccaaaa ctttttccgt ttcaggcgcg tatttgaact
     3841 cggtttcaat gtgcgcctgc gtgccgaatc cgccggcgaa agggccgtgc gtgatatggt
     3901 ttaccagcgt aaccggctgt tccaacacta ttttcaagtt atccggcagg tatttctgcg
     3961 cattatgcag caactcgggt ttcagacgga tgaccgtcgt ttccgtagag gtaaaccagc
     4021 ctcgatcata ctggtgcgat tcgacggtca aaaagcccgt tttctgcaat attttttgct
     4081 gctgcgtcag actttcttct gctttgacac ccaaataata aggtgtaccc aaagcaacgc
     4141 cgagcaatac tgccgcaact gaaatcaaag gttttttcat cacttcaaac aagcaggttt
     4201 caaaagtact agaatagcat tatttaagca tatcccgcca tatttcttta aaagaaatgc
     4261 cgtctgaaac ctgttcggac ggcattttcg gaaacggagg cagcttagaa atccaattcc
     4321 gccttcagcc agtaagtacg cggcagaccg acgacggcga aactacggtc aaattgtccg
     4381 cgctgtacct gccagtagtt tttgttgaac aggttttcta ccgagctgct gacggtcagg
     4441 gtgtttttgc ccagcttggt tttgtagcgc gcctacgtca accaaggtat aggacgggaa
     4501 ggcgtattgt ttttgcgtgt cttgataaga cttgccgaaa tacgaaacat tgccgttcaa
     4561 gctcaaacct ttggcaaacg gtgtatcccg ttcaacgcct gttttgacaa tcacgcgcgg
     4621 gttggcgact tgtacgccgt taaccagcat atcgcgcgca ttcggataat tcttcacgga
     4681 cgattgcaga tacatcacgc cgaaagtcgg gcgcagggtt ttgttcaaca ggttggcata
     4741 ggcattgaac tcaataccgc gattgcgttc cataccttgc tcgtcgccgg ctgcgcctcc
     4801 tgctgcttta tatgctgcaa aatcagtacc ttttttggta ttgccgcgcc agtagcccgg
     4861 gcgtttgatt tggaacgcgt tcaacgtggt tacaaaatcg ccccagtttt tacgcacgcc
     4921 gatttcaaac tggcggctga cgcgcggctt cgccattgtc gtttcgccgg aatcatcggt
     4981 tttgatatcg gcacgctcca agtcttccat atagttgccg cacacgacca aatcaggttg
     5041 cggcacccac gccgccatca gcatcgggct gaaacgtttg gcatcgccgc tctgtgattt
     5101 cttcttatca gtgtattcaa ccgcttggaa acgtccgccc aaagtcagag ggtatttgtt
     5161 atcaacgaat cccaaagtat cggacaaagc caagctgttg actttgatat tggcatccaa
     5221 gttggccgag ttcgcccaag aattgggata gtcggctttg aacgatgcca attgattcgc
     5281 aatattttcg tttgccttca cttctatctt gctgttgccg ttcccgctgc cgtttatggt
     5341 tttccgctgg cggataacgc ggtcgaaagc cgtactccag ttatgcgtga ccgggccggt
     5401 ttcaaattcg ccgcgtgcgg tcaggttcat actcaaagta cggaaatatt ggtcggtcag
     5461 gcgcgccgtg ccggtgtggt attggttggc agccatgcag gttttggttt ggctgctcgc
     5521 accgcttgta ccgcaaacgg ttggggaaat cagcgtaccg taataacgcg ctttgttgta
     5581 gccgataccg ccggtaattt aggtattgtc aaacgcatcc cattcaaacg tcagcatatt
     5641 ggtttcgccg acggtatttt gccagttcca agaaggcagc aggttgattt tgccgtcggg
     5701 cgcgtcgaac aagcgtccgc cggcgttttg gatatccttc atacgcgcgc ggccgccgtt
     5761 gattttgcgt ttcgcgtaga tggagtcgaa cgtcacgcgc agtttttcgc cgcgataatc
     5821 ggcatttaag gcaaattctt tgttgtcttc tctgtaaccg tggcgcgggg tgtcgccgtg
     5881 gcgcagtttg ccgttggcac gcacgccgaa tgctttgttt tcgccgaagc gttgccctaa
     5941 gtcgaaccta ccttgggcgc ggttgttgcc gaaccgggcc aaaccgattt tgcggttgcc
     6001 ttcgtcggcg gcttttttgg tttcgatgtt gacggaaccg gataccgcgc cttcagggta
     6061 tgccgtttac ggcggtggac gcgcctttaa tcagttgtgc gaagccgact tgcacgctcg
     6121 ccgtgccttg cgtgccatac attcctgcca agccgtttac gctgaattgg cgcgcatcaa
     6181 gctgataacc acggaaatac agaccggtca gcgtgttgct ttcgccgcca aactctcaaa
     6241 cggaagcgtc ttttttggct acggcatcca ctaaagtacg cgcctcggta ttgttgaagg
     6301 cttgttcgtc gtagttgacg acggtaatcg gcgcggtaaa cgcgttggct ttacccaata
     6361 cgcccaaatt tacgcggtcg cgcaagtcgc catcgctggc gatggagtaa gaatgcgcgg
     6421 ctttgacgcg cttggcatcg gcgcggacat gaacctgtcc gagttcgcca tgctgcggag
     6481 tattgtcggc ggcagatgaa aacgcgctca aaatcaacag cggcattaag gcaagttttt
     6541 tgttcatgaa aacgctctct tttttaagta ttggggaatt aaagataaaa caaacaaact
     6601 tatcggatat ttcgggcggc aattatattt gataatcaca actattaccg aaaaacttaa
     6661 tcaggcggag ctatccgact gttaaatatt ggtttatttt tg
//
LOCUS       DAXFZM010000099         6623 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.099, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000099 DAXFZM010000000
VERSION     DAXFZM010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6623)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6623)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6623
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.099"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            125..1344
                     /locus_tag="ACFJAG_001869"
                     /pseudo
     CDS             125..1344
                     /locus_tag="ACFJAG_001869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581011.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase"
     gene            complement(1404..2210)
                     /locus_tag="ACFJAG_001870"
     CDS             complement(1404..2210)
                     /locus_tag="ACFJAG_001870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4198 domain-containing protein"
                     /protein_id="HFC3981096.1"
                     /translation="MKKTLTLLAVSALFATSAHPHRVWVETAHTHGGEYLKADLGYGE
                     FPELEPIAKDRLHIFSKPMQLVTEKGKENMIQRGTYNYQYRSNRPVKDGSYLVTAEYQ
                     PTFRSKNKAGWKQAGIKEMPDASYCEQTRMFGKNIVNVGHESADTAIITKPVGQNLEI
                     VPLDNPANIHVGERFKVRVLFRGEPLPNATVTATFDGFDTSDRSKTHKTEAQAFSDTT
                     DGKGEVDIIPLHQGFWKASVEYKADFPDQSLCQKQANYTTLTFQIGHSHH"
     gene            2402..2611
                     /locus_tag="ACFJAG_001871"
     CDS             2402..2611
                     /locus_tag="ACFJAG_001871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalocrotonate tautomerase family protein"
                     /protein_id="HFC3981097.1"
                     /translation="MPYVNIKVTGGKEAPTAAQKAELIGGVIELLARVLGKNPETTVV
                     VIDEVDTDNWDIGGKSVSERRKEGR"
     gene            2700..3914
                     /locus_tag="ACFJAG_001872"
     CDS             2700..3914
                     /locus_tag="ACFJAG_001872"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HFC3981098.1"
                     /translation="MDKFPKSAKLDHVCYDIRGPVHKKALQLEEEGNKILKLNIGNPA
                     PFGFEAPDEILVDVIRNLPTSQGYCDSKGLYSARKAIVHYYQNKGLRDITVNDVYIGN
                     GVSELIAMSMQALLNDGDEILIPAPDYPLWTAAATLAGGTVRHYLCDEENGWFPNLAD
                     MEAKITSKTKAIVVINPNNPTGAVYSKEILLEIAELARKHGLIIFADEIYDKILYDGA
                     VHYHIAALAPDLLTVTFNGLSKAYRVAGFRQGWMVLNGPKHHAKGYIEGLDMLSSMRL
                     CANTPMQHAIQTALGGYQSINEFILPGGRLLEQRNRAWELVNQIPGVSCVKPMGAMYM
                     FPKIDTEMYRIRDDMKFVYDLLVREKVLLVQGTGFNWIKPDHFRIVTLPYVHQIEEAM
                     GRLARFLQTYHQ"
     gene            complement(3986..6559)
                     /gene="clpB"
                     /locus_tag="ACFJAG_001873"
     CDS             complement(3986..6559)
                     /gene="clpB"
                     /locus_tag="ACFJAG_001873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA];
                     GO_process: GO:0042026 - protein refolding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HFC3981099.1"
                     /translation="MRYDKLTAKFQQALAEAQSLALAADSSYLEAGFVLKALLDDQNS
                     GAAALLAHAGVNVPQVKQRLQQHLNSLPKVSGQGGEILPSRELQAVLNLMDKAATKRG
                     DAYIASELFLLALVQQNDAAGKILKEAGATEQNINAAIDAVRGGQNVNDANAEDQRDA
                     LKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEG
                     LAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTLIF
                     IDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ
                     KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAID
                     LIDEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDDASKKRLELIDEEIDG
                     LQKEYADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARASELEYGELPK
                     LGAQLQAAESNPDGKKQNKLFRTEVGADEVAEIVSRMTGIPVSKMMEGERDKLLKMEE
                     VLHRRVVGQNEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFL
                     FDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPHSVILLDEVE
                     KAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAVKE
                     VVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSD
                     AALDIIAKAGFDPIYGARPLKRAIQSEIENPLAKALLAGNYAPESEIKVEADGDRLKF
                     A"
BASE COUNT         1466 a         1650 c         1797 g         1710 t
ORIGIN      
        1 tcatatatag attaataaaa tcgggcttat gtcgactaca tgctattacg ttttgtcggg
       61 aaattggtta tagtaatgag cgaaatgcac gcccctgaaa atctttttgc gaaaaggaag
      121 caaaatgtct gatgccgttg caaaagaaac cctcaatccg tttgaaatcg cgcgaaaaca
      181 ggtcaaaacc gcctgcgacc ggctgaaaac cgatccggcc gtttatgaaa tcctgaagag
      241 tccgacccgc gtgttggaag tcaaactcga cgacggcacg gtcaaaacct ttaccggtta
      301 ccgttcgcgt gcgttcccat cccggtgtga atctggacga agtcaaggca ctgtcgattt
      361 ggatgaccat caaatgctgc gttgcaggca ttccttacgg cggcggcaaa ggcggcgtta
      421 ccttggatcc gcgcgattat tccgaggcgg aactggaacg catcgcccgc gcttatgccg
      481 aagcgattgc cccgctgatc ggcgaaaaaa atcgatattc ccgcccccga tgtgaacacc
      541 aacggcaaaa ttatgtcgtg gatggtggat gcctatgaaa acgtggtgaa acattccgcg
      601 ccgggcgtat ttaccggcaa accggttgag ttcggcggct ctttggcgcg taccgaggct
      661 accggttacg gcgtgaacct cgccgccgtc caagctttgg aaaaactggg caaagatgtg
      721 aaaggcgcaa cctacgccat tcaaggtttc ggcaatgtgg gctaccacac cggctattac
      781 gcgcatcaat ccggcgcgaa agtcgttacc gtatctactg ttgacgttgc tatctacaat
      841 gaaaacggct tggatatgga agcgctgttt aaagagttcc aagaaaaagg cttcatcacc
      901 aacaaagccg gttacggcaa agaaattacc aacgccgaac ttttggcttt ggatatggac
      961 gtactcgccc cttgcgcatt ggaaaaccag ctgacttccg aaaacgccgg taaagtccgc
     1021 gcgaaaatcg tggttgaagg cgcaaacggc ccgactacgc ccgaagccga cgttatcctg
     1081 catcaaaacg gcgtattggt cgtgcccgat attttggcaa actgcggcgg cgtggtcgtt
     1141 tcctatttcg agtgggtgca aaacctgcaa ggctattatt gggagtttga cgaagttcag
     1201 gaaaaagaaa tcgtcgtcct gcgccgcgcg ttccgcgata tttggaactt ggcgcaagag
     1261 tatgatgtcg atttgcgtac cgcgtcttat atgatgagta tccgccgtgt tgaaaaagcg
     1321 atgaagctgc gcggctggta ttgatgtttg aacaaaggat gccgtctgaa accatttcag
     1381 acggcatttt tgtttggacg gaattaatgg tgagaatggc cgatttggaa ggttaaagtt
     1441 gtgtagttcg cctgtttttg gcacaggctt tgatcgggga aatcggcttt gtattcgaca
     1501 ctcgctttcc aaaagccttg gtgcaagggg atgatgtcca cttcgccttt gccgtcggtg
     1561 gtgtcggaga aggcttgggc ttcggttttg tgcgttttgc tgcggtcgct ggtgtcgaag
     1621 ccgtcaaatg tagcggtaac ggtggcattg ggcagcggtt cgccacggaa cagaacgcgg
     1681 actttgaagc gttcgcctac gtgaatgttg gcgggattgt ccagcgggac gatttccaag
     1741 ttttgtccga ccggtttggt gatgatggcg gtgtccgcgc tttcgtgtcc cacgttgaca
     1801 atgtttttac cgaacatacg ggtttgttcg caatagcttg cgtcaggcat ttctttgatg
     1861 ccagcctgtt tccagcctgc tttgtttttt gaccggaaag taggctgata ttcggcggta
     1921 acgaggtagc tgccgtcttt gacgggacgg ttgctgcggt attggtagtt gtatgtgccg
     1981 cgttgaatca tgttttcctt acctttttcg gtaaccagct gcatcggttt gctgaagatg
     2041 tgcaggcggt ctttggcgat gggttcgagt tcggggaatt cgccgtagcc caagtcggct
     2101 ttaaggtatt cgccgccgtg cgtgtgggcg gtttcgaccc agacgcggtg ggggtgtgcg
     2161 gatgtggcaa atagtgcgga aacggcgagc agtgtcaatg ttttcttcat ggtgcagcct
     2221 ttatatcgtg cgggttaaaa attttgttat gctataacaa aatatgtatc gtgtgaagac
     2281 ggatttgccg cctgaaaact gtctttttgt atcgatttga atttttcaga aaatgaagcg
     2341 gacgtttggg cggaggcaac ttgtttgata agatagcaat atttcaaaac ggagaaatat
     2401 catgccttat gtcaatatta aagtaaccgg cggcaaggaa gcaccgactg ccgcgcaaaa
     2461 agcggaactg atcggcggcg taatcgaatt gctggcacgc gtgctgggta aaaatcccga
     2521 aacaacggtt gtcgtgattg acgaagtgga taccgataac tgggatatag gcggcaaaag
     2581 cgtcagcgaa cggcgcaaag agggcaggta aaaagcctga aaaccccgcc ctgatgcttt
     2641 aaatttcgcg tgaaaaagag tacattccca cccattgccc aaaatttacg gaacacatta
     2701 tggataaatt tcccaagtct gcaaagctcg accacgtctg ctacgacata cgcgggccgg
     2761 ttcacaaaaa agcccttcag ttggaagagg agggcaacaa aatcctcaag ctcaatatcg
     2821 gcaaccctgc gccgttcggc tttgaagcac ctgatgaaat cttagtcgat gtcatccgca
     2881 acctgccgac ttcgcaaggt tattgcgatt cgaaggggtt gtattccgca cgcaaagcca
     2941 ttgttcacta ctatcagaac aaaggtttgc gcgatattac ggtaaacgat gtctatatcg
     3001 gcaacggcgt gtccgagctg attgcgatgt ctatgcaggc gttgctcaac gacggcgacg
     3061 aaatcctgat tcccgcgccc gactaccctt tgtggacggc ggcggcaacg cttgcgggcg
     3121 gtacggtacg ccattatctg tgcgacgaag aaaacggctg gtttcccaac cttgccgata
     3181 tggaagccaa aatcacgtcc aaaaccaaag ccatcgtcgt catcaacccc aataacccga
     3241 caggagcggt gtacagcaag gaaatcctgc tggaaattgc cgaactggcg cgcaagcatg
     3301 gtttgattat tttcgccgac gagatttacg acaaaatcct ttatgatggc gcggttcact
     3361 accacatcgc cgcgctcgcc cccgaccttt tgacggtaac gttcaacggt ttgtccaaag
     3421 cctaccgtgt agccgggttc cgccaaggct ggatggtgct aaacgggccg aaacatcacg
     3481 caaaaggtta tatcgagggt ttggatatgc tctcgtccat gcgcttgtgt gccaatacgc
     3541 cgatgcagca cgcgattcag acggcattgg gcggttatca gagcattaac gaattcatct
     3601 tgcccggcgg acggcttttg gaacagcgca acagagcgtg ggaactggtc aaccagattc
     3661 ccggcgtgtc ctgcgtcaaa ccgatgggcg cgatgtatat gttcccgaaa atcgataccg
     3721 aaatgtaccg catccgcgat gatatgaaat tcgtttacga tttgctggtg cgcgaaaaag
     3781 tcctgctggt acagggaacg gggtttaatt ggatcaaacc cgaccatttc cgcattgtta
     3841 cgctgcctta cgtccatcag attgaagagg cgatgggcag gttggcaaga ttcctgcaaa
     3901 cctaccatca gtaggattct gataaaaaat gccgcctgga acggagattc ccgtttcaga
     3961 cggcattttc aacagcagga acaaatcagg caaatttcag tctgtcgccg tcggcttcta
     4021 ccttgatttc gctttcgggc gcatagtttc cggcaagcag ggctttggcc agcgggtttt
     4081 cgatttccga ttggatcgcg cgtttgagcg gacgtgcgcc gtaaatcggg tcgaaaccgg
     4141 ctttggcgat gatgtccaga gcggcatcgg aaacagtcag gcgcaggttt tgtttttcca
     4201 aacgtttttc caaacctttg agctggattt tcgcaatact gcggatattg gcctgatcca
     4261 agccatggaa cacgaccact tcgtcgatgc ggttgatcat ttccggacgg aaatgttctt
     4321 tcacatcctc catcacaact tctttcaccg cttcgtagtc ctgcgtgccc atttgttgga
     4381 tgtgctggct gccgatgttg gaagtcatca caatcacggt atttttaaaa tctaccgtcc
     4441 tgccttgtcc gtcggtcaaa cgaccgtcat ccaatacttg cagcaggatg ttgaatacgt
     4501 cgggatgggc tttttccact tcgtccaaaa gaatcacgct gtgcggtttg cggcggactt
     4561 gttcggtcag gtagccgccc tcttcgtatc cgacataacc cggaggcgcg ccgattaagc
     4621 gggcaacggc gtgtttttcc atgtattcgg acatgtcgat gcggatgagg tggtcttcgc
     4681 tgtcgaacag gaagcctgcc aaagctttgc acaactcggt cttacccaca ccggtcgggc
     4741 ctaagaacag gaagctgccg taaggtttgt tcggatcggc aaggccggag cggctgcggc
     4801 ggatggcatc ggacacggcg cgcacggctt cgttttgacc gactacgcgg cggtgcaaca
     4861 cttcttccat tttcaacaat ttatcgcgtt cgccttccat cattttggat acgggaatgc
     4921 cggtcatacg ggaaacgatt tcggccactt catccgcgcc gacttcggta cggaaaagtt
     4981 tgttttgttt tttgccgtcg gggttgcttt ccgctgcctg caattgtgcg cccaatttcg
     5041 gcaactcgcc gtattcgagt tcggacgcgc gggcgaagtc gccttgacgt ttggcttgtt
     5101 cgattttgac tttgatgtcg tccatttgtt tcttgatgtc ggcagtgctg gaagacgcgg
     5161 ctttttcggc tttccagatt tcgtccaaat cggcgtattc tttttgcagg ccgtcgattt
     5221 cttcgtctat cagttccaaa cgttttttgc tggcatcatc gctttctttg gcaacgtgca
     5281 ttttttccat tttcagctgg atgatgcggc ggtcgagttt gtccatctgt tcgggtttgc
     5341 tgtccagctc cattttgatg cggctggcgg cttcgtcaat caaatcaatc gccttgtcgg
     5401 gcaggaagcg gtcggtaatg tagcggtcgc tcaactccgc tgcggcaacg atagcagggt
     5461 cggtaatatc gatgccgtgg tggatttcgt aacgttcctg caaaccgcgc aggatagcga
     5521 tggtgtcttc cacgctgggt tcgccaacca atactttttg gaaacggcgt tcgagtgccg
     5581 cgtctttttc gatgtattgg cggtattcgt ccaaagtagt cgcaccgata cagtgcagtt
     5641 cgccccgcgc caaggccggt ttcaacatat tgcccgcgtc catcgcgccg tcggttttgc
     5701 ccgcgccgac caaagtatgg atttcatcga tgaaaatcag ggtgttgccg tcgtctttcg
     5761 ccaaatcgtt caatacgcct ttcaagcgtt cttcaaattc gccacggtat ttcgcaccgg
     5821 caatcaaagc cgccaaatcc aaaaccagca ggcgtttgtt acgcagggat tcaggtactt
     5881 cgccgttgac gatgcgttgc gccaaacctt cgacgatggc ggttttaccc acaccgggtt
     5941 cgccaatcag cacggggttg tttttggtgc ggcgttgcag cacctgaatc gcgcggcgga
     6001 tttcatcatc acgaccgata acggggtcga gcttaccgtc tcgggcgcgt tgggtcagat
     6061 cgagcgtgta ttttttcaaa gcatcgcgtt ggtcttcggc attcgcatcg ttcacgtttt
     6121 gtccgcctcg taccgcatcg atcgcggcat tgatattttg ttcggtcgca ccggcttctt
     6181 tcaagatttt gccggccgca tcgttctgct gcaccaaggc gagcaggaaa agttcgctgg
     6241 cgatataggc atcgccgcgt ttggttgccg ctttgtccat caggttcaac accgcctgca
     6301 attcgcggct gggcagaatc tcaccacctt gtccggacac tttcggcagg ctgttcaaat
     6361 gctgctgcaa acgctgttta acctgcggca cgttcacgcc cgcatgagcc aagagcgcgg
     6421 cagctccgct gttttggtcg tcaagcaggg ctttcagtac gaaacctgct tccagatagc
     6481 tgctgtccgc agccaacgcc aaactctgag cttctgcaag ggcttgttgg aatttggcgg
     6541 ttaatttgtc gtatcgcatt ttcgtttcct tttcaaaatg tccgctgtcg aagcctatat
     6601 gtgcatgact gtggataact caa
//
LOCUS       DAXFZM010000100         6396 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.100, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000100 DAXFZM010000000
VERSION     DAXFZM010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6396)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6396)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6396
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.100"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(848..1003)
                     /locus_tag="ACFJAG_001874"
     CDS             complement(848..1003)
                     /locus_tag="ACFJAG_001874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981100.1"
                     /translation="MPSESPSDGIGFPKHSAPFSSCRKQTPIRFAANAQKTQCRLKRQ
                     TGFRRHR"
     gene            complement(1020..2816)
                     /locus_tag="ACFJAG_001875"
     CDS             complement(1020..2816)
                     /locus_tag="ACFJAG_001875"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HFC3981101.1"
                     /translation="MNTVSNYLSALREAMKAQGLDALVIPSADPHLSEYLPEHWQARR
                     ELSGFTGSVGTFVVTADEAGVWVDSRYWEQAAKQLSGSGIELQKSGQVPPYNEWLAAN
                     LPENAAVGIPSDMVSLTGKRTLAQSLAAKNIRIQHPDDLLDQVWTSRPAIPAETVFIH
                     DHAYVSETAAEKLARVRAVMAEKGADYHLVSSLDDIAWLTNLRGSDVPFNPVFVSFLL
                     IGKDSAVLFTEQCRLNAEAAAALQTAGITVEPYAQVADKLAQIGGALLIEPNKTAVST
                     LVRLPESARLIEGINPSTFFKSVKSEADIASIREAMEQDGAALCGFFAEFEDIIGKGG
                     SLTEIDVDTMLYRHRSARPGFVSLSFDTIAGFNANGALPHYSATPESHSAISGNGLLL
                     IDSGAQYKGGTTDITRVVPVGTPTAEQKRDNTLVLKAHIALAEAVFPENIPSPLIDAI
                     CRKPLWQAQCDYGHGTGHGVGYFLNVHEGPQRIAFAAPATPETAMKKGMVTSIEPGLY
                     RPGKWGIRIENLAANQAVADPQETEFGSFLCFETLTLCPIDTRLMDTALMTDGEIEWV
                     NRYHAEVRRRLEPLTEGAAKAWLIKRTEPLAR"
     gene            3275..4528
                     /locus_tag="ACFJAG_001876"
     CDS             3275..4528
                     /locus_tag="ACFJAG_001876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0046873 - metal ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NRAMP family divalent metal transporter"
                     /protein_id="HFC3981102.1"
                     /translation="MSEQHISTWKSKINALGPGIMMASAAVGGSHLIASTQAGALYGW
                     QLALIIILTNLFKYPFFRFSAHYTLDTGKSLIEGYAEKSCVYLWVFLILCIASATINA
                     GAVAIVTAAIVKMAAPSLMFDAGTVAALIMASCLIIVVSGRYRALDRVSKIIIVTLSI
                     ATLAAAGIAMSRGMQMQPDFIEPTPWTLAGLGFLIALMGWMPAPIEISAINSLWVTEK
                     QRIRPSGYRDGIFDFNVGYIASAVLALVFLALGAFVQYGNGEAVQMAGGKYIGQLINM
                     YAVTIGGWSRPLVAFIAFACMYGTTITVVDGYARAIAEPVRLLRGREKPGNAELFAWN
                     IWVAGSGLAVIFWFDGVMANLLKFAMIAAFVSAPVFAWLNYRLVKGDKRHRLTAGMNA
                     LAIVGLLYLAGFAVLFLLNLTGLLA"
     gene            4683..6194
                     /gene="lysS"
                     /locus_tag="ACFJAG_001877"
     CDS             4683..6194
                     /gene="lysS"
                     /locus_tag="ACFJAG_001877"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009313040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004824 - lysine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006430 - lysyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HFC3981103.1"
                     /translation="MSEQNHPQTEPQLDENQIIALRREKLNNIRQQRNAYPNDFKRDS
                     FAADLQAQYGEIGKEELDPQAVPVKIAGRMMLKRQMGKASFATIQDVTGQIQLYLNNK
                     GVSQEVLDGFNHWDLGDIVGAEGTLFKTNHGELTVRVSDIRLLSKSLRPLPDKHKGLS
                     DQETKYRQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMMHPIPGGAT
                     AKPFVTHHNALDIPLYLRIAPELYLKRLVVGGLERVFEINRSFRNEGMSVRHNPEFTM
                     IEFYEAFSDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKK
                     YNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGSLQLALFEGCAEGKLWNPTFIVDY
                     PVEVSPLARASDTKQGLTERFELFVVGRELANGYSELNDPEDQAERFKSQVAQKDAGD
                     DEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTDLQTIRDVILFPQMRPE"
BASE COUNT         1379 a         1679 c         1854 g         1484 t
ORIGIN      
        1 gccgaaaggc ttgtatttag gcggttgagt tgttgggaaa ggttgccgca acttggagaa
       61 tgccctctcc ccggccctcc cccacggggg aggggcaggt tgcagcagat ttggcggttg
      121 caggcggttt gaaaaacaga ttggatttac aaccgttgat ttcaggtcgt ctgaaaagta
      181 aaaagcagcc tgcacaacct gattagttta caaaaccctt aaccccaaca gcctccccgt
      241 cctctctccc gtgggagagg gctggagaga gggcaacaag ccgcaaggct tgtattgggg
      301 cagttagggt gttgggaaag gttgccgcaa cttggagaat gccctctccc cagccctccc
      361 ccacggggga gggagtgggt ttcggcagat ttttcggttg caggcgattt gaaaggcaac
      421 ttagatttgc agctgttgtt tcaggtcgtc tgaaaagtaa aaacagcctg cacaacctat
      481 tttcttggaa tagcgcatta aaaagagtat gagaatggag acataaaaaa ttccggcgaa
      541 tgtccgtgcg ccgttcccgt ccgtcattcc cgcacaggcg ggaatccgga tttgtccgca
      601 cggaaactta tatttcgtca ttccaccaat cccgcccaca gcccactttt ccgcgtcatt
      661 cccgcgcagg cgggaatcca gtccgttcgg tttcggttat ttccgataaa ttcctgctgc
      721 ttttcattcc tagattccca ctttcgcggg aatgacggga tttcagggta aagatggcgg
      781 cagccggagg gctgtgaaga gctgttttcg caggaatgac gatatgcgga tttgctgttt
      841 tcatccgcta ccgatgccgt ctgaagcctg tttggcgttt cagacggcat tgggtttttt
      901 gtgcatttgc cgcaaaacgg atcggtgtct gcttgcggca agatgaaaac ggcgcggaat
      961 gttttgggaa accaatgccg tctgaagggc tttcagacgg catttttgta ccgtgccgtt
     1021 taacgcgcca gcggttcggt gcgtttaatc agccacgctt ttgccgcgcc ttcggtcagc
     1081 ggctcgaggc ggcggcggac ttcggcgtgg tagcggttga cccattcgat ttcgccgtcg
     1141 gtcatcaggg cggtgtccat caggcgtgta tcgatggggc agagggtcag ggtttcaaaa
     1201 cagaggaagc tgccgaactc ggtttcctgc gggtcggcga cggcttggtt ggcggcgagg
     1261 ttttcaatgc ggatgcccca tttccccggg cggtagaggc cgggttcgat ggaggtaacc
     1321 atgccttttt tcatggcggt ttcgggcgtg gcgggggcgg cgaaggcgat gcgctgcggg
     1381 ccttcgtgga cgttgaggaa atagcctacg ccgtggccgg tgccgtgtcc gtagtcgcat
     1441 tgcgcctgcc acaggggttt gcggcaaatc gcgtcaatta gcggcgaggg gatgttttcg
     1501 gggaacacgg cttcggcaag cgcgatatgg gctttgagaa cgagcgtgtt gtcgcgtttt
     1561 tgttctgctg tgggcgtgcc gacggggacg acgcgggtga tgtcggtcgt gccgcctttg
     1621 tattgcgcgc cggagtcgat gagcagcaga ccgttgccgc tgatggcgct gtggctttcg
     1681 ggtgttgcgc tgtaatgcgg cagggcgccg ttggcgttga agcctgcgat ggtgtcgaaa
     1741 ctcaaggaca caaaacccgg gcgcgcgctg cggtggcggt aaagcatcgt atccacgtcg
     1801 atttcggtca ggctgccgcc tttgccgatg atgtcttcaa actcggcgaa gaagccgcac
     1861 aacgccgcgc cgtcttgttc catcgcttcg cggatgctgg cgatgtcggc ttcggatttg
     1921 acggatttga agaaggtgga cgggttgatg ccttcaatca ggcgcgcgct ttcgggcagg
     1981 cgcacgagcg tactgacggc ggttttgttc ggctcgatga gcagcgcgcc gccgatttgc
     2041 gcgagtttgt cggcaacttg ggcgtaaggc tcgaccgtga tacctgcggt ttgcagcgcg
     2101 gcggcggctt cggcgttcag acggcattgt tcggtaaaca ggacggcact gtctttgccg
     2161 atcagcagga aggacacgaa aacagggttg aaaggcacgt cgctgccgcg caggttggtc
     2221 agccaagcga tgtcgtcaag cgaggaaacc aagtggtaat ccgcgccttt ttccgccata
     2281 actgcgcgca cgcgggcgag tttctcggcg gcggtttcgg agacgtaggc gtggtcgtgg
     2341 atgaacacgg tttcggcggg gatagcggga cggcttgtcc acacttggtc aagcaggtcg
     2401 tcggggtgtt ggatgcggat gtttttggcg gcgagcgatt gcgccaaagt gcgtttgccg
     2461 gtgagcgaca ccatatcgga agggatgccg acggcagcgt tttcgggcag gtttgccgcg
     2521 agccattcgt tgtacggcgg cacttgcccg cttttttgca gctcaatgcc gctgccggaa
     2581 agctgtttgg cggcttgttc ccaatagcgg ctgtccaccc atacgcccgc ttcatcggcg
     2641 gtaacgacga atgtgccgac cgagccggta aagcctgaca attcgcgccg cgcctgccaa
     2701 tgctcgggca ggtattcgga taggtggggg tcggcggaag ggatgacgag tgcgtccaag
     2761 ccttgcgcct tcatggcttc gcgcaatgcg gacaggtaat tcgatacggt attcataaca
     2821 gatcctccaa tcaggtttcg cggcttcaga cggcatggac ggaaatctga aatgccgtct
     2881 gaaaaacata accatattat caaatcgcca gcctgctgca aaacggacgg gctgatcgga
     2941 tggtgcgtgt ttgcacgaaa aaaagcgatg taaggttgtt tgttgtaaaa tttcaggcat
     3001 aaaatgtcgt ttcatgcctt cttttggaag taatacggaa aatatagtca ggtttcagca
     3061 tgaagttcta atagtgtgtg ttggcaggta tttggattac gttacaatac gcgctttcat
     3121 caaaatttcc ctaccgggcg gtatcctgtt tttgaagacg gtaggatttg ggtttgtttg
     3181 gggtcaatcc cgcccaaatt ggagcaatag atagggctgt gtccgaatat gcggctctgt
     3241 atgttgaaac acagttaaaa atacggaaga ctttatgtcc gaacaacata tttcgacttg
     3301 gaaaagcaag atcaacgcat tgggaccggg gattatgatg gcttcggcgg ctgtcggcgg
     3361 ttcgcacctg attgcctcga cgcaggcggg cgcgctttac ggctggcagc tcgcgctcat
     3421 catcatcctg accaacctct tcaaataccc gtttttccgc ttcagcgcgc attacactct
     3481 ggacacgggc aagagtctga ttgaaggtta tgccgagaaa agctgcgttt atttgtgggt
     3541 ttttttgatt ttgtgtatcg cctccgccac gattaacgcg ggcgcggtcg ccattgtaac
     3601 cgccgccatc gtcaaaatgg cggcaccctc gctgatgttt gatgccggca cggttgccgc
     3661 cttgattatg gcatcctgcc tgattattgt ggtaagcgga cgctatcgcg ctttggatcg
     3721 tgtttccaaa atcatcattg ttactttgag catcgccacg cttgccgccg ccggcatcgc
     3781 tatgtcgcgc ggtatgcaga tgcagcccga ttttatcgag ccgacaccgt ggacgcttgc
     3841 cggtttgggc ttcctgatcg cgctgatggg ctggatgccc gcgccgattg agatttccgc
     3901 catcaattct ttgtgggtaa ccgaaaaaca acgcatccgg ccttccggct accgcgacgg
     3961 cattttcgat ttcaacgtcg gttatatcgc cagtgcggtt ttggctttgg ttttccttgc
     4021 actgggcgcg tttgtgcaat acggcaacgg cgaagcagtg cagatggcgg gcggcaaata
     4081 tatcgggcaa ttgattaata tgtatgccgt aaccatcggc ggctggtcgc gcccgctggt
     4141 ggcgtttatc gcgtttgcct gtatgtacgg cacgacgatt accgttgtgg acggctacgc
     4201 ccgcgccatt gccgagcccg tgcgcctgct gcgcggcagg gaaaaacccg gcaacgccga
     4261 actctttgcc tggaatattt gggtggcggg cagcggtttg gcggtgattt tctggttcga
     4321 cggcgtaatg gcgaatctgc tcaaatttgc gatgattgcc gcctttgtgt ccgcccctgt
     4381 gttcgcctgg ctcaactacc gcctcgtcaa aggggacaaa cgccacaggc ttaccgccgg
     4441 tatgaacgcc cttgccattg tcggcctgct ctacctggcc gggtttgccg ttttgttcct
     4501 gctgaacctg acggggcttt tggcatagtt tccaaaacac ggatgccgtc tgcaagattt
     4561 tcagacggca tcgccctttc ttggaaaaaa acaccgacat cgcgtaaaat acgcgcaaat
     4621 tttgtgattc ggtcaggtcg tctgaaacag actgcgcctg atttattttt tcggaaaacc
     4681 ctatgagcga acaaaaccat ccgcaaaccg agccgcagtt ggacgaaaac caaatcatcg
     4741 ccctgcgccg cgaaaaactg aacaacatcc gccaacagcg caacgcttac cccaacgatt
     4801 tcaagcgcga cagctttgcc gccgatttgc aggcgcaata cggcgaaatc ggcaaagaag
     4861 aactcgaccc gcaggccgtt cccgttaaaa ttgccggccg catgatgctc aaacgtcaaa
     4921 tgggcaaagc cagcttcgcc accattcaag acgttaccgg tcaaatccag ctttatctga
     4981 acaacaaagg cgtgagccaa gaagttttgg acggcttcaa ccactgggac ttgggcgaca
     5041 tcgtcggtgc ggaaggcact ttgttcaaaa ccaaccacgg cgaactaacc gtgcgtgtgt
     5101 ccgacatccg cctgctgtcc aaatccctgc gtccgctgcc cgacaaacac aaaggcttga
     5161 gcgatcagga aaccaaatac cgccaacgct acgtcgattt gattgccaat gaagaatcgc
     5221 gcaatacctt tatcaaacgc agccaaatca tccaatctgt gcgtaatttt atggtgggcg
     5281 agcattatct cgaagtcgaa accccgatga tgcacccgat tcccggcggc gcgacagcga
     5341 aacccttcgt tacccaccac aatgccttgg acattccgct ctacctgcgc atcgcgcccg
     5401 agctgtatct gaaacgcttg gtggtcggcg gcttggaacg cgtgtttgaa atcaaccgca
     5461 gcttccgtaa cgagggcatg tccgtgcgcc acaaccccga atttacgatg attgaatttt
     5521 acgaagcctt ctccgactac gaacgtatga tgcagatggc ggaagacatc atccgcaacg
     5581 catcgcgcac ggtaaacggc acggcaaaca tcacttacaa cggcaaagaa gtcgatttgg
     5641 aaagcccgtt cgaacgtctg accatcctcg aagccatcaa aaaatacaat ccgcactaca
     5701 ccgacgagca gttgaacgat gcggaatggc tgaaaaaaga aatcgtcaaa cacggcgaaa
     5761 gcctgccgcc gtccccgggc atcggcagcc tgcaactcgc cctgtttgaa ggttgcgccg
     5821 agggcaaact gtggaatccg acctttattg tcgattaccc ggtcgaagtt tccccgttgg
     5881 cgcgcgcttc ggatacgaaa caaggtctga ccgaacgctt cgagcttttc gttgtcgggc
     5941 gcgaactggc aaacggctat tccgagttga acgaccccga agaccaagcc gaacgcttca
     6001 aatcgcaagt ggcgcaaaaa gatgcgggcg acgacgaagc catgcactac gatgccgact
     6061 acatccgcgc gatggaattc ggtttgccgc cgaccggcgg ttgcggcatc ggcatcgacc
     6121 gcttagtgat gctgctgacc gatttgcaaa ccatccgcga tgtgattctg tttccgcaga
     6181 tgcgtcccga gtaatcatat attcaattaa aaacaaaata gtacaacact cgacgttgaa
     6241 ggtttaacca tggcatactc tgcggactta agaaacaaag ctttaaacca tagcggatta
     6301 acaaaaatca ggacaaggcg gcgggccgca ggcagtacga atggtacgga accgatccgc
     6361 ccggcgctcc atcaccttag ggaatcgttc cctttg
//
LOCUS       DAXFZM010000101         6370 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.101, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000101 DAXFZM010000000
VERSION     DAXFZM010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6370)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6370)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6370
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.101"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..121
                     /locus_tag="ACFJAG_001878"
     CDS             <1..121
                     /locus_tag="ACFJAG_001878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003755953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HFC3981104.1"
                     /translation="SPEPNPIGKVWANIKRYLRTVLSDYARFDDALLSYFDFN"
     gene            complement(199..1437)
                     /locus_tag="ACFJAG_001879"
                     /pseudo
     CDS             complement(199..1437)
                     /locus_tag="ACFJAG_001879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003680490.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
     gene            complement(1617..2990)
                     /locus_tag="ACFJAG_001880"
     CDS             complement(1617..2990)
                     /locus_tag="ACFJAG_001880"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HFC3981105.1"
                     /translation="MSNPFSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLL
                     AAAQTGTGKTAAFMLPSLERLKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQGY
                     IKNLPLRHTVLFGGVNMDKQTADLRAGCEIVVATVGRLLDHVKQKNISLNKAEIVVLD
                     EADRMLDMGFIDDIRKIMQMLPRQRQTLLFSATFSAPIRKLAQDFMNAPETVEVAAQN
                     TTNANVEQHIIAVDTFQKRNLLERLIVDLHMNQVIVFCKTKQSVDRVTRELVRRNLSA
                     QAIHGDRSQQSRLETLNAFKDGSLRVLVATDIAARGLDIAELPFVINYEMPAQPEDYI
                     HRIGRTGRAGADGVAISLMDESEQKMFEAIKELTGNKLLIERIEGFEPRWWEQEGSKP
                     EKTETSEPRQRNRYESARAQREKNTRPETTANDAGAACGKIAGRSRRSRRGHRTCALL
                     QPRYGVK"
     gene            3204..4208
                     /gene="dusB"
                     /locus_tag="ACFJAG_001881"
     CDS             3204..4208
                     /gene="dusB"
                     /locus_tag="ACFJAG_001881"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003680069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HFC3981106.1"
                     /translation="MHIGGYFIDNPIALAPMAGITDKPFRRLCRAFGAGWAVCEMLAS
                     DPTLRNTGKTLHRSDFADEGGIVAVQIAGSDPEQMADAARYNVGLGAQVIDINMGCPA
                     KKVCNVQAGSALMQDEPLVAAILEAVVKAAGVPVTLKTRLGWHDDHQNLPAIAKIAED
                     CGIAALAVHGRARTQMYKGEARYELIAETKSRLNIPVWVNGDITSPQKAAAVLKQTAA
                     DGIMIGRGAQGRPWFFRDLKHYAEHGVLPPALSLAECRAAILNHIRAMHAFYGETVGV
                     RIARKHIGWYIGEMPDGEQARREINRLDNAAAQYDTLAGYLERLAGKTDRWACGYREG
                     "
     gene            4221..4370
                     /locus_tag="ACFJAG_001882"
     CDS             4221..4370
                     /locus_tag="ACFJAG_001882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981107.1"
                     /translation="MPPFGFGRHLSAWFGGRAESRPANVENNKCRLKTSGTGFAKRLS
                     DGIPS"
     gene            4397..4636
                     /locus_tag="ACFJAG_001883"
     CDS             4397..4636
                     /locus_tag="ACFJAG_001883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fis family transcriptional regulator"
                     /protein_id="HFC3981108.1"
                     /translation="MNPATADIAQCIEQNLNQYFKDLNGTEPCGVYDMVLHQVEKPLL
                     VCVMEQCGGNQSKASVMLGLNRNTLRKKLIQHGLL"
     gene            4639..5175
                     /gene="ruvC"
                     /locus_tag="ACFJAG_001884"
     CDS             4639..5175
                     /gene="ruvC"
                     /locus_tag="ACFJAG_001884"
                     /EC_number="3.1.21.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008821 - crossover junction DNA
                     endonuclease activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HFC3981109.1"
                     /translation="MSATVRILGIDPGSRVTGFGIIDVRGRDHFYVASGCIKTPADEP
                     LADRIAVIVRHIGEVVAVYKPQQAAVEQVFVNVNPASTLMLGQARGAALAALVSHKLP
                     VSEYTALQVKQAVVGKGKAAKEQVQHMVVQMLGLSGTPQADAADGLAVALTHALRNHG
                     LAAKLNPSGMQVKRGRFQ"
     gene            5226..6095
                     /locus_tag="ACFJAG_001885"
     CDS             5226..6095
                     /locus_tag="ACFJAG_001885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A biosynthesis lauroyl acyltransferase"
                     /protein_id="HFC3981110.1"
                     /translation="MKFIFFVLYVLQFLPFALLHKIAGLIGSLAYLLVKPRRRIGEIN
                     LAKCFPEWDEEKRKTVLKQHFKHMAKLMLEYGLYWYAPAKCLKSLVRYRNKHYLDDAL
                     AAGEKVIILYPHFTAFEMAVYALNQDVPLISMYSHQKNKILDEQILKGRNRYHNVFLI
                     GRTEGLRALVKQFRKSSAPFLYLPDQDFGRNNSVFVDFFGIQTATITGLSRIAALANA
                     KVIPAIPVREADNTVTLQFYPAWKSFPSEDAQADAQRMNRFIEERVREHPEQYFWLHK
                     RFKTRPEGSPDFY"
BASE COUNT         1387 a         1632 c         1880 g         1471 t
ORIGIN      
        1 ttcgcccgag cccaacccga ttgggaaagt gtgggcgaat attaagcggt atctgcgaac
       61 cgttttgtct gattacgccc gatttgacga tgcactactg tcctattttg attttaattg
      121 actatatttg tgtgaatggt gaaataaaaa tgccgtctga acccgattgg attcagacgg
      181 cattttgtat ggcaggattt attcgctttc caactgaccg acccattctg acaaggcagt
      241 caggcgttgt tcggatttcg ccacgaacgg gttttcggta tcccacgcgt agcctgccaa
      301 aatcgaagaa agcatacggc tgatttccgg gctgcggtcg ggcgcgtaca cgacgttttg
      361 gaagcggaaa tcataccagc cgtccacata ggtgcggaac gcgtctacgc cgatcatcag
      421 gggttcggca aattcggttt gccaatcggc ggcttcgcct ttgagttgtt ttgtcagcag
      481 atcggcagca agttcggcgg agtgcagcgc gatggttacg cccgacgaga acacggggtc
      541 gaggaactcg gcggcattgc ccaacagcgc gaaatgcctg ccgtgcagtg atttgacgtt
      601 ggcggaatag ccttggatgg agcggaacgg aaaatcgttt tcccaaacgg ctttgtccaa
      661 aatttcgctt aacatcgggc attcgtaaac aaattttttc aacaccgttt ccgattcgcc
      721 ggcaagtttg tcgggtgtgc cgaccacgcc gacggaacag cggttgtcgc cgaagggaat
      781 cagccaaatc cacacgtcgc ggttgttgcg gatgggtggt aatcaggatt ttgttgcggt
      841 cgaatttcgg gtgggtaatg ttgtcgtcga tgtgcgtgaa atgcgtttgg cgcggcggca
      901 ggtgcgaggg cgtttccaag tttagcaggc gcggcagcac gcgtccgtag ccgcttgcgt
      961 ccaagacgaa tttcgcggtc agttcatagc tctcgccggt gtcggtttcg atgttcaagc
     1021 gggcaaaatc gccgctgttg tcgaacgcgg ttacgccgtg cccgaaacgt acttcaacgc
     1081 cttgtttggc ggcttcttca atcaggattt tgtcgaacac ggcgcggcgg acttggtaaa
     1141 ccgtgccggg gccgtctgaa aatttatcgg tgaaatcaaa ctcggtatag cggctgcccc
     1201 acgaaaacgc cgcaccgttt ttcaactgaa agccgggccc ggtgcgaacg gcatcggcaa
     1261 aaccggcttc ttccagcatt tccatacagt gcggcagcag gctttcgccg atgacgaagc
     1321 gcggaaagtg ctgttttcca acacgcagac ttgataacct tttttgcgga gcagggcgga
     1381 tgcggccgaa cctgccggac ctgcgccgat tacggcgaca tcgaattggg tggacattgg
     1441 gaaatcctga tggtttgagt ggaaaaggaa atgatattgt acaggcagca aatgccgtct
     1501 gaaactgttt gcggaagaaa tttatccggt gcgggcggtt gctcccaatg cgtcagtccg
     1561 gtttgaaaaa tgccgtctga aacgggaaat gttcagacgg catttgattt tcagggttat
     1621 tttacgccgt aacgcggttg gagcagggcg cacgtccggt gtccccggcg gcttcggcgg
     1681 ctgcgcccgg caatttttcc gcaggccgcg cccgcatcgt ttgccgtggt ttccggccgg
     1741 gtattttttt cgcgctgagc cctggcggat tcgtagcggt tgcgttgtct cggttcgctt
     1801 gtttcggttt tttccggttt tgagccttcc tgttcccacc atcggggctc gaagccttcg
     1861 atgcgttcga tgagcagctt gttgccggtc agttctttga tggcctcaaa cattttctgt
     1921 tcggattcgt ccatcaggga aatcgccacg ccgtccgcac cggcgcgccc cgtgcgtccg
     1981 atgcggtgga tgtagtcttc gggctgggcg ggcatttcgt aattgatgac gaagggcagt
     2041 tcggcgatgt ccagcccacg cgcggcgata tcggtggcga cgaggacgcg caggctgccg
     2101 tctttgaagg cgttgagtgt ttcgagcctg ctttgttggg aacggtcgcc gtgtatcgcc
     2161 tgtgcggaca ggttgcggcg caccagttcg cgcgttacgc ggtcgacgct ttgtttggtt
     2221 ttgcaaaaga cgataacttg gttcatatgc agatcgacaa tcagccgttc gagcaggttg
     2281 cgcttttgga aggtatcgac ggcgatgatg tgttgttcga cgttggcgtt ggtggtgttt
     2341 tgggcggcaa cctcgacggt ttcgggcgcg ttcatgaagt cttgcgccag tttgcgtatc
     2401 ggggcggaga aggtggcgga aaagagcagg gtttggcgtt ggcggggcag catctgcatg
     2461 attttgcgga tgtcgtcgat aaaccccata tccaacatgc ggtctgcttc gtccagaacg
     2521 acgatttcgg ctttgtttaa actgatgttt ttctgtttca catggtcgag cagccgtccg
     2581 acggtggcga cgactatttc gcagccggca cgcaggtcgg cggtttgttt gtccatgttg
     2641 acaccgccga agaggacggt atgccgcagc ggcaggtttt taatgtagcc ctgcacgttt
     2701 tggtcgattt ggtcggcaag ttcgcgcgtc ggggtcaaca cgagcatacg cacggggtgc
     2761 attgcaggcg aggtgctggc ggtggcgtaa cgtttgaggc gttccagact gggcagcata
     2821 aaggcagcgg ttttgcctgt gccggtttgc gcggcggcaa gcaggtcgtg tccggccagt
     2881 gctttgggaa tggccgcggc ttggatgggc gtcgggtttt cgtaaccttg cgcggtcagt
     2941 gcggaaacca gttccgtacc caaacctaaa gaggaaaatg gattactcat gattgtagtc
     3001 tttctttcag accttatgcc gtctgaagcg ggaaaccgat aggacgggga aataaactgc
     3061 ccgcctgtga acggcgggga cgggaatttg tgtgcggatt atgccataaa acggtgcccg
     3121 ccccaatcgc gggcgcgtcc gcagattgga aatcctgctt aaaaaatgta caatggcgca
     3181 cttttttgaa acgcgggccc attatgcaca tcggcggtta ttttatcgac aaccccatcg
     3241 cacttgcgcc gatggcgggc attaccgaca aacccttccg ccgcctctgt cgggcgtttg
     3301 gcgcaggttg ggcggtgtgc gaaatgctgg ccagcgatcc gacgctcagg aataccggaa
     3361 aaaccctgca ccgcagtgat tttgccgatg aaggcggcat cgttgccgtg cagattgccg
     3421 gcagcgaccc cgaacagatg gcggatgcgg cgcgttacaa cgtcggactc ggggcgcagg
     3481 tcatcgacat caatatgggc tgccccgcca agaaagtgtg caacgtccaa gccggtagcg
     3541 cgctgatgca ggacgagccg ctggttgccg ccattttgga ggcggtggtc aaggcggcgg
     3601 gcgtacccgt taccctcaaa acccgtttgg gttggcacga cgaccatcaa aacctgcccg
     3661 ccatcgccaa aatcgccgaa gattgcggca ttgccgccct tgccgtccac gggcgcgcgc
     3721 gcacgcaaat gtacaaaggc gaggcgcgtt acgaactcat cgccgagacc aaaagccgtc
     3781 tgaacatccc ggtctgggtc aacggcgaca tcacttcgcc gcaaaaagcc gccgccgtcc
     3841 tcaaacaaac cgccgccgac ggcatcatga tagggcgcgg cgcgcaaggc aggccgtggt
     3901 ttttccgcga tttgaagcat tatgccgaac acggcgtttt accgcctgcc ttgagtttgg
     3961 cagaatgcag agccgccatt ttgaaccaca tccgcgccat gcacgcgttt tatggtgaga
     4021 ccgtcggtgt gcgcatcgca cgcaaacaca taggctggta catcggcgaa atgcccgacg
     4081 gcgaacaggc gcggcgtgaa atcaaccgct tggacaatgc ggcggcgcaa tacgacacac
     4141 ttgccggtta tcttgaaagg cttgccggaa aaaccgaccg ttgggcgtgc ggctatcggg
     4201 aagggtaggg cagtattgcc atgccgccgt tcgggttcgg acggcatctg tctgcatggt
     4261 tcggaggtcg ggcggaatcc cggccggcga atgtcgaaaa caataaatgc cgtctgaaaa
     4321 cgagtggaac gggtttcgcc aaaaggcttt cagacggcat tccgtcttaa aaacatttca
     4381 atcaaaagga tatgcgatga accctgcgac tgcggacatt gcgcaatgta tcgagcagaa
     4441 cttgaaccaa tatttcaaag acctgaacgg caccgaacct tgcggcgtgt acgatatggt
     4501 actgcatcag gtggaaaagc cgctgctggt gtgcgtgatg gagcaatgcg gcggcaacca
     4561 gtccaaagcc tccgtgatgc tgggactgaa ccgcaatacc ttgcgtaaga aactgattca
     4621 acacggtttg ctgtgaatat gtcggcaacc gtccgtatct tgggcatcga cccgggcagc
     4681 cgcgtaacgg gtttcggcat catcgatgtc agggggcgcg atcattttta cgtcgcctcc
     4741 ggctgcatca aaacgcctgc cgatgagcct ctggcagaca ggattgccgt gattgtgcgg
     4801 catatcggcg aagtcgttgc cgtttacaag ccgcaacagg cggcggtgga acaggtgttc
     4861 gtcaacgtca atccggcatc gacgctgatg ctcggtcagg cgcgcggagc ggcattggcg
     4921 gctttggtca gccataagct gcccgtttcg gaatacaccg ccttgcaggt caaacaggcg
     4981 gtggtcggca aaggcaaggc ggcgaaagaa caggtgcagc atatggtggt gcaaatgctg
     5041 ggactttcgg gaacgccgca ggcggatgcg gcggacggtc ttgccgtcgc gctgacccac
     5101 gccttacgca accacgggct tgccgccaaa ctcaatcctt cggggatgca ggtcaagcgc
     5161 ggaaggtttc aatagtttca gacggcattt gtattttgcc gcctgaaaag aaaatgtgta
     5221 ccgagatgaa atttatattt tttgtactgt atgttttgca gtttctgccg tttgcgctgc
     5281 tgcacaagat tgccggcctg atcggttcgc ttgcctacct tctggtcaaa ccgcgccgcc
     5341 gtatcggcga aatcaatttg gcaaaatgtt ttcccgaatg ggacgaagaa aagcgtaaaa
     5401 ccgtgttgaa acagcatttc aaacacatgg caaaactgat gctcgaatac ggcttatatt
     5461 ggtacgcgcc tgccaaatgc ctgaaatcgc tggtgcgcta ccgcaataag cattatttgg
     5521 acgacgcgct ggcggcgggg gaaaaagtca tcatcctgta cccgcacttt accgcgttcg
     5581 agatggcggt gtacgcgctt aatcaggatg tcccgctgat cagtatgtat tcccaccaaa
     5641 aaaacaagat attggacgaa cagattttga aaggccgcaa ccgctatcac aacgtcttcc
     5701 ttatcgggcg caccgaaggg ctgcgcgccc tcgtcaaaca gttccgcaaa agcagtgcgc
     5761 cgttcctgta tctgcccgat caggatttcg gacgcaacaa ttcggttttt gtggattttt
     5821 tcggcattca gacggcaacg attaccggct tgagccgcat tgccgcgctt gcaaatgcaa
     5881 aagtgatacc cgccattccc gtccgcgagg cggacaatac ggttacattg caattctatc
     5941 ccgcttggaa atcctttccg agtgaagacg cgcaagccga cgcgcaacgt atgaaccgct
     6001 ttatcgaaga acgcgtgcgc gaacacccgg aacaatattt ctggctgcac aagcgtttca
     6061 aaacccgtcc ggaaggcagc cccgattttt actgactaca taaaattaca aaacaaatca
     6121 ggcgtttcag atcaaaaacc ccgattgttt ttgggaattt gaaacccggg ttgtacaaac
     6181 aggatttgcc ggacggtttt aacggttcag ttgtttgtaa aaacaatgct tttttaaaat
     6241 tgacaaaaaa cgaaatcggt tttaaaggct tattccgaga acaaagggga gtggatgccg
     6301 aaaacccggt taatatatta tagtggatta acaaaaacca atacggcgtt gcttcgcctt
     6361 agctcaaaga
//
LOCUS       DAXFZM010000102         5854 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.102, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000102 DAXFZM010000000
VERSION     DAXFZM010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5854)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5854)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5854
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.102"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            1..1535
                     /locus_tag="ACFJAG_001886"
     rRNA            1..1535
                     /locus_tag="ACFJAG_001886"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
     gene            1636..1712
                     /locus_tag="ACFJAG_001887"
     tRNA            1636..1712
                     /locus_tag="ACFJAG_001887"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1670..1672,aa:Ile,seq:gat)
     gene            1718..1793
                     /locus_tag="ACFJAG_001888"
     tRNA            1718..1793
                     /locus_tag="ACFJAG_001888"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1751..1753,aa:Ala,seq:tgc)
     gene            2140..5031
                     /locus_tag="ACFJAG_001889"
     rRNA            2140..5031
                     /locus_tag="ACFJAG_001889"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
     gene            5128..5241
                     /gene="rrf"
                     /locus_tag="ACFJAG_001890"
     rRNA            5128..5241
                     /gene="rrf"
                     /locus_tag="ACFJAG_001890"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
     gene            5277..5396
                     /locus_tag="ACFJAG_001891"
                     /pseudo
     CDS             5277..5396
                     /locus_tag="ACFJAG_001891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798959.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="competence protein ComE"
     gene            5498..>5854
                     /locus_tag="ACFJAG_001892"
     CDS             5498..>5854
                     /locus_tag="ACFJAG_001892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HFC3981111.1"
                     /translation="MSRGGATPYRFLLIRHIVARCGLLFATLKGKTMKKMFVLFCMLF
                     SCAFSLAAVNINAASQQELEALPGIGPAKAKAIAEYRAQNGAFKSVDDLIKVKGIGPA
                     VLAKLKDQASVGAPAPK"
BASE COUNT         1555 a         1285 c         1760 g         1254 t
ORIGIN      
        1 aagagtttga tcctggctca gattgaacgc tggcggcatg ctttacacat gcaagtcgga
       61 cggcagcaca gggaagcttg cttctcgggt ggcgagtggc gaacgggtga gtaacatatc
      121 ggaacgtacc gggtagcggg ggataactga tcgaaagatc agctaatacc gcatacgtct
      181 tgagagggaa agcaggggac cttcgggcct tgcgctatcc gagcggccga tatctgatta
      241 gctggttggc ggggtaaagg cccaccaagg cgacgatcag tagcgggtct gagaggatga
      301 tccgccacac tgggactgag acacggccca gactcctacg ggaggcagca gtggggaatt
      361 ttggacaatg ggcgcaagcc tgatccagcc atgccgcgtg tctgaagaag gccttcgggt
      421 tgtaaaggac ttttgtcagg gaagaaaagg ccgttgccaa tatcggcggc cgatgacggt
      481 acctgaagaa taagcaccgg ctaactacgt gccagcagcc gcggtaatac gtagggtgcg
      541 agcgttaatc ggaattactg ggcgtaaagc gggcgcagac ggttacttaa gcaggatgtg
      601 aaatccccgg gctcaacccg ggaactgcgt tctgaactgg gtgactcgag tgtgtcagag
      661 ggaggtggaa ttccacgtgt agcagtgaaa tgcgtagaga tgtggaggaa taccgatggc
      721 gaaggcagcc tcctgggata acactgacgt tcatgtccga aagcgtgggt agcaaacagg
      781 attagatacc ctggtagtcc acgccctaaa cgatgtcaat tagctgttgg gcaacttgat
      841 tgcttggtag cgtagctaac gcgtgaaatt gaccgcctgg ggagtacggt cgcaagatta
      901 aaactcaaag gaattgacgg ggacccgcac aagcggtgga tgatgtggat taattcgatg
      961 caacgcgaag aaccttacct ggttttgaca tgtgcggaat cctccggaga cggaggagtg
     1021 ccttcgggag ccgtaacaca ggtgctgcat ggctgtcgtc agctcgtgtc gtgagatgtt
     1081 gggttaagtc ccgcaacgag cgcaaccctt gtcattagtt gccatcattc ggttgggcac
     1141 tctaatgaga ctgccggtga caagccggag gaaggtgggg atgacgtcaa gtcctcatgg
     1201 cccttatgac cagggcttca cacgtcatac aatggtcggt acagagggta gccaagccgc
     1261 gaggcggagc caatctcaca aaaccgatcg tagtccggat tgcactctgc aactcgagtg
     1321 catgaagtcg gaatcgctag taatcgcagg tcagcatact gcggtgaata cgttcccggg
     1381 tcttgtacac accgcccgtc acaccatggg agtgggggat accagaagta ggtagggtaa
     1441 ccgcaaggag tccgcttacc acggtatgct tcatgactgg ggtgaagtcg taacaaggta
     1501 gccgtagggg aacctgcggc tggatcacct cctttctaga gaaagaaggg gctttaggca
     1561 ttcacactta tcggtaaact gaaaagatgc ggaagaagct tgagtgaagg caaggttcgc
     1621 ttaagaaggg aaaccgggtt tgtagctcag ctggttagag cacacgcttg ataagcgtgg
     1681 ggtcggaggt tcaagtcctc ccagacccac caagaacggg ggcatagctc agttggtaga
     1741 gcacctgctt tgcaagcagg gggtcatcgg ttcgatcccg tttgcctcca ccaaaacttt
     1801 acaaatgaaa gcaagtttgc tgtttttagc agcttatttt gatttgcgaa gtagaataac
     1861 gacgcatcga tctttaacaa attggaaagc cgaaatcaac aaacaaagac aatgagtttg
     1921 ttttgatttt ttattctttg caaaggataa aaacctctcg caagagaaaa gaaaacaaac
     1981 atagtatttg ggtgatgatt gtatcgactt aatcctgaaa cacaaaaggc aggattaaga
     2041 cacaacaaag cagtaagctt tatcaaagta gggatttcaa gtttgcttac ttagtcaacg
     2101 ggtaggtaaa cgaagtcaaa gaagttcttg aaatgataga gtcaagtgaa taagtgcatc
     2161 aggcggatgc cttggcgatg ataggcgacg aaggacgtgt aagcctgcga aaagcgcggg
     2221 ggagctggca ataaagctat gattccgcga tgtccgaatg gggaaaccca ctgcattctg
     2281 tgcagtatcc taagttgaat acataggctt agagaagcga acccggagaa ctgaaccatc
     2341 taagtacccg gaggaaaaga aatcaaccga gattccgcaa gtagtggcga gcgaacgcgg
     2401 aggagcctgt acgtaataac tgtcgagata gaagaacaag ctgggaagct tgaccatagc
     2461 gggtgacagt cccgtattcg aaatctcaac agcggtacta agcgtacgaa aagtagggcg
     2521 ggacacgtga aatcctgtct gaatatgggg ggaccatcct ccaaggctaa atactcatca
     2581 tcgaccgata gtgaaccagt accgtgaggg aaaggcgaaa agaaccccgg gaggggagtg
     2641 aaacagaacc tgaaacctga tgcatacaaa cagtgggagc gccctagtgg tgtgactgcg
     2701 taccttttgt ataatgggtc aacgacttac attcagtagc gagcttaacc ggatagggga
     2761 ggcgtaggga aaccgagtct taatagggcg atgagttgct gggtgtagac ccgaaaccga
     2821 gtgatctatc catggtcagg ttgaaggtgc cgtaacaggt actggaggac cgaacccacg
     2881 catgttgcaa aatgcgggga tgagctgtgg gtaggggtga aaggctaaac aaactcggag
     2941 atagctggtt ctccccgaaa actatttagg tagtgcctcg agcaagacac tgatgggggt
     3001 aaagcactgt tatggctagg gggttattgc aacttaccaa cccatggcaa actcagaata
     3061 ccatcaagtg gttcctcggg agacagacag cgggtgctaa cgtccgttgt caagagggaa
     3121 acaacccaga ccgccggcta aggtcccaaa tgatagatta agtggtaaac gaagtgggaa
     3181 ggcacagaca gccaggatgt tggcttagaa gcagccatca tttaaagaaa gcgtaatagc
     3241 tcactggtcg agtcgtcctg cgcggaagat gtaacggggc tcaaatctat aaccgaagct
     3301 gcggatgccg gtttaccggc atggtagggg agcgttctgt aggctgatga aggtgcattg
     3361 taaagtgtgc tggaggtatc agaagtgcga atgttgacat gagtagcgat aaagcgggtg
     3421 aaaagcccgc tcgccgaaag cccaaggttt cctacgcaac gttcatcggc gtagggtaag
     3481 tcggccccta aggcgaggca gaaatgcgta gtcgatggga aacaggttaa tattcctgta
     3541 cttgattcaa atgcgatgtg gggacggaga aggttaggtt ggcaagctgt tggaatagct
     3601 tgtttaagcc ggtaggtgga agacttaggc aaatccgggt tttcttaaca ccgagaagtg
     3661 atgacgagtg tctacggaca cgaagcaacc gataccacgc ttccaggaaa agccactaag
     3721 cttcagtttg aatcgaaccg taccgcaaac cgacacaggt gggcaggatg agaattctaa
     3781 ggcgcttgag agaactcggg agaaggaact cggcaaattg ataccgtaac ttcgggagaa
     3841 ggtatgccct ctaaggttaa ggacttgctc cgtaagcccc ggagggtcgc agagaatagg
     3901 tggctgcgac tgtttattaa aaacacagca ctctgccaac acgaaagtgg acgtataggg
     3961 tgtgacgcct gcccggtgcc ggaaggttaa ttgaagatgt gcaagcatcg gatcgaagcc
     4021 ccggtaaacg gcggccgtaa ctataacggt cctaaggtag cgaaattcct tgtcgggtaa
     4081 gttccgaccc gcacgaatgg cgtaacgatg gccacactgt ctcctcccga gactcagcga
     4141 agttgaagtg gttgtgaaga tgcaatctac ccgctgctag acggaaagac cccgtgaacc
     4201 tttactgtag ctttgcattg gactttgaag tcacttgtgt aggataggtg ggaggcttgg
     4261 aagcagagac gccagtctct gtggagtcgt ccttgaaata ccaccctggt gtctttgagg
     4321 ttctaaccca gacccgtcat ccgggtcggg gaccgtgcat ggtaggcagt ttgactgggg
     4381 cggtctcctc ccaaagcgta acggaggagt tcgaaggtta cctaggtccg gtcggaaatc
     4441 ggactgatag tgcaatggca aaaggtagct taactgcgag accgacaagt cgggcaggtg
     4501 cgaaagcagg acatagtgat ccggtggttc tgtatggaag ggccatcgct caacggataa
     4561 aaggtactcc ggggataaca ggctgattcc gcccaagagt tcatatcgac ggcggagttt
     4621 ggcacctcga tgtcggctca tcacatcctg gggctgtagt cggtcccaag ggtatggctg
     4681 ttcgccattt aaagtggtac gtgagctggg tttaaaacgt cgtgagacag tttggtccct
     4741 atctgcagtg ggcgttggaa gtttgacggg ggctgctcct agtacgagag gaccggagtg
     4801 gacgaacctc tggtgtaccg gttgtaacgc cagttgcata gccgggtagc taagttcgga
     4861 agagataagc gctgaaagca tctaagcgcg aaactcgcct gaagatgaga cttcccttgc
     4921 ggtttaaccg cactaaaggg tcgttcgaga ccaggacgtt gataggtggg gtgtggaagc
     4981 gcggtaacgc gtgaagctaa cccatactaa ttgcccgtga ggcttgactc tatcatttga
     5041 aggacttcaa gagataaaag cttactgact gattcagtca ttaccgaata tattgattaa
     5101 ggctttaccg atttgcaaca gtttaagttt ggcggccata gcgagttggt cccacgcctt
     5161 cccatcccga acaggaccgt gaaacgactc agcgccgatg atagtgtggt tcttccatgc
     5221 gaaagtaggt cactgccaaa caccctttca gaaaaccccc ggatatccgg gggtttttgc
     5281 tttgcccgga aaaaatgtcg gggatggcgg gacggcatct gtacggtgtc cggtcgggtt
     5341 tgcggaggaa cggcttgaaa ctttgggata ttcattttag aatgacccgt tttatagcgg
     5401 attaacaaaa atcaggacaa ggcggcgggc cgcaggcagt acggatagta cggaaccggt
     5461 tcgcccggtg cttcatcacc ttagggaatc gttccctttg agccggggcg gggcaacgcc
     5521 gtaccggttt ttgttaatcc gccatatcgt cgcaagatgc ggtttgttgt ttgcaaccct
     5581 taaaggaaaa accatgaaaa aaatgtttgt attgttctgt atgctgttct cctgcgcctt
     5641 ctcccttgcg gcggtaaaca tcaatgcggc ttcgcagcag gagctggagg cgctgccggg
     5701 cataggcccg gcgaaggcga aggccattgc ggaataccgc gcgcaaaacg gcgcgttcaa
     5761 gtctgtggac gatttgatca aggtgaaggg catcggtccg gcggtgctgg cgaagctgaa
     5821 agaccaggct tccgtcggcg cgcccgcacc aaaa
//
LOCUS       DAXFZM010000103         5600 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.103, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000103 DAXFZM010000000
VERSION     DAXFZM010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5600)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5600)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5600
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.103"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(27..1013)
                     /locus_tag="ACFJAG_001893"
     CDS             complement(27..1013)
                     /locus_tag="ACFJAG_001893"
                     /inference="COORDINATES: protein motif:HMM:NF013235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation protein"
                     /protein_id="HFC3981112.1"
                     /translation="MPNDLVVVKANSLIEANYRLSIDEIRILALTIGTMDPKSNQKIF
                     DFTVADFVREFPEISQDNAYKQIQAAIKRIYDRSVKTEDKDRVTEFRWVSSRTYFKKE
                     GRFRIAMTDEVMPYLTQLKGQFTQYQLKHIAYFNSVHSIRIYELITQYRSVGSREITV
                     EKLKEWLQVENKYPRFNSLNQRVLEPAITEINEKSDLVVEVEQIKRGRTIHSLNFVIG
                     SKKRTAQKIEEVAKRPVFPHKNKYGKFVKLDKQNPKMSNHEYGLWARDCLKILEDHYT
                     DITKVTNEDLRNYWVFLAGNDSNRSKLGSKSDFLNELKKRGYKLVDCELVKI"
     gene            complement(1413..1670)
                     /locus_tag="ACFJAG_001894"
     CDS             complement(1413..1670)
                     /locus_tag="ACFJAG_001894"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981113.1"
                     /translation="MSEIVTIIFYNVLILSLIAISVYVYLKWQHKKRIDRMLDEMEKS
                     YSKFADHKANERMQKRIDEYDKRHPLKAFKRKFKDKIKWLL"
     gene            complement(1673..1969)
                     /locus_tag="ACFJAG_001895"
     CDS             complement(1673..1969)
                     /locus_tag="ACFJAG_001895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981114.1"
                     /translation="MASEKLTRLEQQQADLQRKQDEIKAKIRAIKSKEQAEKRKKATH
                     YKVLLGAFWLNEIINNPLLDVDRNFPKLRKFINDDKKFDELSAFINEEIEKGKK"
     gene            2138..3574
                     /locus_tag="ACFJAG_001896"
     CDS             2138..3574
                     /locus_tag="ACFJAG_001896"
                     /inference="COORDINATES: protein motif:HMM:NF015354.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MobA/MobL family protein"
                     /protein_id="HFC3981115.1"
                     /translation="MAIYHLNVRYCSKSKGQSAQAKNDYINRNDKYSKRLDDLQFSGY
                     GNMPKFAEDNPQEFWRLSDIYERANARVCTEIEFALPRELTLEQQQKLVSSFIENTVD
                     SGSNKLPYSFAIHTDKNNHNPHCHLIFSERQLDGIDRTAEQFFKRANTKSPEKGGAMK
                     TADFRDREFIQSVRKTWREQANQALEQYGYAARIDERSYKEQGIEQAPRARIDRVTWQ
                     ELNRLEQEERQIVQELALKGQEINKEKSYLQKIEEKQAQGMGKYESKFAAAFSKLSES
                     ALKHDLSNEKEKDSKIHTQEEKVPQNRIQGLSQADFDQFLIDEWLPQIEKYVKAQEKR
                     DGMEVEITQYDKDLQRIQGDYNKLTDKNQGFLGLWETKEQKAKKKELEDEYKHTAEQR
                     NAKSQELAEYSQKIKAYEQKTLEPINEKIAKYQADNPEIKMRSLGFVKKIKAQGAYKA
                     AQERMEREKQHQQEKQQRHLERESGLSL"
     gene            3815..4282
                     /locus_tag="ACFJAG_001897"
                     /pseudo
     CDS             3815..4282
                     /locus_tag="ACFJAG_001897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005687610.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
     gene            4465..5325
                     /locus_tag="ACFJAG_001898"
     CDS             4465..5325
                     /locus_tag="ACFJAG_001898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032489893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="broad-spectrum class A beta-lactamase TEM-1"
                     /protein_id="HFC3981116.1"
                     /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGY
                     IELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVE
                     YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRL
                     DRWEPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPL
                     LRSALPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIA
                     EIGASLIKHW"
     gene            complement(5420..>5600)
                     /locus_tag="ACFJAG_001899"
     CDS             complement(5420..>5600)
                     /locus_tag="ACFJAG_001899"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="antitoxin VbhA family protein"
                     /protein_id="HFC3981117.1"
                     /translation="KKNKMNSNFITETEKLSREKAVRAAIDNNRLEGLEPSQEFIDRG
                     LTLSGTKTHVKGFWS"
BASE COUNT         1748 a         1115 c         1107 g         1630 t
ORIGIN      
        1 aaaaaaaagt taagtaaaat acctacctaa atttttacta gttcgcaatc tacgagctta
       61 taacctcgtt ttttcaattc atttaaaaaa tcagattttg agcctaattt tgatctattg
      121 ctatcgttac ccgctagaaa tacccagtaa ttacgcaaat cttcattggt aactttcgta
      181 atatcggtgt aatgatcttc gagtattttt aagcaatctc tagcccataa accgtactcg
      241 tgattgctca tcttagggtt ttgcttatcg agtttgacga acttcccata cttgttttta
      301 tgtggaaata ctggccgttt tgcaacttct tcaatttttt gagctgttcg ttttttacta
      361 ccaatcacaa aatttaaaga gtgaatagta cgcccacgct tgatttgttc aacctcaacg
      421 actaaatcag atttctcgtt aatctcagtt attgcaggtt ccaaaacacg ttgatttaat
      481 gaattaaatc tagggtattt attttcaacc tgaagccatt cttttagttt ttctactgta
      541 atttcacgac taccaacaga gcgatattgt gtaattagct cataaattcg aattgaatgt
      601 acactgttga aataagcgat atgtttgagt tgatattgcg tgaattgccc tttaagttgc
      661 gttaggtatg gcataacttc atcagtcatt gcaattctaa aacgcccctc tttcttgaaa
      721 tatgttctag aggaaaccca acgaaattca gttacacggt ctttatcttc agttttaaca
      781 cttcggtcat aaatccgttt tatagccgcc tgaatttgct tataggcgtt atcttggctt
      841 atttctggaa actcacggac aaaatcagcc accgtaaaat caaaaatctt ttgattagat
      901 ttcggatcca tagtcccaat agttaaagct aaaattctga tttcatcaat actcaatcgg
      961 taattggctt caataaggct attagccttt acaacaacta aatcatttgg cataagacaa
     1021 caaatttcct gtttaaaaca acaagcaaaa tatacctgtt gtttatatat aaaacaacaa
     1081 gtattttctt aaaagttgtc tataacagga aatttgttgt cgtataacag gaaatttgtt
     1141 gtcttataac aggaaatttg ttgtcgtata acaggaaatt tgttgtcgta taagtttgta
     1201 acttattgat tttactggtt ttaaaaacgc cgaaaacaag taaaaaacaa aaatataaaa
     1261 atatagggac tttcgtccct tttttgggct ttcagcccta attttttctt ttttcaggat
     1321 taaaaattac aaaaccctta cagagcaagt aaacttgttt gcttgttctg caagggttca
     1381 gcaaccgtag ccgtcaggcg tagggcggta gcctataaaa gccatttaat tttatcttta
     1441 aacttccttt taaatgcttt gagtgggtgt cttttatcgt actcatcaat ccttttttgc
     1501 attctttcgt ttgctttgtg atcggcaaat tttgaataag atttttccat ctcatctaac
     1561 attctatcaa tccgtttttt atgttgccat ttcaggtaaa cataaacact tatagcaatt
     1621 aaagacaata tcaatacatt gtaaaaaatg attgttacaa tttcgctcac agttattttt
     1681 tacctttttc aatttcttca ttgataaatg cactcaattc atcaaatttc ttgtcatcat
     1741 tgataaattt acgcaactta gggaagtttc tatctacatc taaaagaggg ttatttatta
     1801 tttcatttag ccaaaaagcc cctaataaaa ccttgtaatg cgtagctttc ttacgctttt
     1861 ctgcttgttc ttttgactta atcgcacgaa ttttcgcttt gatttcgtcc tgcttgcgtt
     1921 gtaaatctgc ttgttgctgt tccaatcttg taagtttttc gcttgccata ctagccactt
     1981 tatatagtta gaaattatcg ttattttatt cagtaggtgc taggcttgca agtgttctgt
     2041 tcattacgtt aaaataacgt aatgcccact tatcagtttc tcttcgagaa actggtgggc
     2101 aagcgtaccg cttgaccgtt tcgcaatact caacactatg gcaatctatc atttaaacgt
     2161 tcgctattgc agtaaaagca aagggcaatc agctcaagcc aaaaacgact acatcaaccg
     2221 caatgataaa tattcaaagc ggttagatga tttacagttt tcaggctatg gtaatatgcc
     2281 aaaatttgcc gaagataatc cgcaagaatt ttggcgattg tcagatattt acgagcgagc
     2341 taatgcccga gtttgtactg aaattgaatt tgctttacct agagaattaa ccctagaaca
     2401 acagcaaaaa ttagtaagtt cgtttataga aaatacggtt gatagcggta gcaataaact
     2461 accctactct ttcgctatcc ataccgataa aaataatcat aatccccatt gtcatttgat
     2521 attttcagaa cgccaacttg acggcataga ccgtacagcc gagcagtttt ttaaacgtgc
     2581 taatactaaa tccccagaaa agggcggagc gatgaaaacg gcagattttc gagatcgtga
     2641 gtttatccaa tctgtccgaa aaacgtggag agagcaagct aatcaagcct tagagcaata
     2701 cggatatgcc gcacgaattg acgaacgtag ctacaaggaa caaggcatag agcaagcccc
     2761 aagagcaaga attgacaggg taacgtggca agaattgaac cgattagagc aagaagaacg
     2821 ccaaatcgtg caagagcttg cacttaaagg acaagaaatt aacaaagaaa aatcctactt
     2881 gcagaaaatc gaagaaaaac aggctcaagg aatgggcaaa tatgaatcca aattcgcagc
     2941 tgcgttttct aaattatcgg aaagtgccct aaaacacgat ttaagcaacg aaaaagaaaa
     3001 agacagtaaa atacacactc aagaagaaaa agtgcctcaa aatcgcattc aggggctttc
     3061 tcaagcagat tttgatcagt ttttaattga tgaatggcta cctcaaatag aaaaatacgt
     3121 taaagcccaa gaaaagcggg acggaatgga agtagagatc acgcaatacg acaaggattt
     3181 acagcgtatt cagggagact ataacaagct cacagataaa aatcagggtt ttctcggttt
     3241 atgggaaact aaagagcaaa aagcaaagaa aaaagagctt gaagatgaat acaaacatac
     3301 agcagagcaa cggaacgcta aaagccaaga attagccgag tatagccaaa aaataaaagc
     3361 atacgaacag aaaacgctag agccaatcaa cgagaagatt gccaaatatc aagctgacaa
     3421 ccctgaaata aaaatgcgga gcttaggatt tgtgaaaaaa attaaggctc aaggggcata
     3481 taaagcggct caagagcgaa tggagcgaga aaaacagcac caacaggaaa aacaacagag
     3541 acatttagag cgagagagtg gtttgagctt gtagctaacg ccctacgcct acggcttcgg
     3601 ttgttcaacc cttaaagaac tcgcaacaag ttgcgagttc tttaagggtt cgcaataaaa
     3661 acaaccgcta aacatttctg cccagcggtt gaaaatttac ctattcacca ttacaacaat
     3721 gatcaagcag gaaatttttt tgattgccgt aaatgtccgt atatctagtt gaggcacaac
     3781 ccgccaaagt cattgcccca accagaacgg cgataaccgt atatttaccg ataaggcatc
     3841 cggcagttca acagaccggg aagggctgga tttgctgagg atgaaggtgg aggaaggtga
     3901 tgtcattctg gttaagaagc tcgaccgtct tggccgcgac actgccgata tgatccaact
     3961 gataaaggaa tttgacgctc agggcgtggc agtccggttc attgatgacg ggatcagtac
     4021 cgacggtgat atggggcaaa tggtggtcac catcctgtcg gctgtggcac aggctgaacg
     4081 ccggaggatc ctagaacgca cgaatgaggg ccgacaggaa gcaaagctga aaggaatcaa
     4141 atttggccgc aggcgtaccg tggacaggaa cgtcgtgctg acgcttcatc agaagggcac
     4201 tggtgcaacg gaaattgctc atcagctcag tattgcccgc tccacggttt ataaaattct
     4261 tgaagacgaa agggcctcgt gatacgctta tttttatagg ttaatgtcat gataataatg
     4321 gtttcttaga cgtcaggtgg cacttttcgg ggaaatgtgc gcggaacccc tatttgttta
     4381 tttttctaaa tacattcaaa tatgtatccg ctcatgagac aataaccctg gtaaatgctt
     4441 caataatatt gaaaaaggaa gagtatgagt attcaacatt ttcgtgtcgc ccttattccc
     4501 ttttttgcgg cattttgcct tcctgttttt gctcacccag aaacgctggt gaaagtaaaa
     4561 gatgctgaag atcagttggg tgcacgagtg ggttacatcg aactggatct caacagcggt
     4621 aagatccttg agagttttcg ccccgaagaa cgttttccaa tgatgagcac ttttaaagtt
     4681 ctgctatgtg gtgcggtatt atcccgtgtt gacgccgggc aagagcaact cggtcgccgc
     4741 atacactatt ctcagaatga cttggttgag tactcaccag tcacagaaaa gcatcttacg
     4801 gatggcatga cagtaagaga attatgcagt gctgccataa ccatgagtga taacactgct
     4861 gccaacttac ttctgacaac gatcggagga ccgaaggagc taaccgcttt tttgcacaac
     4921 atgggggatc atgtaactcg ccttgatcgt tgggaaccgg agctgaatga agccatacca
     4981 aacgacgagc gtgacaccac gatgcctgca gcaatggcaa caacgttgcg caaactatta
     5041 actggcgaac tacttactct agcttcccgg caacaattaa tagactggat ggaggcggat
     5101 aaagttgcag gaccacttct gcgctcggcc cttccggctg gctggtttat tgctgataaa
     5161 tctggagccg gtgagcgtgg gtctcgcggt atcattgcag cactggggcc agatggtaag
     5221 ccctcccgta tcgtagttat ctacacgacg gggagtcagg caactatgga tgaacgaaat
     5281 agacagatcg ctgagatagg tgcctcactg attaagcatt ggtaactgtc agaccaagtt
     5341 tactcatata tactttagat tgatttaaaa cttcattttt aatttaaaag gatctaggtg
     5401 aagatccttt ttgataatct catgaccaaa atcccttaac gtgagttttc gttccactga
     5461 gcgtcagacc cctatctata aactcttggc ttggttctaa tccctctaaa cgattattat
     5521 caatagccgc tctaaccgct ttttctcggc ttaatttttc tgtctctgtt ataaaattgc
     5581 tattcatctt gttcttcttc
//
LOCUS       DAXFZM010000104         5582 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.105, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000104 DAXFZM010000000
VERSION     DAXFZM010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5582)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5582)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5582
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.105"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(1..215)
                     /locus_tag="ACFJAG_001900"
                     /pseudo
     CDS             complement(1..215)
                     /locus_tag="ACFJAG_001900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798941.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Opacity protein opA54"
     gene            493..1303
                     /locus_tag="ACFJAG_001901"
                     /pseudo
     CDS             493..1303
                     /locus_tag="ACFJAG_001901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146853.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="surface lipoprotein assembly modifier"
     gene            1467..2975
                     /gene="ppx"
                     /locus_tag="ACFJAG_001902"
     CDS             1467..2975
                     /gene="ppx"
                     /locus_tag="ACFJAG_001902"
                     /EC_number="3.6.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004309 - exopolyphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006798 - polyphosphate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exopolyphosphatase"
                     /protein_id="HFC3981118.1"
                     /translation="MTTNPANVLASVDLGSNSFRLQICENNNGQLKVIDSFKQMVRFA
                     AGLDEQKNLSTSSQEQALDCLAKFGERLRGFRPEQVRAVATNTFRVAKNIADFLPKAE
                     AALGFPIEIIAGREEARLIYTGVIHTLPPCGGKMLVIDIGGGSTEFVIGSTLNPDITE
                     SLPLGCVTYSLRFFQNKITAKDFQAAISAARNEIQRISKNMRREGWDFAVGTSGSAKS
                     IRDVLAAEMPQEADITYKGMRALAERIIEAGSVKKAKFENLKPERIEVFAGGLAVMMA
                     AFEEMKLDRMTVTEAALRDGVFYDLIGRGLNEDMRGQTVAEFQHRYHVSLNQAKRTAE
                     TAQTFMDSLCHAKNVTVQELALWQQYLGRAAALHEIGLDIAHTGYHKHSAYILENADM
                     PGFSRKEQTILAQLVIGHRGDMKKMGGIIGGNEMLWYAVLSLRLAALFCRSRQDLGFP
                     KNMQLRTDTESCGFILRIDSKWLERHPLIADALEYESVQWQKINMPFKVEAV"
     gene            complement(3185..3529)
                     /locus_tag="ACFJAG_001903"
     CDS             complement(3185..3529)
                     /locus_tag="ACFJAG_001903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981119.1"
                     /translation="MKKLLIAAMMAAALAACSQEAKQEVKEAAQAVESDVKDTAASAA
                     ESAASAAEEAKGQVKDAAADAKASAEEAVTEAKDAAAETKEAVSEAAKDTLNKAADAA
                     QEAADKMKDAAK"
     gene            complement(3846..4391)
                     /locus_tag="ACFJAG_001904"
     CDS             complement(3846..4391)
                     /locus_tag="ACFJAG_001904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981120.1"
                     /translation="MLKIPFAVLGGCLLLAACGKSENTAEQPQNAAQSAPKPVFKVKY
                     IDNTAIAGLALGQSSEGKTNDGKKQISYPIKGLPEQNAVRLTGKHPNDLEAVVGKCME
                     TDGKDAPSGWAENGVCHTLFAKLVGNIAEDGGKLTDYLISHSALQPYQAGKSGYAAVQ
                     NGRYVLEIDSEGAFYFRRRHY"
     gene            complement(4471..5481)
                     /gene="trpS"
                     /locus_tag="ACFJAG_001905"
     CDS             complement(4471..5481)
                     /gene="trpS"
                     /locus_tag="ACFJAG_001905"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004830 - tryptophan-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006436 - tryptophanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HFC3981121.1"
                     /translation="MSKKRVLTGVTTTGTPHLGNYVGAIRPAVRAAQNPDTESFLFLA
                     DYHGIIKCHEQEMIHQSTQAVAATWLACGLDPERTTFYRQSDIPEVMELNWILTCITA
                     KGLMNRAHAYKAAVQANAENGQEDPDFGVEMGLFSYPILMTADILMFNANEVPVGRDQ
                     IQHVEMARDIAGRFNHRFQELFTLPEVKIDENVELLVGLDGRKMSKSYGNTIPLWEND
                     KKTQKSVNKIITNMKEPGEPKQPDESPLFEIYKAFSTPSETAEFTQVLADGLAWGEAK
                     KLLAAKINAELAELRERYNALTSNPSQIEEILQAGAQKARKEARELLDKVRDAVGIRP
                     LK"
BASE COUNT         1262 a         1511 c         1486 g         1323 t
ORIGIN      
        1 tttgcttttg tctgtaccgg ttggtttcgg ataatcgtgg gtaatgcgtt cggcggcgta
       61 ggctaaatcc gcctgcacat acgggccgcg gccattgtct tcacccgccg cctgcgctgc
      121 ggaagagaag agaagagaag agaagagaag agaagagaag agaagagaag agaagagaag
      181 agaagagaag agaagttttt tggggctgga ttcattttcg gctccttata tcggtttgac
      241 cggttaaaaa aaaagatttt cactgatgtt gaagggcgga ttatatcggg ttccgggcgg
      301 tgtttcaaca caatatggcg gatgaacaaa aaccggtacg gcgttgcccc gccccggctc
      361 aaagggaacg gttccctaag gtgcccaagc accgggcgaa ccggttccgt actatctgta
      421 ctgtctgcgg cttcgccgcc ttgtcctgat ttttgttaat ccgctataaa caacgcttcg
      481 tccgaaaaaa cgattgaatt tgcgggcaga agctggacga aaaccgccga cagcctgccg
      541 caaaaggcac acggtttgcg ctacggcttg ggcgtgtcgc gcgaaatcaa tgcgggcggg
      601 catcatttcc tctacggcgg catcagcggc ggcgtgcatt attgggataa caaagatttc
      661 agcgaacaga gcctgcgcct gtcgttcggc catcaaaacc gttcggtaac acgctcgttc
      721 ggcaccgtgc cgtttgtcgg gcaaaacctc ttgggcggca gccgatacaa tttcgccggc
      781 ggcttcaatg ccgatttctc ccgacgcttg ggcgaacgct ggcggctgac gctgaacgcg
      841 ggcaatatgt ggaagcatta tcaggaagac cgcaccgccg cccgatacgg cagccatatg
      901 ccgctggcgg gcgcgacgct gatgtatccc gcgccgaaag accggctgct ttacggcggt
      961 gcggactggc cgcacgacat gacgaaagag gcggaacagg cttccgtccg caagggtttg
     1021 cgtgtcggcg cggtcaaaac gttcgacggc ggcttggggc tgcgggcaaa cctgcgctat
     1081 acccgcagga cttttgatgc acccgggaca tattgtgtac cgcttcccgc gcaaagacca
     1141 cgaatatcag gcaaacctgt cgttgcggca cgacaaaatc tcttggaagg gctttacgcc
     1201 gcaactcaat ttccgctatc tgaaaatcgg cagcaatatg aaaagttttt acacacgcaa
     1261 aaacacgcag attttcatga gcgtggaaaa ggatttcaaa taagcgcaaa aaatgccgtc
     1321 cgaacgtttt tcagacggca ttttttgctg tcggaaacat accgtcggca acatccgtga
     1381 gcagaatcaa aaacagccgc atcatttatt gtcaacgcct gcgccgtcag agtaacattg
     1441 cgtttttccc cccaccggta tccgccatga ccaccaatcc cgcaaacgtc ctcgcctccg
     1501 tcgatttggg ttccaacagt ttccgcctcc agatttgcga aaacaacaac ggacaattaa
     1561 aagtcatcga ttccttcaaa cagatggtcc gttttgccgc cggtctggac gaacagaaaa
     1621 acctcagcac atcctcgcag gaacaggctt tggactgcct ggcaaaattc ggcgaacgcc
     1681 tgcgcggctt ccgccccgag caggtgcgcg ccgtggcaac caatacattc cgcgtcgcca
     1741 aaaacatcgc agatttcctt cccaaggccg aagcggcact gggtttcccc atcgaaatca
     1801 tcgccgggcg cgaagaggcg cggctgattt ataccggcgt gatccacacc ctccccccct
     1861 gcgggggcaa aatgctggtt atcgacatcg gcggcggttc gacagaattt gtcatcggtt
     1921 cgacgctgaa tcccgacatt accgaaagcc tgcccttggg ctgcgtaacc tacagcctgc
     1981 gcttcttcca aaacaaaatc accgccaaag acttccaagc cgccatttcc gccgcccgca
     2041 acgaaatcca gcgcatcagc aaaaatatga ggcgcgaagg ttgggatttc gccgtcggca
     2101 catcgggttc ggcaaaatcc atccgcgacg tgcttgccgc cgaaatgccc caagaggcgg
     2161 acattaccta caagggaatg cgcgccctcg ccgaacgcat catcgaagcc ggttcggtca
     2221 aaaaagccaa atttgaaaac ctgaaaccgg aacgcatcga agtttttgcc ggcggacttg
     2281 ccgtgatgat ggcggcgttt gaggaaatga aactcgacag gatgaccgta accgaagccg
     2341 ccctgcgcga cggcgtgttt tacgatttaa tcgggcgcgg cttaaacgaa gatatgcgcg
     2401 gacaaacggt tgccgagttc caacaccgct accacgtcag cctcaatcag gcgaaacgca
     2461 ccgccgagac cgcgcaaacc tttatggaca gcctctgtca tgccaaaaac gttacggttc
     2521 aagaacttgc cttgtggcaa cagtatctcg gacgcgccgc cgcgctgcat gaaatcggtt
     2581 tggacatcgc ccataccggc tatcacaagc attccgccta catcctcgaa aacgccgata
     2641 tgccgggttt ttcacgcaag gaacagacca tacttgccca actggtcatc ggtcatcgcg
     2701 gcgatatgaa aaaaatgggc ggcattatcg gcggcaacga aatgttgtgg tatgccgttt
     2761 tgtccctgcg ccttgccgcc ctgttctgcc gttcgcgcca agatctgggt ttcccgaaaa
     2821 atatgcagtt gcgtacggat acggaaagct gcggcttcat cctgcgtatt gacagtaaat
     2881 ggctggaacg ccaccccctg attgccgacg cattggaata tgaaagcgtc caatggcaaa
     2941 aaatcaatat gccgttcaaa gtcgaggccg tctgaacctt gacaaaccaa atgccgtcta
     3001 aatgatgttc agacggcatt tccctgtccg caatatcccg atatgcgcgg cacatcctcc
     3061 ctgcacggtc atgcaggcgt aaaaaacaag gggcatacaa ctcaaaaacc gcctgaaaat
     3121 cttcaggcgg tttcatttgg gttgccggca ggcggcatct cgtcattttt gccaaggcaa
     3181 caaattattt ggcggcgtct ttcattttgt ctgccgcttc ctgagccgcg tcggcagctt
     3241 tgttcaaagt gtctttagcc gcttcgctta ccgcttcttt ggtttcggct gccgcgtctt
     3301 tggcttcagt tacagcttcc tcggcacttg cctttgcatc agccgcagca tctttgactt
     3361 ggcctttcgc ttcttcggcg gcagaagcgg cagactcggc ggcagaagcc gcagtgtctt
     3421 taacatcgga ctcaacggct tgggccgctt ctttaacctc ctgtttggct tcttgcgaac
     3481 aagctgccaa ggcagccgcc atcattgcgg caatcaataa ttttttcatg tcttatcctt
     3541 cttgagttgt tgattaaggt tttgcttaaa aaccggaccg tgttccatca atcggctgat
     3601 tttgcccatc ggccggagag aaaacggttt cccgtttagt taaaacccat tatattaaat
     3661 ataaagggtt ttttctcgaa caacaaggcg gcatcaatgc catattgaaa cacgtccgaa
     3721 aactatttta tgaaaacagt tcggaaaatt gtaacacaca tcccctcctt ttgagtttcc
     3781 cggcggcgcg gactttttcc gcaaggtttg aaaaatccaa atatattccg tgatgtccga
     3841 ataactcaat aatggcggcg gcggaaataa aacgccccct cgctgtcgat ttccagcaca
     3901 tagcgtccgt tctgcacggc ggcatagccg cttttgcctg cctgataggg ttgcagggcg
     3961 gaatgcgaaa tcaggtaatc cgtcagtttg ccgccgtctt cggcgatatt gcccaccagt
     4021 ttggcaaaca aggtatggca cacgccgttt tccgcccagc ccgaaggcgc gtcctttccg
     4081 tcggtttcca tacatttgcc gacgacggct tccaagtcgt tgggatgctt tccggtcagc
     4141 cggacggcgt tttgttccgg caagccttta atcggataac tgatttgttt tttgccgtcg
     4201 ttggttttgc cttcgctact ttgtcccaaa gccaaaccgg caatcgccgt attgtcgatg
     4261 tatttgactt tgaaaaccgg tttcggcgcg ctttgtgccg cattttgcgg ctgttccgcc
     4321 gtattttcgg atttgccgca ggcggcaagc agcaggcagc cgcccaacac ggcaaaaggt
     4381 attttcagca ttccgcactc ctgatggttt caaaatgccg tctgaatgcc gtctgaaacg
     4441 tggcaggcgg aggttcggac ggcattgggt ttatttcaac gggcggatgc cgaccgcatc
     4501 gcgtacttta tccaacaatt cgcgcgcttc tttgcgcgct ttttgcgcgc ctgcctgcaa
     4561 aatctcttcg atttgcgaag gattagaggt caatgcgttg tagcgttcgc gcagttctgc
     4621 cagttcggcg ttgattttcg ccgccaaaag ttttttcgcc tcgccccaag ccaagccgtc
     4681 ggcaagcact tgcgtaaatt ccgccgtttc agacggcgtg gagaaggctt tatagatttc
     4741 aaacaaaggg ctttcgtcgg gctgtttcgg ctcgcccggc tctttcatgt tggtgatgat
     4801 tttgttgacc gatttttggg tttttttgtc gttttcccaa agcggaatgg tattgccgta
     4861 ggatttggac attttgcgtc cgtccaaacc gaccaagagt tcgacgtttt cgtcgatttt
     4921 cacttcgggc agggtgaaga gttcttggaa acggtggttg aagcggccgg caatgtcgcg
     4981 cgccatttcg acgtgttgga tttggtcgcg cccgacgggg acttcgttgg cgttgaacat
     5041 caaaatgtcg gcagtcatca gaatcggata actgaacaaa cccatttcca caccgaaatc
     5101 ggggtcttcc tgcccgtttt ccgcattggc ttgaacggcg gctttgtagg cgtgggcgcg
     5161 gttcatcaaa cccttggcgg tgatgcaggt cagaatccag ttcaactcca tcacttcggg
     5221 aatgtcgctt tggcggtaga aggtggtgcg ctcggggtcg agtccgcagg caagccaagt
     5281 ggcggcaacg gcttgggtgg attggtgaat catctcctgc tcgtggcatt tgatgatgcc
     5341 gtggtaatcg gcgaggaaga ggaaggattc ggtatcgggg ttttgcgccg cgcggacggc
     5401 ggggcggatg gcgccgacgt agttgcccag atgcggggtg ccggtggtgg ttacgccggt
     5461 cagaactcgt tttttgctca taaaaatgtc cttacggcag caatgccgtc tgaaagggaa
     5521 aagatgcgcc gattataccc gatttgccac atacatccag ccgacaacag acttttccat
     5581 at
//
LOCUS       DAXFZM010000105         5403 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.106, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000105 DAXFZM010000000
VERSION     DAXFZM010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5403)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5403)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5403
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.106"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(65..364)
                     /locus_tag="ACFJAG_001906"
     CDS             complement(65..364)
                     /locus_tag="ACFJAG_001906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981122.1"
                     /translation="MVEAKIFILYGAANKGKSTTLNTLFNQICRKFSKFLVFFERYGN
                     GLDFVAVFDHEGQRIGFYSSGDNEYEVRRNLYKLYSHNCDFILARQGHGVVVAMQ"
     gene            complement(364..1665)
                     /gene="nuoF"
                     /locus_tag="ACFJAG_001907"
     CDS             complement(364..1665)
                     /gene="nuoF"
                     /locus_tag="ACFJAG_001907"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0050136 - NADH:ubiquinone reductase
                     (non-electrogenic) activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoF"
                     /protein_id="HFC3981123.1"
                     /translation="MAIYQSGVIFDQVDTANPDCWTLDEYVKRGGYTALRKILSENIS
                     QTDVIDEVKTSGLRGRGGAGFPTGLKWSFMPRSFPGEKYVVCNTDEGEPGTFKDRDII
                     MFNPHALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALEQARAAGFLGKNILGS
                     DFEFELFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTET
                     FSSVPFIIRDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGTPFAEVLKMAGG
                     MRGGKKLKAVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAIIVMDEDVCMVK
                     ALERLSYFYYDESCGQCTPCREGTGWLYRIVRRIVEGKGRMEDLDLLDSVGNQMAGRT
                     ICALADAAVFPVRSFTKHFRDEFAHYIEHGGPMKEHKWGGW"
     gene            complement(2055..2528)
                     /gene="nuoE"
                     /locus_tag="ACFJAG_001908"
     CDS             complement(2055..2528)
                     /gene="nuoE"
                     /locus_tag="ACFJAG_001908"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoE"
                     /protein_id="HFC3981124.1"
                     /translation="MLSAKSLKQIDIELAKYPADQRRSAIMGALRIAQTEKGWLAPET
                     IAFVADYIGITPAQAYEVATFYNMYDLEPVGKYKLTVCTNLPCALRGGMATGEYLKQK
                     LGIGYGETTPDGKFTLVEGECMGACGDAPVMLVNNHSMCSFMTEEAIEKKLAELE"
     gene            complement(2528..3784)
                     /gene="nuoD"
                     /locus_tag="ACFJAG_001909"
     CDS             complement(2528..3784)
                     /gene="nuoD"
                     /locus_tag="ACFJAG_001909"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050136 - NADH:ubiquinone reductase
                     (non-electrogenic) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH dehydrogenase (quinone) subunit D"
                     /protein_id="HFC3981125.1"
                     /translation="MANKLRNYTINFGPQHPAAHGVLRMILELDGEQIVRADPHIGLL
                     HRGTEKLAETKTYLQALPYMDRLDYVSMMVNEQAYCLAVEKLAGIDVPIRAQYIRVMF
                     AEVTRILNHLMGIGSHAFDIGAMTAILYAFRDREELMDLYEAVSGARMHAAYFRPGGV
                     YRDLPGFMPKYESSKFRNAKVLKQLNESREGTMLDFIDAFCERFPKNIDTLETLLTDN
                     RIWKQRTVGIGVVSPERAMQKGFTGVMLRGSGVEWDVRKTQPYEVYDKMDFDIPVGVN
                     GDCYDRYLCRMEEMRQSVRIIKQCADWLRVNPGPVITANHKFAPPKRTEMKTGMEDLI
                     HHFKLFTEGMHVPEGETYTAVEHPKGEFGVYIISDGANKPYRLKIRAPGFAHLQGMDE
                     MAKGHMLADVVAIIGTQDIVFGEVDR"
     gene            complement(3774..4367)
                     /locus_tag="ACFJAG_001910"
     CDS             complement(3774..4367)
                     /locus_tag="ACFJAG_001910"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HFC3981126.1"
                     /translation="MASIQNLYETVVGVLGDQAGKVISALGEITVECLPEHYISVMTA
                     LHDHEDLHFELLVDLCGVDYSTYKNEAWQGKRFAVVSQLLSVKNNQRIRVRVWVSDDD
                     FPVVESVADIYNSADWYEREAFDLSGIMFNNHPDLRRILTDYGFVGHPFRKDFPISGY
                     VEMRYDEEQKRVIYQPVTIEPREITPRIVREENYGGQ"
     gene            complement(4380..4862)
                     /locus_tag="ACFJAG_001911"
     CDS             complement(4380..4862)
                     /locus_tag="ACFJAG_001911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045271 - respiratory chain complex I
                     [Evidence IEA];
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B family
                     protein"
                     /protein_id="HFC3981127.1"
                     /translation="MGIEGVLKKGFITTSADTVLNYMRTGSLWPVTFGLACCAVEMMH
                     AGMARYDLDRFGIIFRPSPRQADLMIVAGTLTNKMAPALRRVYDQLAEPRWVLSMGSC
                     ANGGGYYHYSYSVVRGADRVVPVDVYVPGCPPTAEALIYGLIQLQQKIKRTSTIARDE
                     "
     gene            complement(4853..5209)
                     /locus_tag="ACFJAG_001912"
     CDS             complement(4853..5209)
                     /locus_tag="ACFJAG_001912"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HFC3981128.1"
                     /translation="MLSAYFPVFVFILVGLAAGVLFILLGTILGPKRHYAEKDAPYEC
                     GFEAFENARMKFDVRYYLVAILFILFDLEVAFMLPWAVVFKDLGAYGFWSMLVFIVVL
                     TVGFVYEWKKGALEWE"
BASE COUNT         1296 a         1376 c         1403 g         1328 t
ORIGIN      
        1 gtcttcatct gtaggctcaa acttttcaca ccaattaatt atatttacat cgccatgcaa
       61 tatcctactg catcgcaact accaccccgt gtccttgacg tgccaaaata aaatcacaat
      121 tatgcgaata aagtttgtat aaatttctcc taacctcgta ttcattatca ccagatgaat
      181 aaaaaccaat cctctgacct tcatgatcaa atactgcaac aaaatctaag ccgtttccat
      241 atctttcaaa aaagactaga aatttagaaa atttccgaca aatctgatta aaaagcgtat
      301 tgagtgtcgt actcttacct ttgttggctg caccgtatag aataaaaatt ttagcttcca
      361 ccattaccac cctccccact tatgctcttt catcggcccg ccgtgttcga tgtaatgcgc
      421 aaactcatca cggaaatgct tggtaaagct gcggacaggg aagacggcgg catcggcaag
      481 ggcgcagatg gtgcggcctg ccatttggtt gccgacagaa tccagcaaat ccaagtcttc
      541 catgcggcct ttgccttcta cgatgcggcg gacgatgcgg taaagccagc cggtaccttc
      601 gcggcagggg gtgcattggc cgcaggattc gtcgtagtag aaatagctta agcgttcgag
      661 ggctttgacc atgcacacgt cttcgtccat cacgataatc gcgccggaac cgagcatcga
      721 gccggctttg gaaatcgagt catagtccat attggtctgc atcataatgt cggcaggcaa
      781 tacgggggcg gacgaaccgc cgggaataac ggctttgagt tttttaccgc cgcgcatacc
      841 gcccgccatt ttcaagactt cggcaaacgg cgtgcccaac ggcacttcat agttgcccgg
      901 acgctcgaca tggccggaaa tacaaaataa tttggtaccg cctgcattcg gaataccttt
      961 atcggcaaac gcctgtccgc cgtcacggat aataaacggg acggaggaga acgtttcggt
     1021 attgttgatg gtggtcggtt tgccgtacag gccgaacgaa gcagggaacg gcggtttgaa
     1081 gcgcggctgg ccttttttgc cttccaacga ttcaagcaat gcggtttctt cgccgcaaat
     1141 atatgcgccg tagccgtggt gggcgaagag ttcgaattca aaatccgaac ccaaaatatt
     1201 tttacccaaa aagcctgcgg cacgcgcctg ctccaaagcg gcttcaaagc gttgataacc
     1261 ttcgaaaatt tcgccgtgga tatagttgta gccggctttc gcgcccatcg cgtaaccggc
     1321 aatgatcatg ccttcaatca gggcatgagg attgaacatg atgatgtcgc ggtctttaaa
     1381 tgtacccggc tcgccttcgt cggtgttgca aaccacatat ttttcgcccg ggaaagaacg
     1441 gggcataaag ctccatttca aaccggtcgg gaagcccgca ccgccgcgcc cgcgcaagcc
     1501 ggaggttttg acttcgtcaa tcacatcggt ttgcgagatg ttttcggaca ggattttacg
     1561 cagggcggta tagccgccgc gtttgacgta ttcgtccaat gtccagcaat cgggattggc
     1621 ggtatccact tggtcaaaaa tcacgcctga ttggtaaata gccatttttg gtgtgcctgt
     1681 ttgttttcgt atcggttgcg gccgctgttt cagacgacct taaaatgtct ttgtgtatcg
     1741 gcttgtaacg tcttctgaaa taaaatctag tttatcaaat cgatattttc agacgacctt
     1801 caatcgtttt tgttggatct cgaccacttg cttgtctgcc gtcattcccg cgcaggcggg
     1861 aatccatcct caatggtaag caatgtctta ttaaattcag aaaccgaatc ttaccggtgg
     1921 attcccgcct gcgcgggaat gacggcattt cggtatttca gtagggcgga ttcttaaatc
     1981 cgacattttg cctttttacc cactctgtcg gatacaagta tccgacctac gtttaaatcg
     2041 tcgtttcaga cgacctactc caactccgcc agtttcttct caatcgcctc ttcggtcata
     2101 aagctgcaca tgctgtggtt gttgaccagc ataacggggg catcgccgca cgcgcccatg
     2161 cattcgcctt cgacaagggt aaatttgccg tcgggcgtgg tttcgccgta gccgataccg
     2221 agtttttgtt tgaggtattc gccggtcgcc ataccgccgc gcagagcgca gggcaggttg
     2281 gtacaaacgg tcagtttgta tttgccgaca ggctcaaggt cgtacatatt gtagaaagtg
     2341 gcgacttcat atgcctgcgc cggcgtgatg ccgatgtagt cggcaacaaa agcgatggtt
     2401 tcgggggcga gccagccttt ttcggtttgg gcgatacgca acgcgcccat gatggcggaa
     2461 cggcgttggt cggcgggata tttcgccaac tcaatgtcga tttgttttaa ggattttgcg
     2521 gataacatta tcggtcaacc tccccgaata cgatgtcctg cgtaccgatg atggcaacga
     2581 cgtcggcgag catatggcct tttgccattt cgtccatgcc ttgcaggtgg gcgaagccgg
     2641 gtgcgcggat tttcaggcgg tagggtttgt ttgcgccgtc tgaaatgatg taaacgccga
     2701 actcgccttt cgggtgttcg acagcggtgt aggtctcgcc ctcgggaacg tgcataccct
     2761 cggtaaagag tttgaaatgg tgaatcaggt cttccatacc tgttttcatt tcggtacgtt
     2821 tgggcggagc gaatttgtgg tttgcggtaa tgaccgggcc gggattgacg cgcaaccagt
     2881 cggcgcattg tttgatgatg cgtacggatt ggcgcatttc ttccatacgg cagaggtaac
     2941 ggtcgtagca gtcgccgttg acgccgacgg ggatgtcgaa atccattttg tcgtacactt
     3001 cgtagggctg tgtcttacgc acgtcccatt ccacgccgga accgcgaagc atcacaccgg
     3061 taaagccttt ttgcatggcg cgctcgggag agacaacgcc gatgccgacg gtacgctgtt
     3121 tccagatgcg gttgtcggtc aggagggttt cgagtgtgtc gatatttttg gggaagcgtt
     3181 cgcagaaggc atcgataaag tcaagcatcg tgccttcgcg ggattcgttg agctgcttca
     3241 atactttggc attgcggaat ttgctgctct cgtatttggg cataaagccg ggtaggtcgc
     3301 ggtaaacgcc gccgggacgg aagtaggcgg cgtgcatacg tgcgccggac acggcttcgt
     3361 acaagtccat cagctcttcg cggtcgcgga aggcgtagag gatggcggtc atcgcgccga
     3421 tgtcgaaggc gtgcgaaccg atgcccatca agtgattgag gatgcgcgtt acttcggcga
     3481 acatcacgcg gatgtattgg gcgcggatag gcacatcgat accggcaagt ttttctaccg
     3541 ccaagcaata cgcctgctcg ttgaccatca tggaaacgta gtccaaacgg tccatatagg
     3601 gcagggcttg cagataggtt ttggtttccg ccagtttttc ggtgccccgg tgcaggaggc
     3661 cgatatgcgg atcggcacgg acgatttgtt cgccgtccag ctccaaaatc atacgcaata
     3721 cgccatgcgc cgcagggtgt tgcgggccga agttgatggt gtagtttctt aatttattgg
     3781 ccaccgtagt tctcctcacg gacgatacgc ggtgtgattt cgcgcggctc aatggtaaca
     3841 ggttggtaaa tcacgcgttt ttgctcttcg tcataacgca tttccacata gccggaaatc
     3901 gggaagtctt tgcggaacgg atgtccgaca aagccgtaat cggtcaggat gcggcgcaag
     3961 tcgggatggt tgttgaacat gatgccggac aaatcgaagg cttcgcgctc gtaccaatcc
     4021 gcgctgttgt aaatatcggc tacggattcg actacaggga agtcgtcgtc tgaaacccag
     4081 acgcgtacgc ggatgcgttg attgttttta acggaaagca actgactgac aacggcaaag
     4141 cgtttgccct gccatgcttc gtttttgtaa gtgctgtaat cgacgccgca caagtcaacc
     4201 agaagctcga aatgcaaatc ttcatggtcg tgcaatgcgg tcatgactga aatatagtgc
     4261 tcgggcagac actcgacggt aatctcgccc aaagctgaaa tgactttgcc tgcctgatcg
     4321 ccaagcacgc cgacgacggt ctcgtataag ttttgaatgc ttgccatatc gtcctctcct
     4381 tactcgtcac gcgcgatggt ggaagtgcgc ttgatttttt gttggagctg aatcaggccg
     4441 taaatcagag cttccgcagt cggcggacaa cccggcacat aaacgtccac cggcacgaca
     4501 cggtcggcac cgcgcacaac ggaataagaa tagtgataat agccgccgcc gttggcacac
     4561 gaacccatag acaataccca gcgcggctcg gcgagctggt cgtacacgcg acgcagggct
     4621 ggcgccattt tattggtcag cgtacctgcc acaatcatca ggtcggcctg acgtggggac
     4681 ggacggaaaa tgataccgaa acggtcaagg tcataacgcg ccatacccgc atgcatcatt
     4741 tccacggcgc agcaggccaa tccgaaagta accggccaca atgaaccggt acgcatatag
     4801 ttcaacaccg tatccgcgct ggtggtgatg aaaccttttt tcaaaacgcc ttctattccc
     4861 attccagcgc accttttttc cattcgtaaa caaagcctac cgtcaggacg acgataaaca
     4921 ccagcataga ccaaaagccg tacgcgccca aatctttgaa cacgactgcc cacggcagca
     4981 taaacgcaac ctccaaatcg aagaggatga acaggatggc gacgaggtaa tagcgcacgt
     5041 cgaacttcat ccttgcgttt tcaaaggctt caaaaccgca ttcgtaaggc gcgtcttttt
     5101 cggcatagtg gcgtttcggg cccaaaatcg tgccgagcag gataaacagt acgccggccg
     5161 cgaggccgac gaggataaag acaaagacgg gaaagtaagc ggacaacatg gttacaccca
     5221 aatccgttaa caaaatttct acaataattt cgtattttag cgaatttcaa aaaccattaa
     5281 aaggtaaata tcggcaaaac gcccaaaaaa acccaataaa tacaatcatg ttatgataac
     5341 gattcttatt tgattttata aggtcatata aatttttaca ccgtaattcg tggtatagcg
     5401 gat
//
LOCUS       DAXFZM010000106         5393 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.107, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000106 DAXFZM010000000
VERSION     DAXFZM010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5393)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5393)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5393
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.107"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            286..780
                     /locus_tag="ACFJAG_001913"
     CDS             286..780
                     /locus_tag="ACFJAG_001913"
                     /inference="COORDINATES: protein motif:HMM:NF014691.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic/DOC family protein"
                     /protein_id="HFC3981129.1"
                     /translation="MQPITGNFDLAHLQTIHRELFGNVYDWAGKIRRVDISKGNTRFA
                     NFAFIENESRKLLEKLKNENYLRVLDKDKFAERAAYYLDELNVLHPFREGNGRTLRLF
                     MTQLAIKNGFQIHWQNISAEQMIQACIQAYHADSSLLARLIIRQFRTIVFFRRLKHQQ
                     TTIF"
     gene            793..1179
                     /gene="iscU"
                     /locus_tag="ACFJAG_001914"
     CDS             793..1179
                     /gene="iscU"
                     /locus_tag="ACFJAG_001914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly scaffold IscU"
                     /protein_id="HFC3981130.1"
                     /translation="MAYSDKVIDHYENPRNVGTFDKNDESVGTGMVGAPACGDVMRLQ
                     IKVNDEGIIEDAKFKTYGCGSAIASSSLITEWVKGKSLDDALAIKNSEIAEELELPPV
                     KIHCSILAEDAVKAAVADYRKRQENR"
     gene            1266..1586
                     /gene="iscA"
                     /locus_tag="ACFJAG_001915"
     CDS             1266..1586
                     /gene="iscA"
                     /locus_tag="ACFJAG_001915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003764837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly protein IscA"
                     /protein_id="HFC3981131.1"
                     /translation="MITLTENAAKHINDYLAKRGKGLGVRLGVKTSGCSGMAYNLEFV
                     DEANGDDLIFEGHGARIYIDPKSLVYLDGTQVDYTKEDLQEGFKFENPNVKDSCGCGE
                     SFHV"
     gene            complement(1546..1767)
                     /locus_tag="ACFJAG_001916"
     CDS             complement(1546..1767)
                     /locus_tag="ACFJAG_001916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alternative ribosome-rescue factor A"
                     /protein_id="HFC3981132.1"
                     /translation="MGGKAQHNKGKIRDNALKALVKSDLFRHKVERKRKGKGSYNRQE
                     AKKRRDGFDTVPPFLCLKRGSSRRSRRSL"
     gene            1849..2349
                     /gene="hscB"
                     /locus_tag="ACFJAG_001917"
     CDS             1849..2349
                     /gene="hscB"
                     /locus_tag="ACFJAG_001917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001671 - ATPase activator activity
                     [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0044571 - [2Fe-2S] cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly co-chaperone HscB"
                     /protein_id="HFC3981133.1"
                     /translation="MSQYFTLFRIEPAFDIGTENLEQTYRALAARFHPDKFASASAFE
                     QKQAVMMSSTINDAYRTLKNPIDRAAYLLKTSGIDADAPEHTSFAPDFLMQQMEWRET
                     LMEARAGNNLESLKNLDNEIRAEQEKLFCGLKQSFARQDCDTAAQQVRQGRFLDKLRH
                     EISSAL"
     gene            2447..5197
                     /gene="gyrA"
                     /locus_tag="ACFJAG_001918"
     CDS             2447..5197
                     /gene="gyrA"
                     /locus_tag="ACFJAG_001918"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006259 - DNA metabolic process [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HFC3981134.1"
                     /translation="MTDATIRHDHKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPD
                     VRDGLKPVHRRVLYAMHELKNNWNAAYKKSARIVGDVIGKYHPHGDFAVYATIVRMAQ
                     NFAMRYVLIDGQGNFGSVDGLAAAAMRYTEIRMAKISHEMLADIEEETVNFGPNYDGS
                     EHEPLVLPTRFPTLLVNGSSGIAVGMATNIPPHNLTDTINACLRLLDEPKTEIDELID
                     IIQAPDFPTGATIYGLGGVREGYKTGRGRVVMRGKTHIEPIGKNGEREAIVIDEIPYQ
                     VNKAKLVEKIGDLVREKTLEGISELRDESDKSGMRVVIELKRNENAEVVLNQLYKLTP
                     LQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRREVVTRRTLFRLKKARHEGHIAEGK
                     AVALSNIDEIIKLIKESPNAAEAKEKLLARPWRSSLVEEMLTRSGLDLEMMRPEGLAA
                     NIGLKKQGYYLSEIQADAILRMSLRNLTGLDQKEIIESYKNLMGKIIDFVDILSKPER
                     ITQIIRDELEEIKTNYGDERRSEINPFGGDIADEDLIPQREMVVTLTHGGYIKTQPTT
                     DYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMCFTNLGKCHWIKVYKLPEGGRN
                     SRGRPINNVIQLEEGEKVSAILAVREFPEDQYVFFATAQGMVKKVQLSAFKNVRAQGI
                     KAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNEYWEKSGNDEAEDADIETEISD
                     DLEDETADNENTLPSGKNGVRPSGRGSGGLRGMRLPADGKIVSLITFAPETEESGLQV
                     LTATANGYGKRTPIADYSRKNKGGQGSIAINTGERNGDLVAATLVGETDDLMLITSGG
                     VLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAEDESELSGASVISNVTEPEA
                     EN"
BASE COUNT         1547 a         1469 c         1258 g         1119 t
ORIGIN      
        1 gacaaaagat gttgatgata tcactggttc atggaaaatg gagaatttag aaattagccg
       61 acaaactcaa tatgcaatgc aacttctaaa gattggtaaa acaaatattg agaaagaaat
      121 aagaaaaatt aaacaaaggt tctaaaaaaa tgagtaaata cggtggtgaa gacgtaatct
      181 atatgaatga tggtgtattt agaaataaat tagccattca agatccactt aaatttaaaa
      241 aaggtcgaaa gagacatttc tgctatttcc gcccaaaatc tgcttttgca acccattaca
      301 ggcaatttcg atttggcgca tttacagacc attcatcgcg aactgtttgg caatgtttat
      361 gattgggcag gaaaaatccg gagggttgat atttctaaag gtaatacccg atttgccaat
      421 tttgctttta tcgaaaacga aagccgtaaa cttttggaga agctgaaaaa cgaaaactat
      481 ttgcgggtgt tggataaaga taaattcgcc gagcgtgcag cctattattt ggacgagttg
      541 aacgtcctac atccttttcg tgaaggaaac ggcagaacat tgcgcctgtt tatgacacaa
      601 ttggcaataa aaaacggttt tcagatacat tggcaaaata tctctgccga acaaatgatt
      661 caagcctgta ttcaggcata ccatgccgat agcagcttat tggcacgcct aattattaga
      721 caatttagaa caatcgtctt tttcagacga ctaaaacatc aacaaaccac gatattttaa
      781 ggaaaccaca tcatggcata cagcgataaa gtaatcgacc actacgaaaa tccccgcaac
      841 gtcggcactt tcgacaaaaa cgacgagtcc gtcggcaccg gcatggtcgg cgcgcccgcc
      901 tgcggcgacg tgatgcgcct gcaaatcaaa gtgaacgatg aaggcatcat cgaagatgcg
      961 aaattcaaaa cttacggctg cggttccgcc atcgcttcgt ccagcctgat taccgagtgg
     1021 gtcaaaggca aaagtctgga tgacgcgctg gcaatcaaaa acagcgaaat cgccgaagaa
     1081 ctggaattgc cgccggtaaa aatccactgc tccatcttgg ctgaagatgc ggtaaaagcg
     1141 gccgttgccg actaccgcaa acgtcaggaa aacagataaa gcccttcaga cggcatcgtc
     1201 ccacaatgcc gtccgaaccg cccgccgctt cggatccgtc cggggcggta caacaaggaa
     1261 gaaatatgat tacccttacc gagaatgccg caaaacacat caatgactat ctcgccaaac
     1321 gcggcaaagg cttgggcgta cgcttgggtg taaaaaccag cggctgctcg gggatggcgt
     1381 acaaccttga atttgtcgat gaagccaacg gcgacgacct gattttcgaa ggacacggcg
     1441 cgcgcattta tatcgacccg aaaagcttgg tttatctgga cggcacacaa gtcgattaca
     1501 ccaaagaaga tttgcaggaa ggtttcaaat ttgaaaaccc caatgtcaaa gactcctgcg
     1561 gctgcggcga gagcttccac gtttaaggca taaaaacggc gggacagtat caaaaccgtc
     1621 ccgccgtttt ttcgcttcct gcctgttgta gctgcctttg cctttccttt tccgttccac
     1681 cttgtgccgg aacaaatcgg attttactaa ggcttttaaa gcattgtcgc gtattttgcc
     1741 tttattgtgc tgcgctttgc cgcccatatt cagtcctttc gtttaagaag ccgcagatta
     1801 taaggcaaaa acagttttct gccaaaatct tacatttatc atcctactat gtcccaatat
     1861 ttcaccctct tccggattga acccgctttc gatatcggca ccgaaaactt ggaacaaacc
     1921 taccgcgcct tggccgcccg tttccatccc gacaaattcg cttccgcttc cgctttcgag
     1981 cagaaacagg cggttatgat gtcttccacc atcaacgatg cctaccgcac cttgaaaaat
     2041 cccatcgacc gcgccgcgta cctgctgaaa acatcgggta tcgatgccga tgcgccggaa
     2101 catacctctt tcgcccccga cttcctcatg cagcaaatgg aatggcgcga aacgctgatg
     2161 gaggcacggg caggcaacaa ccttgaatcc ttgaaaaatc tcgataacga aatccgcgcc
     2221 gaacaagaaa aactgttctg cggtctgaaa cagtcattcg cgcgccaaga ctgcgacacc
     2281 gccgcacaac aagtccgcca aggcaggttt ctcgacaaac tccgccacga aatttcctcc
     2341 gcattataat ccgcaccgtg tttcagacgg cataaccgcc gcaccgtttc atgtcgaaat
     2401 atgctaaaat aagcaacaat tttttgccat acgaaacatt gaaaccatga ccgacgcaac
     2461 catccgccac gaccacaaat tcgccctcga aaccctgccc gtcagccttg aagacgaaat
     2521 gcgcaaaagc tatctcgact acgccatgag cgtcattgtc gggcgcgcgc tgccggacgt
     2581 tcgcgacggc ctaaagccgg tgcaccggcg cgtactgtac gcgatgcacg agctgaaaaa
     2641 taactggaat gccgcctaca aaaaatcggc gcgcatcgtc ggcgacgtca tcggtaaata
     2701 ccacccccac ggcgatttcg cagtttacgc caccatcgtc cgtatggcgc aaaatttcgc
     2761 tatgcgttat gtgctgatag acggacaggg caacttcgga tcggtggacg ggcttgccgc
     2821 cgcagccatg cgctataccg aaatccgcat ggcgaaaatc tcacatgaaa tgctggcaga
     2881 cattgaggaa gaaaccgtta atttcggccc gaactacgac ggtagcgaac acgagccgct
     2941 tgtactgccg acccgtttcc ccacactgct cgtcaacggc tcgtccggta tcgccgtcgg
     3001 tatggcgacc aacatcccgc cgcacaacct caccgacacc atcaacgcct gtctgcgtct
     3061 tttggacgaa cccaaaaccg aaatcgacga actgatcgac attatccaag cccccgactt
     3121 cccgaccggg gcaaccatct acggcttggg cggcgtgcgc gaaggctata aaacaggccg
     3181 cggccgcgtt gttatgcgcg gtaagaccca tatcgaaccc ataggcaaaa acggcgaacg
     3241 cgaagccatc gttatcgacg aaatccccta tcaggtcaac aaagccaagt tggtcgagaa
     3301 aatcggcgat ttggttcggg aaaaaacact ggaaggcatt tccgagctcc gcgacgaatc
     3361 cgacaaatcc ggtatgcgcg tcgttatcga gctgaaacgc aacgaaaatg ccgaagtcgt
     3421 cttaaaccaa ctctacaaac tgactccgct gcaagacagt ttcggcatca atatggtggt
     3481 tttggtcgac ggacaaccgc gcctgttaaa cctgaaacag attctctccg aattcctgcg
     3541 ccaccgccgc gaagtcgtta cccgacgtac gcttttccgg ctgaagaagg cacgccatga
     3601 agggcatatc gccgaaggca aagccgtcgc actgtccaat atcgatgaaa tcatcaagct
     3661 catcaaagaa tcgcccaacg cggccgaggc caaagaaaaa ctgcttgcgc gcccttggcg
     3721 cagcagcctc gttgaagaaa tgctgacgcg ttccggtctg gatttggaaa tgatgcgtcc
     3781 ggaaggattg gctgcaaaca ttggtctgaa aaaacaaggt tattacctga gcgagattca
     3841 ggcagatgct attttacgca tgagcctgcg aaacctgacc ggcctcgatc agaaagaaat
     3901 tatcgaaagc tacaaaaacc tgatgggtaa aatcatcgac tttgtggata tcctctccaa
     3961 acccgaacgc attacccaaa tcatccgtga cgaactggaa gaaatcaaaa ccaactatgg
     4021 cgacgaacgc cgcagcgaaa tcaacccgtt cggcggcgac attgccgatg aagacctgat
     4081 tccgcaacgc gaaatggtcg tgaccctgac ccacggcggc tatataaaaa cccagccgac
     4141 caccgactat caggctcagc gtcgcggcgg gcgcggcaaa caggcggctg ccaccaaaga
     4201 cgaagacttt atcgaaaccc tgtttgttgc caacacgcat gactatttga tgtgttttac
     4261 caacctcggc aagtgccact ggattaaggt ttacaaactg cccgaaggcg gacgcaacag
     4321 ccgcggccgt ccgattaaca acgtcatcca gctggaagaa ggcgaaaaag tcagcgcgat
     4381 tctggcagta cgcgagtttc ccgaagacca atacgtcttc ttcgccaccg cgcagggaat
     4441 ggtgaaaaaa gtccaacttt ccgcctttaa aaacgtccgc gcccaaggca ttaaagccat
     4501 cgcactcaaa gaaggcgact acctcgtcgg cgctgcgcaa acaggcggtg cggacgacat
     4561 tatgttgttc tccaacttgg gcaaagccat ccgcttcaac gaatactggg aaaaatccgg
     4621 caacgacgaa gcggaagatg ccgacatcga aaccgagatt tcagacgacc tcgaagacga
     4681 aaccgccgac aacgaaaaca ccctgccaag cggcaaaaac ggcgtgcgtc cgtccggtcg
     4741 cggcagcggc ggtttgcgcg gtatgcgcct gcctgccgac ggcaaaatcg tcagcctgat
     4801 taccttcgcc cctgaaaccg aagaaagcgg tttgcaagtt ttaaccgcca ccgccaacgg
     4861 atacggaaaa cgcaccccga ttgccgatta cagccgcaaa aacaaaggcg ggcaaggcag
     4921 tattgccatt aacaccggcg agcgcaacgg cgatttggtc gccgcaacct tggtcggcga
     4981 aaccgacgat ttgatgctga ttaccagcgg cggcgtgctt atccgtacca aagtcgaaca
     5041 aatccgcgaa accggccgcg ccgcagcagg cgtgaaactg attaacttgg acgaaggcga
     5101 aaccttggta tcgctggaac gtgttgccga agacgaatcc gaactctccg gcgcttctgt
     5161 aatttccaat gtaaccgaac cggaagccga gaactgaaaa tcatctcccg atgccgtctg
     5221 aagattcaga cggcatttat ttttccctca tccgtcatcc agcttctcac aatatagcgg
     5281 attaacaaaa atcaggataa ggcgacgaag ccgcagacag cacaaatata gtggattaaa
     5341 tttaaactag tacagcgttg cctcgccttg ccgtactata gtcaattaaa aac
//
LOCUS       DAXFZM010000107         5283 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.108, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000107 DAXFZM010000000
VERSION     DAXFZM010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5283)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5283)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5283
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.108"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            104..925
                     /locus_tag="ACFJAG_001919"
     CDS             104..925
                     /locus_tag="ACFJAG_001919"
                     /EC_number="2.7.11.33"
                     /EC_number="2.7.4.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016776 - phosphotransferase activity,
                     phosphate group as acceptor [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate, water dikinase regulatory protein"
                     /protein_id="HFC3981135.1"
                     /translation="MSSPRQVFYISDRTGLTAENIGEALLNQFGNLSFKRHTHPFVDT
                     PEKARAVVEKVNRSRQENGQRPIAFVSVVDDEIRRIIKGADAFQINFFETFLGLLEKE
                     LNTEATVSGQGHHSIGNTKRYDARMEAVNFSLNHDDGVSDKNLQEADVILMGVSRSGK
                     TPTCLYLALQYGIRAANYPLIPDDLESADLPRMVKPYKDKLFGLTIQPERLQAIRQER
                     RPNSAYARIDTCRSEVADAQSMFRRHGIPFANTTDKSVEELAVHILQACKLKRRF"
     gene            complement(1011..1673)
                     /locus_tag="ACFJAG_001920"
     CDS             complement(1011..1673)
                     /locus_tag="ACFJAG_001920"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HFC3981136.1"
                     /translation="MIQAVLFDLDGTLADTALDLGGALNTQLARHGLPEKSMDEIRTQ
                     ASHGAAGLLKLGANITPEHPDYTAWRTEYLEEYDSRYAQDTTLFDGVNELIAELDRRG
                     IKWGIITNKPMRFTDKLVPKLGFAVPPATVVSGDTCGEPKPSIKPMLHACGKIHADPQ
                     HTLYVGDAERDIQAGRNAGMKTVLAEWGYISDEDDTGSWQADFHIRTPLDLLECLDKI
                     QP"
     gene            complement(1711..2538)
                     /locus_tag="ACFJAG_001921"
     CDS             complement(1711..2538)
                     /locus_tag="ACFJAG_001921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HFC3981137.1"
                     /translation="MKPDIYALLERALLSGDPDEKGRLTDEAFAAVQNADGAEANAPP
                     ADFPRAGRPDTPVLVAPSQLTPRKMNTAEGYAAMLHAITHIEFNAVNLALDAAYRFRT
                     LPFQFVRDWVKVAKEEVYHFRLVRDRLRAFGFDYGSFEAHNHLWDMAYKTAYDPLLRM
                     ALVPRVLEARGLDVTPGIRAKVEQRGDSATCGVLDIIYRDEVGHVAIGNRWYQHLCRE
                     RGLEPVALFRSLIARYDMFIFRGYVNIEAREKAGFSRFELDMLEDFEQGLKQNKHAV"
     gene            2921..3544
                     /gene="lolA"
                     /locus_tag="ACFJAG_001922"
     CDS             2921..3544
                     /gene="lolA"
                     /locus_tag="ACFJAG_001922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein chaperone LolA"
                     /protein_id="HFC3981138.1"
                     /translation="MMKPHNLFQFLAVCSLTVAVASAQAGAVDALKQFNNDADGISGS
                     FTQTVQSKKKTQTAHGTFKILRPGLFKWEYTLPYKQTIVGDGQTVWLYDVDLAQVTKS
                     SQDQAIGGSPAAILSNKTALESSYTLKEDGSSNGIDYVRATPKRNNAGYQYIRIGFKG
                     GNLAAMQLKDSFGNQTSISFGGLNTNPQLSRGAFKFTPPKGVDVLSN"
     gene            3817..4953
                     /locus_tag="ACFJAG_001923"
     CDS             3817..4953
                     /locus_tag="ACFJAG_001923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0019808 - polyamine binding [Evidence
                     IEA];
                     GO_process: GO:0015846 - polyamine transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HFC3981139.1"
                     /translation="MKKTLVAAILSLALTACGGGSDTAAQTPSAKPEAEQSGKLNIYN
                     WSDYVDPETVAAFEKETGIKMRSDYYDSNETLEAKVLTGKSGYDLTAPSIANVGRQIK
                     AGAYQKIDKAQIPHYGNIDKDLLKMMEAVDPGNEYAVPYFWGINTLAINTRQVQKALG
                     TDKLPENEWDLVFKPEYTAKLKSCGISYFDSAIEQIPLALHYLGKDPNSENPEDIKAA
                     VDMMKAVRGDVKRFSSSGYIDDMAAGNLCAAIGYGGDLNIAKTRAEEAANGVEIKVLT
                     PKTGVGVWVDSFMIPRDAQNVANAHRYIDYTLRPEVAAKNGSFVTYAPASRPARELMD
                     EKYTSDASIFPTKELMEKSFIVSPKSAESVKLGVKLWQGLKAGK"
     gene            5048..5283
                     /locus_tag="ACFJAG_001924"
                     /pseudo
     CDS             5048..5283
                     /locus_tag="ACFJAG_001924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704837.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
BASE COUNT         1244 a         1426 c         1461 g         1152 t
ORIGIN      
        1 gttttttggg gtgtaatccg aggtaggggc ggctggggtg cttctccctt gtctgccgct
       61 gctgttatga tgatattttt attctgtatt taaggagggg gtgatgagca gtccgcgcca
      121 agtgttttat atttccgacc gcaccggtct gactgccgag aatatcggcg aggctttgct
      181 gaaccagttt ggcaatctgt cgttcaaacg ccatacgcat ccgtttgtcg atacgccgga
      241 aaaggcgcgc gcggtggtgg agaaggtcaa tcggagccgg caggaaaacg gtcagcgtcc
      301 gattgcgttt gtcagtgtgg ttgatgacga aatccgccgg attattaaag gggcggatgc
      361 ttttcagatt aatttctttg agactttttt gggactgttg gagaaggaac tcaataccga
      421 agcaacggta tccgggcagg ggcatcacag tatcggcaat acgaagcgtt acgatgcgcg
      481 tatggaggcg gtcaattttt ctttgaacca tgatgacggg gtcagcgata agaaccttca
      541 ggaggcggat gtgattctga tgggcgtgtc ccgttcgggc aaaacgccga cctgcctgta
      601 tctggcgttg caatacggta tccgtgcggc aaactatccg ctgattcccg acgatttgga
      661 atcggccgat ctgccgcgta tggtcaagcc gtataaagac aaactgttcg ggttgactat
      721 ccagccggaa cgtttgcagg ccatccgtca ggaacgccgc ccgaattcgg cttatgcgcg
      781 catcgacacc tgccgcagcg aagtggcgga cgcgcagagt atgttcagac ggcatggcat
      841 tccgtttgcg aatacgacgg acaagtcggt tgaggaactg gcggtacaca tccttcaggc
      901 gtgcaagctc aaacgcaggt tttgacgggc tttgattcgg tttgaaggtg gaaatgccgt
      961 ctgaaatcag gtttcagacg gcagttttat gtttgtgggg cggatatttt tcagggctgt
     1021 attttgtcca gacattcgag cagatcgagc ggcgtgcgga tgtggaaatc cgcctgccat
     1081 gagccggtat cgtcttcatc ggaaatatag ccccattcgg cgaggacggt tttcataccg
     1141 gcgttgcgtc cggcttggat gtcgcgttcc gcgtcgccga cgtagagggt gtgttgcggg
     1201 tcggcgtgga tttttccgca ggcgtgcagc atgggtttga tgctgggttt gggttcgccg
     1261 caggtgtcgc cgctgacgac ggtggcgggc ggaacggcga atccgagttt gggaacgagt
     1321 ttgtcggtga agcgcatggg tttgttggtg atgatgcccc atttgatgcc gcgtctgtcg
     1381 agttcggcga tgagttcgtt cacgccgtcg aagagagtgg tgtcttgggc gtagcggctg
     1441 tcgtattcct ccagatattc ggtgcgccat gcggtatagt cggggtgttc gggcgtgatg
     1501 ttcgcgccga gtttgagcaa tcctgccgcg ccgtggctgg cttgggtgcg gatttcgtcc
     1561 atgctttttt cgggcagtcc gtggcgggcg agttgggtgt tgagtgcgcc gccgaggtct
     1621 agggcggtgt cggcgagcgt gccgtcgagg tcgaacaata cggcttgtat catgtgtttt
     1681 ccttttttat aaagtgcggg acgaaaggtt tcagacggca tgtttatttt gtttcaaacc
     1741 ctgctcgaaa tcttccaaca tatccaattc gaagcggctg aagcccgctt tttcccgcgc
     1801 ttcgatgttc acatagccgc ggaagataaa catatcgtaa cgggcaatca gactgcggaa
     1861 cagggcgaca ggttccaaac cgcgttcgcg gcagaggtgt tgataccacc ggttgccgat
     1921 ggcgacgtgt cccacttcgt cgcggtaaat gatgtccaac acgccgcagg ttgccgaatc
     1981 gccgcgctgc tccaccttcg cgcgtatccc cggcgtaacg tccagtccgc gcgcctccaa
     2041 cacgcgcggt accaacgcca tacgcaacag cgggtcgtag gcggttttgt acgccatatc
     2101 ccacaaatgg ttgtgcgcct cgaaactgcc gtaatcgaag ccgaaagcgc gcaatctgtc
     2161 gcgcaccagg cggaagtggt acacctcctc cttcgccact ttcacccagt cgcggacaaa
     2221 ctgaaacggc agcgtgcgga aacggtatgc cgcgtccaaa gccagattga cggcgttgaa
     2281 ctcgatatgc gtaatcgcgt gcagcatcgc cgcatagcct tctgccgtgt tcattttgcg
     2341 cggggtcagt tgcgagggcg cgaccaaaac aggcgtgtcc ggccgtcccg cgcgggggaa
     2401 gtccgccggc ggcgcgtttg cctccgcccc gtccgcattt tgaacggcgg caaacgcctc
     2461 atccgtcagc cgtccttttt catcggggtc gcccgaaagc agggcgcgtt ccagcaaagc
     2521 ataaatatcg ggtttcatct caagtccgcc gtgttcggaa aacgaatatt atagcgttta
     2581 aaaaaaacaa gatgaggcat ataatctccg cgattcggca ttccgcgccc aaaccgtcaa
     2641 atatagtgga ttaacaaaaa ccagtacggc gttgccccgc cttgccgtac tatgttgtac
     2701 tgtctgcggc ttcgtcgcct tgtcctgatt tttgttaatc cactataacg cggcatacaa
     2761 ttgaaagggc agcgtggcgt gcctgctttt tccgagcggt caaaaaaatc agccctcgga
     2821 aaacgcggtt tgcaaaatgc aaaccgcccg taacgccgcc cgtatgattg ttttgccgcg
     2881 ccgatacttt gcgccacacc catcccgaca aggaaaaata atgatgaaac cgcacaacct
     2941 gttccaattc ctcgccgttt gctccctgac cgtcgccgtc gcttccgcac aggcgggcgc
     3001 ggtggacgcg ctcaagcaat tcaacaacga tgccgacggt atcagcggca gcttcaccca
     3061 aaccgtccaa agcaaaaaga aaacccaaac cgcgcacggc acgttcaaaa tcctgcgccc
     3121 gggcctcttc aaatgggaat acactttgcc ctacaaacag actattgtcg gcgacggtca
     3181 aaccgtttgg ctctacgatg ttgatttggc acaagtgacc aagtcgtccc aagaccaggc
     3241 catcggcggc agccccgccg ccatcctgtc gaacaaaacc gccctcgaaa gcagttacac
     3301 gctgaaagag gacggttcgt ccaacggcat cgattatgtg cgggcaacgc ccaaacgcaa
     3361 caacgccggc taccaataca tccgcatcgg cttcaaaggc ggcaacctcg ccgccatgca
     3421 gcttaaagac agcttcggca accaaacctc catcagtttc ggcggtttga ataccaatcc
     3481 ccaactctcg cgcggcgcgt tcaagtttac cccgcccaaa ggcgtggacg tgttgagcaa
     3541 ctgatgccgg ccgccccgat gccgtctgaa cgccgccgag gcttcagacg gcattttcac
     3601 gcaggcggaa caatgtcccg cattaccgcc cgatcgggca acggaacggc aaatccgtga
     3661 aaattaacgg ttgcgccccg gctgtttttg ccgtttaatg caaaccttgc tgcaccaagg
     3721 gccaagaaag ccgaccggcc gcccccacag cttccgatgc aggcggcccg tccgtccctg
     3781 caatgttttt tatttttgaa cgaaaggtcg aaaaccatga aaaaaacact ggtggcggca
     3841 atcctgagcc ttgccttgac tgcgtgcggc ggcggaagcg ataccgccgc ccaaaccccc
     3901 tccgccaagc ccgaagccga acaatcgggc aaactcaaca tctacaactg gtcggattat
     3961 gtcgatcccg aaaccgtcgc cgcctttgaa aaagaaaccg gcattaagat gcgttccgac
     4021 tattacgaca gcaacgaaac actggaggca aaagtcctga ccggcaaatc cggctacgac
     4081 ctgaccgcgc cgtccatcgc caacgtcggc cggcaaatca aagcgggcgc gtatcagaaa
     4141 atcgacaagg cgcaaatccc ccattacggc aacatcgata aagatttgct gaaaatgatg
     4201 gaagccgtcg atccgggcaa cgaatacgcc gtcccctatt tctggggcat caacaccttg
     4261 gcaatcaaca cgcggcaggt gcaaaaggca ttgggtacgg acaagctgcc cgaaaacgag
     4321 tgggatttgg tgttcaaacc cgaatacacc gccaaactca aatcctgcgg catcagctat
     4381 ttcgacagcg caatcgaaca gattcccttg gcgttgcact atttgggcaa agaccccaac
     4441 agtgaaaatc ccgaagacat caaagccgcc gtcgatatga tgaaagccgt ccggggcgac
     4501 gtgaaacgct tcagctcttc cggctatatc gacgatatgg cggcgggcaa cctgtgtgcc
     4561 gccatcggtt acggcggcga tttgaacatt gccaaaaccc gtgccgaaga agccgcaaac
     4621 ggcgtggaaa tcaaagtatt gaccccgaaa accggcgtag gcgtgtgggt ggattccttt
     4681 atgattccgc gcgacgcgca aaacgttgcc aacgcccacc gctatatcga ctacacgctc
     4741 cggcccgagg tggctgcgaa aaacggcagc ttcgttacct acgcgcccgc cagccgtccc
     4801 gcgcgcgagc tgatggatga aaaatacacc tccgacgcat cgattttccc gaccaaagaa
     4861 ctgatggaaa aaagtttcat cgtatcaccc aaatccgcag aatcggtcaa actgggcgtg
     4921 aagctgtggc aagggctcaa agcgggcaaa taaccggaat ccctgccgtc tgaaaccttt
     4981 cgggcggcag gaaacggcgt gtccgcatta agtcaggatt aggattattt agaaagatga
     5041 gatggatatg aatttaagta ttgtcgttcc tatttataat gtcgaaagtt atttggaagc
     5101 gtgtttaaat tctatagaac ctatattaag taatgaaaat gtcgaactta ttcttgtgaa
     5161 tgacgggtca aaagacggaa gtgaagatat atgttataaa tatatagata aaatatcaaa
     5221 caccaaacac caaatatata tatcaggata accaaggatt gtcggaggcg agaaataccg
     5281 gaa
//
LOCUS       DAXFZM010000108         5191 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.109, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000108 DAXFZM010000000
VERSION     DAXFZM010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5191)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5191)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5191
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.109"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            334..1911
                     /gene="lpt3"
                     /locus_tag="ACFJAG_001925"
     CDS             334..1911
                     /gene="lpt3"
                     /locus_tag="ACFJAG_001925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipooligosaccharide phosphoethanolamine
                     transferase"
                     /protein_id="HFC3981140.1"
                     /translation="MMKKSLFVLFLYSSLLTASEIAYRFVFGIETLPAAKMAETFALT
                     FVIAALYLFARYKATRLLIAVFFAFSIIANNVHYAVYQSWMTGINYWLMLKEVTEVGS
                     AGASMLDKLWLPALWGVAEVVLFCSLAKFRRKTHFSADILFAFLMLMIFVRSFDTKQE
                     HGISPKPTYSRIKANYFSFGYFVGRVLPYQLFDLSKIPVFKQPAPSKIGQGSIQNIVL
                     IMGESESAAHLKLFGYGRETSPFLTRLSQADFKPIVKQSYSAGFMTAVSLPSFFNVIP
                     HANGLEQISGGDTNMFRLAKEQGYETYFYSAQAENQMAILNLIGKKWIDHLIQPTQLG
                     YGNGDNMPDEKLLPLFDKINLQQGRHFIVLHQRGSHAPYGALLQPQDKVFGEADIADK
                     YDNTIHKTDQMIQTVFEQLQKQPDGNWLFAYTSDHGQYVRQDIYNQGTVQPDSYIVPL
                     VLYSPDKAVQQAANQAFAPCEIAFHQQLSTFLIHTLGYDMPVSGCREGSVTGNLITGD
                     AGSLNIRNGKAEYVYPQ"
     gene            1977..>5191
                     /locus_tag="ACFJAG_001926"
     CDS             1977..>5191
                     /locus_tag="ACFJAG_001926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3418 domain-containing protein"
                     /protein_id="HFC3981141.1"
                     /translation="MQNMKNQVRGSGMDARSNPANVSDGLQNSSGHIGTNTRYRLTKL
                     GEQMARLPIDPKIARILLAAKKHDCMAEILVIASALSIQDPRERPLEARDAAAKAHER
                     FTDKQSDFLTYLNIWDSFQRERDKGLSNKQLVQWCRQYFLSHLRMREWRELHHQLAQT
                     AIEMGLTTKEAAFRRPPEVKQLTSSENAGDQDLSAKLKQKQLDKKQHRTQIRATKEAG
                     YEQIHRALLTGLIANVGMKSPDSNDYTGARGSRFHLFPASALFKAKPKWVMAAELVET
                     TRLYARDVAVIQPEWIEQEAPHLVRYHYFEPHWEQKRGEVVASERVTLYGLAVLPRRP
                     VSYGKVAPEEAREIFIRSALVAQEYDLKADFFVHNKKLIKEITELEHKSRKQDVLVDD
                     EALFAFYHERLPDFYMADSVSEGLCPANPQQTTPSPVGEGWGEGKTVAAQTNFSATSA
                     SPLPNPLPQEREQSPSVSTVSGSLKTMSCEARLNFCEAKTKTESSLHSQRLSENYTPP
                     FSDGLRPANPQQTTPSPVGEGWGEGKTVAAQTNFSATAANPLPQEREQSASALTVSDD
                     PKPKKQPASQKGRLKPLPLADIRTFEAWLKTAERDNPRLLFLSRDDLMQHAAAHITEE
                     QFPKHWQTADGKFKLSYRFEPHHPLDGVTLTLPLTVLNRISPAALEWLVPGMIREKIQ
                     LQIKALPKQIRRICVPVPEFITQFLSQNPDRNAPILPQLAQAIAKTAGDIRILEQINQ
                     DEWAAFRLPEHCYFNLRIIDDGGQELAMGRDLIQIQQQLGKAATTTFRDNTQEFERDN
                     VTAWDIGILPESIKFARGKQQLTGYLGLQKEKDGRIALRLFDTSAAAGHAHRLGVIEL
                     MKLQLKEQVKDLNKGIQGFTQAAMLLKHINADTLRDDLTQAVCDRAFIGEDKLPRNEK
                     AFKEQIKRARSRLPAVKEALSRYLQETAAAYAELNGKLGKHPLTHLLRLRLQTLLAPG
                     FATRTPWAQWPRLPIYLKAMTLRLEKYSSNPARDAAREADIQELEQMWQEKTDGLAKQ
                     GQPVSDGLAAFKWMIEELRVSLFAQELKTPYPVSVKRLLKM"
BASE COUNT         1401 a         1546 c         1211 g         1033 t
ORIGIN      
        1 aagatgaggt tgaaaattat ttaaaaaatt ttgtgaataa aaaaaatacg cactataaaa
       61 gactactatg tatgttcgat tataaaaaat atgcggatac tgtctaaact ctaaaaaata
      121 aggtcgggca tttatgtccg acctacaaaa ctatgcaaaa cactaaaaat caagcacgca
      181 gctcaggcat tcatgcccaa cacaatccga caaatgacaa accactttca gacaacctcg
      241 ttttttgaaa aacaatctgt aaacagatag ctgctgaaga ataccgttgc cgagccccaa
      301 aacccgtcct gcaactttta ttgtgaactg cccattatga aaaaatccct tttcgttctc
      361 tttctgtatt catccctact taccgccagc gaaatcgcct atcgctttgt attcggaatt
      421 gaaaccctac cggctgcaaa aatggcggaa acgtttgcac tgacatttgt gattgctgcg
      481 ctgtatctgt ttgcgcgtta taaggcaacg cgtttgttga ttgcggtgtt tttcgcgttc
      541 agcattattg ccaacaatgt gcattacgcg gtttatcaaa gctggatgac gggtattaac
      601 tattggctga tgctgaaaga ggttaccgaa gtcggcagcg cgggcgcgtc gatgttggat
      661 aagttgtggc tgcctgcttt gtggggcgtg gcggaagtcg tgctgttttg cagccttgcc
      721 aagttccgcc gtaagacgca tttttctgcc gatatcctgt ttgccttcct aatgctgatg
      781 attttcgtgc gttcgttcga cacgaaacaa gagcacggta tttcgcccaa accgacatac
      841 agccgcatca aagccaatta tttcagcttc ggttattttg tcggacgcgt gttgccgtat
      901 cagttgtttg atttaagcaa gatccctgtg ttcaaacagc ctgctccaag caaaatcggg
      961 caaggcagta ttcaaaatat cgtcctgatt atgggcgaaa gcgaaagcgc ggcgcatttg
     1021 aaattgtttg gttacgggcg cgaaacttcg ccgtttttaa cccggctgtc gcaagccgat
     1081 tttaagccga ttgtgaaaca aagttattcc gcaggcttta tgacggcagt atccctgccc
     1141 agtttcttta acgtcatacc gcacgccaac ggcttggaac aaatcagcgg cggcgatacc
     1201 aatatgttcc gcctcgccaa agagcagggc tatgaaacgt atttttacag tgcccaggct
     1261 gaaaaccaaa tggcaatttt gaacttaatc ggtaagaaat ggatagacca tctgattcag
     1321 ccgacgcaac ttggctacgg caacggcgac aatatgcccg atgagaagct gctgccgttg
     1381 ttcgacaaaa tcaatttgca gcagggcagg cattttatcg tgttgcacca acgcggttcg
     1441 cacgccccat acggcgcatt gttgcagcct caagataaag tattcggcga agccgatatt
     1501 gcggataagt acgacaacac catccacaaa accgaccaaa tgattcaaac cgtattcgag
     1561 cagctgcaaa agcagcctga cggcaactgg ctgtttgcct atacctccga tcatggccag
     1621 tatgtgcgcc aagatatcta caatcaaggc acggtgcagc ccgacagcta tattgtgcct
     1681 ctggttttgt acagcccgga taaggccgtg caacaggctg ccaaccaggc ttttgcgcct
     1741 tgcgagattg ccttccatca gcagctttca acgttcctga ttcacacgtt gggctacgat
     1801 atgccggttt caggttgtcg cgaaggctcg gtaacaggca acctgattac gggcgatgca
     1861 ggcagcttga acattcgcaa cggcaaggcg gaatatgttt atccgcaata agcagcgtga
     1921 aaaccaataa agacaaattt agatgatgtc ggggaagatg cccgaccgac aagactatgc
     1981 aaaatatgaa aaaccaagta cgcggatcag gcatggatgc ccgatccaac ccggccaatg
     2041 tttcagacgg cctgcaaaac agttcgggcc atatcggtac caacacgcgc taccgcctga
     2101 ccaagctcgg cgaacaaatg gcgcgcctgc ccatcgatcc gaaaattgcg cgcattttgc
     2161 tggcggcgaa gaaacacgac tgcatggcgg aaatattggt gattgcgtct gcgctgtcga
     2221 ttcaagaccc gcgcgaacgg ccgctggaag cgcgcgatgc cgcggccaag gcgcatgaac
     2281 gctttaccga caagcaatcc gatttcctta cctacctgaa tatttgggac agtttccagc
     2341 gcgagcgcga caaaggtttg tccaacaagc agttggtgca atggtgccgt caatattttc
     2401 tgtcgcacct gaggatgcgc gagtggcgcg agctgcacca ccagcttgcc caaaccgcga
     2461 ttgaaatggg cttgaccacc aaagaagctg cgtttagacg acctcccgaa gtcaagcaac
     2521 tgacgtcgtc tgagaatgcg ggcgaccaag acctatctgc caaactcaaa caaaaacaac
     2581 tggataagaa acaacaccgc acccaaatcc gcgctaccaa agaagcgggc tacgaacaaa
     2641 tccaccgcgc cctgctcacc ggcctcatcg ccaacgtcgg catgaaatcg cccgacagca
     2701 acgactacac cggcgcgcgc ggcagccgct tccacctttt ccccgcctcc gccctgttca
     2761 aagccaagcc caaatgggtg atggcggcag aattggttga aaccacgcgc ctttacgcgc
     2821 gcgacgtcgc cgttatccag cccgaatgga tcgagcagga agccccgcac cttgtccgct
     2881 accattattt cgagccgcac tgggaacaaa aacgcggcga agtcgtcgcc agcgaacgcg
     2941 taacgcttta cggcctggcc gtattgccgc gccgccccgt gtcttacggt aaagttgcgc
     3001 ccgaagaagc acgtgaaatc tttatccgca gcgcgttggt ggcgcaggaa tacgatttga
     3061 aagcggattt ttttgtccac aacaaaaagc tgattaaaga aattaccgaa ctcgaacaca
     3121 aatcgcgcaa gcaagacgta ttggtcgatg acgaagccct gtttgcgttt tatcacgaac
     3181 ggctgcccga tttttatatg gcggattcgg tttcagaggg cctgtgtcct gcaaatccgc
     3241 agcaaaccac cccctccccc gtgggggaag gctggggaga gggcaaaaca gttgccgcac
     3301 aaaccaactt ttccgcaacc tcagcaagcc ctctccctaa ccctctccca caggagaggg
     3361 aacagagtcc ctcagtttca acggtttcag gcagtctgaa aacaatgtct tgcgaagcaa
     3421 ggctgaattt ctgcgaagct aaaactaaaa ccgaaagcag cctgcactcc caaaggctat
     3481 ctgaaaacta caccccgcca ttttcagacg gcctgcgtcc tgcaaacccc cagcaaacca
     3541 ccccctcccc cgtgggggag ggctggggag agggcaaaac agttgccgca caaaccaact
     3601 tttccgcaac cgcagcaaac cctctcccac aggagaggga acagagtgcc tcggctttaa
     3661 cagtttcaga tgaccccaaa cccaaaaagc agcctgcatc tcaaaaaggc cgtctgaaac
     3721 ctttgcccct tgccgatatc cgcacctttg aagcctggct caaaaccgcc gagcgcgaca
     3781 acccgcgcct gttgttcctc agccgcgacg acctcatgca gcacgccgcc gcgcacatca
     3841 ccgaagaaca attccccaaa cactggcaga ccgcagacgg caaattcaaa ctcagctacc
     3901 gcttcgagcc gcaccacccg ctcgacggcg ttaccctcac cctgccgctc accgtgctca
     3961 accgcatcag ccccgccgcc ctcgaatggc tcgtgcccgg catgatacgc gaaaaaatcc
     4021 agctacaaat caaagcactg cccaaacaaa tccgccgcat ctgcgtaccc gtacccgaat
     4081 tcatcaccca atttttaagc caaaaccccg accgcaacgc ccccatcctg ccccagctcg
     4141 cccaagccat cgccaaaacc gcaggcgaca tccgcatact cgagcaaatc aaccaagacg
     4201 aatgggccgc gttcaggctg cccgaacact gctatttcaa cctccgcatc atcgacgacg
     4261 gcggacaaga gttagccatg ggtcgcgatt taatccaaat ccaacaacaa cttggcaaag
     4321 ccgccaccac caccttccgc gacaacaccc aagaattcga gcgtgacaac gttaccgcat
     4381 gggacatcgg catcctgccc gaatccatca aattcgcccg cggcaaacaa cagctcaccg
     4441 gctacctcgg cctgcaaaaa gaaaaagacg gccgcatcgc cctgcgcctg ttcgacacgt
     4501 ctgccgccgc cggacacgcc cacagattag gcgtgattga actcatgaaa ctacaactaa
     4561 aagaacaagt taaagatctg aacaaaggca tccaaggctt cacccaagcc gccatgctgc
     4621 tcaaacacat caacgccgac accctgcgcg acgacctcac ccaagccgtc tgcgaccgcg
     4681 cctttatcgg cgaagacaag ctgccgcgca acgaaaaagc cttcaaagaa caaatcaaac
     4741 gcgcccgcag ccgcctgccc gccgtcaaag aagccctcag ccgctacctg caggaaaccg
     4801 cagccgccta cgccgaactg aacggcaaac tcggcaaaca cccattgacc cacctcctaa
     4861 gactacgcct gcaaaccctg cttgcacccg gcttcgccac ccgcaccccg tgggcacaat
     4921 ggccgcgcct ccccatctac ctcaaagcca tgaccctgcg cctcgaaaaa tacagcagca
     4981 accccgcccg cgacgcagcc cgcgaagccg atatccaaga gctggaacaa atgtggcagg
     5041 aaaaaactga cggcttggcg aaacaaggac agcccgtttc agacggcctc gccgcgttta
     5101 aatggatgat tgaagaattg agagtgtcgc tgttcgcgca ggagttgaag acgccgtatc
     5161 cggtgtcggt aaagcggctg ttgaagatgt g
//
LOCUS       DAXFZM010000109         5040 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.110, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000109 DAXFZM010000000
VERSION     DAXFZM010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5040)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5040)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5040
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.110"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..541
                     /locus_tag="ACFJAG_001927"
     CDS             <1..541
                     /locus_tag="ACFJAG_001927"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HFC3981142.1"
                     /translation="PQPRETAALRAKYGFADHETVFLFPSTGHTRKGLELLADFFEQT
                     ELPVKLAVAGSPLPRPMKNVVGLGFCTDMPELYRAADFTIMASLYEPFGLVGVESALC
                     GTRVVLSENMACTEVMNEEAGFFFSRQNPETLAQAVAQAVSLKKQGGHRLSDPMRALN
                     YNPSLSHHIDRLTDMLASV"
     gene            complement(608..2260)
                     /locus_tag="ACFJAG_001928"
     CDS             complement(608..2260)
                     /locus_tag="ACFJAG_001928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LTA synthase family protein"
                     /protein_id="HFC3981143.1"
                     /translation="MVAYAFLFLFVTAVVLLIVRSHYRWTYFFASALFVFLAGGMLML
                     TAQWQRALNFASVWFVVLILFHRLKIHYYKQPLLISDFLLIADWRNWETLFHYKEAVI
                     GMAGLLALAAYAVFGWSGADSLGMPWRWAGAVLFAAAFVSVRHFSKHPGAVKTWLDSL
                     PDDGRDVFLNLPMSCRAVFFQVPVFEGDGEAFARQMPSETRPYGMSDEKPDIVVTLME
                     STLDPHCFDFAAAKIPDLKMFGRQEDTVFSSPLRVHTFGGATWKSEFAFLAGVPSTDF
                     GALASGVFYSVVPHLQTGFVRNLREHGYFCVALSPFTKGNYNAKAAYDHFGFNLMFQP
                     QDLGYPAPMGKNLWHISSEEMMQYARMILEKRHPDLENVRQPMFVYVLTMKEHGPYRT
                     DTDNVFDLDAPDLNAKTVSALNDYIGRIADLDKAVESFDRYLHERGKPFVFGYFGDHQ
                     VPFEGVSVRKKWDYAQPDYVTQFAVRSNIAGGFVQRQDFLDLAFAGGVLMEAAGLEAK
                     DGFMRANMAMRGLCGGGLEDCPNRELVGNYRNYLYDVLKIAR"
     gene            2403..2966
                     /gene="gmhB"
                     /locus_tag="ACFJAG_001929"
     CDS             2403..2966
                     /gene="gmhB"
                     /locus_tag="ACFJAG_001929"
                     /EC_number="3.1.3.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1,7-bisphosphate
                     7-phosphatase"
                     /protein_id="HFC3981144.1"
                     /translation="MKLIILDRDGVINRDRDDFVKSVDEWIPVEGSMDAVAFLTQAGC
                     TVAVATNQSGIGRKYFTVQDLTEMHAKMHRLIRQAGGEIDGIWFCPHTGADGCNCRKP
                     KPGMIEDILERFNAQASETWLVGDSLRDLQAIDAVGGKPALVLTGKGKKTLSQHGHEL
                     PGHTQVFDTLLDFSQYIMQENAAPQAD"
     gene            2996..3739
                     /locus_tag="ACFJAG_001930"
     CDS             2996..3739
                     /locus_tag="ACFJAG_001930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HFC3981145.1"
                     /translation="MLIIRNLIYWLILCSSLIFLFPFMLLASPFRDGAHKMARVWVGI
                     LNWSLKHIVGLKYRIIGAEHIPDRPSVICAKHQSGWETLALQEIFPPQVYVAKRELFK
                     IPFFGWGLKLVKTIGIDRNNRREANEQLIKQGLARKNEGYWITIFPEGTRLAPGKRGK
                     YKLGGARMAKMFEMDIVPVALNSGEFWPKNSFLKYPGEITVIICPTIPHASGSEAELM
                     EKCEHLIETQQPLISGAGPFAAEMPSETA"
     gene            3736..4425
                     /locus_tag="ACFJAG_001931"
     CDS             3736..4425
                     /locus_tag="ACFJAG_001931"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SprT family zinc-dependent metalloprotease"
                     /protein_id="HFC3981146.1"
                     /translation="MTSLIHTLSDGIELTVEINRRAKKNLIIRPIGTHTVRISVPPCF
                     SVSALNRWLYENEAVLRRTLAKTPPHNTANRLPEHIWFHGRQLALTAHQDTQILLMPS
                     EILVPEGAPEKQLALLRDFLERQAHSYLIPRLERHARATQLFPASSSLTSAKTFWGVC
                     RKTTGIRLNRRLVGAPEYVADYVCIHELCHLAHPDHSPAFWELTRRFAPYTPEAKQWI
                     KIHGRELFALG"
     gene            complement(4489..4680)
                     /locus_tag="ACFJAG_001932"
     CDS             complement(4489..4680)
                     /locus_tag="ACFJAG_001932"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981147.1"
                     /translation="MPSENLSDGIFAGKSVEDFAPAQAFHTARRIGRVSEGRCEMKRC
                     GRRGCRHPAPNRRQSVIAV"
BASE COUNT         1233 a         1633 c         1211 g          963 t
ORIGIN      
        1 tccacaacct agagaaactg ccgccctgcg cgccaaatac ggttttgccg accatgaaac
       61 cgttttccta ttcccatcga ccggccacac gcgcaaaggc ctggaactgc tcgccgactt
      121 tttcgaacaa accgaactgc ccgtcaagct cgccgttgcc ggttcaccgc ttccccgccc
      181 gatgaaaaac gtcgtcggac tgggcttctg caccgatatg cccgaactct accgcgccgc
      241 cgactttacc attatggcat ccctgtacga acccttcggg ctggtcggtg tcgaatccgc
      301 cctatgcggc acacgcgtcg tcctctccga aaacatggca tgtacagagg tcatgaacga
      361 agaagccgga ttctttttct cacgacaaaa cccggaaacc ctcgcgcaag ccgttgccca
      421 agccgtcagc cttaaaaaac agggcggaca ccgcctgtcc gacccgatgc gggcgctgaa
      481 ctacaacccg tccctgtcgc accacatcga ccgactgacc gacatgctgg catccgtata
      541 acaaaatgcc gtctgaacgg gttttcagac ggcattttcg caaccgttgc agccgtgcgg
      601 caaaaagcta acgggcaatt ttcaaaacgt cgtacagata gttgcggtaa tttccgacca
      661 actcccggtt cgggcagtct tccaaccctc cgccgcacaa accgcgcatc gccatattcg
      721 cacgcatgaa gccgtctttg gcttccaaac cagccgcctc catcagtacg ccgcctgcaa
      781 aggcaaggtc gaggaaatcc tgccgctgta cgaatccgcc ggcaatattg ctcctgacgg
      841 caaactgcgt tacataatcc ggctgagcgt aatcccattt cttcctgacg gacacgccct
      901 caaacggtac ctgatgatcg ccgaaataac cgaaaacaaa gggtttgccg cgttcgtgca
      961 gataacggtc gaaactttcc accgctttgt ccaaatcggc aatgcgcccg atgtagtcgt
     1021 taagcgcgga tacggttttc gcattcaaat cgggcgcatc caaatcaaac acattgtcgg
     1081 tatccgtccg atacggcccg tgctccttca tggtcagcac atatacgaac atcggctgcc
     1141 gcacgttttc caaatcggga tggcgttttt cgagaatcat ccgcgcatac tgcatcattt
     1201 cctcactgga aatgtgccac aggtttttgc ccatcggcgc gggatagccc aaatcttgcg
     1261 gctggaacat cagattaaag ccgaaatggt catatgctgc cttggcattg tagttgccct
     1321 tggtaaacgg cgagagcgcc acgcaaaaat aaccgtgttc gcgcaggttg cggacaaaac
     1381 cggtctgcaa atgcggtacg accgaataaa acacgccgct tgccaacgcg ccgaaatctg
     1441 tggacggaac acccgccaaa aacgcaaatt cggacttcca cgttgcgccg ccgaaagtat
     1501 gcacgcgcaa aggtgaggaa aatacagtat cttcctgccg tccgaacatt ttcaaatcgg
     1561 gaattttggc ggcggcaaaa tcgaaacagt gcggatcgag cgtcgattcc atcagggtaa
     1621 cgacaatatc gggcttttca tccgacatgc cgtacggccg ggtttcagac ggcatctgcc
     1681 tggcaaacgc ttccccgtcg ccctcgaaca cgggtacttg gaaaaacacc gcccgacagg
     1741 acatcggcag gttcaaaaac acgtcgcgcc cgtcgtccgg cagcgaatcc agccacgtct
     1801 ttaccgcgcc ggggtgcttg gaaaaatgcc gcaccgacac gaacgccgcc gcaaacagaa
     1861 ccgcgcccgc ccaacgccac ggcataccca aagaatccgc accgctccag ccgaaaaccg
     1921 catatgccgc caaagccagc agccccgcca taccgataac cgcttcctta taatgaaaca
     1981 gcgtttccca attccgccag tcggcaatca gcaaaaagtc ggaaatcaac agcggctgtt
     2041 tgtaataatg gattttcagc ctgtggaaca gtatcagcac cacaaaccag accgaagcga
     2101 aattcaaggc gcgctgccac tgcgccgtca acatcagcat accgcccgcc aaaaagacaa
     2161 acagcgccga cgcgaaaaaa tacgtccagc ggtagtgcga cctgacaatc agcagcacca
     2221 ccgccgttac aaacaaaaat aggaaagcat aggcaaccat cccgccccac tcctcaaaac
     2281 ggcatacctg tgccgttgcg aattattatc gaaagcgtgc attataatgc agcacaggcg
     2341 catttccacc gatatttcag tataatgcca tccccgaacc cgcccaaccc aaaggaaccg
     2401 tgatgaaact catcattctc gaccgcgacg gcgtcatcaa ccgggaccgc gacgacttcg
     2461 tcaaatccgt tgacgagtgg atacctgtcg aaggcagcat ggatgcggtg gcattcctga
     2521 cgcaggcagg ctgcaccgtt gccgtcgcca ccaaccaatc cggcatcggc cgcaaatatt
     2581 ttaccgttca agacctcacc gaaatgcatg ccaaaatgca ccgcctcatc cgtcaggcgg
     2641 gcggggaaat cgacggcatc tggttctgcc cgcataccgg cgccgacggc tgcaactgcc
     2701 gcaagcccaa accgggcatg attgaagaca tcctcgaacg cttcaacgcc caagcttcgg
     2761 aaacttggct ggtcggcgac agcctgcgcg atttgcaggc aatcgatgcc gtcggcggaa
     2821 aacccgcgct ggttctgacc ggaaaaggca aaaaaacgct ctcccaacac ggacacgaat
     2881 tacccggaca cacacaggtt ttcgataccc tgctcgattt ctcacaatac atcatgcagg
     2941 aaaacgccgc accgcaagcc gactgaacat accgcatttc cgacaaggca aaaccatgct
     3001 catcatccgc aacctgattt actggctgat actctgttcc agcctgattt tcctctttcc
     3061 ctttatgctg ctcgcctcgc ctttccggga cggggcgcac aagatggcgc gggtctgggt
     3121 cggcatcctc aactggtcgc tcaaacacat cgtcgggctc aaataccgca tcatcggcgc
     3181 ggaacacatt ccggaccgcc cctccgtcat ctgcgccaaa caccaaagcg gctgggaaac
     3241 gctcgcgctc caagagattt ttccgccgca ggtttacgtt gccaagcgcg agttgttcaa
     3301 aatccccttt ttcggctggg gcttgaaact ggtcaaaacc ataggcatag accgcaacaa
     3361 ccgccgcgaa gccaacgaac agctcataaa acagggtttg gcgcgcaaaa acgaaggtta
     3421 ttggattacc attttccccg aaggcacgcg ccttgcgccc ggaaaacgcg gcaaatacaa
     3481 gctcggcggc gcgcgcatgg cgaaaatgtt tgagatggac atcgtccccg tcgccctcaa
     3541 cagcggcgaa ttttggccga aaaattcctt tctgaaatat ccgggggaaa tcaccgtcat
     3601 catctgtccg accatcccgc acgcaagcgg cagcgaagcc gaattgatgg aaaaatgcga
     3661 acacctcatc gaaacgcaac aaccgcttat ttccggcgca ggcccgtttg ccgccgaaat
     3721 gccgtctgaa accgcatgac ctccctgatt cacacccttt cagacggcat agaactgacc
     3781 gtcgaaatca accgccgtgc caagaaaaac ctgattatcc gccctatcgg cacacatacc
     3841 gtccgcatca gcgtcccacc ctgcttctcc gtctccgccc tcaaccgctg gctgtatgaa
     3901 aacgaagccg tcctgcggcg gacactggcg aaaacaccgc cgcacaatac ggcaaaccgg
     3961 ctgcccgaac atatctggtt ccacggcagg cagcttgccc ttaccgccca tcaagacacg
     4021 caaatcctgc tgatgccgtc tgaaatcctc gtccccgaag gcgcgcccga aaaacagctt
     4081 gcgctgctgc gggacttttt ggaacggcag gcgcacagtt acctgattcc ccgtctcgaa
     4141 cgccacgccc gcgccacgca actgttcccc gcctcctcct cgctgacctc cgccaaaacc
     4201 ttctggggcg tgtgccgcaa aaccacaggc atacgcctca accggcggct ggtcggcgca
     4261 cccgaatacg ttgccgacta tgtctgcata cacgaactct gccacctcgc ccatcccgac
     4321 cacagccccg ccttttggga actgacccgc cgcttcgccc cctacacgcc cgaagcaaaa
     4381 cagtggatca aaatccacgg cagggagctt ttcgccttgg gctgacgcag ccccggaccg
     4441 acgctttcag acggcatccg tgccggaaca ggcacgcgcc cgcccgattc aaaccgcgat
     4501 gacgctttgc cgccggttcg gggcaggatg gcggcatccg cgccgtccgc accgtttcat
     4561 ttcacaccgc ccttccgaaa cccgcccgat ccgacgtgcg gtatgaaacg cttgagccgg
     4621 cgcgaagtct tctactgatt tgcccgcgaa aataccgtcc gaaaggtttt cggacggcat
     4681 ttttttgcgt tttcctggat ggcggcggat tcgtaaaagg cgggcagggt ggattgtagg
     4741 atgggttgag gcctgccaaa tccaccaact ctaccgaata cgccgccgtc attcccgcgc
     4801 aggcgggaat ttggttttgt cggtgcggaa acttatcgga taaaacggtt tcttagattc
     4861 cacgtcctag attcccgcct gcgcgggaat gacggttcgg gtatttctga cgattcatcg
     4921 agccgtagca actgtatttt ccaccccgtc gggcaaaaat accaaaactc aaatcaagcc
     4981 gtccgaatac cgttttcggc ggtatcgttt gcggcaaaat aatcacgcat ccgggcattc
//
LOCUS       DAXFZM010000110         4864 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.111, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000110 DAXFZM010000000
VERSION     DAXFZM010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4864)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4864)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4864
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.111"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(33..1595)
                     /gene="aceF"
                     /locus_tag="ACFJAG_001933"
     CDS             complement(33..1595)
                     /gene="aceF"
                     /locus_tag="ACFJAG_001933"
                     /EC_number="2.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045254 - pyruvate dehydrogenase complex
                     [Evidence IEA];
                     GO_function: GO:0004742 - dihydrolipoyllysine-residue
                     acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyllysine-residue acetyltransferase"
                     /protein_id="HFC3981148.1"
                     /translation="MSIVEIKVPDIGGHESVDIIAVEVKAGDTIAVDDTLITLETDKA
                     TMDVPADAAGVVKEVKVKVGDKISEGGVILTVETGAAAAEAAPAAAAEAQPAPAAAGG
                     ATVQVAVPDIGGHTDVDVIAVEIKVGDTVAEDDTLITLETDKATMDVPCTAAGVVKAV
                     SLKVGDKVSEGSAIIEVETAGSAAAAPAPAAQAAAPAAVPTSASPAAAKIDEAAFAKA
                     HAGPSARKLARELGVDLGQVKGSGLKGRIMGDDIKAFVKSVMQGGAAKPAAAGASLGG
                     GLDLLPWPKVDFSKFGNVEVKELSRIKKISGQNLSRNWVVIPHVTVHEEADMTELEEF
                     RKQLNKEWEREGVKLSPLAFIIKASVSALKAFPEFNASLDGDNLVLKNYFNIGFAADT
                     PNGLVVPVIKDVDQKGLKQISQELTELSKKAREGKLKPQEMQGACFTISSLGGIGGTG
                     FTPIVNAPEVAILGVCKSQIKPVWNGKEFAPRLMCPLSLSFDHRVIDGAAGMRFTVFL
                     ANLLKDFRRITL"
     gene            complement(1745..4408)
                     /gene="aceE"
                     /locus_tag="ACFJAG_001934"
     CDS             complement(1745..4408)
                     /gene="aceE"
                     /locus_tag="ACFJAG_001934"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045254 - pyruvate dehydrogenase complex
                     [Evidence IEA];
                     GO_function: GO:0004738 - pyruvate dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring),
                     homodimeric type"
                     /protein_id="HFC3981149.1"
                     /translation="MSTQLHDVDPIETQEWLDALSSVLEYEGGERAQYLLENLLKYCR
                     DKGVRMPHGTTTPYLNTVSVENEKGIPGDQNIEHRIRAFVRWNAAAIVLRAGKKDLEL
                     GGHIASFQSAATMYEVGFNHFWKAKGEGEEGDLVFFQGHVAPGIYARAFVEGRLTEDQ
                     LNNFRQEVDGHGLPSYPHPHLLPDFWQFPTVSMGLGPIMAIYQARFLKYLESRGLAKT
                     KGRKVWCFCGDGEMDEPESQGAIALAAREGLDNLIFVINCNLQRLDGPVRGNGKIIQE
                     LEGNFAGAGWNVVKVIWGRRWDRLLAKDKDGILRQRMEECLDGDYQTYKSKDGAYVRE
                     HFFNTPELKALVADMTDEQLWALNRGGHDPQKVYNAYDRAANHADGKPTVILAKTIKG
                     YGMGASGEGQNVAHQAKKMDKASLKQFRDRFDIPVTDEQIESGDLPYLTFAPDTEEYK
                     YLHARRDALGGYLPQRKPTQEVLEVPELSAFDAQLKSSGEREFSTTMAFVRILSTLLK
                     DKKIGKRVVPIVPDESRTFGMEGMFRQYGIWNPKGQQYTPQDKDQLMFYKESVDGQIL
                     QEGINEPGAMADWIAAATSYANSDFAMIPFYIYYSMFGFQRIGDLAWAAGDMHARGFL
                     LGGTAGRTTLNGEGLQHEDGHSHIQADLIPNCVSYDPTFQYEVAVIVQDGLRRMYANN
                     EDVFYYITLMNENYTHPDMPEGAEQDILKGMYLLKAGGKGDKKVQLMGSGTILQEVIA
                     GAELLKADFGVEADIWSCPSFNLLHRDAIETERFNRLHPLEAEKVPFVTSQLQGHDGP
                     VIAATDYIRSYADRIRAYIPNDYHVLGTDGFGRSDSRANLRRFFEVDRYNVAVAALAA
                     LAEQGKVSKETVQQAIEKYGIKADSAPSWKR"
BASE COUNT         1015 a         1202 c         1372 g         1275 t
ORIGIN      
        1 attatcagac tgcttgagag ggatgtttta ttttataagg taatgcggcg gaagtctttc
       61 aacaggttcg ccaggaatac ggtgaagcgc ataccggcgg caccgtcgat gacgcggtgg
      121 tcgaaggaca ggctcaacgg gcacatcagg cgcggggcaa actctttgcc gttccaaacc
      181 ggtttgattt gggatttgca cacgcccaag atagcgactt cgggagcgtt cacaatcggc
      241 gtgaaacctg tgccgccgat gccgcccaag ctggaaatgg taaagcacgc gccttgcatt
      301 tcttgcggtt tgagcttgcc ttcgcgggct tttttggaca attcggtcaa ttcttggctg
      361 atttgtttca agcctttttg atccacgtct ttgatgacgg gaacaaccaa gccgttcggc
      421 gtatcggctg cgaaaccgat gttgaagtag tttttcagca ccaggttgtc gccgtccaaa
      481 gaagcgttga attcggggaa ggctttcagc gcggaaacgg aggctttgat gatgaacgcc
      541 aacggggaca gtttcacgcc ttcgcgttcc cattctttgt tcagctgttt gcggaattct
      601 tccagttcgg tcatatccgc ttcttcgtgt acggtaacgt gaggaatcac cacccagttg
      661 cgggacaggt tttgaccgga gattttctta atgcgggaca attctttaac ttcgacattg
      721 ccgaatttgg agaagtccac tttaggccac ggcagcaagt ccagaccgcc gcccaaagat
      781 gcgccggctg cggcaggttt tgccgcgccg ccctgcatta cggatttcac aaaggctttg
      841 atgtcgtctc ccatgatacg gcctttcaag ccgctacctt tgacttggcc caaatccacg
      901 cccaattcgc gcgccagttt gcgtgcggaa ggaccggcgt gtgctttggc gaaagcggct
      961 tcatcgattt tggcagcggc aggcgaggca gatgtaggca cggcggcggg tgcggcagct
     1021 tgagcggcag gcgcaggagc tgctgcggca gagccggcgg tttccacttc gataatggca
     1081 gagccttcgg acactttgtc gccgactttt aaggatacgg ctttaacgac accggcagcg
     1141 gtacaaggta cgtccattgt cgctttatcg gtttccaaag taatcagcgt gtcgtcttcg
     1201 gcaacggtgt cgccaacttt gatttcaacg gcgattacat ctacatcggt atggccgccg
     1261 atatcgggaa cggctacttg aacggttgca ccgcctgcgg cagcgggtgc aggttgtgct
     1321 tcggcggcag cagccggggc ggcttcggca gcggcggcac cggtttcaac ggtcaaaatt
     1381 acgccgcctt cggagatttt gtcgccgact ttgactttta cttctttcac gacaccggcc
     1441 gcatcggcag gcacatccat cgtggctttg tcggtttcca gtgtaatcag ggtgtcgtca
     1501 acggcgatgg tgtcgcccgc tttaacttct acggcgatga tgtcgacgct ttcgtgaccg
     1561 ccgatatcgg ggactttgat ttctacgata ctcatttgag ttcctttaat ctttttcagt
     1621 tggatgccgt ctgaaagctg cttcaggcgg catcggtacg gtttgtctgt tcaaaccatt
     1681 cgggcattcg gttttcagac ggcctgatgt tggcatgaaa caaacaggcc gtctgaaaca
     1741 tcaatcagcg tttccagcta ggggctgaat cggctttgat gccgtatttc tcaatggctt
     1801 gttgaacggt ttctttgctg actttgcctt gttccgccaa tgcggccaat gctgccacgg
     1861 caacgttgta gcggtccact tcaaagaagc ggcgcaggtt ggcgcggctg tcggaacggc
     1921 cgaaaccgtc agtgcccaag acatggtagt cgttcgggat gtacgcgcgg atacggtcgg
     1981 catagctgcg gatatagtcg gtagcggcga taaccggacc gtcatgacct tgcagttggg
     2041 aagtaacgaa aggcactttt tcagcttcca gcggatgcag gcggttgaag cgttcggttt
     2101 cgatggcgtc gcggtgcagc aggttgaagg acgggcaaga ccagatgtcc gcttccacgc
     2161 cgaagtcggc tttcagcagc tcggcaccgg caatcacttc ttgcagaatc gtaccggaac
     2221 ccatcaattg gactttcttg tcgcctttgc cgccggcttt cagcaggtac atacctttga
     2281 ggatgtcttg ttccgcacct tccggcatat cgggatgggt gtagttctcg ttcatcaggg
     2341 tgatgtagta gaacacgtct tcattattgg catacatacg gcgcagaccg tcttgtacga
     2401 tgacggccac ttcgtattgg aaggtcgggt cataagatac gcagttcgga atcaggtcgg
     2461 cctggatgtg gctgtggccg tcttcgtgtt gcagaccttc gccgttcagc gtcgtacggc
     2521 cggcagtacc gcccagcagg aagccgcgcg cgtgcatatc gcccgccgcc caagccaagt
     2581 cgccgatacg ttggaaaccg aacatggagt agtagatgta gaacggaatc atcgcgaagt
     2641 cgctgttggc gtagctggtc gcagccgcaa tccagtcggc catcgcgccc ggttcgttaa
     2701 taccttcttg caagatttga ccgtcgacgg attctttgta gaacatcagt tggtctttat
     2761 cttgaggcgt gtattgttgg cctttgggat tccaaatacc gtattggcgg aacatacctt
     2821 ccatgccgaa agtacggctt tcgtcgggaa cgataggtac gacgcgtttg ccgatttttt
     2881 tgtctttcag caaagtggac aggatgcgga cgaatgccat cgtggtcgag aactcgcgtt
     2941 caccgctgga tttgagttgt gcgtcgaatg ccgacagctc gggcacttcc aatacttcct
     3001 gcgtcggttt gcgttgcggc aggtagccgc ccaaagcatc gcggcgtgcg tgcaggtatt
     3061 tgtattcttc cgtatcgggg gcaaaagtca ggtaaggcag atcgccgctt tcgatttgtt
     3121 cgtcggtaac cggaatgtca aagcggtcgc ggaattgttt cagggacgct ttgtccattt
     3181 ttttggcttg gtgggcaacg ttctgacctt cgccggatgc gcccataccg taacctttaa
     3241 tggttttcgc caagataacg gtaggtttgc cgtcggcatg gttcgctgcg cggtcgtagg
     3301 cgttgtacac tttttgagga tcgtggccgc cgcggttcaa tgcccagagt tgctcatcgg
     3361 tcatatcggc aaccaatgct ttcagttcgg gcgtattgaa gaagtgttcg cgcacatacg
     3421 cgccgtcttt ggatttgtaa gtttggtagt cgccgtccaa acattcttcc atacgttggc
     3481 gcaggatacc gtctttgtct ttcgccaaga ggcggtccca acggcggccc caaatgactt
     3541 tgacgacatt ccagccggca ccggcaaagt tgccttccaa ttcttggatg attttgccgt
     3601 tgccgcgcac cggaccgtcc aagcgttgca ggttgcagtt gatgacgaaa atcaggttgt
     3661 ccaagccttc gcgtgcagcc agcgcgattg caccttggga ttcgggttcg tccatttcgc
     3721 cgtcgccgca gaaacaccat actttacggc ctttggtttt tgccaagccg cgtgattcca
     3781 agtatttcag gaaacgcgcc tgataaatcg ccatgatggg gcccaagccc atggatacgg
     3841 tcgggaactg ccagaagtcg ggcaagaggt gggggtgtgg ataggaaggc agaccgtgtc
     3901 cgtccacttc ttggcggaag ttgttcagct ggtcttcggt cagacggcct tcgacgaatg
     3961 cgcgtgcata gatgcccggg gcaacgtgac cttggaagaa gaccaaatcg ccttcttcac
     4021 cttcaccttt ggctttccag aagtggttga aaccgacttc gtacatggtg gcggcagatt
     4081 ggaaagatgc gatgtgccca cccagttcca aatctttctt gccggcgcgc aatacgatgg
     4141 cggcggcgtt ccagcgtacg aatgcgcgaa tgcggtgttc gatgttttgg tcgcccggaa
     4201 tgcctttttc gttttcaacc gaaacggtat tcaaatacgg ggtggtcgtg ccgtggggca
     4261 tacgtacgcc tttgtcgcgg cagtatttga gcaggttttc caagaggtat tgcgcgcgtt
     4321 cgccgccttc atattcgagg acggagctta acgcgtccag ccactcttgg gtttcgatag
     4381 ggtcaacatc gtgtaattgg gtggacatag tatctatcct ttatgttgag tgtttaatcg
     4441 gaagggaggg tgtagccaac ccctttattt tcgtttgtga aaaataataa gcaaaaacga
     4501 aaatttctaa atcaaaccga aacaaaataa tttaagttta atgttttcaa aaaattataa
     4561 aagtcttgga agcaagggaa aacttgaaaa aaaatgttcg gtctgctccg cacgaaatcc
     4621 tatcagcaat cgggtctgct ggcaaataac catgctttta aaagcaggtt ttatactgaa
     4681 gttggcgttt ggtaaggaca ggtctttttg attgcgaaaa cattctgttt aattttggtt
     4741 atattttttc ggaattgtgg gatatcgaat cgttatgtct ctgtcggcaa ttttcctatt
     4801 gcagaaaatc tatacacaag ctttgtggac aaccgtgttg ataagccacg gcttgtgtta
     4861 aaaa
//
LOCUS       DAXFZM010000111         4831 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.112, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000111 DAXFZM010000000
VERSION     DAXFZM010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4831)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4831)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4831
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.112"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..426
                     /locus_tag="ACFJAG_001935"
     CDS             <1..426
                     /locus_tag="ACFJAG_001935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HFC3981150.1"
                     /translation="RRKGRRGRGAAGKAVVFGIPKRNGRAYTVAEDDAEPETLLPAVK
                     KKIMPDGIVYADSPGSRGKLDAGGFTRCRINRSKEFADRRNHINGIGNFWNQAKRALR
                     KYNGIDRKPFPPLLRECEFRLNSGTPSRQLKILRDRCGI"
     gene            complement(394..1602)
                     /locus_tag="ACFJAG_001936"
     CDS             complement(394..1602)
                     /locus_tag="ACFJAG_001936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981151.1"
                     /translation="MHAQGAAAANSGTIEKTDKYTLVLAKQGQENNYTLNGGTEVKPL
                     NSLIIAANGGTNNITIKGKLADGPADAPPTIDNNSIERNINKNGYTYAWQNWSGAVML
                     VDQSYEGENKVTFENVTIAAHNAPAGILSDDRHKSSSLAPAMLAFKGRNTINMDADSN
                     ANSSNEGILLLNNGEKMGEYRLVSEEGSTLNINIKSGKDKGQGITANHYGNSDINFNK
                     ASPNITTMEFKGDVNIKIDRNGQEEAESNGFGFYSSRKLGNKKQIPEGSKMEAIFRGN
                     VDIVATPVYDEQGRPKSIGSAFAIDGKYSKVEVVGGEGKVVKIKGDIFAYNGGSVSVN
                     LANKDSYFEGEAHIGKRSFAKGKDMFALTVDADGYELTPDTKSIEKKKLNVRGCTRLS
                     LNSTPIPQDF"
     gene            1855..1930
                     /locus_tag="ACFJAG_001937"
     tRNA            1855..1930
                     /locus_tag="ACFJAG_001937"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1889..1891,aa:Glu,seq:ttc)
     gene            complement(2146..2298)
                     /locus_tag="ACFJAG_001938"
     CDS             complement(2146..2298)
                     /locus_tag="ACFJAG_001938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981152.1"
                     /translation="MPSENRSAGFVVHYYVVLQDKAQGKAAGCIVATDNEKRGRCRLN
                     RVLRRV"
     gene            2358..3164
                     /gene="thiD"
                     /locus_tag="ACFJAG_001939"
     CDS             2358..3164
                     /gene="thiD"
                     /locus_tag="ACFJAG_001939"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008902 - hydroxymethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0008972 - phosphomethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HFC3981153.1"
                     /translation="MKGSFVQTLAIAGSDSGGGAGIQADLKTFQMRGVFGTCVITAVT
                     AQNTLGVSAVHLVPTETITAQIQAIREDFDIRAYKIGMLGTAEIIECVADKLKHCSFG
                     RRVLDPVMIAKGGAPLLQDSAVAALTRLLLPDTDILTPNLPEAEALTGVHIENRKDAE
                     RAAKILLDYGVKNVIIKGGHLNGSTSGRCTDWLFTQNETLELDSPRFPTAHTHGTGCT
                     FSACITAELAKGLDVCKAVQTAKAYITAAISNPLEIGAGHGPVNHWAYRD"
     gene            complement(3222..4091)
                     /gene="tehB"
                     /locus_tag="ACFJAG_001940"
     CDS             complement(3222..4091)
                     /gene="tehB"
                     /locus_tag="ACFJAG_001940"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0046690 - response to tellurium ion
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase TehB"
                     /protein_id="HFC3981154.1"
                     /translation="MKERIVGQSGELFCFGQMPVWKVENLPEVLLSGYSSEEGEWVCL
                     NVLQGDVEVRAPDGAAEVWSAESGDCVFAPQQVFSVKPKTDDAEIRLSLYCAAADYFH
                     KKYGMSATHSAVAAAQDTVPAGRALDMGCGQGRNALFLGLKGFDVTAADCNPAALANV
                     AELAEAEGLNVRTLEYDLNAAALQGEFDYIVATVVLMFLMPQRVPDVIADMQAHTAAG
                     GYNLIVSAMDTADFPCPMPFPFKFKEGELKDYYRDWELVEYKEELGAMHAKDENGNPI
                     RFKFVTMLAKKPG"
     gene            4204..4641
                     /gene="rnhA"
                     /locus_tag="ACFJAG_001941"
     CDS             4204..4641
                     /gene="rnhA"
                     /locus_tag="ACFJAG_001941"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HFC3981155.1"
                     /translation="MDTPVYLYTDGACKGNPGAGGWGVLMRYGSREKELFGGEAQTTN
                     NRMELTAVIEGLKSLKRRCTVIICTDSQYVKNGMENWIHGWKRNGWKTAAKQPVKNDD
                     LWQELDALVGQHQVSWTWVKGHAGHAENERADDLANRGAAQFS"
BASE COUNT         1123 a         1352 c         1166 g         1190 t
ORIGIN      
        1 cggcgtaaag gcagacgcgg tcgcggcgcg gcaggaaaag cggttgtctt cggcattccg
       61 aaacgcaacg ggcgggccta taccgttgcc gaggacgatg ccgagcctga aacgttgctc
      121 cctgccgtca aaaagaaaat catgccggac ggtattgttt atgccgatag cccgggcagc
      181 cgcggcaagt tggacgcggg cggttttacc cgttgccgca tcaaccgttc caaggaattt
      241 gcagaccgtc ggaaccacat taacggcatt gggaactttt ggaatcaggc aaaacgcgcc
      301 ttgcgaaaat acaacggaat cgatcgtaaa cctttcccgc cgttgttgag ggaatgcgaa
      361 tttcgactta actccggcac accgtcccgg cagctaaaaa tcctgcggga tcggtgtgga
      421 atttagggat aatctagtac agcccctaac attcagcttt ttcttttcaa tcgactttgt
      481 atcgggggtt aattcatatc cgtccgcatc cacggttaag gcaaacatat ctttcccttt
      541 ggcaaagctc cttttcccga tatgggcttc cccttcaaaa taagagtctt tgttggcaag
      601 gttcacgctc acgctgccgc cgttgtaggc gaaaatatcg cctttgattt tgacaacctt
      661 gccttccccg ccgacaacct cgactttgct gtatttcccg tcaatcgcaa acgcgctgcc
      721 tatgcttttg ggcctgcctt gctcgtcata aaccggcgtt gcaacgatat cgacgttccc
      781 acggaaaatc gcttccatct tagaaccttc cggaatctgc ttcttattgc ctaatttgcg
      841 gcttgaatag aagccaaaac cgttgctttc cgcctcttcc tgtccgttcc tatcgatttt
      901 aatgtttaca tcgcccttga actccattgt ggtgatgttt ggagaagcct tgttgaagtt
      961 gatgtctgag ttaccatagt ggttggcggt aatgccctgt cctttatctt ttcctgattt
     1021 gatgttgata ttcagcgtcg agccttcttc ggaaacaaga cgatattctc ccattttttc
     1081 accattatta agcaatagga taccttcgtt actagagttg gcatttgagt ccgcgtccat
     1141 attgatggta ttgcgccctt taaaggcaag catcgccggc gccaagctac tggatttatg
     1201 cctatcatca gacaaaatgc cggcaggcgc gttatgggcg gctatggtta cgttttcaaa
     1261 agtaacctta ttttctccct catagctttg atccaccaac atcaccgcgc cgctccaatt
     1321 ctgccatgcg tacgtgtaac cgtttttatt tatatttctt tcaatcgagt tattgtcaat
     1381 cgtcggcggg gcatcggcag gaccgtctgc caatttgcct tttatcgtaa tgttgttcgt
     1441 accgccgttg gcggcaatga tgagggaatt taagggtttg acttcggttc cgccattaag
     1501 ggtatagttg ttctcttgcc cttgttttgc gaggacgagg gtgtatttgt ctgtcttctc
     1561 tatcgttcca ctgtttgcag cggccgcccc ttgcgcgtgc atagaagcgg ccgcgaagcc
     1621 aagtaagatg cactgaactg tcttcttttg tttcatcggt ttttccattt tgaaggtatg
     1681 tgatttttat cattatatgc ttaaatcatt gacacgcccc caaaaaaaaa atgaattgct
     1741 tgatattcca atgtttttta tcttgtgata cggtcagaca aacgccccct gacattcgtt
     1801 tagacggcat cgtattgcta aatttctata agtatgtata atgtccgttt ccacgcgccc
     1861 atcgtctaga ggcctaggac actgcccttt cacggcggca accggggttc gaatccccgt
     1921 gggcgtgcca attcaaaaac ctgcttgttt caagcaggtt ttttattatg aatcgttatt
     1981 cccgcaattt ttcgtcattg ccgtgaaaac gggaatctag aacctcaaac tttcagataa
     2041 tctttgaata ttgctgttgt tctaaggtcc ggattcccgc ctgcgcggga atgacggaat
     2101 tttaggtttc tgtttttgcg ggaatgacga atgaagcgtg ccggtttata ctcgccgcaa
     2161 cacgcggttc agacggcatc gccctctttt ttcattatca gttgctacga tgcaccccgc
     2221 tgccttgccc tgtgccttgt cctgcaatac gacataataa tgcaccacaa accccgcgct
     2281 gcggttttca gacggcattg cctgcttttt tacaggcagt agcccttttt atcggacgca
     2341 atattaagga ggaacaaatg aaaggctctt ttgtgcagac gcttgccatc gccggttcgg
     2401 attcgggcgg cggtgcgggc attcaggcgg atttgaaaac gtttcagatg cgcggcgtgt
     2461 tcggaacgtg tgtcatcacc gccgttaccg cgcaaaatac cttgggcgtg tcggcggttc
     2521 atctcgtccc gaccgaaacc atcaccgcac aaatccaagc aatcagggaa gactttgaca
     2581 tccgcgccta caaaatcggt atgctcggca cggcggaaat catcgaatgc gttgccgaca
     2641 agctgaaaca ctgcagcttt ggcaggcgcg tactcgaccc tgtgatgatt gccaaaggcg
     2701 gtgcgccgct gttgcaggat tccgccgttg cggcactgac gcgcctgctg ctgccggaca
     2761 cggacatcct gacccccaac ctgcccgagg cggaagcctt gacgggcgtg catatcgaaa
     2821 accgtaaaga tgcggaacgt gcggcaaaaa tcctgcttga ttacggtgtc aaaaatgtca
     2881 ttatcaaagg cggacatttg aacggcagca caagcggacg ctgcacggat tggctgttta
     2941 cgcaaaacga aacgctggaa ttggacagcc cgcgctttcc gaccgcccac acgcacggca
     3001 cgggctgcac gttttccgcc tgcattaccg ccgagttggc aaaaggctta gacgtttgca
     3061 aagccgtaca gactgccaag gcctacatca cggcggcaat ctcaaaccct ttggaaatcg
     3121 gcgcgggaca cgggccggtc aatcattggg cgtatcggga ctagacgtaa aaatgccgtc
     3181 tgaacgcctt ttcgggttca gacggcatcg tccggcgcgg cttatcctgg ttttttcgcc
     3241 agcatagtta caaatttaaa ccgtatcggg ttgccgtttt cgtctttggc gtgcatcgcg
     3301 cccaattctt ctttatattc gaccagctcc caatcccgat aataatcctt cagctcgccc
     3361 tctttaaatt tgaaggggaa cggcatcggg caggggaaat ccgccgtatc cattgccgat
     3421 acgattaagt tgtacccgcc cgccgccgta tgcgcctgca tatcggcaat cacgtcgggc
     3481 acgcgctgcg gcatcaggaa catcagcacc accgttgcca caatataatc aaactcgccc
     3541 tgaagggcgg cggcgttcaa atcatattcc agcgtgcgga cgttcaaacc ctccgcctct
     3601 gccagttccg ccacgtttgc caacgcggcg ggattgcaat cggcagcggt tacatcaaac
     3661 cccttcaaac ccaggaacag cgcgttgcgc ccctgtccgc agcccatatc caacgccctg
     3721 cccgccggta cggtatcctg tgccgccgcg accgcagaat gcgtggcact catcccgtat
     3781 tttttgtgaa aatagtctgc cgccgcgcaa tacagcgaca aacggatttc ggcatcgtcc
     3841 gttttcggtt tgaccgaaaa cacctgctgc ggcgcaaaca cgcaatcgcc gctttccgcc
     3901 gaccaaacct ctgccgcccc gtccggtgca cggacttcga catcaccctg caacacattc
     3961 aggcagaccc attccccttc ctcggacgaa taacccgaca ataaaacttc cggcaggttt
     4021 tccactttcc atacaggcat ttgtccgaaa caaaacaact cgccactttg acccactatc
     4081 cgctccttca tattcaaaaa taaagttgca cattatatgc ctatttcaat ccgccgcaat
     4141 ctttcagacg gcacgacgca caaaccgctt ataatcacgc cggacaccac acaaaggcac
     4201 gatatggaca cacccgttta cctctacacg gacggcgcgt gcaaaggcaa tcccggcgcg
     4261 ggcggctggg gcgtattaat gcgctacggc agccgcgaaa aagaactttt cggcggcgaa
     4321 gcgcaaacca ccaacaaccg catggagctg accgccgtta tcgaagggct gaaatcgctc
     4381 aaacgccgct gcaccgtcat catctgcacc gactcgcaat acgtcaaaaa cggcatggaa
     4441 aactggatac acggttggaa gcgcaacggc tggaaaaccg ccgccaaaca gcccgtcaaa
     4501 aacgacgact tgtggcaaga actcgacgct ctggtcgggc agcatcaagt cagctggact
     4561 tgggttaaag gacacgcggg acacgcggaa aacgaacgcg ccgacgattt ggcaaaccgt
     4621 ggcgcggcac agttttcttg attgccgcac cgacaaaaat gccgtctgaa accgctaatg
     4681 ggcttcagac ggcatcgtcc tccaccgtca ttcccgcgca ggcgggaatc cagaacgtcg
     4741 ggcaacggca atattcaaaa gccgtctgaa aatttaaaag ttctagattc ccgttttcac
     4801 gggaatgacg aaaagttgcg gacagcagag g
//
LOCUS       DAXFZM010000112         4803 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.113, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000112 DAXFZM010000000
VERSION     DAXFZM010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4803)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4803)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4803
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.113"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            79..840
                     /locus_tag="ACFJAG_001942"
     CDS             79..840
                     /locus_tag="ACFJAG_001942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981156.1"
                     /translation="MEMQLDKQTLTVVVRNSEPVELSVFAQSMMSLADDYESMCGSAG
                     SHARLYIKEIRQGSIIAELAPLLPLAGTLFEGAGQILAYAKNFIEITDWLMGKGKEPA
                     GVTDSQIRNIANIMQPAASDKNGSIEINVNDNNGSVVNNITYNYFAANTVQNQARRIL
                     GERAEASESGDYGQMVMYFVQAAPTKETNQAVIEGIYSRPVKILIPEHIKREMFAEPY
                     PFEKYYIVDVSVQTARGKPRLYKVTGYHGVVDGDD"
     gene            complement(939..1340)
                     /locus_tag="ACFJAG_001943"
     CDS             complement(939..1340)
                     /locus_tag="ACFJAG_001943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0110001 - toxin-antitoxin complex
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HFC3981157.1"
                     /translation="MFIPAALHKDEHSAYGVTIPDLPGCFSCGDTVEEAVANARSAAY
                     MHIDGMIEDGGFKNLAVSSIADLSQEPDYHGATWVMIEIDPAKISRQQIRFNVSWPQY
                     LLDRVDEYTSANHETRSGFLAKAALLTMNQA"
     gene            complement(1442..1624)
                     /locus_tag="ACFJAG_001944"
     CDS             complement(1442..1624)
                     /locus_tag="ACFJAG_001944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicA family
                     toxin"
                     /protein_id="HFC3981158.1"
                     /translation="MNSLDVIALLKQDGWYKVAQSGSHSQYKHPTKKGRVTVPHPKKD
                     LPTGTVKNIYKQAGLK"
     gene            complement(1794..2612)
                     /locus_tag="ACFJAG_001945"
     CDS             complement(1794..2612)
                     /locus_tag="ACFJAG_001945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3037 domain-containing protein"
                     /protein_id="HFC3981159.1"
                     /translation="MNQYAMRFAVIRFMPYVQTREFANIGIIITHPKSGYFDFKIEQR
                     YSRLSRFFRRFDSSVYKAATRAFAEELQRIGKLAAYSAPDQIRAMLDHLTRPREALIM
                     AAQPGVTLAPDRGQELNRLFDYFVAHSFAKSQPEAELTRQIQAMLKPLQTAYPFKEST
                     IGDPSGFHASIPLVQKAENGEIRKIIKPIYFGQKDPADIYYKSDKWIAGIKRLRRGGY
                     IDRSEILFAYEPPERPDKAQEKALLDVLGDLEEQGIRLADNRSEGKIIRNFACG"
     gene            complement(2609..3307)
                     /locus_tag="ACFJAG_001946"
     CDS             complement(2609..3307)
                     /locus_tag="ACFJAG_001946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HipA family kinase"
                     /protein_id="HFC3981160.1"
                     /translation="MDRAEQGVTSPFICMAENGLEYFVKGLHATRASQINEWIGGNMA
                     QALGLPVAPFELLEVGEELYEELPAKMKEIGKGICFGSLAQKGCALLEPADIPRIDTV
                     MQRQIAAFDWFVRNEDRTIGNPNLLYRNCNNSLIVIDHNCAFDTGFNPNNFLQNHIFS
                     SAFRQILEDWVLREEMELWLKSALPAYRKACDNLPPEWAWANEERDLPAAYNRSRTDE
                     TVRRIDNGTLWSIS"
     gene            complement(3546..4256)
                     /locus_tag="ACFJAG_001947"
     CDS             complement(3546..4256)
                     /locus_tag="ACFJAG_001947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HFC3981161.1"
                     /translation="MSEFKDRLKEARKNKNLSQENLAKLAEVSQSTIAALESGRNKKA
                     TNIAKLAKILDVSAFWLETGEGSRNTPVLINPDLPHEVKDIHRPMMWSSNDPLPDDDY
                     VFVPYLKESCFKGGAGAYEIPDYNGYRLPFGKSTLRRKGINPDNVFCCTLTGDSMEEK
                     IAEDAAIAVDTGETAIRDGKIYAFAQDGMFRVKYLIRQPGNSVLIRSHNSGFYPDETA
                     SLDSLTVIGRVFWWSVLD"
     gene            4372..4560
                     /locus_tag="ACFJAG_001948"
     CDS             4372..4560
                     /locus_tag="ACFJAG_001948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HFC3981162.1"
                     /translation="MDEPRDLVLFLKEKMSSAAIAKEVGCSKEFINKIGNGERKNPRY
                     QIVDSLRSLYRKNQNQPK"
     gene            4640..4795
                     /locus_tag="ACFJAG_001949"
     CDS             4640..4795
                     /locus_tag="ACFJAG_001949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981163.1"
                     /translation="MKKQDRNRLSKKDRRLIKKAMLKAAAKGCDEVYKIAPGLKDGFE
                     LLGKQPD"
BASE COUNT         1155 a         1095 c         1271 g         1282 t
ORIGIN      
        1 gagattccgc aggcgcaaaa aaaccgcccg atatttcggg cggcgtatta aaatcagatg
       61 aaattaagga ggcttattat ggaaatgcaa ttggacaaac agacattgac agtggttgtc
      121 agaaacagcg agccggtgga attgtcggta tttgcgcagt ctatgatgag ccttgccgat
      181 gattacgaat ccatgtgcgg cagcgcgggc agtcatgcgc ggctgtatat taaggaaatc
      241 aggcagggca gcattattgc cgagcttgcg cccctcttgc ctttggcggg tacgcttttt
      301 gaaggcgcgg ggcagatatt ggcgtacgcc aagaatttta ttgagattac cgattggctg
      361 atgggtaaag gcaaagaacc cgcaggggta acggacagcc aaatccgcaa tattgcaaat
      421 atcatgcagc ctgccgcatc ggataaaaac gggtcgattg aaatcaacgt gaacgacaac
      481 aacggctccg tcgtcaataa tattacctac aactatttcg cggcaaacac ggtacaaaat
      541 caggcaaggc ggatactggg cgaacgggcg gaagcgtccg aatcagggga ttacgggcag
      601 atggtgatgt atttcgtaca agccgcgccg acaaaggaaa ccaatcaggc ggttattgaa
      661 gggatataca gccgtccggt caaaatcctg attcccgaac acatcaagcg cgaaatgttt
      721 gcagagcctt atccatttga aaaatattat attgttgacg taagcgtaca gacggcgcgc
      781 ggcaagccca ggctctacaa agttaccggg tatcacgggg tagtcgatgg ggacgattga
      841 aaaccgcctt ttcgggcggc tttgtcggtt ttgtgttgtt ttcaggttcg gcggggcgtg
      901 aaaaaagccc gcgtgtgcgg gcgggttgaa cgggctggct atgcctgatt catggtaagc
      961 agggcggctt tggctaaaaa accgctacgg gtttcatgat ttgcggatgt atattcatcc
     1021 actctatcaa gaaggtattg cggccagctg acgttgaatc ggatttgctg ccgactgatt
     1081 tttgcagggt cgatttcaat cattacccat gttgccccat gataatcagg ttcttggctc
     1141 aaatcggcaa tgctgcttac ggcaaggttt ttgaaccctc cgtcctcaat cataccgtca
     1201 atatgcatat aggcggcaga acgggcgttg gcgacggctt cttcaacggt gtcgccgcaa
     1261 gagaaacagc cgggaaggtc ggggatggtt acgccatatg ccgaatgttc gtctttgtgc
     1321 agggcggcag ggataaacat ttgatttcct ttaattatgt tgttcaggtt tatgggcgcg
     1381 tgagataacc cgttgattgt ttgattagaa ggggggcagc gggaaacccc gctgcctgcc
     1441 gttacttcaa accggcttgc ttatagatat tttttacagt acctgtcggc aagtcttttt
     1501 tcgggtgcgg cacggttaca cggccttttt ttgttgggtg cttatattgc gaatggctcc
     1561 cggattgtgc aactttatac caaccgtctt gtttgagtag ggcaataacg tctaggctat
     1621 tcaattatca ctcctaatct taatgcatgg cacgcctgcc aatgtgcgta ataatacaca
     1681 ctaattttta ttttgtcaat ttttatgtgt atttgtgtgt aaaaatatct ttcggcagta
     1741 gttgcaggga agggtgtaaa aagcccgcat aacgcgggcg gtcttgaggg ctgtcagccg
     1801 caggcaaagt ttctgatgat tttgccttcg cttcggttat cggcaagccg tatgccctgt
     1861 tcctccaggt cgcccaatac gtcaagcaat gccttttctt gtgccttgtc gggacgctcc
     1921 ggcggttcgt aggcaaacaa tatttcagag cggtcgatgt atccgccgcg ccgcaaccgt
     1981 tttatgccgg caatccactt atcagacttg taatagatgt cggcagggtc tttctgtccg
     2041 aaatagatag gcttgatgat tttccgtatt tcgccgtttt ccgccttttg caccaagggg
     2101 atggaggcgt gaaagcctga cgggtcgccg attgtgcttt ctttgaaggg gtatgccgtc
     2161 tgaagcggct ttaacattgc ctgtatttgt cgggtaagtt ctgcttcggg ttggctttta
     2221 gcaaagctgt gggcgacaaa ataatcaaac aggcggttca gttcctgccc cctgtcgggg
     2281 gcgagggtta cgcccggttg ggcggccata atcagggctt cgcgcgggcg ggtcaaatgg
     2341 tcgagcatgg cgcgtatctg atcgggcgcg gagtatgccg ccaatttccc aatccgctgt
     2401 aattcttctg caaaggcacg ggtcgccgct ttatagacgg acgaatcgaa gcggcggaaa
     2461 aaacggctca atctgctgta acgctgttcg attttaaagt cgaagtagcc gcttttggga
     2521 tgggttatga tgatgccgat gttggcaaat tcgcgcgttt ggacataggg cataaaccgt
     2581 atgacggcaa aacgcatggc atattggttc atgagatgct ccaaagtgtt ccgttatcaa
     2641 tgcggcggac ggtttcgtcg gtgcggctgc ggttataggc ggcgggcagg tcgcgctctt
     2701 cgtttgccca tgcccactcc ggcggcagat tatcacacgc ttttctgtag gctggcaatg
     2761 cgcttttcag ccataattcc atctcttccc gaagcaccca atcttccaaa atctgtctaa
     2821 atgccgatga gaaaatatga ttttgcagaa agttatttgg attgaagccg gtgtcgaagg
     2881 cgcagttatg atcaataaca atcaaggaat tgttgcaatt tctatacaaa aggttagggt
     2941 tgccgattgt tctgtcttca ttacggacaa accaatcgaa agcggcgatt tgccgctgca
     3001 tgactgtatc gattcgcggg atgtccgcag gctccagtaa cgcacagcct ttttgcgcca
     3061 gtgagccgaa acagatgcct ttgccgattt ctttcatctt tgcgggcaat tcttcgtaca
     3121 gctcttctcc gacttccaac agctcaaacg gagcaacggg caagcccaaa gcctgcgcca
     3181 tgtttccgcc tatccattcg tttatttggc ttgcacgggt ggcgtgcagc cctttaacga
     3241 aatattccag accattctcc gccatacaga tgaacggcga ggtaacacct tgctccgcac
     3301 gatccattat tgtctgtatc tgcaacattt cttttcttta tcctatgttt caacacacag
     3361 gacgacacat aaagcaccgc cctatgtgtt gccctgattc ggaaggggtt acgcccctcc
     3421 caaacagagt ctgatcctgc cgccctaaag ggcggggttt caaccgaaaa ggaaatacga
     3481 tgaaatttac actttgtgta aatctgtaaa tccgactttt tgagatttcc ccctagagga
     3541 atttgtcaat ccagcacgct ccaccaaaat accctaccaa taacggtcag gctgtctaaa
     3601 gaggcggttt cgtcgggata gaagccgctg ttgtggctgc gtatcagcac gctgttgccg
     3661 ggctgccgta tcaggtattt gacgcggaac atgccgtctt gggcgaaggc gtatattttg
     3721 ccgtcccgta tggcggtttc gcccgtatct acggcgattg ccgcgtcttc tgcgattttt
     3781 tcctccatgc tgtcgccggt cagggtgcag cagaagacgt tgtcggggtt gatgcctttg
     3841 cgccttaacg ttgatttgcc gaacggcagg cggtagccgt tgtagtcggg gatttcatac
     3901 gcgcccgccc cgcctttgaa gcagctctct ttgaggtagg ggacgaaaac ataatcatcg
     3961 tcgggcagcg ggtcgttgct gctccacatc atcgggcggt ggatgtcttt gacttcgtgg
     4021 ggcaggtcgg ggttgatgag gacgggcgta tttcggctgc cttcgcctgt ctcaagccaa
     4081 aaagccgata catctaaaat tttggcaagt ttcgcgatat tggtagcctt tttattccta
     4141 cccgattcca acgctgcgat ggttgattga cttacttctg ccagttttgc caaattttct
     4201 tgacttaaat ttttattttt ccgcgcctct ttcaggcggt ctttaaattc agacatatca
     4261 aactccttat aacgcaacgg gtactattgt actttttatt ataagtattt tggtgcttgc
     4321 attatgagta cgtttgtact tataatgttc aaaatttgag ctggggcaaa tatggacgaa
     4381 ccaagagatt tagtgttgtt tttgaaagaa aaaatgagca gcgcggctat cgcgaaagag
     4441 gtcggctgct cgaaagagtt tattaataaa atcggtaacg gcgagcgaaa aaacccgcgt
     4501 tatcaaattg ttgattcttt aaggagttta tacaggaaga atcaaaacca acccaaataa
     4561 aaagcccgtc gggtcagatg ttaattgata taaccgaatt gaagcggaag tcatccgcaa
     4621 tttaccggaa aggaaaaaaa tgaagaagca ggacagaaac cgcctgtcga agaaagacag
     4681 acggctgatt aaaaaggcga tgctgaaagc cgccgccaaa ggctgcgatg aggtttacaa
     4741 aatcgcgccg ggtttgaaag acggctttga attacttgga aagcagcccg attaaatatt
     4801 cgt
//
LOCUS       DAXFZM010000113         4687 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.114, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000113 DAXFZM010000000
VERSION     DAXFZM010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4687)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4687)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4687
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.114"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..243
                     /locus_tag="ACFJAG_001950"
     CDS             <1..243
                     /locus_tag="ACFJAG_001950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981164.1"
                     /translation="RGYGAAMLEVSERLKAAAVEHAEHARKSSAAYQAQKAAREEKER
                     VRYVQTLKIIEKPVYRNACFDADGVRELNAAVDDGG"
     gene            complement(542..664)
                     /locus_tag="ACFJAG_001951"
     CDS             complement(542..664)
                     /locus_tag="ACFJAG_001951"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981165.1"
                     /translation="MPSESLSECEACPQGAASVVVRIGTAFSFPPIIGALNNFV"
     gene            920..3964
                     /locus_tag="ACFJAG_001952"
     CDS             920..3964
                     /locus_tag="ACFJAG_001952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tape measure protein"
                     /protein_id="HFC3981166.1"
                     /translation="MSDLEAKVRITVENHTKQGFDSAAADADKAAEKMRSSGDNAAKG
                     FKAAIDSMHETMRNLHADVKAGFEAAGNQAQQASEKVRAEVGKIGSGLSGLTKLLAGL
                     ATADFAKSVLDTADAMQSINSQVRQVTSSETEYLAVQQQLLDTANRTSASLESTANLY
                     VSTSRALKDYGYTQQEILKFTEATNNAMTIGGVGARQQAAALFQLSQALGSGVLQGDE
                     FKSISEAAPILLDTIAEYMGKSRAEIKKLGSEGKLTADVIFKAISGASEKFGEQAAKM
                     PVTMGQALTVFSNNWQSMVSKLLNDSGTMSGIAAVIKLIADNLNLVVPIVAGFAVAVA
                     AAVAPTLALNLALLANPFGIIAVAIGTVVGLIAKFGDEIDVFGGGWSNLSDVIRAVWQ
                     IITETVGEAVGTVKSWFDGLTGRLNEGAGGWPSLFGRVMSVISSAIGAYVNVYINIFA
                     TGWMLIKEAANDMPQFFANLGKAIGNVFISAIERMINKAVGMINSMIDFANKAASMAG
                     ISGIGKLNKVRMGRMDDGGLGERIHDSLTKDRAGAMANAVRERAADIHEADALKGRGG
                     GGHAKTARKKPGANQGGGKGGKSRSGGPGAAKDPMQAWEGEIKARKLAHREMQRETLT
                     HQEWDLAREAEYWRAKLATVDANGKTGVKIREKILTLEDQLSKQSTEAKMNQAAEWEK
                     LDKHKLEMEKDAADQALADGRISQLERLDLEIEFENRRYRIAYDALQERIALAEQDPA
                     YSQAAIGKLKAQMGELGRGHERTQAKNEGKRENQRRKDAPNVMEMLQDGGRNVWQEAQ
                     QQMGQAFTAMLARAQNFRQAMNGFFKSMGQTFIQEMVTKPLTGLMRRMVEESAIYKMI
                     FGTKETLETAAAAKTAATKATETTAVVSSNAVQAASGAAASQAHIPYVGPILAVAAMA
                     AMMSAVMGLMGGGGSQTTTTTTRIPSAAGGWDIPAGINPLTQLHENEMVLPAEHAQTI
                     REMADQQGGGSTVIINSTGGDFIHKNDLAKLLKQMKRDFKFV"
     gene            complement(4024..4503)
                     /locus_tag="ACFJAG_001953"
     CDS             complement(4024..4503)
                     /locus_tag="ACFJAG_001953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4760 domain-containing protein"
                     /protein_id="HFC3981167.1"
                     /translation="MTDNLIQIATPILTVIGVFVAAYGIMRNTENAKKRATIDMIMAE
                     RNNAALQEAITIVNGLAKTDGCILATYTSDTPDKKKDREAILTVLNQREFVCAGVLGG
                     ALHEKMYKDFEYSMLLRDWDNLSSFIFEIRRIRSAPTAFQEFEAVARKWKKKPLKTK"
BASE COUNT         1159 a         1181 c         1409 g          938 t
ORIGIN      
        1 cgcggatacg gtgcggctat gctggaggtt tcggaacgcc tcaaagccgc cgcggtcgaa
       61 cacgccgaac acgcccgcaa atcgtccgcc gcgtatcagg cgcaaaaggc ggcgcgtgag
      121 gaaaaagaaa gggtgcgcta tgtgcaaacg cttaaaatca ttgaaaaacc tgtgtaccgc
      181 aatgcctgtt ttgatgctga cggcgtgcgc gaactcaacg ccgccgttga cgacggcggt
      241 taagccgccc gccgatttgg tgcggccctg cccgaaactg ccgcaccttg aagggaacac
      301 gggcgcggac gtgctgccgt gggccctgaa ggcggccggt atgtataacg actgcagggc
      361 gcggcacggc gcgctggtac gggcgttggg cgcggattga gttgccaacc ggaagtttgc
      421 aaccgaaccg tcggttccgg gttggcggcc gcatcggggg aagcgtcggc attccccccg
      481 attttttaca tatcgggcgg acgcggcaaa tttttgccgt tttgtttgcg cgaagggggc
      541 gttatacaaa attattaagc gcaccaataa tgggcggaaa tgaaaatgcc gtaccgatcc
      601 ggacaacaac cgatgccgca ccctgcgggc aggcttcgca ctctgaaagg ctttcggacg
      661 gcattgttct tacctgcgcg tcaaaccgcc ttcgtgtaaa gcggttgcaa aaaagccttt
      721 tattttgaca gggtgcagag atgaacgccg aaggattttg tgaaaaacaa accgcctgcc
      781 ggccggacgg gcgccgaaat gcgggcgatc gtgccgattt gaaggccttt gaatttgccg
      841 gacgggaatt ggcgaattat cgggaaatgt tgaaacgtta tgccgtctga aaagacggct
      901 tttttatttg gggctgtaaa tgagcgattt ggaagccaaa gtcaggataa cggtagaaaa
      961 ccatacgaag cagggttttg attcggccgc cgccgatgct gataaggcgg cggaaaagat
     1021 gcgcagcagc ggcgataatg ccgcaaaggg ctttaaagct gcaatcgaca gtatgcacga
     1081 gaccatgcgc aatttgcacg ccgatgtgaa agcgggattt gaagcggcgg gcaatcaggc
     1141 gcaacaggcg tctgaaaagg ttagggccga agtgggtaaa atcggctcag gcttatcggg
     1201 gctgaccaaa ctgctggcag gattagcaac cgcagacttc gccaaatcgg tgcttgatac
     1261 cgccgatgcg atgcagtcga taaacagcca agtccgacaa gtcacgtcgt ctgaaacgga
     1321 gtatctggcc gtgcagcagc agcttctcga tacggcaaac cgtaccagtg catcgcttga
     1381 atcaacggca aacctgtacg tttccacaag ccgcgcgttg aaagactacg gctacacgca
     1441 gcaggaaatt ttaaaattca ccgaggcaac caacaacgcg atgaccatcg gcggcgttgg
     1501 cgcgcgacaa caggccgccg cgctgttcca gttatcgcag gctttgggca gcggcgtatt
     1561 gcagggcgat gaatttaaat ccatttccga agccgcacct attttgctgg ataccattgc
     1621 ggaatatatg ggcaaatccc gcgctgaaat caaaaagctg ggcagcgaag ggaaattgac
     1681 ggcggatgtg attttcaaag ccatttccgg cgcgtcggag aagttcgggg agcaggcggc
     1741 caaaatgccc gtgacgatgg ggcaggcttt gacggtgttc tcgaacaact ggcaaagcat
     1801 ggtttcaaaa ctgctgaacg acagcggcac aatgtcgggg attgccgccg ttattaaact
     1861 gattgcggat aaccttaatt tggttgttcc gatcgtcgca ggttttgccg ttgccgttgc
     1921 cgccgccgtt gcaccgacac tggctttgaa tcttgcactg ctggcaaacc cgttcgggat
     1981 tattgccgtc gcaatcggca cggttgtcgg gctgattgcg aaattcggcg atgaaatcga
     2041 tgttttcggc ggcggctggt cgaatctttc cgatgtgatt cgggcggttt ggcaaatcat
     2101 cacggaaacc gtcggggaag cggtgggaac cgtcaaatcg tggtttgacg ggctgacagg
     2161 ccggctgaac gagggcgcgg gcggctggcc gtcgttgttc gggcgcgtga tgagcgtcat
     2221 ctcaagcgca atcggcgcgt atgtgaacgt ttatatcaac atattcgcaa ccggctggat
     2281 gctgattaaa gaagccgcaa acgatatgcc gcaattcttc gccaatctcg gcaaggccat
     2341 aggcaacgtg tttatttccg cgatcgaacg gatgataaac aaagcggtag gcatgattaa
     2401 cagcatgatt gactttgcca acaaagccgc gtcgatggcc gggatatcgg gcattggaaa
     2461 gctgaacaag gttcggatgg ggcggatgga cgacggcggg cttggcgagc gtattcatga
     2521 cagcttgacg aaagaccgcg ccggcgcaat ggcaaatgcc gtccgcgaac gggccgccga
     2581 tattcacgaa gccgatgccc tcaagggacg cggcggcgga ggacacgcca aaaccgcccg
     2641 gaaaaagccg ggcgcaaatc agggcggcgg caaagggggc aaatcccgtt cgggcggtcc
     2701 gggcgcggcc aaagacccga tgcaggcttg ggaaggggaa atcaaagccc gaaaactcgc
     2761 acaccgcgaa atgcagcgcg aaacgctcac gcaccaagaa tgggatttgg cgcgtgaggc
     2821 ggaatattgg cgggcgaagc tggcaacggt ggacgccaac ggaaaaacag gcgtaaaaat
     2881 ccgcgaaaaa atcctgacgc ttgaagacca attatcgaag cagtcaaccg aagccaaaat
     2941 gaatcaggcg gccgaatggg agaaattgga caagcacaag ctggagatgg agaaagacgc
     3001 ggcagaccaa gccctggcag acggacgtat ttcgcaactc gaacgcctgg acttggaaat
     3061 cgagtttgaa aaccgacgtt accggattgc ctatgacgca ttgcaggaac ggatcgcact
     3121 tgccgaacaa gacccggcat acagtcaggc ggcaatcggc aagctcaagg cccaaatggg
     3181 cgaattgggg cgggggcacg aacggacgca ggcgaagaac gagggcaaac gcgaaaacca
     3241 acgccgcaaa gacgcgccca acgtcatgga aatgctgcaa gacggcggca ggaacgtttg
     3301 gcaggaagca cagcagcaga tggggcaggc gttcaccgcc atgctggcga gggcgcagaa
     3361 tttcaggcag gcgatgaacg gctttttcaa gagtatgggg caaaccttta ttcaggaaat
     3421 ggttacgaaa cctttgacgg gcttgatgcg gcgcatggtt gaggaatcgg ccatttacaa
     3481 gatgattttc ggaactaagg aaacgctgga gacagcggcg gcagccaaga cggcggcaac
     3541 taaggcaacc gagacaacgg cggttgtcag tagtaatgct gttcaagcgg cttcaggcgc
     3601 ggcggcttcc caggcgcata tcccatatgt cggcccgatt cttgccgttg cggctatggc
     3661 ggcgatgatg tcggctgtaa tgggactgat gggcggcggc ggttctcaaa cgaccacaac
     3721 cacgacgcgc attccctcgg cggcaggcgg ctgggacatt ccggcaggca tcaacccgct
     3781 gacccaactg cacgagaacg agatggtctt acccgcagaa cacgcccaaa ccatccgtga
     3841 aatggcggat cagcagggag gcggcagcac cgtcatcatc aattcgacag gaggcgactt
     3901 catccataaa aacgatttgg cgaagctctt gaagcagatg aaacgggact ttaaatttgt
     3961 ctgagaaaat gccgtccgaa aggttcggac ggcctatgtt gcggcgtacg tcaagctatt
     4021 aagctatttg gttttcagag gctttttctt ccatttccgg gctacggctt caaattcttg
     4081 aaaggccgtc ggcgcgctcc tgatacggcg tatttcaaaa atgaagctgc ttaggttgtc
     4141 ccagtcgcgt aacagcatgg agtattcgaa atctttatac attttctcgt gcagcgcccc
     4201 gcccaatacg cccgcacaga caaattcgcg ctggtttaaa actgtcagta tggcttcacg
     4261 gtctttcttc ttgtccgggg tatctgatgt ataggtggcg agtatgcatc cgtctgtttt
     4321 tgccagcccg tttactatgg ttatggcttc ttgaagggcg gcattgttac gttcggccat
     4381 gatcatgtcg atggtggcgc gctttttggc gttttccgta ttcctcatga tgccgtaagc
     4441 ggcaacaaaa acgccgataa cagtcaatat cggcgttgct atctgtatta ggttgtcagt
     4501 cattgccgtc ccagccgtcc gaaaggcgga aatcacggct ttccgaataa atatgcccca
     4561 ttgtcatccc cttaagctga tgttgagaat aaatccttgc gtcggaatat acggcattgc
     4621 ctgactattt tcaagattcc gcaccccgcg gaccggacta tacaaaaaaa ccgccttcgt
     4681 gtaaagc
//
LOCUS       DAXFZM010000114         4441 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.115, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000114 DAXFZM010000000
VERSION     DAXFZM010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4441)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4441)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4441
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.115"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..261
                     /locus_tag="ACFJAG_001954"
     CDS             <1..261
                     /locus_tag="ACFJAG_001954"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981168.1"
                     /translation="KTNHILKQIISKSDFFKIKFQKKETGKIRHKTLTYSKPSVLQRK
                     YPKKTICLPSVSNRYTAGTRYFSDGAAVVRTDKNVTAAERIA"
     gene            315..2699
                     /gene="ppsA"
                     /locus_tag="ACFJAG_001955"
     CDS             315..2699
                     /gene="ppsA"
                     /locus_tag="ACFJAG_001955"
                     /EC_number="2.7.9.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008986 - pyruvate, water dikinase
                     activity [Evidence IEA];
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0006090 - pyruvate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate synthase"
                     /protein_id="HFC3981169.1"
                     /translation="MADNYVIWFENLRMTDVERVGGKNASLGEMISQLTEKGVRVPGG
                     FATTADAYRAFLAHNGLNERISAALAKLDVEDVSELARVGKEIRQWILDTPFPEQLDA
                     EIEAAWDKMVTDADGADISVAVRSSATAEDLPDASFAGQQETFLNINGLDNVKKAMRH
                     VFASLYNDRAISYRVHKGFEHDIVALSAGVQRMVRSDSGASGVMFTLDTESGYNQVVF
                     VTSSYGLGENVVQGAVNPDEFYVFKPTLKASKPAILRKTMGSKHIKMIFTDKAEAGKS
                     VTNVEVPEEDRNRFSITDEEITELAHYALTIEKHYGRPMDIEWGRDGLDGKLYILQAR
                     PETVKSQEEGSRNLRRYAINGEKTVLCEGRAIGQKVGQGKVRLIKDTSEMDSVEAGDV
                     LVTDMTDPDWEPVMKRASAIVTNRGGRTCHAAIIARELGIPAVVGCGNATELLENGQE
                     VTVSCAEGDTGFIYAGLLDVQITDVALDNMPKAPVKVMMNVGNPELAFSFANLPSEGI
                     GLARMEFIINRQIGIHPKALLEFDKQDDELKAEIIRRIAGYASPVDFYVDKIAEGVAT
                     LAASVYPRKTIVRMSDFKSNEYANLVGGSVYEPHEENPMLGFRGAARYVAESFKDCFA
                     LECKALKRVRDEMGLTNVEIMIPFVRTLGEAEAVVKALKENGLERGKNGLRLIMMCEL
                     PSNAVLAEQFLQYFDGFSIGSNDMTQLTLGLDRDSGLVSESFDERNPAVKVMLHLAIS
                     ACRKQNKYVGICGQGPSDHPDFAKWLVGEGIESVSLNPDTVIETWLYLANELNK"
     gene            2920..4179
                     /gene="rho"
                     /locus_tag="ACFJAG_001956"
     CDS             2920..4179
                     /gene="rho"
                     /locus_tag="ACFJAG_001956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003823056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008186 - ATP-dependent activity, acting
                     on RNA [Evidence IEA];
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HFC3981170.1"
                     /translation="MHVSELQTLHISKLLELAEEHGIENANRFRKQDLVFAIVRQMMK
                     KGEGFTCSGTLEILPDGFGFLRSADTSYLAGPDDIYVSPTQIRRFNLHTGDTIEGSVR
                     VPKDNERYFALVRLDSINGDHPEVCRHKILFENLTPLFPTEQLKLERDLKSEENLTGR
                     AIDLISPIGKGQRALLVAPPKIGKTVMLQNIAHAVTANYPEVELIVLLIDERPEEVTE
                     MSRSVRGEVVSSTFDEPAQRHVQVAEMVLEKAKRMVEHKKDVVILLDSITRLARAYNT
                     VVPASGKILTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALVETGSRMDDVIYEE
                     FKGTGNMELHLDRRMAEKRLFPAININKSGTRREELLVPNDQLQRMWLLRKFLHPMDE
                     IEATEFLNGKIKASKNNDDFFELMRGK"
BASE COUNT         1161 a         1320 c         1053 g          907 t
ORIGIN      
        1 aaaacaaatc atattttaaa acaaattatc tcaaaatcag atttctttaa aataaaattc
       61 caaaaaaaag aaacaggaaa aatacggcat aaaacattaa cctattcaaa accatctgtt
      121 ttacaaagga aatacccgaa aaaaacaata tgcctgccat cggtttcaaa ccgctacaca
      181 gccggaaccc gctatttttc agacggcgca gcggttgtcc ggacagataa aaacgtgaca
      241 gcggcggaac gaatcgctta aaataagcaa gcggatttgt ttctttttta acatattttg
      301 gattggacac acaaatggcc gacaactacg taatctggtt tgaaaacctg cgtatgacag
      361 atgttgaacg cgtgggcggt aaaaacgcct cgctgggcga aatgatcagt caactgaccg
      421 aaaaaggcgt tcgcgtcccc ggtggctttg ccaccacagc cgatgcctac cgcgcatttc
      481 tcgcacacaa cggtctgaac gaacgcattt ccgccgctct ggcaaaattg gatgtcgaag
      541 acgtttccga actggcacgc gtcggcaaag aaatccgcca atggattttg gacacgccct
      601 tccccgaaca gctcgatgcc gaaatcgaag cggcatggga caaaatggtt accgatgccg
      661 acggcgcgga catttccgtt gccgtacgct cttccgcaac cgccgaagac ctgcccgacg
      721 catcatttgc cggccaacag gaaaccttcc tgaatatcaa tggcttggat aacgttaaaa
      781 aagcgatgcg ccacgttttc gcctccctgt acaacgaccg cgccatttcc taccgcgtcc
      841 acaaaggctt cgaacacgac atcgtcgccc tttccgccgg cgttcaacgc atggtgcgtt
      901 ccgacagcgg cgcatcaggt gtgatgttca ccctcgacac cgaatccggc tacaaccaag
      961 tcgtctttgt tacctcctct tacggtctgg gcgaaaacgt cgtacaaggc gcggtcaacc
     1021 cggacgaatt ttatgtgttc aaacccacgc tcaaagcaag caaacccgcc atcctgcgca
     1081 agaccatggg ttcgaaacac atcaaaatga ttttcaccga caaagccgaa gccggcaaat
     1141 cggtaaccaa cgtcgaagtc cccgaagaag accgcaaccg cttctccatt accgacgaag
     1201 aaatcaccga gttggcacac tacgcgctga ccatcgaaaa acactacggc cgcccgatgg
     1261 atatcgaatg gggacgcgac ggcctggacg gcaaactcta catcctgcaa gcccgccccg
     1321 aaaccgtcaa atcccaagaa gaaggcagcc gcaacctgcg ccgctacgcc atcaacggcg
     1381 aaaaaaccgt cttgtgcgaa ggtcgtgcca tcggtcaaaa agtcggtcag ggcaaggtgc
     1441 gcctgattaa agatacttcc gagatggatt ccgtcgaagc cggcgacgta ctggttaccg
     1501 acatgaccga tccggattgg gaacccgtga tgaaacgtgc ttccgccatc gtgaccaacc
     1561 gcggcggacg cacctgccac gccgccatca tcgcgcgcga actgggtatt cctgccgtcg
     1621 tcggctgcgg caatgcgacc gaactcttgg aaaacggtca ggaagttacc gtatcctgtg
     1681 ccgaaggcga taccggcttt atctatgccg gcctgctgga cgtacaaatt accgatgtcg
     1741 ccttggacaa tatgccaaaa gcacccgtca aagtcatgat gaacgtcggc aatcccgaac
     1801 tcgcattcag cttcgccaat ctgcccagcg aaggcatcgg cttggcgcgt atggaattta
     1861 tcatcaaccg ccaaatcggc atccacccga aagccttgtt ggaatttgac aaacaagacg
     1921 acgaactgaa agcggaaatt atccgccgca tcgccggtta cgcatcccct gtcgacttct
     1981 acgtcgataa aatcgccgaa ggcgtggcaa cgcttgccgc atcggtttat ccgcgtaaaa
     2041 ccatcgtccg tatgtccgac ttcaaatcca acgaatacgc caacctggtc ggcggcagcg
     2101 tatacgaacc gcatgaagaa aacccgatgt tgggcttccg tggtgcggcg cgttatgttg
     2161 ccgagagctt caaagactgt ttcgccttgg aatgcaaagc cttgaaacgc gttcgtgacg
     2221 aaatgggtct gaccaacgtc gaaatcatga ttccgttcgt ccgcactttg ggcgaagccg
     2281 aagcagtggt taaggcattg aaagaaaacg gcttggaacg cggcaaaaac ggcctgcgcc
     2341 tgattatgat gtgcgagctg ccgagcaacg cggtattggc ggaacaattc ctgcaatact
     2401 tcgacggctt ctccatcggc tcgaacgaca tgacccagct gaccctcggc ctcgaccgag
     2461 acagcggctt ggtgtccgaa tcgtttgacg aacgcaaccc tgccgtcaaa gtgatgctgc
     2521 atcttgccat ctccgcctgc cgcaagcaga acaaatatgt cggtatctgc ggtcaaggtc
     2581 cgtccgacca tccggacttt gccaaatggc tggttggaga aggcatcgaa agcgtgtctc
     2641 tgaacccgga taccgtcatc gaaacttggc tgtatttggc gaatgaattg aacaaataat
     2701 caattcccat acccccaagc ctgaaaagcg cgggggtatt ttttccaagc agctccgttc
     2761 agacggcatt tcctgtcgat gccccgtccg cgataatatt tgacacccac gcgccgactg
     2821 cctacaattc ccccctctcc gagcaaccgg caacagtcag cttcttcttt cagacggcat
     2881 ccacccgtct tttcctttct attctatata tcattgatta tgcacgtctc cgaattacaa
     2941 accctgcaca tttccaaact cttagaattg gcggaagaac acggcatcga aaacgccaac
     3001 cgattccgca aacaagacct cgtatttgcc atcgtccgcc agatgatgaa aaaaggcgag
     3061 ggttttacct gctccggcac gctcgaaatc ctgcccgacg gcttcggctt cctccgcagc
     3121 gcggacacgt cctatcttgc cggccccgac gacatctatg tctcgcccac tcaaatccgc
     3181 cgcttcaacc tgcatacggg cgacaccatc gaaggcagcg tgcgcgtccc caaagacaac
     3241 gaacgctatt ttgccttggt cagactggat tccatcaatg gcgaccaccc ggaagtatgc
     3301 cgccataaaa tcctgtttga aaacctgacc ccgctgtttc cgaccgaaca gttgaagctg
     3361 gaacgcgact taaagtccga agaaaacctg accggacgcg ccatcgacct gatttcgccc
     3421 atcggcaaag gtcagcgcgc cctcttggtt gccccgccca aaatcggtaa aaccgtgatg
     3481 ctgcaaaaca ttgcccacgc cgttaccgca aactatcctg aagtcgaact catcgtcctc
     3541 ttgattgacg aacgccccga agaagtaacc gaaatgagcc gttccgtccg aggtgaagta
     3601 gtctcctcca cctttgacga accggcgcaa cgccacgtcc aagttgccga aatggtgctt
     3661 gaaaaagcca agcgtatggt ggaacacaaa aaagacgtgg tcatcctgct ggattcgatt
     3721 acccgccttg cccgcgccta caataccgtc gtccccgcct cgggcaaaat cctgaccggc
     3781 ggtgtcgatg ccaacgcgct gcaccgcccc aaacgtttct tcggtgcggc gcgcaacgtg
     3841 gaagaaggcg gttcgctgac cattatcgcc accgcattgg ttgaaaccgg cagccgtatg
     3901 gacgatgtga tttacgaaga attcaaaggt accggcaata tggaattgca cctcgaccgc
     3961 cgtatggcgg aaaaacgcct cttccccgcc atcaacatca acaaatccgg cacgcgccgc
     4021 gaagagctgc ttgtgccgaa cgaccagttg caacgtatgt ggttactgcg caagttcctg
     4081 cacccgatgg acgaaatcga agctaccgag ttcttaaacg gaaaaatcaa agcatctaaa
     4141 aataatgatg atttctttga actgatgcgc ggaaaataaa cgcgccgccc gcattaatgc
     4201 gaaatgccgt ctgaagcctg aaaatcgggt ttcagacgac attttcattc gcacggccgg
     4261 cgcagctcct cccccccccg ctaacggcgc aaccgccggc agtgtccgtg tccgcctgcc
     4321 gaaggcgcgg cctttgcaaa accggctcga acgcatccct accggcaatg aaaaccgatg
     4381 cgggaacttg attcaaggtt gcgccgaacc gcgcccattt ttgtataaat tttattttct
     4441 a
//
LOCUS       DAXFZM010000115         4330 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.116, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000115 DAXFZM010000000
VERSION     DAXFZM010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4330)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4330)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4330
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.116"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            1..223
                     /locus_tag="ACFJAG_001957"
                     /pseudo
     CDS             1..223
                     /locus_tag="ACFJAG_001957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017805306.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
     gene            complement(221..415)
                     /locus_tag="ACFJAG_001958"
                     /pseudo
     CDS             complement(221..415)
                     /locus_tag="ACFJAG_001958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215773.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor"
     gene            810..2147
                     /gene="ribBA"
                     /locus_tag="ACFJAG_001959"
     CDS             810..2147
                     /gene="ribBA"
                     /locus_tag="ACFJAG_001959"
                     /EC_number="3.5.4.25"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003935 - GTP cyclohydrolase II activity
                     [Evidence IEA];
                     GO_function: GO:0008686 -
                     3,4-dihydroxy-2-butanone-4-phosphate synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP
                     cyclohydrolase II"
                     /protein_id="HFC3981171.1"
                     /translation="MTDTAGLRRRNLRQWIAEHYGGLQNRFAEAVALNTGELSALLKN
                     KSFGEKKARKIEQAAKMPAFWLDTEHTGRPPGHTGKHTMSHISPIPEILADIKAGKMV
                     IITDAEDRENEGDLLMAAQFVTPEAVNFMIKHARGLVCLPMEGAMVEKLGLPMMTQKN
                     GAQYGTNFTVSIEAAHGITTGISAADRALTIQTAVSPTAKPADIVQPGHIFPLRAQKG
                     GVLVRAGHTEAGVDLAQMNGLIPASVICEIINDDGTMARMPELMKFAEEHKLKIGTIA
                     DLIEYRSRTESLLEDMGDAPVQTPWGEFQQHVYVDKLSGETHLALVKGTPSADTETLV
                     RVHEPFSVMDFIQANPRHSWSLPKALERVQQAESGVVILLHHTEDGASLLDRTLPKGA
                     NQAYKWDSKSYGIGAQILAGLHVKKLRVLGQPSSFTGLTGFGLEVVGFEKAEK"
     gene            complement(2310..2426)
                     /locus_tag="ACFJAG_001960"
     CDS             complement(2310..2426)
                     /locus_tag="ACFJAG_001960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter"
                     /protein_id="HFC3981172.1"
                     /translation="MPSESLSDGILFGLENTYAVLSPKERIQKTKATGIHRK"
     gene            complement(2458..4059)
                     /locus_tag="ACFJAG_001961"
     CDS             complement(2458..4059)
                     /locus_tag="ACFJAG_001961"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent DNA methyltransferase"
                     /protein_id="HFC3981173.1"
                     /translation="MTEQHFTEQIKSLIDSLKTICANYGLGNDGNEFKIISQAFLYKF
                     LNDKYDFEVKKIRKEKPDEPIEFVNMDIDGKTAVLKPEHSIKYLSERQNGADFAKLFD
                     DTLTDIAAHNAELFSVKTEGGAKIVLFERISQYITDEGRRDDFCRALISKLAGFSFEA
                     IFAQKFDFFATIFEYLIKDYNSNSGGKYAEYYTPHAVARIMADILVPEDVRGQIRSVD
                     VYDPSAGSGTLLMNVAHAIGEDKCMIYTQDISQKSSNLLRLNLILNNLVHSLNNVVQG
                     NTILSPAHKDASGCLKKFDFIVSNPPFKLDFSDFRDRLESDENHERFFAGIPKIKPTK
                     KEKMEIYQLFIQHILFSLKENGKAAIVLPTGFITAKSGIDKKIREYLVENKMLAGVVS
                     MPSNIFATTGTNVSILFIDKTNKDKVVLIDASGLGEKIKDGKNQKTVLSCEEEQKICN
                     TFTNKQAVEDFSVVVGYDEIKAKNHSLSAGQYFEVKIDYVDISADEFAQKIAGFSADL
                     DKLFAESAELEKEIKDRLAMLKFNS"
     gene            complement(4126..>4330)
                     /locus_tag="ACFJAG_001962"
     CDS             complement(4126..>4330)
                     /locus_tag="ACFJAG_001962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981174.1"
                     /translation="VTLDQRQELLNYLAEYNNNILKFNADGSRVEISTDVQLKHLLYG
                     IDERYYTTALGKEKRLANSVQPI"
BASE COUNT         1102 a         1158 c          953 g         1117 t
ORIGIN      
        1 aagaacagcg gcagagttgg taggcgttaa taaaaatacc gcagcctatg attttcatcg
       61 tttacgatga ctgatttatc aaaacggtcc gcatttagaa atgtttgatg gcgaagtaga
      121 agcagatgaa agttattttg gcggacaacg caaaggtaaa cgcggtcgcg gtgctgccgg
      181 aaaagtcgca gtattcaggc ttctcaaacg aaatggcaag gtttcctttg ccgtccgtta
      241 tgtacgtttc gtaacattcg aagacttcct gaaccctgcc cgccgtttcg gtttccgtac
      301 ccccctgtta gataaggggg ggaagattcg aagcggttgc cggcttcctg ccgtccgccg
      361 gcgcgtccgt catcacgccg gcaaccgcct ttttcatccc ttgcttatct tccatggtgc
      421 gaatcctcaa aaacgggcaa aaaaaagccc tgttacttgt agaaagtaaa aggcgatccg
      481 tccggttttt atcgggaagg cggcattcat cataggattg ccggtattgc gcctgctcgt
      541 accgcctatg ccgtacccgg caatcaaggc tttttatcag aatttttttc ggaataaccc
      601 tccggaaacc ccataatcag aagcgtgcgg gaagaaacag ccgccccgcc ggcggggttg
      661 cggcaatgcc gtctgaagcc acgaatccgg cttcaaacgg catctgttta ccaaaaggca
      721 aataatccga tttggcgaaa aacaaatttg ctttttagta aatacgcgct tacaatccgc
      781 tacatccgat ttctacaaag gataaaacga tgaccgacac agccggcttg cgccgccgca
      841 acctgcggca atggatagcg gaacactacg gcggactgca aaaccgtttt gccgaagccg
      901 ttgccctcaa cacaggcgaa ctctccgccc ttttgaaaaa caaatccttc ggcgagaaaa
      961 aagcccgcaa aatcgaacag gcggcaaaaa tgcccgcctt ctggctcgat accgaacaca
     1021 ccggccgacc gcccggacac acaggaaaac acaccatgtc ccatatttcc cccatccccg
     1081 aaatcctagc cgacatcaaa gccggtaaaa tggtcatcat caccgatgcc gaagaccgcg
     1141 aaaacgaagg cgacctgctg atggcggcgc aattcgttac ccccgaagcc gtcaacttta
     1201 tgatcaaaca cgcgcgcggc ttagtctgcc tgcctatgga aggtgcaatg gtcgaaaaac
     1261 tcggtctgcc gatgatgacc caaaaaaacg gcgcgcaata cggtaccaac tttaccgttt
     1321 ccatcgaagc cgcgcacggc attaccaccg gcatttccgc cgccgaccgc gccctgacta
     1381 ttcaaaccgc cgtttccccg accgccaaac ccgcagacat cgtccaaccc ggtcatatct
     1441 tcccgcttcg cgcccaaaaa ggcggcgtac tcgtccgtgc cggacacacc gaagccggcg
     1501 tcgacttggc gcaaatgaac gggctgattc ccgcctccgt catctgcgaa atcatcaacg
     1561 acgacggcac gatggcgcgt atgcccgaac tgatgaaatt cgccgaagaa cacaagctca
     1621 aaatcggcac gattgccgac ctcatcgaat accgcagccg caccgaaagc ctgctcgaag
     1681 atatgggcga cgcgcccgta caaactccgt ggggcgagtt ccaacaacac gtttacgtcg
     1741 acaaactctc cggcgaaacc cacctcgccc tcgtcaaagg cacaccctcc gccgacaccg
     1801 aaaccctcgt ccgtgtccac gaacccttca gcgtgatgga cttcatccaa gccaatccgc
     1861 gccattcctg gtcgctgccc aaagcccttg agcgcgtcca acaggccgaa agcggcgtcg
     1921 tcatcctcct gcaccacacc gaagacggcg catccctgct cgaccgcacc ctacccaaag
     1981 gcgcaaacca agcctacaaa tgggacagca aaagctacgg catcggcgcg caaatcctcg
     2041 ccggcctcca cgtcaaaaaa ctgcgcgtcc tcggccaacc gtcatctttc accggcctca
     2101 ccggcttcgg cctcgaagtc gtcggctttg aaaaagcgga aaaataatat agtaaattca
     2161 aatgctttat atttgcttca tttattgcat tatttccgta caaacgaaaa cccggtctgt
     2221 tgggttggat tttgcttttt tcggatttcg ggtaacttct aattcgtcat tcccgcgcag
     2281 gcgggaatcc ggttcgtcgg gtttttgtgt catttccgat gaattcctgt ggctttggtt
     2341 ttttggattc tctctttcgg ggaaagaacg gcataagtat tttccaaacc aaacaaaatg
     2401 ccgtctgaaa ggctttcaga cggcatttta agtttgaccg gtttcattca tcggtattta
     2461 tgaattgaat ttcaacatcg ccaatctatc cttaatctcc ttttccaatt cggcagattc
     2521 ggcgaaaagt ttatccaaat ccgctgaaaa tcccgctatt ttttgcgcaa attcgtcggc
     2581 ggatatatcc acataatcaa tttttacctc aaaatactgc cccgccgaca agctgtgatt
     2641 cttcgctttg atttcatcgt agccgaccac cacgctaaaa tcttccactg cctgtttgtt
     2701 cgtgaaagta ttgcagattt tttgttcttc ttcgcaggaa agtacggttt tttggttttt
     2761 gccgtctttg attttttcgc ccaagcccga tgcgtcaatt aataccactt tgtctttatt
     2821 ggttttgtcg ataaacagga tggaaacatt ggttcccgtc gtggcgaaaa tattggaagg
     2881 catggacacc acgccggcaa gcattttgtt ttccaccaaa tattcgcgga tttttttgtc
     2941 gatgcccgat tttgccgtga taaagccggt cggtaataca atcgctgcct tgccgttttc
     3001 tttcaggctg aacagaatat gctggataaa aagctgatag atttccatct tctctttctt
     3061 tgttggcttg attttcggga taccagcaaa aaagcgttcg tggttttcat cgctttccag
     3121 ccgatcgcgg aaatcgctga aatccaattt aaacggcgga ttggaaacaa tgaaatcaaa
     3181 ttttttcaga cagcctgaag cgtctttgtg ggcgggcgac aaaatcgtat tgccctgaac
     3241 cacattattc aaagaatgca ccaaattatt caaaatcaga ttcagccgca gcagattgga
     3301 cgatttctgc gaaatatcct gcgtataaat catacatttg tcttcgccta tggcatgggc
     3361 gacgttcatc aacagcgttc ccgaaccggc cgacgggtcg taaacgtcca cgctgcggat
     3421 ttgcccgcgc acatcttccg gcaccaaaat atccgccata atccgcgcca ccgcatgcgg
     3481 cgtgtagtat tcggcatatt tgccgccaga attactgttg tagtctttaa tcaggtattc
     3541 aaaaatcgtg gcgaaaaagt cgaatttttg cgcaaaaatc gcctcgaagc tgaaacccgc
     3601 cagcttggaa atcagcgcgc ggcaaaaatc gtcgcggcga ccttcgtcag taatgtactg
     3661 actaatacgc tcaaacaaca cgattttcgc cccgccttcg gttttcacag aaaacaactc
     3721 agcattatgt gcagcgatgt cagtgagcgt atcgtcaaag agtttggcaa agtctgcgcc
     3781 gttttgccgc tccgacaaat acttgatgga atgttcgggc tttaaaaccg ctgtttttcc
     3841 atcaatatcc atattgacga actcgatcgg ctcgtcgggc ttttctttgc gaattttttt
     3901 aacttcaaaa tcgtatttgt cgtttaggaa tttatacaaa aacgcctgac tgatgatttt
     3961 aaattcgttg ccgtcattgc ccaaaccata gttggcgcag atggttttta agctgtcgat
     4021 tagggatttg atttgttcgg taaagtgttg ttcggtcatg gaatgtctcg gtttgttgct
     4081 agcgtcgctt aaattttgtt tagcattagt tggtttgctg gcagattaaa taggttgaac
     4141 actatttgcc aaccttttct cttttcctaa tgctgttgtg taataacgtt catcaatacc
     4201 atataacaaa tgtttcagct gtacatcagt agaaatttct acacgagagc catctgcgtt
     4261 aaatttcaag atattattat tatattcagc aaggtaattt aatagttctt gtctttgatc
     4321 tagcgtcacg
//
LOCUS       DAXFZM010000116         4301 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.117, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000116 DAXFZM010000000
VERSION     DAXFZM010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4301)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4301)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4301
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.117"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            339..1259
                     /gene="ribF"
                     /locus_tag="ACFJAG_001963"
     CDS             339..1259
                     /gene="ribF"
                     /locus_tag="ACFJAG_001963"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003919 - FMN adenylyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HFC3981175.1"
                     /translation="MKIRLGRHNAPDFPHGAAVTIGNFDGVHLGHKHILQKLRLEADT
                     RGLPVVAVVFEPQPKEFFALRTGKTPPCRISPLRTKLELLEGTGCVDAAWVLRFDRNF
                     SEISAQAFIDRLLRQTLNTRYLLVGDDFRFGAGREGCFELLAQQPDMQTERTPSVIVE
                     DIRTSSTAVRQALSDGNLAYAKKLLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHR
                     YALGGVFVVEADGAFGTRRGVASFGFNPTVGGGCSQKLEVHLFDFQGDLYGQRLNVRF
                     LHKLRDEEKFDGMEELKRRIEADMEAAKCW"
     gene            1401..4190
                     /gene="ileS"
                     /locus_tag="ACFJAG_001964"
     CDS             1401..4190
                     /gene="ileS"
                     /locus_tag="ACFJAG_001964"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004822 - isoleucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006428 - isoleucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HFC3981176.1"
                     /translation="MTDYSKTVNLLESPFPMRGNLAKREPAWLKSWYEQKRYQKLRET
                     AKGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI
                     EVMVEKLHGKDMPKARFRELCREYAAEQIARQKKDFIRLGVLGDWDNPYLTMDFKTEA
                     DTVRMLGEIYKSGYLYRGAKPVQFCLDCGSSLAEAEVEYKDKVSPAIDVAYPFKNTVA
                     LAAAFGLAGIEGKAFAVIWTTTPWTLPASQAVSAGADVVYQLIDTPKGKLVLAKDLAE
                     GALKRYGFSDGIAILAETTGDKLENLHMNHPFLERDIPMLNGEHVTTDAGTGLVHTAP
                     AHGLEDYAVCNKYGIELYNPVNAEGKYISETPRVAGMSVWEANPVILQWPEETGNLLA
                     SSKIEHSYAHCWRHKTPLIYRATGQWFVGMDKAGSDGKTLRDKAIKAVDDTEFFPPWG
                     RARLESMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAELLEKVAQRIEEKGIE
                     AWFSLDKSELLSAEDCEHYDKLPDTMDVWFDSGSTHYSVVKQREELEWPADLYLEGSD
                     QHRGWFQSSMLTGCASSMGRAPYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEVYNEFG
                     ADILRLWAASTDYSGELAISKEILKRVTESYRRIRNTLSFLFANLSDFNPIEDAVQQA
                     DMVEIDRYALVLARQLQERVAGDFYPRYAFHFAVKEMVSFCSEDLGAFYLDILKDRLY
                     TTKADSRARRSAQTALYHITRSLVLLIAPILCFTGEEAWDIIGGGEEDSVLFHTWHEF
                     PAINEKAEAELVKKWTAIREAREAVTAAIEPLRADKTVGSSLQAEAEITAPEEMAGYL
                     NALGEELRFALLVSKAEVKVGDELAVAAKAGDGEKCERCWHYTRDVGAVAGYETVCKR
                     CAENVGGEGETRHYA"
BASE COUNT         1049 a         1205 c         1159 g          888 t
ORIGIN      
        1 cgccgcctgc gctgcggaag agaagagaag agaagagaag agaagagaag agaagagaag
       61 gttttttgcg ggctggattc attttcggct ccttattcgg tttgaccggt taaaaaaaga
      121 ttttcactga tgttgaaagg cggattatat cgggttccgg gcggtgtttc aatacatagc
      181 accgcgcctg ctgcgcgttt tatgcgtttg gcgcgttcgg cggcgggaaa tttgcctact
      241 tttcccgcgt cgggcgggcg gaacgggcgg cacactgtct ataaaccgca ataccgttta
      301 caatgaccgc ctgtttcacc acatacccga acgcaacaat gaaaatcagg ctggggcggc
      361 acaacgcgcc cgactttccg cacggggccg ccgtaaccat aggcaatttc gacggcgtgc
      421 acctcggaca caaacacatc ctccaaaaac tccgcctcga agccgatacg cgcggattac
      481 ccgtcgtggc cgtcgttttc gaaccccaac ccaaagaatt tttcgcactc cgtaccggca
      541 aaaccccgcc ctgccgtatc agccccctgc gtaccaaact ggaattgctg gaagggacgg
      601 gttgcgtcga tgccgcctgg gttttgcgtt tcgatcggaa tttttccgaa atatccgcgc
      661 aagcatttat cgaccgcctg ctgcgtcaaa ctttgaatac gcgctatttg ctcgtcggcg
      721 atgattttcg tttcggcgcg gggcgcgaag gctgttttga acttttggca caacagcccg
      781 atatgcaaac cgagcgcacg ccttccgtca tcgtcgaaga catccgcacc agcagcacag
      841 ccgtccgcca agccctttca gacggcaacc ttgcctatgc gaagaaactt ttggggcacg
      901 actacgtttt ggggggcagg gtggtgcacg gcagaaaact cggacgcacc ttaaacgccc
      961 cgaccgccaa tatccggctg cccggccacc gttatgccct cggcggcgtg ttcgtcgtcg
     1021 aggcggacgg cgcattcggc acgcggcgcg gcgtggcgag cttcggcttc aatccgaccg
     1081 tcggcggcgg ctgttctcaa aagcttgaag tccacctgtt cgactttcaa ggcgacctgt
     1141 acggacaacg gttgaacgtc cgcttcctgc acaaactgcg cgacgaggaa aagtttgacg
     1201 gtatggaaga actgaaaagg cggattgaag ccgatatgga agccgcaaag tgttggtaga
     1261 aaaaccttat acaaaccatc cgattgggct acaatcagcc ttttaactgt tcagacggca
     1321 caggggtttc ccgttgtgaa atactgtttg aggcgcaatg ccgtctgaaa ccgaaatatt
     1381 gtaacaatag agattaaaaa atgaccgatt acagtaaaac cgtcaacctg ctcgaaagcc
     1441 cgtttccgat gcgcggcaat cttgccaagc gcgagcctgc gtggctgaaa agctggtacg
     1501 agcaaaaacg ttaccaaaaa ctgcgcgaaa ccgccaaagg ccgtccgaaa ttcatcctgc
     1561 acgacggccc gccgtatgcc aacggcgaca tccatatcgg tcatgccgtc aataaaattc
     1621 ttaaagacat tattatccgc agcaaaaccc aagccggttt tgacgcgcct tatgtaccgg
     1681 gttgggactg ccacggcctg cccatcgaag tgatggtgga aaaactgcac ggcaaagata
     1741 tgcctaaagc ccgtttccgc gaattgtgcc gcgaatatgc cgccgaacag attgcccgtc
     1801 agaaaaaaga ctttatccgc ttgggcgtgt tgggcgactg ggacaatcct tacttgacca
     1861 tggatttcaa aaccgaagcc gataccgtgc gtatgctcgg cgaaatctac aaatccggct
     1921 atctctaccg gggcgcgaaa ccggttcagt tttgcttgga ttgcggatct tcgctggcgg
     1981 aagcggaagt ggaatacaaa gacaaagtat cgcctgcgat tgacgttgcc tatccgttta
     2041 aaaacaccgt cgcgcttgcc gccgcattcg gcttggcagg tatcgaaggc aaagcgtttg
     2101 ccgtcatttg gacgaccacg ccttggactt tgcctgcgag ccaggccgtg tctgccggcg
     2161 cggacgtggt gtatcaatta atcgatacgc ccaaaggcaa attggtgctg gcgaaagatt
     2221 tggcggaagg cgctttgaaa cgctacggct tttcagacgg catcgccatc cttgccgaaa
     2281 ccaccggcga caagctggaa aacctgcaca tgaatcatcc gttcctcgaa cgcgatattc
     2341 ccatgctcaa cggcgaacac gttaccaccg atgccggtac cggcttggtg catactgcgc
     2401 ctgcgcacgg tttggaagac tacgccgtct gcaataaata cggcatcgag ctttacaacc
     2461 ctgtcaacgc cgaaggcaaa tacataagcg aaacgcctcg tgtcgcaggc atgagcgttt
     2521 gggaggcgaa tcccgtcatc ctgcaatggc cggaagaaac cggcaacctc ttggcaagca
     2581 gcaaaatcga acacagctac gcccactgct ggcgccacaa aaccccgctg atttaccgag
     2641 cgacaggtca gtggtttgtc ggcatggaca aagccggcag cgacggtaaa accctgcgcg
     2701 acaaagccat caaagccgtg gacgacaccg aattcttccc gccatggggt cgtgcgcgtt
     2761 tggaatccat gattgaaggc cgtcctgact gggtggtttc acgccaacgc tattggggca
     2821 cgccgatgac tttctttgtt cacaaagaaa cgggcgagct gcatccgaac tctgccgaac
     2881 ttttggaaaa agtcgcgcaa cgcatcgaag aaaaaggcat cgaggcttgg ttctccctcg
     2941 ataaaagcga attattaagc gcggaagatt gcgaacatta cgacaaactc cccgatacca
     3001 tggacgtatg gttcgactca ggctcgacgc attattccgt tgtaaaacaa cgcgaagaat
     3061 tggaatggcc ggctgacttg tacctcgaag gcagcgacca acaccgcggc tggttccaat
     3121 cctctatgct gaccggttgc gcctcatcca tgggacgcgc accgtataaa cagctgctga
     3181 cccacggttt cgtggttgac caaaacggcc gcaaaatgtc gaaatccatc ggcaacgtcg
     3241 tcgcgccgca agaagtctat aacgaattcg gcgcggacat cctgcgcctg tgggcggcat
     3301 ccaccgatta cagcggcgaa ttggcgattt ccaaagaaat cctcaaacgc gtaaccgaaa
     3361 gctaccgccg tatccgcaat accttgagct tcctgtttgc caacctcagc gacttcaacc
     3421 cgattgaaga tgccgtgcaa caggcggata tggtggaaat cgaccgctac gccttggtat
     3481 tggcgcgtca acttcaagaa cgcgttgccg gcgattttta tccgcgttac gccttccatt
     3541 ttgccgtaaa agaaatggtt tctttctgct cggaagactt gggcgcgttc tacctcgaca
     3601 tcctgaaaga ccgcctctac accaccaaag ccgacagccg cgcccgccgc agcgcgcaaa
     3661 ccgccctgta ccacatcacg cgcagcctgg ttctcttgat tgcaccgatt ttgtgcttca
     3721 ccggcgaaga agcgtgggac atcatcggcg gcggcgaaga agacagcgtc ctcttccata
     3781 cttggcacga gttcccggcc atcaacgaaa aagccgaagc cgaactggtg aaaaaatgga
     3841 cggcaatccg cgaagcgcgc gaagcagtaa ccgccgccat cgagcctttg cgcgccgaca
     3901 aaaccgtcgg ttcgtccttg caggcggaag ccgaaatcac cgcgccggaa gaaatggccg
     3961 gctatctgaa tgctttgggc gaagaattgc gctttgccct gctggtgtct aaagcagaag
     4021 tgaaagtcgg tgatgaactt gccgttgccg ccaaagccgg cgacggcgaa aaatgcgaac
     4081 gctgctggca ctacacccgc gatgtgggcg cggttgcagg ttatgaaacc gtctgcaaac
     4141 gctgtgcgga gaatgtcggc ggagaaggcg aaacgcgcca ttacgcctga taaagtttga
     4201 gcaaatgccg tctgaaaccg ccaaacagta tttcagacgg cattttttgt gccgcgattt
     4261 gtcttcataa tggcggaggg gtttcgagat tgcggtgttg t
//
LOCUS       DAXFZM010000117         4254 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.118, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000117 DAXFZM010000000
VERSION     DAXFZM010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4254)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4254)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4254
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.118"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..185
                     /locus_tag="ACFJAG_001965"
     CDS             <1..185
                     /locus_tag="ACFJAG_001965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981177.1"
                     /translation="YDLLRQIGEVGRWVGMVFESVVKNLHCNKITKIYIEICAVQFMN
                     RLTVIGRRGGCVRMRL"
     gene            214..696
                     /locus_tag="ACFJAG_001966"
     CDS             214..696
                     /locus_tag="ACFJAG_001966"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HFC3981178.1"
                     /translation="MAIAKNSVVSLHYEMYDANNQLLDKTEEPIAYLHGGYDGIFPLV
                     EEALHGKDAGDTVDVALSSDDAFGEQDSELVRIEDAGAFPVEVEVGMMFEADDPETGD
                     VVVYRVTDVADGKAVVDGNHPLAGMKIRFKATVESVRDASDEEIAHGHVHGSHGHYHH
                     "
     gene            783..1595
                     /gene="hpnC"
                     /locus_tag="ACFJAG_001967"
     CDS             783..1595
                     /gene="hpnC"
                     /locus_tag="ACFJAG_001967"
                     /EC_number="2.5.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004311 - farnesyltranstransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="squalene synthase HpnC"
                     /protein_id="HFC3981179.1"
                     /translation="MSVGHYENFPVGSLVLPRRLRKPVHAVYAFARTADDMADEGSMP
                     SEARLSGLEGLRRELDVLASGGRSAHPLIARLDAEAVVPFGLDLQPFYDLLSAFSQDV
                     VKTRYAHFGDLTDYCRRSANPVGRIMLALYGKTDAVCVAQSDGICTALQLVNFWQDVA
                     VDWQKGRVYIPQDDLLKFGVSEEQIAAGRADAAFQRLMAYECRRAFRMLKAGSPLARE
                     LKGRIGLELRMIVLGAQLILQKLDACRYDVFAQRPVLDKKDWLIMLKRALWK"
     gene            complement(1668..2138)
                     /locus_tag="ACFJAG_001968"
     CDS             complement(1668..2138)
                     /locus_tag="ACFJAG_001968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1841 family protein"
                     /protein_id="HFC3981180.1"
                     /translation="MYDVNTHDVRRFFARVWQQRLNPLQLGALEQKALRIVEAHPEYH
                     RYLERIEDHLDTDWLPENGESNPFLHMSLHLSVQEQAGIDQPHGIRAIHDTLCAKRGW
                     PEAEHEMMEALAETLWTAQRYGTGLDVNFYMTRLRKLIGLGAEDQARLNPHEIA"
     gene            2229..4070
                     /locus_tag="ACFJAG_001969"
     CDS             2229..4070
                     /locus_tag="ACFJAG_001969"
                     /EC_number="1.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0030554 - adenyl nucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0047134 - protein-disulfide reductase
                     (NAD(P)H) activity [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD"
                     /protein_id="HFC3981181.1"
                     /translation="MRTNYLSETDSIMKKLICLFAVFLMLCGRAFALDANDLLPPEKA
                     FAPELTVADDGVNVRFRIADGYYMYQAKIVGKTDPADLLGQPSFSKGEEKEDEFFGRQ
                     TVHHHEAQVAFPYAKAVGEPYKLVLTYQGCAEAGVCYPPVDTEFDISGNGTYHPQTDE
                     PASAKDRFLQPSSQNGSGALPPPKGDEGGDGRFKLSWDTLNANLLAFFLAGLGLSFTA
                     CMYPLLPIVSSIVVGDKKAGKARAFVLSVVYVQGLALTYTLVGIVAGLTGALLTVWLQ
                     QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLSGGKIVSVFIMGILSA
                     LIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPLIAIGTFGGHILPKAGD
                     WMNAVKYAFGFILLAVAVYLATPHLPYYLVVALYTLLMLVPAFMLLVNGRRQKRRPKA
                     VAFALGSILLIGGAWFGWQGANGKTTALHHFLTLNPPAEAGKFSEHGKMFADTAALKA
                     AMDTALKEHPDKPVVLDFYADWCISCKEMAVYTLNQPEVHQAVDMERFFQIDVTANTP
                     EHQALLKEYGLFGPPGVFVVRADGSRSEPLLGFVKADKFIEWYEQNR"
BASE COUNT          882 a          979 c         1297 g         1096 t
ORIGIN      
        1 tgtatgattt attaaggcag attggggaag tcggcagatg ggtcggaatg gtttttgaga
       61 gtgttgtaaa aaatttacac tgcaataaaa taacaaaaat ttacattgaa atatgtgccg
      121 tacagtttat gaacaggtta acggtaatcg gccggcgcgg cggttgtgtt agaatgcgcc
      181 tgtaatcaat ctgctgttcc tgaaaggaca aatatggcta ttgcaaaaaa ttccgtggtt
      241 tcgctgcatt atgagatgta tgatgccaac aatcagcttt tggataaaac cgaagaaccg
      301 attgcgtatc tgcacggcgg ttacgacggc attttccctt tggtggaaga ggcgttgcac
      361 ggtaaggatg ccggcgatac ggtcgatgtg gcgctttcgt ccgacgatgc gttcggcgag
      421 caggattcgg agttggtccg tattgaagat gcgggcgcgt tccctgttga agtcgaagtc
      481 ggcatgatgt ttgaagccga cgatcctgaa accggcgatg ttgtcgtcta tcgtgtaacc
      541 gatgttgccg acggcaaggc ggtggtggac ggcaaccatc ctttggcagg catgaaaatc
      601 cgctttaaag ctacggttga aagcgtgcgc gatgcatccg atgaggaaat cgcacacggt
      661 catgtccacg gttcgcacgg tcattaccac cactgattgc cggcagcttg gaggtatctg
      721 atgccgtctg aaaagggttt gttccgtttc agacggcatt ttgtttgatg gatggagaag
      781 gtatgtcggt tgggcattat gagaattttc ccgtcggttc gctggttttg ccgcgcaggt
      841 tgaggaagcc ggttcatgcg gtgtatgcgt ttgcacggac ggcggacgat atggcggacg
      901 agggcagtat gccgtctgaa gccaggttgt cggggttgga gggtttgcgg cgcgagttgg
      961 acgtgttggc atcgggcggc cggtcggcgc atcctttgat tgcacgattg gatgccgagg
     1021 cggttgtgcc gttcggtttg gatttgcagc cgttttatga tctgctctcg gcgttttcgc
     1081 aggatgtggt taaaacgcgg tacgcgcatt tcggcgatct gaccgattat tgccggcgtt
     1141 ccgccaaccc tgtcggacgc attatgctgg ctttatacgg gaaaacggat gcggtgtgcg
     1201 tagcgcaaag cgacggtatt tgtacggctt tgcaactggt gaatttttgg caggatgtag
     1261 ctgtggattg gcaaaagggc agggtttata tcccgcagga cgatttgttg aaattcggtg
     1321 tttctgagga acagatcgca gcaggacggg cggatgcggc gtttcagcgg ctgatggcgt
     1381 atgagtgccg gcgtgcattc cgtatgctga aggcgggttc gcctttggcg cgcgaattga
     1441 aagggcgtat cggtttggaa ctccgtatga ttgtgttggg ggcgcagttg attttgcaga
     1501 aactggacgc gtgccgatac gatgtgtttg cacaacgccc cgttttggat aagaaggatt
     1561 ggttgattat gttgaaacgc gcgttgtgga aatgattggg ggaaaatgaa tgccgtctga
     1621 aaggggttgt tccgcttcag acggcatttt gcaggcggtc ggtatggtca ggcgatttca
     1681 tgcgggttta acctggcttg atcctctgca cccaagccga tgagtttgcg cagtcgggtc
     1741 atgtagaaat tgacatccaa accggtgccg tagcgttgcg ccgtccacag tgtttccgcc
     1801 agtgcctcca tcatttcgtg ttcggcttcc ggccagccgc gtttggcgca cagggtgtcg
     1861 tggatggcgc gtatgccgtg cggctggtct atgcccgcct gttcttggac ggacaaatgc
     1921 agcgacatat gcaggaaggg gttgctttcg ccgttttcgg gcagccagtc ggtgtccaga
     1981 tggtcttcga tgcgttcgag ataacggtgg tattcgggat gggcttcgac aatgcggagg
     2041 gctttctgtt ccaacgcgcc caattgcagc ggattgagcc gctgctgcca cacgcgggcg
     2101 aaaaagcggc ggacatcgtg ggtattgaca tcgtacatgg cgggtccgat aagatgttta
     2161 tggaaatagg ttcggataat ggcgggtttt acataaatta aatcctaccg tcaaccttac
     2221 catttataat gcggacaaat tatttgtctg aaacggattc gattatgaaa aaactgattt
     2281 gcctgttcgc cgtatttttg atgttgtgcg gacgggcttt cgcgctggat gcgaacgatc
     2341 tgctgccgcc ggaaaaggca ttcgcgccgg agcttactgt tgccgacgac ggcgtgaacg
     2401 tccgtttcag gattgccgac ggatactata tgtatcaggc gaaaatcgtc ggcaagaccg
     2461 atccggcgga tttgttggga cagccttctt tcagtaaggg cgaagagaag gaagacgagt
     2521 ttttcggcag gcagacggtt caccatcacg aggcgcaggt tgcctttcct tatgcaaagg
     2581 ctgtcggcga accgtataaa ttggttttga cctatcaggg ctgtgccgaa gccggcgtgt
     2641 gctatccgcc cgtggatacc gagtttgata tttccggcaa cggcacttac catccgcaaa
     2701 ccgacgaacc ggcatccgcc aaagaccgtt ttttgcagcc ttcctctcaa aacggcagcg
     2761 gggcgttgcc gcccccgaag ggggacgagg gtggcgacgg ccgtttcaag ctgtcttggg
     2821 atacgctcaa cgccaatctt ttggcgtttt ttctcgccgg tttgggcctg agttttaccg
     2881 cttgtatgta tcccctgttg ccgattgtgt ccagtatcgt ggtcggtgac aaaaaggcgg
     2941 gcaaggcgcg ggcgtttgtg ctgtccgtcg tttatgttca gggtttggct ctgacttata
     3001 cgctggtcgg cattgttgcc ggactgacgg gcgcgctgct gaccgtatgg ttgcagcagg
     3061 cttgggtcgt gttggcggca tcggctttga tggtcgtctt ggcgctgtct atgttcgggc
     3121 tgttcaacat ccagcttccc aacgccgtac agtcatattt ccaaaaccag agcagcaggc
     3181 tctccggcgg taaaatcgtt tccgtcttta ttatgggcat tctgtccgca ctgattgtcg
     3241 gaccgtgcgt cgccccgccg ctggcgtttg ccttgggcta tatcggtcag acgggcgatg
     3301 cggttttggg cggtttggca ctttacactt tggcgttggg caccggcgtg ccgctgattg
     3361 ccatcggcac gttcggagga catatcctgc ctaaggcggg cgattggatg aatgccgtca
     3421 aatacgcttt cggctttatc ctgcttgccg tcgccgttta cctcgccacg ccgcatttgc
     3481 cctattatct cgtcgtcgcg ctgtacacgc tgctgatgct ggttcctgcc tttatgctgc
     3541 tggtcaacgg acgcaggcag aaacgccgtc cgaaagctgt ggcattcgca ttgggcagca
     3601 tattgctgat aggcggcgcg tggttcggct ggcagggcgc aaacggcaaa acgaccgcgc
     3661 tgcaccattt cttgaccctc aatccgccgg ccgaagcagg caaattttcg gaacacggca
     3721 aaatgtttgc cgatactgcc gcgctgaagg cagcgatgga tacggcgttg aaagaacatc
     3781 ccgacaaacc tgtcgttttg gatttttatg ccgactggtg catttcctgc aaagaaatgg
     3841 cggtttacac gctcaatcag ccggaagtgc atcaggcagt cgatatggaa cgctttttcc
     3901 agatcgacgt aaccgccaac acgcccgaac atcaggcgtt gttgaaagaa tacggtctgt
     3961 tcgggccgcc gggcgtgttt gtcgtccgcg ccgacggcag ccgcagcgag ccgctgctgg
     4021 gttttgtcaa agcagacaag tttatcgagt ggtatgaaca aaaccgctga ttccgatgtt
     4081 tcaaatgccg tctgaagttc tcagacggca tttttgtcag acaggaaaac ggcaatatcc
     4141 gctatacaca cggaagcagt ccaaagatgt gaaaaccgtg tgtataagtc ggtttgcgta
     4201 ttgaaattaa aagataaaaa tacgatgatt aaaaaatagg cataagaaaa gata
//
LOCUS       DAXFZM010000118         4207 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.119, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000118 DAXFZM010000000
VERSION     DAXFZM010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4207)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4207)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4207
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.119"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..228
                     /locus_tag="ACFJAG_001970"
     CDS             <1..228
                     /locus_tag="ACFJAG_001970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MobC family plasmid mobilization relaxosome
                     protein"
                     /protein_id="HFC3981182.1"
                     /translation="KKTVKFQFPPEVVRVLAGMGNNLNQIAKALNTAAKVGTLGNVEA
                     LKATTELAALERSLNSLRDFLAKEKNGWQSQ"
     gene            213..842
                     /locus_tag="ACFJAG_001971"
     CDS             213..842
                     /locus_tag="ACFJAG_001971"
                     /inference="COORDINATES: protein motif:HMM:NF015397.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
                     /protein_id="HFC3981183.1"
                     /translation="MAVPMIVQFFNRGKGGGSGPIDYLLGKDRDREEARLLRGDPEET
                     AALINSSDYAKKYTAGCLSFEESNIPAEQKHALMDSFEECIFAGLDKDQYNCLWVEHR
                     DKGRLELNFVIPNIELLSGKRLQPYYYAADRGRVDAWRTMQNLTHGYSDPDDPAKRQS
                     MTQAKDLPRNTQEAAQSITEHHRRLRSPSPIRQAKKPRRRAGNAGKGRF"
     gene            926..1567
                     /locus_tag="ACFJAG_001972"
     CDS             926..1567
                     /locus_tag="ACFJAG_001972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MbeB family mobilization protein"
                     /protein_id="HFC3981184.1"
                     /translation="MSKISDLAKTFEQTSRTEAASIEQQTKADLETLRKNINEALKQS
                     EQKITADINARQLRMSKAVFKPYLWSLLGISAAGLIVIAGLFIAIWSVKNELDDLKQQ
                     RAEAERTLDLLETKTKGLTLENCPVENSKATRVCVATEKRMLDALAELESNHAAIEQR
                     MMKALTHLGERLAELEQENTSLAQQLASLAAELERQSEIRQRQSEILNQPAKR"
     gene            1614..1868
                     /locus_tag="ACFJAG_001973"
     CDS             1614..1868
                     /locus_tag="ACFJAG_001973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cryptic plasmid protein A"
                     /protein_id="HFC3981185.1"
                     /translation="MITENERDRRTAAWLIETYGAEAVAEAETRIAGARKPYPSNIAK
                     VLGASLPEALKRTENAAARQKLAGLQRMLDGKAVKTSQDL"
     gene            complement(1846..2124)
                     /locus_tag="ACFJAG_001974"
     CDS             complement(1846..2124)
                     /locus_tag="ACFJAG_001974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endoribonuclease VapD"
                     /protein_id="HFC3981186.1"
                     /translation="MYAISFDLVVADTAQNHPKGISQAYADIGYTLRKFGFTRIQGSL
                     YTCQNEDMANLFSAINELKALPWFPSSVRDIRAFRIEQWSDFTSLVKS"
     gene            complement(2124..2309)
                     /locus_tag="ACFJAG_001975"
     CDS             complement(2124..2309)
                     /locus_tag="ACFJAG_001975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5397 family protein"
                     /protein_id="HFC3981187.1"
                     /translation="MQTTIPTGSIRTFGDYGVMYIVGTPAEQLPDGDWLVNIELPESG
                     EHTQYKLSHIVQDPKAA"
     gene            complement(2312..2557)
                     /locus_tag="ACFJAG_001976"
     CDS             complement(2312..2557)
                     /locus_tag="ACFJAG_001976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981188.1"
                     /translation="MTRYAINRDALYSAFKDFLYSEINANPALKSATVDDLADIVLAK
                     KWRIFLPDGIKRTTAEKAAQRVLYMTNQPENQTQQEN"
     gene            complement(2554..2796)
                     /locus_tag="ACFJAG_001977"
     CDS             complement(2554..2796)
                     /locus_tag="ACFJAG_001977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH domain-containing protein"
                     /protein_id="HFC3981189.1"
                     /translation="MAYPKLKTTKRDVTAKELAKRFGCSTRTVFRAWSQSRADYLAEN
                     SISRDKPWEHFGISRATWYRRGKPMPSETDNQSETA"
     gene            complement(2800..3669)
                     /locus_tag="ACFJAG_001978"
     CDS             complement(2800..3669)
                     /locus_tag="ACFJAG_001978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation protein"
                     /protein_id="HFC3981190.1"
                     /translation="MSQLYTQPDLFLQERIPHKPYCKDFKEAPMLVRSYAAAIKRRYI
                     QVNPPHLRVFMLFDLDYEGAGLAWEDNNLPMPAWAAINRENGGAHLAYALSAPVLTAE
                     YGGRQKALRYLAALEAAYKAKLRGDVGFVSLITKNPEHPHWLTLRGVPDAIRGYDLEY
                     LADFVDLDKFKPYIGRSNVEAVGLSRNCTVFNLVSRWAHKNVLAFKQQGYTVQGWLKE
                     VHYQCMRVNGDFPVPMWEKEVKCISKSIANWVWYKFDIAASNRRFSELQAHRNSLRKT
                     TINAGRTKIITEL"
     gene            complement(3752..3976)
                     /locus_tag="ACFJAG_001979"
     CDS             complement(3752..3976)
                     /locus_tag="ACFJAG_001979"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981191.1"
                     /translation="MKNSGKNTHAALSELVSCFPQNAALLAGLGRAAALQALPLRLLA
                     SLNCGLENFEIRTPIGLLSDYGYFDIVVSS"
BASE COUNT         1144 a         1039 c         1130 g          894 t
ORIGIN      
        1 aaaaaaaccg tcaaattcca attcccgccc gaagtcgtgc gcgtccttgc aggcatgggt
       61 aacaacctga accaaatagc caaggccctg aacaccgccg caaaggtcgg cacgttgggc
      121 aatgtggaag cactcaaggc gacgaccgag ctggcagcgt tggaacgttc cttaaattcc
      181 ctacgggatt ttttagccaa agaaaagaac ggatggcagt cccaatgatt gtgcagtttt
      241 tcaatagggg gaaaggcggc gggagtggtc cgatagacta tcttctaggc aaagaccgcg
      301 accgagaaga agccagatta ttacgcggcg accccgaaga aaccgccgcc ctgataaaca
      361 gcagcgatta cgccaagaaa tacaccgccg gctgcctgag ctttgaagaa agcaacatcc
      421 ccgccgaaca gaaacacgcc ctgatggaca gcttcgaaga gtgtattttt gcaggcttgg
      481 acaaagacca atacaactgc ctatgggtag aacaccgaga caaagggcgt ttggaactca
      541 acttcgtgat accgaacatc gagcttttga gcggaaagcg gttacagccc tactactacg
      601 ccgccgacag aggaagagtg gacgcatggc gcaccatgca gaacctgacg cacggataca
      661 gcgacccaga cgaccccgcc aaacggcaga gcatgaccca agccaaagac ctgccgagaa
      721 acacgcagga agccgcacag agcatcacag agcatcacag acggcttaga agccctagcc
      781 ctatcaggca agctaaaaag ccgcgcagac gtgctggaaa cgctggaaaa ggtaggtttt
      841 gaaatatcac gagcgaccat cagcagcatc agcatcaaga acccggaccc aaaagggcgc
      901 aacatccgac tgaaaggcgc actgtatgag caagatttcc gatttggcga agaccttcga
      961 gcagacatca cgcaccgaag ccgccagcat agagcaacaa acgaaagcag acttagagac
     1021 gttacggaaa aatatcaacg aggcattgaa gcaaagcgag cagaaaataa ccgccgatat
     1081 aaacgcccgg cagttacgca tgagcaaggc agtattcaag ccctatctgt ggagcttgct
     1141 aggtatatcg gcggcagggt tgatagtcat agcagggctg ttcatagcga tatggagcgt
     1201 caagaacgag ctggacgact tgaaacagca gagagccgaa gcagagcgca ccctagacct
     1261 gttggaaacc aagaccaaag gtttgacact ggaaaattgc ccagtcgaga acagcaaagc
     1321 aacgcgggta tgcgtagcga ccgagaagcg aatgctggac gcgttagcgg aattagagag
     1381 caatcacgca gcaatcgagc agcgaatgat gaaagcctta acgcacttgg gcgaaaggtt
     1441 ggcagagcta gagcaggaaa acacgagttt agcgcagcag ctagcgagct tggcagccga
     1501 gttagagcgg cagagcgaaa tacggcaacg gcagagcgaa atcttgaatc aaccagccaa
     1561 acgataagcc aacgatacaa acgaacccaa agcaggggat ggggaatgag ccgatgatta
     1621 ccgagaacga acgcgacagg cgaacagccg catggctgat agagacctac ggggcagaag
     1681 ccgtagcgga agcagaaacc cgcattgcgg gcgcgagaaa gccctatccg agcaatatcg
     1741 ccaaagtatt gggggctagc ctacccgaag ccctaaaacg cacagaaaac gccgcagcgc
     1801 gccaaaaact ggcagggctg cagcggatgt tggacggtaa ggcagttaag acttcacaag
     1861 acttgtgaaa tcagaccact gctcaatgcg gaacgcccga atatcgcgga cagaagacgg
     1921 aaaccaaggc agagctttta gctcgttgat ggctgaaaac aggttagcca tatcttcgtt
     1981 ttggcaggtg tacaaacttc cctgaatgcg ggtaaagccg aatttccgca gggtgtatcc
     2041 aatatccgcg taggcttggg aaatgccttt cggatggttt tgagcggtat cggcaaccac
     2101 caaatcaaaa gaaatcgcgt acattaggca gcctttgggt cttgaacgat gtgggacagt
     2161 ttgtattgcg tgtgttcgcc gctttccggc agttcaatat ttacgagcca atcgccgtcc
     2221 ggaagctgtt cggcaggcgt gccgacgatg tacatcacgc cgtaatcgcc aaaggtgcgg
     2281 attgaaccgg tggggatagt ggtttgcatg gttagttctc ctgttgggtt tggttttcag
     2341 gctggtttgt catgtacaaa acccgttggg cagctttttc ggctgttgtg cgtttgatgc
     2401 cgtcaggcag aaaaattctc cattttttgg ctagaactat atctgcaaga tcatcaaccg
     2461 ttgcgctttt caaagcagga tttgcgttaa tttccgaata cagaaaatct ttgaatgccg
     2521 agtacagagc atcgcggttt attgcgtatc ttgtcatgct gtttcgcttt ggttgtcagt
     2581 ttcagacggc ataggcttgc cgcgcctgta ccaagtggcg cgggaaatgc cgaagtgttc
     2641 ccacggttta tcgcggctga tagagttttc ggctaggtag tcggcgcggg attgcgacca
     2701 tgcccgaaaa acggttcttg tggaacagcc gaagcgtttt gccagttctt tagccgtaac
     2761 gtctcgcttg gtggttttca gttttggata ggccatattt caaagctccg tgatgatttt
     2821 tgttctgcct gcattgatgg ttgttttccg caaactattc cgatgagcct gcaattccga
     2881 aaaccgtcga ttgctggctg caatatcaaa cttgtaccaa acccagttag cgattgattt
     2941 ggagatacat ttcacttctt tttcccacat cgggacaggg aaatccccat ttacccgcat
     3001 acactggtaa tgcacttctt tcagccagcc ttgcaccgtg tagccctgct gtttgaacgc
     3061 caacacgttt ttgtgcgccc aacggctcac aaggttaaac accgtgcaat ttctgcttaa
     3121 tccgaccgct tccacgttag agcgaccgat atagggctta aacttgtcta aatccacgaa
     3181 atccgcaaga tactccaaat cgtagcccct gattgcgtca ggaacgccgc gcagcgtcag
     3241 ccaatgcgga tgttcgggat ttttcgtaat cagcgataca aagcccacat caccgcgcaa
     3301 tttcgcctta tatgctgctt caagtgcagc aagatagcgc agggcttttt gtctcccacc
     3361 gtattccgcc gtcagcacag gcgcggaaag cgcataggca aggtgtgcgc cgccgttttc
     3421 cctgttgatt gccgcccaag caggcatagg cagattattg tcttcccaag ccaaccccgc
     3481 cccttcgtaa tccaagtcaa agagcataaa cacacgcaga tgcggcggat tgacttggat
     3541 gtagcggcgt ttgatggcgg cagcgtaaga gcgcaccagc ataggcgctt ctttgaaatc
     3601 tttgcagtat ggcttgtgtg ggatacgttc ttgcaagaag aggtcgggtt gggtgtataa
     3661 ttggctcatg ttgtatctcg aaacccccgt gcagattggc gtttggcggg ggttttgctt
     3721 tgtctaagat ttgcagattg tatgcttgtt tttaagatga tacaactatg tcaaaataac
     3781 cataatcaga taacagcccg ataggggttc ttatttcaaa attttccaat ccgcaattta
     3841 gcgaagccag caggcgaagc ggtaaagctt ggagcgcagc agcgcgacct aagccggcca
     3901 gcagggcggc gttttggggg aaacatgaaa ccagttccga cagggcggcg tgcgtgttct
     3961 tcccggagtt cttcatggag tatcggcgaa atgccgtgat gaaatgccgt ttttttgagc
     4021 agaaagcagt caaaaacagg ggtattttgc ccttttgaca ggttcgagtg ccgccgaaaa
     4081 gcgaacaaag caactcatca tccgagtcag cccgaccgag tttgagactt tgacccgaca
     4141 gaagacccat ccgaatttag cccgctacat tcgggagcgg gttttggaag atggcaaagc
     4201 atccgac
//
LOCUS       DAXFZM010000119         4095 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.120, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000119 DAXFZM010000000
VERSION     DAXFZM010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4095)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4095)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4095
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.120"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..268
                     /locus_tag="ACFJAG_001980"
     CDS             <1..268
                     /locus_tag="ACFJAG_001980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="toxin C-terminal domain-containing protein"
                     /protein_id="HFC3981192.1"
                     /translation="CPPRKTPSTPVYGNDSEAYAAAKKLGYRKIKERTRNDAAIFKKG
                     KSYISRDVDSHNGGAWKEASSPKNLNRKETRNGTFDKNLNRIGD"
     gene            274..672
                     /locus_tag="ACFJAG_001981"
     CDS             274..672
                     /locus_tag="ACFJAG_001981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 41 family protein"
                     /protein_id="HFC3981193.1"
                     /translation="MCEFKDFRRNIPCFEEYDENSFIGKWYDDGVWDDEEYWKLENAL
                     IEVRKKYPYPMDIPRDIVIGIGTIIDFLMVQNWKLFEIKASPWLPKSVKINERYERFR
                     VMLRYIFTDLDAEDWKFFYFPIQHSKGRLR"
     gene            703..1080
                     /locus_tag="ACFJAG_001982"
     CDS             703..1080
                     /locus_tag="ACFJAG_001982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 41 family protein"
                     /protein_id="HFC3981194.1"
                     /translation="MCEFKDIIRNVPYFEGYDENSFIGKWYDDGVWDDEEYWKLENDL
                     IEVRRKYPYPMDIPRDIVIGIGTIIEFLMVPNWKLFEIKASPWLPKSVKINERYERLK
                     TMLRYIFTEKDIVNVQFDYYNKK"
     gene            1211..1948
                     /locus_tag="ACFJAG_001983"
     CDS             1211..1948
                     /locus_tag="ACFJAG_001983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin-type HINT domain-containing
                     protein"
                     /protein_id="HFC3981195.1"
                     /translation="MVRTADGYKAIAHIQAGDRVLSKDEASGKTGYKPVTARYGNPYQ
                     ETVYIKVSDGIGNSQTLISNRIHPFYSDGKWIKAEDLKAGSRLYSESGRTQTVRNTIV
                     KPTPLKAYNLTVADWHTYFVKGNQAETEGVWVHNDCPYGGSNNLEKAKLRAERLSKND
                     RAGKDFTKAGKEAVIDLNRIQNNGQVKCANCGIETIPAKQSIKNISPTSNERQVDHVI
                     PKSKGGQGTPKNGQVLCRGCNIKKSNK"
     gene            1945..2364
                     /locus_tag="ACFJAG_001984"
     CDS             1945..2364
                     /locus_tag="ACFJAG_001984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4265 domain-containing protein"
                     /protein_id="HFC3981196.1"
                     /translation="MKSKLTVVYYDLESNIAEEILSGNIMPDGNFLIQEIPLFAPNLA
                     LNDIVAIEREDKMLFFDHLIKASGNTTINIVVLDHFPKDLLAAIEEHSGKIRKNGENY
                     LSVNFPPKKYNSDLKGILNRYEEANILSYREACLGFS"
     gene            2612..2884
                     /locus_tag="ACFJAG_001985"
     CDS             2612..2884
                     /locus_tag="ACFJAG_001985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981197.1"
                     /translation="MMSVKELFKVILDENKDFPIRTIHRTPMGILPKPVALSIVQYEN
                     DPGFYLFYLDETGQEQTDTYHDTLDSAFEQAEFEFGISKEEWMQSP"
     gene            3005..3550
                     /locus_tag="ACFJAG_001986"
     CDS             3005..3550
                     /locus_tag="ACFJAG_001986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004463655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="suppressor of fused domain protein"
                     /protein_id="HFC3981198.1"
                     /translation="MIIVEHLEHYLGEIESGIKCLDRRYHLSVSVFPSQPYKGVTTFS
                     TLGLNRYDLNYKSRFELIFTCSEEWNKENIAAFLSGVAEYLIDNRQPILRGEIIQLPR
                     VIIEGSKMDALYVSAPFYFDDDFQVCYGEHYNIVFPLLVPLYKQEAELVEKKGWNAFE
                     QFLLNNEVDNLSDMKRKPFAW"
BASE COUNT         1388 a          712 c          862 g         1133 t
ORIGIN      
        1 gtgtccgcca agaaaaacac catctacccc cgtatatggg aatgattcag aagcatatgc
       61 agcagcaaag aaattgggat atagaaaaat aaaagaaaga acgagaaatg atgctgctat
      121 ttttaaaaaa ggaaagagtt atatatcacg cgatgtagat tcacataatg gaggggcttg
      181 gaaagaagca tcttcaccca aaaatctgaa cagaaaagaa acaagaaacg gtacatttga
      241 taaaaaccta aatcgtattg gagattaatt attatgtgcg agttcaagga ttttagaaga
      301 aacatccctt gttttgaaga gtatgacgaa aattcattta ttggcaaatg gtatgatgac
      361 ggagtgtggg atgatgaaga atattggaaa ttggagaatg ctttaatcga ggttagaaaa
      421 aaatatcctt atccgatgga tataccaagg gacatcgtga ttggaatcgg taccattatt
      481 gattttttaa tggttcaaaa ttggaaactt tttgaaatta aagcttctcc ttggttgcct
      541 aaaagtgtca aaattaatga gcgttatgaa aggttcagag taatgctccg ttatattttt
      601 actgatctag atgcagagga ctggaaattt ttttactttc caatacaaca tagtaaaggt
      661 agattgagat gaaaagttta attatattgg agatacatta ttatgtgtga gttcaaggat
      721 attataagaa acgttcctta ttttgagggg tatgacgaaa attcatttat tggcaaatgg
      781 tatgatgacg gggtgtggga tgatgaagaa tattggaagt tggagaatga tttaatcgag
      841 gttaggagaa aatatcctta tccgatggat ataccaaggg atatcgtgat tggaatcggt
      901 accattattg agtttttaat ggttccaaat tggaaacttt ttgaaattaa agcttctcct
      961 tggttgccta aaagtgtcaa aattaacgaa cgttatgaaa ggcttaaaac aatgctccgt
     1021 tatattttta ccgagaaaga catagtcaac gtgcaatttg attattacaa caaaaaatag
     1081 caaaacccgg caatcaaaat gccgtctgaa accgtgttta attttcaggc gaccttcccc
     1141 ttattttaaa caggatattg ggaactaagt tcttcaaaaa tcctacacct gctctttcca
     1201 cggcagcacc ttggtcagaa cggcagacgg ctacaaagcc atcgcccata ttcaagccgg
     1261 agaccgcgtc ctttccaagg acgaggcaag cgggaaaaca ggatacaaac ccgttaccgc
     1321 ccgatacggc aatccgtatc aagaaaccgt ttacattaaa gtttcagacg gcatcggcaa
     1381 cagccaaacc ctgatttcca accgcatcca cccgttttat tcggacggca aatggattaa
     1441 agcggaagat ttgaaagcgg gaagcaggct gtattccgaa agcggcagaa cccaaaccgt
     1501 ccgcaacacc attgtcaaac caacaccgct caaagcctac aatctgaccg ttgccgactg
     1561 gcatacctac ttcgtcaagg gtaatcaggc ggaaacggaa ggggtttggg ttcataatga
     1621 ttgtccgtat ggcggttcaa ataatttaga gaaagcaaaa cttcgcgcag aacggcttag
     1681 taaaaacgat cgggcaggaa aagactttac taaagcagga aaagaagccg ttattgattt
     1741 gaataggatt caaaataatg gtcaagttaa gtgcgctaat tgcggtattg aaacaattcc
     1801 agccaaacaa tctataaaaa atatttctcc tacttcaaat gaaagacaag tagatcatgt
     1861 catccctaaa tctaagggtg gtcaaggtac acctaaaaac gggcaggtat tatgcagagg
     1921 ctgcaacatt aagaagagta acaaatgaaa tcgaaactta ctgtcgtcta ttacgatttg
     1981 gaaagcaata ttgcagaaga aatactgtca ggaaacataa tgcctgatgg aaattttctt
     2041 attcaagaga ttcctctttt cgcaccgaat ttggctttaa acgacattgt tgccatagaa
     2101 cgtgaggata agatgctgtt tttcgaccac ttgataaaag cttcaggaaa taccacgata
     2161 aacatcgttg ttttggatca tttcccaaag gatttattgg cagccataga agaacacagt
     2221 ggtaaaatca gaaaaaatgg agagaattat ttatcggtta attttccgcc caaaaaatat
     2281 aattctgatt taaaaggaat tttaaataga tatgaggaag caaatatcct cagctacagg
     2341 gaagcttgtt tgggcttctc ttaatcgatc tataagtaag aatggattac gttagattgt
     2401 aaacctaacg attaaaaggt cgtctgaaac cgtgtttaat tttcagacga cctatttcct
     2461 tcatttgaaa caggatattg aaaactaagt tcttcaaaaa tcctacacct gctccttcca
     2521 cggcagcacc ttggtcaaaa cggcagacgg ctacaaagcc aatggacgtg taatagaaaa
     2581 tagtgcggta acaattattc gggattgaag aatgatgagt gtaaaagaat tattcaaagt
     2641 catcttagat gaaaataaag attttcctat tagaacgatt catcgtaccc cgatggggat
     2701 acttcccaaa cctgttgctt taagtattgt tcaatatgaa aatgacccgg gattttattt
     2761 gttttatttg gatgagaccg gtcaggaaca aacggatact tatcatgaca cattagattc
     2821 ggcatttgaa caggctgaat ttgaatttgg aatcagcaaa gaggaatgga tgcaaagtcc
     2881 ttagacggca aaatcaagat gccgctttat ttttcagacg gcatttccgt caataaaaaa
     2941 gtcggtattg gagcccaaaa cagcctacgt cttgccggga tagggatgaa atctttaaga
     3001 aaaaatgatt atagttgaac atttagaaca ttatttgggt gaaatcgaaa gcggtataaa
     3061 atgcttggat cgacgttatc atctcagcgt ttccgtcttc ccatcacaac catataaagg
     3121 ggtaactact ttttctactt taggcttgaa tcgatatgac ttgaactata agagtaggtt
     3181 tgaattaatt tttacctgtt ctgaagaatg gaataaagaa aatattgcag cttttctatc
     3241 aggagtagcc gaatatttga ttgacaatag acaacctatt ttaagaggtg aaattattca
     3301 attacccagg gtaattatcg aaggtagcaa aatggatgca ctgtatgttt ccgccccatt
     3361 ttatttcgat gatgattttc aggtctgtta tggcgaacac tacaatatcg ttttcccttt
     3421 gcttgtcccc ttgtataaac aggaagcaga attggtggaa aagaaaggtt ggaatgcttt
     3481 tgagcagttc ttgctgaata atgaagttga caacctttcg gatatgaagc ggaaaccgtt
     3541 tgcttggtaa gggctttctt aaatttgatt aaaggtcgtc tgaaattaag cttgtttttc
     3601 agatggtctt tccttcattt gaagcaggat attgagaact gagttcttca aaaatcctac
     3661 acctgctcct tccacggcag caccttggtc aaaacggcag acggctgaaa agcaaacacc
     3721 gtccgtcgtg ttgccgtttg cggatgagta cgggtcaacc ccaatgccgc cgaaaccgtc
     3781 gaagccgcct tcaacattgc caccgccaaa gccgcgaagt tggcaaaaac ggtaaaaccg
     3841 gggagataaa agccgatggc aggaaagtaa atgtgaggat agacagtacg gaggcagacc
     3901 tgctttatcc ggcagggcaa taagaaaaca aaacttagat atggaaaacg attgtgaaga
     3961 ttaaaccatt acaattttct aacaataatc acagatttta tgtggacaaa atttgtgtta
     4021 ccgaacaaga tgtgaacatt ttggcatccg accgaaatta tgaattaaat attgaaatat
     4081 ttattgacaa tataa
//
LOCUS       DAXFZM010000120         4050 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.121, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000120 DAXFZM010000000
VERSION     DAXFZM010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4050)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4050)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4050
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.121"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            78..212
                     /locus_tag="ACFJAG_001987"
     CDS             78..212
                     /locus_tag="ACFJAG_001987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981199.1"
                     /translation="MPSERIFRSVLRLVGVSSDTVKRKFAGAGLSYAGKAAGESLYCL
                     "
     gene            329..1123
                     /locus_tag="ACFJAG_001988"
     CDS             329..1123
                     /locus_tag="ACFJAG_001988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HFC3981200.1"
                     /translation="MNTILAFDIETVPDVQGIRTLYDLPSSLPDDEVVLFAQQKRRAQ
                     TGGDFMQHHLHQVVAVSCCMRWGQDKVHVGTIGEMDDGEEVVIAKFFELVEKHTPQLV
                     SWNGGGFDLPVLHYRSLIYGINAARYWDTGDGDFGDSRDFKWNNYISRYHQRHCDLMD
                     LLALYQPRANVPLDDMAKLCGFPGKLGMDGSKVWEAFHAGRLKEIRNYCETDAVNTYL
                     MYLRFCLVSGRFDADEYEMEIKRIRNYLSAQTEDKPHWAEFVQAWK"
     gene            1348..3951
                     /gene="pepN"
                     /locus_tag="ACFJAG_001989"
     CDS             1348..3951
                     /gene="pepN"
                     /locus_tag="ACFJAG_001989"
                     /EC_number="3.4.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase N"
                     /protein_id="HFC3981201.1"
                     /translation="MSKTVRYLKDYQTPAYRILETELHFDIAEPQTVVKSRLTVEPQR
                     AGEPLVLDGSAKLLSVKINGAAADYVLEGETLTIADVPSERFTVEVETEILPAENKSL
                     MGLYASGGNLFTQCEPEGFRKITFYIDRPDVMSKFTTTIVADKKRYPVLLSNGNKIDG
                     GEFSDGRHWVKWEDPFAKPSYLFALVAGDLAVTEDRFTTMSGRNVKIEFYTTEADKPK
                     VGFAVESLKNAMKWDETRFGLEYDLDIFMVVAVGDFNMGAMENKGLNIFNTKFVLADS
                     RTATDTDFEGIESVVGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSGDRAGRA
                     VRRIENIRLLRQNQFPEDAGPTAHPVRPVSYEEMNNFYTMTVYEKGAEVVRMYHTLLG
                     EEGFQKGMKLYFQRHDGQAVTCDDFRAAMADANGINLDRFALWYSQAGTPVLEAEGRL
                     KNNVFELTIKQTVPPTPDMADKQPMMIPVKVGLLNRNGEAVAFDYQGKRATEAVLLMT
                     EAEQAFPLEGVTEAVVPSLLRGFSAPVYLNYPYSDDDLLLLLAHDSDAFTRWEAAQTL
                     YRRAVAANLAALSDGIGLPKHEKLLAAVEKVISDDLLDNAFKALLLGVPSEAELWDGT
                     ENIDPLRYHQAREALLDTLAVRFLPKWHELDRQAAKQENQSYEYSPETADWRTLRNVC
                     RAFVLRADPAHIETVAEKYGEMAQNMTHEWGILSAVNGNESDTRNCLLAQFADKFSDD
                     ALVMDKYFALIGSSRRSDTLQQVQTALQHPKFNLENPNKARSLIGSFSRNVPHFHAQD
                     GSGYRFIADKVIEIDRFNPQVAARLVQAFNLCNKLEPHRKNLVKQELQCIRAQEGLSK
                     DVGEIVGKILG"
BASE COUNT          979 a         1112 c         1118 g          841 t
ORIGIN      
        1 ctgttttaaa aaatatttgg caaggtgtga aaaaaggcgt acattccgct acacagaatt
       61 acagatacag cggagcaatg ccgtctgaaa ggattttccg gtcagtcttg cggttggtcg
      121 gggtttcatc ggatacggtg aaacgaaagt ttgccggcgc agggttgagc tacgcgggta
      181 aagccgcagg cgaaagcctg tattgtttgt gaagcgtaaa tctctgattt gaggtattgg
      241 ggcaatcctg tggggggttg cctctttttt tatccgcctt ttaatgacac aataggcgca
      301 agtctgtttt tgaatgcaag gtactgccat gaatacgatt ttggctttcg atattgaaac
      361 cgtacccgat gtgcagggta tccgtacgtt gtatgacttg ccgtcttccc tgccggatga
      421 cgaagtggtg ctgttcgcgc agcagaaacg ccgcgcacag accggcggcg attttatgca
      481 gcaccacctc catcaggttg tggcggtttc ctgctgtatg cgctgggggc aggacaaggt
      541 tcatgtcggc accatcggcg agatggacga tggcgaggaa gtggttatcg ccaaattttt
      601 cgagttggtg gaaaaacata cgccgcaact ggtcagttgg aacgggggcg ggttcgattt
      661 gcccgtactg cattaccgct ccctgatata cggcatcaac gccgcgcgct attgggatac
      721 gggcgacggc gatttcggcg acagccgcga tttcaagtgg aacaactaca tcagccgtta
      781 tcaccaacgc cactgcgatt tgatggattt gctcgcgctt taccagccga gggcgaatgt
      841 gccgctggac gatatggcga aactgtgcgg ctttccgggc aagctgggta tggacggcag
      901 caaggtgtgg gaggcgttcc acgcgggcag gctgaaggaa atccgcaatt attgcgaaac
      961 cgatgccgtg aatacgtatt tgatgtatct gcgtttctgt ctggtcagcg gcagattcga
     1021 cgcggacgaa tacgaaatgg aaatcaagcg gatcagaaac tatctctccg cccaaacaga
     1081 agacaaaccg cattgggcag aatttgtcca agcgtggaaa tagaaacctg ctgtccgaag
     1141 gcggtacgct tgtgccgccg tttcggtttc agacggcgta tggtggatta aattcaaacc
     1201 ggtacagcct tgcctctcct tgccttacta tctgtactgt ctgcggcttc gtcgccttgt
     1261 cctgattttt gttaatccgc tttaaaagct gtatccgtgc cgtctgaagc cttttccagt
     1321 caaaccaaac aatattgaaa gaaaaaaatg agcaaaaccg tccgttatct gaaagattac
     1381 caaacgcctg cctaccgcat tcttgaaacc gaactgcatt tcgacattgc cgaaccgcaa
     1441 accgtcgtga agtcgcgttt gacggtcgag ccgcagaggg cgggcgagcc gctggtgttg
     1501 gacggttcgg caaaactttt gtccgtcaaa atcaacggcg cggcggcgga ttatgtgttg
     1561 gaaggcgaga cgctgacgat tgcagacgta ccgtccgaac gcttcaccgt cgaagtggaa
     1621 accgaaatcc tgccggcgga aaacaaatcg ctgatggggc tgtatgcttc cggcggcaat
     1681 ctgtttaccc agtgcgagcc ggagggcttc cgcaaaatca cgttctacat cgaccgtccg
     1741 gatgtgatgt ccaagttcac gaccaccatc gtcgcggaca aaaaacgcta tcccgttttg
     1801 ctttccaacg gcaacaaaat cgacggcggc gagttttcag acggccgcca ttgggtgaaa
     1861 tgggaagacc cgtttgccaa accgagttat ctgtttgctt tggtcgcggg cgatttggcg
     1921 gtaacggaag accgtttcac caccatgagc ggcagaaacg tcaaaatcga gttttacacc
     1981 accgaagcgg acaaacccaa ggtcggcttt gccgtggaat cgttgaaaaa cgcgatgaag
     2041 tgggacgaaa cgcgcttcgg gttggaatat gacttggata ttttcatggt cgtcgccgta
     2101 ggcgatttca atatgggcgc gatggaaaac aagggtttga acatttttaa caccaagttc
     2161 gtcctcgccg acagccgcac cgccaccgat accgatttcg aaggcattga atccgtggtc
     2221 ggacacgaat atttccacaa ctggacgggc aaccgcgtaa cctgccgcga ctggttccag
     2281 ctttcgctga aggaagggct gaccgtgttc cgcgaccaag agttttccgg cgaccgcgcc
     2341 ggccgcgccg tgcgccgcat cgagaacatc cgcctgctgc gccagaacca gttccccgaa
     2401 gacgcaggcc cgaccgccca tccggtgcgc cccgtcagct atgaggagat gaacaatttc
     2461 tacaccatga ccgtttatga aaaaggcgcg gaagtggtgc ggatgtatca taccctgctc
     2521 ggcgaagagg gcttccaaaa aggcatgaag ctatatttcc aacgccacga cggacaggca
     2581 gtgacctgcg acgatttccg cgcggcgatg gcggatgcga acggcatcaa tctcgaccgg
     2641 ttcgccttgt ggtacagcca ggcgggcacg cccgttttgg aagccgaagg ccgtctgaaa
     2701 aacaatgttt tcgagttaac cattaaacaa accgtgccgc ccacgcccga tatggcggac
     2761 aaacagccga tgatgattcc cgtcaaagtc gggcttctga accgcaacgg cgaagcggtg
     2821 gcattcgatt atcagggcaa acgcgcaacc gaagccgtgt tgctgatgac cgaagccgaa
     2881 caggccttcc cgctcgaagg tgtaaccgaa gccgtcgttc cctcgctgct gcgcgggttc
     2941 agcgcgccgg tgtatctgaa ctatccgtac agcgacgacg acctgctgct cctgctcgcc
     3001 cacgacagcg acgccttcac gcgctgggaa gccgcccaaa cgctctaccg tcgcgccgtc
     3061 gccgccaacc ttgccgcgct ttcagacggc atcgggttgc cgaaacacga aaaactgctt
     3121 gccgccgtcg aaaaagtcat ttcagacgac ctcttggaca acgccttcaa agccctgctt
     3181 ttgggcgtgc cgtccgaagc cgaactgtgg gacggcacgg aaaacatcga cccgctgcgc
     3241 taccatcagg cgcgcgaagc cttgttggat acgcttgccg tccgcttcct gccgaaatgg
     3301 cacgaattgg accgtcaggc ggcgaagcag gaaaaccaaa gttacgaata cagccccgaa
     3361 accgccgact ggcgcacgct gcgcaacgtc tgccgcgcct tcgtcctgcg cgccgacccc
     3421 gcgcacatcg aaactgttgc cgaaaaatac ggcgaaatgg cgcaaaacat gacccacgaa
     3481 tggggcatcc tgtccgccgt caacggcaac gaaagcgata cgcgcaactg cctgctggcg
     3541 cagtttgccg acaagttttc agacgacgcg ctggtgatgg acaaatattt cgcccttatc
     3601 ggctcaagcc gccgcagcga caccctgcaa caggttcaaa ccgccttgca gcatccgaaa
     3661 ttcaatctcg aaaaccccaa caaagcccgt tcgctcatcg gcagcttcag ccgcaacgtc
     3721 ccgcattttc acgcacaaga cggcagcggc taccgcttca tcgccgacaa agtcatcgaa
     3781 atcgaccgct tcaacccgca ggtcgccgcc cgcctggtgc aggcgttcaa cctctgcaac
     3841 aagctcgagc cgcaccgcaa aaacttggtg aaacaagaat tgcagtgcat tcgggcgcag
     3901 gaaggattgt cgaaagacgt gggcgaaatc gtcggcaaga ttttgggttg aggcagtcaa
     3961 acagaaaaaa caagggtctg taccagatta gcagatatgt tgccctcgaa atatgaagat
     4021 aacacactgc aaattaaaga aagaagtaca
//
LOCUS       DAXFZM010000121         4033 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.122, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000121 DAXFZM010000000
VERSION     DAXFZM010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4033)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4033)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4033
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.122"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..173
                     /locus_tag="ACFJAG_001990"
     CDS             <1..173
                     /locus_tag="ACFJAG_001990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003762769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="type I-C CRISPR-associated protein Cas5"
                     /protein_id="HFC3981202.1"
                     /translation="EPLPPSALSESEANRDLGWMLHDIDFDHGNTPHFFRTQMKDGLI
                     DVPPFYAEEVKA"
     gene            170..1456
                     /gene="cas8c"
                     /locus_tag="ACFJAG_001991"
                     /pseudo
     CDS             170..1456
                     /gene="cas8c"
                     /locus_tag="ACFJAG_001991"
                     /inference="COORDINATES: protein motif:HMM:NF021243.4"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0043571 - maintenance of CRISPR repeat
                     elements [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type I-C CRISPR-associated protein Cas8c/Csd1"
     gene            1476..2236
                     /gene="cas7c"
                     /locus_tag="ACFJAG_001992"
                     /pseudo
     CDS             1476..2236
                     /gene="cas7c"
                     /locus_tag="ACFJAG_001992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003777774.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_process: GO:0043571 - maintenance of CRISPR repeat
                     elements [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type I-C CRISPR-associated protein Cas7/Csd2"
     gene            2263..2631
                     /locus_tag="ACFJAG_001993"
     CDS             2263..2631
                     /locus_tag="ACFJAG_001993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981203.1"
                     /translation="MKYWLVGASWGGQGHQDQFFVENGYWVLEWESSQQPDQFAKGEK
                     IQVGDRIAIKRMKGQGSSEIKILHIGIVKGVISETNKIICVVDWIVKNLDRNVESRGC
                     FKSIHDPYDKDEWIEKIFCL"
     gene            2638..3288
                     /gene="cas4"
                     /locus_tag="ACFJAG_001994"
     CDS             2638..3288
                     /gene="cas4"
                     /locus_tag="ACFJAG_001994"
                     /EC_number="3.1.12.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0043571 - maintenance of CRISPR repeat
                     elements [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated protein Cas4"
                     /protein_id="HFC3981204.1"
                     /translation="MTALLTETQRENQDTRLIPLSALQHYAFCPRQCALIHNAQAWAE
                     NCLTAQGKALHERVDSGEPETHKGVRFERTVHVSAEKPGISGILDLVEADTKTGRLKP
                     VEYKRGKPKPDPGDEIQLCAQGLCLEEMTGQTVSEGALWYMQTRHRVPVVFSDGLRAQ
                     TLATIAAVCKLLNSGQTPPPDYGKRCKACSLAEICQPELLGKRDRSVGYVKGLFGE"
     gene            3404..3763
                     /locus_tag="ACFJAG_001995"
     CDS             3404..3763
                     /locus_tag="ACFJAG_001995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981205.1"
                     /translation="MTRNIEHQFSNLSDVGEKLELENPTVENVVDILVDIGHDDRVYT
                     FHDDFLGLKSGLPQDLLSKHIDELEEGDFADRYSDEIDKILDNANIIFYHLERELSEN
                     DLEEIREERERLGLEDD"
BASE COUNT         1188 a          899 c          990 g          956 t
ORIGIN      
        1 gtgaaccgct gccgccgtcg gcgttatcgg aaagcgaggc aaaccgcgat ttgggctgga
       61 tgctgcacga tattgatttt gatcacggca acacgccgca ttttttccgc acgcaaatga
      121 aagacggctt gattgatgtg ccgccgtttt acgccgagga ggtgaaagca tgattcttgc
      181 gtcccttgtc cgctattacc gccgtttggc aacggaaacc gatgaaacgg gcaacccgaa
      241 agtgccgtct tatggtttta gcgaggagaa aatcggctgg attttggtgt tggataaaga
      301 aggtcgtctg aaaaccgttg tgccgaatct gactgccgat aaaaagccgc agccgaagct
      361 gatgagtgtg ccgcgccctg aaaaacgcac gtcgggtatc aaaccgaatt ttttgtggga
      421 taaaaccgcc tacgcgcttg gcgtggaagc caataaaaac aaagccgaag ccaaagaaaa
      481 accgtttacg ccgtctgaaa aaacctttga agccttcaag caataccatc tcgatttact
      541 gcaaaacagc gaagacgaag gtttacaagc cttatgccgt tttctgcaaa actggcagcc
      601 tgcacatttc gctgccgaaa acctgcctgc cgaaatgctt gattccaaca ccgcattttc
      661 tcttgaaaaa ccgaccgctc ttatccataa acgcgaagcc gcgcaaacct tgtgggcagg
      721 ctgcctgaaa agtgatgaag cactcgaaag cttatgcctg attagcggcg acaccgcgcc
      781 gattgcacgg ctgcatccgg cgattaaagg cgtgtttggc gggcaaagct ccggcggttc
      841 gattatttcg tttaataaag aagccttttc ctctttcgga aaagagcaag gcgcaaatgc
      901 gcctgtttcc gaacaatccg cctttgccta caccaccgcg ctgaactatc tcttgcgccg
      961 cgaaaataat cactgcctga ccataggcga tgccagcacg gtcttttggg cggaagcgga
     1021 tgatatagtg gattaaattt aaatcaggac aaggcggcga aaccgcagac agtacaaata
     1081 gtacggcaag gcgaggcaac gccgtactgg tttaaattta atccactata acgccacggc
     1141 gcaggctgcc gaaggcttct tcgcgcaagt gtttacgccg tcggatgacg aacaagaaag
     1201 cgccaaaatt ttcaacgtat tggaacaaat cggcaaaggt cgtccgctgc aagaaattgc
     1261 gcctgaactc tctcccaata cccgttttta catcttgggg cttgccccca atgctgcgcg
     1321 gatttctgtt cggttttggc tggacaccac atttgggcag ctggcggaaa acttggcgca
     1381 tcattggcaa gatttagccc ttgagccttg tgcgtggaaa acgccgccgt ctatttggcg
     1441 gctcttgttg caaactgccg tgctgggcaa aagcgaaaac atccaaaggc ttggtaaccg
     1501 atgtctgcct gaaacgcaaa atccgtaatt ttgtcgaaat cagcagcgaa aacgaagccg
     1561 gttacgaaat ctacgtcaaa gaaaaaagcg tgctgaacct gcaaaacaaa cgcgcttatg
     1621 aagcactcgg cattgagtct gaagccaaaa actgccgaag gacgaagcca aagcccgtga
     1681 cattaccgcg tggatgtgta aaaacttctt cgatatccga accttcggcg ctgtgatgac
     1741 caccgaagtc aacagcggac aagtgcgcgg cccggtacaa ctggcgtttg cccaatccat
     1801 cgacccgatt gtgccgccgg aagtttccat cacacgcatg gcggtaacca acgaaaaaga
     1861 cttggaaaaa gaacgcacca tggggcgcaa atacatcgtc ccttacgtgg tctaccgcgt
     1921 gcatggcttt atctccgcca accttgccgc caaaaccggt ttttcagacg acgacttagc
     1981 caaactctgg caagccctga cgttgatgtt tgaacacgac cgctcagccg cccgtggcga
     2041 aatggcggca cgcaaactgg ttgttttcaa acacgacagc gcactcggca gccagcctgc
     2101 acataaactg tttgacaccg taaaagtcga acgcgtaaac ggcgaatcag gtacgcccgc
     2161 aagcggtttt ggcgattaca aaatcagcgt ggtttcagac gggctaaatg gcgtgagtgt
     2221 ggaagagtat ttgtaagttt tcaataaatc aggagtaacg atatgaaata ttggctagtt
     2281 ggagcctctt ggggagggca ggggcatcaa gatcaatttt ttgttgaaaa tggttactgg
     2341 gttttggagt gggaatcctc tcaacaacca gatcaatttg caaaaggaga aaaaatccaa
     2401 gtaggtgatc gaattgcaat caaacgcatg aaaggtcaag gatcgtctga aattaagatt
     2461 ttacatattg gaatcgttaa gggggttatt tctgaaacga acaaaattat ctgtgtcgtt
     2521 gattggatag ttaaaaattt agatagaaat gttgaaagta gaggatgctt taaaagtatt
     2581 catgatccat atgataaaga tgaatggata gaaaaaattt tttgtttgta gcaaaagatg
     2641 accgcacttt taaccgaaac ccaaagggaa aatcaggata cgcgcctgat tcccctttcc
     2701 gccctgcaac actacgcctt ctgcccgcgt caatgtgctt tgattcacaa cgcgcaggcg
     2761 tgggcggaga actgtttgac cgcgcagggc aaggcactgc atgagcgggt ggattcgggc
     2821 gagcccgaaa cgcacaaggg cgtgcgtttt gagcggacgg tacacgtttc ggcggaaaaa
     2881 ccgggcatca gcggcatatt ggatttggtg gaagcggata caaaaacagg ccgtctgaaa
     2941 cctgtggaat acaaacgagg caagcccaaa cctgacccgg gggatgaaat ccagctttgc
     3001 gcccaaggtt tgtgtttgga agaaatgacg gggcaaaccg tttcagaggg cgcgctgtgg
     3061 tatatgcaaa cccgccaccg cgtccccgtt gtgttttcag acggtctgcg cgcccaaacc
     3121 ctcgccacca tcgccgctgt gtgcaaactc ctaaacagcg gccaaacccc gccgcccgac
     3181 tacggcaaac gctgcaaagc ctgctcgctg gcggagattt gccagccgga gttgctggga
     3241 aaacgggata ggagtgtggg atatgtgaag gggttgtttg gggagtaata ttttatttga
     3301 aaaaaactat tacgttaatt aacttgaatc ttccaaatta atcgcaattt ctgaaaacga
     3361 gcaatcatgc tcaattgtaa ttacacattt taaggagtcg taaatgacaa gaaatataga
     3421 acatcaattt agcaatctat ctgatgttgg tgaaaaacta gagttagaaa atcctactgt
     3481 agagaatgtc gtagatattt tagtggatat tggacatgat gaccgagttt atacttttca
     3541 tgatgacttt ctcgggttaa aaagcggttt gccacaagac ttattgtcga aacatatcga
     3601 cgagcttgaa gaaggtgatt ttgcagatag atattcagat gaaattgata aaatactgga
     3661 taatgcaaat ataatattct atcaccttga acgagagctt agtgaaaatg atttagagga
     3721 aatacgagaa gaaagagaaa gactgggttt agaagacgat tagtatactt gttgtcatag
     3781 aatagattca atacatacag gttgggttat gctgttttac ccaaccagct aacctcaggg
     3841 catatttaat attatttaat tctgaataat attctattga agtttcaaga tatctaagga
     3901 aaacatgaca caaaaaaatg attttaaaaa tgctaatttt tatgggaata ctcaaatagt
     3961 taatggtgat gttcataatg tacatactca aaatacacca aattcaataa atgaaaacga
     4021 aatagccaca tac
//
LOCUS       DAXFZM010000122         3785 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.123, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000122 DAXFZM010000000
VERSION     DAXFZM010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3785)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3785)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3785
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.123"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            166..507
                     /locus_tag="ACFJAG_001996"
                     /pseudo
     CDS             166..507
                     /locus_tag="ACFJAG_001996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981065.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
     gene            547..906
                     /locus_tag="ACFJAG_001997"
                     /pseudo
     CDS             547..906
                     /locus_tag="ACFJAG_001997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981065.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
     gene            1361..2284
                     /gene="lpxC"
                     /locus_tag="ACFJAG_001998"
     CDS             1361..2284
                     /gene="lpxC"
                     /locus_tag="ACFJAG_001998"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008759 - UDP-3-O-[3-hydroxymyristoyl]
                     N-acetylglucosamine deacetylase activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HFC3981206.1"
                     /translation="MLQRTLAKSIGVTGVGLHSGERVALTLHPAPENSGISFRRTDLD
                     GEMGEQIKLNPYLINDTRLSSTIVTDKGLRVGTIEHIMSALSAYGIDNALIELNAPEI
                     PIMDGSSLPFIYLLQDAGVVDQKAQKRFLKILKPVEIKEAGKWVRFTPYDGFKVTLTI
                     EFDHPVFNRSPPTFEIDFAGKSYIGEIARARTFGFMHEVEMMRAHNLGLGGNLNNAIV
                     IGDTDVLNPEGLRYPDEFVRHKILDAIGDLYIVGHPIVGAFEGYKSGHAVNNALLRAV
                     LADETAYEWVEFADSDDLPDAFHELNIRNCG"
     gene            2413..2814
                     /locus_tag="ACFJAG_001999"
                     /pseudo
     CDS             2413..2814
                     /locus_tag="ACFJAG_001999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981065.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
     gene            2839..3201
                     /locus_tag="ACFJAG_002000"
     CDS             2839..3201
                     /locus_tag="ACFJAG_002000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009349130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HFC3981207.1"
                     /translation="MSNTFAVAGYCPNHGIWPENNDKAGVASPSDIKGKYVESVTVAK
                     GVVTAKMLSSGVNKEIQGKKLSLWAKRENGSVKWFCGQPVKRDDTAAKAGTDNGGKGK
                     IETKHLPSTCRDKASDAN"
BASE COUNT         1023 a         1087 c          917 g          758 t
ORIGIN      
        1 agcgcgccgc cgacaaagcc gacgacaccg ttgccgacgc cgccgacgcc aacggcaaaa
       61 tcgacaccaa gcacctgccg tcaacctgcc gcgataaaca tgatgccaaa tgaggcaaat
      121 taggccttaa atttcaaata aatcagccat caccgggtat taccctcagc cgtcaccgaa
      181 tattacccga atcacggcaa atggccggaa gacaacactt ctgccggcgt ggcatccgct
      241 tcagaaatca aaggcaaata tgttcagaaa gttgaagtca acaacggcgt cgttaccgcc
      301 acaatggctt caagcggcgt aaacaaagaa atcaaaggca aaaaactctc cctgtggggc
      361 aggcgtgaaa acggttcggt aaaatggttc tgcggacagc cggttaagcg cgaaagcaac
      421 aacgccgacg acgttaccga cgacaccaac ggcaccaaaa tcgacaccaa gcacctgccg
      481 tcaacctgcc gcgataaatc aactgccgtt tgcacgaaac accacgcgcc gatttcaaac
      541 acttccaaaa aatcagccgt tgccgggtat tacctgaatc acggcgaatg gccggaaaac
      601 aacacttctg ccggcgtggc aaaccccacc gaaatcaaag gcaaatatgt taaggaagtt
      661 gaagtcaaaa acggcgtcgt taccgcccaa atggcttcaa ccggcgtaaa caaagaaatc
      721 caaggcaaaa gactctccct gtgggccaag cgtcaagacg gttcggtaaa atggttctgc
      781 ggacagccgg ttacgcgcga caacgccaac gccgccgtcg acgccgacac cgccgacgac
      841 accaaaaaaa tcaacaccaa gcacctgccg tcaacctgcc gcgatacgtc atctgccggt
      901 acgtgatcca cggccacccg gatcaacccg ggcggcttgt cttttaaggg tttgcaaggc
      961 gggcggggtc gtccgttccg gtggaaataa tatatcgatt gcgcttcaag gccctgcatg
     1021 tgcctcattg ccacccgttt aaacacggtt tttatctgac aggcgcgcaa cccgccccct
     1081 catttgccga acaagcggtc cggactcccg cccgcgcggg aatgacggga tgtatagtga
     1141 attaaattta aaccagtacg gcgttgcctc gccttttcgt actatccgta ctgcctgcgg
     1201 cccgccgcct tgtcctgatt ttcgttaatc cgccatacat tttcatgcgg cttacgtgtt
     1261 ggaaacggat acattggcaa atactattga aaaacatagc ctgtttttcc ggttttatcg
     1321 tattattccg aaacttaccc cattgataag gaagcggttt atgctgcaaa gaactttggc
     1381 gaaatccatc ggcgttaccg gagtcgggct gcattcgggc gaacgcgtcg cgctgaccct
     1441 gcaccccgcg cctgaaaaca gcgggatttc cttccgccgc accgatttgg acggcgagat
     1501 gggcgaacaa atcaagctga acccttattt gatcaacgat acccgccttt catccaccat
     1561 cgttaccgac aaaggcctgc gcgtcggcac catcgaacac atcatgtccg cactgtccgc
     1621 ctacggcatc gacaatgcgc tgattgagtt gaacgcgccc gaaatcccga ttatggacgg
     1681 ctccagcctg ccgtttattt acctcctgca agatgcgggc gttgtagacc aaaaggcgca
     1741 aaagcgtttt ttgaaaatcc tcaaacccgt cgaaatcaaa gaagcgggca aatgggtccg
     1801 atttacgccg tatgacggtt tcaaggtaac gctgaccatc gaattcgacc atcctgtttt
     1861 caaccgcagc ccgcctacgt ttgaaattga tttcgccggc aaatcctaca tcggcgaaat
     1921 cgcgcgcgcg cgcactttcg gctttatgca cgaagtggaa atgatgcgcg cccacaatct
     1981 cggcttaggc ggcaatttga acaacgccat cgtgattggc gacacggatg tcctgaatcc
     2041 tgaaggcttg cgctatcccg atgagtttgt gcgccacaaa atcctcgacg ccatcggcga
     2101 tttgtatatc gtcggacatc cgattgtcgg cgcgtttgaa ggctacaaat cgggacacgc
     2161 cgtcaacaac gcccttttgc gcgcagtttt ggcagacgaa acggcttacg aatgggtgga
     2221 atttgccgac agcgatgatt tgcccgacgc atttcacgag ctgaacatca gaaattgcgg
     2281 ataacgcccc cttttccaaa caaatgccgt caaacagatg ccgtcattcc cgcgcgggcg
     2341 ggaatctagg acgtaaaatc tgaagaaacc gttttacccg ataagtttcc gtgccgacaa
     2401 ggctggattc ccgcccgcgc gcaagtttcc gaagccatcc ttttggccga aggtcaaaaa
     2461 tcagccgtta ccgagtatta cctgaataac ggcgaatggc cgaaagacaa cgcttctgcc
     2521 ggcgtggcat ccgcctccga catcaaaggc aaatatgttc agaaagttga agtcaacaac
     2581 ggcgtcgtca ccgcccaaat gaatccaagc ggcgtaaaca aagaaatcaa agacaaaaga
     2641 ctctccctgt gggccaagcg tgaaaacggt tcggtaaaat ggttctgcgg acagccggtt
     2701 aagcgcgacg acgccgccgc caaagccggc accgacgccg tcaccgccga caccaccggc
     2761 accaaaatcg aaaccaagca cctgccgtca acctgccgcg atgaatcatc tgccgtttgc
     2821 acgaaacacc tcacgccgat ttcaaatact ttcgccgttg ccgggtattg cccgaatcac
     2881 ggcatatggc cggaaaacaa cgacaaggcc ggcgtggcat ccccctccga catcaaaggc
     2941 aaatatgttg aaagcgttac ggtcgcaaaa ggcgtcgtta ccgccaaaat gctttcaagc
     3001 ggcgtaaaca aagaaatcca aggcaaaaaa ctctccctgt gggccaagcg tgaaaacggt
     3061 tcggtaaaat ggttctgcgg acagccggtt aagcgcgacg acaccgccgc caaagccggc
     3121 accgacaacg gcggcaaagg caaaatcgaa accaagcacc tgccgtcaac ctgccgcgat
     3181 aaggcatctg atgccaacta aggcaaatta ggccttaaat tttaaataaa tcaagcggta
     3241 agtgatttcc cacggccgcc cggatcaacc cgggcggctt gtcttttaag ggtttgcaag
     3301 gcgggcgggg tcgtccgttt cggtggaaat aatatacccg cgcgcaagtt tccgaagcca
     3361 tccttttggc cgaaggtcaa aaaaaggtca aaaatcagcc gttgccgggt attgcccgaa
     3421 tcacggcata tggccggaaa acttcgtcat tcccgcgaaa gcgggaatcc agtccgttca
     3481 gtttcggtca tttccgataa attcctgttg cttttcattt ctagattccc gcctgcgcgg
     3541 gaatgacggc ggagcggttt ccgttgctcc cgataaattc ctaaaactta aaatttcatc
     3601 attcctacaa ggacagaaaa ccaaaaacag aaacctaaaa ttcgtcattc ccgcaaaagc
     3661 gggaatctag ccttgtcggc acggaaactt atcgggtaaa aaggtttctc cggtcctgag
     3721 tcctggattc ccactttcgt gggaatgacg ggatttaatg atgccgccgg caacgaaaaa
     3781 atcga
//
LOCUS       DAXFZM010000123         3752 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.124, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000123 DAXFZM010000000
VERSION     DAXFZM010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3752)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3752)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3752
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.124"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..507
                     /locus_tag="ACFJAG_002001"
     CDS             <1..507
                     /locus_tag="ACFJAG_002001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009425469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HFC3981208.1"
                     /translation="VSFDMSNPTVLRMGLPLYIASLRRGAIYKVWQFVEDALRAVVPA
                     DSFEPTAQKLKLFKAGAATILFYEDQNVVKGLQEQFPAYAANFPVWADQANAMVQYAV
                     WTTLAAVGAGANLQHYNPLPDVAIAKAWNIPENWLLRAQMVIGGIEGAAGEKVFEPVA
                     ERLKVFGA"
     gene            complement(562..1017)
                     /locus_tag="ACFJAG_002002"
     CDS             complement(562..1017)
                     /locus_tag="ACFJAG_002002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four-helix bundle copper-binding protein"
                     /protein_id="HFC3981209.1"
                     /translation="MNRRQFLGSAAAVSLASAASFARAHGHADYHHHHDMQPAAASAY
                     TAVRQTAAHCLDAGQVCLTHCLSLLTQGDTSMSDCAVAVRQMLALCGAVHDLAAQNSP
                     LTRDAAKVCLEACKQCAKACKEHSAHHAECKACYESCLDCIKECEKLAA"
     gene            complement(1273..2643)
                     /gene="ffh"
                     /locus_tag="ACFJAG_002003"
     CDS             complement(1273..2643)
                     /gene="ffh"
                     /locus_tag="ACFJAG_002003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0048501 - signal recognition particle,
                     plasma membrane targeting [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005048 - signal sequence binding
                     [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HFC3981210.1"
                     /translation="MLDNLTGRFSNVFKNIRGQAKLTEDNIKEALREVRLALLEADVA
                     LPVVKEFVNNVKEKALGQEVAGSLTPDQAFIGVVNQALVELMGKENKTLDLSVSPPAI
                     ILMAGLQGAGKTTTVGKLARLLKNDQKKKVLVVSADVYRPAAIEQLRLLAEQVGVDFF
                     PSDTNQKPVEIATAAVDYAKKHFYDVLMVDTAGRLAIDEEMMNEIKALHAVVNPVETL
                     FVIDAMLGQDAVNTAQAFNEALPLNGVVLTKMDGDSRGGAALSVRHVTGKPIKFIGVG
                     EKINGLEPFHPDRLASRILGMGDVLTLIEDVQKGIDEEAAAKMAKKLQKGKGFDLNDF
                     KEQIQQMRNMGGLENLMSKMPGELGQISKQIPEGTAEKAMGKVEAIINSMTPKERANP
                     ALLKAGRKRRIAMGAGTTVQEVNKLLKQFEQMQQMMKMFSGNGLGKLMRLAKGMKGMK
                     GMFPGL"
     gene            2863..3669
                     /locus_tag="ACFJAG_002004"
     CDS             2863..3669
                     /locus_tag="ACFJAG_002004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inner membrane protein YpjD"
                     /protein_id="HFC3981211.1"
                     /translation="MPTVFIFLTAVYAGLGAFAWHCQQQGRGRDYPWKTELPVLGAAL
                     TVHGAALLMPVIQDKIIIMGFGYSGSLIVWMMLFIYFAGSFFYPLRGVQLLLYPCAAL
                     MLLSGLVFPGKFSGYEITDFPFMLHIGTSLLAYGLFGIATLLSVLSLLLHRSLHRRNF
                     SKLAGFLPSLLSLEKLMFQAMWAGFILLTYSVVSGTFFAEAVFGKPMTFTHKTVFGIL
                     SWLIYGGLLLKHSMTAWRGKKAAVWTIIGFVSLMIAYMGSKFVLEIILKR"
BASE COUNT          825 a          929 c         1011 g          987 t
ORIGIN      
        1 gtcagtttcg atatgtccaa tcctacggtg ttacgcatgg gattaccctt atatattgcg
       61 tccctaagaa ggggcgcaat atataaggtg tggcaatttg tcgaagacgc gctgcgtgcc
      121 gtcgtgcctg ccgacagttt tgaaccgacc gcgcaaaaat tgaagctgtt taaggcgggc
      181 gcggcaacca ttttgtttta tgaagatcaa aatgtcgtca aaggtttgca ggagcagttc
      241 cctgcttatg ccgccaactt tcccgtttgg gcggaccagg cgaacgctat ggtacagtat
      301 gccgtctgga cgacacttgc cgcggtcggt gcaggtgcaa atctgcaaca ttacaacccc
      361 ttgcccgatg tggcgattgc taaagcgtgg aatattcccg aaaactggct gttgcgcgcg
      421 caaatggtta tcggcggtat tgaaggggcg gcaggtgaaa aggtctttga acccgttgcg
      481 gaacgtttga aagtgttcgg cgcataattt cgcggtcaaa aaaatgccgt ctgaaccccg
      541 ttcagacggc atttttcagt atcaggcggc gagtttttcg cattctttga tacagtcgag
      601 gcaggactcg taacaggctt tgcattccgc atggtgggcg gagtgttctt tacaggcttt
      661 ggcacactgt ttgcacgctt cgaggcacac ttttgccgcg tcgcgtgtca gaggggaatt
      721 ttgtgcggca aggtcgtgca ccgcgccgca taaggcaagc atctggcgca cggcaaccgc
      781 acagtcggac atagacgtgt cgccctgagt gagcagggac aggcagtggg tcaggcaaac
      841 ctgtccggca tccagacagt gtgcggcagt ttggcggacg gcggtgtagg cggatgcggc
      901 ggcaggctgc atatcgtgat gatggtggta gtcggcgtgt ccgtgcgcac gcgcgaaaga
      961 ggcggcggaa gccaaagaga cggcagcggc gctgcccaaa aattgacgac ggttcatgat
     1021 tttttccttt atgtttcaac atgcgggtcc ggtataaggt acacacttac catactgccc
     1081 tggccggatc ggtacgattt tctgaataat tgcttgattt tgcaggtgtg aaattgtcgc
     1141 acgagcaggc atgttttagc tattcggaaa ttcgaggaag ggtgcatcaa cctgttttga
     1201 aatgatgcgc agacatggta acagacaaaa agccgtctga aaatcgtttt agacggcttt
     1261 tgttttcaaa cattaaagac cgggaaacat tcccttcatt cccttcatgc ctttggccaa
     1321 gcgcatcagt ttgcccaaac cgttgccgct gaacatcttc atcatctgct gcatttgttc
     1381 aaactgtttg agcaatttgt tcacttcctg cacggtcgtg cccgcgccca tcgcaatacg
     1441 gcgtttgcgg ccggctttga gcagggcagg gttggcgcgt tctttagggg tcatcgagtt
     1501 gatgatggct tctactttgc ccatcgcttt ttcagccgta ccttcgggga tttgtttcga
     1561 tatttgaccc agttcgcccg gcattttcga catcaggttt tccaaaccgc ccatattgcg
     1621 catttgctgg atttgttctt taaaatcatt gaggtcaaag cctttgcctt tttgcagctt
     1681 tttcgccatt ttggcggcgg cttcttcatc aatacctttt tgaacgtctt caatcagggt
     1741 caatacgtcg cccatgccga ggatacggct ggcaagacgg tcggggtgga aaggttcgag
     1801 gccgttgatt ttctcgccga cgccgataaa tttaatcggt ttgccggtta catggcgtac
     1861 ggacaatgcc gcaccgccgc gcgagtcgcc gtccatcttg gtcaatacga cgccgttcag
     1921 cggcagggct tcattaaatg cctgagcggt atttaccgca tcctgaccca gcatggcatc
     1981 gataacgaac aaagtttcaa ccgggttgac caccgcatga agcgctttga tttcgttcat
     2041 catctcttca tcgattgcca aacggccggc ggtatcgacc atcaatacat cgtaaaaatg
     2101 ttttttggcg taatcaacgg cggcagttgc aatctcaacc ggtttttggt tggtatcgga
     2161 tgggaaaaaa tctacgccga cctgttcggc caacaggcgc agctgttcaa tcgcggcagg
     2221 gcggtaaacg tcggcggata ccaccaaaac ttttttcttc tgatcgtttt tcagcaggcg
     2281 ggcgagtttg ccgacggttg ttgtcttacc ggcaccctgc aaaccggcca tcaaaatgat
     2341 ggcaggcggt gaaaccgata aatccagtgt tttgttttcc ttgcccatca gttcgactaa
     2401 ggcttggttg accacgccga taaaggcttg gtcaggcgtc aggctgcccg ccacttcctg
     2461 accgagggcc ttttctttga cgttgttgac gaactctttg acgacaggca gggcgacatc
     2521 cgcctcaagc agggcgagtc ggacttcgcg caaggcttct ttaatattgt cttcggtcag
     2581 tttggcctgc ccccggatgt ttttgaagac attgctgaag cggccggtta aattgtctaa
     2641 catactggtc cttggtctga ataagaatag cttgccccat caggggcatt ctttgttaaa
     2701 ataaaatcaa aataatttga tgcggcttgt gtgccggaca gcatatcggc aaatccgtca
     2761 aggcttgccc gaaacgggga ttttacaatt ccaacgttaa aagttccaat atttcataag
     2821 cggccgcata cggcgcaaca gtatagatag agaaagtcca ccatgccgac agttttcatc
     2881 tttttgacgg cggtttacgc aggattgggt gcatttgcat ggcactgcca acagcagggg
     2941 cgcggccggg attacccgtg gaagacggaa ttgccggttt tgggcgcggc attgaccgtc
     3001 cacggcgcgg cactgctgat gccggtcatt caagacaaaa tcatcattat gggcttcggg
     3061 tattccggca gcctgattgt ttggatgatg ctgtttattt attttgccgg cagctttttt
     3121 tatccgctgc gcggagtgca gttgctgctg tatccttgcg ccgcactgat gctgctgtca
     3181 ggtttggttt tcccgggaaa attctcggga tatgaaatta ccgactttcc ctttatgctg
     3241 catatcggca catcactgct tgcatacggg ctgttcggca tcgcaacatt attgtccgtt
     3301 ttgagcttgc tgctgcaccg gagcctgcac cgcagaaact tctccaagct cgcaggattc
     3361 ctgccgtcgc tgctcagttt ggaaaaactc atgttccagg ccatgtgggc aggtttcatc
     3421 ctgctgacct attccgtcgt cagcggcaca ttctttgccg aagccgtatt cggcaaaccc
     3481 atgacattta cccataaaac cgtattcggc atattgtcat ggctgattta cggaggactg
     3541 ctgctcaaac acagcatgac cgcatggcgc ggcaaaaaag ccgccgtgtg gaccatcatc
     3601 ggatttgtca gccttatgat tgcctatatg ggcagcaagt tcgtattgga aatcattctg
     3661 aaaagataag aagagccaac agatgccgtc tgaagccccg agtttcaggc ggcatattca
     3721 caaaggcgca tcagccggag gagaagagga gg
//
LOCUS       DAXFZM010000124         3723 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.125, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000124 DAXFZM010000000
VERSION     DAXFZM010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3723)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3723)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3723
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.125"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(455..3223)
                     /gene="tdfH"
                     /locus_tag="ACFJAG_002005"
     CDS             complement(455..3223)
                     /gene="tdfH"
                     /locus_tag="ACFJAG_002005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent zinc piracy receptor TdfH"
                     /protein_id="HFC3981212.1"
                     /translation="MRSSFRLKPICFYLMGVMLYHHSYAEDAGRAGSEAQIQVLEDVH
                     VKAKRVPKDKKVFTDARAVSTRQDIFKSGENLDNIVRSIPGAFTQQDKSSGIVSLNIR
                     GDSGFGRVNTMVDGITQTFYSTSTDAGRAGGSSQFGASVDSNFIAGLDVVKGSFSGSA
                     GINSLAGSANLRTLGVDDVVQGNNTYGLLLKGLTGTNSTKGNAMAAIGARKWLESGAS
                     VGVLYGHSRRGVAQNYRVGGGGQHIGNFGAEYLERRKQRYFVQEGGLKFNSNSGKWER
                     DFQRPYWKTKWYQKYNDPQELQKYIEGHDKSWRENLAPQYDITPIDPSGLKQQSAGNL
                     FKLEYDGVFNKYTAQFRDLNTKIGSRKIINRNYQFNYGLSLNPYTNLNLTAAYNSGRQ
                     KYPKGSKFTGWGLLKDFETYNNAKILDLNNTATFRLPRETELQTTLGFNYFHNEYGKN
                     RFPEELGLFFDGPDQDNGLYSYLGRFKGDKGLLPQKSTIVQPAGSQYFNTFYFDAALK
                     KDIYRLNYSTNAINYRFGGEYTGYYGSENEFKRAFGENSPAYKEHCDPSCGLYEPVLK
                     KYGKKRANNHSVSISADFGDYFMPFAGYSRTHRMPNIQEMYFSQIGDSGVHTALKPER
                     ANTWQFGFNTYKKGLLKQDDILGLKLVGYRSRIDNYIHNVYGKWWDLNGDIPSWVGST
                     GLAYTIRHRNFKDKVHKHGFELELNYDYGRFFTNLSYAYQKSTQPTNFSDASESPNNA
                     SKEDQLKQGYGLSRVSALPRDYGRLEVGTRWLGNKLTLGGAMRYFGKSIRATAEERYI
                     DGTTGANTSDVRQLGKRSIKQTETLARQPLIFDFYAAYEPKKNLIFRAEVKNLFDRRY
                     IDPLDAGNDAATQRYYSSFDPKDKDEEVTCNDDNTLCNGKYGGTSKSVLTNFARGRTF
                     LMTMSYKF"
BASE COUNT          842 a          923 c          957 g         1001 t
ORIGIN      
        1 aggttgtggg atttatcgga aaaacagaaa cctctccgcc gccattctca cgaaagtggg
       61 aatccggaaa gctaaagcca caggaattta tcggaaatgg ctgaaattta tagtggatta
      121 acaaaaatca ggacaaggcg acgaagctgc agacagtaca aatagtacgg caaggcgagg
      181 caacgccgta cctgtttttg ttaatccact ataaaaaaac tgattcccgc ttttgcggga
      241 atgacgactc ataaattacc cgaaacaacc aaaaataacc gaaatcaaaa accggcttcc
      301 ctgcgtggga atgaaatgga tttttctttg agttgccgat gcgataaaac ggattggcat
      361 aggcttgcgg caggatgatg cgtttgggga aacaaatgcc gtctgaaggg ctttcagacg
      421 gcattgcagt ttttccacaa aacgcgggct gcctttaaaa cttgtagctc atcgtcatca
      481 agaaggtgcg tccgcgtgcg aaattggtca atacgctttt gcttgtgccg ccgtatttgc
      541 cgttgcataa cgtgttatca tcattacacg ttacttcttc gtccttgtct ttcgggtcga
      601 acgagctgta ataacgctgc gttgccgcat cattgcccgc atcgagcgga tcgatataac
      661 gcctgtcgaa caggtttttg acttcggcgc ggaaaataag gtttttcttc ggctcgtaag
      721 cggcgtaaaa atcaaaaatc aaaggctgtc gggcaagggt ttcggtttgt ttgatggaac
      781 gcttgcccag ttgccggaca tcgctggtat ttgccccggt ggtgccgtcg atatagcgtt
      841 cttctgccgt cgcgcggatg ctcttgccga aatagcgcat cgcgccgccc aaagtcagtt
      901 tgttgcccaa ccagcgcgta ccgacttcca aacgtccgta atctcgcggc agggcggaaa
      961 ccctgctcag cccataacct tgtttgagtt ggtcttcttt ggacgcattg ttgggcgatt
     1021 cgctcgcatc gctgaaattg gtcggttgcg tgcttttttg ataggcgtaa gaaaggttgg
     1081 tgaaaaaacg cccataatcg taattcagct ccagctcaaa accgtgtttg tgcactttgt
     1141 ctttgaaatt gcggtgtcgg atggtgtagg caagcccggt gctgccgacc cagctcggaa
     1201 tatccccgtt caaatcccac catttcccgt aaacgttgtg gatgtagttg tcaatgcggc
     1261 tgcggtagcc gaccagtttc aatcctaata tatcatcttg ttttaacaat ccttttttat
     1321 aggtattgaa gccaaattgc caagtgtttg cgcgctctgg ttttaaggcg gtgtgaacgc
     1381 cggagtcgcc gatttgggaa aaatacattt cttggatgtt gggcatacgg tgtgtgcgcg
     1441 aatagccggc gaacggcatg aaataatcgc cgaagtccgc actaatgctg accgaatggt
     1501 tgttggcgcg ctttttgccg tattttttca atacgggttc ataaagcccg cagctcgggt
     1561 cgcaatgttc cttgtatgcc ggcgagtttt ctccgaatgc ccgcttaaat tcgttttccg
     1621 agccgtaata gcccgtatat tcgccgccga aacggtagtt gattgcattg gtgctgtagt
     1681 ttaagcggta aatgtctttt ttgagcgcgg catcgaagta gaacgtgttg aaatattgac
     1741 tgccggccgg ttggacgatg gttgattttt ggggcagcag ccctttatcg cccttaaacc
     1801 gccccaaata ggaataaagc ccgttgtcct gatccggacc gtcgaaaaac agccccaatt
     1861 cttcaggaaa gcggtttttg ccgtattcgt tgtggaaata attgaagccc aaagtggttt
     1921 gcaactcggt ttcgcggggc agccggaagg tggcggtgtt gttgaggtcg aggattttcg
     1981 cgttgttgta ggtttcaaaa tcctttaaaa gcccccagcc tgtaaacttc gaccctttcg
     2041 gatatttctg cctgcccgaa ttgtaggctg cggtcagatt gaggttggta tacgggttca
     2101 aagacaaacc gtaattgaat tgataattgc ggttgatgat tttgcggctg ccgattttgg
     2161 tgtttaaatc gcgaaattgc gccgtgtatt tattgaatac gccgtcgtat tccaatttaa
     2221 acagattacc tgccgactgc tgcttcaggc cggacggatc gatgggggtg atgtcgtatt
     2281 gcggcgccag gttttcccgc cagcttttgt catgaccttc gatgtatttt tgcagttctt
     2341 gggggtcatt gtatttttga taccacttgg ttttccagta cggcctttgg aaatcccgct
     2401 cccattttcc gctgttggaa ttgaatttca acccgccttc ttgtacaaaa tatcgctgct
     2461 tgcgccgttc cagatattcc gcgccaaaat ttccgatgtg ctgcccgccg ccgcccacgc
     2521 ggtaattttg cgccacgccg cgcctgctgt gcccgtaaag cacaccgaca gatgctccgc
     2581 tttccagcca tttgcgcgca cctatcgccg ccatcgcatt acctttggtt gaattggtgc
     2641 cggtcagacc ttttagcagc aggccgtagg tattattgcc ctgaacgacg tcatccacgc
     2701 ctaaagtccg cagattcgcc gaaccggcaa ggctgttgat gcctgccgag ccgctgaagc
     2761 tgcctttgac gacatccagt ccggcaataa aattgctgtc gacagatgca ccgaattgag
     2821 atgaaccgcc tgccctgccc gcatcggtag aagtcgaata aaaggtctgc gtgatgccgt
     2881 ccaccatcgt attgacccgc ccgaacccgc tgtcgccgcg aatattcaaa gacacaatgc
     2941 ccgagctttt atcttgctgt gtaaacgcac cgggtatgct gcgtacgatg ttgtcgaggt
     3001 tttcgccgga tttgaatata tcctgacggg tcgatacggc acgcgcatcg gtaaacactt
     3061 ttttgtcttt cggtacgcgc ttcgccttga cgtgcacgtc ttccaaaacc tgtatctgcg
     3121 cctcgctgcc cgcgcgccct gcatcttcgg cataactatg atgatatagc ataacaccca
     3181 taagataaaa acaaatcggc ttcaaccgga aagaagatct catattttcc tcaacaataa
     3241 acaatcaatc caacatgtct accgttttca tcgaatccgc cctttcgacc acccggccct
     3301 acgcaaccga accgtcattc ccacggaagt gggaatctag aatcttgggg tttcagtcat
     3361 ttccgataga ttcccgccgc gtcaggggtc cggattcccg cctgcgcggg aatgacgaat
     3421 ttcgagattg cggtattgtc gggaatgacg ggtttcaaga ttacggtgtt gtcgggaatg
     3481 acgggtttta agattgcggt gttgtcggaa cgcaaccgaa ccgtcattcc cacggaagtg
     3541 ggaatctaga atctcggggt ttcagtcatt tccgatagat tcccgccgcg tcaggggtcc
     3601 ggattcccgc ctgcgcggga atgacgggtt tcgagattgc ggtgttgtcg gacgggtttc
     3661 gagactacgg tgttgtcgga acgcaaccga accgtcattc ccacggaagt gggaatctag
     3721 gac
//
LOCUS       DAXFZM010000125         3565 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.126, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000125 DAXFZM010000000
VERSION     DAXFZM010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3565)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3565)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3565
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.126"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(160..339)
                     /locus_tag="ACFJAG_002006"
     CDS             complement(160..339)
                     /locus_tag="ACFJAG_002006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HFC3981213.1"
                     /translation="MKKCRDIALLLSKHQDRETTPGEKISIYMHLLFCPHCREYKRQL
                     QTIKISLAKTTRTSK"
     gene            complement(345..932)
                     /locus_tag="ACFJAG_002007"
     CDS             complement(345..932)
                     /locus_tag="ACFJAG_002007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HFC3981214.1"
                     /translation="MPLPDLTDAELMESRKLLLHFARLQLPDHPDLAEDLVQETLLSA
                     YSAGDSFQGRALVNSWLFAILKNKIIDALRQIGRQRKVFTALDDELLDEAFESHFSQN
                     GHWTPEGQPQHWNTPEKSLNNNEFQKILQSCLYNLPENTARVFTLKEILGFSSNEIQQ
                     MCGISTSNYHTIMHRARESLRQCLQIKWFNQENPK"
     gene            complement(954..1700)
                     /locus_tag="ACFJAG_002008"
     CDS             complement(954..1700)
                     /locus_tag="ACFJAG_002008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2063 domain-containing protein"
                     /protein_id="HFC3981215.1"
                     /translation="MQPETSAQYQHRFSQAIRGGEAADGLPQDRLNVYIRLIRNNIHS
                     FIDRCYTETRQYFDSKEWSRLKEGFVRDARAQTPYFQEIPGEFLQYCQSPPLSDGILA
                     LMDFEYTQLLAEVAQIPDIPDIHYSNDSKYTPSPAAFIRQYRYDVTHDLQEAETALLI
                     WRNAEDDVMYQTLDGFDMMLLEIMGSSALSFDTLAQTLVEFMPKADNWKNILLGKWSG
                     WIEQRIIIPSLSAISENMEGNSPSQNHLSA"
     gene            complement(1690..2532)
                     /locus_tag="ACFJAG_002009"
     CDS             complement(1690..2532)
                     /locus_tag="ACFJAG_002009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF692 domain-containing protein"
                     /protein_id="HFC3981216.1"
                     /translation="MIQHAGLGYRRDLAEDFLSLSENSPICFIEAAPENWLKMGGRAR
                     KQFDRVAERLPLALHGLSMSLGGQAPLDTDLIDGIKEMMCRYDCTFFSDHLSYCHDGG
                     HLYDLLPLPFTEEMVHHTARRIREVQDRLGCRIAVENTSYYLHSPLAEMNEVEFLNAV
                     AREADCGIHLDVNNIYVNAVNHGLLSPEAFLENVDAGRVCYIHIAGHDAETPELLIDT
                     HGAAVLPTVWDLLELAYTKLPTIPPTLLERDFNFPPFAELEAEVAKIADYQTRAGKEY
                     RRAA"
     gene            complement(2650..2958)
                     /locus_tag="ACFJAG_002010"
     CDS             complement(2650..2958)
                     /locus_tag="ACFJAG_002010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981217.1"
                     /translation="MNKNIAAALAGALSLSLAAGAVAAHKPASNATGVQKSAQGSCGA
                     SKSAEGSCGAAASKAGEGKCGEGKCGATVKKAHKHTKASKAKAKSAEGKCGEGKCGSK
                     "
     gene            complement(3032..3481)
                     /locus_tag="ACFJAG_002011"
     CDS             complement(3032..3481)
                     /locus_tag="ACFJAG_002011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HFC3981218.1"
                     /translation="MKIGTTWQTASAMLVLRLFAAYEFLESGLQKWNGENWFSEINDQ
                     FPFPFNLLPDALNWNLAMYAELLLPVLLLLGLATRLSALGLMVVTAVAWAAVHAGSGY
                     NVCDNGYKMALIYIVVLIPLLFQGAGGWSLDTLLKKLFCPKCRLKQD"
BASE COUNT          836 a          821 c          944 g          964 t
ORIGIN      
        1 ggaaattgat gcagccttcg tgttttacgt atttatatat tccgtatgga ggaatatgct
       61 gcttttgaag agtgtattat ggatgaactg ccgataacag taaatcggtt tgatttgttt
      121 ccgtcagctt atgccgtctg aagccctttc agacggcatt tattttgaag ttctggttgt
      181 ttttgccagt gatattttga tggtttgaag ctgtctttta tattcccggc aatgcgggca
      241 gaacagcagg tgcatatata tggaaatctt ctcgcccggg gtggtttccc ggtcctgatg
      301 tttggaaaga agcagggcaa tatcgcggca ttttttcata acgtttactt cgggttttct
      361 tggttgaacc atttgatttg caggcattgg cgcaatgatt ctcgggcgcg gtgcataatg
      421 gtgtggtagt tggacgtgct gataccgcac atttgttgta tttcgttgga tgaaaaaccg
      481 agtatttcct tcagggtgaa tacccgtgcg gtgttttcag gcaggttgta taggcagctt
      541 tgcagaattt tttggaattc gttgttattt aatgattttt ccggagtgtt ccaatgttgc
      601 ggctgccctt ccggcgtcca atgcccgttt tgggaaaaat ggctttcaaa tgcttcatcc
      661 agcagctcgt catccagtgc ggtaaagact ttcctctgcc tcccgatttg acgtaatgcg
      721 tcaataattt tgtttttcaa tatggcaaaa agccagctgt tgacaagtgc cctgccttga
      781 aaactgtcgc ctgcgctgta tgcggacagc aatgtttcct gcactaaatc ttcagccaaa
      841 tcagggtggt cgggcaactg gagccgcgca aaatgcagaa gcagtttgcg cgactccatt
      901 aattcggcat cggtcaggtc gggtagcggc atagtatcgg gaacaaggta attttatgcg
      961 gatagatggt tttggctcgg ggaattgcct tccatatttt cggatatggc ggacaaggag
     1021 gggatgataa tcctttgttc aatccagcct gaccatttcc caagcaaaat atttttccaa
     1081 ttatcggctt taggcataaa ttcgacaagg gtttgggcga gggtgtcaaa cgaaagcgcg
     1141 gaggaaccca ttatctccag cagcatcata tcgaagccgt ccaatgtttg gtacatcaca
     1201 tcatcttcgg cgtttcgcca tattaacaag gctgtttccg cttcctgcaa atcatgggta
     1261 acatcgtatc gatattgccg gataaaggcc gcaggggagg gcgtgtattt gctgtcattt
     1321 gaataatgaa tgtcgggaat atccggaatt tgtgcaactt ctgccagcaa ttgggtatat
     1381 tcaaaatcca tcagcgccaa aatgccgtct gaaagcggcg ggctttggca atattgtagg
     1441 aactcgccgg ggatttcttg aaaatagggc gtttgggcac gcgcgtcgcg gacgaaacct
     1501 tctttcagac ggctccattc tttgctgtca aagtattgcc gcgtttcggt atagcagcgg
     1561 tcgataaagc tgtggatatt gttgcgtatc aggcggatat agacgttcaa tcggtcttgc
     1621 ggcagaccgt ctgcggcttc gcccccgcgt atggcttggg agaaacggtg ctggtattgg
     1681 gcggaggttt caggctgcac ggcggtattc ctttccggca cgcgtttgat aatcggcaat
     1741 tttggcaact tcggcttcga gttcggcaaa aggtgggaaa ttgaaatcgc gttccaacag
     1801 ggtgggaggg atggtgggaa gcttggtgta ggcgagttcg agcaagtccc aaacggtcgg
     1861 taaaaccgcc gcgccgtggg tatcaatcaa aagctcgggg gtttcggcat cgtgtccggc
     1921 gatgtggatg tagcacacgc gccctgcgtc cacattctct aaaaaggcct caggcgacag
     1981 caggccgtga ttgacggcgt tgacgtaaat attgttcaca tccaaatgaa taccgcagtc
     2041 ggcttcacgg gcaaccgcgt tgaggaactc gacctcgttc atctcggcaa gcggagaatg
     2101 caggtagtag gacgtgtttt ccacggcgat gcggcagccc aaacggtctt gcacttcgcg
     2161 gatacgccgc gccgtatgat gcaccatttc ttcagtgaaa ggcagcggca acaaatcgta
     2221 aagatgaccg ccgtcgtggc agtagctcaa atgatcggag aaaaacgtgc agtcataacg
     2281 gcacatcatt tctttgatgc cgtctatcaa atcggtatcc agcggggctt gtccgcccag
     2341 cgacatagat aatccgtgca acgccagcgg cagccgttcc gccacacggt caaactgttt
     2401 gcgcgccctg ccgcccattt tcagccagtt ttccggtgcg gcttcgataa agcatatcgg
     2461 gctgttttcg gaaagcgaga gaaagtcttc cgccaaatcg cggcggtagc ccaagcctgc
     2521 gtgttgaatc atatttttac ccggttcgga tggcacaaaa gaatgatgtg cttgttaaaa
     2581 aaaatctttg tttgccgtta aaaaagccgc attttactga aaaacgcggc ttggtttgaa
     2641 ggggcgggat tatttagaac cgcatttgcc ttcgccgcat ttgccttcgg cagatttggc
     2701 tttggcttta gatgctttgg tgtgtttgtg ggcttttttt acagttgcac cgcatttgcc
     2761 ctcgccgcat ttgccttcgc ctgctttaga agcagccgcg ccgcacgaac cttcggcaga
     2821 tttggatgcg ccgcaagagc cttgggcgga tttttgaacg cctgttgcgt tgcttgccgg
     2881 tttgtgggcg gcaacggcgc cggcggccag agacagggat aaagcaccgg cgagtgcggc
     2941 agcaatattt ttgttcattt ctatttcctt ttcagaatat caagttaacg agataaggtt
     3001 ggaatgttta aagtcggatt ccacgactga atcaatcttg tttcagacgg catttggggc
     3061 aaaacagttt tttcagcagc gtatccagcg accatccgcc cgcaccctgg aaaagcagcg
     3121 ggattaatac cacgatataa attaaagcca ttttataacc gttgtcgcag acattgtaac
     3181 ccgaaccggc gtgaaccgca gcccaagcga cggcggtaac gaccatcagc cccaatgccg
     3241 acaggcgcgt tgccaaaccc aaaagcaaca gtacgggcag caaaagctcc gcatacatgg
     3301 cgagattcca gtttaacgcg tccggcagca agttgaacgg gaatggaaac tgatcgttga
     3361 tttcggaaaa ccaattctcc ccgttccatt tttgcaaacc cgattccaaa aattcatatg
     3421 cggcaaacag acgcaaaacc agcatagcgg atgccgtctg ccaagttgtt ccgattttca
     3481 taagtgttcc tgtttttgtt cctgttgata ccccgttaga ggattttgtc ggaaaaactg
     3541 acacccgtca gctaataatt taaca
//
LOCUS       DAXFZM010000126         3562 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.127, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000126 DAXFZM010000000
VERSION     DAXFZM010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3562)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3562)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3562
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.127"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            98..3297
                     /gene="nalP"
                     /locus_tag="ACFJAG_002012"
                     /pseudo
     CDS             98..3297
                     /gene="nalP"
                     /locus_tag="ACFJAG_002012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248900.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="serine endopeptidase autotransporter NalP"
BASE COUNT          951 a          973 c          976 g          662 t
ORIGIN      
        1 gatataattc aaaatataaa aatgggttac atctggacat tacgaaattt ttattccttc
       61 gcctgaattc tattgtcaga ttcaaagaga cctcatcatg cgaaccacct caaccttccc
      121 tacaaaaact ttcaaaccgg ctgccatggc gttagctgtt gcaacaacac tttctgcctg
      181 cttaggcggc ggcggaggcg gcacttctgc tcccgacttt aatgcaggcg gcaccggtat
      241 cggcagcaac agcagggcaa cgatagcgga atcagcagca gtatcttacg ccggtataaa
      301 aaacgaaatg tgcaaagaca gaagcatgct ctgtgccggt cgggatgacg ttgcggttac
      361 agacagggat gccaaaatca aagcccccga atctgcatac cggagacttt tcaaacccaa
      421 atgaccaata ttaagaatat gatcaacctc aaacctgcaa ttgaagcagg ctatacagga
      481 cgcggggtag aggtaggtat cgtcgataca ggcgaatccg tcggcagcat atcctttccc
      541 gaactgtatg gcagaaaaga acacggctat aacgaaaatt acaaaaacaa attacaaaaa
      601 ctatacggcg tatatgcgga aggaagcgcc tgaagacaga ggcggtaaag acattgaagc
      661 ttctttggac aatgaggccg ttatagagac tgaagcaaag ccgacggata tccgccatgt
      721 aaaagaaatc ggacacatcg atgtggtctc ccatattatt ggcgggcgtt ccgtggacgg
      781 cagacctgca ggcggtattg cgcccgatgc gacgctacac ataatgaata cgcatgatgg
      841 aaccaagaac gagaaataat gtctgcagcc atccgcaatg catgggtcaa gctgggcgaa
      901 cgtggcgtgc gcatcgtcaa taacagtttt ggaacaacat cgagggcagg cactgccgac
      961 catttccaaa tagccaattc ggaggagcag taccgccaaa cgttgctcga ctattccggc
     1021 ggtgataaaa cagatgaggg tatccgcctg atgcaacaga gcgattaggg caacctgtcc
     1081 taccacatcc gtaataaaaa catccttttc atcttttcga caggcaatga cacacaagct
     1141 cagcccaaca cactgaccct attgccattt tatgaaaaga cgctcaaaaa ggcattatca
     1201 cagtcgcagg cgtagaccgc agtggagaaa agttcaatgg ctccaaccat tgcggaatta
     1261 ctgccatgtg gtgcctgtcg gcatcctatg aagcaaccgt ccatttcacc cgtacaagac
     1321 cgattcaagt tgccggaaca tccttttccg cacccatcgt aaccggcacg gcggctctgc
     1381 tgcagagata cccgtggatg agcaacgaca acctgcgtac cacgctgctg acgacggctc
     1441 aggacatcgg tgcagtcgga gtggacagca agttcggctg ggggctgctg gatgcgggta
     1501 aggccatgaa cggacccgcg tcctttccgt tcggcgactt taccgccgat acgaaaggta
     1561 catccgatat tgcctactcc ttccgtaacg acatttcagg cacgggcggt ctgatcaaaa
     1621 aaggcggcag ccaactgcaa ctgcacggca acaacaccta tacgggcaaa accgttatcg
     1681 aaggcggttc gctggtgtta tcggatatgc acgtcaaaac caaaggtgca ctgatttata
     1741 acggggcggc atccggcggc agcctgaaca gccacggcat tgtctatctg gcagataccg
     1801 accaatccgg cgcaaacgaa accgtacaca tcaaaaggcg gtctgcagct gggcgacaaa
     1861 ggtacgctgt acacacgttt gggcaaactg ctgaaagtgg acggtacggc gattaccgac
     1921 ggcaagctgt acatgtcggc acgcggcaag ggggcaggct atctcaacag taccggacga
     1981 catgttccct tcctgagtgc cgccaaaatc gggcaggatt attctttctt caaaaatatc
     2041 gaaaccgacg gcggtctgct ggcttccctc gacagcgtcg aaaaaacagc gggcagtgaa
     2101 ggcgacacgc cgtcctatta tgtccgtcgc ggcaatgcgg cacggactgc ttcggcagcg
     2161 gcacattccg cgcccgccgg tctgaaacac gccgtagaac agggcggcag caatctggaa
     2221 aacctgatgg tcgagctgga tgcctccgaa tcatccgcaa cacccgagac ggttgaaact
     2281 gcggtcgccg accgcacaga tatgccgggc atccgcctac ggcgcacaac tttccgcgca
     2341 gcggcagccg tacagcatgc gaataccgcc gacggcgtac gcatcttcaa cagtctcgcc
     2401 gctaccgtct atgccgacag tgccgccgcc catgccgata tgcagggacg ccgcctgaaa
     2461 gccgtatcgg acgggttgga ccacaacggt acgggtctgc gcgtcatcgc gcaaacccaa
     2521 caggacggtg gaacgtggga acagggcggt gtcgaaggca aaatgcgcgg cagtacccaa
     2581 actatcggca ttgccgcgaa aaccggcgaa aatacgacag cagccgccac actgggcata
     2641 ggacgcagca catggagcga aaacagtgca aatgcaaaaa ccgacagcat tagtctgttt
     2701 gcaggcatac ggcacgatgt gggcgatatc ggctatctca aaggcctgtt ctcctacgga
     2761 cgctacaaaa acagcatcag ccgcagcacc ggtgcggatg aatatgcgga aggcagcgtc
     2821 aacggcacgc tgatgcagct gggcgcactg ggtggtgtca acgttccgtt tgccgcaacg
     2881 ggagatttga cggttgaagg cggtctgcgc cacgacctgc tcaaacagga tgcattcgcc
     2941 gaaaaaggca gtgctttggg ctggagcggc aacagcctca ctgaaggcac actggtcgga
     3001 ctcgcgggtc tgaagctgtc gcaacccttg agcgataaag ccgtcctgtc tgcgacggcg
     3061 ggcgtggaac gcgacctgaa cggacgcgac tacgcggtaa cgggcggctt taccggcgcg
     3121 gctgcagcaa ccggcaagac gggtgcacgc aatatgccgc acacccgccg ggttgccggt
     3181 ctgggggtgg atgtcgaatt cggcaacggc tggaacggct tggcacgtta cagctacacc
     3241 ggttccaaac agtacggcaa ccacagcgga caaatcggcg taggctaccg gttctgacgg
     3301 acagaaaaca gacagccgca aagatcacgg tctttgcggc tgtttcttat gaaaagaaaa
     3361 ccctattcca attgcctgct tctattgttt caagacttct tccaaagatt cggcatcaat
     3421 cagacgtata gcggattaac aaaaatcagg acaaggcggc gggccgcaga cggtacaaat
     3481 ggtacggaac cgatccgccc ggtgcttggg cgccttaggg aaccgttccc tttgagccgg
     3541 ggcggggcaa cgacgtaccg gt
//
LOCUS       DAXFZM010000127         3464 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.128, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000127 DAXFZM010000000
VERSION     DAXFZM010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3464)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3464)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3464
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.128"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..2066
                     /locus_tag="ACFJAG_002013"
     CDS             <1..2066
                     /locus_tag="ACFJAG_002013"
                     /EC_number="2.7.6.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0015970 - guanosine tetraphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HFC3981219.1"
                     /translation="EQAELEKAVAYAFRAHDGQTRKSGDPYITHPIAVATQLALWHMD
                     IQGLCAGVMHDVLEDTGVTKGEMAAVFGNTVAEMVDGLSKLEKLKFEDHAEHQAESFR
                     KLILAMTKDVRVIVVKLADRLHNMRTLGSMRPDKRRRIARETLEIYAQIANRIGLNNA
                     YRELQDLSFQNLHPNRYETLKKAMDKSRKNRQDVVGKVLRAFGQRLVGANIEAKIKGR
                     EKNLYGIHQKMMAKKLRFAEVMDIYGFRVIVNSIPACYAALGTLHTLYQPKPGRFKDY
                     IAIPKSNGYQSLHTILVGPYGLPIEVQIRTREMDAVAEGGIVGHWSYKSDSKTVDQAV
                     LHTNQWLKNILDLQASSANAIEFLEHVKVDLFPNEIYILTPKGKILTLPKGATPVDFA
                     YAVHTDIGHKTVAARVNNVMMPLRTKLKTGDSVEIITSEHAKPNPAWLNFAVSGRARS
                     AIRQYIKNLNRHDAVVLGESLLQKALSSLLPKDVLLSDGIKEKYLADLNDKQTSFEEV
                     LYNVGMGHTLPVYVAMHIAELAGEHFGSEVRLSSIKVDGQESGHIHFAECCHPVPGDS
                     IRLLLVKGKGMIIHRDTCPTLLRSDPEQQLDADWENMNGQNYRVGLQVQSEDSHGLLA
                     LMAQAISDSGADIESVETPSKSQSGTEGFVEFKFLLKVKNLDQLNQIIQNLHSIPYIR
                     KVIRS"
     gene            complement(2133..3317)
                     /gene="coaBC"
                     /locus_tag="ACFJAG_002014"
     CDS             complement(2133..3317)
                     /gene="coaBC"
                     /locus_tag="ACFJAG_002014"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004632 - phosphopantothenate--cysteine
                     ligase activity [Evidence IEA];
                     GO_function: GO:0004633 - phosphopantothenoylcysteine
                     decarboxylase activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0015941 - pantothenate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HFC3981220.1"
                     /translation="MGKHILLGVTGSIAAYKSCELVRLLKKQGHSVTVVMSRSATEFV
                     SPLTFQALSGNPVLTDTHGGNGSNGMEHINLTRNADVFLIAPASMNTVAKICNGVADN
                     LLTNLAAARKCPLAIAPAMNVEMWLNPANQRNIAQLVSDGITVYMPGLGEQACRENGM
                     GRMPEPAELLDLLPDLWTPKILRDKKILITAGATFEAIDPVRGITNTSSGKMGVALAR
                     ACRAAGAEISLIHGQLQTTLPFGISDTVQAVSAEDMHRAVHRLIEKQDAFISVAAVSD
                     YKVKNRSTQKFKKDKNAKPLSIELDENPDTLASIASLPNPPFCIGFAAETENVMAYAR
                     EKRIKKKIPVIVANDVSIAMGKTTNQIVIIDDDAELSFPETSKDEAAMRIVERLAVYL
                     NK"
BASE COUNT          909 a          857 c          855 g          843 t
ORIGIN      
        1 aggaacaggc ggagcttgaa aaagctgtcg cctatgcgtt tcgcgcccac gacgggcaaa
       61 cccgcaaaag cggggatccc tacatcacgc atccgattgc cgttgcgacg cagctcgccc
      121 tttggcatat ggacatacag ggtctttgtg caggcgtgat gcacgacgta ttggaagata
      181 cgggcgtgac aaaaggggaa atggcggcgg tgttcggcaa tactgttgcc gagatggtgg
      241 acgggctgtc caaactcgaa aaactcaaat ttgaagatca tgcggaacat caggcggaga
      301 gtttccgcaa actgattttg gcgatgacca aagatgtgcg cgtcatcgtt gtcaaacttg
      361 ccgaccgcct gcacaatatg cggacgctcg gttcgatgcg cccggacaaa cgccgccgga
      421 ttgcaaggga aacccttgaa atctacgcac agattgccaa ccgcataggt ctgaataatg
      481 cgtatcggga gcttcaggat ttatcgttcc aaaacctgca tcccaaccgc tacgagactt
      541 taaaaaaagc gatggacaag agccggaaga acaggcagga cgttgtcggc aaagttttgc
      601 gcgcgttcgg ccagcggctg gtaggcgcga atatagaggc caaaatcaaa ggcagggaaa
      661 aaaacctgta cggcatccat cagaaaatga tggcgaaaaa gctgcgcttt gccgaggtta
      721 tggatattta cggtttccgc gtcattgtca acagcattcc cgcctgttat gccgcactcg
      781 gcacattgca caccctctat cagcccaagc ccggacggtt caaagactat atcgccattc
      841 cgaaaagcaa cggttatcaa agtctgcata cgattttggt cggcccctac ggcttgccga
      901 ttgaagttca gatacgcacg cgggaaatgg atgccgtggc ggaaggcggt attgtcggcc
      961 attggagcta taaatcagat tccaaaacgg tcgatcaggc agtgctgcac accaatcaat
     1021 ggttgaaaaa cattttagac ttgcaggcaa gcagcgccaa tgccattgag tttctcgaac
     1081 acgtcaaagt cgatttgttt ccgaacgaaa tctacatcct tactccgaaa ggaaaaatcc
     1141 taactttgcc caaaggggca acgcctgtcg attttgctta tgcggtgcat accgacattg
     1201 ggcataaaac agttgccgcg cgtgtcaata atgtgatgat gccgctgcgt acgaagctca
     1261 aaaccggtga ttctgttgaa attatcacat ccgaacacgc caaacccaat cccgcgtggt
     1321 tgaatttcgc cgtgtccggc agggcgcgca gtgccatacg ccaatatatt aaaaatctta
     1381 accggcacga tgcggtcgtt ttgggagaga gcctcttaca aaaagccttg tccagtttgc
     1441 tgcccaaaga tgtcctgctt tcagacggca tcaaagaaaa ataccttgcc gatctcaacg
     1501 acaaacagac ttcatttgag gaagtgctgt acaacgtcgg tatggggcat accctgcctg
     1561 tttatgtcgc catgcatatc gccgaattgg caggggagca tttcggcagc gaggtcaggc
     1621 tcagttccat taaagttgat ggtcaggaaa gcgggcatat tcattttgca gagtgctgcc
     1681 accctgttcc cggcgattcc atccgtttgc tgttggttaa gggaaaaggc atgattatcc
     1741 atagggatac ctgcccgacg ttgttgaggt ccgatcccga acagcagctg gatgcagact
     1801 gggaaaatat gaacgggcag aactaccgtg tcgggcttca agtccaatcg gaagacagcc
     1861 acggcctgtt ggcattaatg gcgcaagcga tttccgattc cggtgcggac atcgagtcgg
     1921 tcgaaacacc gtctaaatcc cagtcgggaa cggaaggttt tgtcgaattc aaattcttat
     1981 tgaaagtcaa gaatttggat cagttgaatc agattattca aaatctgcac agcatcccat
     2041 atatccgcaa agtcatcaga agttgaagca ggtaaaacgg gttgcctgtt aatcaaaagg
     2101 caacccgttt tatggtttat ccgttcaatt gcttatttgt tcaaatatac ggcaagcctt
     2161 tcaacaatcc gcattgccgc ttcatcttta cttgtttcgg ggaaagacaa ctccgcatca
     2221 tcatctatga taacaatttg gttggttgtc ttgcccatcg cgattgaaac atcattggca
     2281 actatcaccg gtattttttt cttaatacgt ttttcccgcg catatgccat tacattctcc
     2341 gtttcagcgg caaaaccgat gcagaacggc gggttcggca atgaggcaat agaagccaaa
     2401 gtatcggggt tctcatccaa ttcgatggat aacggtttgg catttttatc ttttttgaat
     2461 ttttgcgtac tcctgttttt aaccttatag tctgagacgg cggcaacaga aataaaagca
     2521 tcttgttttt caatcaaacg atgtactgcg cgatgcatat cttcggcact gacggcttga
     2581 accgtatcgg atatgccgaa aggcagcgtg gtttgaagct gtccgtgaat caggctgatt
     2641 tccgcaccgg cggcacggca cgcccgcgcc aaagctacgc ccatttttcc gctggaggta
     2701 tttgtgatgc ccctgacagg gtcaatggct tcaaatgtcg cacctgcggt aatcaagatt
     2761 ttcttgtccc ttaaaatttt cggtgtccac aagtctggaa gcaaatccag caattcggca
     2821 ggttccggca tccttcccat accattttct ctgcaagcct gttcgcccaa gcccggcata
     2881 tagacagtaa tgccgtctga aaccagttgt gcgatattcc gttggttggc aggattcagc
     2941 cacatttcca cattcatcgc gggagcgatg gcaagagggc atttccgtgc ggctgccaga
     3001 ttggtcagta ggttatctgc cacgccgtta cagatttttg ccacggtatt catacttgcc
     3061 ggcgcaatca gaaaaacatc cgcattccgg gtcaggttga tatgttccat accgtttgaa
     3121 ccgttgccgc cgtgcgtgtc ggtcagaacg ggattgccgc tcaaagcctg aaaagtcagc
     3181 ggagaaacaa attcagttgc cgagcggctc ataaccaccg taaccgaatg cccctgtttt
     3241 ttcagcagtc gcaccaactc gcaagactta tacgccgcaa tactgcccgt tacacctaaa
     3301 agaatatgtt tgcccatttt gacaatttct aattacgaag aaaaaacagc agccattcta
     3361 taacaaagta cggatacatt agttaccgtt tggatacgaa atgccgtctg aagccccgag
     3421 tttcaggcgg catattcaca aaggcgcatc agccggagga gaag
//
LOCUS       DAXFZM010000128         3150 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.129, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000128 DAXFZM010000000
VERSION     DAXFZM010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3150)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3150)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3150
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.129"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            117..665
                     /locus_tag="ACFJAG_002015"
     CDS             117..665
                     /locus_tag="ACFJAG_002015"
                     /inference="COORDINATES: protein motif:HMM:NF012372.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HFC3981221.1"
                     /translation="MNAKFIQADIFELQPETLEKELGLKKNDDDLILIGCSPCQYWSV
                     IQTDKRKSEKSKSLLLEFQRFVEYFNPGYVVVENVPGILSRMKESGLDNFIKLLEEKG
                     FTVHFGIHNTADYGIPQSRKRFTLIANRITKKSWNQSSIRANGLRYAMFWEWKTAFPK
                     LWQDIKTRRILCIVVRDYPISI"
     gene            662..1033
                     /locus_tag="ACFJAG_002016"
     CDS             662..1033
                     /locus_tag="ACFJAG_002016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HFC3981222.1"
                     /translation="MKRLALIPKNGGNRLAFAHIPELQLECFIGKDNSFKDTFGRLWW
                     DKPAPTITTKFFSISNGRFAHPEEDRALSLREGATLQSFPRNYVFKAGSRDKIARLIG
                     NAVPPMYAEKIGRAIVDNIEC"
     gene            1047..1904
                     /locus_tag="ACFJAG_002017"
     CDS             1047..1904
                     /locus_tag="ACFJAG_002017"
                     /inference="COORDINATES: protein motif:HMM:NF024977.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HFC3981223.1"
                     /translation="MSEEKLKMSFEPTVIEHLGVKMYSHTVPAIAELIANAYDACATE
                     VEVRLFDKPEHKIVIKDNGIGMSFDEINDFYLRIGRNRREEKQASPCGRIPTGKKGLG
                     KLALFRLGNKIEISTIQGNERVTFTLDYAEIKKSERIYQPEFQKESVKPNTENGTTIT
                     LTELTKKQGYPLDNYVGHLSRLFDFPAQDFKIKVSLNGSEPRIIDGNLKYNLVTPQFE
                     WEYQDLATNISSLSSKFEQYEYSGLIQGKFITTEKPLKNNMKGITLFANGRMVNMPEF
                     FTDSESSHF"
     gene            2094..2690
                     /locus_tag="ACFJAG_002018"
     CDS             2094..2690
                     /locus_tag="ACFJAG_002018"
                     /inference="COORDINATES: protein motif:HMM:NF021057.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02391 family protein"
                     /protein_id="HFC3981224.1"
                     /translation="MKGESGVDIENWKNKLPEKEREPVEVILNRLEDSELTNKEQAEV
                     ISALHSIIPEYPYYHWRHLHQDLHTACNDFYNEKKDYLSAAIEAVKVFEDKVQKQTGL
                     HSIDGRELIEKAFGSKKSMLLLTNNKTQAEQNLEDGLEQLACGTWTGFRNPVQHELRA
                     NLSPSIFNDKDALDLISLVSYLLRKVEQTKKRAKPTSP"
     gene            2696..3118
                     /locus_tag="ACFJAG_002019"
     CDS             2696..3118
                     /locus_tag="ACFJAG_002019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="very short patch repair endonuclease"
                     /protein_id="HFC3981225.1"
                     /translation="MTDIFTPSKRSFVMSKIHSKETKPEVLVRKFLFSQGFRYRKNDK
                     RYAGKPDIVLPKYKTVVFIHGCFWHGHSCNKGHIPKSNMDFWLEKITKNRERDIKNET
                     ELEKIGFKVIVVWECELKNKAICRERLNRLVEEIKDAV"
BASE COUNT         1089 a          514 c          698 g          849 t
ORIGIN      
        1 gtaagttaaa ggcggttgat tttttctgtg gcggaggcgg aatgagctat ggaatgtaat
       61 ccgctttagc cgggatagat tacgaactta gctgcaaaga aacatatgaa gccaatataa
      121 atgccaaatt tatacaggct gatatttttg aattgcagcc tgaaaccttg gaaaaagaac
      181 tcggcttaaa aaagaatgat gatgatttga ttcttatagg ttgtagtcct tgtcaatatt
      241 ggagtgttat tcaaacagac aaaagaaaat cggaaaaatc caagagtttg cttttggagt
      301 ttcagcggtt tgtagaatat ttcaatcccg gatatgttgt tgtagagaac gtaccgggaa
      361 ttctgagcag aatgaaagaa agcgggcttg ataatttcat aaagttattg gaagaaaaag
      421 gatttaccgt ccatttcggt attcacaata cggctgatta cggaattccc caaagccgta
      481 aaagatttac gttaattgca aacagaataa ccaaaaaaag ctggaaccag tcaagtattc
      541 gggcaaacgg cttacggtac gcgatgtttt gggaatggaa aacggctttc ccaaaattat
      601 ggcaggacat caagacgaga cggattttat gcatagttgt gcgggattat ccgatatcaa
      661 tttgaaacga ttggctttga tacctaaaaa cggaggaaac cgtttggctt ttgcgcatat
      721 tcccgaatta cagctggaat gttttatcgg aaaagacaat agttttaaag acacgttcgg
      781 taggctatgg tgggataagc ccgcacctac cataacgacc aaattcttta gcatttccaa
      841 cgggcggttt gcccatcctg aagaagatag ggcgttatcc ctgcgagaag gtgcaacatt
      901 gcaatcgttc cctcgtaact atgtctttaa agcgggcagt agggacaaga tagcccgttt
      961 gattggtaat gccgttcctc cgatgtatgc ggaaaaaata ggcagggcaa ttgttgataa
     1021 tatcgaatgt tagaaaagga gaaaacatgt ctgaagaaaa attgaaaatg agtttcgagc
     1081 caaccgtaat cgaacatttg ggtgtaaaga tgtattcgca cactgttcct gcgattgccg
     1141 agttgatagc gaatgcctac gatgcatgtg ctacggaagt ggaagttagg ttattcgata
     1201 aaccggagca taaaatcgtt attaaagata atggcatagg aatgagcttc gatgaaatca
     1261 atgattttta tttgagaatc ggtcggaaca gaagggaaga aaaacaagcc tccccgtgcg
     1321 gaagaattcc aacgggtaaa aaaggtcttg gtaaattggc attattcagg cttggcaaca
     1381 aaatcgaaat ctctactatc caaggaaacg aacgggttac ttttactttg gattatgcag
     1441 agattaaaaa aagtgagcgt atttatcaac cggagtttca gaaagagtct gttaaaccca
     1501 ataccgaaaa cggaacaact ataactttaa ccgagctgac gaaaaaacaa ggatacccgt
     1561 tagataatta tgtggggcat ctttcccgtt tatttgattt tccggctcag gattttaaaa
     1621 tcaaagtaag cttgaacggc tcggaaccaa gaatcattga cggaaaccta aaatataatc
     1681 ttgttacccc acaattcgaa tgggaatacc aggatctagc aaccaatatt tcatcgttat
     1741 cttcaaaatt cgaacagtat gaatacagcg gattaataca aggtaagttc attacaacgg
     1801 aaaaaccttt aaagaataat atgaaaggta ttaccttgtt tgccaacggc agaatggtaa
     1861 atatgcccga gtttttcact gatagcgaat ccagccattt ctaatcctat ctgacaggat
     1921 ggttaagtat tgattttata gataatgatg gtgaagattt aatcgctaca gataggacat
     1981 cattggattg gaagcatcct aaaacttcaa aattacgggt tttccttggg gaaatcgtct
     2041 gagccatcgg gcaagattgg agaaaaagaa gaaaaaaaga gaaagattac gaagtgaaag
     2101 gtgaaagcgg agttgatatc gaaaattgga aaaacaaatt gccagaaaag gaaagagaac
     2161 cggtagaagt tattttgaat cgtttggaag attcggagct tacaaataaa gaacaagcgg
     2221 aagtaatctc tgccttacat agtattattc cagaatatcc ttactatcat tggcggcatt
     2281 tgcatcagga tttgcatact gcctgtaacg atttttacaa tgaaaagaag gattatttaa
     2341 gtgctgcaat cgaggcagtt aaagttttcg aagataaggt tcagaagcag acaggtcttc
     2401 atagcataga cggaagagaa ttgattgaaa aagccttcgg gagtaaaaaa tctatgcttc
     2461 tattaacgaa taacaaaacg caggcggaac aaaatttaga agatggtctt gaacagcttg
     2521 catgcggaac atggactgga tttagaaatc ctgtgcaaca tgagttaaga gcaaatttat
     2581 ctcctagtat ttttaatgac aaggatgctt tggatttaat cagcttagtt tcatatttat
     2641 tgagaaaagt ggaacaaaca aaaaaacgag ctaaacctac atcgccttaa attttatgac
     2701 cgatattttc actccatcca aacgttcctt cgtgatgtca aaaatccata gcaaagaaac
     2761 caaaccggaa gtattggtaa ggaaatttct tttttcccaa ggtttccgtt atcggaaaaa
     2821 cgataagcgc tatgcaggca aaccggatat cgttttgcct aaatataaaa cagtcgtgtt
     2881 tatacacggc tgtttttggc acgggcattc ttgtaataaa ggacatatcc cgaaaagcaa
     2941 tatggatttt tggttggaaa aaatcacaaa aaatcgcgaa cgtgatatta aaaatgaaac
     3001 cgagctggaa aagattggtt tcaaagtgat tgtcgtttgg gagtgcgaat taaaaaataa
     3061 agctatttgt agggagcgat taaatcggtt ggtcgaggaa ataaaagatg ccgtctgaaa
     3121 aaatcagacg gcatcttcct ttaattaaga
//
LOCUS       DAXFZM010000129         3145 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.130, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000129 DAXFZM010000000
VERSION     DAXFZM010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3145)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3145)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3145
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.130"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..188)
                     /locus_tag="ACFJAG_002020"
     CDS             complement(<1..188)
                     /locus_tag="ACFJAG_002020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981226.1"
                     /translation="MFPPAEITGRGRVVLQQGFAGFGLYFHGVKFRRLNIPFKLPASC
                     RAVKYARMFAAVSADFGG"
     gene            313..996
                     /locus_tag="ACFJAG_002021"
     CDS             313..996
                     /locus_tag="ACFJAG_002021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2786 domain-containing protein"
                     /protein_id="HFC3981227.1"
                     /translation="MDKEKVLDKIKKCLALGRSANEHEAAQALRQAQALMEKYKVNAE
                     DIALSKVSEQKADRKMAFKLAGWQWGVANMIADIFGCKSYQRGKTMMFYGIGNRAETS
                     AYAFDVVYRQISADRRKFLKTCRAGKPSHRTYLADRFCGGWIASAWETVKKFEMSDEE
                     KAIMDGYKKKEYPDMAEARTRDAKSSILQGSKMEYEALTRGMESGKQVKLHYAVNGTG
                     FVKQIGGQT"
     gene            1191..1460
                     /locus_tag="ACFJAG_002022"
     CDS             1191..1460
                     /locus_tag="ACFJAG_002022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981228.1"
                     /translation="MESSDVQGRMETLAFATAPKKGGIRKSGFGRVILIKSGHIVIHN
                     ADGDSFATGYGVIAADIVSPDLKTDFDIFFPPESLLRYKKIGKKK"
     gene            complement(1816..3012)
                     /locus_tag="ACFJAG_002023"
     CDS             complement(1816..3012)
                     /locus_tag="ACFJAG_002023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HFC3981229.1"
                     /translation="MAKIITPLSANQVKNAKPRDKLYKLSDGGGLALWVYPTGRRSWK
                     LSFMQDGRQQTISLGRYPDFSLAEAREWREEVRRKRAHGENVVNKKVRADFAFEKVAR
                     DWFVRWSKGRSEKYAGQVMRNFERWVFPAIGNLDIRQVRTADVVGCLRVMEARGIVDT
                     LRKTKNSLKMVFAFAVGSGMMDINPVAQIGSGVFERVKTKNMTALSPSELPRLIDFLE
                     QRNEFAVYAGRVHIHPVTRFCIYWLLLTMTRIREAALMEWSELDGEVWRIPAERKKER
                     RGHDVPLSRAMRWVLDQARGLNVNGRFVFESVNFQGHINKESPRVAMRRSGLDTTAHG
                     LRSLARTYLREVLKVYNDVAEKLLAHSLGTRTQTAYNRSELWEERKDAPERWGNDVLR
                     LADNGK"
BASE COUNT          925 a          877 c          716 g          627 t
ORIGIN      
        1 ttgccgccaa agtccgccga tactgcggcg aacatccggg cgtatttgac ggcgcggcag
       61 gaagcaggca gcttgaacgg tatattaagc cgtctgaatt tcacgccgtg gaaatacagc
      121 ccgaagcctg caaagccttg ttgcaaaact accctgccgc ggccggtaat ctcggcaggc
      181 ggaaacaaaa aaagccccga gttcgtaagc gtatcagccc tagccgaatg gcccgaccga
      241 atcgaaagca aagcgaaaga cgaatgggca agggtgcgaa attaaaatac cggacaaatt
      301 aaagggttta atatggataa agagaaagtc ttagacaaaa tcaagaaatg tttggctttg
      361 ggtcggtcgg caaatgaaca tgaagccgca caggcgttaa ggcaggcgca ggctttaatg
      421 gaaaagtaca aagtaaatgc cgaggatatc gccttatcaa aagtctccga acagaaagcc
      481 gatcggaaaa tggcttttaa attggcaggc tggcaatggg gcgttgcaaa tatgattgcc
      541 gatatattcg ggtgcaaatc ttaccaacgc gggaaaacaa tgatgtttta cggcattgga
      601 aatcgagcgg aaacctcagc ctatgccttt gatgtagtct atcgtcagat ttccgccgac
      661 cgccgcaaat ttttgaaaac ctgccgggcg ggaaagccct cgcacagaac ttatcttgcc
      721 gaccgatttt gcggcggttg gattgcgagc gcttgggaaa cagtcaaaaa atttgagatg
      781 tcagatgaag aaaaagccat tatggacgga tacaaaaaga aagaatatcc ggatatggcc
      841 gaagcaagga caagagatgc gaaatcgtca atcctacaag ggtcaaaaat ggaatatgag
      901 gcattaaccc gaggaatgga atcgggtaag caagtgaagt tacactatgc cgtgaacggt
      961 acgggcttcg taaaacaaat cggagggcaa acatgaatcg agacggcggc ggatgcggaa
     1021 acttcggcgg attggggaaa ggatatgccg aatatgaaag acgcaattgc cgcatgccaa
     1081 gccgtaaaaa agcggaaacc cggacaaatc agaatcaacg gaaagaggat tgaagacatg
     1141 gaatacgaag tattcaataa acgcccgtca aaaaagcggt cggcgaagca atggagtctt
     1201 ccgacgtaca agggcggatg gaaacactgg catttgcaac cgccccgaaa aaaggcggaa
     1261 tccggaaatc cggattcggc cgcgttattc taatcaaaag cgggcatata gttattcata
     1321 acgctgatgg cgacagcttt gccaccggct acggcgtgat tgccgccgac atcgtcagtc
     1381 ccgatttgaa aacagacttt gacatattct tcccgccgga aagcttgttg cgatataaaa
     1441 aaatcgggaa gaagaaatag gcagacaaac gacagagccg taaaaacggc gcaagattaa
     1501 accgaacagg agagtaaaaa aatgaacatc accaaaccgg gcgcaaggat agaccgcccg
     1561 accatccgcg aactgattgc ctacgcaacc tgccgcaacc accccatttc aaactcgaca
     1621 ctgctgcgta tggaaaaaga cggacggata ccgtgccgtc tgaacctccc tcgcatcccc
     1681 cgtatgggac acccgcgaag ttttggaagc attagggttg cagcaataaa aaaacgcccg
     1741 attagggcgt tttcacataa tgcggaaaca gctttcttat ctacatttcc acataacgca
     1801 aaacacacaa aaaaatcatt ttccgttgtc ggcaagcctc aaaacatcat tcccccaccg
     1861 ttccggcgca tccttacgct cctcccaaag ctccgagcgg ttgtaagccg tttgcgtcct
     1921 cgtccccaac gaatgggcaa gcagcttttc cgccacatca ttatacacct tcagaacctc
     1981 gcgcaaataa gtacgcgcaa gcgagcgcaa accgtgcgcc gtcgtatcca gccccgaccg
     2041 ccgcatcgcc acgcgcggac tttccttatt gatatgccct tgaaaattca cactttcaaa
     2101 cacaaaccgc ccgttcacat tcagcccccg cgcctgatcc aacacccacc gcatcgcccg
     2161 cgacagcggc acatcatgcc cccgccgctc ctttttccgt tcggcgggga tacgccaaac
     2221 ctccccgtcc aactccgacc actccatcaa cgccgcctcc cgaatccgcg tcatcgtcaa
     2281 cagcagccaa tagatacaaa accgcgttac aggatggata tgcaccctgc ccgcataaac
     2341 cgcaaattca ttgcgctgct ccaaaaaatc aatcaggcgc ggcaattcgg acggactcaa
     2401 cgccgtcatg tttttggttt tcacccgttc aaacacaccc gaaccgattt gcgcgacagg
     2461 gttgatgtcc atcattcccg aaccgaccgc aaacgcaaac accatcttca gactgttttt
     2521 cgttttgcgc aacgtatcaa cgataccgcg cgcctccatc acacgcaggc agccgaccac
     2581 gtccgccgtc ctgacttgac ggatatcaag attgccgata gccggaaaaa cccaccgttc
     2641 aaaattccgc ataacctgtc cggcatactt ttcagaccgc cccttcgacc aacgcacaaa
     2701 ccaatcacgc gccaccttct caaaagcaaa atccgcccgc accttcttat tgacgacatt
     2761 ttccccgtgt gcccgttttc ggcgcacctc ctcccgccat tcccgcgcct cagccagcga
     2821 gaaatcagga taccgcccca gcgaaattgt ctgttgcctt ccgtcctgca taaacgacag
     2881 cttccaactc cgcctgcccg tcggatagac ccacaaagcc aaccctccgc cgtccgacaa
     2941 cttatacagc ttatcgcgcg gcttcgcatt tttaacctga tttgccgaca gcggcgtaat
     3001 gattttcgcc attatggtaa tttcccactt atccaaaaat taccatatac attaccataa
     3061 aaaaatgcaa taagaagatg ccgcaagatt gcaaatgatt taccttgatg cgttatgata
     3121 gggtaaaccg atgattttta tatag
//
LOCUS       DAXFZM010000130         3107 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.131, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000130 DAXFZM010000000
VERSION     DAXFZM010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3107)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3107)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3107
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.131"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            208..918
                     /locus_tag="ACFJAG_002024"
     CDS             208..918
                     /locus_tag="ACFJAG_002024"
                     /EC_number="3.1.3.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008967 - phosphoglycolate phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycolate phosphatase"
                     /protein_id="HFC3981230.1"
                     /translation="MNAAIEHVQAVAFDLDGTLCDSVPDLAAAAEAMLEQLGMKPLPA
                     KVVESYVGDGIGKLVHRVLTNDRDREADSELWEKGFVSYMKYYRDHLSVFTRPYPETE
                     AGLALLKSLGIPLVIITNKNEILAAELLKQLGLADYFSLILGGDSLPEKKPSPLPLRH
                     AAEVLGIDAANMLMVGDSRNDIIAAKAAGCLSVGVTFGYGDMTLLSQDDTTRPDRIIG
                     ALPEIYENLQPQKNKDEE"
     gene            991..1452
                     /gene="recX"
                     /locus_tag="ACFJAG_002025"
     CDS             991..1452
                     /gene="recX"
                     /locus_tag="ACFJAG_002025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombination regulator RecX"
                     /protein_id="HFC3981231.1"
                     /translation="MKPQKSLRARAMDILSRQEVSRIGLKRKLAPHAESEEELENVLN
                     EFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQQGIDEKTSRNLLPDRSSEKQAA
                     IAVLRKKFKHPAANLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDSC"
     gene            1526..1687
                     /locus_tag="ACFJAG_002026"
     CDS             1526..1687
                     /locus_tag="ACFJAG_002026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981232.1"
                     /translation="MSEQPEKHHASPIEDERKNPVYRMGRAVAGFMLAVWAGVLALVF
                     FLVFRFWLS"
     gene            1840..2322
                     /locus_tag="ACFJAG_002027"
     CDS             1840..2322
                     /locus_tag="ACFJAG_002027"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - fatty acyl-CoA hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HFC3981233.1"
                     /translation="MTQQRQLPSHELIMSELMMPDTANFSGNVHGGELLLLLDQVAYS
                     CASRYSGNYCVTLSVDKVLFKEPIHIGDLVTFYAAVNYTGRTSMEIGIRVEAQNIRTG
                     EIRHTNSCYFTMVAVKDGKPVPVPPLEILTDRQRCRYEKAKKRREISLQASGDVSCGC
                     "
     gene            complement(2720..>3107)
                     /locus_tag="ACFJAG_002028"
     CDS             complement(2720..>3107)
                     /locus_tag="ACFJAG_002028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010791153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HFC3981234.1"
                     /translation="SPSGTRSVGGIVWQRPTQGKVVADFGGGNKGVDIAGNAGQPVLA
                     AADGKVVYAGSGLREYGNLVIIQHNSSFLTAYGHNQKLLVGEGQQVKRGQQVALMGNT
                     DASRTQLHFEVRQNGKPVNPNSYIAF"
BASE COUNT          823 a          928 c          696 g          660 t
ORIGIN      
        1 tccaattaaa taaagatata gtcatcattt tattttttaa aaatttaatt ggaacatcgc
       61 cgggatttca aacccttgcc agaccccgcc ataaaatccg aaaacaccgc ccgaaaaacc
      121 tgttgcgatt gttaataatc tatacattag aagccctgtg caaacgatgt taaaataaac
      181 cctttcaacc cgacaggaaa ccggattatg aatgcagcca tcgaacacgt ccaagccgtc
      241 gccttcgatt tggacggcac actgtgcgat tccgtccccg accttgccgc cgccgcagaa
      301 gcgatgttgg aacaactcgg tatgaaaccg ctgcccgcca aagtggtcga aagctacgtc
      361 ggcgacggca tcggcaaact ggttcaccgc gtcctcacca acgaccgcga ccgcgaagcc
      421 gattccgaac tgtgggaaaa aggtttcgtg tcctatatga aatactaccg cgaccatttg
      481 agcgtcttca cccgccccta tcccgaaacc gaagccgggc tggcattgct caaatccttg
      541 ggcattccgc tggtaatcat taccaacaaa aacgaaatcc ttgccgccga gcttctaaaa
      601 caactgggac tcgccgacta cttcagcctg atactcggcg gagacagcct gcccgaaaaa
      661 aaacccagcc cgctgccgct gcggcacgcc gccgaagttt tgggtatcga tgccgccaat
      721 atgcttatgg tcggcgactc gcgcaacgac atcatcgccg ccaaagccgc cggctgcctg
      781 agtgtcggcg ttaccttcgg ttacggcgat atgacgctgc tctcgcaaga cgatacgacc
      841 cgccccgacc ggattatcgg cgcgctgccc gaaatttacg aaaacctgca accgcagaaa
      901 aacaaagacg aagaataaaa caatctgttc agacggcatc ggaatccgtt tcccataccg
      961 tctgaatctt tccgtgccga aaccgccgcc atgaaaccgc aaaaatccct acgcgcccgc
     1021 gcgatggaca tcctctcgcg ccaagaagtc agccgcatcg gtctgaaacg caaacttgca
     1081 ccgcacgccg aaagcgaaga ggagttggaa aacgtgttaa acgaatttgc cgaacgcaac
     1141 tggcagtcgg atttgcgcta cgccgaagcc tatatccgca gcaaaagccg caaacacggt
     1201 tcattgaggc tgaaacaggc tttggcgcaa cagggcatag atgaaaaaac cagccgcaac
     1261 ctgcttcccg accgctcaag cgaaaagcaa gccgccatag ccgtgttgcg taaaaaattc
     1321 aaacatcccg ccgccaacct caaagaaaaa caaaaacagg cgcgtttcct cgcctatcgc
     1381 ggttttgatg ccgataccgt tcagacggca ttgaaacacg cttgggacga aaattgggaa
     1441 gacagctgct gaccttcctt cttaaatctt tttgcgcggc agcgtaacct tacgcccgtt
     1501 tccaactttt ccgattgaga acaaaatgtc cgaacaaccc gaaaaacacc acgcctcccc
     1561 catcgaagac gaacgcaaaa acccggttta ccgtatggga cgggcggttg ccggattcat
     1621 gctcgccgtt tgggcgggcg tgctggcact cgtgtttttc ttggttttcc gtttttggct
     1681 ttcctgaaca aaatgccgtc tgaaggcttc agacggcatc ggcggcccat ttcggcagac
     1741 tatccctcca tagctttttt tagcttgaat tccacttccc cattccctaa aattttcccg
     1801 cacccatttc aaaacaccct ttcttaaaac aggtacacca tgacacaaca acgccaactg
     1861 ccttcccacg aactcattat gtccgaactg atgatgccgg acaccgccaa tttcagcggc
     1921 aacgtacacg gcggcgaact cctgctcctg ctcgaccagg ttgcctattc ctgcgccagc
     1981 cgttacagcg gcaattattg cgttaccctt tcggttgaca aagtcctgtt taaagaaccc
     2041 atccacatcg gcgatttggt taccttttac gccgctgtca actacacggg acgcacctcg
     2101 atggaaatcg gcatccgtgt cgaagcacaa aacatccgca ccggcgaaat ccgccatacc
     2161 aacagctgct acttcacgat ggttgcggtc aaagacggca aacccgtccc cgtccctccg
     2221 ctggaaatcc tgaccgaccg ccaacgctgc cgctacgaaa aagccaaaaa acgcagagaa
     2281 atcagcctcc aagcctccgg agacgtgtcc tgcggctgct gacggcggcc tatgccgtct
     2341 gaaagacagg acaagcattg ttccgacatt cggtgtaatg gtttgattta ttgaagtaaa
     2401 atcggctgat tctggctcat ccgtttttca acgccatttt ggaacacagc cgtgagacta
     2461 agcggttgtg ttttcatatt cccttgatgc agccctaatc agtcggacaa aatgcctttt
     2521 atccgataaa accgccctcc gaacggaaat aagcggcttt tccattgcaa acggatgaaa
     2581 tcaagcaaat acccaaacac agtcaaacaa atttatacgc cccgtccctt cggaatgatt
     2641 tgaaaacaca gccgccaaaa caaaaatgcc gtctgaagac ctttcagacg gcatttttaa
     2701 cctgattgca aacggaaagt cagaacgcga tatagctgtt cgggttaacc ggtttgccgt
     2761 tttgacgcac ctcgaaatga agctgcgttc tggaagcatc ggtattgccc atcaaagcaa
     2821 cctgctgacc gcgtttgacc tgctgacctt cgccgaccag caatttttgg ttgtgcccgt
     2881 acgcggtcag gaaagaggaa ttgtgctgga tgatgaccaa gtttccgtat tccctcaaac
     2941 ctgaaccggc ataaaccact ttgccgtcag ccgccgccaa aacgggttgt ccggcattgc
     3001 cggcaatatc gacacccttg ttgccgccgc cgaaatcggc aaccacttta ccttgggtcg
     3061 gacgctgcca aacaatgccg ccgaccgaac gcgtgccgga aggcgaa
//
LOCUS       DAXFZM010000131         3092 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.132, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000131 DAXFZM010000000
VERSION     DAXFZM010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3092)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3092)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3092
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.132"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..2998
                     /gene="pilC"
                     /locus_tag="ACFJAG_002029"
     CDS             <1..2998
                     /gene="pilC"
                     /locus_tag="ACFJAG_002029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PilC family type IV pilus tip adhesin"
                     /protein_id="HFC3981235.1"
                     /translation="QAQARDYAIVMNGQNQPEVKSNVPSSIRDKDRKREYTHHGYNTG
                     GGSVSFDNSDELVSQQSGTAVFGTATYLPPYGKVSGFDTDSLKGRANAAGWIRTTRIA
                     LAGYSYADVVCRDITGCPKLVYETKFAFGQQGLQRKGSKLDIYEDKSRDNSPIYKLKD
                     HPWLGVSFNLGSENTVKNSKSLNKLISSFSEGNNNQNIVSTTRDHPISLGDSQREHTA
                     VAYYLNAKLHLLDKKGIEDIAQGKIVDLGILKPHVETTGRSFLNFWAKWDIKDNGQIP
                     VKLGLPTVKAGRCINKPNPNPKSALSPALTAPALWFGPAQNGKVQMYSASVSTYPDSS
                     SSKIFLQNLSRNDDKNKPGRYSLKSLNDGEIQSRQPSFNGRQTIIRLDDGVHLIKLNG
                     SKDEVAAFVNLNGNNTGKNDTFGIVKEANVNLDADEWKKVLLPWTVRGPGNDDKFKSI
                     NRESDKYSQRYRIRENGNRDLGDIVNSPIVAVGGYLATAANDGMVHIFKKNGGSDERS
                     YNLKLSYIPGTMPRQYFDNDTSALKGSTLAQELRTFAEKGYVGDRYGVDGGFVLRQVE
                     DRVFMFGAMGFGGRGAYALDLSKINGNYPAAAPLFDVKDGDNNGKNRVKVKLGYTVGT
                     PQIGKTQNGKYAAFLASGYAAKDINSNDNKTALYVYDLNNTLGTPIAKIEVKDGKGGL
                     SSPTLVDKNLDGTVDIAYAGDRGGNMYRFDLSDSNPSKWSVRTIFEGTKPITSAPAVS
                     RLADKRVVIFGTGSDLSEQDVLDTKEQYIYGIFDDDTANVSVKVKDHMGGGLLEQVLS
                     EENKTLFLSNNKASGGSTDKGWVVKLKEGQRVTVKPTVVLRTAFVTIRKYKDDGCGAQ
                     TAILGINTADGGALTPRSARPIVPEANKDVAQYSGHKTAGGKSVPIGCMWKNSKTVCP
                     NGYVYDKPVNVRYLDETETDGFSTTADGDAGGSGIDPAGRRPGKNNRCFSKKGVRTLL
                     MNDLDSLDITGPMCGIKRLSWREVFF"
BASE COUNT          850 a          801 c          803 g          638 t
ORIGIN      
        1 gcaggcgcaa gcccgtgact acgctattgt catgaacggg caaaaccagc ccgaggtaaa
       61 gtcgaatgtg ccatcttcaa taagggacaa agacaggaag cgcgaatata ctcatcatgg
      121 gtacaacaca ggaggaggct ctgtctcatt cgacaatagc gatgagcttg tttctcaaca
      181 aagcggtact gccgtttttg gcacagccac ctacctgccg ccctacggca aggtttccgg
      241 ttttgatacc gatagtctga aagggcgcgc caatgccgcc ggttggattc gtaccacccg
      301 catcgcgctg gcaggctaca gctacgccga tgtcgtatgc agagacatca caggctgtcc
      361 caaacttgtc tatgagacca aatttgcctt cggtcaacaa gggttgcaaa gaaagggcag
      421 caagctggat atatacgaag acaaaagccg cgacaattcg cccatttaca aattgaagga
      481 tcatccctgg ttgggcgtgt ctttcaattt gggcagcgag aataccgtca aaaatagcaa
      541 atcactcaac aaattgatat cttcttttag tgaaggcaat aataatcaaa acatcgtctc
      601 tacgacacga gaccacccta tttcccttgg cgactcgcag cgcgaacata ccgccgtggc
      661 ctattatctg aacgccaaac tgcacctgct ggacaaaaaa gggattgaag atatcgccca
      721 aggcaaaata gtggatttgg gtatcttgaa accgcacgtc gagacgacag gacgaagctt
      781 tctaaatttt tgggctaagt gggacattaa agataacggg cagattccgg tcaagctcgg
      841 cctgccgaca gtcaaagcag gccgctgcat caacaaaccg aaccccaatc ccaaatcagc
      901 cctttcgccg gcactgaccg cccccgcgct gtggttcggc cctgcgcaaa atggcaaggt
      961 gcagatgtat tccgcttcgg tttctaccta ccccgacagt tcgagcagca aaattttcct
     1021 gcaaaacctt tcccgcaatg atgacaaaaa caaaccgggc cgctattccc tcaaatcttt
     1081 gaatgatggt gagattcaaa gtcgacagcc gagtttcaac gggcggcaaa caatcatccg
     1141 attggatgac ggcgtacatt tgatcaaact gaatggaagc aaggatgagg tcgccgcttt
     1201 tgtcaattta aatggaaaca acaccggcaa aaacgacact ttcggcattg ttaaggaagc
     1261 gaacgtcaat cttgacgccg acgagtggaa aaaagtgctg ctgccttgga cggttcgggg
     1321 tcccggtaat gacgataaat ttaaatcaat taaccgagaa tcagacaaat acagccaaag
     1381 ataccgcatc cgcgaaaacg gcaatcgcga tttgggcgac atcgtcaaca gccccatcgt
     1441 ggcggtcggc gggtatttgg caaccgccgc gaacgacggg atggtgcata tcttcaaaaa
     1501 aaacggcggc agtgatgaac gcagctacaa tctgaagctc agctacatcc ccggcacgat
     1561 gccgcgccaa tattttgata acgacacttc cgctctcaaa ggctccaccc tcgcccaaga
     1621 gctgcgcacc tttgccgaaa aaggctatgt gggcgaccgc tacggcgtgg acggcggctt
     1681 tgtcttgcgt caagttgaag accgcgtgtt tatgttcggc gcgatgggtt ttggcggcag
     1741 aggcgcgtat gccttggatt taagcaaaat caacggaaat tatccggccg ccgctcccct
     1801 gtttgatgtc aaagatggcg ataataacgg caaaaatcgc gtgaaagtga aattaggcta
     1861 caccgtcggt acgccgcaaa tcggcaaaac ccaaaacggc aaatacgccg ccttcctcgc
     1921 ctccggttat gcggctaaag acattaacag caacgacaat aaaaccgcgc tgtatgtata
     1981 tgatttgaac aacaccttag gtacgccgat tgcaaaaatc gaagtgaagg acggcaaagg
     2041 cgggctttcg tcccccacgc tggtggataa aaatttggac ggcacggtcg atatcgccta
     2101 tgccggcgac cggggcggca atatgtaccg ctttgatttg agcgattcca atcctagtaa
     2161 atggtctgta aggactattt tcgaaggcac aaaaccgatt acctccgcgc ccgccgtttc
     2221 ccgactggca gacaaacgcg tcgtcatctt cggtacgggc agcgatttga gtgaacagga
     2281 tgtactcgat acgaaagaac aatatattta cggtatcttt gacgacgata cggcgaatgt
     2341 tagtgtaaag gtaaaagacc acatgggcgg cgggctgctc gagcaagtgc ttagcgagga
     2401 aaataaaacc ttattcctga gcaataataa ggcatccggc ggatcgaccg ataaaggctg
     2461 ggtagtgaaa ttgaaggaag gacagcgcgt taccgtcaaa ccgaccgtgg tattgcgtac
     2521 cgccttcgtg accatccgca aatataaaga cgacggctgc ggcgcgcaaa ccgccatttt
     2581 gggcatcaat accgccgacg gcggcgcatt gactccgaga agcgcgcgcc cgattgtgcc
     2641 ggaagccaat aaggatgtcg cacaatattc cggccataag acagccggcg gcaagtccgt
     2701 ccccataggc tgcatgtgga aaaacagcaa aaccgtctgc ccgaacggat atgtttacga
     2761 caagccggtt aatgtgcgtt atctggatga aacggaaaca gacggatttt caacgacggc
     2821 ggacggcgat gcgggcggca gcggtataga ccccgccggc aggcgtcccg gcaaaaacaa
     2881 ccgctgcttc tccaaaaaag gggtgcgcac cctgctgatg aacgatttgg acagcttgga
     2941 tattaccggt ccgatgtgcg gtatcaaacg cttaagctgg cgcgaagtct tcttctgacc
     3001 cgcctgcgcg gccggttttt ccgcaaatgc cgtccgaaag gccttcggac ggcatttttt
     3061 tgcgtttttc gggagggggc ggcaaatgaa ac
//
LOCUS       DAXFZM010000132         3007 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.133, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000132 DAXFZM010000000
VERSION     DAXFZM010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3007)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3007)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3007
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.133"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(88..1077)
                     /locus_tag="ACFJAG_002030"
     CDS             complement(88..1077)
                     /locus_tag="ACFJAG_002030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HFC3981236.1"
                     /translation="MATITQRNGKWRVQIRMKGVSRSATFERASDAKAWAARIESQIM
                     DGIQGNAPRNTIFADLIRRYLSEVTPSKRGAREESYRIGRALKTPLAKVRLADLRPQD
                     FADWRDQRLQEVSPTSVGRELTTLSAVCEHAMKEWGLLRENPVRKISKPKKSRARTRR
                     PTEQEIADICAALLYRPNEKPKMAVQRVAVAVLFAIETAMRAGEICGLKWADVNMRRR
                     IAHLPITKNGDSRDVPLSLRAAELIEQLRGIDDTWVFSLDAKSLDVLFRRARDNCGIQ
                     GLHFHDTRREALTRLSKKVPVEVLAKISGHRDLRILLNVYYRPDMADIAKMLD"
     gene            complement(1337..1525)
                     /locus_tag="ACFJAG_002031"
     CDS             complement(1337..1525)
                     /locus_tag="ACFJAG_002031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981237.1"
                     /translation="MADGRKGFFDAIIKINIFFFPVKTPTLGAANPIAGGSTRFRFGA
                     EQMAVLYVPFCVLKHIGR"
     gene            1766..2800
                     /gene="purM"
                     /locus_tag="ACFJAG_002032"
     CDS             1766..2800
                     /gene="purM"
                     /locus_tag="ACFJAG_002032"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004641 -
                     phosphoribosylformylglycinamidine cyclo-ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HFC3981238.1"
                     /translation="MSTSLSYRDAGVGIDAGDQLVEKIKPFAKRTMRPEVLGDLGGFG
                     ALVEIGKKYQNPVLVSGTDGVGTKLKLAFDWDKHDTVGIDLVAMSVNDILVQGAEPLF
                     FLDYFACGKLDVPRATDVIKGIAQGCEESGCALIGGETAEMPGMYPVGEYDLAGFAVG
                     VVEKENVITGRGIGAGDVVLGLASNGAHSNGYSLIRKIIERDNPDLDAEFDNGKTLRE
                     AVIAPTRLYVKPILAALEKFTIKGMAHITGGGITENVPRVLPKNTVAQIDAESWELPK
                     LFQWLQKAGNVETQEMYRTFNCGIGMVVIVAAEDADAVRSFLSGQGETVYRLGCIRER
                     QGNEHQTQVA"
BASE COUNT          748 a          707 c          764 g          788 t
ORIGIN      
        1 tttaatgaac ctttgaaacc gaagataatt aattttcctc tttattttca atacgcagtg
       61 tgccctatgt ttttaaataa aaatatttta atccaacatt tttgcaatat ccgccatgtc
      121 ggggcggtag taaacattga gtaaaatcct taaatcccga tgcccgctga tttttgccaa
      181 gacctccaca ggcacttttt ttgataggcg cgtgagggct tcgcggcggg tgtcgtgaaa
      241 atgcaggcct tgtatgccgc aattatcccg cgctcgcctg aataatacat caaggctttt
      301 ggcatccagg ctaaacaccc atgtgtcatc aattccgcgc agttgctcta ttagttcggc
      361 ggctcgcaag gataatggca cgtcacggct gtcgccgttt ttagttattg ggaggtgggc
      421 aatacgacgc cgcatattca catctgccca ttttaggccg cagatttcgc ctgcccgcat
      481 ggcggtttcg atggcaaata ggacggcaac ggcaacccgt tgcaccgcca ttttcggttt
      541 ctcattaggc cggtatagga gggcggcgca aatatcggca atttcctgct cggttggccg
      601 tcttgtcctt gcccggcttt ttttcggctt gctgattttg cgtacagggt tttcgcgaag
      661 aagtccccac tctttcatgg cgtgttcgca gacggcggat aaagtggtta attcgcgtcc
      721 gacgctggtg ggggatacct cctgcaaccg ttgatctcgc caatcggcga agtcttgagg
      781 tcgcaggtcg gcaagccgca cctttgccaa aggtgttttt agtgcgcgtc caatgcggta
      841 tgattcttcc cgtgcgcccc gctttgatgg tgtaacctcg gataaatacc gccggataag
      901 gtcggcaaag atagtatttc gcggggcatt gccttggatg ccgtccataa tttgcgactc
      961 tattcgcgcc gcccacgcct tcgcgtctga tgcccgctca aatgtggcgg aacgggaaac
     1021 gcctttcata cggatttgta cgcgccattt gccgttacgt tgagtgatgg ttgccatatt
     1081 tattcgggtg caattcgggt gcaaatataa tagagcaaaa cagatataaa gcggggcaaa
     1141 atagggctat attaaattta atgctttgat atgtagggat aaatagattt aaaaagacga
     1201 aagaagtgcg gacgtagaat aagcgtagat gcgctccgtc cgcaccaata aaaatatata
     1261 aatcatattg ttaatgatta ttgggacaat tcggtggcac aaaatataag ctgtctgctt
     1321 ttcagcgggc ggctttttat ctgcctatgt gtttcaacac acaaaacggc acataaagca
     1381 ccgccatttg ttccgcaccg aatcggaagc gggtgcttcc gcccgcaatc ggattcgccg
     1441 cccctaatgt cggggtttta accggaaaga agaaaatatt gattttgatg atggcatcaa
     1501 aaaaaccctt ccgcccgtct gccaaaagga atggttaaga aaagcaatgc gtcttttgat
     1561 ggaacgcgat atataagaaa ttgaggggaa gggcaggcgg gtttctgccc gttaatcctg
     1621 cggacggccc cgccaaaccc gacacgcgcg ggcatatggc ggattgttta caatattgtc
     1681 taaaaatctg aacctgcaaa cgcgaaataa ggtagaatac gccccgttat tttaccgtcc
     1741 aatccccatt taccaaggaa aaacgatgag tacttcattg agttaccgcg atgcgggcgt
     1801 cggtatcgac gcaggcgacc aactggtcga aaaaatcaaa ccgtttgcca aacgcaccat
     1861 gcgtccggaa gtattggggg atttgggcgg ttttggcgca ttggtcgaaa tcggcaaaaa
     1921 atatcaaaac cccgtattgg tcagcggtac ggacggcgtg ggtaccaagc tcaaacttgc
     1981 cttcgattgg gacaaacacg atacggtggg catcgacctt gttgcaatga gtgtcaacga
     2041 tattttggtt caaggagctg aaccattgtt tttcttggat tattttgcct gcggtaaatt
     2101 ggatgttccg cgtgcgaccg atgtcatcaa aggcattgcc caaggttgcg aagaatccgg
     2161 ctgcgccctg attggcgggg aaactgccga aatgccgggt atgtatcccg ttggtgaata
     2221 cgatttggcg ggttttgccg tcggcgtggt ggaaaaagag aatgtcatta ccggccgcgg
     2281 catcggcgcg ggcgatgtgg tattgggttt ggcttccaac ggcgcacatt caaacggcta
     2341 ttcccttatc cgtaaaatca tcgaacgcga caatcccgat ctggatgccg agtttgataa
     2401 tggcaaaact ttacgtgaag ccgttattgc gccgacacgt ctgtatgtga aaccgattct
     2461 tgccgctttg gaaaaattta ccattaaagg tatggcgcac attaccggcg gcggcattac
     2521 cgaaaacgtg ccgcgcgtgt tgcctaaaaa cacggttgcc caaatcgatg ccgaatcgtg
     2581 ggaattgccc aagctcttcc aatggcttca aaaggcgggc aatgtggaaa cccaagaaat
     2641 gtaccggacc tttaactgcg gcatcggtat ggtcgtcatc gttgctgccg aagatgccga
     2701 tgcggttcgg tcattcctga gcgggcaggg cgagacagtg taccgtttgg gttgcatccg
     2761 agagcgtcaa gggaacgagc atcaaaccca agttgcctga cttccaagca tcaaatgccg
     2821 tctgaatttg tttcagacgg catttccgca tcttccaaac gcgtatccgc aacacagttc
     2881 tgcaaactga tattttgccc ggtatggcgg cttaaacttc ttcatcatat ttcgataatg
     2941 ctataaaatg atataatcat aaaatattgt ttattcctac atcgtattca tcctattttc
     3001 cgaaatg
//
LOCUS       DAXFZM010000133         2994 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.134, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000133 DAXFZM010000000
VERSION     DAXFZM010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2994)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2994)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2994
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.134"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            576..1373
                     /gene="truA"
                     /locus_tag="ACFJAG_002033"
     CDS             576..1373
                     /gene="truA"
                     /locus_tag="ACFJAG_002033"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HFC3981239.1"
                     /translation="MDTAQKQRWAITLSYDGSRFYGWQKQAGGVPTVQAALETALARI
                     AGESVATTVAGRTDTGVHAAAQVVHFDITAARPQQAWVRGVNAHLPEGIAVLHARQVA
                     PGFHARFDAYGRHYRYLLESAPVRSPLLKNRAGWTHLKLDIEPMRRAAALLIGEQDFS
                     SFRAAGCQAKSPVKTIYRTDLTQSAGLIRLDLHGNAFLHHMVRNIMGALVYVGSGRLS
                     VEGFAALIQERSRLKAPPTFMPDGLYLTGVDYPGAYGIVRPQIPEWL"
     gene            1890..2936
                     /gene="porB"
                     /locus_tag="ACFJAG_002034"
     CDS             1890..2936
                     /gene="porB"
                     /locus_tag="ACFJAG_002034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimeric porin PorB.IB"
                     /protein_id="HFC3981240.1"
                     /translation="MKKSLIALTLAALPVAATADVTLYGTIKAGVQTYRSVEHTKGKV
                     SKVETGSEIADFGSKIGFKGQEDLGNGLKAVWQLEQGASVAGTNTGWGNKQSFVGLKG
                     GFGTIRAGSLNSPLKNTGANVNAWESGKFTGNVLEISGMAQREHRYLSVRYDSPEFAG
                     FSGSVQYAPKDNSGSNGESYHVGLNYQNSGFFAQYAGLFQRYGEGTKKIEYDNQTYSV
                     PSLFVEKLQVHRLVGGYDNNALYVSVAAQQQDAKLYGTWRANSHNSQTEVAATAAYRF
                     GNLTPRVSYAHGFKGSAHSADYDNTYDQVVVGAEYDFSKRTSALVSAGWLQEGKGADK
                     IVSTASAVVLRHKF"
BASE COUNT          749 a          911 c          722 g          612 t
ORIGIN      
        1 tgcgtaatgg tatcgggtac tcatcatcaa cctgccttgc attcggttgt gttgtccggc
       61 aactgtccgg ttgtgccgat gggttgccct gccgctccct gagctacgca acggttgtct
      121 gccttgggcg ggcgcgggtg gcggccgggc ggtttgtcgc tatgatacgg aagttccgat
      181 atacaagggc gggcttcagc ccgccaaatc caccaactcc gccgaatccg ccgattcccg
      241 ccgccgtcat tcccgcataa gcgggaatcc agacccgtcg gcacgggaac ctgcatcccg
      301 tcattcccac aaaagtggga atccggaacg aaaaatctca agaaaccgtt ttacccgata
      361 agtttccgca ctgacagacc tagattcccg cctgcgcggg aatgacggtt cgggcactcc
      421 tgacagggtg aattcacagg atagcgattc gtagcaactg catccaaccc cccgaacaac
      481 tccccaaaca acgccgcgcg ccccgggcgt ttgccgtttc cctgcaaaat ctgcgataca
      541 atgcagtctg aacatttatc cgaatcccaa acccgatgga taccgcacaa aaacaacgct
      601 gggcaataac cctatcctac gacggcagcc gcttttacgg ctggcagaaa caggcgggcg
      661 gcgtaccgac cgttcaggcg gcattggaaa ccgcactcgc ccgaatcgca ggagaatctg
      721 tcgccaccac agttgccggc aggaccgaca ccggcgtgca cgctgccgcc caagtcgtcc
      781 actttgacat aactgccgcc cgtccccaac aggcatgggt gcgcggcgta aatgcccacc
      841 tgcccgaagg cattgccgtt ttgcacgccc gacaggtcgc acccggattt cacgcccgct
      901 tcgacgcata cggacggcac taccgctacc tgctcgaatc cgcccccgtc cgttcccccc
      961 tgctcaaaaa cagggcgggc tggacacacc tcaaactcga catcgaaccg atgcgccggg
     1021 ctgccgcctt attgatcggc gaacaagact tctccagctt ccgcgccgcc gggtgccagg
     1081 caaaatcccc cgtcaaaacc atctaccgca ccgaccttac ccaaagcgca ggactgatcc
     1141 gcctcgattt gcacggcaac gcctttttgc accatatggt acgcaacatc atgggcgcgc
     1201 tcgtttatgt cggcagcggc aggctcagcg tcgaaggctt cgccgcactg attcaagaac
     1261 gcagccgcct caaagcccca ccgaccttca tgcccgacgg gctttacctg accggcgtcg
     1321 actatcccgg ggcatacggc atcgtccgcc cccaaatccc cgaatggctt taaaacattc
     1381 ttgtcgcgga gattttgaaa tcggacaaac tgtcaggcaa tctttttcaa tgttgacact
     1441 atagtggatt aacaaaaatc aggacaaggc ggcgggccgc agacagtaca aatggtacgg
     1501 aaccggttcg cccggtgctt gggcgcctta gggaaccgtt ccctttgggc cggggcgggg
     1561 caacgccgta ccggtttttg ttaatccgct ataacccccg gtttgcaatg ccctccaata
     1621 ccctcccgag taagtgttgt aaaaatgcaa atcttaaaaa tttaaaataa ccatatgtta
     1681 caaaacaaaa aatacccgta atatttctat ccgcccttca aaatgcacat cggattccac
     1741 acaaaaacag gcagaagttt gttttttcag acaggaacat ctatagtttc agacatgtaa
     1801 tcgccgagcc cctcggcggt aaatgcaaag ctaagcggct tggaaagccc ggcctgctta
     1861 aatttcttaa ccaaaaaagg aatacagcaa tgaaaaaatc cctgattgcc ctgactttgg
     1921 cagcccttcc tgttgcggca acggccgatg tcaccctgta cggcaccatc aaagccggcg
     1981 tacaaactta ccgttctgta gaacatacaa aaggcaaggt aagtaaagtg gaaaccggca
     2041 gcgaaatcgc cgacttcggt tcaaaaatcg gcttcaaagg ccaagaagac ctcggcaacg
     2101 gcctgaaggc cgtttggcag ttggaacaag gtgcctccgt cgccggcact aacaccggct
     2161 ggggcaacaa acaatccttc gtcggcttga agggcggctt cggtaccatc cgcgccggta
     2221 gcctgaacag ccccctgaaa aacaccggcg ccaacgtcaa tgcttgggaa tccggcaaat
     2281 ttaccggcaa tgtgctggaa atcagcggaa tggcccaacg ggaacaccgc tacctgtccg
     2341 tacgctacga ttctcccgaa tttgccggct tcagcggcag cgtacaatac gcacctaaag
     2401 acaattcagg ctcaaacggc gaatcttacc acgttggctt gaactaccaa aacagcggct
     2461 tcttcgcaca atacgccggc ttgttccaaa gatacggcga aggcactaaa aaaatcgaat
     2521 acgataatca aacttatagt gtgcccagtc tgtttgttga aaaactgcaa gttcaccgtt
     2581 tggtcggcgg ttacgacaat aatgccctgt acgtttccgt agccgcacaa caacaagatg
     2641 ccaaattgta tggaacatgg cgtgctaatt cgcacaactc tcaaaccgaa gttgctgcta
     2701 ccgcggcata ccgtttcggc aacttaacgc cccgcgtttc ttacgcccac ggcttcaaag
     2761 gctctgctca tagtgcagac tacgacaata cttatgacca agtggttgtc ggtgcggaat
     2821 acgacttctc caaacgcact tctgccttgg tttctgccgg ctggttgcaa gaaggcaaag
     2881 gcgcagacaa aatcgtatcg actgccagcg ccgtcgttct gcgccacaaa ttctaatctg
     2941 caaagattgg tatcaacaaa aagcctgtcg ccagacaggc ttttttctgt tttc
//
LOCUS       DAXFZM010000134         2870 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.135, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000134 DAXFZM010000000
VERSION     DAXFZM010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2870)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2870)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2870
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.135"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            249..677
                     /locus_tag="ACFJAG_002035"
     CDS             249..677
                     /locus_tag="ACFJAG_002035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981241.1"
                     /translation="MAKPLGGVNAAILFGHFFYWNDKTQYESGIYRTAEEIEIETGLS
                     VQEQRTARAKLRERGVLIETEKRIEHRIYYKLNLDAFDDLMLQHSGGGESTAPKCNIN
                     SPELQNQHSGGGESTAPKCNINSPEMQYQQPRTSKSTFGE"
     gene            772..1275
                     /locus_tag="ACFJAG_002036"
     CDS             772..1275
                     /locus_tag="ACFJAG_002036"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981242.1"
                     /translation="MNADAFVSADAETCGRETGEPTSPKAESDSNGNGGLSGKPKNAN
                     VPRRRKTHGVPLQEIADLYNEVLGGRLPSVQVLNDTRKRAIANRWCEMLGTAAPNGKV
                     RFGDKETGLAWFAGFFRKVAMNPFWMGENQTGFAVGFDWIFKAGNFVKILEWHPPKTN
                     QAARGRA"
     gene            1272..2630
                     /locus_tag="ACFJAG_002037"
     CDS             1272..2630
                     /locus_tag="ACFJAG_002037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DnaB-like helicase C-terminal domain-containing
                     protein"
                     /protein_id="HFC3981243.1"
                     /translation="MNRIEETEAVQSLASVGAEQNILGGILIEPTAIARCAILTPEKF
                     YQAQHRIIFRALLDMAAANEPIDIITLNDKLEARGEAENAGGLAYLIDLNQNTPSAKN
                     ISRYVGIVNDRFVERGLLKASAAIEKIAVSKDGGTVAEKLSKAADELAAAGKDAVKRE
                     TKTFGQTVEDLIGGLDKRLDGVRFGLPTGLMKLDGMTGGLPDGNLIVIAARPSMGKTV
                     LAENIARFALKQGKAVHFQSYEMSAVELARRGMAAECNIPMQNLKTGNLTQSDYANMP
                     IYVSQAKEWKFDVNCDLLNVDELCFLAKEKKLTTGLDLLVVDHLHIMPRAGRDEVAEL
                     GNISRRLKNLAAELNIPVVLVAQLNRGNTKQADKRPNMADIRGSGAIEQDANIIMPHR
                     ESYYDGNENPSIAELIIAKNRDGETGTVVCGWKGQFMKFEEEPDLAWQAPKHDEYDPY
                     SV"
     gene            2647..>2870
                     /locus_tag="ACFJAG_002038"
     CDS             2647..>2870
                     /locus_tag="ACFJAG_002038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017147223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981244.1"
                     /translation="MRETCFYCNHADFKTNTGTPVRGFAKCAKARNAEERAKHYPRIN
                     HCATGAFQTASGAAVAKRTAVLGEYPPAMRR"
BASE COUNT          783 a          685 c          873 g          529 t
ORIGIN      
        1 aatacaaggt cggtaactgt aaaaatcccg ttgcccatta ctcaatcgca aagtcaggaa
       61 ttgaaccatg agccgggaac aaagaatacg cggagcccgc ttgccggtgc cggctcatat
      121 gcaggcggaa gacgcgggca aggcacggga agcgttggac gggcgggtcg aagaagtgaa
      181 aggggttgat gatgaagccg tctgaaagtt tgagagcggc aggcaggcca atcgcgtatt
      241 acccgaaatt ggcaaagcct ttgggcggtg taaatgcggc aatattattc gggcatttct
      301 tctactggaa cgataagacg cagtatgaat caggcattta ccgaacagcg gaagaaattg
      361 aaattgaaac cgggctgtcc gttcaggaac aaagaacggc acgggcaaag ctgagggaac
      421 gcggcgtatt gattgagact gaaaaacgaa ttgaacaccg catttactac aaactgaatt
      481 tagacgcttt tgatgatttg atgttgcaac attcgggggg tggggaatca acagccccga
      541 aatgcaatat caacagcccc gaacttcaaa atcaacattc ggggggtggg gaatcaacag
      601 ccccgaaatg caatatcaac agccccgaaa tgcaatatca acagccccga acttcaaaat
      661 caacattcgg ggagtgagga atcaacagcc gttataagaa cagaagattt aacagaagat
      721 ttagcagtat ataccccctt acccccaaac gccggaaacg gcaaaggcgg tttgaacgct
      781 gacgcgtttg tttccgctga cgcggaaacg tgcgggcggg aaaccggcga accgacttcg
      841 ccgaaggccg aaagcgacag taacggcaac ggcggccttt cgggaaaacc gaaaaatgcg
      901 aatgttccgc gccgccgcaa aacccacggc gtaccgcttc aggaaatcgc cgatttgtac
      961 aacgaagttt tgggcggccg gttgccaagc gtccaagtgc tgaacgacac gcgcaaacgg
     1021 gcgattgcaa accgctggtg cgagatgctg ggaacggcgg cgccaaacgg caaggtgagg
     1081 ttcggggaca aggaaaccgg tttggcctgg tttgccggtt tcttccggaa agtggcgatg
     1141 aacccgtttt ggatgggcga aaaccaaaca gggtttgcgg tcggcttcga ttggattttc
     1201 aaggcgggca atttcgtcaa aatccttgaa tggcatccgc ctaaaacgaa ccaggcggca
     1261 aggggaaggg catgaaccga atcgaggaaa cggaagcggt ccaatcactg gccagcgtag
     1321 gggcggaaca gaacattttg ggcggcatct tgattgaacc gacggcgatt gcgcggtgcg
     1381 caatcctgac ccctgaaaag ttttaccagg cgcaacacag gattattttc cgcgctctgc
     1441 tggatatggc ggcggcaaac gagcctatcg acatcatcac gctgaacgac aagctggaag
     1501 cgcgcggcga ggcggaaaac gcgggtggcc tggcttactt gatagacctg aaccaaaaca
     1561 ccccaagcgc gaagaatatc agccggtacg ttgggattgt gaacgacagg tttgtcgagc
     1621 gcggcttgct gaaggcttcg gcggcgattg aaaaaatcgc ggtttccaaa gacggcggga
     1681 cggtcgcaga aaagctgtct aaggcggccg acgaattggc ggcagccggc aaagacgcgg
     1741 taaagcgtga aaccaagaca ttcggccaga ccgttgagga tttgattggc ggtttggaca
     1801 aaaggcttga cggcgtgcgt ttcggattgc ctaccggctt gatgaagctt gacgggatga
     1861 ccggcggttt gccggatgga aacctgattg tgattgcggc gcgtccgtct atgggtaaaa
     1921 cggttttggc ggaaaacatt gcgcgattcg cgctgaagca gggcaaggca gttcatttcc
     1981 aaagctacga aatgagcgcg gtagagctgg caaggcgcgg catggcggct gagtgcaata
     2041 tccccatgca gaacctgaaa accggcaatc tgacgcaaag cgattacgcc aatatgccga
     2101 tttacgtcag ccaagcgaaa gagtggaagt ttgacgtgaa ctgcgacctg ctcaacgttg
     2161 acgagctttg ctttttggct aaggagaaaa aactcactac cggcttggat ttgttggttg
     2221 tcgatcacct tcacatcatg ccaagggcag ggagggacga ggtggcggag ttggggaata
     2281 tatcgcgccg tttgaaaaac ttggcggcag agctgaatat ccccgtcgtc ttggttgccc
     2341 agttgaacag gggaaacaca aagcaggcag acaaacgccc gaacatggca gacattcgcg
     2401 gcagcggcgc gattgagcaa gacgcaaaca tcatcatgcc gcaccgcgaa agctactacg
     2461 acggaaacga gaatccgagc attgccgagc tgattatcgc caagaaccgg gacggcgaaa
     2521 cgggaacggt ggtttgcggc tggaaagggc aatttatgaa gttcgaggaa gagcctgatt
     2581 tggcatggca agcccccaaa catgatgaat atgaccctta cagtgtctag tgcgggaggc
     2641 cggtaaatgc gtgaaacctg tttctattgc aaccatgccg acttcaaaac caacaccggc
     2701 acgccggtgc gcggttttgc gaaatgcgcg aaggcgcgga atgcggaaga gcgggcgaag
     2761 cattacccgc gaataaacca ttgcgctacc ggcgcgtttc agacggcatc gggggcggca
     2821 gtcgcaaaaa ggacggcggt gcttggggaa tatccccccg caatgcgccg
//
LOCUS       DAXFZM010000135         2854 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.136, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000135 DAXFZM010000000
VERSION     DAXFZM010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2854)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2854)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2854
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.136"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..667
                     /locus_tag="ACFJAG_002039"
     CDS             <1..667
                     /locus_tag="ACFJAG_002039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HFC3981245.1"
                     /translation="EILSEEKDGNRLARHHKHGKIWKKPTRHEDIAAFFPFGNPIHNN
                     TMIMRRSVIDGGLRYNTGRDWAEDYQFWYDVSKLGRLAYYPEALVKYRLHANQVSSKH
                     SVRQHEIAQGIQKTARNDFLQSMGFKTRFDSLEYRQTKAAAYELPEKDLPEEDFERAR
                     RFLYRCFKRTDTPPSGAWLDFAADGRMRRLFTLRQYFGILYRLIKNRRQARSDSAGKE
                     QEI"
     gene            667..1506
                     /locus_tag="ACFJAG_002040"
     CDS             667..1506
                     /locus_tag="ACFJAG_002040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 25 protein"
                     /protein_id="HFC3981246.1"
                     /translation="MQNHVISLASAAERRAHIADTFGSRGIPFQFFDALMPSERLERA
                     MAELVPGLSAHPYLSGVEKACFMSHAVLWKQALDEGVPYIAVFEDDVLLGEGAGQFLA
                     EDTWLQERFDPDSAFVVRLETMFMHVLTSPSGVADYGGRAFPLLESEHCGTAGYIISR
                     KAMRFFLDRFAVLPPERLHPVDLMMFGNPDDREGMPVCQLNPALCAQELHYAKFHDQN
                     SALGSLIEHDRRLNRKQQRRDSPANTFKHRLIRALTKIGREREKRRKRREQTIGKIIV
                     PFQ"
     gene            1518..2438
                     /locus_tag="ACFJAG_002041"
     CDS             1518..2438
                     /locus_tag="ACFJAG_002041"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010361211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 8 protein"
                     /protein_id="HFC3981247.1"
                     /translation="MDIVFAADDNYAAYLCVAAKSVEAAHPDTEIRFHVLDAGISEAN
                     RAAVAANLRGGGNIRFIDVNPEDFAGFPLNIRHISITTYARLKLGEYIADCDKVLYLD
                     TDVLVRDGLKPLWDTDLGGNWVGACIDLFVERQEGYKQKIGMADGEYYFNAGVLLINL
                     KKWRRHDIFKMSCEWVEQYKDVMQYQDQDILNGLFKGGVCYANSRFNFMPTNYAFMAN
                     GFASRHTDPLYLDRTNTAMPVAVSHYCGSAKPWHRDCTVWGAERFTELAGSLTTVPEE
                     WRGKLAVPPTKRMLQRWRKKLSARFLRKIY"
     gene            2498..>2854
                     /locus_tag="ACFJAG_002042"
     CDS             2498..>2854
                     /locus_tag="ACFJAG_002042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HFC3981248.1"
                     /translation="MQPLVSVLICAYNVEKYFAQSLSAVVGQTWRNLDILIVDDGSTD
                     GTPAIARRFQEQDGRIRIISNPRNLGFIASLNIGLDELAKSGGGEYIARTDADDIASP
                     GWIEKIVGEMEKDRSII"
BASE COUNT          694 a          752 c          804 g          604 t
ORIGIN      
        1 ggaaattttg tcggaagaaa aggacggcaa ccggctggcg cggcatcaca aacacggcaa
       61 aatttggaaa aagccgaccc ggcacgaaga catcgccgcc tttttccctt tcggcaaccc
      121 catacacaac aacacgatga ttatgcggcg cagcgtcatt gacggcggtt tgcgttacaa
      181 caccgggcgg gattgggcgg aagattacca attttggtac gatgtcagca aattgggcag
      241 gctggcttat tatcccgaag ccttggtcaa ataccgcctt cacgccaatc aggtttcatc
      301 caaacacagc gtccgccaac acgaaatcgc gcaaggcatc caaaaaaccg ccagaaacga
      361 ttttttgcag tctatgggtt ttaaaacccg gttcgacagc ctagaatacc gccaaacaaa
      421 agcagcggcg tacgaattgc cggagaagga tttgccggaa gaagattttg aacgcgcccg
      481 ccggtttttg taccgatgct tcaaacggac ggacacgccg ccctccggcg cgtggctgga
      541 tttcgcggca gacggcagga tgaggcggct gtttaccttg aggcaatact tcggcatttt
      601 gtaccggctg attaaaaacc gccggcaggc gcggtcggat tcggcaggga aagaacagga
      661 gatttaatgc aaaaccacgt tatcagcttg gcttccgccg cagagcgcag ggcgcacatt
      721 gccgatacct tcggcagtcg cggcatcccg ttccagtttt tcgacgcact gatgccgtct
      781 gaaaggctgg aacgggcgat ggcggaactc gtccccggct tgtcggcgca cccctatttg
      841 agcggagtgg aaaaagcctg ctttatgagc cacgccgtat tgtggaaaca ggcattggac
      901 gaaggcgtac cgtatatcgc cgtatttgag gacgacgttt tactcggcga aggcgcgggg
      961 cagttccttg ccgaagatac ttggctgcaa gaacgctttg accccgattc cgcctttgtc
     1021 gtccgcttgg aaacgatgtt tatgcacgtc ctgacctcgc cctccggcgt ggcggactac
     1081 ggcgggcgcg cctttccgct tttggaaagc gaacactgcg ggacggcggg ctatattatt
     1141 tcccgaaagg cgatgcgttt tttcttggac aggtttgccg ttttgccgcc cgaacgcctg
     1201 caccctgtcg atttgatgat gttcggcaac cctgacgaca gggaaggaat gccggtttgc
     1261 cagctcaatc ccgccttgtg cgcccaagag ctgcattatg ccaagtttca cgaccaaaac
     1321 agcgcattgg gcagcctgat cgaacatgac cgccgcctga accgcaaaca gcaaaggcgc
     1381 gattcccccg ccaacacatt caaacaccgc ctgatccgcg ccttgaccaa aatcggcagg
     1441 gaaagggaaa aacgccggaa aaggcgcgaa cagacaatcg gcaagattat tgtgcctttc
     1501 caataaaagg agaagagatg gacatcgtat ttgcggcaga cgacaactat gccgcctacc
     1561 tttgcgttgc ggcaaaaagc gtggaagcgg cccatcccga tacggaaatc aggttccacg
     1621 tcctcgatgc cggcatcagt gaggcaaacc gggcggcggt tgccgccaat ttgcgggggg
     1681 ggggtaatat ccgctttata gacgtaaacc ccgaagattt cgccggcttc cccttaaaca
     1741 tcaggcacat ttccattacg acttatgccc gcctgaaatt gggcgaatac attgccgatt
     1801 gcgacaaagt cctgtatctg gatacggacg tattggtcag ggacggcctg aagcccttat
     1861 gggataccga tttgggcggt aactgggtcg gcgcgtgcat cgatttgttt gtcgaaaggc
     1921 aggaaggata caaacaaaaa atcggtatgg cggacggaga atattatttc aatgccggcg
     1981 tattgctgat caacctgaaa aagtggcggc ggcacgatat tttcaaaatg tcctgcgaat
     2041 gggtggaaca atacaaggac gtgatgcaat atcaggatca ggacattttg aacgggctgt
     2101 ttaaaggcgg ggtgtgttat gcgaacagcc gtttcaactt tatgccgacc aattatgcct
     2161 ttatggcgaa cgggtttgcg tcccgccata ccgacccgct ttacctcgac cgtaccaata
     2221 cggcgatgcc cgtcgccgtc agccattatt gcggctcggc aaagccgtgg cacagggact
     2281 gcaccgtttg gggtgcggaa cgtttcacag agttggccgg cagcctgacg accgttcccg
     2341 aagaatggcg cggcaaactt gccgtcccgc cgacaaagcg tatgcttcaa agatggcgca
     2401 aaaagctgtc tgccagattc ttacgcaaga tttattgacg gggcaggccg tctgaagcct
     2461 tcagacggca tcggacgtat cggaaaggag aaacggattg cagcctttag tcagcgtatt
     2521 gatttgcgcc tacaacgtag aaaaatattt tgcccaatcg ctgtccgccg tagtggggca
     2581 gacttggcgc aacttggata ttttgattgt cgatgacggc tcgacggacg gcacgcccgc
     2641 cattgcccgg cgtttccaag aacaggacgg caggatcagg ataatttcca atccccgcaa
     2701 tttgggcttt atcgcctctt taaacatcgg gctggacgaa ttggcaaagt cggggggggg
     2761 ggaatatatt gcgcgcaccg atgccgacga tattgcctcc cccggctgga ttgagaaaat
     2821 cgtgggcgag atggaaaaag accgcagcat catt
//
LOCUS       DAXFZM010000136         2746 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.137, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000136 DAXFZM010000000
VERSION     DAXFZM010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2746)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2746)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2746
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.137"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            204..488
                     /locus_tag="ACFJAG_002043"
     CDS             204..488
                     /locus_tag="ACFJAG_002043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2523 domain-containing protein"
                     /protein_id="HFC3981249.1"
                     /translation="MKLLAALIPLLMNVAGRILTALGLMAVTYAGVDRLAAHFQQAIT
                     HSITGAPQAMLQLFYISGGGTVLNILFGAIAFILSFKQMTKLATSIGKKK"
     gene            489..1676
                     /locus_tag="ACFJAG_002044"
     CDS             489..1676
                     /locus_tag="ACFJAG_002044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zonular occludens toxin domain-containing
                     protein"
                     /protein_id="HFC3981250.1"
                     /translation="MAEICLITGTPGSGKTLKMVSMMANDEMFKPDENGVRRKVFTNI
                     KGLKIPHTHIETDAKKLPKSTDEQLSAHDMYEWIKKPENVGAIVIVDEAQDVWPARSA
                     GSKIPENVQWLNTHRHQGIDIFVLTQGPKLLDQNLRTLVKRHYHIAANKMGLRTLLEW
                     KVCADDPVKMASSAFSSIYTLDKKVYDLYESAEIHTVNKVKRSKWFYALPVIILLIPL
                     FVGLSYKMLGSYGKKQEEPAAQESAATEQQAVLPDKTEGESVNNGNLTADMFVPTLPE
                     KPESKPIYNGVRQVRTFEYIAGCIEGGRTGCTCYSHQGTALKEVTELMCKDYVKNGLP
                     FNPYKEESQGQEVQQSAQQHSDRAQVATLGGKPQQNLMYDNWEERGKPFEGIGGGVVG
                     SAN"
     gene            1891..>2746
                     /locus_tag="ACFJAG_002045"
     CDS             1891..>2746
                     /locus_tag="ACFJAG_002045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110-like element ISNgo3 family transposase"
                     /protein_id="HFC3981251.1"
                     /translation="MNIIGPDISKDTIDATLHKTNGSIHYIKFKNNDDGLKQFRLWIK
                     GNRIRKVYIGMEATGIYYEKAADMLSSYYTVYVINPLKINDYGKSRFNRTKTDKADSN
                     LIADYIKRHQDTLIPYQIPKNKALQKLINLKNQLQQQQKQIKNRLHSTEEDFIRNIHQ
                     DLIDTIQDKMEQVKIAISEQIKKQTDNNHYRNLQTIPSIGKDTASVLYAQLTEKHFKT
                     ANQFVSYAGLSPAIIQSGTSVRGRGRLSRYGNRRLKSTLYMPALCAYRFNAFPKLINN
                     LKKAGKPKM"
BASE COUNT          954 a          585 c          627 g          580 t
ORIGIN      
        1 taagcaactt tagccaaagg caggcgaagt accgcacttt gcgggcgaag ccgcaaacag
       61 ccgagaagcg cggggggggg attggcgata agcgcgaggg ggtgtcccca cagcgctgcc
      121 gcgccgcgaa tgcggagcaa tctttcagat taagaaacat ttgtttaatg aggcaaacgt
      181 gccttttaag aaagggagag caaatgaaat tgttggccgc attgattccg ctcttgatga
      241 acgtcgcagg ccgtatattg actgcattag gcttgatggc tgttacctat gcgggtgtag
      301 atagattggc agcccatttt caacaggcga taacccatag cataacgggc gcgcctcaag
      361 caatgttaca gcttttctat ataagcggcg gtggtactgt tctaaacatt cttttcggcg
      421 caatcgcctt tattctgtcc tttaaacaaa tgacaaaact cgcaacctca atcgggaaga
      481 aaaaataaat ggcagaaatc tgtttgataa ccggcacgcc cggttcaggg aaaacattaa
      541 aaatggtttc catgatggca aacgatgaaa tgtttaagcc agatgaaaac ggcgtacgcc
      601 gtaaagtatt tacgaacatc aaaggtttga agataccgca cacccacata gaaacagacg
      661 caaagaagct gccgaaatca accgatgaac agctttcggc gcatgatatg tatgaatgga
      721 tcaagaagcc tgaaaacgtc ggcgcaatcg ttattgtcga tgaggcgcaa gacgtatggc
      781 ccgcacgctc cgcaggttcg aaaatccccg aaaacgtcca atggctgaac acacacaggc
      841 atcagggcat agatatattt gtattgacac aaggtcctaa actcttagat cagaacttgc
      901 gaacattggt taaaagacat taccacattg cggccaacaa aatgggtttg cgtaccctgc
      961 ttgaatggaa agtatgcgcg gatgacccgg taaaaatggc atcaagtgca ttttccagta
     1021 tctacacact ggataaaaaa gtttatgact tgtacgaatc cgcagaaatt cacacggtaa
     1081 acaaagtcaa gcgttcaaaa tggttttatg cattgcccgt catcatatta ttgattccgc
     1141 tatttgtcgg tttgtcttac aaaatgttgg gcagttacgg aaaaaaacag gaagaacccg
     1201 cagcacaaga atcggcggca acagaacagc aggcagtact tccggataaa acagaaggag
     1261 aatcggtgaa taacggaaac cttacggcag atatgtttgt tccgacattg cccgaaaaac
     1321 ccgaaagcaa gccgatttat aacggtgtaa ggcaggtaag gacctttgaa tatatagcag
     1381 gctgtataga aggcggaaga accggatgca cctgctattc gcatcaaggg acggcattga
     1441 aagaagtgac ggagttgatg tgcaaggact atgtaaaaaa cggcttgccg tttaacccat
     1501 acaaagaaga aagccaaggg caggaagttc agcaaagcgc gcagcaacat tcggacaggg
     1561 cgcaagttgc caccttgggc ggaaaaccgc agcagaacct aatgtacgac aattgggaag
     1621 aacgcgggaa accgtttgaa ggaatcggcg ggggcgtggt cggatcggca aactgaagaa
     1681 aacggcaaca gagaaaaaag acccgtaaac cgtttgaata tagacggctt acgggtcttt
     1741 gtttcgcgca aagcaagggc taaggcagtc aggcagcaaa tcccgcaatg tattaaaaca
     1801 gacgcgtaga aatgccggct gcctttatcc atcctcaaaa ttgaatatca tcctagccgt
     1861 atcaaggctg tataaataag gaaaatacca atgaatataa tcgggccgga catctcaaag
     1921 gacaccatag acgcaacatt gcataaaaca aacggaagta tccattacat taaatttaag
     1981 aataatgatg atggattaaa acagtttaga ttgtggataa agggaaacag aatcagaaaa
     2041 gtctatatcg gcatggaggc aacaggcatc tattacgaaa aggcagcaga tatgctttct
     2101 tcctactata ccgtttacgt tatcaatccc ttaaaaatca atgactacgg aaaaagcagg
     2161 tttaaccgta ccaaaaccga caaagcagat tcaaacctga tagcagatta cataaaaagg
     2221 catcaagata cattgatacc gtatcagata cccaaaaaca aagcactgca aaaactgatt
     2281 aatcttaaaa accaattaca gcaacagcag aagcaaatta aaaaccgtct tcatagcact
     2341 gaagaagact tcataaggaa catacatcaa gacttgatag ataccataca ggacaagatg
     2401 gaacaggtaa aaatagccat atccgaacaa atcaaaaaac aaacggacaa taaccattac
     2461 cgcaatcttc aaaccatccc gagcataggc aaagacaccg catcagttct ttatgcgcaa
     2521 ctgacagaaa aacattttaa aaccgcaaac caatttgtat cctatgccgg attaagtccc
     2581 gccatcatac aatcagggac aagcgtaaga ggtcggggca gattgagccg atacggaaac
     2641 agacgattaa aaagtacgct gtatatgccc gccctttgtg cttaccgttt taacgcattt
     2701 ccgaaattaa taaataatct gaaaaaagcg ggtaagccaa agatgg
//
LOCUS       DAXFZM010000137         2627 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.139, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000137 DAXFZM010000000
VERSION     DAXFZM010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2627)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2627)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2627
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.139"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(358..918)
                     /locus_tag="ACFJAG_002046"
     CDS             complement(358..918)
                     /locus_tag="ACFJAG_002046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981252.1"
                     /translation="MDIKTEEAYRLSFQHIQSHDVLAACRTVANYELSQPRPRGLFSG
                     ISAQEYWESYPCNEDAEILKSILLDSPEILDGISGGDMEMARIMAAFNFIWGLSHFPK
                     WLHRHEFASTPLDDSAVPAMLLFHAQSRQELKEYEEVELSCCPDGCEFCKSEDGKIYK
                     SSDAPVLPHAHCTHEQGCRCCYLPVI"
     gene            complement(918..1616)
                     /locus_tag="ACFJAG_002047"
     CDS             complement(918..1616)
                     /locus_tag="ACFJAG_002047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S24 family peptidase"
                     /protein_id="HFC3981253.1"
                     /translation="MNRVDRIKNLIADRFNGNQAEFSRAINKAPAQINQWLNGYRNIG
                     DGVAAQIEIALGLPRGWVDGNDKPGIPVDSIKSNATVIGSVDAWDSKTPLSDDDCEVP
                     FYKDVCLSAGNGFSDEIEDYNGYKLRFSKSTLRRHGINPDDVVCVSADGDSMEPVFPD
                     GATLGINTADKMIKDGKIYAINHSGLLRTKILQKLPDNQVRIKSYNPEYKDETASLDS
                     LTVIGRVFWWSVLD"
     gene            1730..1960
                     /locus_tag="ACFJAG_002048"
     CDS             1730..1960
                     /locus_tag="ACFJAG_002048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HFC3981254.1"
                     /translation="MDLRDYCAIRGNQSDLARKTGISPSFIHQIAKGLKPVPIQSAAL
                     IEKSTNGRVTRKEMFPDTWHLIWPELADDQPK"
     gene            2063..>2627
                     /locus_tag="ACFJAG_002049"
     CDS             2063..>2627
                     /locus_tag="ACFJAG_002049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replication protein"
                     /protein_id="HFC3981255.1"
                     /translation="MKYIPNSFQIANAVVDDFLCRMSGNAWKCYAVIVRKTTGWQKEI
                     DYISVSQFKNLTGIKTDVTVADALKELVELNLIASVKRHGQVTGYRINMPEPSPENGG
                     TPPPENGGTPPPENGGTATPKNWVHPKNGTTPKNWGVLPPENGGTTTPKNWGSTKHTT
                     KPTNTKHSISASAAADAPLSAEPPESGK"
BASE COUNT          735 a          622 c          583 g          687 t
ORIGIN      
        1 gccaaaccga tttattctgc tgattaattc gttcatctcg tttccttcaa gttgttgttt
       61 gtttcgatgg gtaaagtata gcaaagctaa ataataaatc aatagcaccg ctatatttat
      121 tttgctatat tttgatatac ttttgattat taaaagaatt tatttttgag atttcgcagg
      181 cacaaaaaaa ccgcctttcg ggcggctttt ttacgaacat aaaaaaatta taaagtcaag
      241 gaagcaccat gttgacttcc tgaaatcacc atgccgattt cctaacaccg gcgggcaagc
      301 ctacatgatg ttcatttttt gggtattaaa aaagcccgca tcgcgcgggc tgtgttttta
      361 aataacaggc agatagcaac atcggcaacc ctgctcatgc gtgcagtgtg cgtgtgggag
      421 aacgggtgcg tctgatgatt tgtatatctt gccgtcctcc gatttacaaa attcacaacc
      481 atcggggcaa caagacagct cgacttcttc gtactctttt aattcctgac gcgattgtgc
      541 gtggaaaagc agcattgcag ggacggcaga atcatcaaga ggcgttgatg caaattcatg
      601 ccggtgaagc catttcggga aatgactcaa tccccaaata aaattgaatg cagccatgat
      661 tcgcgccatt tccatatcgc cgccgctgat tccgtccagt atttcagggg aatctaaaag
      721 gatagatttc aagatttcag cgtcctcatt gcacgggtag ctctcccagt attcttgagc
      781 ggatatgccc gaaaacagcc cgcgcggtct tggctgcgat aattcataat ttgcaaccgt
      841 tctacacgcc gccaatacgt cgtgtgattg aatgtgttga aagctcaatc gatatgcttc
      901 ttctgtttta atatccatta gtctaataca ctccaccaaa ataccctgcc aataacggtt
      961 aggctgtcta aagaggcggt ttcgtctttg tattccgggt tgtagctctt gatacggact
     1021 tgattatcag gcagcttttg caagattttt gtacgcaaca gcccactgtg gttgatggca
     1081 tagattttgc cgtctttaat cattttatcg gcagtattaa tacccagtgt agccccgtcg
     1141 gggaataccg gctccatact gtctccgtcg gcagatacgc agacaacatc gtcagggttt
     1201 atgccgtgcc gtcttaaggt tgattttgag aaacgcagtt tatagccgtt gtagtcttca
     1261 atttcatctg aaaagccgtt acccgccgac aaacaaacgt ctttataaaa tggaacttcg
     1321 caatcatcgt cggataacgg ggttttgcta tcccaagcgt caacagagcc gataacggtg
     1381 gcgtttgatt tgatggaatc aacagggata cccggcttgt cgtttccatc cacccatccg
     1441 cgcggtaatc caagcgcgat ctcaatttgg gcggctacgc cgtcccctat atttctgtat
     1501 ccgttaagcc attgatttat ctgggcagga gctttattaa ttgcccgaga aaactcagct
     1561 tgattgccgt taaacctgtc ggctatcaga tttttaattc tatctactcg gttcatttca
     1621 ttaccccttc aaataggtat aaatataaag catagctaca tttatcaatg ctactatttt
     1681 atatttagct atgctatact cacgctaaat tgatttgaca gagatcgaaa tggatttaag
     1741 agattattgc gcgatacgcg gcaatcagtc tgatttggca agaaaaacag gaatttcccc
     1801 gtcttttatc catcagattg ccaaaggatt gaagcccgtc ccaattcagt cggcggcgtt
     1861 gattgaaaag tcaacaaacg gcagggtaac acgaaaagag atgtttcctg atacctggca
     1921 tctaatctgg ccggaattgg cagacgacca acccaaataa aaagcccgtc ggggatgacg
     1981 ggcagccggt tacgcattac tcgattgttg aaaacggggt ggaagtgtgg gcgcaagacc
     2041 aatgggaatg gaaggacggt aaatgaaata tattccaaat tcgtttcaga tagcaaacgc
     2101 ggtagtggac gatttcctct gccgaatgag cggcaacgcg tggaaatgct acgccgtcat
     2161 cgtgcgcaaa acgaccggct ggcaaaagga aattgactac atctctgttt cccaatttaa
     2221 aaacctgacc ggaatcaaaa cagacgtaac agttgccgac gcgctgaaag agcttgtgga
     2281 attgaacctg attgcctccg tcaaacggca cggtcaggta accggctacc gcatcaatat
     2341 gcccgaaccg tcccccgaaa atgggggtac accacccccg gaaaatgggg gtacaccacc
     2401 cccggaaaat gggggtactg ccacccccaa aaattgggta cacccaaaaa atgggactac
     2461 ccccaaaaat tggggggtac tacccccgga aaatgggggt actaccaccc ccaaaaattg
     2521 ggggtctaca aaacacacta caaaacccac taatacaaaa cacagtatta gcgcatccgc
     2581 agcggcggac gcgccccttt ctgccgaacc tcccgaaagc ggaaaac
//
LOCUS       DAXFZM010000138         2606 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.140, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000138 DAXFZM010000000
VERSION     DAXFZM010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2606)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2606)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2606
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.140"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(46..1014)
                     /gene="ispH"
                     /locus_tag="ACFJAG_002050"
                     /gene_synonym="lytB"
     CDS             complement(46..1014)
                     /gene="ispH"
                     /locus_tag="ACFJAG_002050"
                     /gene_synonym="lytB"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051745 - 4-hydroxy-3-methylbut-2-enyl
                     diphosphate reductase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA];
                     GO_process: GO:0050992 - dimethylallyl diphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HFC3981256.1"
                     /translation="MNGKTIILANPRGFCAGVDRAISIVERALEEFGAPVYVRHEVVH
                     NKFVVDNLREKGAVFIEDLAEVPPGATLVYSAHGVSKAVQQEAAERGFRVFDATCPLV
                     TKVHKEVARLDAQDCEIIMIGHKGHAEVEGTMGQLAPGKMLLVETVGDVAKLEVRNPD
                     KLAYVSQTTLSVDETKDIIAALNARFPNIRNPHKEDICYATTNRQTAVKELAEQCDIV
                     IVVGSPNSSNSNRLREVAASRGIDAYMVDNASYLQRTWFEGKSKVGVTAGASAPEVLV
                     REVLAAIRGWGHETVREGGGAEESIVFVLPKELRREGETKPDLCKR"
     gene            complement(1044..1538)
                     /gene="lspA"
                     /locus_tag="ACFJAG_002051"
     CDS             complement(1044..1538)
                     /gene="lspA"
                     /locus_tag="ACFJAG_002051"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HFC3981257.1"
                     /translation="MSSSVSSKTRYWVLALAAIVLDQWSKWAVLSSFQYRERVNVIPS
                     FFDLTLVYNPGAAFSFLADQGGWQKYFFLVLAVAVSAYLVRAILRDEFAALGKIGAAM
                     IIGGASGNVIDRLIHGHVVDFLLFYWQNWFYPAFNIADSFICVGAVLAVLDNIVHRKD
                     SKKT"
BASE COUNT          601 a          753 c          651 g          601 t
ORIGIN      
        1 gcatttgtat tgcccaaaca tccgatgcct gcgttaacgc ctgcgtcaac gtttgcacaa
       61 atcgggtttg gtttcgccct cgcggcgcag ctccttgggc aggacgaaca cgatgctttc
      121 ttccgcgccc cccccttcgc gcacggtttc atgcccccat ccgcgtatgg ctgccaatac
      181 ttcccgcacc aacacttcgg gcgcggacgc gcctgccgtt acgccgactt tgcttttgcc
      241 ttcaaaccac gtgcgttgca ggtaggacgc gttgtccacc atatacgcat cgattccgcg
      301 cgatgccgcc acttcgcgca ggcggttgct gttggacgaa ttgggcgaac cgaccacaat
      361 cacgatgtcg cactgttccg ccagctcttt gacggcggtt tgccggttgg tcgtcgcata
      421 gcagatgtct tccttgtgcg gattgcggat attggggaaa cgcgcgttca gcgcggcgat
      481 gatgtctttg gtttcatcga ccgagagcgt ggtttggctg acataggcga gtttgtcggg
      541 gtttctgact tcgagttttg ccacatctcc gaccgtttcg accaaaagca ttttgcccgg
      601 tgcaagctgc cccatcgtgc cttcgacctc ggcgtgcccc ttatgcccga tcatgatgat
      661 ttcacagtct tgggcatcca gtcgggcgac ttccttatgc actttcgtca ccagcgggca
      721 agtcgcatca aatacccgga aaccgcgctc cgccgcttcc tgctgcaccg ccttcgatac
      781 gccgtgtgcc gaataaacca gtgtcgcgcc cggcggcact tccgccaagt cttcgataaa
      841 caccgcgcct ttttcgcgca ggttgtccac gacgaatttg ttgtggacga cttcgtggcg
      901 cacataaacc ggcgcgccga attcttccaa agcacgttcg acaatactga ttgcccgatc
      961 cacaccggcg cagaagccgc gcggattggc aaggatgatg gtttttccgt tcataagttt
     1021 tgcattccgt gttcagacgg cattcacgtt tttttgctat ctttgcgatg gacgatattg
     1081 tcaagcaccg ccaacaccgc accgacgcag ataaagctgt cggcaatatt aaaggcggga
     1141 taaaaccaat tttgccaata aaacaataag aaatcgacga catgaccgtg tatcaggcga
     1201 tcgatgacat tgcccgacgc accgccgata atcattgccg ccccgatttt gccgagggct
     1261 gcaaactcgt cgcgcaagat ggcgcgtacc aaatacgcgc tcaccgccac cgccagcacc
     1321 aaaaaaaagt atttctgcca gccgccctga tcggcaagga agctgaatgc cgcgcccgga
     1381 ttgtacacca gcgtcagatc gaaaaacgaa gggatgacgt tgacgcgttc ccgatactga
     1441 aacgacgaca gcaccgccca cttcgaccac tggtccagca cgatggcggc aagtgccaat
     1501 acccaatagc gcgttttact tgaaacagat gaagacatat ttttcaacag ccggataaaa
     1561 gagtgccatt ctacccgaaa accccccttt cctgtacccg aaacggcaaa tgccgtaatc
     1621 ttgaaacccg tcattcccgc gcaggcggga atccggaccc gtccgcacgg aaacttatcg
     1681 gataaaacgg ttgcccaaac cccgcgtcct agattcccac ttccgtggga atgacggttc
     1741 ggttgcgtag ggccgggtgg tcgaaaaggc ggattcgatg gattcgatga aaacggtaga
     1801 catgttggat tgatggaaat ggcgggccga agcacaccct acggcccgcc ggatttccgc
     1861 ctgcgcggga atgacggggt ttcaggttgc tgtttcaggt ttctgttttt aagtttctgt
     1921 ttcggtttgc tattttatag aaatgacgaa attttagatt gcaagaactt atcccctccg
     1981 ccgtcattcc cacggaagtg ggaatctaga aataaaaagc agcaggaatt tatcggaaat
     2041 aactgaaacc gaacggaccg gattcccgcc tgcgcgggaa tgacgattca taagtttccc
     2101 gaaattccaa cataaccgaa acctgacagt aaccgtagca accgaaccgt cattcccgcg
     2161 aaagcgggaa tctagaatct cggactttca gataatcttt gaatattgct gttgttctaa
     2221 ggtccggact cccgcccgcg cgggaatgac ggcggaaaga tgcccgacgg tctttatagc
     2281 ggattaacaa aaatcaggac aaggcggcgg gccgcagacg gtacaaatgg tacggaaccg
     2341 atccgcccgg tgcttcagca ccttagggaa ccgttccctt tgagccgggg cggggcaacg
     2401 ccgtaccggt ttttgttaat ccgccatatt gtattgaaac accgcccgga acccgatata
     2461 atccgccttt caacatcagt gaaaatcttt ttttaaccgg tcaaaccgaa taaggagtcg
     2521 aaaaatgaat ccagcccgca aaaaaccttc tcttctcttc tcttctcttc tcttctcttc
     2581 tcttctcttc cgcagcgcag gcggca
//
LOCUS       DAXFZM010000139         2448 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.141, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000139 DAXFZM010000000
VERSION     DAXFZM010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2448)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2448)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2448
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.141"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(121..1572)
                     /locus_tag="ACFJAG_002052"
     CDS             complement(121..1572)
                     /locus_tag="ACFJAG_002052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine synthase"
                     /protein_id="HFC3981258.1"
                     /translation="MLSFLSGLLSLGIEVLWVRMFSFAAQSVPQAFSFTLACFLTGIA
                     VGAYFGKRICRSRFVDIPFIGQCFLWAGIADFLILGAAWLLTGFSGFVHHAGIFITLS
                     AVVRGLIFPLVHHVGTDGNKSGRQVSNVYFANVAGSALGPVLIGFVILDFLSTQQIYL
                     LICLISAAVPLFCTPFQKSLRLNAVSVAVSLMFGILMFLLPDSVFQNIAGRPDRLIEN
                     KHGIVAVYHRDGNKVVYGANVYDGAYNTDIFNSVNGIERAYLPPSLKSGIRRIFVVGL
                     STGSWARVLSAIPEMQSMIVAEINPAYRSLIADEPQIAPLLQDKRVEIVLDDGRKWLR
                     RHPDEKFDLILMNSTWYWRAYSTNLLSAEFLKQVQSHLTPDGIVMFNTTHSPHAFATA
                     VHSIPYAYRYGHMVVGSATPVVFPNKELLKQRLSRLIWPESGRHVFDSSTVDAAAQKV
                     VSRMLIRMTEPSAGAEVITDDNMIVEYKYGRGI"
     gene            complement(1595..2215)
                     /locus_tag="ACFJAG_002053"
     CDS             complement(1595..2215)
                     /locus_tag="ACFJAG_002053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused MFS/spermidine synthase"
                     /protein_id="HFC3981259.1"
                     /translation="MNSTASKTLKGLSLVFFASGFCALIYQVSWQRLLFSHIGIDLSS
                     ITVIISVFMVGLGVGAYFGGRIADRFPSSIIPLFCIAEVSIGLFGLVSKGLISGLGHL
                     LVEADLPIIAAANFLLLLLPTFMMGATLPLLTCFFNRKIHNVGESIGTLYFFNTLGAA
                     LGSLAAAEFFYVFFTLSQTIALTACLNLLIAASVWLRYRKDGYGEH"
BASE COUNT          760 a          585 c          573 g          530 t
ORIGIN      
        1 ggacaaaatg tttaaaccat tttgtcccga ctgctgtgat gcggtttttt tgaactagca
       61 ggacgttacc taaaacctgc gttgcctaaa acctgcgttg cctgaaaccc tttaagacgg
      121 ttaaatccct ctgccgtatt tgtattctac aatcatatta tcgtcagtaa tgacttccgc
      181 cccagccgaa ggttccgtca tccgaatcag catacgagag acaacctttt gtgctgcagc
      241 atccacggtg ctgctgtcaa atacgtgcct gccgctttcc ggccaaatca accgggaaag
      301 gcgttgcttg agcagttctt tattagggaa aactaccggg gttgccgagc cgactaccat
      361 atgcccgtag cggtatgcat agggaatact gtgtacggcg gtagcaaaag catgcgggct
      421 gtgcgtggta ttaaacatta caataccatc cggggtaagg tggctttgca cctgttttaa
      481 aaattccgca ctcaacaggt tagtggaata ggcacgccag taccaagtcg aattcatcaa
      541 aatcaggtcg aatttttcat caggatggcg acgcagccat ttcctaccgt catccaatac
      601 aatttcaaca cgtttgtcct gcaaaagcgg tgcgatttgc ggctcgtccg cgataaggct
      661 acggtatgcc ggattgattt ccgcaacgat catcgactgc atttccggaa tggcagacaa
      721 gacgcgcgcc cacgaacctg tactcaatcc aacgacgaaa atgcggcgta tgccggactt
      781 cagggagggt ggcagatagg cacgttcgat gccgttgaca ctattgaata tatcggtatt
      841 gtatgcgccg tcgtatacat tcgccccata aacaacctta ttaccatctc tatggtaaac
      901 cgcaacaatg ccgtgtttgt tttcaatcaa cctatccgga cggccagcaa tattttgaaa
      961 gacagaatcc ggcagtagga acatgaggat gccgaacatt agggaaactg ctaccgacac
     1021 tgcattcagt cggagacttt tttggaacgg tgtacaaaac aaagggacag cagcagaaat
     1081 caaacagatg agcaggtaaa tctgttgggt ggacaagaaa tcaagtatca caaagccgat
     1141 aaggaccgga cccaatgcac tgccggcaac gttggcgaaa taaacattgg aaacctgtcg
     1201 tccggatttg ttgccatccg tacccacatg gtgtacaagt gggaaaatca accccctgac
     1261 gacggcagac agggtaatga agataccggc gtggtggacg aagccggaaa aacccgtcaa
     1321 caaccacgca gcacccaaaa tcaaaaaatc ggcaataccc gcccacaaga agcactgccc
     1381 gataaaggga atatcaacaa agcggctgcg gcaaatccgt ttgccaaaat acgcgccgac
     1441 ggcgataccg gtcagaaaac aggcaagagt aaatgaaaat gcctgaggca cggactgtgc
     1501 tgcgaacgaa aacatcctta cccacaagac ttctataccc aagctcaata atccgctaag
     1561 gaaagaaagc atataaatca aactagtatt cggtttagtg ttcaccatat ccatcctttc
     1621 tgtaacgcag ccatactgaa gcagcaatca gaaggttaag gcaggctgtc agcgcaatgg
     1681 tttgggagag ggtaaaaaag acgtagaaaa attcggcggc ggcaagcgat ccgagtgccg
     1741 cacccaaagt gttgaaaaaa tataaggtac cgatagactc gccaacatta tgtattttcc
     1801 ggttaaaaaa acaggtcagc aagggcaagg tcgcgcccat cataaaggta ggaagcagca
     1861 ataagaggaa attggcagca gcgatgatgg gcaaatcagc ctcaactaaa agatgcccca
     1921 agccggaaat cagacccttg cttaccaaac cgaacagacc gatggatact tcagcgatgc
     1981 aaaacagggg gatgatactt gaaggaaaac ggtcagcaat gcgtccgccg aaatacgcac
     2041 ctacacccaa gccgaccata aatacagaaa taatgacagt aatcgaactc aaatcgatac
     2101 ctatgtggct gaatagaagc ctctgccagc tgacctggta aatcagggcg cagaagccag
     2161 aggcgaaaaa caccagcgac aatcctttca gggttttact tgcggtcgaa ttcatatttt
     2221 ctattttcaa ataggcggaa ctataaatga aatgtattaa tgtgtaaaca tttgtattag
     2281 ccgtaggaaa tcaccgcatt gctcaaactg caggccggga aaataaactc gtaagcccgc
     2341 aaacggcgta tcactgttca aactgctgtg cggcttcatg acgttataaa aattaagggg
     2401 ccgtcctgga caactaggat aaactcgatt ttgctaattg ttttaaaa
//
LOCUS       DAXFZM010000140         2367 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.142, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000140 DAXFZM010000000
VERSION     DAXFZM010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2367)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2367)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2367
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.142"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            178..1023
                     /gene="mafB"
                     /locus_tag="ACFJAG_002054"
                     /pseudo
     CDS             178..1023
                     /gene="mafB"
                     /locus_tag="ACFJAG_002054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246532.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 3"
     gene            1033..1239
                     /locus_tag="ACFJAG_002055"
     CDS             1033..1239
                     /locus_tag="ACFJAG_002055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981260.1"
                     /translation="MNILSINNQNSTISLTQDEVFVLRAILNEIYAGVCVDSREFENV
                     SGVRKHEVDNLQQQFAGIYKKMTT"
     gene            1479..2219
                     /locus_tag="ACFJAG_002056"
                     /pseudo
     CDS             1479..2219
                     /locus_tag="ACFJAG_002056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713004.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
BASE COUNT          800 a          442 c          531 g          594 t
ORIGIN      
        1 atggtgttga aaaaaataaa gttcttcttt tggataaaga acttaaaaaa atatatgata
       61 cttgggataa atgttagcta gatagggtgg gcactcgttg cccacctttt gccgtatatt
      121 aaaaatcctt ttcaggctgc ctgaaactgg gtgggcatca atgccaatcc taactgtgcg
      181 gatgaagcag gaaaactgat atgggaagac gaccccgata aaaattggcg ggctaaccgt
      241 atggacgata ttcgcggcat cgtccaaggt gcggttaatc cttttttaac gggttttcag
      301 ggattgggag ttggggcaat tacagacagt gcggtaagcc cggtaaccta tgcggcagca
      361 cggaaaactt tacagggtat tcacgattta ggaaatttaa gtccggaagc acaacttgct
      421 gccgcgagcc tattacagga cagtgccttt gcggtaaaag acggcatcaa ttccgccaaa
      481 caatgggctg atgcccatcc gaacattaca gctactgccc aaactgccct tgccgtagca
      541 gaggctgcag gtacggtttg gggcggtaaa aaagtagaac ttaacccggc caaatgggat
      601 tgggttaaaa ataccggcta taaaacacct gctgttcgca ccatgcatac tttggatggg
      661 gaaatggccg gtgggaatag accgcctaaa tctataacgt ccaacagcaa agcagatgct
      721 tccacacaac cgtctttaca agcgcaacta attggagaac aaattagtag tgggcatgct
      781 tataacaagc atgtcataag acaacaagaa tttatggatt taaatatcaa ttcaccagca
      841 gattttgctc ggcatattga aaatattgtt agccatccaa caaatatgaa agagttacct
      901 cgcggtagaa ctgcgtattg ggatgataaa acagggacaa tagttatccg agataaaaat
      961 tctgacgatg gaggtacagc atttagacca acatcaggta aaaaatatta tgatgattta
     1021 taggaaaaag ccatgaatat actatccata aataatcaaa actcaactat ttcactaact
     1081 caagatgaag tttttgtttt acgagctatc ttgaatgaga tatatgcggg cgtatgtgta
     1141 gattcaagag aatttgaaaa tgtatctggt gttagaaaac atgaagtaga taatttacaa
     1201 caacagtttg ctggaattta taaaaaaatg acaacttaac aacccaaatt tttgtcagag
     1261 cctagtgcaa attacaacta tgattctatt gtagccgaaa tgaaagaaaa aaatcatggg
     1321 ttggcgacag ggttgatgtt gttaatatgc ctgatggagc acccactagc agccgtagat
     1381 cggattctcg aatccgacat tttccaacag cggcatctcg gaaacgatag gcgcgtcaaa
     1441 tatttttgtc ggatacaaat aaatatccga cctacatttc tgcgcagcaa actttacagg
     1501 gtattcacga tttaggaaat ttaagtcccg cagcacaact tgcggctgca accgcattac
     1561 aagacagtgc ctttgcggta aaagacggca tcaattccgc cagacaatgg gctgatgccc
     1621 atccgaatat aacagcaaca gcccaaactg cccttgccgt agcagaggct gcaggtacgg
     1681 tttggggcgg taaaaaagta gaacttaacc cggccaaatg ggattgggtt aaaaataacg
     1741 gttataaaaa acctactgcc cgccatatgc agactaaggc gttaggtacg gtagatgaaa
     1801 ttggcaatac agtacagcag gttgggaaac agactagcgg acaaaaaacc agcggtggta
     1861 atcctgcgat tgatagcgac ccctatagcc cgagtagtgt gtcagctcgt atagaagccg
     1921 gtaaggtgcg cagtgattta caaatcaaag acattttgag caatactact caaaggagta
     1981 aaacaaaagg tcccgctgtt cagtatgata aagtggggga ttacaatgac gcactaaatg
     2041 attttaatag tctgaatgtt cgaaatgtac aaacacgtcc taatggaacg ataacgggca
     2101 atttacctga tgggcgtgcg gttaatgttc gtaatgatag cagtggtgga gaaccaacac
     2161 ttgaaataac aattagtaat aaccgaaaaa taaaaatcag atatggaaat acacgataaa
     2221 ttatgaaatt aaaaagctta gatttcccaa ctggctattt ctattttgat aatgcagcaa
     2281 taaactttga taaagtagaa gttatagcag ttggttatag aaatacgggt aaaaccataa
     2341 aaatttctat tgaggatgtt attcatt
//
LOCUS       DAXFZM010000141         2307 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.143, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000141 DAXFZM010000000
VERSION     DAXFZM010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2307)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2307)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2307
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.143"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            172..366
                     /locus_tag="ACFJAG_002057"
     CDS             172..366
                     /locus_tag="ACFJAG_002057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HFC3981261.1"
                     /translation="MDSEYLDPQQCADILSVKKRTFLERYAPRPDFPARISVSKKRFW
                     WKKEEVEGWLDRQKEKRPVM"
     gene            complement(422..506)
                     /locus_tag="ACFJAG_002058"
     tRNA            complement(422..506)
                     /locus_tag="ACFJAG_002058"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(470..472),aa:Leu,seq:tag)
     gene            657..1331
                     /locus_tag="ACFJAG_002059"
     CDS             657..1331
                     /locus_tag="ACFJAG_002059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981262.1"
                     /translation="MPAALIKDFLLTQGLKLPLDEVRAAYLTAQTVMDMGMASIDRSV
                     LWCNDEGWKLADYLPCDDVREDALKRLFMALDSVFSRSTGVRSAAVYALMPSENAALR
                     LVCLSQQGEGLENIWEQDGNITDVSLACRSAQSGWMNVASDVRRWLNLGELSGERNHA
                     SAAQISIPVCTESGGVLGVVHVEFECAECADTAAQAEWVALALALSEPLKQLLGITAA
                     EGDENV"
     gene            1324..1917
                     /gene="ribA"
                     /locus_tag="ACFJAG_002060"
     CDS             1324..1917
                     /gene="ribA"
                     /locus_tag="ACFJAG_002060"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003935 - GTP cyclohydrolase II activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HFC3981263.1"
                     /translation="MSELLDHVASCRLPTEWGVFTMHGFEEANGQEHVALTVGNCSDG
                     NPVLTRIHSECLTGDALFSRKCDCGPQLEAAMRAVQAEGRGIIVYLRQEGRGIGLINK
                     IRAYHLQEQGMDTVEANLALGLPVDARDFRLAQSIYEYLGIRSVKLLTNNPEKIQTLK
                     DAGINVVERIPLHVGENLENERYLQTKADKLGHLMSE"
     gene            2085..2267
                     /locus_tag="ACFJAG_002061"
                     /pseudo
     CDS             2085..2267
                     /locus_tag="ACFJAG_002061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239093.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
BASE COUNT          564 a          529 c          656 g          558 t
ORIGIN      
        1 aactgcgcct attgcaacaa accgcctgcc gcttcaaagc cgccctcgaa acggccgcgt
       61 ggaaacacta cgtccgcgcc atcaaagaat ccgagccggt accggatgcc gaagcgcgcc
      121 ggaagcggaa aaaacaggcg gcgtaaatat aattaagttt ggaggtttta aatggatagc
      181 gaatacctag acccgcagca atgcgcagat attttatccg taaaaaagcg tacattttta
      241 gagcggtacg caccgcgtcc ggatttcccc gcgcgaatat ccgtatcgaa gaaacgtttt
      301 tggtggaaaa aagaagaagt cgaaggatgg ctagaccgcc aaaaagaaaa acgcccggtg
      361 atgtgatttg caccacattt gcaccaagtg gcatataaca ttatgaaaga tataaaaatt
      421 ttggtgcgga cggagagact cgaactctca cacctctcgg cgccagaacc taaatctggt
      481 gcgtctacca atttcgccac gtccgcataa gggtggagat tatacagatt ttgtccgatt
      541 gcgcaaggct ttggacgtaa tagttgaggc ttatgctttg cagcggtaaa atccgctatt
      601 cgtccgcctg gcatcggaat cgggcggttt tttgttttta ttgacggaat ttgggtatgc
      661 ctgctgcttt gattaaggat tttctgctga ctcagggttt gaagctgccg cttgacgagg
      721 ttcgggcggc gtatctgacg gcgcagacgg taatggatat ggggatggct tcgattgacc
      781 gttctgtttt gtggtgcaat gatgagggtt ggaaacttgc cgattacctg ccgtgcgatg
      841 atgtccgcga agatgccctg aaacggcttt ttatggcttt ggattcggtg ttttcacgct
      901 cgacaggtgt gcggagcgcg gcggtttatg ccttgatgcc gtctgaaaac gccgccctcc
      961 ggctggtgtg cctgtcccaa cagggcgaag gtttggaaaa catatgggag caggatggaa
     1021 atattaccga tgtttcgctt gcctgccgtt cggcgcaaag cggttggatg aatgttgcct
     1081 cggatgtacg ccgttggttg aatttgggtg agctttcggg agaacgcaat catgcttcgg
     1141 cggcgcaaat ttccattccc gtttgcacgg agagcggcgg tgtattgggc gtggttcatg
     1201 tggaatttga atgcgcagag tgtgcggata cggcggcgca ggcggaatgg gtggctcttg
     1261 ccttggcttt gtccgaacct ttgaagcaac ttttgggcat cactgccgca gaaggagatg
     1321 aaaatgtctg aattattaga ccatgtcgct tcctgccgtc tgccgaccga atggggcgta
     1381 tttacgatgc acggttttga agaggcaaac gggcaggaac acgtcgcgct gaccgtcggc
     1441 aattgttcag acggcaatcc ggtgttgacg cgcatccact ccgaatgtct gacgggcgac
     1501 gcgctgttct cgagaaaatg cgactgcgga ccgcaacttg aagcggcaat gagggcggta
     1561 caggcagagg ggcgcggcat catcgtctat ctgcgtcagg aaggacgcgg catcgggctg
     1621 attaacaaaa tccgcgccta tcatctgcaa gaacaaggta tggataccgt tgaagccaat
     1681 ttggcactcg ggctgcccgt cgatgcccgc gatttccgtt tggcgcaatc tatctacgaa
     1741 tatctgggca tccgctcggt caaactgttg accaacaacc ccgaaaaaat ccaaaccctg
     1801 aaagatgcgg ggattaacgt ggtcgaacgc attcccctgc acgtcgggga aaatctggaa
     1861 aacgagcgtt atctccaaac caaagcagac aagctggggc atttgatgtc ggaataaggc
     1921 aaagttgcag ggaacgggca tcctgcgccg tctttcggga aacaggtttc catagcttga
     1981 taaagcaata agttttatca agttgcaggg tgcggatgca aacgcattgc gagcgcgggt
     2041 ttgaggcata cgcgcaaaca tcttaataca acgtattgat atttatgatt ttctctatca
     2101 tcgtccctat ttacaatgtg gaaaaatacc ttcgctgctg cgtggattcc gtgcttgccg
     2161 aaaattttgc cgattatgaa atgattttgg tcgatgacgg ttcgccggac ggctgcggga
     2221 agatttgcga cgaatatgca ggcaaatatc cgcatataag ggtaatccca tgcgtaacac
     2281 cgtaggattg gacatatcca agttgac
//
LOCUS       DAXFZM010000142         2254 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.144, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000142 DAXFZM010000000
VERSION     DAXFZM010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2254)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2254)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2254
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.144"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(88..501)
                     /locus_tag="ACFJAG_002062"
     CDS             complement(88..501)
                     /locus_tag="ACFJAG_002062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981264.1"
                     /translation="MIHLNVHYCDEIIRHAENDKYSLIGIFPDICHIPTPQAILGRLC
                     LSVSFSAEGMDIQTMKTGQIFLEIVRNDDVISALEIPSYDGSDTEENVSFMLHQTISG
                     LPVSDNDRIYVRMTTHNHILSESRPLSFSWLPYHS"
     gene            complement(498..959)
                     /locus_tag="ACFJAG_002063"
     CDS             complement(498..959)
                     /locus_tag="ACFJAG_002063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HFC3981265.1"
                     /translation="MGATLTVAVAACTVSTPTSAIPVTHIKCLRINGQIKCVKPISPN
                     TTPAAEHIEHVRKNPRRKAAMDRAAARIADKIALKAGGETFVSLRMKKGFTQSELATA
                     AGLPQPYLSRIENSKQSLQDKTVQKLANALGVSPLEVRAAFERRYEYMEQA"
     gene            complement(976..1413)
                     /locus_tag="ACFJAG_002064"
     CDS             complement(976..1413)
                     /locus_tag="ACFJAG_002064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981266.1"
                     /translation="MELTVHFNAEQDLDRLFEKDEEAVGYLENVIAMIQADSAIFDGL
                     YKNRYFREYGEPIGPIDLEVKPILSLWGKDIKVLRVRFDSEEAAGYRIIYAPCHEKQP
                     NGTYIRRIDILAVVNKKTDEFDYQAEHPITKRIIKDYEELYSN"
     gene            complement(1526..2242)
                     /locus_tag="ACFJAG_002065"
     CDS             complement(1526..2242)
                     /locus_tag="ACFJAG_002065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S24 family peptidase"
                     /protein_id="HFC3981267.1"
                     /translation="MPFIIDYQCLCAINSEIKMFSGEQLGQAISEAIKRKNVSQKEVA
                     DHFGVKQPSVSGWIKNGRIDKKHLDKLIDYFSDVVTPSHFGIETFRVLKSNEQSSIRF
                     PRLNAEATCGAGTINDHYIEVVDYVTVAAAWAREKLGGNLNKIQVITARGDSMEPTIE
                     NGDVMFVDTAVEAFDGDGLYLLWYIDGLKAKRLQSTVGGGLMIISDNSSYRTETVRGE
                     DLNAVRIIGRIRGAWRLSQF"
BASE COUNT          520 a          501 c          548 g          685 t
ORIGIN      
        1 tttttagaag aaaaaagttt gaaaaaaaac cgcccgaatg gcggtgtatc atgaaaaaga
       61 aaaccgccct agggcggttc ggtattgtta tgagtggtaa ggaagccaag aaaaagacaa
      121 aggacggctc tcggagagaa tatggttgtg tgttgtcatt cttacataaa tgcggtcgtt
      181 gtctgaaacg ggtagtccgc tgattgtttg gtgtagcatg aatgacacgt tttcttctgt
      241 atcactgccg tcatatgatg gaatctcaag tgcagagatt acatcatcgt tgcggacgat
      301 ttccagaaaa atttgaccgg ttttcatagt ctgtatatcc atgccttcgg cggaaaatga
      361 aacagacagg cacaggcggc ctagaatggc ctgcggtgtc ggaatatggc atatatcggg
      421 gaatatacct atcaggctgt atttgtcatt ttccgcatgg cggataattt catcgcaata
      481 gtggacattt aagtgaatca tgcctgctcc atatattcgt accgccgttc gaacgctgcg
      541 cgaacttcaa gcggggaaac gcctaatgcg tttgccaatt tttgtacagt cttatcttgc
      601 agggattgtt tgctgttttc gatgcgggac agatagggtt gaggcaatcc tgcggcggtt
      661 gccaattcgg actgggtaaa cccctttttc atccttaagc tgacaaatgt ttccccgcct
      721 gctttgaggg ctattttatc ggcaattctt gctgccgccc tgtccatcgc tgctttgcgg
      781 cgcggatttt tccgcacatg ctcaatatgc tctgcggcag gggtagtgtt agggcttatc
      841 ggtttgacgc atttaatctg cccgtttatc cgcaggcatt ttatgtgggt gacggggatg
      901 gcggatgtag gtgttgatac tgtgcaggcg gccacggcaa cagtgagtgt tgcacccatt
      961 ttgaaccatg tgccgttagt tggagtacag ttcttcatag tctttgataa tccgttttgt
     1021 gattgggtgt tctgcctgat agtcaaattc gtctgtcttc ttgtttacaa cagccaatat
     1081 atctatgcgg cggatatacg tgccgtttgg ctgtttttca tggcatggtg cgtaaattat
     1141 tctgtatccg gcggcttctt cgctgtcaaa tcggacgcgt aaaactttga tgtcttttcc
     1201 ccataatgac aatatgggtt tcacttccaa gtcaatcggg cctatgggtt cgccatattc
     1261 cctgaagtat ctgtttttgt ataagccgtc aaaaatagca gagtccgcct gaatcatcgc
     1321 aatgacattc tcgagataac cgaccgcttc ttcgtctttt tcaaagaggc ggtctaaatc
     1381 ctgctcggcg ttaaagtgga cggtcagctc catgagtgcc ctttttatat atatattata
     1441 tctttttagt tataccgcgc aatatgcggt aataaatcag ttgttcaagt attttaatcc
     1501 ggcacgctcc accagaagac gcggtctaga actggctcaa acgccatgcg ccgcgtatgc
     1561 gtccgatgat gcgtacggcg tttaaatctt cgccgcgcac ggtttcggtt cggtatgagc
     1621 tgttgtcgct gatgatcatc aggccgccgc cgacggtgga ttgcagccgc ttggccttaa
     1681 ggccgtctat ataccaaagc aggtagaggc cgtcgccatc gaaggcttcg acggcggtat
     1741 caacgaacat tacgtcgccg ttttcgatgg tgggctccat gctgtcgcca cgggctgtaa
     1801 tgacttggat tttgttgagg tttccgccca gtttctcccg cgcccatgcg gcagcgacgg
     1861 ttacataatc cacaacctcg atatagtggt cgttaatcgt gcctgcgccg caggtcgctt
     1921 cggcatttaa gcgggggaaa cgtatgctac tttgttcatt cgattttaag actctgaatg
     1981 tttcaatgcc gaaatggctt ggcgttacta cgtctgagaa ataatcaatt aatttatcta
     2041 gatgtttttt atctattcgt ccatttttta tccaacctga aacgcttggc tgtttcaccc
     2101 caaaatgatc ggcaacctcc ttttgactga cattttttct cttaatcgct tctgatattg
     2161 cttgtcctaa ctgttcgcct gaaaacattt tgatctccga attaattgcg cataagcatt
     2221 ggtaatcgat aataaaaggc ataacctata aaag
//
LOCUS       DAXFZM010000143         2176 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.145, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000143 DAXFZM010000000
VERSION     DAXFZM010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2176)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2176)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2176
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.145"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..1488)
                     /locus_tag="ACFJAG_002066"
     CDS             complement(<1..1488)
                     /locus_tag="ACFJAG_002066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Z1 domain-containing protein"
                     /protein_id="HFC3981268.1"
                     /translation="MLRTYLNQLTPPELADSVKNTVDGFMEKLSQTEPKIAQNVLLLG
                     NVQSGKTAQVLGVLSALADDGDHKVFLYLTTDSVDLQDQTVKRAKANLKNFIVLSEAD
                     DRSFMEVMKAENPILVVIKKNARVLKRWRNLFASQSSLKGYPLVIVDDEADAASLNTN
                     SDKPAKDASTINKLLNDIKNSCCQSLFIQLTATPQSLLLQHEESDWQPEFIHFFEAGE
                     KYIGGNFVFSDPPSYIVRFIDSELDDMKDESGEIAEGAKQALLSFLITCAEFALCDKA
                     NCNFALHPSYKIQDHQAFSKKIQAFLNDLVQAVNNGEDLAGSFKESYLDLQKTKPDIH
                     HFDEIYEKLTALLENKQISTLVVNSQTETDFDLEKGFNIIIGGNVIGRGLTIPKLQTV
                     YYSRTAKKPNADTFWQHSRIFGYDRDKSLLRLYIPFDVYYFFVQLNQANNLIIGQAKN
                     SGGNIQVIYPKNINPTRKNVLKFDSINQIVGGVNYFPLHPNEDNLS"
     gene            complement(1489..>2176)
                     /locus_tag="ACFJAG_002067"
     CDS             complement(1489..>2176)
                     /locus_tag="ACFJAG_002067"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="restriction endonuclease PLD domain-containing
                     protein"
                     /protein_id="HFC3981269.1"
                     /translation="GLIGSANLTCFWDSTERTYETMLHLNGKPAQILQADIQSTIHKL
                     GKNIQEVERPSKFIEHNSHLENCLGVQKIAPEQIRQLFAQTSEYHFSIPAKTEEKSNL
                     NVFFGEGRRDKRGFVKPRPWYEVELIVSKDITSQEGYPVLKSFTVITDDGWQFQCKTS
                     GDYSKNFRSENDLKTLGKWIKGRLESHGCLQNNEKITHETLREYGNDHFELRSTDNPD
                     VWLLSFKGKN"
BASE COUNT          631 a          436 c          396 g          713 t
ORIGIN      
        1 cgataaatta tcttcgtttg ggtggagtgg aaaataattc acaccaccca caatttgatt
       61 gatactatcg aatttcaata cattttttcg agttggattg atatttttcg gataaataac
      121 ctgaatattg ccgcctgaat tttttgcctg cccaataatc agattatttg cttgattgag
      181 ttgtacaaag aagtaataga catcgaacgg aatataaagc cgtaataatg atttatcgcg
      241 gtcatatcca aaaatacgcg aatgttgcca gaaagtatct gcattcggtt ttttggcagt
      301 gcgactataa taaaccgttt gtagtttcgg aatagtcaag ccacgaccaa tcacattacc
      361 accaataatg atgttgaaac ctttttctaa gtcaaaatct gtttctgtct gcgagttaac
      421 gacaagagta gagatttgtt tattctctaa aagtgctgtc aatttttcgt atatttcatc
      481 aaagtgatga atatcgggct tggtcttttg caaatccaaa taactttctt taaagctacc
      541 tgcaaggtct tccccattat tgactgcttg cactaagtca tttaaaaagg cttggatctt
      601 ctttgaaaag gcttgatgat cttgaatttt atagcttgga tgtagtgcaa aattacagtt
      661 agccttatca catagcgcga attctgcaca ggttattaga aaactaagca atgcctgttt
      721 tgctccttcg gcaatttcac cactttcgtc tttcatatca tccaattcgc tatcaataaa
      781 acgaactata tagcttggtg gatcagaaaa gacaaagttg ccgccgatgt atttttcgcc
      841 tgcttcaaag aagtggataa attcaggttg ccaatcagat tcttcatgtt gtaataaaag
      901 cgattgaggc gtggcagtca actggataaa caggctttga caacaggaat ttttgatgtc
      961 gtttagcagt ttattgatag tactggcatc tttagccggc ttatcagaat tagtatttag
     1021 gctggcagca tcggcttcat cgtccacaat aaccaaagga tagcctttca ggctactttg
     1081 actggcaaac aaattacgcc aacgtttcaa tacacgggca ttctttttaa tcacgaccaa
     1141 gatggggttc tctgccttca ttacttccat aaaacttcgg tcgtcagctt cagacaatac
     1201 gataaagttt ttcagattgg ctttggctcg tttgactgtt tgatcctgta aatctacgct
     1261 gtcagtagta agatacaaaa aaactttgtg gtcgccatca tcagccagcg cacttaatac
     1321 acccaaaacc tgtgccgttt tgccactttg aacattgccc agcaataaaa cattttgggc
     1381 gattttcggc tcggtttgtg acaatttttc cataaaacca tcaacggtat ttttaacaga
     1441 atcagctaat tcgggagggg tcaattggtt caagtaggtt cgcaacattt agtttttccc
     1501 cttaaatgag agcagccaaa catcaggatt atcggttgaa cgtaactcaa aatgatcgtt
     1561 accgtattcg cgtagggttt catgcgtaat cttctcgtta ttttgcaggc agccatgact
     1621 ttccaaacga cctttaatcc atttaccaag tgtctttaaa tcattttctg agcggaagtt
     1681 tttggagtaa tcccccgatg tcttgcattg aaattgccaa ccatcatcgg taataactgt
     1741 aaaagacttc agaaccggat acccttcttg tgaagtgatg tctttggata caatcaactc
     1801 tacttcatac caaggtcgtg gtttgacaaa ccctcgttta tctcgtcgac cttctccaaa
     1861 aaatacattc aaattacttt tttcttcggt tttagctgga attgagaaat gatattctga
     1921 cgtttgggca aataattgcc gaatctgttc tggtgcaatt ttctgaacac ccaaacaatt
     1981 ttctaaatgg ctattatgtt caataaattt acttggtctt tcaacttctt ggatattttt
     2041 gcctagctta tgaatagtac tttgaatatc tgcctgcaaa atctgtgcag gcttaccgtt
     2101 caaatgcaac atagtttcat aagtacgttc cgtgctatcc caaaaacacg ttaagttagc
     2161 agaaccaatt aatcca
//
LOCUS       DAXFZM010000144         2040 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.146, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000144 DAXFZM010000000
VERSION     DAXFZM010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2040)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2040)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2040
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.146"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            25..1372
                     /locus_tag="ACFJAG_002068"
                     /pseudo
     CDS             25..1372
                     /locus_tag="ACFJAG_002068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215773.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor domain-containing
                     protein"
     gene            1417..1707
                     /locus_tag="ACFJAG_002069"
     CDS             1417..1707
                     /locus_tag="ACFJAG_002069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981270.1"
                     /translation="MNIQLQGHIVGVKKFNGQIEGKSFDYCRLIVATPLDSSQGNALG
                     SSTTEYDFGGSANFEQFRNTQFPIEANLNVEIVTTGKTQKLKVTGFQFVKKG"
     gene            1712..1909
                     /locus_tag="ACFJAG_002070"
     CDS             1712..1909
                     /locus_tag="ACFJAG_002070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981271.1"
                     /translation="MQKVYVVQSVSTGDFLYLSPETGDIGHTKLITNADYFYDFEEAV
                     NAGLEEIGNQCEFVVFGFLKD"
BASE COUNT          612 a          461 c          485 g          482 t
ORIGIN      
        1 ttgcccgttt ttgaggattc gcaaatggga gataagcaag ggatgacaaa ggaggttgcc
       61 ggcgtgatga cggaggcgcc ggcggacggc aggaagccgg caaccgcttc gaatcttccc
      121 ccccccctta tctaacaggg ggggtacaga aaccgaaacg gcgggcaggg ttcaggaagt
      181 cttcgaatgt tacgaaacgt acataacgga cggtaaagga aacctgttag gcgttcctct
      241 taggcgcggt gtatcagatt cggctttcat tgaccaaatc acattttcaa ttcatgaaga
      301 cacgtttttc catgtttatg gactttcgtt tgatttgttc gatgatgacg atttcatacg
      361 cgcggcttcc gccaagatgg aggaaatttt cggattcgga atcattgaaa aagccaagca
      421 ttcgggcggg cgtttctatg aaggctgctg gctgatggga acggaaaatg cccaatacgg
      481 gcgcgtccat tacggcggcc aacgtgaaac gatgttggtt gaattgacgg cggtaggctg
      541 caatgctgca aatattggat gggaatcaag gctttttgat tttctgacaa atgcgattcg
      601 tccaaaaata acgcgcgttg acattgcaaa agactttttc aacggagagt acagcccgaa
      661 tcaggcaaga gaagaccgca ataaaggttt gtttacgtgc catcacgtca aaccgaaggg
      721 cgagtgtctt ggttctgatt gggaggaaga agacgaagcc aaaatgacga gcggcaaaac
      781 ctacggcata ggttcgcgtg agtcttcaaa atatgtacga atctatgaaa aaggcaagca
      841 gcttggcgat aaaacaagca catggacgcg ctttgaaatc gaattcaaag cgaaagacat
      901 cgttatccct ttcgaagttt tgcagaatcc gggcgaatat ttcggcggcg catatcccat
      961 ttgcgaacga ttcgcccaaa aggcaacgcg catacacgcg gttaaggaag ataaggttgt
     1021 ttcagccgac cgctgccttg aatgggtaaa aaaacagttc ggacgtgcgg caaacggtct
     1081 gaaattcatt tttcccgaat tggacaaagc caaactgttt gaactgattg agccgagtca
     1141 tcacaagctg cccaagtctt tggctcccga agcctacgac tgcgcctttt tgaaatctca
     1201 agtcattcat gaacagcccg cattcaaacc gtacaatgac ccttattata tgtacgaata
     1261 ttacgagaat cttgaaaaac agcttgaaca gcaaaaacac gtcaacaatg aagaaagcta
     1321 taacaacttc atttacgaca aattcgcaag actaccgatt tcatgggctt aaagtgtctg
     1381 cccgaaagac gtttaatcac acaaggaaac caaaaaatga acatccaact tcaaggccac
     1441 atcgtcggcg ttaaaaaatt caacggacaa atcgaaggca agagcttcga ctattgccgc
     1501 ctgattgtcg ccacaccctt agacagctcc caaggcaacg cattgggcag ctctactact
     1561 gaatacgatt tcggcggctc tgccaatttc gagcagttcc gaaacaccca atttccgatc
     1621 gaagcaaacc tgaacgtgga aatcgtcact acgggcaaaa ctcaaaaact gaaagtcacc
     1681 ggttttcaat tcgttaagaa aggctgattg aatgcagaaa gtctatgttg tccagtccgt
     1741 atcaacaggg gactttctgt atctctctcc tgaaacgggc gacatcggac ataccaaatt
     1801 aattaccaat gccgattatt tctacgactt cgaagaagcg gttaacgcag gtttggaaga
     1861 aatcggcaac caatgcgaat ttgtcgtatt cggatttttg aaagactgat tttcggatgt
     1921 tcggcggtcg tctgaaaaac tctccatcca ttaccgccaa acactttttg aaggaaaata
     1981 tcatgaaatt tattaacacc tgccgtaaat acggcgcaaa actggctgtt gtaacagccg
//
LOCUS       DAXFZM010000145         2034 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.147, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000145 DAXFZM010000000
VERSION     DAXFZM010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2034)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2034)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2034
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.147"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..286
                     /locus_tag="ACFJAG_002071"
     CDS             <1..286
                     /locus_tag="ACFJAG_002071"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981272.1"
                     /translation="SALPTMAVASKVNLDMSNPTVLRMGLPLYIQNLCSLILLNFTNK
                     KTARLFSSSNFKFVVCSGRTVSAKGSYSFAVSDFIWVAGFGKDSCCDPNV"
     gene            complement(584..943)
                     /locus_tag="ACFJAG_002072"
     CDS             complement(584..943)
                     /locus_tag="ACFJAG_002072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981273.1"
                     /translation="MIHKPRYIKIVDENGDFTRVLRLHKFPDTSKVFYFEPMFWLKDG
                     RVARKDSLFEVDYIYGADGCGFLPSNLTEFRKYCRKKHQKFKDDEVLVNRYAVDFLGA
                     KEPPYDDRHVTSVKYFV"
     gene            complement(1064..>2034)
                     /locus_tag="ACFJAG_002073"
     CDS             complement(1064..>2034)
                     /locus_tag="ACFJAG_002073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="zonular occludens toxin domain-containing
                     protein"
                     /protein_id="HFC3981274.1"
                     /translation="DRPLYFCHIDGLDKRKFNARELAEGQIMSAPLRDVIPEGAVLIV
                     GEAHYTYPVRAAGRPVPPYIQELTELRHHGHTVILMTRHPSQLDIFVRNLVSKHVHLE
                     RKAIGMKQYYWYKCVTSLDNPAGVSGVEAANWKPPKEAFKYYKSASRHQKFKKKVPWA
                     VWALIAVVGFVGWKSYGMFQVYSKATDSRIEQEAQKESVVQTMTEQTASSETAPFEHS
                     DNLKPEDFVPTLPEKPESKPIYNTVRQVKTFEQIAGCIDGGKSDCTCYSNQGTPLKEI
                     TKIMCKEYVKNGLPFNPYKDERQRTEQAAQSAKADKPQVLVMGGKS"
BASE COUNT          471 a          495 c          449 g          619 t
ORIGIN      
        1 ttcggcattg ccgacaatgg ccgttgcgtc aaaagtcaac ttggatatgt ccaatcctac
       61 ggtgttacgc atgggattac ccttatatat tcagaatctg tgttctttga tactactcaa
      121 tttcacaaac aagaaaaccg cccgcctatt ctcgtcatca aactttaagt ttgtggtttg
      181 ttcaggccgg acggtttcgg caaagggtag ctattccttt gccgtgtctg attttatttg
      241 ggttgcaggt tttggtaaag attcctgttg cgacccgaat gtctgatttt ttttgggcgt
      301 atctcagtcc ggaatcactc cgttagtggg tttgcggtat tgaaaaacag ttcataaaaa
      361 aggaaaaggg ggtattcgta aagattgggt aacgcaccca atctttacaa agcttccccc
      421 ttttcctttt ttccgcccta ttttcctgca cgtacaaccc ccgaacgaag cgattccgga
      481 ctgagatacg cccaaaaaaa aacagccatt ctagcagtta acccccttcg ctccgcccaa
      541 gccatcctga ggggtagtgg ctgaatttgt gattttggtt ttatcaaaca aaatatttga
      601 ctgaagtcac atggcggtcg tcatatgggg gttccttcgc acccaaaaaa tcgaccgcgt
      661 aacggtttac taaaacttca tcgtccttaa acttttggtg ctttttccgg caatattttc
      721 tgaactccgt taaatttgac ggcaagaacc cgcaaccgtc tgcaccgtaa atgtaatcaa
      781 cttcaaacaa actgtctttc cgggcaaccc gaccatcttt aagccagaac ataggctcga
      841 aataaaaaac tttcgacgtg tccgggaact tatggagacg gagaacacgt gtgaaatccc
      901 cgttttcatc tacaattttg atatatcttg gtttgtgaat catgacatcc tcagatttag
      961 tattcagaat atgattttaa aaagaacttt ctgctttacg actccgccgc cgattccttc
     1021 aaacggtttt ccgcgctctt cagttgtcgt acattaaatt ttattaggac tttccgccca
     1081 ttacgagaac ttggggcttg tccgctttcg cggactgtgc cgcctgttcc gtcctttgcc
     1141 gttcgtcctt gtaaggattg aaaggcaacc cgtttttcac atattcttta cacattatct
     1201 ttgttatttc tttcaagggt gttccttgat ttgaatagca tgtgcaatct gattttccgc
     1261 cgtctatgca tccggcgatt tgctcaaagg tttttacttg tcggactgtg ttataaatag
     1321 gcttgctttc gggcttttcg ggcaaagtcg gcacaaagtc ttcaggtttc agattgtcgg
     1381 aatgctcaaa aggcgctgtt tctgatgatg ccgtctgctc cgtcatcgtc tgcacaacgc
     1441 tttctttttg cgcttcctgc tcaatccggc tgtctgtggc tttgctgtaa acttgaaaca
     1501 tgccgtaact tttccagcct acaaacccta caaccgcaat caacgcccaa accgcccaag
     1561 gcactttttt cttgaacttt tggtgccggc ttgcggattt atagtatttg aaggcttctt
     1621 taggcggttt ccaatttgcg gcttctacgc cgctcacgcc cgcgggattg tccaacgagg
     1681 ttacgcattt ataccaataa tactgtttca tgccgattgc cttgcgttca aggtgtacat
     1741 gctttgaaac aaggttgcgg acgaatatat caagttggct cgggtgccgc gtcatcaaaa
     1801 tgacggtatg cccgtgatgg cggagttctg tcagttcctg aatatagggc ggaacgggac
     1861 ggcctgccgc gcgtaccggg taagtgtagt gcgcttcgcc aacaatcagc accgcgcctt
     1921 ccggtatgac atcacgaagc ggggcggaca tgatttgccc ttccgccagt tcgcgggcat
     1981 tgaattttcg tttgtccaat ccgtcgatat ggcagaaata aagcggccgg tctg
//
LOCUS       DAXFZM010000146         1947 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.148, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000146 DAXFZM010000000
VERSION     DAXFZM010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1947)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1947)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1947
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.148"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..134
                     /locus_tag="ACFJAG_002074"
     CDS             <1..134
                     /locus_tag="ACFJAG_002074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017147145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="opacity family porin"
                     /protein_id="HFC3981275.1"
                     /translation="AGVGIDITPKLTLDAGYRYHYWGRLENTRFKTHEASLGMRYRF"
     gene            148..342
                     /locus_tag="ACFJAG_002075"
     CDS             148..342
                     /locus_tag="ACFJAG_002075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981276.1"
                     /translation="MPSEPSDGIFDAPAVYRRGAGAVKYPNRHSRQHRNLETRHSRAG
                     GNPDLSGFAQIGRRRDGVAD"
     gene            299..501
                     /locus_tag="ACFJAG_002076"
                     /pseudo
     CDS             299..501
                     /locus_tag="ACFJAG_002076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360925.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            590..1159
                     /gene="rsmD"
                     /locus_tag="ACFJAG_002077"
     CDS             590..1159
                     /gene="rsmD"
                     /locus_tag="ACFJAG_002077"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052913 - 16S rRNA
                     (guanine(966)-N(2))-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HFC3981277.1"
                     /translation="MAAGKHTKHSNRVRIIGGQCRGRKLSFASADGLRPTPDSVREKL
                     FNWLGQDLTGKTVLDLFGGSGALGMEAASRNAKRVVIADNNRQTVQTLEKNSRELGLG
                     QVQTVCSDGIAYLANLKEKFDVVFLDPPFAWQSWESLFNVLGTRLNDGAYVYIEAGRQ
                     PDKPDWLTGYREGKSGQGTFELRVFQVAE"
     gene            1282..1533
                     /locus_tag="ACFJAG_002078"
     CDS             1282..1533
                     /locus_tag="ACFJAG_002078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhL family 4Fe-4S dicluster ferredoxin"
                     /protein_id="HFC3981278.1"
                     /translation="MSLFITDECINCDVCEPECPNDAISQGEEIYEINPNLCTQCVGH
                     YDEPQCQQVCPVDCILIDEEHPETHDELMAKYEKIIQFK"
     gene            1630..1713
                     /locus_tag="ACFJAG_002079"
     tRNA            1630..1713
                     /locus_tag="ACFJAG_002079"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1664..1666,aa:Tyr,seq:gta)
     gene            1744..1817
                     /locus_tag="ACFJAG_002080"
     tRNA            1744..1817
                     /locus_tag="ACFJAG_002080"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1776..1778,aa:Gly,seq:tcc)
     gene            1827..1901
                     /locus_tag="ACFJAG_002081"
     tRNA            1827..1901
                     /locus_tag="ACFJAG_002081"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1859..1861,aa:Thr,seq:ggt)
BASE COUNT          528 a          464 c          507 g          448 t
ORIGIN      
        1 tggcaggcgt aggcatcgac atcacgccca agctgaccct ggacgccggc taccgctacc
       61 actattgggg acgcctggaa aacacccgct tcaaaaccca cgaagcctca ttgggcatgc
      121 gctaccgctt ctgattcccc gattccgatg ccgtctgaac cttcagacgg catttttgac
      181 gcgcccgccg tttacaggcg cggggcgggc gcagtaaaat acccgaaccg tcattcccga
      241 caacaccgta atctcgaaac ccgtcattcc cgcgcaggcg ggaatccgga tttgtcggga
      301 ttcgctcaaa tcgggcggcg gcgggatggt gttgcagatt aacgatgtgg ataccaacag
      361 cggggaattt gcaatctata ccgctcagga tgcatcggta aagctggatt tgttaaaaat
      421 ggaattgaaa cactgcaaag aaatgttgga acaaaagaca aagaaatcga gttgctccgc
      481 aagctgaccg aaaccgtcta aacagatatg ccgtctgaaa aaagttttca ggcggcatat
      541 tcttcgacag gtcttgtata ataccgtttg aactttcagg cttttgatta tggcggcagg
      601 caaacatacc aaacacagca accgggtacg cattatcggc gggcaatgcc ggggcaggaa
      661 attgagtttt gcatccgccg acggactgcg cccaaccccc gacagcgtgc gtgaaaagct
      721 gtttaactgg ctgggacagg atttgacggg aaaaacggtt ttggatctct tcggaggcag
      781 cggcgcactc ggcatggagg cggcatcgcg taatgcaaaa cgggtcgtga ttgcagacaa
      841 caaccgtcaa acggtgcaaa cccttgagaa aaacagccgc gaactgggtt tggggcaggt
      901 gcaaaccgtc tgttcggacg gcattgccta tttggcaaac ctaaaagaga aattcgatgt
      961 cgtcttcctt gatccgccgt ttgcgtggca aagttgggaa agtcttttca atgtattggg
     1021 cacacgcctg aatgacggcg catatgttta tatcgaggca ggcaggcagc cggacaaacc
     1081 tgattggctg acgggatata gggaggggaa gtcggggcag ggtacatttg aattaagggt
     1141 tttccaagtg gctgaataat atgcgctttg ataatcattt ccgggttgta aacattcgtt
     1201 tgcaaccgtc cggttcaaaa aaaccttgtg ctataatccg cgcccgcccg gttttgataa
     1261 tttagtggaa aaggaaaaga aatgtcgctt tttattaccg acgagtgcat caactgcgac
     1321 gtatgcgaac ccgaatgccc caatgatgcc atttcccaag gcgaggaaat ttacgaaatc
     1381 aaccccaacc tctgcacgca gtgcgtcgga cactacgatg agccgcagtg ccagcaggtt
     1441 tgcccggtgg actgcatcct gattgacgaa gaacatcccg aaacccatga cgagttgatg
     1501 gcgaaatacg aaaagattat ccagtttaaa taaattcttt ttaaaacatc aaattatgtc
     1561 tgttttgaaa taaaatcaaa aaaaaacttg acggaaaagc aagccgctaa taaactagtg
     1621 ttctcttttg gagggattcc cgagcggtca aagggggcag actgtaaatc tgttgcgaaa
     1681 gcttcgaagg ttcgaatcct tctccctcca ccaaaattct tacttggggc agtagcgagt
     1741 aatgcgggtg tagctcaatg gtagagcaga agccttccaa gcttacggtg agggttcgat
     1801 tcccttcacc cgctccaaac aattaggccc atgtagctca ggggtagagc actcccttgg
     1861 taagggagag gtcggcagtt caaatctgcc catgggcacc atctctcgat tattcatttc
     1921 tttaaggctt agatatatag gatattg
//
LOCUS       DAXFZM010000147         1924 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.149, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000147 DAXFZM010000000
VERSION     DAXFZM010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1924)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1924)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1924
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.149"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            267..1046
                     /locus_tag="ACFJAG_002082"
     CDS             267..1046
                     /locus_tag="ACFJAG_002082"
                     /EC_number="1.18.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004324 - ferredoxin-NADP+ reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP reductase"
                     /protein_id="HFC3981279.1"
                     /translation="MAASPEAKFTEEKILWVKHHTPKLITFAISRPESYRFKAGQFSR
                     LGFYEGKGFIWRAYSVVSAEYADTLEYFAVLIQDGPMSALFAKMQQGDTILLDKNATG
                     FLLPERFPDGKDLVMLCTGSGIAPFLSILEQPEIRQRFDTVNLIHSVSFPEELIFNDR
                     LAALSEHPLVGEYGHSFRFVPVTTRAANPSGLSGKRIPELLKNNSIEQALHTKLTPES
                     TRFMICGNPEMVKDTFQTLLDMGYAMHRNRIPGQIMMENGF"
     gene            1255..>1924
                     /locus_tag="ACFJAG_002083"
     CDS             1255..>1924
                     /locus_tag="ACFJAG_002083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HFC3981280.1"
                     /translation="MAAHNKLTQKQIEAAKADGKQSKLADGGGLYLLLHPNGSKYWRM
                     RYRHGGCEKTLALGVYPAVSLKQARELARAVRAQTAAGIDPVAERRRTRPGSGRSLPE
                     IARAWYGSRQGQRADNTLEGDRRSLAYLTDYYKDNTDINDITTAGVSKFIEHLNRINI
                     PACARRTVQILAQIWDYAVQRGIITDERRNPATTARPLLNTSKPKPQPHIRPDELPDF
                     YRALQ"
BASE COUNT          566 a          626 c          384 g          348 t
ORIGIN      
        1 gcaagatgca acttttaaaa aagaaaaatt acattctttt gatagatatt tttattatta
       61 taaacctata aactgtaggc cgaaactttt gtaaaactgt ccatactcat taccgcctag
      121 tcggtaatgc attttttagt agtatttgaa aaagtatgat gataaaaacg gttaagccta
      181 actttttcat aaaatccagc agagtaaggc agaaaaaaac acccaaattg gctataatcc
      241 cgacaaacac actcaaggac aacaacatgg cagcctcgcc cgaagcaaaa ttcaccgaag
      301 aaaagatttt gtgggtcaaa caccacacgc cgaaactcat cactttcgcc atcagccgtc
      361 ccgaatccta ccgttttaaa gccggacagt tctcccgact cggtttctac gaaggtaaag
      421 gctttatttg gcgtgcctat tccgtcgttt ccgcagaata tgccgacacg ctcgaatatt
      481 ttgccgtact catccaagac ggccccatgt cggccctttt cgccaaaatg caacagggcg
      541 acaccatcct gctcgataaa aatgccactg gctttctcct gcccgaacgc ttccccgacg
      601 gcaaggattt ggtgatgctc tgtaccggct cgggcatcgc ccccttcctt tccattctcg
      661 aacaacccga aatccggcag cgtttcgata ccgtcaacct gatacattcc gtatcttttc
      721 ccgaagaatt gattttcaac gaccggctgg ccgcattgtc cgaacatccc ctggtaggcg
      781 aatacggaca ctcgttccgt ttcgtccctg ttaccacccg tgccgccaac ccctcgggct
      841 taagcggaaa acgcattccg gaactcttaa aaaacaacag catcgaacag gcgctgcata
      901 ccaagctcac cccggaatcc acacggttta tgatttgcgg taacccggaa atggtcaaag
      961 acactttcca aacgctgctc gatatgggtt acgccatgca ccgcaaccgc attcccggtc
     1021 aaatcatgat ggaaaacggc ttctaaaaac gaacgctccc aacccctacc cacgcccaca
     1081 cacaaaacaa aataaaaaac agcgatatac aaaaaccaat ttgcaaaaac agacctcacg
     1141 cctatactgc cactcacagc aagcaacaca aaaaagcggg tacaaattag ggtacaaaac
     1201 acaagcccga acacagaagc accccaacca aacccaaagg caaaggcaaa caaaatggcg
     1261 gcacacaaca aactgaccca aaaacaaata gaagcagcca aggcagacgg caaacaaagc
     1321 aagctggccg acggcggcgg cttatatctg ctgctgcacc ccaacggcag caaatactgg
     1381 cggatgcgct accggcacgg cggatgcgaa aaaaccctag ccttgggcgt atatcccgcc
     1441 gtcagcctca agcaggcccg cgaacttgcc cgcgccgtcc gggcgcagac cgccgccggc
     1501 atcgaccccg tagccgaacg ccgccgcacc cgtcccggca gcgggcgcag ccttcccgaa
     1561 atcgcccgcg cgtggtacgg cagccgtcaa gggcaacgcg ccgacaacac actggaaggc
     1621 gaccgccgtt cactcgccta cctgaccgac tactacaaag acaacaccga catcaacgac
     1681 atcaccaccg ccggcgtatc aaaatttatc gaacacctca accgcatcaa catccccgcc
     1741 tgcgcccggc gcaccgtcca aatcctcgcc caaatatggg actatgccgt ccagcgcggc
     1801 atcattaccg acgaacggcg caaccccgca accaccgccc gcccactgct aaacacaagc
     1861 aaacccaaac cccagcccca catccgcccc gacgagttgc ccgactttta ccgcgccctc
     1921 caaa
//
LOCUS       DAXFZM010000148         1843 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.150, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000148 DAXFZM010000000
VERSION     DAXFZM010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1843)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1843)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1843
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.150"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..649
                     /locus_tag="ACFJAG_002084"
     CDS             <1..649
                     /locus_tag="ACFJAG_002084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HFC3981281.1"
                     /translation="GVNKEIKGKKLSLWAKRENGSVKWFCGQPVKRDAGADDDAVKAD
                     GNEKIETKHLPSTCRDTSSAGCTKTPEYYLNHGKWPENNDEAGVASSSSIKGKYVKQV
                     EVKNGVVTAQMASSNVNKEIKDKRLSLWAKRENGSVKWFCGQPVKRADKANDTVADAA
                     GKDNGINTKHLPSTCRDKSSAGCTKHHLRLSIKIPKPSFPRTYIPSFPRKRESGT"
     gene            706..1104
                     /locus_tag="ACFJAG_002085"
                     /pseudo
     CDS             706..1104
                     /locus_tag="ACFJAG_002085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981065.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
     gene            1456..>1843
                     /locus_tag="ACFJAG_002086"
     CDS             1456..>1843
                     /locus_tag="ACFJAG_002086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017147169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HFC3981282.1"
                     /translation="MPAGILKHRPKKSAVAGYCLNHGIWPKDNTSAGVASSSSIKGKY
                     VKEVKVENGVVTATMNSSGVNKEIQGKRLSLWGRRENGSVKWFCGQPVKRAKAANDDA
                     VTDDTTGNGNEKIETKHLPSTCRDKHD"
BASE COUNT          555 a          523 c          433 g          332 t
ORIGIN      
        1 cggcgtaaac aaagaaatca aaggcaaaaa actctccctg tgggccaagc gtgaaaacgg
       61 ttcggtaaaa tggttctgcg gacagccggt taagcgcgac gccggcgccg acgacgacgc
      121 cgtcaaagcc gacggcaacg aaaaaatcga aaccaagcac ctgccgtcaa cctgccgcga
      181 tacgtcatct gccggttgca caaaaacacc cgaatattac ctgaatcacg gcaaatggcc
      241 ggaaaacaac gacgaggccg gcgtggcatc ttcttcatca atcaaaggca aatatgttaa
      301 gcaagttgaa gtcaaaaacg gcgtcgtcac cgcccaaatg gcttcaagca acgtaaacaa
      361 agaaatcaaa gacaaaagac tctccctgtg ggccaagcgt gaaaacggtt cggtaaaatg
      421 gttctgcgga cagccggtta agcgcgccga caaagccaac gacaccgttg ccgacgccgc
      481 cggcaaagac aacggcatca acaccaagca cctgccgtca acctgccgcg ataaatcatc
      541 tgccggttgc acgaaacacc acctacggct ttctataaaa atacctaaac cgtcattccc
      601 acgaacctac atcccgtcat tcccacgaaa gcgggaatcc ggaacgtaaa atctaaagaa
      661 accgttttac ccgataagtt tccgtaccga cagacccgga ttcccgcccg cgcgcaagtt
      721 tccgaagcca tccttttggc cgaaggtcaa aaatcagccg ttaccgagta ttacctgaat
      781 aacggcatat ggccggaaaa caacgcttct gccggcgtgg catcctccgc cgccgacatc
      841 aaaggcaaat atgttgaaag cgttacggtc gcaaaaggcg tcgttaccgc ccaaatggct
      901 tcaagcaacg taaacaatga aatcaaaggc aaaaaactct ccctgtgggc caagcgtcaa
      961 gacggttcgg taaaatggtt ctgcggacag ccggttaagc gcaccgccaa caacgacgac
     1021 accgttgccg ccgacggcac cgacggcaaa gacaaaatcg aaaccaagca cctgccgtca
     1081 acctgccgcg ataaatcaac tgccgtttgc acgaaacacc acgcgccgat ttcaaacact
     1141 tccaaaaaat cagccgttgc cgggtattgc ccgaatcacg gcacatggcc gaaaaacttc
     1201 gtcattcccg cgaaagcggg aatccaggtc tgtcggcacg gaaacttatc gggtaaaaag
     1261 gtttctccgg tcctgagtcc tggattccca ctttcgtggg aatgacggta tatcggtttc
     1321 cgttcggaca aatgtctgcg caggaataaa tggccgcgtt tgaattctcg gttaattcca
     1381 tttattagcc gcttgcttct gtttgcatga aagccgggat tattgaataa aatacatttg
     1441 cacggccggt taggtttgcc cgccggaata ttaaaacacc gcccaaaaaa atcagccgtt
     1501 gccgggtatt gcctgaatca cggcatatgg ccgaaagaca acacttctgc cggcgtggca
     1561 tcttcttcat caatcaaagg caaatatgtt aaggaagtta aagtcgaaaa cggcgtcgtc
     1621 accgccacaa tgaattcaag cggcgtaaac aaagaaatcc aaggcaaaag actctccctg
     1681 tggggcaggc gtgaaaacgg ttcggtaaaa tggttctgcg gacagccggt taagcgcgcc
     1741 aaagccgcca acgacgacgc cgtcaccgac gacaccaccg gcaacggcaa cgaaaaaatc
     1801 gaaaccaagc acctgccgtc aacctgccgc gataaacatg atg
//
LOCUS       DAXFZM010000149         1766 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.151, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000149 DAXFZM010000000
VERSION     DAXFZM010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1766)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1766)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1766
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.151"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..249
                     /locus_tag="ACFJAG_002087"
     CDS             <1..249
                     /locus_tag="ACFJAG_002087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="opacity family porin"
                     /protein_id="HFC3981283.1"
                     /translation="TAVTTYPQNGQPSVTTGGPTKKPAHHESRSISSLGFGAVAGVGI
                     DITPNLTLDAGYRYHNWGRLENTRFKTHEASLGMRYRF"
     gene            484..780
                     /locus_tag="ACFJAG_002088"
     CDS             484..780
                     /locus_tag="ACFJAG_002088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981284.1"
                     /translation="MQADLAYAYEHITRDYPEATGANQGKISTVSDYFKNIRTRSVHP
                     RLALGYDFGGWRVFSAPAVAAGLHQSLQYYRSRHCRRFRQIHQFRRITPIPQKP"
BASE COUNT          406 a          550 c          444 g          366 t
ORIGIN      
        1 actgctgtta ccacttaccc acagaatggt cagccaagtg ttaccacagg tggtccgacc
       61 aaaaaacctg cccatcacga aagccgcagc atcagcagct tgggcttcgg cgcagtggca
      121 ggcgtaggca tcgacatcac gcccaatctg accctggacg ccgggtaccg ctaccacaac
      181 tggggacgct tggaaaacac ccgcttcaaa acccacgaag cctcattggg catgcgctac
      241 cgcttctgat tccccgattc cgatgccgtc tgaaccttca gacggcattt ttaaggcgca
      301 agatcgggca aacggcattt tcagacggca taactgacag tataatccga acatccggcc
      361 gctttcgcgc ggccttcagc attatccgat tttttccgaa agccgaacca tgcaatacaa
      421 acccctcctg ctcgccctga tgcttggcag gcggcgggtg aagaccatgg gcgcggcccg
      481 tatgtgcagg cggatctggc ttacgcctac gagcacatca cccgcgatta tcccgaagca
      541 accggtgcaa accaaggcaa aataagcacg gtaagcgatt atttcaaaaa catccgcacc
      601 cgctccgtcc acccccgact cgccctcggc tacgatttcg gcggctggcg cgtcttttcc
      661 gcccccgccg ttgccgccgg cctccaccaa tcccttcaat attaccgatc ccgccattgc
      721 cgccgattcc gtcaaatcca tcaattccgc cgaatcacgc ctattcccca aaaaccttga
      781 tgcggcgggc tgaagcccgc cctgcaaccc tctctatgca cccccttgcg agcccgacac
      841 tacgcaacat cttgagaacc catcctgtca agaatacccg aaccgtcccg atacaccgta
      901 atcctaaaac ccgccattcc cgcgcaggcg ggaatccagt ccgttcggtt tcagtcattt
      961 ccaaaaattg ccgtagcgtt aagtttctag attcccactt tcgggggaat gacgcggtgc
     1021 aggtttccgt gcggacggat tcgtcattcc cacacagaca ggaatccgga tttgtccgcg
     1081 cggaaactta tgcgccgtca ttcccgcaca ggcgggaatt caggtctgtc ggcataggaa
     1141 cttatcggat aaaacggttg ccccaaccct gcgttctaga ttcccacttt cgcgggaatg
     1201 acggttcagg tattcctaat agcaacccgc cacaacccac ctacgcccat cctacgcatc
     1261 tgccatacag ccctgttccg gagcgcgcgg ataaggtgcg atgccgccgg cgggcatcat
     1321 agtcctctct ccctgtggga gagagctaga aagctgcaag gcttgtattt tagaagacta
     1381 agggatttgg gaaagattgt cgaaattcag ggagccctct ctcccacggg ggagggggca
     1441 ggttgcggca gatttggcgg ttgcaggcgg tttgaaaaac agattggatt tacaaccgtt
     1501 gatttcaggt cgtctgaaaa gcaaaaagca gcctgcacaa cctgattagt ttacaaaacc
     1561 cttaacccca acagcctccc cgtcctctct ccccgtggga gagggctgga gagagggcaa
     1621 caagccgcaa ggcttgtatt ggggcggtta agctgttggg aaaggttgcc gcaacttgga
     1681 gaatgccctc tccccggccc tcccccacgg gggagggagt gggtttcggc agatttttcg
     1741 gttgcaggcg atttgaaagg caactt
//
LOCUS       DAXFZM010000150         1709 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.152, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000150 DAXFZM010000000
VERSION     DAXFZM010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1709)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1709)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1709
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.152"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..1341
                     /gene="xseA"
                     /locus_tag="ACFJAG_002089"
     CDS             <1..1341
                     /gene="xseA"
                     /locus_tag="ACFJAG_002089"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HFC3981285.1"
                     /translation="HSDVLSVSELNAFAKSILENHLAGLWIAGEVSNLTRAASGHYYF
                     SLKDSRAQVRCAMFKGAAARLAQPLKEGDHIEVAGKISIYEARGEFQITVNEVRLKGL
                     GQLYEAYERLKAQLQAEGAFAAERKKPLPVRPQCIGIVTSLAAAALRDVVTTLKRRAP
                     EIPVIVYPAAVQGAGSGFQIAQAIKTASQRAECDVLIVCRGGGSIEDLRAFNEEPVVR
                     AIEACTIPVVSGVGHETDFTLADFVADVRAPTPTGAAELVSPNRQESLHRLVQAQGRL
                     KTVLEQRYFDASQKLDWLARQIRHPRQKLDEQRASIGKLAQTLSYSMTQNLRAHTARF
                     ERQTQALQHCRPDVSVYRQDIVRLQTALPAAFSRLLARRRQSLTAQAALLEAVSPQHI
                     LERGFSVVKNTRGQVIRNADVLKQGQKLHITFSDGETDVRVSKEQGQQDLFDCI"
BASE COUNT          413 a          507 c          457 g          332 t
ORIGIN      
        1 cattctgacg tgttgtccgt ttccgagttg aacgcatttg ccaaaagtat tttggaaaac
       61 caccttgccg gcctgtggat tgcgggcgaa gtgtccaatc tgacccgcgc cgccagcggg
      121 cattattatt tctcactcaa agacagccgc gcgcaggtgc gttgcgcgat gttcaagggt
      181 gcggcggcgc gtttggcgca acctttgaaa gaaggcgacc atatcgaagt ggcgggcaaa
      241 atcagtattt acgaggcgcg gggcgaattt cagattaccg taaacgaagt acggctcaaa
      301 ggtttggggc agctttacga agcctacgag cggttgaagg cgcagttgca ggcggaaggc
      361 gcgtttgcgg cggaacgcaa aaaacctttg cccgtccgtc cgcaatgtat cggcatcgtt
      421 accagtctgg cggcggcggc tttgcgcgat gtcgtaacca ccttgaaacg ccgcgcgccc
      481 gaaatccccg tcatcgttta tccggccgcc gttcagggcg cgggcagcgg gtttcagatt
      541 gcccaagcga ttaaaaccgc atcgcaacgc gccgaatgcg atgtgctgat tgtctgtcgc
      601 ggcggcggca gcatcgaaga cttgcgggcg tttaacgaag aaccggtcgt gcgcgccatc
      661 gaagcctgca cgattcccgt cgtcagcggc gtgggacacg aaaccgattt cacgctcgcc
      721 gatttcgttg ccgacgtgcg cgcgcccacg ccgaccggcg cggcggaact ggtcagcccc
      781 aaccgccaag aatcactgca ccgcctcgtc caagcccaag gccgtctgaa aaccgttttg
      841 gagcaacgct atttcgatgc cagccaaaaa ctcgactggc tcgcgcggca aatccgccac
      901 ccgcgccaaa aacttgacga gcagcgcgct tcaatcggca agctggcgca aacgctgtct
      961 tactcgatga cgcaaaacct ccgcgcccac accgcccgtt ttgaacgcca aacccaagcc
     1021 ctgcaacatt gccgtcctga tgtttccgtt taccggcaag atatcgtccg ccttcagacg
     1081 gcattgcccg ccgccttcag ccggctgctc gcccgtcgcc gtcaaagcct gaccgcccaa
     1141 gccgcattgc tcgaagccgt ttcgccgcag cacattctgg aacgcggctt ctccgttgtc
     1201 aaaaatacac gcggacaagt catccgtaac gctgatgttt tgaagcaggg gcagaagctg
     1261 cacattacct tctccgacgg cgaaaccgac gtgcgcgtaa gcaaagaaca agggcagcag
     1321 gatttgttcg attgcattta aacccaatcg gaaaaaccgc tccccctccg ccgtcattcc
     1381 cgcgaaagcg ggaatccagt cccttgacct taagataatc tttaattcgt cattcctgca
     1441 aaagcgggaa tccggaagcg gaaagccgcc ggggtttatc agaaatgact gaaactcaaa
     1501 aaacggattc ccgcctgcgc gggaatgacg attgatacgt ttcgataatt tattgaagat
     1561 ggctgaaatt caaagttaca gaaatttata aacaaaaaaa cagcaacctg ccgccgtcat
     1621 tcccgcgaaa acgggaatcc agtccctaaa aagcgggaat ccggaagcgg aaagccgcag
     1681 gaatttgtcg gaaaaaacag aaacctctc
//
LOCUS       DAXFZM010000151         1515 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.153, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000151 DAXFZM010000000
VERSION     DAXFZM010000151.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1515)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1515)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1515
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.153"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(1..162)
                     /locus_tag="ACFJAG_002090"
     CDS             complement(1..162)
                     /locus_tag="ACFJAG_002090"
                     /inference="COORDINATES: protein motif:HMM:NF017472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981286.1"
                     /translation="MALGTSANASNFGISLGKSSAASGTKGIAVGTSSQATNLSAVAI
                     GTESKAQNK"
     gene            469..792
                     /locus_tag="ACFJAG_002091"
     CDS             469..792
                     /locus_tag="ACFJAG_002091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD hydrolase family protein"
                     /protein_id="HFC3981287.1"
                     /translation="MVSDLGGTLLTPEHLVGDLTIDTLRVLEQKGVDIILATGRNHTD
                     MSSILGKIGAERAVMITSNGARVRDLQGNLLYSNSLPEELVLELYKTSYVGNLIQIPR
                     FCRHQ"
     gene            746..1399
                     /locus_tag="ACFJAG_002092"
                     /pseudo
     CDS             746..1399
                     /locus_tag="ACFJAG_002092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248375.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004730 - pseudouridylate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01621 family pseudouridine synthase"
BASE COUNT          457 a          314 c          314 g          430 t
ORIGIN      
        1 ctatttattt tgtgccttac tttcagtacc aattgccacc gcacttaaat ttgttgcctg
       61 agaagatgtc cccactgcaa ttcctttcgt accactggca gcactgcttt tccctaagga
      121 aataccaaaa ttcgatgcat tagcagaagt acccaatgcc actcaatttt agatgccgat
      181 gctttatcgt tccatgataa ggagccatta ttaccttctt gtaaagtaga atccgcccca
      241 taagaagaca aagcactcat taacaaaata ccagccgcta tcgcggacga cctatataca
      301 taacattact tcatatcatt tcattcagta tcaatagtat aggataactc ccccccccgt
      361 caatcgaaat aattcccgta ttttaatgtc gtattgttcc tgtatattta gtgatgtgat
      421 aagtatagtt tattttttga ggtttttatg aatttacctt ttcgggcaat ggtgtctgat
      481 ttaggtggca cacttttaac acctgaacat ttagtgggtg atcttaccat tgatactctg
      541 agagtattag agcaaaaagg cgtagatatt attttggcaa caggacgcaa tcataccgat
      601 atgtcatcca ttcttggaaa aatcggtgcg gaacgtgcgg ttatgattac atcaaacggt
      661 gctcgtgtac gggatttaca gggtaatttg ctttatagca atagtttgcc tgaagaatta
      721 gttctcgagc tttacaaaac atcatatgtg ggaaatctta ttcagatacc aagattttgt
      781 cgccatcaat aaacctcaag gcatatccgt ccaccgttcc ggcggcgaag tcagtctgac
      841 ggcaacactt gcggcacagt tgggcgtaga aaaggtatgg ttgctgcaca ggttggacaa
      901 gcaggccgga ggcatattgc tgtttgccct taatccccaa agtgccgctg ttcttgccgc
      961 acagtttgcc gaaaggaaaa tgaagaaaac ctatttggct ttgtccgacc gcaaaccgtc
     1021 caaaaaacaa ggatggataa aaggcggcat ggaaaaatcc aggcgcggga tgtggaagct
     1081 gacgcgcaat atggaaaata ttgccgttac ccggtttttc agtatccgca tcagtgaaaa
     1141 aatgcggctg ttcatccttg agccacatac gggtaagaca catcagttga gggtggtaat
     1201 gaagagtctg ggcagctcta tatttgggga cagcctgtat ggaggaacag aatccgaaac
     1261 tatgttcctg tatgcgtgaa aaatacaatt tacctatcaa caacaagaaa tcgaaattac
     1321 cgcacctttg aaaaatgcat ggcaggccga aaatatctct catgcactgg aagaatttta
     1381 tatggcaaaa gcaggttaat agatataaat caattaaaac aatatgataa atatttttat
     1441 aaaatttttt caaaaaacgg ttgaccgcaa atctctttaa gcgtatagtt cagttcgtcc
     1501 gtcgctgccg aagcg
//
LOCUS       DAXFZM010000152         1486 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.154, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000152 DAXFZM010000000
VERSION     DAXFZM010000152.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1486)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1486)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1486
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.154"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            69..1193
                     /locus_tag="ACFJAG_002093"
     CDS             69..1193
                     /locus_tag="ACFJAG_002093"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003886 - DNA
                     (cytosine-5-)-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HFC3981288.1"
                     /translation="MLSKQISNLNSSSNKPKILSLFSGCGGLDLGFHQAGCETVWAND
                     FSHWACESFRKNIGDVIVEGDIEQINPNDPTIPDCDIILGGFPCQDFSMIWKQPGLEG
                     ERGNLYKSFLRFVNAKKPKVFVAENVKGLLTANKKKAIQQIITDFENCGYYVQAKLYN
                     FAEFGVPQFRERVLIVGVRLDTGFDFRHPEPTHNETGENGLKPYVTAGQAISNIPQNA
                     SNNELLKISDKTRRMLELIPEGGNFTDIPKDHPLYVKGMISHVYRRMHRNEPSKTIIA
                     AGGGGTWGYHFPEPRAFTNRERARLQSFPDDFEFVGSTTEVRRQIGNAVPPQGVVELA
                     KSILPIFSDNYEKVDLHEKLVEEKEILFHDRLSKIRGGKQ"
     gene            1190..>1486
                     /locus_tag="ACFJAG_002094"
     CDS             1190..>1486
                     /locus_tag="ACFJAG_002094"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease PLD domain-containing
                     protein"
                     /protein_id="HFC3981289.1"
                     /translation="MNTVFSNIANAKITEKSLNAVWMDLFKSADEVLMATGYVSNDAV
                     VELHKILELNDHIQKIDLLVGMHYLEGFSHLQYDSLCKLNDFLRHEKRGAVYVSP"
BASE COUNT          467 a          262 c          313 g          444 t
ORIGIN      
        1 agagcatagt tcacctttaa aatccataca aggattttta tcaaatttat gcataggagt
       61 gaaatcctat gctatctaaa caaatctcaa atcttaattc ttctagtaac aaaccaaaaa
      121 tcctatctct attttcagga tgtggcggtt tggatttggg ctttcatcaa gctggttgtg
      181 aaactgtttg ggcgaacgat ttctcccatt gggcttgcga aagtttccgt aaaaatatcg
      241 gcgatgtcat cgtagaaggt gatattgaac aaattaatcc gaatgatcca actattcccg
      301 attgcgacat cattttaggc ggattccctt gtcaagattt ttccatgatt tggaaacagc
      361 cgggcttaga gggtgagcgc ggcaatcttt ataaaagctt tttacgtttt gtaaatgcaa
      421 aaaaaccgaa agtttttgtt gctgagaatg tgaaaggttt attgactgcc aacaagaaaa
      481 aagccatcca gcaaattatt accgactttg aaaattgcgg ttattacgtt caggcgaagc
      541 tgtataactt tgcagaattt ggcgtacctc aatttcgtga acgtgtgctg attgtcggag
      601 tacgtttgga tacaggattt gattttcgcc atccggaacc gacgcacaat gaaactggcg
      661 aaaacggctt aaaaccatat gtaacagcag gtcaggccat atccaatatt ccacaaaatg
      721 ccagtaataa tgaattactg aaaatcagcg ataaaacacg ccgtatgttg gaattaattc
      781 ctgaaggtgg aaattttacc gatattccta aagatcatcc tttatatgtg aaaggtatga
      841 ttagccacgt ttatcgtcgt atgcatcgga acgagccatc aaaaacaatt attgcagcag
      901 gtggcggtgg tacttggggc tatcacttcc ctgaaccgcg tgcttttact aatagagaac
      961 gagcaaggct tcaaagtttt cctgatgatt ttgagtttgt cggatcaaca actgaagtac
     1021 gtcgccagat tggtaatgct gttcctcctc agggcgtggt tgaactggca aaaagcattt
     1081 taccgatttt ttcagacaac tatgagaaag tagatttgca tgagaaatta gtcgaagaaa
     1141 aagaaatttt attccatgac cgactaagca aaattcgagg gggaaaacaa tgaatacagt
     1201 tttttccaat atcgccaatg ccaaaatcac tgaaaaatct cttaatgcgg tttggatgga
     1261 tttatttaaa tcagcggatg aagtgttgat ggcgacaggt tatgtatcta atgacgcagt
     1321 ggttgagtta cataaaattt tggagctaaa cgatcatatt caaaaaatag atttattggt
     1381 cggaatgcat tatttggaag gttttagcca tttacaatat gacagcttat gtaaactaaa
     1441 tgattttttg cgacatgaga aaagaggagc cgtctatgtt tccccc
//
LOCUS       DAXFZM010000153         1449 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.155, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000153 DAXFZM010000000
VERSION     DAXFZM010000153.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1449)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1449)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1449
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.155"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..140
                     /locus_tag="ACFJAG_002095"
     CDS             <1..140
                     /locus_tag="ACFJAG_002095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="major capsid protein"
                     /protein_id="HFC3981290.1"
                     /translation="ANAALPETAKNALEAAKADGMEAGWIVVGVFAALFVFSIVKRVM
                     K"
     gene            147..425
                     /locus_tag="ACFJAG_002096"
     CDS             147..425
                     /locus_tag="ACFJAG_002096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981291.1"
                     /translation="MYCQVGNKCLEKHRAENLYFSLVVPRIKENGQIIRPEYNGSMWK
                     MSDGQPLRLSLAECSPKDNLQSGLETGRIVFGVLASVYFVSLLKKVLK"
     gene            553..870
                     /locus_tag="ACFJAG_002097"
     CDS             553..870
                     /locus_tag="ACFJAG_002097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1132 family protein"
                     /protein_id="HFC3981292.1"
                     /translation="MNKPFITQAQLALYKYQPSSKYFGQSMAFIAQKEFEEFVNNVKE
                     YDILESFSYFLNKRVAHNIWKIYFSDESVIFIRKSEENGKTVHEFVYQEYTDSSDFNS
                     MFE"
     gene            812..>1449
                     /locus_tag="ACFJAG_002098"
     CDS             812..>1449
                     /locus_tag="ACFJAG_002098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IgG-binding virulence factor TspB family
                     protein"
                     /protein_id="HFC3981293.1"
                     /translation="MNSFIKSTPIVLILILCSSNSYSEPVRLEKSQIKFQSSNNLKSI
                     GFKLDSSSNSFSKFTEAANFEHIPTGAKARINAKITASVSRAGVLSGVGKLVRQGAKF
                     GTRAVPYVGTALLAHDVYQTFKEDIQARGCRYDPETDKFVKGYEYANCLWYEDERRIN
                     RTYGCYGVDSSIMRLMPDRSRFPEVKQLMESQMYRLARPFWNWRKEELNKLSS"
BASE COUNT          441 a          290 c          337 g          381 t
ORIGIN      
        1 aggcaaacgc agcgttgccc gaaacggcaa aaaacgcttt ggaagccgca aaagcggacg
       61 gtatggaagc cggttggatt gtagtgggcg ttttcgccgc gctttttgta ttttccatcg
      121 ttaagagggt gatgaagtaa ggcggcatgt actgccaagt cggaaataaa tgtcttgaga
      181 agcaccgggc cgaaaacctt tatttcagct tggtagtacc aagaatcaaa gaaaacggac
      241 agataatcag gccggaatat aacggcagca tgtggaagat gtcggacggt cagccgctaa
      301 ggctttcatt ggcggaatgc agtccgaaag acaacctgca aagcggtctt gaaacaggcc
      361 ggatagtatt cggcgtcctc gcgtccgttt actttgtttc cctgctgaaa aaggttttga
      421 aatgatggat ttttatttct atctcggcgt tgccgtcccc gtattaatcg gggcggttct
      481 gtttaaggat tgagcgcatg aagttatggt gtcaaaatca ggctttcaaa acaacctttg
      541 aaaggcagaa ccatgaacaa gccgtttatc acgcaggcgc agttggcact ttataaatat
      601 cagccgtcaa gcaagtattt tgggcaatcg atggctttta ttgctcagaa agaatttgaa
      661 gaatttgtta ataacgtaaa agagtacgat attttagaga gcttctctta tttcttaaat
      721 aagagggtcg cacataatat ttggaagatt tatttttctg atgagtctgt tatttttata
      781 agaaaatcag aagagaacgg aaaaactgtt catgaattcg tttatcaaga gtacaccgat
      841 agttctgatt ttaattctat gttcgagtaa ttcttattct gaacctgtaa gattagaaaa
      901 atcacaaatt aaatttcaat caagtaataa tttaaaatca attggtttta aattagattc
      961 aagttctaac agtttttcca aattcacaga agcggcaaat ttcgagcaca tccccacggg
     1021 cgcaaaagcc cgaatcaacg ccaaaataac cgccagcgta tcccgcgccg gcgtattgtc
     1081 gggggtcggc aaacttgtcc gccaaggcgc gaaattcggc acaagggcgg ttccctatgt
     1141 cggaacagcc cttttagccc acgacgtata ccaaactttc aaagaagaca tacaggcacg
     1201 aggctgccga tacgatcccg aaaccgacaa atttgtaaaa ggctacgaat atgctaattg
     1261 cctttggtac gaagacgaaa gacgtattaa tagaacctat ggctgctacg gcgttgacag
     1321 ttcgattatg cgccttatgc ccgatcgcag cagattcccc gaagtcaaac aactgatgga
     1381 aagccaaatg tataggctgg cacgtccgtt ttggaattgg cgtaaagaag aactgaataa
     1441 attaagttc
//
LOCUS       DAXFZM010000154         1298 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.156, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000154 DAXFZM010000000
VERSION     DAXFZM010000154.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1298)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1298)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1298
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.156"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..258
                     /locus_tag="ACFJAG_002099"
     CDS             <1..258
                     /locus_tag="ACFJAG_002099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation inhibitor Maf"
                     /protein_id="HFC3981294.1"
                     /translation="PKPKPTNHAQQRKEEAKNDSHRSVGDSNRVVREGKQYLDSDTGN
                     HVYVKGDKVVILTPDGRQVTQFKNSKANTSKRVKNGKWTPK"
     gene            236..517
                     /locus_tag="ACFJAG_002100"
     CDS             236..517
                     /locus_tag="ACFJAG_002100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981295.1"
                     /translation="MGNGHQNNQSSLEKRIFYLEHSGQYLMICALSDYSQNKHTVVMA
                     NFLYPNEKMDWRNLDDLFNELVLEELQSSFMDWYPTIEKAISHHLEDFS"
     gene            573..1220
                     /locus_tag="ACFJAG_002101"
                     /pseudo
     CDS             573..1220
                     /locus_tag="ACFJAG_002101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017147002.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
BASE COUNT          455 a          237 c          269 g          337 t
ORIGIN      
        1 cctaaaccaa aaccaaccaa tcatgcccaa caaagaaaag aagaagctaa aaacgattct
       61 catcgaagtg tgggagattc caatcgtgtc gttcgcgaag gaaagcaata tttagattcc
      121 gacacaggaa accatgttta tgtaaaagga gataaagtgg ttattctaac tcctgatgga
      181 agacaggtaa ctcaatttaa gaactcgaaa gccaatacgt caaaaagggt aaaaaatggg
      241 aaatggacac caaaataatc aatcttcctt agaaaaaaga attttttatc tggagcattc
      301 ggggcagtat ctgatgattt gcgccctatc ggattactcc caaaataaac atactgtcgt
      361 tatggcgaat ttcctctatc caaatgaaaa aatggattgg agaaatttag atgatttgtt
      421 caatgagttg gttttagagg aattacagtc ttcatttatg gattggtatc caactattga
      481 aaaggcaatt agccatcatt tagaagactt ttcgtaacaa gcataaatca aaaagtcgtc
      541 tgaaactgct tttaattttc agacgacctt tccccatatc ggcggattat gaatttacag
      601 ctatcgggaa attgagttat ctctctgata gagaaaattc catacgcgaa gccgttgacc
      661 ggtggataca ggaaaatccc aatgccgccg aaaccgtcga agccgtcttc aacgttgccg
      721 ccgccaaagt cgcgaagctg gcaaaggcgg cgaaaccggg gaaagctgcg gttagcgggg
      781 atttttcgat tagctataaa aacttttcta ctgtcaaacc aaaagtaatt gccaaaggaa
      841 cgattaatgg aaagactttt agagatgtta atcaaagtgc aaaaattgga tcgcctgatt
      901 cacctacatt aatagcccaa cgagttaatg caaaaatcca agccgacggt aaacctcgtc
      961 cgaatgcaac cgttgctaat tcacatgctg aaattggtgt tatccagcag gcttataatg
     1021 caggtgaaac gaaaggggca tctatgacaa tgacagtttc aggaaaagat gtttgcggtt
     1081 attgtaaagg agatattgca gctgctgctc aagcttctgg actgaaatca ctgactgtta
     1141 atgcgacaga taatgtaaca ggaaaaaata aaacttacta ttggacgcct ggtatgaaat
     1201 caattaagga gagaaaatga aaacatcaac aattgttttt ggtggatttt ttattacaga
     1261 taatggagaa cgaatccaaa tccctatttt agaaaatc
//
LOCUS       DAXFZM010000155         1296 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.157, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000155 DAXFZM010000000
VERSION     DAXFZM010000155.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1296)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1296)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1296
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.157"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(243..1093)
                     /locus_tag="ACFJAG_002102"
                     /pseudo
     CDS             complement(243..1093)
                     /locus_tag="ACFJAG_002102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218621.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase subunit sigma"
BASE COUNT          279 a          301 c          367 g          349 t
ORIGIN      
        1 ccaccaacct caccggctca aaccggcaca gcaacttata tcccgtcatt ctcgcgcagg
       61 cgggaatcca gccccgccgg tacagaaact tatcgaaaaa aagtttcttc agattttacg
      121 ttctagattc ccactttcgc gggaatgacg ggatgcaggt ttccgcgcgg acggattcgg
      181 cattcccgct ttcgcagaaa tgtcggcttt tggtttgttg tctttataag attattcggt
      241 aattattctg cggttttgcg tttgtgtgct gccggaatct caagggattc tctgtatttg
      301 gcaacggtgc ggcgggaaac ctctataccg cggaaagcca gcaggttggc gagtgcctcg
      361 tcagaatagg acttgggcgt ggacgaggca aaaccggcgg cgggaaaggg gttgagcgaa
      421 gcaatgaggc cgagtgcggc ttcgagtgtg ccgctgtcgg tttggggcag gcgtttttta
      481 ttcgcgccgg ggtttggctg cggttgccgt caatgctgtc gagggcgttt cggacgatat
      541 gcagggcggc gggtttggca gcacattcgc ccgatctttc tatctgcaat atcaacgatt
      601 cggtcacatc ggcggcggcc atgcctgccg gatcgaattt tttcaatgcg gtcagggctt
      661 gtttcagcat tgcttcatcc aacatccact ccaagggcgt atggtccagg atgtcttcga
      721 tgctgtcggt caggtagccc tgctcgtcaa ggaaatcgat aaggatgtgg acgcaggcgg
      781 cttcttggtc ggaaaggggg tgttcgcacg cttgcgcgtg caggtattgc ttgaaatctt
      841 cttcgccggc gatgttggac agcatatctt cgccttcgtc tccgccgatt tgacgcgcgg
      901 gcgcggtgta atggctgaat tcggcatcgg aaaattcatc cgtttctttg cgttcgagca
      961 gggggttgtc cgacggccag ttttcgacct cgcgttcaag ttcgataccc ggcatctgca
     1021 atacgcgcaa agattgttgc agccgctggt cgagctgctg ggtctgtttg agctttattc
     1081 cgattaaggt aatgataatg cggtgaaaat tgttattttc agcctgtcgg cgcaaaaaaa
     1141 tgccgcaaag cgtcattgca ttataaatgg ttttaatgag cgggttcgga ttccgtccga
     1201 taacaaaaaa caaacgaaaa tggaaacttg attgcttata acaatattaa atcaatttca
     1261 tagttttaat aacgaaaatc ttggcgtata atcgca
//
LOCUS       DAXFZM010000156         1277 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.158, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000156 DAXFZM010000000
VERSION     DAXFZM010000156.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1277)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1277)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1277
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.158"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            7..>1277
                     /gene="mafB"
                     /locus_tag="ACFJAG_002103"
     CDS             7..>1277
                     /gene="mafB"
                     /locus_tag="ACFJAG_002103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 1"
                     /protein_id="HFC3981296.1"
                     /translation="MKPLRRLTNLLAACAVAAAALIQPALAADLAQDPFITDNTQRQH
                     YEPGGKYHLFGDPRGSVSDRTGKINVIQDYTHQMGNLLIQQAAIQGNLGYTVRFSGHG
                     HEEHAPFDNHAADSASEEKGNVDDGFTVYRLNWEGHEHHPADAYDGPKGGNYPKPTGA
                     RDEYTYHVNGTARSIKLNPTDTRSIRQRISDNYNNLGSNFSDRADEANRKMFEHNAKL
                     DRRGNSMEFVNGVAAGALNPFISAGEALGIGDILYGTRYAIDKAAMRNIAPLPAEGKF
                     AAIGGLGSVAGFEKNTREAVDRWIQENPNAAETVEALVNVLPFAKVKNLTKAAKPGKA
                     AVSGDFSKSYTCSFHGSTLVKTADGYKAIAHIQAGDRVLSKDEASGKTGYKPVTAQYG
                     NPYQETVYIKVSDGIGNSQTLISNRIHPFYSG"
BASE COUNT          342 a          427 c          312 g          196 t
ORIGIN      
        1 taaaccgtga aaccgctgcg cagactgaca aacctccttg ccgcctgtgc cgtagcggcg
       61 gccgcactca tacagcccgc cctcgcggcg gacttggcgc aagacccgtt cattaccgat
      121 aacacccaac ggcagcacta cgaacccggc ggcaaatacc acctcttcgg cgacccgcgc
      181 ggcagcgttt ccgaccgcac cggcaaaatc aacgtcatcc aagactatac ccaccagatg
      241 ggcaacctgc tcatccaaca ggcggcaatc caaggcaatc ttggttacac cgtccgcttt
      301 tccggacacg gacacgaaga acacgccccc ttcgacaacc acgccgccga cagcgcaagc
      361 gaagaaaaag gcaacgttga cgacggcttt accgtgtacc ggctcaactg ggaaggacac
      421 gaacatcatc ccgccgatgc ctacgacggc ccgaagggcg gcaattaccc caaacctacg
      481 ggcgcacgag acgaatacac ctatcacgtc aacggcacag cccgcagtat caaactcaat
      541 ccgaccgaca cccgcagcat ccggcaacgc atatccgaca actacaacaa cctcggcagc
      601 aatttctccg accgcgccga tgaagccaac agaaaaatgt tcgagcacaa tgccaagctc
      661 gaccgccggg gcaacagcat ggagtttgtc aacggcgtcg ccgccggcgc gctcaacccc
      721 tttatcagcg cgggcgaagc cttgggcata ggcgacatac tgtacggaac gcgctatgcc
      781 atagacaaag ccgcaatgcg caacatcgcc cccttgcccg ccgagggcaa attcgccgcc
      841 atcggcggct tgggcagcgt ggcgggcttt gaaaaaaata cgcgcgaagc cgttgaccgg
      901 tggatacagg aaaaccccaa tgccgccgaa accgtcgaag ccctggtcaa cgtcctgccg
      961 tttgccaaag tcaaaaacct gacaaaggcg gcaaaaccgg ggaaggctgc ggttagtggg
     1021 gatttttcta aatcctacac ctgctccttc cacggcagca ccttggtcaa aacggcagac
     1081 ggctacaaag ccattgccca tattcaagcc ggagaccgcg tcctttccaa ggacgaggca
     1141 agcgggaaaa caggatacaa acccgttacc gcccaatacg gtaatccgta tcaagaaacc
     1201 gtttacatta aagtttcaga cggcatcggc aacagccaaa ccctgatttc caaccgcatc
     1261 catccgtttt attcggg
//
LOCUS       DAXFZM010000157         1226 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.159, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000157 DAXFZM010000000
VERSION     DAXFZM010000157.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1226)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1226)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1226
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.159"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..185)
                     /locus_tag="ACFJAG_002104"
     CDS             complement(<1..185)
                     /locus_tag="ACFJAG_002104"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981297.1"
                     /translation="MGNTRIPIKSFFKQLVLFVFNIFLAYEILPDVQAESAAGCPVPD
                     CRGNGKTDVPCGFARMNG"
     gene            413..709
                     /locus_tag="ACFJAG_002105"
     CDS             413..709
                     /locus_tag="ACFJAG_002105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981298.1"
                     /translation="MRFKAEYARSKNDADDKRGNAHIANGAIGKMAAVYAGYTYTQPG
                     GESTRFRGGLERVQVKRYLGEKCCGYACPKSERFTLQADGEIRQNLGEGWFLKL"
     gene            706..945
                     /locus_tag="ACFJAG_002106"
     CDS             706..945
                     /locus_tag="ACFJAG_002106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981299.1"
                     /translation="MSGVAVYLRNKNRIAIASQDANLNSKGRFVSSGLNVGKQLTGSL
                     GVEFDPYYRHRAIRKSAEFVSNTTKTKTDSEKFNE"
BASE COUNT          366 a          336 c          249 g          275 t
ORIGIN      
        1 ccattcattc gggcaaaacc gcacggaaca tccgttttcc cgtttccacg acaatccggt
       61 acaggacacc ccgctgccga ttccgcctgc acatccggca aaatttcata cgcaaggaaa
      121 atgttgaaaa caaaaagaac taattgcttg aaaaaagatt taattggaat gcgggtattt
      181 cccacacttt ctccatttat ttatcctcat tataaaaaca tgaaaaaaaa cccctgcttg
      241 cactctcact tgcagccgtg tccgccgtta cggtagccga tattcccgag tctaacggca
      301 aaggcgaata caaagtcttt accgcttatg ttaaaggcaa agccactgcc ggcaatttga
      361 aagaaaaata acgcacaccg tccatcggtt ttcgttcaac gaacgccacg atatgcgttt
      421 taaggcagag tacgcccgaa gcaaaaacga tgcagacgac aaaagaggga atgcacacat
      481 cgctaacggc gcaataggca aaatggctgc cgtgtatgcc ggttatacct acacccaacc
      541 gggcggcgaa tccacacgtt tccgtggcgg tttggagcgt gtccaagtta aacgttatct
      601 gggagaaaaa tgctgcggct acgcctgtcc aaaaagcgaa cgcttcaccc tgcaagcaga
      661 tggtgaaatc cgtcaaaacc ttggcgaagg ctggtttctg aagctatgag cggggtggct
      721 gtctatctcc gcaacaaaaa cagaatagca attgcctccc aagatgccaa cctaaactcc
      781 aaaggccggt tcgtcagcag cggtctgaat gtgggcaaac aactgaccgg cagtctcggc
      841 gtagagtttg acccatacta ccgccaccgc gcaatccgca agtctgccga atttgtctcg
      901 aacactacca aaaccaaaac agacagcgaa aagtttaacg agtagggctt ccgcgtagcc
      961 gcaacgttct aattccctta cgtataaaaa gcagcataaa aatgctgcct tttcccattt
     1021 ccaagggaag tattccgtag tgcagcttac ctcattgttt cacacaaacc gaaaatgccg
     1081 tcttaaaacc aattttcaga cggcatttgt cccttaaaac acgttttttc aagcgcgacc
     1141 ataccaaaca cccacaggtt gccttccacc cttcgtacaa cctttgctcc atcaaacatc
     1201 cacttcctaa atactgatgt atactg
//
LOCUS       DAXFZM010000158         1218 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.160, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000158 DAXFZM010000000
VERSION     DAXFZM010000158.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1218)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1218)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1218
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.160"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            160..306
                     /locus_tag="ACFJAG_002107"
     CDS             160..306
                     /locus_tag="ACFJAG_002107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981300.1"
                     /translation="MSRIYLPLLFPPHIVERGLLYFQQDKVRDVQKISLGRYRAKVFD
                     SENY"
     gene            complement(683..1132)
                     /locus_tag="ACFJAG_002108"
     CDS             complement(683..1132)
                     /locus_tag="ACFJAG_002108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilin protein"
                     /protein_id="HFC3981301.1"
                     /translation="MTDNRGFTLVELISVVLILSVLALIVYPSYRNYVEKAKINAVRA
                     ALLENAHFMEKFYLQNGRFKQTSTKWPSLPIKEAEGFCIRLNGIARGALDSKFMLKAV
                     AIDKDKNPFIIKMNENLVTFICKKSASSCSDGLDYFKGNDKDCKLLK"
BASE COUNT          377 a          300 c          185 g          356 t
ORIGIN      
        1 tcggatatct tcaaatgcac atttcacaga aaggtcgtct gaaacccatt ttcagacgac
       61 ctttttccac ttcgcaaaac aagaattccc acccctctcc ccaaacatcg cccaaaccag
      121 taaattcccc atatttcaac aactccttgg aagcaaacca tgtcccgtat ctacctaccc
      181 ctcctatttc cgccccacat cgtcgaacgc ggccttttgt attttcagca ggacaaggtt
      241 cgcgatgtcc aaaaaatttc cttagggcgt tatcgggcga aggtattcga ttcggaaaac
      301 tattaggcat ggttgaagct ggatagtgat ttgtacatta aggacggggc tgcgattgcc
      361 cttatgtcta aaggtgcaaa catgccttaa attactaagc ctataacgaa ttggaaacaa
      421 aatgccgtct gaaaacatct tcagacggca ttataaaatc tgttcacctt ttcagatgag
      481 taatgtacac ccctatacaa tttttgctac catgcaccat aaatccacgg ctaaagataa
      541 ttgggtttat tcttttatcc agaaacaatc cagatacgga tcacgggtca taactatagg
      601 cttaatatta cacgattctc attccatcaa ggcggaaaac cgcacaaata ctgaaacact
      661 atcgatcgat ttgtaaacaa gcctacttaa gtaacttgca gtccttatca tttcctttaa
      721 aataatccag cccgtcacta cacgaactgg cggacttctt gcaaataaag gttactagat
      781 tttcattcat cttaataata aaaggatttt tatctttatc tatggctacc gccttcaaca
      841 tgaatttact gtctaaagcc ccgcgcgcga ttccattcaa acggatacaa aagccttctg
      901 cctctttaat cggcaaactt ggccatttgg tagatgtttg tttaaatctc ccattctgca
      961 gataaaactt ttccataaaa tgtgcatttt ctaacaaggc tgcccgcact gcatttatct
     1021 ttgctttctc aacataattg cgatagctcg gataaacaat taaagcaagt acagacaata
     1081 tcaagaccac tgatattaat tcaaccagcg taaacccccg attatcagtc attactttac
     1141 ttccaataag aacagattat tcaacatatt tctttgaaca gacttactat cccattcagc
     1201 agtatgcata tttcccac
//
LOCUS       DAXFZM010000159         1210 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.161, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000159 DAXFZM010000000
VERSION     DAXFZM010000159.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1210)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1210)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1210
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.161"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(1..225)
                     /locus_tag="ACFJAG_002109"
                     /pseudo
     CDS             complement(1..225)
                     /locus_tag="ACFJAG_002109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225727.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
     gene            complement(243..587)
                     /locus_tag="ACFJAG_002110"
     CDS             complement(243..587)
                     /locus_tag="ACFJAG_002110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981302.1"
                     /translation="MNLENYENILIKLLFHHNNLVNEYSYFIENKNLFKIVSRTKTSK
                     GFFFTIEKPLNFLSKKTYFEFNFKYLHSGKEHFGSFMCWINTNLMEFEGVFFNDPLPD
                     NMIINNFFEIND"
     gene            complement(986..>1210)
                     /locus_tag="ACFJAG_002111"
     CDS             complement(986..>1210)
                     /locus_tag="ACFJAG_002111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981303.1"
                     /translation="TFMDLISEDADRALLHENGGQSFFELLDERYAAWISKESYFPLN
                     REFFKYYIFMFEQTFIEIIGSSATYSIIES"
BASE COUNT          390 a          228 c          192 g          400 t
ORIGIN      
        1 gtcctgtaat aggctcgcgg cggcaagttg tgcttccgga cttaattttc ctaaatcatt
       61 aataccttgt agagtctgct gagcggctgt atctgtgacc gggcttactg cactgtctgt
      121 aattgcccca atccctactc cttgaaaacc cattaaaaaa ggattaaccg caccttggac
      181 gatgccgcga atatcatcca tacggttagc ccaccaattt ttattggttt attggtatat
      241 cgttaatcat ttatttcaaa aaagttattt attatcatat tatcagggag cgggtcgtta
      301 aaaaaaactc cctcaaattc cattaaatta gtatttatcc agcacataaa cgaaccaaag
      361 tgttctttcc ctgagtgtaa atatttaaaa ttaaattcaa aataagtttt tttgcttaga
      421 aaatttaatg gtttttctat agtgaaaaaa aagcccttac tcgttttagt tcgagatact
      481 attttaaata agtttttatt ctcaataaaa taagaatatt catttactaa gttgttatga
      541 tgaaaaagta attttattaa aatgttttca taattttcta ggttcatttc tagctcaatt
      601 taaaatgatt tcattgttgc cgtaccaatg cgaaatttac catcgacaaa atttcccttc
      661 actgatacag gtaccccatc gcagagatgt aggtcggata tttgtatccg acaaaaatat
      721 ttgacgcgtt tatcgtttcc gaaatgccgc tgttagaaaa tgtcggattc gagaatccaa
      781 cctacggcta tatccgtaaa gtctgaccat tgttcaatgc ggaaggcgcg aatattgcgg
      841 acggaatgta gaaaccaata tacttaattg ccatgccatt ctcatcaaaa tacctgtgct
      901 gtttaaagtg cgtggttcat tacacgagta attttatttt caggctgcct gaaagaaaga
      961 taggcaactt attactcatc ttacgctagc tctcaataat tgaatacgtt gcactagaac
     1021 caattatttc tatgaatgtt tgctcaaaca taaaaatata gtatttaaag aattctctat
     1081 tcaaaggaaa ataactttct ttcgatatcc atgccgcata acgctcatca agaagttcga
     1141 aaaaagattg accaccattt tcatgaagca aagctctatc tgcatcttcc gaaattaaat
     1201 ccataaaagt
//
LOCUS       DAXFZM010000160         1170 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.162, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000160 DAXFZM010000000
VERSION     DAXFZM010000160.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1170)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1170)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1170
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.162"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            176..652
                     /locus_tag="ACFJAG_002112"
     CDS             176..652
                     /locus_tag="ACFJAG_002112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981304.1"
                     /translation="MEANKFEVKSLSDLIKVFAGIAADFEAAMGVKRADISTEFDEPQ
                     HEPQPPVTVAEQKGINDFAIGKEVIIRTYSAGVWFGVLKQKAGNEVILTKARRMYSWW
                     AKESISLSGVARHGIRQDGSQICGELDSVWLEAIEIIPVTGGAAESIRTALEVAQS"
     gene            649..924
                     /locus_tag="ACFJAG_002113"
     CDS             649..924
                     /locus_tag="ACFJAG_002113"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981305.1"
                     /translation="MSYLDQPLKHGYGNGNGSGNGSGYGNGYGNGYGNGYGGVGGGGS
                     GSGYGNGNGYSNGSGNGDGDGNGNGSGNGSGYGNGYGNGYSNGSGNG"
BASE COUNT          339 a          283 c          352 g          196 t
ORIGIN      
        1 gccttttatt gaaagttggt gaaatctgcc gcgacgcagc agcgacatgg accactagaa
       61 aaagcgaaag catcaatcac accgccttca cttttacagt gaaaaaagac ggcttaaaag
      121 agaaggtaat gattgttttg taaagaaacc aaccccaccc cgaaaggaaa caaaaatgga
      181 agcaaataaa tttgaagtga aaagtttgtc agaccttata aaagtctttg caggcattgc
      241 tgccgatttc gaagcggcaa tgggtgtaaa acgcgccgac atttcaaccg aatttgacga
      301 accgcaacat gagccgcaac cgccggtaac agttgccgag caaaaaggta tcaacgactt
      361 tgccatcggc aaggaagtca tcatccgcac ttattcggca ggcgtttggt ttggtgtgtt
      421 gaaacaaaaa gcaggcaatg aagtgattct gacaaaagcg cgccgaatgt acagctggtg
      481 ggcaaaggaa tcaatcagcc tgtcaggtgt cgcacgacac ggcatcaggc aagacggcag
      541 ccaaatttgc ggcgagcttg attccgtatg gctcgaggcg attgagatta tcccagtaac
      601 aggcggcgcg gctgaatcaa tccgcaccgc gctggaggtc gcccagtcat gagttatcta
      661 gatcaaccat tgaagcacgg ctacggcaac ggcaacggta gcggcaacgg tagcggctat
      721 ggcaacggct acggcaacgg ctacggcaac ggctacggcg gcgtcggcgg cggcggtagc
      781 ggcagcggct acggcaacgg caacggctac agcaacggca gcggcaacgg cgacggcgac
      841 ggcaacggca acggtagcgg caacggtagc ggctatggca acggctacgg caacggctac
      901 agcaacggca gcggcaacgg ctaaacctta aaaccgcccg aagctatatc tgccaagccg
      961 gggatagcac aaagcgatga agtatcgaac ttcaaagcgg ggcaacggca cggcgaaaca
     1021 gtgaatgctg cgggcggttt tctcaaacgg aaaggacgaa ggcggtgaaa tattacggca
     1081 cggcggctta cggcagcccc gattggggga tggaaagata ttacgcgcgg gaggatatgc
     1141 ggcaggcttt ggacggttgg gaggcggaaa
//
LOCUS       DAXFZM010000161         1146 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.163, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000161 DAXFZM010000000
VERSION     DAXFZM010000161.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1146)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1146)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1146
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.163"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..1130
                     /locus_tag="ACFJAG_002114"
     CDS             <1..1130
                     /locus_tag="ACFJAG_002114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HFC3981306.1"
                     /translation="SPKTFRQTYLYQKPKLFKGAVRNLEAASCKYINEIYQRADPTAP
                     LFHLRKKGAIVPKEEYVESFDDLGKTRYRFIKSVIYEHMKNGASLVYNHINNEPFSDH
                     IARQVARFAGAHTIVSGYLAFGSDESYKNHWDARDMYAVQLFGKKRWQLTAPDFPMPL
                     YMQQTKDTDISIPEHIDMDIILEAGDVLYIPRGWWHRPIPLGCETFHFAVGTFPPNGY
                     NYLEWLMKKFPTIESLRHSFSDWEQDRTRINDTAAQIAAMIADPVNYEAFSEDFLGKE
                     RTDTAFHLEQFANPNATPLSDDVRLRLNANNLDTLEKGYLIGNGMKISVDELGKKVLE
                     HIGKNEPLLLKNLLVNFNQAKHEEVRKLIYQLIELDFLEIL"
BASE COUNT          339 a          260 c          245 g          302 t
ORIGIN      
        1 ttagtcctaa aacgttccga cagacttatc tgtatcaaaa gcccaagctc tttaaaggag
       61 cggttcggaa tctcgaagcc gcatcttgta aatatatcaa cgagatatac caacgagcag
      121 acccaaccgc accgctgttt catctgcgta aaaaaggcgc aatcgttcct aaagaagaat
      181 acgtcgaaag tttcgacgat ttgggcaaaa ctcgctaccg ttttattaaa tccgttatct
      241 acgaacatat gaagaacggt gcgtcgttag tctataacca tattaacaac gagccgtttt
      301 cagaccatat cgcccgtcaa gtcgcccgct ttgccggcgc acatactatt gttagtggat
      361 atcttgcttt tggcagcgac gaatcttata aaaaccattg ggacgcccga gatatgtatg
      421 ccgtccagct tttcggcaag aaacgttggc aacttactgc ccctgatttc cctatgccat
      481 tgtatatgca acagactaaa gatactgata tttccattcc tgaacatatc gatatggata
      541 ttatccttga agcaggtgat gtcctctaca tcccacgcgg ttggtggcac agacctatcc
      601 cgctcggctg tgaaaccttc cacttcgctg tcggtacctt cccaccaaac ggctataatt
      661 acctcgagtg gctaatgaag aaatttccca ccatagaaag tctgcgccac agtttctcag
      721 actgggagca agataggacg cgtatcaacg atactgccgc acaaattgcc gccatgattg
      781 ccgaccccgt caattacgaa gccttcagtg aagactttct cggcaaagaa cgtaccgata
      841 ccgcttttca tctcgaacag ttcgcgaatc ccaacgctac tccgctttca gacgacgtca
      901 ggttgagatt aaatgccaat aatttggata cgttggaaaa gggatatttg attgggaatg
      961 ggatgaagat aagcgtagat gagttgggga aaaaagtgtt agaacacatc ggtaagaatg
     1021 aaccgttatt gttgaaaaat ctactggtta acttcaatca ggcaaaacat gaagaagtta
     1081 ggaagttgat ttatcagttg atagagttag attttctgga aattttgtga gggattctat
     1141 gaaaaa
//
LOCUS       DAXFZM010000162         1144 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.164, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000162 DAXFZM010000000
VERSION     DAXFZM010000162.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1144)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1144)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1144
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.164"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..>1144
                     /gene="tuf"
                     /locus_tag="ACFJAG_002115"
     CDS             <1..>1144
                     /gene="tuf"
                     /locus_tag="ACFJAG_002115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012081251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HFC3981307.1"
                     /translation="RSKPHVNVGTIGHVDHGKTTLTAALTTILAKKFGGAAKAYDQID
                     NAPEEKARGITINTSHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAA
                     DGPMPQTREHILLARQVGVPYIIVFMNKCDMVDDAELLELVEMEIRDLLSSYDFPGDD
                     CPIVQGSALKALEGDAAYEEKIFELATALDSYIPTPERAVDKPFLLPIEDVFSISGRG
                     TVVTGRVERGIIHVGDEIEIVGLKETQKTTCTGVEMFRKLLDEGQAGDNVGVLLRGTK
                     REDVERGQVLAKPGTITPHTKFKAEVYVLSKEEGGRHTPFFANYRPQFYFRTTDVTGA
                     VTLEKGVEMVMPGENVTITVELIAPIAMEEGLRFAIREGGRTVGAGV"
BASE COUNT          300 a          323 c          293 g          228 t
ORIGIN      
        1 acgtagcaaa ccgcacgtaa acgttggcac catcggtcac gttgaccatg gtaaaaccac
       61 cctgactgcc gctttgacta ctattttagc taaaaaattc ggcggcgctg caaaagctta
      121 cgaccaaatc gacaacgcac ccgaagaaaa agcacgcggt attaccatta acacctcgca
      181 cgtagaatac gaaaccgaaa cccgccacta cgcacacgta gactgtccgg gtcacgccga
      241 ctacgttaaa aacatgatta ccggcgccgc acaaatggac ggtgcaatcc tggtatgttc
      301 tgctgccgac ggccctatgc cgcaaacccg cgaacacatc ctgctggccc gtcaagtagg
      361 cgtaccttac atcatcgtgt tcatgaacaa atgcgacatg gtcgacgatg ccgagctgtt
      421 ggaactggtt gaaatggaaa tccgcgacct gctgtccagc tacgacttcc ccggcgacga
      481 ctgcccgatc gtacaaggtt ccgcactgaa agccttggaa ggcgatgccg cttacgaaga
      541 aaaaatcttc gaactggcta ccgcattgga cagctacatc ccgactcccg agcgtgccgt
      601 ggacaaacca ttcctgctgc ctatcgaaga cgtgttctcc atttccggcc gcggtaccgt
      661 agtcaccggc cgtgtagagc gaggtatcat ccacgttggt gacgagattg aaatcgtcgg
      721 tctgaaagaa acccaaaaaa ccacctgtac cggcgttgaa atgttccgca aactgctgga
      781 cgaaggtcag gcgggcgaca acgtaggcgt attgctgcgc ggtaccaaac gtgaagacgt
      841 agaacgcggt caggtattgg ccaaaccggg tactatcact cctcacacca agttcaaagc
      901 agaagtgtac gtattgagca aagaagaggg cggccgccat accccgtttt tcgccaacta
      961 ccgtccccaa ttctacttcc gtaccactga cgtaaccggc gcggttactt tggaaaaagg
     1021 tgtggaaatg gtaatgccgg gtgagaacgt aaccattact gtagaactga ttgcgcctat
     1081 cgctatggaa gaaggtctgc gctttgcgat tcgcgaaggc ggccgtaccg tgggtgccgg
     1141 cgtg
//
LOCUS       DAXFZM010000163         1118 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.165, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000163 DAXFZM010000000
VERSION     DAXFZM010000163.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1118)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1118)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1118
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.165"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..768)
                     /locus_tag="ACFJAG_002116"
     CDS             complement(<1..768)
                     /locus_tag="ACFJAG_002116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HFC3981308.1"
                     /translation="MALRNASDFLGAYGGGVRVERRQCAEHGGYAAKSVLRGVWTGCP
                     ACRKLEAADEMAAYAETLRRGAMRDALEKRIGRSGIAPRFRNCRIENYAVSDSIPGMA
                     RAKAAAAEYAANFADVLQTGRSMIFSGRRGTGKNHLACGIAREVIAAGKSALVITVGD
                     MLRTVKDSFGGGGGEAGAVGVFVKPDLLVLDEFGAGSLSETDGRILFSVVNARYERLM
                     PMLVLTNLTAEAFRENTDARIRDRLRDGGGKLIPFDWE"
     gene            complement(782..>1118)
                     /locus_tag="ACFJAG_002117"
     CDS             complement(782..>1118)
                     /locus_tag="ACFJAG_002117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HFC3981309.1"
                     /translation="KTGRHETELSLLADYGITGQIAEDFLTIRKAKRQPLTETAVRLI
                     AADAEKCGMTALQAAEYAIASGWGSFRAEWLQNKTFGRSGNRGGPTHNQTAAVPDAGS
                     YGDMPTTDF"
BASE COUNT          172 a          423 c          307 g          216 t
ORIGIN      
        1 ctcccagtcg aacggaatca gcttgccgcc gccgtcccgc agcctgtccc tgatccgcgc
       61 gtcggtgttt tcgcggaagg cttccgccgt caggttggtc agcaccagca tcggcatcag
      121 ccgctcgtac cgggcgttga cgacggaaaa caaaatccgc ccgtccgttt ccgacagact
      181 gcccgcgccg aactcgtcca gcaccagcaa atcgggcttc acgaaaaccc cgaccgcccc
      241 cgcctcgccg ccgccgccgc cgaaactgtc cttgaccgtc cgcagcatat cgcccaccgt
      301 gatgaccagc gcgcttttgc cggcggcgat gacttcgcgg gcgatgccgc aggcaaggtg
      361 gtttttgccc gtgcccctcc tgcccgaaaa aatcatgctc cgccccgtct gcaacacatc
      421 ggcgaagttt gccgcatact cggcggcggc cgccttcgcc ctcgccatcc ccgggatcga
      481 atcgctgacg gcgtagtttt caatccggca gtttctgaac cgcggggcga tgcccgaacg
      541 cccgatgcgt ttttccagcg cgtcgcgcat cgccccgcgg cgcagcgttt ccgcgtatgc
      601 cgccatttcg tccgccgcct ccagcttccg gcaggccggg cagcccgtcc acacgccgcg
      661 caaaacgctt ttcgccgcgt atccgccgtg ttccgcgcat tgcctccgct cgacccgcac
      721 gccgccgccg taagccccca agaaatcaga cgcgttcctc aaagccatat ccgaaccccc
      781 ctcaaaaatc cgtcgtcggc atatcgccgt agcttcccgc atccggcacg gcggcggttt
      841 ggttgtgcgt cgggccgccg cggtttccgg acctgccgaa agttttgttt tgcagccatt
      901 cggcgcggaa gctgccccag ccgctggcga tggcgtactc cgccgcctgc agcgccgtca
      961 tcccgcattt ctccgcatcg gcggcaatca gcctcaccgc cgtctccgtc agcggctgcc
     1021 gttttgcctt gcggattgtc aaaaagtctt cagcgatttg ccccgtgatg ccgtagtcgg
     1081 caagcagcga aagctcggtt tcgtgcctgc cggttttt
//
LOCUS       DAXFZM010000164         1068 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.166, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000164 DAXFZM010000000
VERSION     DAXFZM010000164.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1068)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1068)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1068
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.166"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..266)
                     /locus_tag="ACFJAG_002118"
     CDS             complement(<1..266)
                     /locus_tag="ACFJAG_002118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981310.1"
                     /translation="MNRAALFNRYPEWIIGQDGASRFITHCRYPRLIAKIHRQTDGEC
                     PGGHYRHSENGITLYDFIFFGGKPADEARFAAVLTETCRRAVKK"
     gene            complement(303..566)
                     /locus_tag="ACFJAG_002119"
     CDS             complement(303..566)
                     /locus_tag="ACFJAG_002119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981311.1"
                     /translation="MADILPSDKRRQPPKTKGNPINIIEQETKRTELRKIDAEIAKII
                     ADAHKINAESVKIAQESRWYPMMAATGLVTAIAAVLALIFKFA"
     gene            complement(586..834)
                     /locus_tag="ACFJAG_002120"
     CDS             complement(586..834)
                     /locus_tag="ACFJAG_002120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981312.1"
                     /translation="MHGFRDLFTNISLTAGKDTLTTDLALGHISRAALQRAGFSSLHH
                     YLTADSYRLQERRELAEWYGRRHRQAYEAAAQNTCNKT"
BASE COUNT          161 a          221 c          382 g          304 t
ORIGIN      
        1 atttttttga ctgcccggcg gcaggtttcg gtaaggacgg cggcaaatcg ggcttcgtct
       61 gccggtttgc cgccgaaaaa aataaaatcg taaagggtga tgccgttttc ggaatggcgg
      121 taatgcccgc ccgggcattc gccgtctgtc tgcctgtgga ttttggcaat caggcgggga
      181 tagcggcaat gggtaatgaa acggcttgcg ccgtcttgcc cgataatcca ttcggggtag
      241 cggttgaata gtgcggctct gttcattttg ttgagggata aagcccctcg cggggcttgt
      301 ggtcaggcaa atttgaatat cagtgccaac acggcggcga tggcggtaac cagaccggtg
      361 gccgccatca tgggatacca gcgggactct tgggctattt ttacggattc ggcgttgatt
      421 ttgtgcgcgt cggcaatgat tttggcgatt tcggcatcta tttttcttaa ctcggtgcgt
      481 tttgtttctt gttcgattat gtttattgga tttcctttcg tttttggcgg ttgccgccgc
      541 ttgtcggatg gcaggatgtc tgccatgtat gtatgttaat accttttagg ttttattgca
      601 agtgttttgg gcggcggctt cgtatgcttg gcggtggcgg cggccgtacc attcggcgag
      661 ttcgcgccgc tcttggaggc ggtagctgtc ggcggtcagg tagtggtgca ggcttgagaa
      721 gccggcgcgt tggagggcgg cgcggctgat gtggccaagg gcgaggtctg ttgtgagggt
      781 gtcttttccg gcggtcaggc tgatgttggt gaagaggtcg cggaatccgt gcatggtgtg
      841 tttggatttg ccggggtgct gccgtcatag cccagtcgtc ggatggcgtt gtgggcgaat
      901 ttgatgctga tgtggtcggg atggggggcg ggtttgcgcc gtgggcggat gcctgggaaa
      961 aggtggatgt tgtcgccggt ctgtgtgtgc agctctcgga gtatttctac tgcccagtcc
     1021 gacagtggga cggtaaaggg gtgtttggtc ttcatgtcgg cggcgggg
//
LOCUS       DAXFZM010000165         1013 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.167, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000165 DAXFZM010000000
VERSION     DAXFZM010000165.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1013)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1013)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1013
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.167"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            200..553
                     /locus_tag="ACFJAG_002121"
                     /pseudo
     CDS             200..553
                     /locus_tag="ACFJAG_002121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225727.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
     gene            551..811
                     /locus_tag="ACFJAG_002122"
     CDS             551..811
                     /locus_tag="ACFJAG_002122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HFC3981313.1"
                     /translation="MRPTTRDELRQALQEQGFRRTGSDAAQYETWKGPDGVKIDIRPN
                     GEVIRTQRVPRTDGVQGKYPQRQDYEGNPLPNNHHHSGYFVK"
     gene            808..>1013
                     /locus_tag="ACFJAG_002123"
     CDS             808..>1013
                     /locus_tag="ACFJAG_002123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981314.1"
                     /translation="MKKNIFHNVSLYEIIFSDNGNTLTLSFTDTIEGNYFGYIKCSNI
                     LNFKLDTNNFVDYEDKEDSLFPLF"
BASE COUNT          356 a          177 c          208 g          272 t
ORIGIN      
        1 ataattggta ttacgaggga agtaatttat ttaacagtat caacaaagca atgcattatt
       61 tatctcaaat aaaattagag aatgcatacg tgtcttttgt tttgaaattt atctaacaaa
      121 ggaagcacaa gaataggttt atagtaaaac atcaagatgt tgaaaatgct aggttttaac
      181 ctaacctacg ctgaccggat cagatacagc cgctcagcag actctacaag gtattaatga
      241 tttaggaaat ttaagtccgg aagcacaact tgccgccgcg agcctattac aggacagtgc
      301 ctttgcggta aaagacggca tcaattccgc cagacaatgg gctgatgccc atccgaatat
      361 aactgcaaca gcccaaactg cccttgccgt agcagaggcc gcaggtacgg tttggagagg
      421 taaaaaagta gaacttaacc cgactaaatg ggattgggtt aaaaataccg gctataaaaa
      481 acctgctgcc cgccatatgc agactttaga tggggagatg gcaggaggaa acaagccagt
      541 tgttaaatct attagaccaa ctacgcgaga tgaattacgt caagcattgc aagaacaagg
      601 ttttagacgt actggttcag atgcggctca atatgaaaca tggaaaggtc ctgatggcgt
      661 gaaaatagat attcgtccaa atggagaggt tataagaacc caaagagtgc cgcgaaccga
      721 tggtgtacag ggaaaatatc cgcaacgaca agattatgaa ggcaatccat tgccaaataa
      781 tcatcatcat tctggatatt ttgtcaaatg aaaaaaaata tttttcacaa tgtaagcctt
      841 tatgaaataa tcttttccga taatggaaat acccttacat tatcttttac agatacaatt
      901 gaaggtaatt atttcggata tatcaaatgc agtaatattt tgaattttaa attagataca
      961 aataatttcg tagattatga ggataaggaa gatagcttgt ttcccttgtt tat
//
LOCUS       DAXFZM010000166         1007 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.168, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000166 DAXFZM010000000
VERSION     DAXFZM010000166.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1007)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1007)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1007
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.168"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..525
                     /locus_tag="ACFJAG_002124"
     CDS             <1..525
                     /locus_tag="ACFJAG_002124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage replication initiation protein, NGO0469
                     family"
                     /protein_id="HFC3981315.1"
                     /translation="DPEGDPEMLMPDGRPYLISRRYTASLHSKSQLATDLKSWRGRDF
                     TPEERDNFDLRNILGKPCLLSIAHQESSDGKTTYANISAISNKMKSYTPKHPDNAVFA
                     FDLSDPDWANYGLLNEKLREQIAKSPEYAEAVNGRQPPAPPQKQAQAAEGRTEHPQGN
                     AAPAEDIEDDIPFN"
     gene            665..847
                     /locus_tag="ACFJAG_002125"
     CDS             665..847
                     /locus_tag="ACFJAG_002125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981316.1"
                     /translation="MANIDLTQWDGKTIGAAANPEQGYINITIGSDDLFINIEQAYAI
                     HAALGEAVAEYEGGAQ"
     gene            844..>1007
                     /locus_tag="ACFJAG_002126"
     CDS             844..>1007
                     /locus_tag="ACFJAG_002126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017147284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siphovirus Gp157 family protein"
                     /protein_id="HFC3981317.1"
                     /translation="MTALALYRCAADVQAALDYYFDSETEREDTLEAVIGQFEVKAQS
                     VIAYIKNQEIT"
BASE COUNT          290 a          310 c          263 g          144 t
ORIGIN      
        1 gaccctgaag gcgatccgga aatgctgatg ccggacggca ggccctacct catcagccgc
       61 cggtacaccg ccagcctgca cagcaaaagc caactggcaa cagacctcaa aagctggcgc
      121 ggaagggact ttacaccgga agaacgcgac aacttcgatt tgcgcaatat tttgggcaag
      181 ccctgcctgt tgagtatcgc ccaccaagaa agcagcgacg gcaaaaccac ctatgccaac
      241 atttccgcca tcagcaacaa gatgaagagc tacaccccga aacatccgga caacgccgtt
      301 tttgccttcg acctgtcaga ccccgattgg gcgaattacg gcctcctgaa cgagaaactg
      361 agggagcaga ttgccaaaag cccggaatat gccgaagccg taaacggccg ccaaccgccg
      421 gcgccgccgc agaaacaggc ccaagcggcg gaagggcgga cggaacaccc ccaaggcaat
      481 gccgcgcctg ccgaagacat cgaggacgac atccctttta attaagcccg ccgtcagggc
      541 gtaaaaccgg acggaaaacc gcaaacaaac gccgcgccct gcgggcaggc cccgcactct
      601 gaagcagtag tcgattttta gtttgcaact gcttcggacg gcaacagaga aaggaaacaa
      661 aaaaatggca aacatcgacc tgacccaatg ggacgggaaa accattggcg ccgccgccaa
      721 tccagaacag ggatacatca acatcaccat cggcagcgac gacctattca tcaacatcga
      781 acaggcatac gccatacacg ccgcgcttgg cgaagcggtt gccgaatatg agggaggggc
      841 acaatgaccg ccctcgcact ctaccggtgc gcggcagacg tacaggcggc gcttgattac
      901 tacttcgaca gcgaaaccga gcgcgaagac acgctggaag ccgttatcgg gcagttcgag
      961 gtcaaagcgc aatccgttat cgcttatatt aaaaaccaag aaatcac
//
LOCUS       DAXFZM010000167          982 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.169, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000167 DAXFZM010000000
VERSION     DAXFZM010000167.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 982)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 982)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..982
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.169"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            135..>982
                     /gene="mafA"
                     /locus_tag="ACFJAG_002127"
     CDS             135..>982
                     /gene="mafA"
                     /locus_tag="ACFJAG_002127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin MafA"
                     /protein_id="HFC3981318.1"
                     /translation="MRARLLIPILFSVFILSACGTLTGIPSHGGGKRFAVEQELVAAS
                     ARAAVKDMDLQALHGRKVALYIATMGDQGSGSLTGGRYSIDALIRGEYINSPAVRTDY
                     TYPRYETTAETTSGGLTGLTTSLSTLNAPALSRTQSDGSGSRSSLGLNIGGMGDYRNE
                     TLTTNPRDTAFLSHLVQTVFFLRGIDVVSPANADTDMFINIDVFGTIRNRTEMHLYNA
                     ETLKAQTKLEYFAVDRNNKKLLIKPKTNAFEAAYKENYALWMGPYKVSKGIKPTEGLM
                     VDFSDIR"
BASE COUNT          290 a          233 c          211 g          248 t
ORIGIN      
        1 aacaacagtg agataaaagt tcttgttcca ttttaaaaca attagtaaaa tcgagtttat
       61 cctagttgtc caggacggcc cctaatttat ttacaatttt gatacaattt gtttttcatc
      121 aaaggagaaa atctatgcgg gcacggctgc tgatacctat tcttttttca gtttttattt
      181 tatccgcctg cgggacactg acaggtattc catcgcatgg cggaggcaaa cgcttcgcgg
      241 tcgaacaaga acttgtggcc gcttctgcca gagctgccgt taaagacatg gatttacagg
      301 cattacacgg acgaaaagtt gcattgtaca ttgcaactat gggcgaccaa ggttcaggca
      361 gtttgacagg gggtcgctac tccattgatg cactgattcg cggcgaatac ataaacagcc
      421 ctgccgtccg caccgattac acctatccgc gttacgaaac caccgctgaa acaacatcag
      481 gcggtttgac aggtttaacc acttctttat ctacacttaa tgcccctgca ctctcgcgca
      541 cccaatcaga cggtagcgga agtaggagca gtctgggctt aaatattggc gggatggggg
      601 attatcgaaa tgaaaccttg acgaccaacc cgcgcgacac tgcctttctt tcccacttgg
      661 tacagaccgt atttttcctg cgcggcatag acgttgtttc tcctgccaat gccgatacag
      721 atatgtttat taacatcgac gtattcggaa cgatacgcaa cagaaccgaa atgcacctat
      781 acaatgccga aacactgaaa gcccaaacaa aactggaata tttcgcagta gacagaaata
      841 acaaaaaatt gctcatcaaa cccaaaacca atgcgtttga agctgcctat aaagaaaatt
      901 acgcattgtg gatggggccg tataaagtaa gcaaaggaat caaaccgacg gaaggattaa
      961 tggtcgattt ctccgatatc cg
//
LOCUS       DAXFZM010000168          963 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.170, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000168 DAXFZM010000000
VERSION     DAXFZM010000168.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 963)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 963)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..963
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.170"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..247
                     /locus_tag="ACFJAG_002128"
     CDS             <1..247
                     /locus_tag="ACFJAG_002128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981319.1"
                     /translation="YTIRKNETESCLTERGGEWLKHIYEFNRESFIFSDVLLQKGESE
                     ENFSEIVLKSIKNNKILTVEVRSGLHFDLRNIYRIEM"
     gene            292..630
                     /locus_tag="ACFJAG_002129"
     CDS             292..630
                     /locus_tag="ACFJAG_002129"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981320.1"
                     /translation="MKTFEKTWSAQYRDMEISVRNFWNLKRTGAEVYINGRRVYHNEA
                     GMASASLRSLMGEYLEFEESGTKITVEIGSAWHFNETIRNINTHLRGTKLPGSNWRVQ
                     DKGHFHLWKR"
     gene            618..>963
                     /locus_tag="ACFJAG_002130"
     CDS             618..>963
                     /locus_tag="ACFJAG_002130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981321.1"
                     /translation="MEKIINSKVRETNFNQAWRVIRAMQINNISDEQVMIVRMSCYLK
                     KDEIFKNIERYGYQSSDIKKINPPFPLNILPVPKPYYFYLYDTHLNQIYDLAWSCNDF
                     LIFEIFILDRESI"
BASE COUNT          335 a          120 c          199 g          309 t
ORIGIN      
        1 ttatacaata aggaagaatg aaactgaatc ttgccttaca gaaagaggag gtgaatggtt
       61 gaaacatatt tatgaattta atcgggaaag ttttattttt tctgatgtgc ttctacaaaa
      121 gggagaaagc gaagagaatt tttcagaaat tgtcttaaaa tcaataaaaa ataataaaat
      181 tttgacagtt gaggtacggt caggcttgca ttttgactta agaaatattt atcgtattga
      241 gatgtaataa tgcaattgat atgtgccgat tggacaggta taggaaattt tatgaaaacc
      301 ttcgaaaaaa catggtctgc acaatatcgg gatatggaaa tttcagtacg gaatttttgg
      361 aatttgaaac ggacaggggc ggaagtctat atcaacggca ggcgggttta tcataacgaa
      421 gccgggatgg cgtctgcttc tttgcgttcg ctaatggggg aatacctgga atttgaagaa
      481 agcggtacga aaattaccgt tgaaatcggc agcgcgtggc attttaatga aactataaga
      541 aatattaata cacatttaag aggtacgaaa cttccaggtt ctaactggag agttcaagat
      601 aaggggcatt ttcatctttg gaaaagataa taaattctaa ggtaagggag actaatttta
      661 atcaggcatg gcgtgttata cgcgccatgc aaataaataa tatatctgat gaacaggtta
      721 tgattgtcag aatgtcttgt tatcttaaga aagatgaaat ttttaagaat atagaaagat
      781 atggatatca gtcatcagat attaagaaaa ttaatcctcc ttttccatta aatattttac
      841 ctgttcccaa accttattat ttttatcttt atgataccca tttgaatcaa atttatgatt
      901 tggcttggtc atgtaatgat tttttaatat ttgaaatatt tattttggat agggaaagca
      961 tca
//
LOCUS       DAXFZM010000169          956 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.171, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000169 DAXFZM010000000
VERSION     DAXFZM010000169.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 956)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 956)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..956
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.171"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..173)
                     /locus_tag="ACFJAG_002131"
     CDS             complement(<1..173)
                     /locus_tag="ACFJAG_002131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HFC3981322.1"
                     /translation="MGLTQEVLKELLRYDDNTGKLYWAERPRKYFNSGLHYKSWNTGF
                     SGKEVFLYKGRLG"
     gene            complement(164..547)
                     /locus_tag="ACFJAG_002132"
     CDS             complement(164..547)
                     /locus_tag="ACFJAG_002132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein NinB"
                     /protein_id="HFC3981323.1"
                     /translation="MNGAEFTLTPQNKKQVMRSIWDSPDGWFENGNLEITIRPRKSKR
                     SIEQNRRLWFLYREISEKVFIDGRRFSQDVWHEFLKRKFIGCIEMPNGQLMGISTTKL
                     SVREMSEYQEKIISWASMEHGVLWD"
     gene            complement(544..849)
                     /locus_tag="ACFJAG_002133"
     CDS             complement(544..849)
                     /locus_tag="ACFJAG_002133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclease domain-containing protein"
                     /protein_id="HFC3981324.1"
                     /translation="MSSAIRKAAKGGQCTPNIAGVCNDNPETVVLCRFPGETHGAGLK
                     SGGLGAGFGCGCRRGAIDGRGAGLSREDKEFYMRRSQLRTIRRLEALGVVGVKGRLK"
BASE COUNT          215 a          304 c          176 g          261 t
ORIGIN      
        1 taccccaacc tgcctttgta taagaaaacc tccttgccgg aaaatccggt attccaagat
       61 ttgtaatgca aaccgctatt gaaatacttt cttggacgct ccgcccaata taactttccc
      121 gtattgtcat catatcttaa taattctttt aaaacctctt gtgttaatcc cataaaacac
      181 catgctccat agatgcccaa gatataatct tttcttgata ttcagacatt tcccgaactg
      241 ataattttgt cgttgatata cccattaatt gcccgttagg catttcaata catccaataa
      301 attttctttt taaaaattca tgccatacat cttgactaaa ccttctccca tcgataaaaa
      361 ctttttctga aatttcacga tacaaaaacc atagccgcct gttctgctcg atgctccgtt
      421 ttgacttgcg cgggcggatt gtgatttcaa ggttgccgtt ttcaaaccac ccgtccgggc
      481 tgtcccaaat cgaccgcata acctgctttt tgttttgggg cgtcagtgta aattccgccc
      541 cgttcatttc agacggcctt tcacgccgac aacccccagt gcttcaaggc ggcgtatcgt
      601 gcgcaattgc gaacggcgca tataaaattc cttgtcttcg cggcttaggc ctgcgcccct
      661 gccgtcgatc gcgccgcggc ggcaaccgca cccgaaaccc gcgcccaaac cgccgctttt
      721 caatcccgcc ccgtgcgtct cgcccgggaa acggcacaac acgaccgttt cagggttgtc
      781 attgcacacg cccgcgatgt tcggcgtgca ttgcccgcct ttggcggctt tgcgtatcgc
      841 gctagacatc ccaaccctcc tgtccgatga aatcccaacc ctcgtctgcc gcatccgtct
      901 gttccatctc caactccccc acttccaccg ccaaaccgcc gcctgcgacc ggctcg
//
LOCUS       DAXFZM010000170          916 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.172, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000170 DAXFZM010000000
VERSION     DAXFZM010000170.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 916)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 916)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..916
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.172"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..514
                     /gene="mafB"
                     /locus_tag="ACFJAG_002134"
     CDS             <1..514
                     /gene="mafB"
                     /locus_tag="ACFJAG_002134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012504007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="polymorphic toxin MafB class 3"
                     /protein_id="HFC3981325.1"
                     /translation="TVTRKTLDGQIAGKNKPIKPSSGDYVLPVGRQIIDPTRTSFSQA
                     TVSYQKRGANYNYDSLVAAMNEKKSWVGDRVDVVNMPDGAPTSMDNTRIMAAREAGVK
                     VEANVHNFNDRLSSKERIRFKHDGIEPQTWGEAIQLRIRKQETQKGVPEGWSKRFPNG
                     SIYDVKVLRK"
     gene            511..882
                     /locus_tag="ACFJAG_002135"
     CDS             511..882
                     /locus_tag="ACFJAG_002135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0042546 - cell wall biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HFC3981326.1"
                     /translation="MIKQNSFVPYPEAMLPKGFKYPQSYLKLAQSTHAINYDEQYSFP
                     WWFENAESNISEVIDIYFEITGIPNLLPFARNQEWAACFDISDKSGNPKIIVVNLDNT
                     KYYETFENFDTWLKEAENDGW"
BASE COUNT          318 a          148 c          189 g          261 t
ORIGIN      
        1 aactgttacc cgaaagactt tagatgggca aatagctggc aagaacaagc ctattaaacc
       61 ttcttcagga gattatgtct tgccggtagg cagacaaatc atagatccta ctcgtacatc
      121 tttttcacaa gctacagtta gctatcagaa gcgtggtgca aattacaact atgattctct
      181 tgtagctgca atgaacgaaa aaaaatcatg ggttggcgac agggttgatg ttgttaatat
      241 gcctgatgga gcacctacta gtatggataa cacgcgtatt atggcagcac gtgaagcagg
      301 ggtaaaagtg gaagcgaatg ttcataattt taatgaccga ttatcatcaa aagagagaat
      361 caggtttaag catgatggta ttgagcctca aacttgggga gaagctatcc agctacgaat
      421 tagaaagcaa gaaacacaaa aaggagttcc agaagggtgg agcaaaagat ttcctaacgg
      481 aagtatttat gatgtaaagg tacttaggaa atgataaaac aaaatagttt tgttccgtat
      541 cctgaagcaa tgcttcctaa aggatttaaa tatccgcaaa gttatttaaa attagctcaa
      601 tccactcatg ccattaacta cgatgaacaa tattcttttc cttggtggtt tgaaaatgca
      661 gaaagcaata tatcagaagt aattgacatt tattttgaaa taactggcat tccaaaccta
      721 ttaccttttg ctagaaacca agagtgggct gcctgttttg atatttcaga taaatcaggt
      781 aatcctaaaa ttatagtagt taatttagat aatacaaaat attacgagac ttttgaaaat
      841 tttgatactt ggctaaaaga agctgaaaat gatggttggt agcagccgta ggtcggattc
      901 tcgaatccga catttt
//
LOCUS       DAXFZM010000171          886 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.173, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000171 DAXFZM010000000
VERSION     DAXFZM010000171.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 886)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 886)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..886
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.173"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            178..738
                     /locus_tag="ACFJAG_002136"
     CDS             178..738
                     /locus_tag="ACFJAG_002136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HFC3981327.1"
                     /translation="MKKIIFAALAAAAVGTASATYKVDEYHANVRFAIDHFNTSTNVG
                     GFYGLTGSVEFDQAKRDGKIDITIPVANLQSGSQHFTGHLKSADIFDAAQYPDIRFVS
                     TKFNFNGKKLVSVDGNLTMRGKTAPVKLKAEKFNCYQSPMAETEVCGGDFSTTIDRTK
                     WGVDYLVNAGMTKNVRIDIQIEAAKQ"
BASE COUNT          249 a          295 c          186 g          156 t
ORIGIN      
        1 aatctggtac agacccaaaa acaaagcacg gataacaccg cgctttttca tccgccctgt
       61 tccgcccgcc cgttcgtcaa ccgcctgcaa acccaccgtt taccggcagg aaatgccata
      121 aatccccgcc tatgttagga taaacgcctt taccggccca cacaaaggat tatcatcatg
      181 aaaaaaatca tcttcgccgc gctcgcagcg gcagccgtcg gcactgcctc cgccacctac
      241 aaagtggacg aatatcacgc caacgtccgt ttcgccatcg accacttcaa caccagcacc
      301 aacgtcggcg gtttttacgg tctgaccggt tccgtcgagt tcgatcaagc aaaacgcgac
      361 ggcaaaatcg acatcaccat tcccgtcgcc aacctgcaaa gcggttcgca acacttcacc
      421 ggccacctga aatccgccga catcttcgat gccgctcaat atccggacat ccgcttcgtt
      481 tccaccaaat tcaacttcaa cggcaaaaaa cttgtttccg ttgacggcaa cctgaccatg
      541 cgcggcaaaa ccgcccccgt caaactcaaa gccgaaaaat tcaactgcta ccaaagcccg
      601 atggcggaaa ccgaagtttg cggcggcgac ttcagcacca ccatcgaccg caccaaatgg
      661 ggcgtggact acctcgttaa cgccggtatg accaaaaacg tccgcatcga catccaaatc
      721 gaagctgcaa aacaataagc cttgatgcga atcagcacaa atgccgtctt catcaaaccg
      781 ccctgccaac cgtaagccga tatggcggag cacaacccgc cgaaagatat tttggcggca
      841 ggcggggctt gccggaaagt ccggaaagta acgaccgaaa acaacg
//
LOCUS       DAXFZM010000172          885 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.174, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000172 DAXFZM010000000
VERSION     DAXFZM010000172.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 885)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 885)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..885
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.174"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            308..754
                     /locus_tag="ACFJAG_002137"
                     /pseudo
     CDS             308..754
                     /locus_tag="ACFJAG_002137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981065.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
BASE COUNT          247 a          255 c          214 g          169 t
ORIGIN      
        1 cgaacaagcg gtccggattc ccgcccgcgc gggaatgacg gcggaaagat gcccgacggt
       61 ctttatagcg gattaacaaa aatcaggaca aggcggcgaa gtcattgcgg tattcgcatc
      121 ataggccgga aaaatccggc ctccgtcatt cccgcgaaag cgggaatcca gttcgttgag
      181 tttcagttat ttagaataaa ttttgaaact ttaatcccgt cattcccacg aaagtgggaa
      241 tctaggacgt aaaatctaaa gaaaccgttt tcccgataag tttccgtgcc gacgaggctg
      301 gattcccgcc cgcgcgcaag tttccgaagc catccttttg gccgaaggtc aaaaatcagc
      361 cgttaccgag tattacctga ataacggcga atggccgaaa gacaacactt ctgccggcgt
      421 ggcatcctcc ggcgaaatca aaggcaaata tgttcaaagc gttacggtcg caaacggcgt
      481 cgtcaccgcc gaaatgaatc caagcggcgt aaacaatgaa atcaaaggca aaaaactctc
      541 cctgtgggcc aggcgtcaaa acggttcggt aaaatggttc tgcggacagc cggttacgcg
      601 cgacgccgcc gacaaagccg acgacaccgt tgccgacgcc gccgacgcca ccgccaacgg
      661 catcgacacc aagcacctgc cgtcaacctg ccgcgatgaa tcaactgccg tttgcataga
      721 aacaccacct acggctttct ataaaaatac ctaagccgtc attcccacga acctacatcc
      781 cgtcattccc gcgaaagtgg gaatccagga cgtaaaatct aaagaaaccg ttttcccgat
      841 aagtttccgt accgacagac ccggattccc gcctgcgcgg gaatg
//
LOCUS       DAXFZM010000173          876 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.175, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000173 DAXFZM010000000
VERSION     DAXFZM010000173.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 876)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 876)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..876
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.175"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            152..381
                     /locus_tag="ACFJAG_002138"
                     /pseudo
     CDS             152..381
                     /locus_tag="ACFJAG_002138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017805306.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            739..>876
                     /locus_tag="ACFJAG_002139"
     CDS             739..>876
                     /locus_tag="ACFJAG_002139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HFC3981328.1"
                     /translation="MNTFFRQTAQAMTAKHIGRFPLSELDQVIDWQPIEQYLNRQKTR
                     YL"
BASE COUNT          259 a          201 c          171 g          245 t
ORIGIN      
        1 ctccgttttg ccgaccatgg cggatgcgtc aaatgtcagc ttggatatat ccaatcctac
       61 ggcgttacgc atgggattac ccttatatat tgcgtcccta agaaggggcg attaacaaaa
      121 attaatgccc tttcttaggg acgcaatata taaggtttat accgtcgttg tccctaatgc
      181 gcaatcagcg acattgttgc caattatccg aaagaaagtt aagcctgatg gcattgtata
      241 cacggatacc tttcgtagtt atgatgtgct tgatgttagt gaatttagcc atttacgtaa
      301 gtttaacggc attcccaaag agcatttggg gctatattta aagaaatgcc aatggcattt
      361 gaaatagaat ctcaaattta gattttaaga caattagtta atgggaattt ggtctggtta
      421 tctagtacaa ccccaaaagt ttttatataa aaacagtttg gtaagttctc ttcgtgaagt
      481 gcttatgttt tgccacaaaa gttccataat catggcggca tcacccaagc tccatccttc
      541 caagaaaatg gcatctttgt tgtggttgaa aatcgactcc atacgatttt ggacaagcat
      601 agggatagat gttctgaaaa acggcagcgc gggcattctc caaccacctt cccaaatctt
      661 ataatacaaa cccgaagacc tttgcaaaat tcccctaaaa tcccctaaat tcccaccaag
      721 gcatttaggg gatttcccat gaacaccttc ttccggcaaa ccgcacaagc catgactgcc
      781 aaacacatcg gccgcttccc gctatcggag ttggaccagg tgattgattg gcagccgatc
      841 gaacaatacc tgaaccgtca aaaaacccgt tacctc
//
LOCUS       DAXFZM010000174          861 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.176, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000174 DAXFZM010000000
VERSION     DAXFZM010000174.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 861)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 861)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..861
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.176"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
BASE COUNT          249 a          137 c          214 g          261 t
ORIGIN      
        1 gttgtttaaa ctctagtaga ttaacaaaaa tcaggacaag gcgacgaagc cgcagacagt
       61 acagatagta cggaaccgat tcactcggtg cttcagcacc ttagggaatc gttccctttg
      121 agccggggcg gggcaacgcc gtaccggttt ttgttaattc actatattgc atggtgcatg
      181 cattaaatca gtcttctagc gccgcaatgg gaaaacatag aagataaacg aaatggatga
      241 tctaatacta tattttttat caggtatatt cggaaatcaa gttgctgaat atattataaa
      301 aaacaaccgc gagataaaag ttccctttat tgcgctttac gctatatttt ttacgttgat
      361 ttatactgtg gctttgttgt ttctcagtct gatctattgg gtcaatggtg cggagattgc
      421 atggaagggg ataggtattt tcagtatgtc ggtcagtttt tgtatagtct tctgtcttta
      481 tttggttgac aaggcaggaa gatgtaagga taagaaacaa tagggatcag atgcggcagc
      541 aaacgtagat tgggtctagg ctcaacctgc gtttgctgca tctttggaag aaatagtgga
      601 ttcgaaaaaa taggaagagc actgattaat ggtatgcgag gtgtagcagt gggggctgtt
      661 gctggtggca taactggtta tgcaggttct acgggtaaga acactgacat tcgccgttaa
      721 ataataaata aaccaacttc caaccaaacc tgctatcggt ttggttggaa gtgagaggag
      781 gtaaggtagt gtttgctgtt attttctttt cgacattggg ctgtatttta gcatggataa
      841 gagatattcc taaaataaaa t
//
LOCUS       DAXFZM010000175          855 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.177, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000175 DAXFZM010000000
VERSION     DAXFZM010000175.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 855)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 855)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..855
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.177"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..246)
                     /locus_tag="ACFJAG_002140"
     CDS             complement(<1..246)
                     /locus_tag="ACFJAG_002140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HFC3981329.1"
                     /translation="MRTHIRTCVYHDSGTKGSNTASGISGTAAGAAEQAFFSAAKTAN
                     RSASAASANAPPHPDKPENGRKPMTFQGHNNRKKAGGY"
     gene            complement(243..>855)
                     /locus_tag="ACFJAG_002141"
     CDS             complement(243..>855)
                     /locus_tag="ACFJAG_002141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981330.1"
                     /translation="REASQAVAQWTKDFDDLSPNQRQLVLRPLSNLFAAYEEFLKDAP
                     ARLIAEVSAYSLAVRVAKKAMAFLELDGGLISAVGKVVNGADSRAEARRLKMPYAEFT
                     GRILHAANLLYDVGIQADKELSAMYGRPLNPVRPRRISDVRRPMMKMLVADKGGALVR
                     AVKDSEDVIRHCDNGAGFSCFNWTEHFKRTANLISLMHREAAA"
BASE COUNT          138 a          256 c          256 g          205 t
ORIGIN      
        1 gtagccgccg gcttttttac ggttgttgtg tccttgaaac gtcatgggtt ttcgtccgtt
       61 ctctggcttg tccgggtgtg gcggagcgtt tgcggatgcg gctgacgcgc tgcggtttgc
      121 cgtcttcgcc gcgctgaaaa acgcttgttc cgccgcgccg gcagccgtgc cgcttatgcc
      181 tgatgccgtg tttgagcctt ttgtgccgga atcgtgatac acgcaggtcc ggatgtgcgt
      241 cctcatgccg ccgcttccct gtgcatgagg ctgatcaggt ttgccgtccg tttgaaatgt
      301 tcggtccagt tgaagcagct gaagccggcg ccgttgtcgc aatgccggat gacgtcttcc
      361 gagtctttta cggcccggac caacgcgccg cctttgtccg caacaagcat tttcatcatc
      421 ggccggcgca cgtcgcttat ccgtcggggg cgcacgggat tcagcggcct gccgtacatc
      481 gccgaaagct ccttgtccgc ctgaatgccc acatcgtaaa gcaggttcgc ggcgtgtagg
      541 atccggcctg taaattccgc gtacggcatt ttaaggcggc gggcttccgc gcgcgaatcc
      601 gcgccgttga cgactttgcc gaccgccgaa atcaaaccgc cgtcaagctc taaaaacgcc
      661 atggctttct tggcaacccg cacggccaat gagtatgccg atacttcggc tatcagccgt
      721 gcaggcgcgt ctttcagaaa ttcttcgtac gcggcgaaga gatttgacag cggacgcagc
      781 acgagttggc gctgattcgg gctaaggtcg tcgaaatcct tagtccattg cgcgaccgcc
      841 tgcgatgctt cgcgg
//
LOCUS       DAXFZM010000176          776 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.178, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000176 DAXFZM010000000
VERSION     DAXFZM010000176.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 776)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 776)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..776
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.178"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..>776)
                     /locus_tag="ACFJAG_002142"
     CDS             complement(<1..>776)
                     /locus_tag="ACFJAG_002142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IgG-binding virulence factor TspB family
                     protein"
                     /protein_id="HFC3981331.1"
                     /translation="ALLAHDVYETFKEDIQARGCRYDPETDKFVKGYEYANCLWYEDE
                     RRINKTYGCYGVDSSIMRLMPDRSRFPEVKQLMESQMYRLARPFWNWRKEELNKLSSL
                     DWNNFVLNRCTFDWNGGGCPVNKGDDFRAGASFSLGRNPKYKEEMDAKKPEEILSLKV
                     DADPDKYIKATGYPGYSEKVEVAPGTKVNMGPVTDRNGNPVQVAATFGRDAQGNTTAD
                     VQVIPRPDLTPGSAEAPHAQPPPEVSPAENPANNPDPDEN"
BASE COUNT          160 a          190 c          189 g          237 t
ORIGIN      
        1 ggttctcatc ggggtccggg ttgtttgcgg ggttttcggc gggcgatact tcgggcggcg
       61 gctgtgcgtg aggtgcttcc gcgcttccag gggttaaatc gggacgcggg attacttgta
      121 catccgccgt ggtgttgcct tgcgcgtccc tgccgaatgt tgcggcaacc tgaacgggat
      181 tcccgttcct gtccgtgacg ggccccatat tcacttttgt tccgggtgcg acttctactt
      241 tttcggaata accgggatat ccggttgcct ttatgtattt gtcgggatcg gcatcgactt
      301 tcaacgataa aatctcttcc ggctttttgg catccatttc ttctttgtat ttcggattgc
      361 ggccaaggga aaaagaagcc ccagctctga aatcatcacc tttattgacc ggacaacctc
      421 cgccgttcca atcaaatgtg caacgattta aaacaaaatt attccaatcc aaagaactta
      481 atttattcag ttcttcttta cgccaattcc aaaacggacg tgccagccta tacatttgac
      541 tttccatcag ttgtttgact tcggggaatc tgctgcgatc gggcataagg cgcataatcg
      601 aactgtcaac gccgtagcag ccataggttt tattaatacg tctttcgtct tcgtaccaaa
      661 ggcaattagc atattcgtag ccttttacaa atttgtcggt ttcgggatcg tatcggcagc
      721 ctcgtgcctg tatgtcttct ttgaaagttt cgtatacgtc gtgggctaaa agggct
//
LOCUS       DAXFZM010000177          765 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.179, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000177 DAXFZM010000000
VERSION     DAXFZM010000177.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 765)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 765)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..765
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.179"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..342
                     /locus_tag="ACFJAG_002143"
     CDS             <1..342
                     /locus_tag="ACFJAG_002143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981332.1"
                     /translation="MAGGNRPPKSITSEGKANAATYPKLVNQLNEQNLNNIAAQDPRL
                     SLAIHEGKKNFPIGTATYEEADRLGKIWVGEGARQTSGGGWLSRDGTRQYRPPTEKKI
                     TICNYRYSSKF"
     gene            414..>765
                     /locus_tag="ACFJAG_002144"
     CDS             414..>765
                     /locus_tag="ACFJAG_002144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 8 family protein"
                     /protein_id="HFC3981333.1"
                     /translation="MRLKLKNYDCSDFDLEDFPQDKLENFCILLTLSIGFDESNGADY
                     FYVYIYSTEWLLSNIHRPMSLKNSIVTNRFNIEHILKLINDILEICNSTSEDKSISNL
                     AKYFDWEFDDYNLNI"
BASE COUNT          298 a           98 c          139 g          230 t
ORIGIN      
        1 atggcagggg ggaatagacc gcctaaatct ataacgtcgg aaggaaaagc taatgctgca
       61 acctatccta agttggttaa tcagctaaat gagcaaaact taaataacat tgcggctcaa
      121 gatccaagat tgagtctagc tattcatgag ggtaaaaaaa attttccaat aggaactgca
      181 acttatgaag aggcagatag actaggtaaa atttgggttg gtgagggtgc aagacaaact
      241 agtggaggcg gatggttaag tagagatggc actcgacaat atcggccacc aacagaaaaa
      301 aaaatcacaa tttgcaacta caggtattca agcaaatttt gaaacttata ctattgattc
      361 aaatgaaaaa agaaataaaa ttaaaaatgg acatttaaat attaggtaat tatatgagat
      421 taaaattaaa aaattatgat tgttctgact ttgatttgga agatttccca caagacaagt
      481 tagaaaattt ttgtatactt ttgacattat caataggttt tgatgaaagt aatggtgctg
      541 attattttta tgtttatata tatagcaccg aatggttact ttcaaatata catagaccga
      601 tgtcattaaa aaactcaatt gttacaaacc gttttaatat tgaacacata ttaaaattga
      661 taaatgatat attggaaata tgtaattcaa cgtctgaaga taagtctata tcaaatttgg
      721 caaaatattt tgactgggaa tttgacgatt ataatctaaa tatcc
//
LOCUS       DAXFZM010000178          763 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.180, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000178 DAXFZM010000000
VERSION     DAXFZM010000178.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 763)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 763)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..763
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.180"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(151..357)
                     /locus_tag="ACFJAG_002145"
     CDS             complement(151..357)
                     /locus_tag="ACFJAG_002145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPCC family cysteine-rich protein"
                     /protein_id="HFC3981334.1"
                     /translation="MMENSKKTWEIDGEIWLHCPVCGTEVMDYDICDVCQWQNTGETN
                     IDGGPNEMTLAEAKEAYAKGLPIR"
     gene            complement(323..>763)
                     /gene="mafB"
                     /locus_tag="ACFJAG_002146"
     CDS             complement(323..>763)
                     /gene="mafB"
                     /locus_tag="ACFJAG_002146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 3"
                     /protein_id="HFC3981335.1"
                     /translation="MAGKNKPPKPSTQQHSTHSDNNIGLPAPYVKPDTSISPTGTIQD
                     RIRWTKSKFPTEKSLNGHFKAHGKEFGDITIEDYQKMASDLLSKQTSDKILGYQTEHR
                     RVRYDINNNIYVLANPKTFKIKTMFKPNLGKEYYDGEFKKDMGN"
BASE COUNT          195 a          142 c          135 g          291 t
ORIGIN      
        1 attttaaaaa atcaacaatt tttatttttc ctaaaaccaa atcttcgact aactgggttg
       61 cataaataat atcatttatg attttaacag gtaaattatt tgatgggtaa ccatgggatt
      121 ccgtcatcat tggtttctct aggtgcttat ttatctgatt ggtaagcctt ttgcgtaagc
      181 ttctttcgcc tccgcaagtg tcatttcatt aggaccacca tctatattag tttctcctgt
      241 attttgccac tgacaaacgt cacagatatc atagtccata acttcagttc cgcaaacagg
      301 acaatgtagc catatttctc cgtcaatttc ccatgtcttt tttgaattct ccatcataat
      361 actcctttcc taagtttggt ttaaacattg ttttgatttt gaatgttttt ggattggcca
      421 aaacatagat attgttattg atatcatagc gcactcgtct atgttccgtc tgataaccta
      481 atatcttgtc cgatgtctgt tttgataaca aatcagacgc cattttttgg tagtcttcaa
      541 tggttatatc gccaaattct tttccatgag ctttgaaatg tccatttaaa gatttctcag
      601 taggaaactt ggattttgtc catctgatgc ggtcttgaat tgttcctgtc ggagaaatag
      661 atgtatcagg tttaacatat ggggcaggta agccgatatt gttatcagag tgtgtagagt
      721 gttgctgcgt acttggtttc ggtggcttat ttttcccggc cat
//
LOCUS       DAXFZM010000179          760 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.181, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000179 DAXFZM010000000
VERSION     DAXFZM010000179.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 760)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 760)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..760
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.181"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..306
                     /locus_tag="ACFJAG_002147"
     CDS             <1..306
                     /locus_tag="ACFJAG_002147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017147284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siphovirus Gp157 family protein"
                     /protein_id="HFC3981336.1"
                     /translation="IGRMTGKLKAAKARNQSLKDYLARNMQAAGITEIKADDGTFKAS
                     FRKSEAVVILDEAQIPAEFMREAVKTEPDKTAIRKAIESGRQVAGAKIEGRKNLQIR"
     gene            358..573
                     /locus_tag="ACFJAG_002148"
     CDS             358..573
                     /locus_tag="ACFJAG_002148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981337.1"
                     /translation="MSYLEDVKNALRVIDNLCKEALKEPESLEGYIDEIRDKADEADT
                     SLEFLKDVINYGISDLKNVIEVFEDCV"
BASE COUNT          273 a          142 c          196 g          149 t
ORIGIN      
        1 atcgggcgga tgaccgggaa gctcaaggcg gcaaaagcgc ggaatcaaag cctgaaagac
       61 tacttggcgc gcaatatgca ggcggcgggc attaccgaaa tcaaagcgga cgacggcact
      121 tttaaagcct cgttccgcaa atccgaagcc gtcgtgatct tagacgaagc acaaatcccc
      181 gccgaattta tgcgtgaggc cgtcaaaacc gaaccggaca aaaccgccat cagaaaagcg
      241 attgaaagcg gtcggcaagt agcaggcgcg aagattgaag ggcggaagaa tttgcagatt
      301 agataaaccg tagaagatgt tgacgacagc atcccatttt gagttaagga gcaaaaaatg
      361 agctatttgg aagatgtaaa aaacgcatta agggtaatag ataacttatg caaagaagca
      421 ttaaaagagc ctgaatcgtt agagggttat atagacgaaa ttagggataa agcagacgaa
      481 gcggatacct ctttggaatt tctaaaggat gtaataaatt atggtattag cgatttaaaa
      541 aatgtaattg aggtgtttga agattgcgtt tgatattaat ggaacaagac atgaactatc
      601 aatttaaatt cggcgacccc gtgagagata cagctttatg attgggcatt gagagaacgg
      661 catcaaaaaa tcgagaaaac aaaatgcaaa cagtagcaac aaaaccgacg gcaaaacaga
      721 tgcttgccgc caaacgcgcg gcgaaggaat caacgcggca
//
LOCUS       DAXFZM010000180          709 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.182, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000180 DAXFZM010000000
VERSION     DAXFZM010000180.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 709)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 709)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.182"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            189..>709
                     /locus_tag="ACFJAG_002149"
     CDS             189..>709
                     /locus_tag="ACFJAG_002149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02594 family protein"
                     /protein_id="HFC3981338.1"
                     /translation="MTELPWIAEARRHIGLKEIPGAKHNPTIVQWLKETGGFPGAAKS
                     WYFEDETPWCGLFVGHCLGKAGRAVIRDWYRAKAWSMSGLTKLEAPAYGCIAVKPRRG
                     GGHVFFVVGKDAEGRILGLGGNQGNMVSIIPFDPADIDGYFWPSKLIGGKPVPSSPAE
                     GRYRLTAAAATAK"
BASE COUNT          167 a          184 c          209 g          149 t
ORIGIN      
        1 gcaactttgt tttttatttt gtgttgacgg gcaacatatc atctgcgcgg aaagttaccg
       61 tatcggcaaa cgcgactgaa aaagacagcg tgttcggcga tgcggtgcac attgtgattg
      121 cgacttaaaa catagaacga gttgccaacc caaagtttac atctcgtctt ttaccgaaag
      181 gattaaaaat gacagaatta ccgtggatag ccgaagcgag aaggcacatc ggtttgaaag
      241 aaattcccgg cgcgaaacac aatccgacga ttgtgcaatg gctcaaagag acgggcggct
      301 tccccggcgc ggcaaagtct tggtattttg aagacgaaac gccgtggtgc ggcctgtttg
      361 tcggacactg cctgggcaaa gcgggacgcg cggtcatcag ggactggtat cgcgccaagg
      421 cttggtcaat gtcgggtttg acgaaactcg aagcccccgc atacggctgc atcgcggtca
      481 aaccgcgccg gggcggcgga cacgtgttct tcgttgtcgg caaagacgcg gaaggcagaa
      541 tcttgggctt gggcggcaat cagggcaata tggtatccat catcccgttt gaccctgcgg
      601 acattgacgg ctacttctgg ccgtccaagc tgattggcgg caaacctgtg ccgtcgtccc
      661 ccgccgaagg gcgttaccgg ttgactgccg ccgccgccac ggcgaaaca
//
LOCUS       DAXFZM010000181          708 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.183, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000181 DAXFZM010000000
VERSION     DAXFZM010000181.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 708)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 708)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..708
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.183"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..392
                     /locus_tag="ACFJAG_002150"
     CDS             <1..392
                     /locus_tag="ACFJAG_002150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HFC3981339.1"
                     /translation="WPENNDSAGVASASKIIGKYVKEVKVENGVVTATMNSSNVNKEI
                     KGKKLSLWAKRQAGSVKWFCGQPVTRANVAAANDDDVTDDKNNNGIDTKHLPSTCRDE
                     STAVCIETPRADFKHFQKISRHRVLPE"
     gene            358..708
                     /locus_tag="ACFJAG_002151"
                     /pseudo
     CDS             358..708
                     /locus_tag="ACFJAG_002151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981065.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
BASE COUNT          234 a          204 c          160 g          110 t
ORIGIN      
        1 aatggccgga aaacaacgac tctgccggcg tggcatccgc ttcaaaaatc ataggcaaat
       61 atgttaagga agttaaagtc gaaaacggcg tcgtcaccgc cacaatgaat tcaagcaacg
      121 taaacaaaga aatcaaaggc aaaaaactct ccctgtgggc caagcgtcaa gccggttcgg
      181 taaaatggtt ctgcggacag ccggttacgc gcgccaacgt tgccgccgcc aacgacgacg
      241 acgttaccga cgacaaaaac aacaacggca tcgacaccaa gcacctgccg tcaacctgcc
      301 gcgatgaatc aactgccgtt tgcatagaaa caccacgcgc cgatttcaaa cacttccaaa
      361 aaatcagccg tcaccgagta ttacctgaat aacggcaaat ggccgaaaaa caacgacgag
      421 gccggcgtgg catcttcttc atcaatcaaa ggcaaatatg ttaaggaagt taaagtcgaa
      481 aacggcgtcg tcaccgccca aatggcttca agcaacgtaa acaaagaaat caaagacaaa
      541 agactctccc tgtgggccaa gcgtgaaaac ggttcggtaa aatggttctg cggacggccg
      601 gttcagcgca acgccaacga cgccgccaaa gacgacgtca ccgccgtcac cgacaacaac
      661 aacatcgaaa ccaagcacct gccgtcaacc tgccgcgata cgtcaatg
//
LOCUS       DAXFZM010000182          706 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.184, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000182 DAXFZM010000000
VERSION     DAXFZM010000182.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 706)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 706)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..706
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.184"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..437
                     /gene="mafB"
                     /locus_tag="ACFJAG_002152"
     CDS             <1..437
                     /gene="mafB"
                     /locus_tag="ACFJAG_002152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="polymorphic toxin MafB class 3"
                     /protein_id="HFC3981340.1"
                     /translation="KWDWVKNTGYEKPAARPMQTVDGEMAGGNKPIKSLPNSAAEKRK
                     QSFKKFSSNWSSASFDSVHKTLTPNAPGILSPDKVKTRYTSLDGKITIIKDNENNYFR
                     IHDNSRKQYLDSNGNAVKTGNLQGKQAKDYLQQQTHIRNLDK"
     gene            434..>706
                     /locus_tag="ACFJAG_002153"
     CDS             434..>706
                     /locus_tag="ACFJAG_002153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMP12 family DNA mimic protein"
                     /protein_id="HFC3981341.1"
                     /translation="MNEHNLLIFCLKDNVSISEYTEMVDWAYENIQSETVVEITENQI
                     IEYQNRGLWRLVSEITDNWLFGPSEGDWLIDKESILTVKEKLQNSDF"
BASE COUNT          277 a          102 c          131 g          196 t
ORIGIN      
        1 ccaaatggga ttgggttaaa aataccggct atgaaaaacc tgctgcccga cctatgcaga
       61 ctgttgacgg ggaaatggca ggtgggaata aacctattaa atctttacca aacagcgccg
      121 ctgaaaaaag aaaacaaagt tttaagaagt ttagtagcaa ctggagttca gcaagttttg
      181 attcagtgca caaaacacta actcccaatg cacctggtat tttaagtcct gataaagtta
      241 aaactcgata cactagttta gatggaaaaa ttacaattat aaaagataac gaaaacaact
      301 attttagaat ccatgataat tcacgaaaac agtatcttga ttcaaatggt aatgctgtga
      361 aaaccggtaa tttacaaggt aagcaagcaa aagattattt acaacaacaa actcatatca
      421 ggaacttaga caaatgaatg aacacaacct gttaattttc tgtttaaaag acaatgtttc
      481 aattagtgaa tatactgaaa tggttgattg ggcttatgaa aacattcaat ctgaaacagt
      541 tgtagaaatt acggaaaatc aaattattga atatcaaaat cgtggattat ggagacttgt
      601 ttctgaaatt accgataatt ggttatttgg accaagtgag ggggattggc taatagataa
      661 ggaaagtatt ttgactgtaa aagaaaaatt acaaaattca gatttt
//
LOCUS       DAXFZM010000183          702 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.185, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000183 DAXFZM010000000
VERSION     DAXFZM010000183.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 702)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 702)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..702
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.185"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..447
                     /locus_tag="ACFJAG_002154"
     CDS             <1..447
                     /locus_tag="ACFJAG_002154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IgG-binding virulence factor TspB family
                     protein"
                     /protein_id="HFC3981342.1"
                     /translation="DLNPDANPDTDGQPGTSPDSPAVPDRPNGRHRKERKEGEDGGLS
                     CDYFPEILACQEMGKPSDRMFHDISIPQVTDDKTWSSHNFLPSNGVCPQPKTFHVFGR
                     QYRASYEPLCVFAEKIRFAVLLAFIIMSAFVVFGSLGGNKCHYFPA"
     gene            426..>702
                     /locus_tag="ACFJAG_002155"
     CDS             426..>702
                     /locus_tag="ACFJAG_002155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2523 domain-containing protein"
                     /protein_id="HFC3981343.1"
                     /translation="MPLLSGLIPLLGILLKMLIVRIILATGLTFVTYAGYLAALEKFK
                     GYTANAINSMPSDILNLLLISGFGQGLGCLFGAFSFFIGMHAFKKLTF"
BASE COUNT          169 a          177 c          169 g          187 t
ORIGIN      
        1 gatttgaatc ccgatgcaaa tcccgatacg gacggacagc ccggaacaag ccccgattcc
       61 ccggccgttc cggaccgccc aaacggcagg catcgcaaag aaaggaaaga aggcgaagac
      121 ggcgggcttt cgtgcgatta ttttccggaa atcctagcct gtcaggagat gggcaaacct
      181 tcggaccgca tgtttcacga tataagcata ccgcaggtta cagacgataa aacatggtct
      241 tcacataact ttttaccgtc taacggcgta tgtccgcagc cgaaaacctt tcatgttttc
      301 ggcaggcaat atcgggcaag ctatgaaccg ttgtgcgtgt ttgccgaaaa aatccggttt
      361 gccgtactgc tcgcctttat cattatgtcg gcttttgtcg ttttcggttc gttggggggg
      421 aataaatgcc attactttcc ggcctgattc cacttttagg catacttctg aaaatgctga
      481 ttgtcagaat catccttgca acaggtctga cattcgtaac ctatgccggg tatctcgccg
      541 cactggaaaa gttcaaaggc tacacggcaa atgcgatcaa ttccatgcct tccgacatat
      601 tgaaccttct tttaatttcg ggattcggtc aggggttggg ctgcctgttc ggcgcattct
      661 cgttcttcat tggtatgcac gcattcaaaa aactgacgtt tg
//
LOCUS       DAXFZM010000184          674 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.186, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000184 DAXFZM010000000
VERSION     DAXFZM010000184.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 674)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 674)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..674
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.186"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            68..>674
                     /locus_tag="ACFJAG_002156"
     CDS             68..>674
                     /locus_tag="ACFJAG_002156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HFC3981344.1"
                     /translation="MSARLMGMAFKTGIPRGQRFVLVKLCDCANDEGLCYPSQETLAE
                     DTGFAETAVRQHIKWLKDNNFIKSARRQRGRERKSDIYRINVALLEKCYAEAAKRKAA
                     RQAKMWEEPLDYEPSDFEPSDFDTGNHQILSGEPSDFALRTVRFCAKNHQILSGEPSD
                     FDGSLYVEPSVEPSVEPSGSNARGARAPAGPHPAKPQTAPPE"
BASE COUNT          169 a          164 c          210 g          131 t
ORIGIN      
        1 gcatgaaggc gggcggccgc gggaagcctg ttacgcatta ttcgattgtc aaaaacggag
       61 cggaagtatg agtgcgaggc tgatggggat ggctttcaaa acgggtatcc cgagggggca
      121 gcgttttgtt ttggtgaagt tgtgcgactg cgccaacgac gagggcttgt gttatccgtc
      181 gcaagaaacg ctggcggaag atacgggctt cgccgaaacc gccgtacggc agcatatcaa
      241 gtggctgaag gataacaatt tcatcaagtc cgcccggcgg cagagggggc gggagaggaa
      301 gtccgacatc taccgcatca acgtcgccct gcttgaaaaa tgctatgcgg aggcggcaaa
      361 acggaaggcg gcgcggcagg caaaaatgtg ggaagaacca ttggattacg aaccttcgga
      421 ttttgaaccg tcggattttg acactgggaa ccatcagatt ttgagcggcg aaccgtcgga
      481 ttttgcgcta agaaccgtca gattttgcgc taagaaccat cagattttga gcggtgaacc
      541 atcagatttt gacggttcct tatatgtaga accgtcagta gaaccgtcag tagaaccgtc
      601 aggatcaaat gcgcgcggcg cgcgcgcccc tgccggaccg caccctgcga aaccgcaaac
      661 ggcgcctccc gaaa
//
LOCUS       DAXFZM010000185          670 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.187, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000185 DAXFZM010000000
VERSION     DAXFZM010000185.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 670)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 670)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..670
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.187"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            17..328
                     /gene="rpsJ"
                     /locus_tag="ACFJAG_002157"
     CDS             17..328
                     /gene="rpsJ"
                     /locus_tag="ACFJAG_002157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012504051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HFC3981345.1"
                     /translation="MANQKIRIRLKAYDYALIDRSAQEIVETAKRTGAVVKGPIPLPT
                     KIERFNILRSPHMNKTSREQLEIRTHLRLMDIVDWTDKTTDALMKLDLPAGVDVEIKV
                     Q"
     gene            complement(485..>670)
                     /locus_tag="ACFJAG_002158"
     CDS             complement(485..>670)
                     /locus_tag="ACFJAG_002158"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981346.1"
                     /translation="LKTLVGSSSFLYLLENKTSSILRIRWMLLPKPSPILPFFGGQAL
                     GKLWIKNILFCSLKNAV"
BASE COUNT          209 a          137 c          145 g          179 t
ORIGIN      
        1 tgaaggatat tgataaatgg caaaccaaaa aatccgtatc cgcctgaaag cttatgatta
       61 cgccctgatt gaccgttctg cacaagaaat cgttgaaact gcaaaacgta ccggtgctgt
      121 tgtaaaaggc ccgattcctt tgccgaccaa aatcgagcgt ttcaacattt tgcgttctcc
      181 gcacatgaac aaaacttccc gtgaacaatt ggaaatccgc acccatttgc gcctgatgga
      241 catcgtggat tggaccgata aaactaccga tgcgctgatg aagctggatt tgccggccgg
      301 tgttgatgta gaaatcaaag tccaataatt cggactgtcg aaaatcccca agcaatcaat
      361 gcttggggat tttttatgtt atgccgtctg aaaatatgcg gcggcaaaca gatttaaggc
      421 aaaacaacaa aatcaaaaaa cagtgcggtc ggtgaaatcg gcttattttg tgcctcaaga
      481 attttcagac ggcatttttt agtgaacaaa acaggatatt ttttatccat aactttccta
      541 aggcttgccc cccgaaaaaa ggtagaatcg ggcttggttt gggcagaagc atccatctga
      601 ttctaaggat ggatgatgtt ttattctcaa gtaaataaag gaaagatgat gagcctacta
      661 atgtctttaa
//
LOCUS       DAXFZM010000186          592 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.188, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000186 DAXFZM010000000
VERSION     DAXFZM010000186.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 592)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 592)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..592
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.188"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(42..230)
                     /locus_tag="ACFJAG_002159"
     CDS             complement(42..230)
                     /locus_tag="ACFJAG_002159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mafB"
                     /protein_id="HFC3981347.1"
                     /translation="MEEVKANPQGKTPARIPPMSDTKNGWLAKDGWVKRVQNINKVEI
                     HYIENTRTGEKTDFKFKD"
     gene            complement(298..592)
                     /locus_tag="ACFJAG_002160"
                     /pseudo
     CDS             complement(298..592)
                     /locus_tag="ACFJAG_002160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225727.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
BASE COUNT          135 a          136 c          113 g          208 t
ORIGIN      
        1 taaatcatct aaaaaaacat ttacatcatc taaaaacatg gctaatcctt aaacttgaaa
       61 tctgttttct caccggttct tgtattttca atgtaatgta tctcaacttt gtttatattt
      121 tgaacgcgct taacccagcc gtcttttgcc aaccaaccat ttttagtatc ggacatagga
      181 ggtattctcg caggagtttt gccctgtggg tttgccttaa cttcttccat tgctaattgt
      241 tcctttaaat tattaggtat tgtacgaccg gttgattttt caacagattg tgtccctatt
      301 tttaatgatt tgtttccccc cagccatttc cctgtctaca gtctgcatat ggcgggcagt
      361 aggtttttca tagccggtat ctttaactca atcccattta gtcgggttaa gttctacttt
      421 tttacctctc caaaccgtac ctgcggcctc tgctacggca agggcagttt gggcagtagc
      481 tgtaatgttc ggatgggcat cagcccattg tctggcagag ttgataccgt cttttaccgc
      541 aaaagcactg tcctgtaata ggctcacggc ggcaagttgt gcttccggac tt
//
LOCUS       DAXFZM010000187          579 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.189, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000187 DAXFZM010000000
VERSION     DAXFZM010000187.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 579)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 579)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.189"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            255..>579
                     /locus_tag="ACFJAG_002161"
     CDS             255..>579
                     /locus_tag="ACFJAG_002161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981348.1"
                     /translation="MTKLYAEIAEMEAQDDGTVKVWGYASSEAVDSDGEVIAAAAMKA
                     AIPDYMKFGEVREMHGSNAAGTAIEINVEDDGRTFFGAHIVDPVAVEKVKTGVYKGFS
                     IGGSVT"
BASE COUNT          170 a          129 c          162 g          118 t
ORIGIN      
        1 caaaaataaa atagggaggg atgtcgtgat atttgaaaaa tcaataaacg gctggaaata
       61 ccgcgccgta atggaaatca gaaccacgca aaaggagctt gccttgaaca gcctttatac
      121 aacagacagg attgaatagt catgacaaaa cctgcgacga gtaactgtca atctttcgat
      181 tccgtcctca tacatcctaa gcgtctttgc aaattctgtt cagttatacc atttatacag
      241 acaggagcaa accaatgacg aagttatacg cagaaatcgc cgaaatggag gcgcaggacg
      301 acggcacggt caaagtttgg ggttatgcct caagcgaggc ggtcgattcg gacggcgaag
      361 tcatcgcggc ggcggctatg aaggcggcga ttcccgatta tatgaagttc ggcgaggtgc
      421 gcgagatgca cggcagcaac gcggcgggaa cggcgattga aatcaacgtg gaagacgacg
      481 gcagaacctt tttcggggcg catatcgtcg atcccgttgc agtggagaaa gtcaaaacgg
      541 gcgtttacaa gggcttttcc atcggcggca gcgttaccg
//
LOCUS       DAXFZM010000188          576 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.190, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000188 DAXFZM010000000
VERSION     DAXFZM010000188.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 576)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 576)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..576
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.190"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..489
                     /locus_tag="ACFJAG_002162"
     CDS             <1..489
                     /locus_tag="ACFJAG_002162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="opacity family porin"
                     /protein_id="HFC3981349.1"
                     /translation="WNNNKYSVSIKELLRNKGNGNRTDQKTENQENGTFHAVSSLGLS
                     AVYDFKLNDKFKPYIGARVAYGHVRHSIDSTKKTIEVTTVPSNAPNGAVTTYNTDPKT
                     QNDYQSNSIRRVGLGVIAGVGFDITPKLTLDAGYRYHNWGRLENTRFKTHEASLGVRY
                     RF"
BASE COUNT          165 a          170 c          132 g          109 t
ORIGIN      
        1 tggaacaaca ataaatattc cgtgagcata aaagagttgc taagaaacaa gggcaatggc
       61 aacaggacag accaaaagac ggaaaatcag gaaaacggta cgttccacgc cgtttcttct
      121 ctcggcttat cagccgttta cgatttcaaa ctcaacgaca aattcaaacc ctatatcggc
      181 gcgcgcgtcg cctacggaca cgtcagacac agcatcgatt cgaccaaaaa aacaatagag
      241 gttactaccg tccccagcaa tgctcctaac ggagcagtta caacttataa tactgatcca
      301 aagacgcaaa acgattacca aagcaacagc atccgccgcg tgggtctcgg tgtcatcgcc
      361 ggcgtcggtt tcgacatcac gcccaagctg accctggacg ccggctaccg ctaccacaac
      421 tggggacgcc tggaaaacac ccgcttcaaa acccacgaag cctcgttggg cgtgcgctac
      481 cgcttctgat tcgccgattc cgatgccgtc tgaaccttca gacggcattt ttaatcgccc
      541 gccgtttacg ggcgcggggc gggcgcagta aaatac
//
LOCUS       DAXFZM010000189          558 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.191, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000189 DAXFZM010000000
VERSION     DAXFZM010000189.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 558)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 558)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.191"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            128..502
                     /locus_tag="ACFJAG_002163"
     CDS             128..502
                     /locus_tag="ACFJAG_002163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HFC3981350.1"
                     /translation="MIIQNEFNLYPSNMLPEGFCYPEKYVRISNDTSLIPYIQPHNFH
                     WWFENYGTEGAEVAYIFKNSILPDLNLIPFASNGEWEAYFDGNDVTGNPRVIVINLDN
                     IENHEFFNSFEEWLELAIKDTW"
BASE COUNT          192 a           78 c          106 g          182 t
ORIGIN      
        1 gatgccgcaa acatggggag aagctattca atttagaatt aaaaaaacaa agtgaaaatg
       61 gactagcacc accaaattgg tctacccagt ttcctaatgg tagtatttat gatactaagg
      121 taacgaaatg attattcaaa atgaatttaa tttatatcct agtaatatgc ttcctgaagg
      181 gttttgttat cctgaaaagt atgttcgtat ctctaacgat acatctttaa taccttatat
      241 tcagccacat aattttcact ggtggtttga gaattatgga acagaagggg cagaagtagc
      301 ttatatattt aaaaattcca tcctgcctga tttaaatctt atcccattcg ctagtaatgg
      361 agaatgggaa gcttattttg atggtaatga tgtaacagga aatcctaggg ttattgttat
      421 taatttagat aatatagaaa accatgaatt ttttaatagt tttgaagagt ggcttgaatt
      481 agcaattaag gatacttggt aagcagctat ctataaagag atgaggccgt cctggacaac
      541 taggataaac tcgatttt
//
LOCUS       DAXFZM010000190          543 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.192, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000190 DAXFZM010000000
VERSION     DAXFZM010000190.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 543)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 543)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..543
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.192"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
BASE COUNT          125 a          180 c          132 g          106 t
ORIGIN      
        1 accgtaatct cgaaacccgt cattcccgcg caggcgggaa tccggacctg tccgcacgga
       61 aacttatcgg ataaaaacag ttgcccaaac cccgcgtcct agattcccac ttccgtggga
      121 atgacggttc ggttgcgttc cgacaacacc gcaatcttaa aacccgtcat tcccgacaac
      181 accgtaatct cgaaacccgt cattcccgcg caggcgggaa tccggacccc tgacgcggcg
      241 ggaatctatc ggaaataact gaaaccccgc gtcctagatt cccacttccg tgggaatgac
      301 ggttcggttg ctacggcccg ctgattcccc gacaccgatg ccgtctgaac cttcagacgg
      361 catttttgat gcgctcgccg tttacaggcg cggggcgggc ttggaaatac ccgaaccgtc
      421 attcccgaca ataccgcaat ctcgaaattc gtcattcccg cgcaggcggg aatccggacc
      481 cccgacgcgg cgggaatcta tcggaaatga ctgaaacccc gagattctag attcccactt
      541 ccg
//
LOCUS       DAXFZM010000191          508 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.193, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000191 DAXFZM010000000
VERSION     DAXFZM010000191.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 508)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 508)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.193"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..>508
                     /locus_tag="ACFJAG_002164"
     CDS             <1..>508
                     /locus_tag="ACFJAG_002164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="septum formation inhibitor Maf"
                     /protein_id="HFC3981351.1"
                     /translation="KWDWVKNTGYKKPAARHMQTLDGEMAGGNKPAKQATPNGKAGVS
                     TQQSLQNSLVPQKNYTHTTYNGGSAITDGKYITDPLSMVRHKPDASSLDKIDSKSLFK
                     SDVDVEKATLDAARYADKHNLWDSQNKAKVPTNDVVGYTDGKPTHIINIYRRKPNKDG
                     IRPVHGTPG"
BASE COUNT          186 a           93 c          107 g          122 t
ORIGIN      
        1 ctaaatggga ttgggttaaa aataccggct ataaaaaacc tgctgcccgc catatgcaga
       61 ctttagatgg ggagatggca ggtgggaata agccagcgaa gcaagctact cctaatggca
      121 aagctggcgt ttctacacaa caatctttgc aaaatagtct cgttccacaa aaaaattata
      181 cgcatactac ctataatggt ggatcagcta ttacagatgg caaatatatt actgaccctc
      241 tcagtatggt acgacacaaa cctgatgcat ctagtctaga caagatagat agcaaaagtt
      301 tatttaaatc agatgttgat gtggaaaaag ctacattaga tgctgctaga tatgcagata
      361 aacataattt atgggatagt caaaataagg caaaagttcc aacgaacgac gtagttggct
      421 atacagacgg aaaaccgaca catataatta acatttatcg tagaaagccg aataaagatg
      481 ggattagacc tgtgcatgga acaccagg
//
LOCUS       DAXFZM010000192          491 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.194, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000192 DAXFZM010000000
VERSION     DAXFZM010000192.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 491)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 491)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..491
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.194"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            12..248
                     /locus_tag="ACFJAG_002165"
     CDS             12..248
                     /locus_tag="ACFJAG_002165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HFC3981352.1"
                     /translation="MAMSIQKAVDYFGNESRLARAIGVKQPTVWAWNKKGTPPPIIRC
                     VQIEKLTGGAVNRKDLRPDDWHLIWPELAGDQPK"
     gene            328..483
                     /locus_tag="ACFJAG_002166"
     CDS             328..483
                     /locus_tag="ACFJAG_002166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981353.1"
                     /translation="MKKQDRNRLSKKDRRLIKKAMLKAAAKGCDEVYRIAPGLKDGFE
                     LLGKQPD"
BASE COUNT          162 a           99 c          130 g          100 t
ORIGIN      
        1 taattgagta actggctatg agtatccaaa aagcagttga ttattttggt aatgaatccc
       61 gacttgcacg ggcgatcgga gttaaacaac cgacggtgtg ggcttggaat aaaaaaggaa
      121 cgccgccccc gatcattcgg tgcgtgcaga ttgaaaaatt aaccggaggc gcagtgaatc
      181 gaaaagactt acgtcctgat gactggcatc taatctggcc ggaattggca ggcgaccaac
      241 ccaaataaaa agcccgtcgg gtcagatgtt aattgatata accgaattga agcggaagtc
      301 atccgcaatt taccggaaag aaaaaaaatg aagaagcagg acagaaaccg cctgtcgaag
      361 aaagacagac ggctgattaa aaaggcgatg ctgaaagccg ccgccaaagg ctgcgatgag
      421 gtttacagaa tcgcgccggg tttgaaagac ggctttgaat tacttggaaa gcagcccgat
      481 taaatattcg t
//
LOCUS       DAXFZM010000193          464 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.195, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000193 DAXFZM010000000
VERSION     DAXFZM010000193.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 464)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 464)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..464
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.195"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..301
                     /locus_tag="ACFJAG_002167"
     CDS             <1..301
                     /locus_tag="ACFJAG_002167"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981354.1"
                     /translation="QALVEIPNKRFKTCRCRGSHIQLATVRLCRWVALPLPELRNGCL
                     PWAGAGGGRAVCRYDTVIPIYKRWAEAYHFHQSNISTVFIESIESAPFDNPTLYN"
BASE COUNT          101 a          142 c          120 g          101 t
ORIGIN      
        1 gcaggcgttg gtggaaatcc cgaataagcg gttcaaaacg tgtcgctgcc gcggcagcca
       61 tatacagttg gcaactgtcc ggctgtgccg atgggttgcc ctgccgctcc ctgagctacg
      121 caacggttgt ctgccttggg cgggcgcggg tggcggccgg gcggtttgtc gctatgatac
      181 ggtgattccg atatacaagc ggtgggctga agcctaccat ttccatcaat ccaacatttc
      241 taccgttttc attgaatcca tcgaatccgc ccctttcgac aatccgaccc tatacaactg
      301 aaccgtcatt cccgcacagg cgggaatcta gacccgtcgg cacggaaacc tgcatcccgt
      361 cattcccaca aaagtgggaa tccggaacgc aaaatctcaa gaaaccgttt tacccgataa
      421 gtttccgtgc cgacagaccc ggattcccgc ccgcgcgcaa gttt
//
LOCUS       DAXFZM010000194          457 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.196, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000194 DAXFZM010000000
VERSION     DAXFZM010000194.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 457)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 457)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..457
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.196"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..69
                     /locus_tag="ACFJAG_002168"
     CDS             <1..69
                     /locus_tag="ACFJAG_002168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HFC3981355.1"
                     /translation="EFRLNFGTPSRQLKILRDRCGI"
     gene            complement(203..394)
                     /locus_tag="ACFJAG_002169"
     CDS             complement(203..394)
                     /locus_tag="ACFJAG_002169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981356.1"
                     /translation="MLPTRSVSSLLLGKYLEFEENGTKIAAEIGSAWHFLGAACRISI
                     NGKYYAGNRIVWFAKKAES"
BASE COUNT          154 a          113 c           74 g          116 t
ORIGIN      
        1 gaatttcgac ttaacttcgg cacaccgtcc cggcagctaa aaatcctgcg ggatcggtgt
       61 ggaatttagg gataatctag tacagcccct aagataaaga aacggcaaca cacgccaaca
      121 gaaaaacata tttgaacttc atcatatttt ccacataaaa ggcagcctga aaatctttca
      181 ggctgccctt gtcaaattat tcctagcttt cggctttttt ggcaaaccaa acaatccgat
      241 tacccgcata atactttcca tttattgaaa tccgacaagc cgcgcccaaa aaatgccatg
      301 cactgccgat ttccgcagca atctttgtac cgttttcttc aaattccaaa tatttaccca
      361 ataataaact tgaaacagaa cgcgtgggca gcaagtgccc accctacgct tatccaaata
      421 atttgattaa ataaagaata aagaaaatgc atcagga
//
LOCUS       DAXFZM010000195          429 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.197, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000195 DAXFZM010000000
VERSION     DAXFZM010000195.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 429)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 429)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.197"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..>429
                     /locus_tag="ACFJAG_002170"
     CDS             <1..>429
                     /locus_tag="ACFJAG_002170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HFC3981357.1"
                     /translation="SVELLLGIVGLPRSTFYYQLAVQSAEGKYADLKRHIHDIYQRYK
                     GRYGYRRIAAAIRHAGIPVNHKKVSRLMAKTGLKAVIRRRKYRSFKGEVGKVAPNILQ
                     RCFHSEKPNEKWVTDVTEFDVGGEKIYLSPIMDLFNGEIV"
BASE COUNT          124 a           97 c          116 g           92 t
ORIGIN      
        1 catccgttga actgctgttg gggattgtcg gactgccacg cagcaccttc tattaccaat
       61 tggccgtcca atcggcagaa ggcaaatatg ccgatttgaa acgacatatc catgatattt
      121 atcaacgata taagggaaga tacggctacc ggaggattgc ggcagccatc cgtcacgcag
      181 gaataccggt caatcacaag aaagtcagcc gtctgatggc gaagacgggg ctgaaggcag
      241 tgatacggcg gcgcaaatac cgctcgttca aaggagaagt cggcaaagtt gcgccgaaca
      301 tcctgcaacg ctgtttccat tcagaaaagc cgaatgagaa atgggtaacg gacgttaccg
      361 agttcgatgt aggcggagaa aagatatacc tttctccgat tatggatttg tttaacgggg
      421 aaatcgtca
//
LOCUS       DAXFZM010000196          404 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.198, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000196 DAXFZM010000000
VERSION     DAXFZM010000196.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 404)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 404)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.198"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..269
                     /locus_tag="ACFJAG_002171"
     CDS             <1..269
                     /locus_tag="ACFJAG_002171"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981358.1"
                     /translation="LLQPCRLQNQHRHAGARFCEMREGAECGGKSDVLPANQSVRRRG
                     VSDGIGGGSRKKDGGAWGISPRNAPNLSGKAGKTLWEYPSLPEI"
BASE COUNT          119 a          112 c          117 g           56 t
ORIGIN      
        1 ttctattgca accatgccga cttcaaaacc aacaccggca cgccggtgcg cggttttgcg
       61 aaatgcgcga aggcgcggaa tgcggaggaa aaagcgacgt actacccgcg aaccaatccg
      121 tgcgccgccg gggcgtttca gacggcatcg ggggcggcag tcgcaaaaag gacggcggtg
      181 cttggggaat atccccccgc aatgcgccga atttgagcgg gaaggcgggt aaaacgcttt
      241 gggaatatcc cagcctaccc gagatttaaa aaacgcgtta aaacgcaaat ttgaaaggaa
      301 atacggaatg acggtgcaaa acacgcaaac cgaaaccgtc cggacggaag ccgcgccgca
      361 acaaggcggc aataccaacc cgggctatta caaaaaccgc gaac
//
LOCUS       DAXFZM010000197          399 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.199, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000197 DAXFZM010000000
VERSION     DAXFZM010000197.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 399)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 399)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..399
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.199"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            209..>399
                     /locus_tag="ACFJAG_002172"
     CDS             209..>399
                     /locus_tag="ACFJAG_002172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981359.1"
                     /translation="MKKSLFAAALLSLALAACGGEKAAEAPAAEASSTEAPAAEAPAA
                     EAPAAEAPAAEAPAAEAPAA"
BASE COUNT           98 a          114 c           81 g          106 t
ORIGIN      
        1 acagcaaaac cgttttacag gatttatcaa tccgcccgcc agaaaacttt tcattcaaac
       61 ctttttccca tctgtacgac attgcaatcc cttattccat ggtgcataat tacgcaaatt
      121 cagcgatgaa tttccaaccc ggtttgtagc atggtcgaaa aagacctatt tgtttcaata
      181 atttaaattg attttaaagg ttactaaaat gaaaaaatcc ctgtttgccg ctgctttgtt
      241 gtctttggct ttggctgcct gcggcggaga aaaagccgct gaagctcctg ctgctgaggc
      301 ttcctctacc gaggcacctg ccgccgaagc acctgccgcc gaagcacctg ctgccgaagc
      361 tcccgctgcc gaagcacctg ccgccgaagc tcccgctgc
//
LOCUS       DAXFZM010000198          389 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.200, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000198 DAXFZM010000000
VERSION     DAXFZM010000198.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 389)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 389)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.200"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
BASE COUNT          132 a           62 c           71 g          124 t
ORIGIN      
        1 aaaaatatct ttaaatgtaa acatttgtag attaacgtta tgcccatcat ttcatgatga
       61 acatgatacg cttgtttgtt cagtgcaaga tttttatgta aatactgttt aactagcaag
      121 cgcaggctgg attaaaacct aaatcattga taaaaaacat aaaacaagca ttctgaaatt
      181 tttcaggctg cttttttgtt gggtttggta acccaatcta ctcgctgaaa attagcagag
      241 gacgtaaatg gctatttatg atttaaacga aatcgtaacc cgtgctgcat taggtatata
      301 taaaggaaaa tggcgaaaca tggattttga gcaagttcta caaaacattg ttcagcaacc
      361 gtaggtcgga ttctcgaatc cgacatttt
//
LOCUS       DAXFZM010000199          387 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.201, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000199 DAXFZM010000000
VERSION     DAXFZM010000199.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 387)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 387)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.201"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
BASE COUNT           95 a          115 c           84 g           93 t
ORIGIN      
        1 aaccggtacg gcgttgcccc gccttagctc aaagagaacg attctctaag gtgctgaagc
       61 accaagtgaa tcggttccgt actatttgta ctgtctgcgg cttcctcgcc ttgtcctgat
      121 ttttgttaat ccactatatc aggaaagaca aaaaaccttc cgccgtcatt cccgcgcagg
      181 cgggaatccg atccgttggg attttgcaac ttcaaatcaa tccgcaaacc ggaatcccgt
      241 cattcccgcg cagtcgtgaa tccgaacgca tccgcacgga aacccgcatc ccgtcattcc
      301 cacggaagtg ggaatctaga atgtcaaatc tcaagaaacc gttttatccg ataagttcct
      361 atgccgacgg acctggattc ccgcctg
//
LOCUS       DAXFZM010000200          353 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.202, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000200 DAXFZM010000000
VERSION     DAXFZM010000200.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 353)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 353)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..353
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.202"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..>353)
                     /gene="mafB"
                     /locus_tag="ACFJAG_002173"
     CDS             complement(<1..>353)
                     /gene="mafB"
                     /locus_tag="ACFJAG_002173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012504007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 3"
                     /protein_id="HFC3981360.1"
                     /translation="HIKGTSTKTKINTVPQAPFSDRWLKENAGAASGFLSRADEAGKL
                     IWENDPDKNWRANRMDDIRGIVQGAVNPFLTGFQGLGVGAITDSAVNPVTYAAARKTL
                     QGIHNLGNLSPEAQLA"
BASE COUNT           81 a           88 c           78 g          106 t
ORIGIN      
        1 gcaagttgtg cttccggact taaatttcct aaattgtgaa taccctgtaa agttttccgt
       61 gctgccgcat aggttaccgg gtttaccgca ctgtctgtaa ttgccccaac tcccaatccc
      121 tgaaaacccg ttaaaaaagg attaaccgca ccttggacga tgccgcgaat atcatccata
      181 cggttagccc gccaattttt atcggggtcg ttttcccata tcagttttcc tgcttcatcc
      241 gcacggctga gaaaaccgga agcggcaccg gcattttctt ttagccagcg gtctgaaaaa
      301 ggggcttgcg gaacagtgtt tatctttgtt ttggttgaag ttcctttgat atg
//
LOCUS       DAXFZM010000201          351 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.203, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000201 DAXFZM010000000
VERSION     DAXFZM010000201.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 351)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 351)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.203"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..>351)
                     /locus_tag="ACFJAG_002174"
     CDS             complement(<1..>351)
                     /locus_tag="ACFJAG_002174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="septum formation inhibitor Maf"
                     /protein_id="HFC3981361.1"
                     /translation="GKKVELNPAKWDWVKNTGYKKPAARHMQTVDGEMAGGNKPLESK
                     NTVTTNNFFENTGYTEKVLRQASNGDYHGFPQSVDAFSENGTVIQIVGGDNIVRHKLY
                     IPGSYKGKDGNFEY"
BASE COUNT           90 a           78 c           52 g          131 t
ORIGIN      
        1 tatattcaaa atttccatct tttcctttat aagatccagg gatataaagt ttatgcctta
       61 caatattatc tccgccaact atttgtatta ctgttccatt ttcagaaaaa gcatctactg
      121 attgcggaaa accatgataa tcaccattcg atgcttgcct taatactttc tctgtataac
      181 cggtattttc aaaaaaatta ttcgttgtta cagtattttt tgattccagc ggtttattcc
      241 caccggccat ttccccgtct acagtctgca tatggcgggc agcaggtttt ttatagccgg
      301 tatttttaac ccaatcccat ttggccgggt taagttctac ttttttaccg c
//
LOCUS       DAXFZM010000202          338 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.204, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000202 DAXFZM010000000
VERSION     DAXFZM010000202.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 338)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 338)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.204"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
BASE COUNT           77 a           88 c          107 g           66 t
ORIGIN      
        1 cgccggtctg aaagattgcg ggttcgacgg cggcacggag gccgcgctgc ttgccgtcat
       61 ctccgccgct tattacatcc gcgacggcga agacaatttt gcgtgggcgg ccgcctgtgt
      121 cgaagatttg ttggaaaaaa tgccgcctga agaacaacgg ttaaacaacg gttaagcaaa
      181 ccgaaaggaa ataaaacaat ggataccctg ttaagcatca tcaccgcgct gtcgtttgcc
      241 ggggcggcga cgttggcggt atggcttttg gtggaagccg ccgacgcggt tttgcgccgc
      301 aagcgcgacg gcaaaggcga agacgacttc gacggctt
//
LOCUS       DAXFZM010000203          325 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.205, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000203 DAXFZM010000000
VERSION     DAXFZM010000203.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 325)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 325)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..325
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.205"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(26..>325)
                     /locus_tag="ACFJAG_002175"
     CDS             complement(26..>325)
                     /locus_tag="ACFJAG_002175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981362.1"
                     /translation="QRNRQDNVQNIISSVFQTVRGPRHSHLSVICFVKERCEIIKYPF
                     RLSKISLDISDIPCYTFQFVRRFGSGEEPNYTPAGENSQYFQRDFFGEIRHVAVG"
BASE COUNT           91 a           69 c           81 g           84 t
ORIGIN      
        1 cagcgtttgg cggagataaa aaaccttatc cgacagcgac atgacgaatt tccccaaaaa
       61 aatcccgctg aaagtattga ctgttttccc ctgcgggcgt atagttcggt tcttcgccgc
      121 tgccgaagcg gcggacgaac tgaaaagtat agcacggaat gtcggaaata tcgagagata
      181 tcttagacag gcggaaggga tactttataa tttcgcaacg ctctttaaca aaacagatta
      241 ccgataagtg tgagtgcctt gggcctcgca ctgtttgaaa gacagacgag atgatgtttt
      301 gaacattgtc ctgtcggttt ctttg
//
LOCUS       DAXFZM010000204          308 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.206, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000204 DAXFZM010000000
VERSION     DAXFZM010000204.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 308)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 308)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..308
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.206"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..197
                     /locus_tag="ACFJAG_002176"
     CDS             <1..197
                     /locus_tag="ACFJAG_002176"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981363.1"
                     /translation="NRTDSGEPIGFEFNNADNTVTGNADITVKPADPSQHSRPKGLII
                     RSDRNEPNKNQEVRLNNIAD"
BASE COUNT           98 a           75 c           72 g           63 t
ORIGIN      
        1 tcaatcgtac cgattccggc gaacccatcg gttttgagtt taataatgcg gacaataccg
       61 taaccggcaa tgcggatatt acggtcaaac ctgccgaccc ttcacagcat tcgcgcccga
      121 aagggctgat tatccggagc gaccgtaacg aaccaaacaa aaaccaagaa gttcgcttaa
      181 ataatatagc ggattaacaa aaatcaggac aaggcggcga gccgcagaca gtacaaatag
      241 tacggcaagg cgaggcaacg ccgtaccggt ttaaatttaa tccactctat atggctggtg
      301 gagtttat
//
LOCUS       DAXFZM010000205          293 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.208, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000205 DAXFZM010000000
VERSION     DAXFZM010000205.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 293)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 293)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..293
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.208"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..>293
                     /locus_tag="ACFJAG_002177"
     CDS             <1..>293
                     /locus_tag="ACFJAG_002177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="opacity family porin"
                     /protein_id="HFC3981364.1"
                     /translation="RNIRTHSVHPRVSVGYDFGSWRIAADYARYRKWKESNYSKKVTE
                     FKHQNGTKKEDKTEHQGNGSFHATSSLGLSAIYDFKLNDKFKPYIGVRVAYGH"
BASE COUNT           97 a           77 c           59 g           60 t
ORIGIN      
        1 tcagaaacat ccgtacgcat tccgtccacc ccagggtgtc ggtcggctac gacttcggca
       61 gctggaggat agcggcagat tatgcccgtt acagaaagtg gaaagaaagt aattattcta
      121 aaaaagttac tgaatttaaa caccaaaacg gcaccaaaaa agaagacaaa acagaacatc
      181 aaggaaacgg cagcttccac gccacttctt ctctcggctt atcagccatt tacgatttca
      241 aactcaacga taaattcaaa ccctatatcg gcgtgcgcgt cgcctacgga cac
//
LOCUS       DAXFZM010000206          282 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.209, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000206 DAXFZM010000000
VERSION     DAXFZM010000206.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 282)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 282)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..282
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.209"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..210
                     /locus_tag="ACFJAG_002178"
     CDS             <1..210
                     /locus_tag="ACFJAG_002178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981365.1"
                     /translation="FNAVPRKEGGVYYYKSCKTCRNKAVRQKRAAAGAGAMTAARLHG
                     YIRAAHAACPILGAGLWTQPAGECA"
     gene            201..>282
                     /locus_tag="ACFJAG_002179"
     CDS             201..>282
                     /locus_tag="ACFJAG_002179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017147288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RusA family crossover junction
                     endodeoxyribonuclease"
                     /protein_id="HFC3981366.1"
                     /translation="MRVIRLILPYPVSANRYWRIWRNRAVR"
BASE COUNT           59 a           85 c           95 g           43 t
ORIGIN      
        1 tttaatgccg tcccgcgcaa ggaagggggg gtctattatt acaaatcgtg caaaacctgc
       61 cgcaacaagg cagtccggca aaagcgcgcg gcggcgggag ccggcgcgat gacggcggca
      121 aggctgcacg gatacatccg cgccgcgcac gccgcctgcc cgatattggg cgccggcctg
      181 tggacgcaac cggcagggga atgcgcgtga tacgccttat cctgccttac cccgtatcgg
      241 caaaccgata ttggcggatt tggcgcaaca gggcggtcag ga
//
LOCUS       DAXFZM010000207          272 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.210, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000207 DAXFZM010000000
VERSION     DAXFZM010000207.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 272)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 272)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..272
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.210"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..>272)
                     /locus_tag="ACFJAG_002180"
     CDS             complement(<1..>272)
                     /locus_tag="ACFJAG_002180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003755953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HFC3981367.1"
                     /translation="HYLTRPAGFSDCQRVCPDETGFDRRLFRPYARSLKGQMAKARIS
                     GKRYRRLSLVSAQVGNRPIAPMVCQNTVAGVFFEARFQQCLLPALA"
BASE COUNT           62 a           79 c           76 g           55 t
ORIGIN      
        1 gagccaatgc gggcagtagg cattgctgaa accgcgcttc aaaaaagacc ccggccaccg
       61 tattttgaca aaccatcgga gcaatcggcc ggttgccgac ttgtgcggac accaaagata
      121 agcgccggta tcttttccca cttatccgcg ctttcgccat ttgccctttc aggctgcggg
      181 cataggggcg gaacaggcgg cggtcgaatc ctgtttcatc cggacaaacg cgttggcagt
      241 cggaaaatcc ggccggccgt gtcaaataat gc
//
LOCUS       DAXFZM010000208          263 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.211, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000208 DAXFZM010000000
VERSION     DAXFZM010000208.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 263)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 263)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..263
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.211"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
BASE COUNT           80 a           64 c           61 g           58 t
ORIGIN      
        1 aactccgccc catccgtaga ggctgataac agtcatgagg ggtatggata cagcgatgaa
       61 gcagtgcgac aacatagaca agggcaacct tgattcacac tgccataacc gcttgctgcc
      121 aaggaaaaca aaatgaattt gcctattcaa aaattcatga tgctgtttgc agcggcaata
      181 tcgttgctgc aaatccccat tagtcatgcg aacggtttgg atgcccgttt gcgcgatgat
      241 atgcaggcaa aacactacga acc
//
LOCUS       DAXFZM010000209          258 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.212, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000209 DAXFZM010000000
VERSION     DAXFZM010000209.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 258)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 258)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.212"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
BASE COUNT           94 a           72 c           60 g           32 t
ORIGIN      
        1 gaccaagccc cgaagaaatc aaataccggc aaagcccgga aaccgccgaa acacggcgga
       61 tgaccgaaaa acaggcagaa ggccacatta aaagcattat caggtaacgc cgccgcgcaa
      121 ggcataaaac agcgcgagac cgatagacga aacgaccttt aacaggagac cgaaaatgtc
      181 attgatttta agtgtgaaag acgaaagcaa tttcaaacca tgcccggcag gcagccatca
      241 cgccacctgc atccgcat
//
LOCUS       DAXFZM010000210          244 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.213, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000210 DAXFZM010000000
VERSION     DAXFZM010000210.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 244)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 244)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..244
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.213"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..>244
                     /locus_tag="ACFJAG_002181"
     CDS             <1..>244
                     /locus_tag="ACFJAG_002181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="opacity family porin"
                     /protein_id="HFC3981368.1"
                     /translation="TFHAVSSLGLSTVYDFRVNDKFKPYIGVRVGYGHVRHGIDSTKK
                     TKNTLTAYHGNGRGSTYYDDIEPEKNQKNTYRQNRSS"
BASE COUNT           79 a           62 c           47 g           56 t
ORIGIN      
        1 cacattccac gccgtttctt ctctcggctt gtcaaccgtt tacgatttca gagtcaacga
       61 taaattcaaa ccctatatcg gtgtgcgtgt cggctacgga cacgtcagac acggtatcga
      121 ttcgactaaa aaaacgaaaa atactcttac cgcctaccat ggtaatggca ggggatctac
      181 gtattatgat gatatagagc cggaaaaaaa ccaaaaaaac acttatcgcc aaaaccgcag
      241 cagc
//
LOCUS       DAXFZM010000211          239 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.214, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000211 DAXFZM010000000
VERSION     DAXFZM010000211.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 239)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 239)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..239
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.214"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            138..>239
                     /locus_tag="ACFJAG_002182"
     CDS             138..>239
                     /locus_tag="ACFJAG_002182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HFC3981369.1"
                     /translation="MNTLQKGFTLIELMIVIAIVGILAAVALPAYQDY"
BASE COUNT           68 a           60 c           46 g           65 t
ORIGIN      
        1 acctcaaaac ataaaatcgg cacgaatctt gctttataat acgcagttgt cgcaacaaaa
       61 aaccgatggt taaatacatt gcatgatgcc gatggcgtaa gcctgaggca tttccccttt
      121 caattaggag taattttatg aatacccttc aaaaaggctt tacccttatc gagctgatga
      181 ttgtgatcgc catcgtcggc attttggcgg cagtcgccct tcccgcctac caagactac
//
LOCUS       DAXFZM010000212          227 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.215, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000212 DAXFZM010000000
VERSION     DAXFZM010000212.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 227)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 227)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..227
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.215"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
BASE COUNT           59 a           51 c           72 g           45 t
ORIGIN      
        1 aataaccccg acggcgcacg gtccgtacca tccttagcgg acgcggtgcg caattaaaac
       61 cttttaaatt aaggaaatag aaatgaagac aaggaatatt gcgtttaagt tcgcggtatt
      121 ggcggcggta ttggcggcgg gctatgcctt cggattcgcc aagggaggcg gaagccgtac
      181 ggcaaaggga aaacccgccg gtattgcggc aatgcgcatg gcgttgg
//
LOCUS       DAXFZM010000213          219 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.216, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000213 DAXFZM010000000
VERSION     DAXFZM010000213.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 219)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 219)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..219
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.216"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(85..>219)
                     /locus_tag="ACFJAG_002183"
     CDS             complement(85..>219)
                     /locus_tag="ACFJAG_002183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HFC3981370.1"
                     /translation="IKRLEEKKKPKKVIIAALMRKLAVIAYHVHKKGGDYDPSRYKSA
                     "
BASE COUNT           53 a           46 c           42 g           78 t
ORIGIN      
        1 attgaatttc aatatttgaa aattcaccgg atttcagacg cggcaaagca ggcatttaaa
       61 aaatgccttt tttcctttcg ggatttacgc cgatttgtaa cgcgatggat cgtaatctcc
      121 gcctttctta tgtacgtgat acgcaataac ggcgagttta cgcatcaatg ctgcgatgat
      181 gactttttta ggcttcttct tttcttccag ccttttgat
//
LOCUS       DAXFZM010000214          215 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.217, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000214 DAXFZM010000000
VERSION     DAXFZM010000214.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 215)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 215)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..215
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.217"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
BASE COUNT           63 a           45 c           60 g           47 t
ORIGIN      
        1 tgaatcctac cgagtttctg aaagcgcgta tcgccgaatg ggaagccaaa agcaaagagg
       61 cgggcggaaa cgccgatttt aaagcttttg agtttgccga aagcgaaatc aaaaactaca
      121 aagcgatgtt gaaaacttat gaacggcctg attaaaaacc cgaagctgat tgcggtgtcg
      181 gtttgcgccg tgttcgttgc cggcgcgtgg caata
//
LOCUS       DAXFZM010000215          208 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.denovo.218, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000215 DAXFZM010000000
VERSION     DAXFZM010000215.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 208)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 208)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..208
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.denovo.218"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..>208
                     /locus_tag="ACFJAG_002184"
     CDS             <1..>208
                     /locus_tag="ACFJAG_002184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIR2 family protein"
                     /protein_id="HFC3981371.1"
                     /translation="IKTDNFSQIYKALAELTLPISAMNVRKFQSIAKEIYTGGNIKVS
                     FTEDMDNLNNSDKVVAIGSTKTISY"
BASE COUNT           81 a           35 c           32 g           60 t
ORIGIN      
        1 atcaaaacag ataacttctc acaaatttat aaagctcttg cagaactaac actaccaatc
       61 tcagctatga atgtacgtaa atttcaatct atagcaaagg agatttatac tggcggtaac
      121 attaaagtta gctttacgga agatatggac aatttaaata atagcgataa agtggttgct
      181 attggttcaa ctaaaactat cagctaca
//
LOCUS       DAXFZM010000216         5593 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.guided.104, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000216 DAXFZM010000000
VERSION     DAXFZM010000216.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5593)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5593)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5593
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.guided.104"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(266..523)
                     /locus_tag="ACFJAG_002185"
     CDS             complement(266..523)
                     /locus_tag="ACFJAG_002185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981372.1"
                     /translation="MSEIVTIIFYNVLILSLIAISVYVYLKWQHKKRIDRMLDEMEKS
                     YSKFADHKANERMQKRIDEYDKRHPLKAFKRKFKDKIKWLL"
     gene            complement(526..822)
                     /locus_tag="ACFJAG_002186"
     CDS             complement(526..822)
                     /locus_tag="ACFJAG_002186"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC3981373.1"
                     /translation="MASEKLTRLEQQQADLQRKQDEIKAKIRAIKSKEQAEKRKKATH
                     YKVLLGAFWLNEIINNPLLDVDRNFPKLRKFINDDKKFDELSAFINEEIEKGKK"
     gene            991..2427
                     /locus_tag="ACFJAG_002187"
     CDS             991..2427
                     /locus_tag="ACFJAG_002187"
                     /inference="COORDINATES: protein motif:HMM:NF015354.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MobA/MobL family protein"
                     /protein_id="HFC3981374.1"
                     /translation="MAIYHLNVRYCSKSKGQSAQAKNDYINRNDKYSKRLDDLQFSGY
                     GNMPKFAEDNPQEFWRLSDIYERANARVCTEIEFALPRELTLEQQQKLVSSFIENTVD
                     SGSNKLPYSFAIHTDKNNHNPHCHLIFSERQLDGIDRTAEQFFKRANTKSPEKGGAMK
                     TADFRDREFIQSVRKTWREQANQALEQYGYAARIDERSYKEQGIEQAPRARIDRVTWQ
                     ELNRLEQEERQIVQELALKGQEINKEKSYLQKIEEKQAQGMGKYESKFAAAFSKLSES
                     ALKHDLSNEKEKDSKIHTQEEKVPQNRIQGLSQADFDQFLIDEWLPQIEKYVKAQEKR
                     DGMEVEITQYDKDLQRIQGDYNKLTDKNQGFLGLWETKEQKAKKKELEDEYKHTAEQR
                     NAKSQELAEYSQKIKAYEQKTLEPINEKIAKYQADNPEIKMRSLGFVKKIKAQGAYKA
                     AQERMEREKQHQQEKQQRHLERESGLSL"
     gene            2668..3135
                     /locus_tag="ACFJAG_002188"
                     /pseudo
     CDS             2668..3135
                     /locus_tag="ACFJAG_002188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005687610.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
     gene            3318..4178
                     /locus_tag="ACFJAG_002189"
     CDS             3318..4178
                     /locus_tag="ACFJAG_002189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032489893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="broad-spectrum class A beta-lactamase TEM-1"
                     /protein_id="HFC3981375.1"
                     /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGY
                     IELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVE
                     YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRL
                     DRWEPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPL
                     LRSALPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIA
                     EIGASLIKHW"
     gene            complement(4273..4440)
                     /locus_tag="ACFJAG_002190"
     CDS             complement(4273..4440)
                     /locus_tag="ACFJAG_002190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="antitoxin VbhA family protein"
                     /protein_id="HFC3981376.1"
                     /translation="MNSNFITETEKLSREKAVRAAIDNNRLEGLEPSQEFIDRGLTLS
                     GTKTHVKGFWS"
     gene            complement(4480..5466)
                     /locus_tag="ACFJAG_002191"
     CDS             complement(4480..5466)
                     /locus_tag="ACFJAG_002191"
                     /inference="COORDINATES: protein motif:HMM:NF013235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation protein"
                     /protein_id="HFC3981377.1"
                     /translation="MPNDLVVVKANSLIEANYRLSIDEIRILALTIGTMDPKSNQKIF
                     DFTVADFVREFPEISQDNAYKQIQAAIKRIYDRSVKTEDKDRVTEFRWVSSRTYFKKE
                     GRFRIAMTDEVMPYLTQLKGQFTQYQLKHIAYFNSVHSIRIYELITQYRSVGSREITV
                     EKLKEWLQVENKYPRFNSLNQRVLEPAITEINEKSDLVVEVEQIKRGRTIHSLNFVIG
                     SKKRTAQKIEEVAKRPVFPHKNKYGKFVKLDKQNPKMSNHEYGLWARDCLKILEDHYT
                     DITKVTNEDLRNYWVFLAGNDSNRSKLGSKSDFLNELKKRGYKLVDCELVKI"
BASE COUNT         1747 a         1114 c         1106 g         1626 t
ORIGIN      
        1 aacaggaaat ttgttgtcgt ataacaggaa atttgttgtc gtataagttt gtaacttatt
       61 gattttactg gttttaaaaa cgccgaaaac aagtaaaaaa caaaaatata aaaatatagg
      121 gactttcgtc ccttttttgg gctttcagcc ctaatttttt cttttttcag gattaaaaat
      181 tacaaaaccc ttacagagca agtaaacttg tttgcttgtt ctgcaagggt tcagcaaccg
      241 tagccgtcag gcgtagggcg gtagcctata aaagccattt aattttatct ttaaacttcc
      301 ttttaaatgc tttgagtggg tgtcttttat cgtactcatc aatccttttt tgcattcttt
      361 cgtttgcttt gtgatcggca aattttgaat aagatttttc catctcatct aacattctat
      421 caatccgttt tttatgttgc catttcaggt aaacataaac acttatagca attaaagaca
      481 atatcaatac attgtaaaaa atgattgtta caatttcgct cacagttatt ttttaccttt
      541 ttcaatttct tcattgataa atgcactcaa ttcatcaaat ttcttgtcat cattgataaa
      601 tttacgcaac ttagggaagt ttctatctac atctaaaaga gggttattta ttatttcatt
      661 tagccaaaaa gcccctaata aaaccttgta atgcgtagct ttcttacgct tttctgcttg
      721 ttcttttgac ttaatcgcac gaattttcgc tttgatttcg tcctgcttgc gttgtaaatc
      781 tgcttgttgc tgttccaatc ttgtaagttt ttcgcttgcc atactagcca ctttatatag
      841 ttagaaatta tcgttatttt attcagtagg tgctaggctt gcaagtgttc tgttcattac
      901 gttaaaataa cgtaatgccc acttatcagt ttctcttcga gaaactggtg ggcaagcgta
      961 ccgcttgacc gtttcgcaat actcaacact atggcaatct atcatttaaa cgttcgctat
     1021 tgcagtaaaa gcaaagggca atcagctcaa gccaaaaacg actacatcaa ccgcaatgat
     1081 aaatattcaa agcggttaga tgatttacag ttttcaggct atggtaatat gccaaaattt
     1141 gccgaagata atccgcaaga attttggcga ttgtcagata tttacgagcg agctaatgcc
     1201 cgagtttgta ctgaaattga atttgcttta cctagagaat taaccctaga acaacagcaa
     1261 aaattagtaa gttcgtttat agaaaatacg gttgatagcg gtagcaataa actaccctac
     1321 tctttcgcta tccataccga taaaaataat cataatcccc attgtcattt gatattttca
     1381 gaacgccaac ttgacggcat agaccgtaca gccgagcagt tttttaaacg tgctaatact
     1441 aaatccccag aaaagggcgg agcgatgaaa acggcagatt ttcgagatcg tgagtttatc
     1501 caatctgtcc gaaaaacgtg gagagagcaa gctaatcaag ccttagagca atacggatat
     1561 gccgcacgaa ttgacgaacg tagctacaag gaacaaggca tagagcaagc cccaagagca
     1621 agaattgaca gggtaacgtg gcaagaattg aaccgattag agcaagaaga acgccaaatc
     1681 gtgcaagagc ttgcacttaa aggacaagaa attaacaaag aaaaatccta cttgcagaaa
     1741 atcgaagaaa aacaggctca aggaatgggc aaatatgaat ccaaattcgc agctgcgttt
     1801 tctaaattat cggaaagtgc cctaaaacac gatttaagca acgaaaaaga aaaagacagt
     1861 aaaatacaca ctcaagaaga aaaagtgcct caaaatcgca ttcaggggct ttctcaagca
     1921 gattttgatc agtttttaat tgatgaatgg ctacctcaaa tagaaaaata cgttaaagcc
     1981 caagaaaagc gggacggaat ggaagtagag atcacgcaat acgacaagga tttacagcgt
     2041 attcagggag actataacaa gctcacagat aaaaatcagg gttttctcgg tttatgggaa
     2101 actaaagagc aaaaagcaaa gaaaaaagag cttgaagatg aatacaaaca tacagcagag
     2161 caacggaacg ctaaaagcca agaattagcc gagtatagcc aaaaaataaa agcatacgaa
     2221 cagaaaacgc tagagccaat caacgagaag attgccaaat atcaagctga caaccctgaa
     2281 ataaaaatgc ggagcttagg atttgtgaaa aaaattaagg ctcaaggggc atataaagcg
     2341 gctcaagagc gaatggagcg agaaaaacag caccaacagg aaaaacaaca gagacattta
     2401 gagcgagaga gtggtttgag cttgtagcta acgccctacg cctacggctt cggttgttca
     2461 acccttaaag aactcgcaac aagttgcgag ttctttaagg gttcgcaata aaaacaaccg
     2521 ctaaacattt ctgcccagcg gttgaaaatt tacctattca ccattacaac aatgatcaag
     2581 caggaaattt ttttgattgc cgtaaatgtc cgtatatcta gttgaggcac aacccgccaa
     2641 agtcattgcc ccaaccagaa cggcgataac cgtatattta ccgataaggc atccggcagt
     2701 tcaacagacc gggaagggct ggatttgctg aggatgaagg tggaggaagg tgatgtcatt
     2761 ctggttaaga agctcgaccg tcttggccgc gacactgccg atatgatcca actgataaag
     2821 gaatttgacg ctcagggcgt ggcagtccgg ttcattgatg acgggatcag taccgacggt
     2881 gatatggggc aaatggtggt caccatcctg tcggctgtgg cacaggctga acgccggagg
     2941 atcctagaac gcacgaatga gggccgacag gaagcaaagc tgaaaggaat caaatttggc
     3001 cgcaggcgta ccgtggacag gaacgtcgtg ctgacgcttc atcagaaggg cactggtgca
     3061 acggaaattg ctcatcagct cagtattgcc cgctccacgg tttataaaat tcttgaagac
     3121 gaaagggcct cgtgatacgc ttatttttat aggttaatgt catgataata atggtttctt
     3181 agacgtcagg tggcactttt cggggaaatg tgcgcggaac ccctatttgt ttatttttct
     3241 aaatacattc aaatatgtat ccgctcatga gacaataacc ctggtaaatg cttcaataat
     3301 attgaaaaag gaagagtatg agtattcaac attttcgtgt cgcccttatt cccttttttg
     3361 cggcattttg ccttcctgtt tttgctcacc cagaaacgct ggtgaaagta aaagatgctg
     3421 aagatcagtt gggtgcacga gtgggttaca tcgaactgga tctcaacagc ggtaagatcc
     3481 ttgagagttt tcgccccgaa gaacgttttc caatgatgag cacttttaaa gttctgctat
     3541 gtggtgcggt attatcccgt gttgacgccg ggcaagagca actcggtcgc cgcatacact
     3601 attctcagaa tgacttggtt gagtactcac cagtcacaga aaagcatctt acggatggca
     3661 tgacagtaag agaattatgc agtgctgcca taaccatgag tgataacact gctgccaact
     3721 tacttctgac aacgatcgga ggaccgaagg agctaaccgc ttttttgcac aacatggggg
     3781 atcatgtaac tcgccttgat cgttgggaac cggagctgaa tgaagccata ccaaacgacg
     3841 agcgtgacac cacgatgcct gcagcaatgg caacaacgtt gcgcaaacta ttaactggcg
     3901 aactacttac tctagcttcc cggcaacaat taatagactg gatggaggcg gataaagttg
     3961 caggaccact tctgcgctcg gcccttccgg ctggctggtt tattgctgat aaatctggag
     4021 ccggtgagcg tgggtctcgc ggtatcattg cagcactggg gccagatggt aagccctccc
     4081 gtatcgtagt tatctacacg acggggagtc aggcaactat ggatgaacga aatagacaga
     4141 tcgctgagat aggtgcctca ctgattaagc attggtaact gtcagaccaa gtttactcat
     4201 atatacttta gattgattta aaacttcatt tttaatttaa aaggatctag gtgaagatcc
     4261 tttttgataa tctcatgacc aaaatccctt aacgtgagtt ttcgttccac tgagcgtcag
     4321 acccctatct ataaactctt ggcttggttc taatccctct aaacgattat tatcaatagc
     4381 cgctctaacc gctttttctc ggcttaattt ttctgtctct gttataaaat tgctattcat
     4441 cttgttcttc ttcaaaaaaa agttaagtaa aatacctacc taaattttta ctagttcgca
     4501 atctacgagc ttataacctc gttttttcaa ttcatttaaa aaatcagatt ttgagcctaa
     4561 ttttgatcta ttgctatcgt tacccgctag aaatacccag taattacgca aatcttcatt
     4621 ggtaactttc gtaatatcgg tgtaatgatc ttcgagtatt tttaagcaat ctctagccca
     4681 taaaccgtac tcgtgattgc tcatcttagg gttttgctta tcgagtttga cgaacttccc
     4741 atacttgttt ttatgtggaa atactggccg ttttgcaact tcttcaattt tttgagctgt
     4801 tcgtttttta ctaccaatca caaaatttaa agagtgaata gtacgcccac gcttgatttg
     4861 ttcaacctca acgactaaat cagatttctc gttaatctca gttattgcag gttccaaaac
     4921 acgttgattt aatgaattaa atctagggta tttattttca acctgaagcc attcttttag
     4981 tttttctact gtaatttcac gactaccaac agagcgatat tgtgtaatta gctcataaat
     5041 tcgaattgaa tgtacactgt tgaaataagc gatatgtttg agttgatatt gcgtgaattg
     5101 ccctttaagt tgcgttaggt atggcataac ttcatcagtc attgcaattc taaaacgccc
     5161 ctctttcttg aaatatgttc tagaggaaac ccaacgaaat tcagttacac ggtctttatc
     5221 ttcagtttta acacttcggt cataaatccg ttttatagcc gcctgaattt gcttataggc
     5281 gttatcttgg cttatttctg gaaactcacg gacaaaatca gccaccgtaa aatcaaaaat
     5341 cttttgatta gatttcggat ccatagtccc aatagttaaa gctaaaattc tgatttcatc
     5401 aatactcaat cggtaattgg cttcaataag gctattagcc tttacaacaa ctaaatcatt
     5461 tggcataaga caacaaattt cctgtttaaa acaacaagca aaatatacct gttgtttata
     5521 tataaaacaa caagtatttt cttaaaagtt gtctataaca ggaaatttgt tgtcgtataa
     5581 caggaaattt gtt
//
LOCUS       DAXFZM010000217         2665 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA97
            SAMEA113994208-rid23199883.guided.138, whole genome shotgun
            sequence.
ACCESSION   DAXFZM010000217 DAXFZM010000000
VERSION     DAXFZM010000217.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994208
            Sequence Read Archive: ERR11669521
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2665)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2665)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363899.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363899.1
            Genome Coverage       :: 76x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/18/2024 00:56:19
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,194
            CDSs (total)                      :: 2,139
            Genes (coding)                    :: 1,953
            CDSs (with protein)               :: 1,953
            Genes (RNA)                       :: 55
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 48
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 186
            CDSs (without protein)            :: 186
            Pseudo Genes (ambiguous residues) :: 0 of 186
            Pseudo Genes (frameshifted)       :: 107 of 186
            Pseudo Genes (incomplete)         :: 86 of 186
            Pseudo Genes (internal stop)      :: 43 of 186
            Pseudo Genes (multiple problems)  :: 48 of 186
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2665
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994208-rid23199883.guided.138"
                     /isolate="MA97"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            24..1943
                     /gene="tet(M)"
                     /locus_tag="ACFJAG_002192"
     CDS             24..1943
                     /gene="tet(M)"
                     /locus_tag="ACFJAG_002192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011117014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline resistance ribosomal protection
                     protein Tet(M)"
                     /protein_id="HFC3981378.1"
                     /translation="MKIINIGVLAHVDAGKTTLTESLLYNSGAITELGSVDKGTTRTD
                     NTLLERQRGITIQTGITSFQWENTKVNIIDTPGHMDFLAEVYRSLSVLDGAILLISAK
                     DGVQAQTRILFHALRKMGIPTIFFINKIDQNGIDLSTVYQDIKEKLSAEIVIKQKVEL
                     YPNMCVTNFTESEQWDTVIEGNDDLLEKYMSGKSLEALELEQEESIRFQNCSLFPLYH
                     GSAKSNIGIDNLIEVITNKFYSSTHRGPSELCGKVFKIEYSEKRQRLAYIRLYSGVLH
                     LRDSVRISEKEKIKITEMYTSINGELCKIDKAYSGEIVILQNEFLKLNSVLGDTKLLP
                     QRKKIENPHPLLQTTVEPSKPEQREMLLDALLEISDSDPLLRYYVDSTTHEIILSFLG
                     KVQMEVISALLQEKYHVEIELKEPTVIYMERPLKNAEYTIHIEVPPNPFWASIGLSVS
                     PLPLGSGMQYESSVSLGYLNQSFQNAVMEGIRYGCEQGLYGWNVTDCKICFKYGLYYS
                     PVSTPADFRMLAPIVLEQVLKKAGTELLEPYLSFKIYAPQEYLSRAYTDAPKYCANIV
                     DTQLKNNEVILSGEIPARCIQEYRSDLTFFTNGRSVCLTELKGYHVTTGEPVCQPRRP
                     NSRIDKVRYMFNKIT"
     gene            2062..2229
                     /locus_tag="ACFJAG_002193"
     CDS             2062..2229
                     /locus_tag="ACFJAG_002193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002319681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine-rich KTR domain-containing protein"
                     /protein_id="HFC3981379.1"
                     /translation="MCPVCGNKTRLKIREDTELKKFPLYCPKCRQENLIEIKQFKVTV
                     ITEPDAKTQSR"
     gene            complement(2289..2642)
                     /locus_tag="ACFJAG_002194"
     CDS             complement(2289..2642)
                     /locus_tag="ACFJAG_002194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001227347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HFC3981380.1"
                     /translation="MRKKEDKYDFRAFGLAIKEARLKRGLTREQVGALIEIDPRYLTN
                     IENKGQHPSIQVLYDLVSLLHVSVDEFFLPANNLVKSTRRLQIEKYMDSFTDKELSLM
                     ESLASGINEARNIED"
BASE COUNT          898 a          418 c          528 g          821 t
ORIGIN      
        1 gtttttgaat ggaggaaaat cacatgaaaa ttattaatat tggagtttta gctcatgttg
       61 atgcaggaaa aactacctta acagaaagct tattatataa cagtggagcg attacagaat
      121 taggaagcgt ggacaaaggt acaacgagga cggataatac gcttttagaa cgtcagagag
      181 gaattacaat tcagacagga ataacctctt ttcagtggga aaatacgaag gtgaacatca
      241 tagacacgcc aggacatatg gatttcttag cagaagtata tcgttcatta tcagttttag
      301 atggggcaat tctactgatt tctgcaaaag atggcgtaca agcacaaact cgtatattat
      361 ttcatgcact taggaaaatg gggattccca caatcttttt tatcaataag attgaccaaa
      421 atggaattga tttatcaacg gtttatcagg atattaaaga gaaactttct gccgaaattg
      481 taatcaaaca gaaggtagaa ctgtatccta atatgtgtgt gacgaacttt accgaatctg
      541 aacaatggga tacggtaata gagggaaacg atgacctttt agagaaatat atgtccggta
      601 aatcattaga agcattggaa ctcgaacaag aggaaagcat aagatttcag aattgttctc
      661 tgttccctct ttatcatgga agtgcaaaaa gtaatatagg gattgataac cttatagaag
      721 ttattactaa taaattttat tcatcaacac atcgaggtcc gtctgaactt tgcggaaaag
      781 ttttcaaaat tgagtattcg gaaaaaagac agcgtcttgc atatatacgt ctttatagtg
      841 gcgtactgca tttgcgagat tcggttagaa tatcggaaaa ggaaaaaata aaaattacag
      901 aaatgtatac ttcaataaat ggtgaattat gtaaaattga taaggcttat tccggggaaa
      961 ttgttatttt gcagaatgag tttttgaagt taaatagtgt tcttggagat acaaagctat
     1021 tgccacagag aaaaaagatt gaaaatccgc accctctact acaaacaact gttgaaccga
     1081 gtaaacctga acagagagaa atgttgcttg atgccctttt ggaaatctca gatagtgatc
     1141 cgcttctacg atattacgtg gattctacga cacatgaaat tatactttct ttcttaggga
     1201 aagtacaaat ggaagtgatt agtgcactgt tgcaagaaaa gtatcatgtg gagatagaac
     1261 taaaagagcc tacagtcatt tatatggaga gaccgttaaa aaatgcagaa tataccattc
     1321 acatcgaagt gccgccaaat cctttctggg cttccattgg tttatctgta tcaccgcttc
     1381 cgttgggaag tggaatgcag tatgagagct cggtttctct tggatactta aatcaatcat
     1441 ttcaaaatgc agttatggaa gggatacgct atggttgcga acaaggatta tatggttgga
     1501 atgtgacgga ctgtaaaatc tgttttaagt atggcttata ctatagccct gttagtaccc
     1561 cagcagattt tcggatgctt gctcctattg tattggaaca agtcttaaaa aaagctggaa
     1621 cagaattgtt agagccatat cttagtttta aaatttatgc gccacaggaa tatctttcac
     1681 gagcatacac cgatgctcct aaatattgtg cgaacatcgt agacactcaa ttgaaaaata
     1741 atgaggtcat tcttagtgga gaaatccctg ctcggtgtat tcaagaatat cgtagtgatt
     1801 taactttctt tacaaatgga cgtagtgttt gtttaacaga gttaaaaggg taccatgtta
     1861 ctaccggtga acctgtttgc cagccccgtc gtccaaatag tcggatagat aaagtacgat
     1921 atatgttcaa taaaataact tagtgtattt tatgttgtta tataaatatg gtttcttgtt
     1981 aaataagatg aaatattttt taataaagat ttgaattaaa gtgtaaagga ggagatagtt
     2041 attataaact acaagtggat attgtgtcct gtatgtggaa ataaaacacg attaaagata
     2101 agggaagata ctgaattaaa aaaattcccc ctctattgtc cgaaatgcag acaagaaaat
     2161 ttaattgaaa taaagcagtt caaagtaact gtgattacag agccagacgc aaagacgcag
     2221 agccgataaa atgagattaa tacaatctca ttttatcggc tctttccgtt atgtatggat
     2281 tcttttaatt agtcttcgat gtttcttgct tcgttgatac cgctggctaa agattccatt
     2341 aaggatagtt ctttgtctgt aaagctatcc atgtatttct ctatctgtaa tcgtcgggtg
     2401 ctttttacca agttattagc aggtaagaaa aattcatcaa cggaaacatg aagtaacgat
     2461 acaaggtcat aaagaacttg tatgctgggg tgttgccctt tattttcaat attagttaag
     2521 taccgtgggt caatttcaat caatgctccc acttgttcac gagttaaacc tcgtttcaat
     2581 cgagcttctt taatggctaa accaaaggct ctaaaatcat atttatcttc ttttttacgc
     2641 atagtagacc acctctatac atttt
//
